BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14686
(306 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195113003|ref|XP_002001061.1| GI10577 [Drosophila mojavensis]
gi|193917655|gb|EDW16522.1| GI10577 [Drosophila mojavensis]
Length = 359
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/182 (59%), Positives = 126/182 (69%), Gaps = 20/182 (10%)
Query: 29 NKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFG 88
N +D SEPE +RKLFIGGLDYRT DD+LKA FE+WG+IVDVVVMKDP TKRSRGFG
Sbjct: 12 NGQHDDDSISEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFG 71
Query: 89 FITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ 138
FITYS S MVDEA RPH+IDGRVVE KRAVPR+ VK V ++ ++
Sbjct: 72 FITYSHSSMVDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDE 131
Query: 139 M---DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVIN 195
DYF YG I +N+V +KETG KRGFAF+EFDDYD VDK+VL K Q +N
Sbjct: 132 QSLRDYFQHYGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQK-------QHQLN 184
Query: 196 GE 197
G+
Sbjct: 185 GK 186
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 56/82 (68%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ SL+ +F+ +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 116 TVKKLFVGALKDDHDEQSLRDYFQHYGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKV 175
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+++G++V+ K+A+P++
Sbjct: 176 VLQKQHQLNGKMVDVKKALPKQ 197
>gi|195391065|ref|XP_002054186.1| GJ22934 [Drosophila virilis]
gi|194152272|gb|EDW67706.1| GJ22934 [Drosophila virilis]
Length = 355
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/182 (58%), Positives = 127/182 (69%), Gaps = 20/182 (10%)
Query: 29 NKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFG 88
N +D +EPE +RKLFIGGLDYRT DD+LKA FE+WG+IVDVVVMKDP TKRSRGFG
Sbjct: 12 NGQHDDDSITEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFG 71
Query: 89 FITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ 138
FITYS S MVDEA RPH+IDGRVVE KRAVPR+ VK V ++ ++
Sbjct: 72 FITYSHSSMVDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDE 131
Query: 139 M---DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVIN 195
DYF YG+I +N+V +KETG KRGFAF+EFDDYD VDK+VL K Q +N
Sbjct: 132 QSLRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQK-------QHQLN 184
Query: 196 GE 197
G+
Sbjct: 185 GK 186
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 56/82 (68%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ SL+ +F+ +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 116 TVKKLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKV 175
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+++G++V+ K+A+P++
Sbjct: 176 VLQKQHQLNGKMVDVKKALPKQ 197
>gi|195055059|ref|XP_001994440.1| GH17116 [Drosophila grimshawi]
gi|193892203|gb|EDV91069.1| GH17116 [Drosophila grimshawi]
Length = 379
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 107/182 (58%), Positives = 127/182 (69%), Gaps = 20/182 (10%)
Query: 29 NKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFG 88
N +D +EPE +RKLFIGGLDYRT DD+LKA FE+WG+IVDVVVMKDP TKRSRGFG
Sbjct: 12 NGQHDDDSITEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFG 71
Query: 89 FITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ 138
FITYS S MVDEA RPH+IDGRVVE KRAVPR+ VK V ++ ++
Sbjct: 72 FITYSHSSMVDEAQKARPHKIDGRVVEPKRAVPRQEIDSPNAGATVKKLFVGALKDDHDE 131
Query: 139 M---DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVIN 195
DYF YG+I +N+V +KETG KRGFAF+EFDDYD VDK+VL K Q +N
Sbjct: 132 QSLRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQK-------QHQLN 184
Query: 196 GE 197
G+
Sbjct: 185 GK 186
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 56/82 (68%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ SL+ +F+ +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 116 TVKKLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKV 175
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+++G++V+ K+A+P++
Sbjct: 176 VLQKQHQLNGKMVDVKKALPKQ 197
>gi|195158385|ref|XP_002020072.1| GL13791 [Drosophila persimilis]
gi|194116841|gb|EDW38884.1| GL13791 [Drosophila persimilis]
Length = 431
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 126/182 (69%), Gaps = 20/182 (10%)
Query: 29 NKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFG 88
N D +EPE +RKLFIGGLDYRT DD+LKA FE+WG+IVDVVVMKDP TKRSRGFG
Sbjct: 11 NSNGHDDDITEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFG 70
Query: 89 FITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ 138
FITYS S M+DEA RPH+IDGRVVE KRAVPR+ VK V ++ ++
Sbjct: 71 FITYSHSTMIDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDE 130
Query: 139 M---DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVIN 195
DYF +G+I +N+V +KETG KRGFAF+EFDDYD VDK+VL K Q +N
Sbjct: 131 QSLRDYFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQK-------QHQLN 183
Query: 196 GE 197
G+
Sbjct: 184 GK 185
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 56/82 (68%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ SL+ +F+ +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 115 TVKKLFVGALKDDHDEQSLRDYFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKV 174
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+++G++V+ K+A+P++
Sbjct: 175 VLQKQHQLNGKMVDVKKALPKQ 196
>gi|198450175|ref|XP_002137048.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
gi|198130926|gb|EDY67606.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/182 (57%), Positives = 126/182 (69%), Gaps = 20/182 (10%)
Query: 29 NKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFG 88
N D +EPE +RKLFIGGLDYRT DD+LKA FE+WG+IVDVVVMKDP TKRSRGFG
Sbjct: 11 NSNGHDDDITEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFG 70
Query: 89 FITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ 138
FITYS S M+DEA RPH+IDGRVVE KRAVPR+ VK V ++ ++
Sbjct: 71 FITYSHSTMIDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDE 130
Query: 139 M---DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVIN 195
DYF +G+I +N+V +KETG KRGFAF+EFDDYD VDK+VL K Q +N
Sbjct: 131 QSLRDYFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQK-------QHQLN 183
Query: 196 GE 197
G+
Sbjct: 184 GK 185
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 56/82 (68%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ SL+ +F+ +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 115 TVKKLFVGALKDDHDEQSLRDYFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKV 174
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+++G++V+ K+A+P++
Sbjct: 175 VLQKQHQLNGKMVDVKKALPKQ 196
>gi|195574505|ref|XP_002105229.1| GD21374 [Drosophila simulans]
gi|194201156|gb|EDX14732.1| GD21374 [Drosophila simulans]
Length = 2951
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 141/214 (65%), Gaps = 28/214 (13%)
Query: 4 VMQYIFKLVPG----LEVAGTVVP---LAMIINKAMEDSQCSEPESLRKLFIGGLDYRTN 56
+QY + + G + ++G +P L ++ +DS +EPE +RKLFIGGLDYRT
Sbjct: 2571 AVQYKYWTLSGEPLVMWLSGLHIPQSYLTALVQDFAQDS-ITEPEHMRKLFIGGLDYRTT 2629
Query: 57 DDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVET 116
D++LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS S M+DEA +RPH+IDGRVVE
Sbjct: 2630 DENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEP 2689
Query: 117 KRAVPRE----------VKVRRVTKVQIALEQM---DYFGQYGTIESVNMVTNKETGAKR 163
KRAVPR+ VK V ++ ++ DYF +G I +N+V +KETG KR
Sbjct: 2690 KRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQNFGNIVDINIVIDKETGKKR 2749
Query: 164 GFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGE 197
GFAF+EFDDYD VDK+VL K Q +NG+
Sbjct: 2750 GFAFVEFDDYDPVDKVVLQK-------QHQLNGK 2776
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 56/82 (68%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ S++ +F+ +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 2706 TVKKLFVGALKDDHDEQSIRDYFQNFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 2765
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+++G++V+ K+A+P++
Sbjct: 2766 VLQKQHQLNGKMVDVKKALPKQ 2787
>gi|332017443|gb|EGI58166.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Acromyrmex echinatior]
Length = 407
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 133/193 (68%), Gaps = 17/193 (8%)
Query: 4 VMQYIFKLVPGLEVAGTVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAF 63
V++Y K+ L ++ + M + ED + +EPE +RKLFIGGLDYRT DDSLK
Sbjct: 12 VIEYYSKV---LRQCRKMLAMPMFATVSQEDGK-NEPEHVRKLFIGGLDYRTTDDSLKKH 67
Query: 64 FEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
FEQWGEIVDVVVMKDP TKRSRGFGFITYS + MVD+A + RPH +DGRVVE KRAVPR+
Sbjct: 68 FEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHRVDGRVVEPKRAVPRQ 127
Query: 124 ----------VKVRRVTKVQIALEQMD---YFGQYGTIESVNMVTNKETGAKRGFAFIEF 170
VK V ++ E+ D YF YG+I S+++VT+KETG KRGF F+EF
Sbjct: 128 EIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEF 187
Query: 171 DDYDVVDKIVLDK 183
DDYD VDKI L +
Sbjct: 188 DDYDPVDKICLQR 200
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 30 KAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ + PE+ ++KLF+GGL ++ L+ +F+ +G I + ++ D T + RG
Sbjct: 122 RAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRG 181
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPR 122
FGF+ + + VD+ R H+I G+ V+ K+A+ R
Sbjct: 182 FGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKALSR 217
>gi|195503537|ref|XP_002098694.1| GE23791 [Drosophila yakuba]
gi|194184795|gb|EDW98406.1| GE23791 [Drosophila yakuba]
Length = 356
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 125/178 (70%), Gaps = 20/178 (11%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
ED +EPE +RKLFIGGLDYRT D++LKA FE+WG IVDVVVMKDP TKRSRGFGFITY
Sbjct: 15 EDDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITY 74
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM--- 139
S S M+DEA +RPH+IDGRVVE KRAVPR+ VK V ++ ++
Sbjct: 75 SHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQCIR 134
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGE 197
DYF +G I +N+V +KETG KRGFAF+EFDDYD VDK+VL K Q +NG+
Sbjct: 135 DYFQHFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQK-------QHQLNGK 185
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 55/82 (67%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ ++ +F+ +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 115 TVKKLFVGALKDDHDEQCIRDYFQHFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKV 174
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+++G++V+ K+A+P++
Sbjct: 175 VLQKQHQLNGKMVDVKKALPKQ 196
>gi|195445835|ref|XP_002070507.1| GK12096 [Drosophila willistoni]
gi|194166592|gb|EDW81493.1| GK12096 [Drosophila willistoni]
Length = 385
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 127/178 (71%), Gaps = 20/178 (11%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
+D +EPE +RKLFIGGLDYRT+D++LKA FE+WG+IVDVVVMKDP TKRSRGFGFITY
Sbjct: 19 DDDSITEPEHMRKLFIGGLDYRTSDENLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITY 78
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM--- 139
S S M+DEA RPH+IDGRVVE KRAVPR+ VK V ++ ++
Sbjct: 79 SHSSMIDEAQKARPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLR 138
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGE 197
DYF +G+I +N+V +KETG KRGFAF+EFDDYD VDK+VL K Q +NG+
Sbjct: 139 DYFSNFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQK-------QHQLNGK 189
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 55/82 (67%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ SL+ +F +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 119 TVKKLFVGALKDDHDEQSLRDYFSNFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKV 178
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+++G++V+ K+A+P++
Sbjct: 179 VLQKQHQLNGKMVDVKKALPKQ 200
>gi|194745154|ref|XP_001955057.1| GF18582 [Drosophila ananassae]
gi|190628094|gb|EDV43618.1| GF18582 [Drosophila ananassae]
Length = 357
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/168 (60%), Positives = 122/168 (72%), Gaps = 13/168 (7%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
D + +EPE +RKLFIGGLDYRT D++LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS
Sbjct: 16 DDEITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYS 75
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM---D 140
S M+DEA +RPH+IDGRVVE KRAVPR+ VK V ++ ++ D
Sbjct: 76 HSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSLRD 135
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
YF +G I +N+V +KETG KRGFAF+EFDDYD VDK+VL K L+
Sbjct: 136 YFQNFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLK 183
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 56/85 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ SL+ +F+ +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 115 TVKKLFVGALKDDHDEQSLRDYFQNFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKV 174
Query: 102 MSNRPHEIDGRVVETKRAVPREVKV 126
+ + H++ G++V+ K+A+P++ V
Sbjct: 175 VLQKQHQLKGKMVDVKKALPKQSDV 199
>gi|24650838|ref|NP_733252.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
[Drosophila melanogaster]
gi|24650840|ref|NP_733253.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
[Drosophila melanogaster]
gi|157651|gb|AAA28621.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|16769554|gb|AAL28996.1| LD38464p [Drosophila melanogaster]
gi|23172512|gb|AAN14143.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
[Drosophila melanogaster]
gi|23172513|gb|AAN14144.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
[Drosophila melanogaster]
Length = 361
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 125/178 (70%), Gaps = 20/178 (11%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
+D +EPE +RKLFIGGLDYRT D++LKA FE+WG IVDVVVMKDP TKRSRGFGFITY
Sbjct: 16 DDDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITY 75
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM--- 139
S S M+DEA +RPH+IDGRVVE KRAVPR+ VK V ++ ++
Sbjct: 76 SHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIR 135
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGE 197
DYF +G I +N+V +KETG KRGFAF+EFDDYD VDK+VL K Q +NG+
Sbjct: 136 DYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQK-------QHQLNGK 186
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 56/82 (68%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ S++ +F+ +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 116 TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 175
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+++G++V+ K+A+P++
Sbjct: 176 VLQKQHQLNGKMVDVKKALPKQ 197
>gi|153792009|ref|NP_001093319.1| heterogeneous nuclear ribonucleoprotein A1 [Bombyx mori]
gi|95102934|gb|ABF51408.1| heterogeneous nuclear ribonucleoprotein A1 [Bombyx mori]
Length = 316
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 100/156 (64%), Positives = 118/156 (75%), Gaps = 13/156 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE RKLFIGGLDYRT D SLK F+EQWGEIVDVVVMKDP TKRS+GFGFITYS++ MV
Sbjct: 12 EPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMV 71
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQMD---YFGQY 145
DEA +NRPH+IDGR+VE KRAVPRE VK V ++ +E+ D YF +
Sbjct: 72 DEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTF 131
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
G I SV++VT+KETG KRGF F+EFDDYD VD++ L
Sbjct: 132 GNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCL 167
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 30 KAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ + PE+ ++KLF+ GL ++ L+ +F +G IV V V+ D T + RG
Sbjct: 91 RAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRG 150
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPR 122
FGF+ + + VD + H+I + ++ K+A+ +
Sbjct: 151 FGFVEFDDYDPVDRVCLQQNHQIKDQHLDVKKAISK 186
>gi|24650833|ref|NP_733250.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
[Drosophila melanogaster]
gi|157653|gb|AAA28623.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172510|gb|AAN14141.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
[Drosophila melanogaster]
gi|259089588|gb|ACV91650.1| RE34829p [Drosophila melanogaster]
Length = 360
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 120/164 (73%), Gaps = 13/164 (7%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
+D +EPE +RKLFIGGLDYRT D++LKA FE+WG IVDVVVMKDP TKRSRGFGFITY
Sbjct: 15 QDDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITY 74
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM--- 139
S S M+DEA +RPH+IDGRVVE KRAVPR+ VK V ++ ++
Sbjct: 75 SHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIR 134
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +G I +N+V +KETG KRGFAF+EFDDYD VDK+VL K
Sbjct: 135 DYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQK 178
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 56/82 (68%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ S++ +F+ +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 115 TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 174
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+++G++V+ K+A+P++
Sbjct: 175 VLQKQHQLNGKMVDVKKALPKQ 196
>gi|194906902|ref|XP_001981451.1| GG11603 [Drosophila erecta]
gi|190656089|gb|EDV53321.1| GG11603 [Drosophila erecta]
Length = 358
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 125/178 (70%), Gaps = 20/178 (11%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
+D +EPE +RKLFIGGLDYRT D++LKA FE+WG IVDVVVMKDP TKRSRGFGFITY
Sbjct: 16 DDDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITY 75
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM--- 139
S S M+DEA +RPH+IDGRVVE KRAVPR+ VK V ++ ++
Sbjct: 76 SHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQCIR 135
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGE 197
DYF +G I +N+V +KETG KRGFAF+EFDDYD VDK+VL K Q +NG+
Sbjct: 136 DYFQHFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQK-------QHQLNGK 186
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 55/82 (67%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ ++ +F+ +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 116 TVKKLFVGALKDDHDEQCIRDYFQHFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKV 175
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+++G++V+ K+A+P++
Sbjct: 176 VLQKQHQLNGKMVDVKKALPKQ 197
>gi|110767982|ref|XP_624411.2| PREDICTED: hypothetical protein LOC552027 [Apis mellifera]
gi|380027797|ref|XP_003697603.1| PREDICTED: uncharacterized protein LOC100868777 [Apis florea]
Length = 378
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/167 (61%), Positives = 121/167 (72%), Gaps = 13/167 (7%)
Query: 30 KAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
K D +EPE +RKLFIGGLDYRT DDSLK FE+WGEIVDVVVMKDP TKRSRGFGF
Sbjct: 3 KMEHDDGKNEPEHVRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGF 62
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM 139
ITYS + MVD+A + RPH++DGRVVE KRAVPR+ VK V ++ E+
Sbjct: 63 ITYSRAHMVDDAQNARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEED 122
Query: 140 D---YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
D YF YGTI S+++VT+KETG KRGF F+EFDDYD VDKI L +
Sbjct: 123 DLKQYFQSYGTINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQR 169
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 30 KAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ + PE+ ++KLF+GGL +D LK +F+ +G I + ++ D T + RG
Sbjct: 91 RAVPRQEIGRPEAGATVKKLFVGGLKDDHEEDDLKQYFQSYGTINSISIVTDKETGKKRG 150
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAV 120
FGF+ + + VD+ R H+I G+ V+ K+A+
Sbjct: 151 FGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKAL 184
>gi|328709829|ref|XP_001950969.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 349
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/157 (62%), Positives = 119/157 (75%), Gaps = 12/157 (7%)
Query: 37 CSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESK 96
EPE RKLFIGGL+Y T +DSLK FFEQWGEIVDVVVMKDP TKRSRGFGFITYS+S
Sbjct: 3 SDEPEQYRKLFIGGLNYTTTNDSLKEFFEQWGEIVDVVVMKDPQTKRSRGFGFITYSQSS 62
Query: 97 MVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ--MDYFGQ 144
MVD+AMSNRPH+IDGR VETKRAVPR+ VK V+ ++ E ++YFG+
Sbjct: 63 MVDQAMSNRPHKIDGREVETKRAVPRDDIDKPDIAATVKKMFVSGIKEQSENDLLEYFGK 122
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
+G I +V +VT+K++G ++GF FIE+DD D VDK VL
Sbjct: 123 FGNITNVTIVTDKDSGQRKGFGFIEYDDTDSVDKAVL 159
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+ G+ ++ +D L+ +F ++G I +V ++ D + + +GFGFI Y ++ VD+A
Sbjct: 99 TVKKMFVSGIKEQSENDLLE-YFGKFGNITNVTIVTDKDSGQRKGFGFIEYDDTDSVDKA 157
Query: 102 MSNRPHEIDGRVVETKRAV 120
+ + H++ G ++ K+A+
Sbjct: 158 VLIKSHQVAGGKLDVKKAI 176
>gi|322799899|gb|EFZ21040.1| hypothetical protein SINV_06138 [Solenopsis invicta]
Length = 373
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/159 (63%), Positives = 118/159 (74%), Gaps = 13/159 (8%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
+EPE +RKLFIGGLDYRT DDSLK FEQWGEIVDVVVMKDP TKRSRGFGFITYS + M
Sbjct: 4 NEPEHVRKLFIGGLDYRTTDDSLKKHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHM 63
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQMD---YFGQ 144
VD+A + RPH +DGRVVE KRAVPR+ VK V ++ E+ D YF
Sbjct: 64 VDDAQNARPHRVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQS 123
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YG+I S+++VT+KETG KRGF F+EFDDYD VDKI L +
Sbjct: 124 YGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQR 162
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 30 KAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ + PE+ ++KLF+GGL ++ L+ +F+ +G I + ++ D T + RG
Sbjct: 84 RAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRG 143
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPR 122
FGF+ + + VD+ R H+I G+ V+ K+A+ R
Sbjct: 144 FGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKALSR 179
>gi|195113429|ref|XP_002001270.1| GI10692 [Drosophila mojavensis]
gi|193917864|gb|EDW16731.1| GI10692 [Drosophila mojavensis]
Length = 379
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/168 (60%), Positives = 122/168 (72%), Gaps = 13/168 (7%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
D Q SEPE LRKLFIGGLDYRT D+ LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS
Sbjct: 15 DEQISEPEQLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYS 74
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MD 140
+S M+D A + RPH+IDGR VE KRAVPR+ VK V ++ ++ +
Sbjct: 75 QSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLRE 134
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
YF ++G I VN+V++K+TG KRGFAFIEFDDYD VDKI+L K ++
Sbjct: 135 YFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHTIK 182
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GGL +++ L+ +F+++G+IV V ++ D T + RGF FI + + VD+
Sbjct: 114 TVKKLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKI 173
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I + ++ K+A+ ++
Sbjct: 174 ILQKTHTIKNKTLDVKKAIAKQ 195
>gi|195390403|ref|XP_002053858.1| GJ23111 [Drosophila virilis]
gi|194151944|gb|EDW67378.1| GJ23111 [Drosophila virilis]
Length = 382
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 120/164 (73%), Gaps = 13/164 (7%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
D Q SEPE LRKLFIGGLDYRT D+ LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS
Sbjct: 15 DEQISEPEQLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYS 74
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MD 140
+S M+D A + RPH+IDGR VE KRAVPR+ VK V ++ ++ +
Sbjct: 75 QSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLRE 134
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKV 184
YF ++G I VN+V++K+TG KRGFAFIEFDDYD VDKI+L K
Sbjct: 135 YFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKT 178
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GGL +++ L+ +F+++G+IV V ++ D T + RGF FI + + VD+
Sbjct: 114 TVKKLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKI 173
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I + ++ K+A+ ++
Sbjct: 174 ILQKTHNIKNKTLDVKKAIAKQ 195
>gi|195036930|ref|XP_001989921.1| GH19058 [Drosophila grimshawi]
gi|193894117|gb|EDV92983.1| GH19058 [Drosophila grimshawi]
Length = 379
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 120/164 (73%), Gaps = 13/164 (7%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
D Q SEPE LRKLFIGGLDYRT D+ LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS
Sbjct: 15 DEQISEPEQLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYS 74
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MD 140
+S M+D A + RPH+IDGR VE KRAVPR+ VK V ++ ++ +
Sbjct: 75 QSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLRE 134
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKV 184
YF ++G I VN+V++K+TG KRGFAFIEFDDYD VDKI+L K
Sbjct: 135 YFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKT 178
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GGL +++ L+ +F+++G+IV V ++ D T + RGF FI + + VD+
Sbjct: 114 TVKKLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKI 173
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I + ++ K+A+ ++
Sbjct: 174 ILQKTHNIKNKTLDVKKAIAKQ 195
>gi|198452965|ref|XP_002137573.1| GA26465 [Drosophila pseudoobscura pseudoobscura]
gi|198132155|gb|EDY68131.1| GA26465 [Drosophila pseudoobscura pseudoobscura]
Length = 401
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/168 (60%), Positives = 121/168 (72%), Gaps = 13/168 (7%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
D Q +EPE LRKLFIGGLDYRT DD LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS
Sbjct: 15 DEQITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYS 74
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MD 140
+S M+D A + RPH+IDGR VE KRAVPR+ VK V ++ ++ +
Sbjct: 75 QSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLRE 134
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
YF +G I VN+V++K+TG KRGFAFIEFDDYD VDKI+L K ++
Sbjct: 135 YFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHTIK 182
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GGL +++ L+ +F+ +G+IV V ++ D T + RGF FI + + VD+
Sbjct: 114 TVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKI 173
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I + ++ K+A+ ++
Sbjct: 174 ILQKTHTIKNKSLDVKKAIAKQ 195
>gi|350401887|ref|XP_003486296.1| PREDICTED: hypothetical protein LOC100748395 [Bombus impatiens]
Length = 378
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 121/167 (72%), Gaps = 13/167 (7%)
Query: 30 KAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
K D +EPE +RKLFIGGLDYRT DDSLK FE+WGEIVDVVVMKDP TKRSRGFGF
Sbjct: 3 KMEHDDGKNEPEHVRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGF 62
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM 139
ITYS + MVD+A + RPH++DGRVVE KRAVPR+ VK V ++ E+
Sbjct: 63 ITYSRAHMVDDAQNARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEE 122
Query: 140 D---YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
D YF YG+I S+++VT+KETG KRGF F+EFDDYD VDKI L +
Sbjct: 123 DLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQR 169
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 30 KAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ + PE+ ++KLF+GGL ++ L+ +F+ +G I + ++ D T + RG
Sbjct: 91 RAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRG 150
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAV 120
FGF+ + + VD+ R H+I G+ V+ K+A+
Sbjct: 151 FGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKAL 184
>gi|195451840|ref|XP_002073098.1| GK13334 [Drosophila willistoni]
gi|194169183|gb|EDW84084.1| GK13334 [Drosophila willistoni]
Length = 402
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/163 (62%), Positives = 119/163 (73%), Gaps = 13/163 (7%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
D Q SEPE LRKLFIGGLDYRT D+ LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS
Sbjct: 15 DEQISEPEQLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYS 74
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MD 140
+S M+D A + RPH+IDGR VE KRAVPR+ VK V ++ ++ +
Sbjct: 75 QSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLRE 134
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YF +G I VN+V++KETG KRGFAFIEFDDYD VDKI+L K
Sbjct: 135 YFKDFGQIVGVNIVSDKETGKKRGFAFIEFDDYDPVDKIILQK 177
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GGL +++ L+ +F+ +G+IV V ++ D T + RGF FI + + VD+
Sbjct: 114 TVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKETGKKRGFAFIEFDDYDPVDKI 173
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I + ++ K+A+ ++
Sbjct: 174 ILQKSHTIKNKTLDVKKAIAKQ 195
>gi|17738267|ref|NP_524543.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|24650836|ref|NP_733251.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
gi|133253|sp|P07909.1|ROA1_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=PEN repeat clone P9;
AltName: Full=hnRNP core protein A1-A
gi|157654|gb|AAA28624.1| nulcear ribonucleoprotein [Drosophila melanogaster]
gi|908757|gb|AAA70426.1| unknown protein [Drosophila melanogaster]
gi|7301687|gb|AAF56801.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|23172511|gb|AAN14142.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
Length = 365
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 123/174 (70%), Gaps = 20/174 (11%)
Query: 37 CSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESK 96
+EPE +RKLFIGGLDYRT D++LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS S
Sbjct: 24 ITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSS 83
Query: 97 MVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM---DYFG 143
M+DEA +RPH+IDGRVVE KRAVPR+ VK V ++ ++ DYF
Sbjct: 84 MIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQ 143
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGE 197
+G I +N+V +KETG KRGFAF+EFDDYD VDK+VL K Q +NG+
Sbjct: 144 HFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQK-------QHQLNGK 190
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 56/82 (68%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ S++ +F+ +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 120 TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 179
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+++G++V+ K+A+P++
Sbjct: 180 VLQKQHQLNGKMVDVKKALPKQ 201
>gi|383855454|ref|XP_003703227.1| PREDICTED: uncharacterized protein LOC100883215 [Megachile
rotundata]
Length = 378
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 121/167 (72%), Gaps = 13/167 (7%)
Query: 30 KAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
K D +EPE +RKLFIGGLDYRT DDSLK FE+WGEIVDVVVMKDP TKRSRGFGF
Sbjct: 3 KMEHDDGKNEPEHVRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGF 62
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM 139
ITYS + MVD+A + RPH++DGRVVE KRAVPR+ VK V ++ E+
Sbjct: 63 ITYSRAHMVDDAQNARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEE 122
Query: 140 D---YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
D YF YG+I S+++VT+KETG KRGF F+EFDDYD VDKI L +
Sbjct: 123 DLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQR 169
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 30 KAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ + PE+ ++KLF+GGL ++ L+ +F+ +G I + ++ D T + RG
Sbjct: 91 RAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRG 150
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPR 122
FGF+ + + VD+ R H+I G+ V+ K+A+ R
Sbjct: 151 FGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKALSR 186
>gi|195353064|ref|XP_002043030.1| GM16385 [Drosophila sechellia]
gi|194127095|gb|EDW49138.1| GM16385 [Drosophila sechellia]
Length = 363
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 123/174 (70%), Gaps = 20/174 (11%)
Query: 37 CSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESK 96
+EPE +RKLFIGGLDYRT D++LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS S
Sbjct: 22 ITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSS 81
Query: 97 MVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM---DYFG 143
M+DEA +RPH+IDGRVVE KRAVPR+ VK V ++ ++ DYF
Sbjct: 82 MIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQ 141
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGE 197
+G I +N+V +KETG KRGFAF+EFDDYD VDK+VL K Q +NG+
Sbjct: 142 NFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQK-------QHQLNGK 188
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 56/82 (68%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ S++ +F+ +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 118 TVKKLFVGALKDDHDEQSIRDYFQNFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 177
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+++G++V+ K+A+P++
Sbjct: 178 VLQKQHQLNGKMVDVKKALPKQ 199
>gi|317453642|gb|ADV19029.1| AT02853p [Drosophila melanogaster]
Length = 372
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 123/173 (71%), Gaps = 20/173 (11%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
+EPE +RKLFIGGLDYRT D++LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS S M
Sbjct: 32 TEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSM 91
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM---DYFGQ 144
+DEA +RPH+IDGRVVE KRAVPR+ VK V ++ ++ DYF
Sbjct: 92 IDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQH 151
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGE 197
+G I +N+V +KETG KRGFAF+EFDDYD VDK+VL K Q +NG+
Sbjct: 152 FGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQK-------QHQLNGK 197
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 56/82 (68%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ S++ +F+ +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 127 TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 186
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+++G++V+ K+A+P++
Sbjct: 187 VLQKQHQLNGKMVDVKKALPKQ 208
>gi|24650831|ref|NP_733249.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
gi|157652|gb|AAA28622.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172509|gb|AAF56800.2| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
Length = 364
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/160 (61%), Positives = 118/160 (73%), Gaps = 13/160 (8%)
Query: 37 CSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESK 96
+EPE +RKLFIGGLDYRT D++LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS S
Sbjct: 23 ITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSS 82
Query: 97 MVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM---DYFG 143
M+DEA +RPH+IDGRVVE KRAVPR+ VK V ++ ++ DYF
Sbjct: 83 MIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQ 142
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+G I +N+V +KETG KRGFAF+EFDDYD VDK+VL K
Sbjct: 143 HFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQK 182
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 56/82 (68%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ S++ +F+ +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 119 TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 178
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+++G++V+ K+A+P++
Sbjct: 179 VLQKQHQLNGKMVDVKKALPKQ 200
>gi|340718466|ref|XP_003397688.1| PREDICTED: hypothetical protein LOC100643287 [Bombus terrestris]
Length = 379
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 100/159 (62%), Positives = 119/159 (74%), Gaps = 13/159 (8%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
+EPE +RKLFIGGLDYRT DDSLK FE+WGEIVDVVVMKDP TKRSRGFGFITYS + M
Sbjct: 11 NEPEHVRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHM 70
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQMD---YFGQ 144
VD+A + RPH++DGRVVE KRAVPR+ VK V ++ E+ D YF
Sbjct: 71 VDDAQNARPHKVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQS 130
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YG+I S+++VT+KETG KRGF F+EFDDYD VDKI L +
Sbjct: 131 YGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQR 169
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 30 KAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ + PE+ ++KLF+GGL ++ L+ +F+ +G I + ++ D T + RG
Sbjct: 91 RAVPRQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRG 150
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAV 120
FGF+ + + VD+ R H+I G+ V+ K+A+
Sbjct: 151 FGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKAL 184
>gi|193575575|ref|XP_001951661.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 303
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 97/155 (62%), Positives = 119/155 (76%), Gaps = 12/155 (7%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE RKLFIGGL+Y T +DSLK FFE+WG+IVDVVVMKDPVTKRSRGFGFITYS++ MV
Sbjct: 13 EPEQFRKLFIGGLNYTTTNDSLKEFFEKWGDIVDVVVMKDPVTKRSRGFGFITYSKASMV 72
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ--MDYFGQYG 146
D+AM+NRPH+IDGR VETKRAVPR+ VK V+ ++ E+ +YFGQYG
Sbjct: 73 DDAMANRPHKIDGREVETKRAVPRDDIDKPDIAWTVKKMFVSGIKEQAEEDLKEYFGQYG 132
Query: 147 TIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
I ++ ++ +KETG ++GF FIEFDD D VDK VL
Sbjct: 133 NILNIQIIADKETGQRKGFGFIEFDDSDSVDKAVL 167
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+ G+ + +D LK +F Q+G I+++ ++ D T + +GFGFI + +S VD+A
Sbjct: 107 TVKKMFVSGIKEQAEED-LKEYFGQYGNILNIQIIADKETGQRKGFGFIEFDDSDSVDKA 165
Query: 102 MSNRPHEIDGRVVETKRAVPREV 124
+ + HE+ G +E K+AV ++V
Sbjct: 166 VLIKTHEVSGSKLEVKKAVSKDV 188
>gi|317183317|gb|ADV15462.1| LD46071p [Drosophila melanogaster]
Length = 396
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 123/173 (71%), Gaps = 20/173 (11%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
+EPE +RKLFIGGLDYRT D++LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS S M
Sbjct: 56 TEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSM 115
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM---DYFGQ 144
+DEA +RPH+IDGRVVE KRAVPR+ VK V ++ ++ DYF
Sbjct: 116 IDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQH 175
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGE 197
+G I +N+V +KETG KRGFAF+EFDDYD VDK+VL K Q +NG+
Sbjct: 176 FGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQK-------QHQLNGK 221
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 56/82 (68%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+G L ++ S++ +F+ +G IVD+ ++ D T + RGF F+ + + VD+
Sbjct: 151 TVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 210
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+++G++V+ K+A+P++
Sbjct: 211 VLQKQHQLNGKMVDVKKALPKQ 232
>gi|156549026|ref|XP_001607355.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Nasonia vitripennis]
Length = 371
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/167 (61%), Positives = 119/167 (71%), Gaps = 13/167 (7%)
Query: 30 KAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
K D +EPE +RKLFIGGLDYRT DDSLK FEQWG+IVDVVVMKDP TKRSRGFGF
Sbjct: 3 KMEHDDGKNEPEHVRKLFIGGLDYRTTDDSLKKHFEQWGDIVDVVVMKDPKTKRSRGFGF 62
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM 139
ITYS + MVD+A + RPH +DGRVVE KRAVPR+ VK V ++ E+
Sbjct: 63 ITYSRAHMVDDAQNARPHRVDGRVVEPKRAVPRQEIGRPEAGATVKKLFVGGLKDDHEED 122
Query: 140 D---YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
D YF YG I SV++VT+K+TG KRGF F+EFDDYD VDKI L +
Sbjct: 123 DLRVYFQGYGNINSVSIVTDKDTGKKRGFGFVEFDDYDPVDKICLQR 169
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 30 KAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ + PE+ ++KLF+GGL +D L+ +F+ +G I V ++ D T + RG
Sbjct: 91 RAVPRQEIGRPEAGATVKKLFVGGLKDDHEEDDLRVYFQGYGNINSVSIVTDKDTGKKRG 150
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPR 122
FGF+ + + VD+ R H+I G+ V+ K+A+ R
Sbjct: 151 FGFVEFDDYDPVDKICLQRNHQIRGKHVDVKKALSR 186
>gi|829184|emb|CAA41170.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 386
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/162 (61%), Positives = 119/162 (73%), Gaps = 13/162 (8%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
+ +EPE LRKLFIGGLDYRT DD LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS+S
Sbjct: 16 EITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQS 75
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYF 142
M+D A + RPH+IDGR VE KRAVPR+ VK V ++ ++ +YF
Sbjct: 76 YMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYF 135
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKV 184
+G I SVN+V++K+TG KRGFAFIEFDDYD VDKI+L K
Sbjct: 136 KDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKT 177
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 20 TVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDP 79
TV P + + ++ +++KLF+GGL +++ L+ +F+ +G+IV V ++ D
Sbjct: 93 TVEPKRAVPRQEIDSPNAGA--TVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDK 150
Query: 80 VTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
T + RGF FI + + VD+ + + H I + ++ K+A+ ++
Sbjct: 151 DTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQ 194
>gi|11036|emb|CAA44502.1| hrp36.1 [Drosophila melanogaster]
Length = 326
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/162 (61%), Positives = 119/162 (73%), Gaps = 13/162 (8%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
+ +EPE LRKLFIGGLDYRT DD LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS+S
Sbjct: 16 EITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQS 75
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYF 142
M+D A + RPH+IDGR VE KRAVPR+ VK V ++ ++ +YF
Sbjct: 76 YMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYF 135
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKV 184
+G I SVN+V++K+TG KRGFAFIEFDDYD VDKI+L K
Sbjct: 136 KDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKT 177
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 20 TVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDP 79
TV P + + ++ +++KLF+GGL +++ L+ +F+ +G+IV V ++ D
Sbjct: 93 TVEPKRAVPRQEIDSPNAGA--TVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDK 150
Query: 80 VTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
T + RGF FI + + VD+ + + H I + ++ K+A+ ++
Sbjct: 151 DTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQ 194
>gi|8318|emb|CAA42212.1| P11 (hnRNP protein) [Drosophila melanogaster]
Length = 386
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/162 (61%), Positives = 119/162 (73%), Gaps = 13/162 (8%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
+ +EPE LRKLFIGGLDYRT DD LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS+S
Sbjct: 16 EITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQS 75
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYF 142
M+D A + RPH+IDGR VE KRAVPR+ VK V ++ ++ +YF
Sbjct: 76 YMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYF 135
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKV 184
+G I SVN+V++K+TG KRGFAFIEFDDYD VDKI+L K
Sbjct: 136 KDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKT 177
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 20 TVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDP 79
TV P + + ++ +++KLF+GGL +++ L+ +F+ +G+IV V ++ D
Sbjct: 93 TVEPKRAVPRQEIDSPNAGA--TVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDK 150
Query: 80 VTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
T + RGF FI + + VD+ + + H I + ++ K+A+ ++
Sbjct: 151 DTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQ 194
>gi|17136624|ref|NP_476807.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform A
[Drosophila melanogaster]
gi|281361714|ref|NP_001163602.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform C
[Drosophila melanogaster]
gi|442618907|ref|NP_001262538.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform D
[Drosophila melanogaster]
gi|442618909|ref|NP_476806.2| heterogeneous nuclear ribonucleoprotein at 87F, isoform E
[Drosophila melanogaster]
gi|78099792|sp|P48810.2|RB87F_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein 87F; AltName:
Full=HRP36.1 protein; AltName: Full=Protein P11
gi|7299788|gb|AAF54967.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform A
[Drosophila melanogaster]
gi|45825065|gb|AAS77440.1| LD32727p [Drosophila melanogaster]
gi|220951504|gb|ACL88295.1| Hrb87F-PA [synthetic construct]
gi|220959722|gb|ACL92404.1| Hrb87F-PA [synthetic construct]
gi|272476964|gb|ACZ94899.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform C
[Drosophila melanogaster]
gi|325530374|gb|ADZ25120.1| MIP15350p [Drosophila melanogaster]
gi|440217389|gb|AGB95920.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform D
[Drosophila melanogaster]
gi|440217390|gb|AAN13574.2| heterogeneous nuclear ribonucleoprotein at 87F, isoform E
[Drosophila melanogaster]
Length = 385
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/162 (61%), Positives = 119/162 (73%), Gaps = 13/162 (8%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
+ +EPE LRKLFIGGLDYRT DD LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS+S
Sbjct: 16 EITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQS 75
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYF 142
M+D A + RPH+IDGR VE KRAVPR+ VK V ++ ++ +YF
Sbjct: 76 YMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYF 135
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKV 184
+G I SVN+V++K+TG KRGFAFIEFDDYD VDKI+L K
Sbjct: 136 KDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKT 177
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 20 TVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDP 79
TV P + + ++ +++KLF+GGL +++ L+ +F+ +G+IV V ++ D
Sbjct: 93 TVEPKRAVPRQEIDSPNAGA--TVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDK 150
Query: 80 VTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
T + RGF FI + + VD+ + + H I + ++ K+A+ ++
Sbjct: 151 DTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQ 194
>gi|8094|emb|CAA38574.1| Hrb87F [Drosophila melanogaster]
Length = 386
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/162 (61%), Positives = 119/162 (73%), Gaps = 13/162 (8%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
+ +EPE LRKLFIGGLDYRT DD LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS+S
Sbjct: 16 EITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQS 75
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYF 142
M+D A + RPH+IDGR VE KRAVPR+ VK V ++ ++ +YF
Sbjct: 76 YMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYF 135
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKV 184
+G I SVN+V++K+TG KRGFAFIEFDDYD VDKI+L K
Sbjct: 136 KDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKT 177
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 20 TVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDP 79
TV P + + ++ +++KLF+GGL +++ L+ +F+ +G+IV V ++ D
Sbjct: 93 TVEPKRAVPRQEIDSPNAGA--TVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDK 150
Query: 80 VTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
T + RGF FI + + VD+ + + H I + ++ K+A+ ++
Sbjct: 151 DTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQ 194
>gi|133256|sp|P21522.1|ROA1_SCHAM RecName: Full=Heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog
gi|10107|emb|CAA38481.1| mammalian A1, A2 /B1 hnRNP homologue [Schistocerca americana]
Length = 342
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 100/163 (61%), Positives = 118/163 (72%), Gaps = 13/163 (7%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
++ EPE +RKLFIGGLDYRT D+SLK FEQWGEIVDVVVMKDP TKRSRGFGFITYS
Sbjct: 7 ENDHGEPEHVRKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYS 66
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPR----------EVKVRRVTKVQIALEQ---MD 140
+ MVD+A + RPH++DGRVVE KRAVPR VK V ++ +E+ D
Sbjct: 67 RAHMVDDAQNARPHKVDGRVVEPKRAVPRTEIGRPEAGATVKKLFVGGIKEEMEENDLRD 126
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YF QYGT+ S +V +KET KRGFAF+EFDDYD VDKI L +
Sbjct: 127 YFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKICLSR 169
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 30 KAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ ++ PE+ ++KLF+GG+ ++ L+ +F+Q+G +V ++ D T++ RG
Sbjct: 91 RAVPRTEIGRPEAGATVKKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRG 150
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPR 122
F F+ + + VD+ +R H+I G+ ++ K+A+P+
Sbjct: 151 FAFVEFDDYDPVDKICLSRNHQIRGKHIDVKKALPK 186
>gi|195329210|ref|XP_002031304.1| GM25918 [Drosophila sechellia]
gi|194120247|gb|EDW42290.1| GM25918 [Drosophila sechellia]
Length = 385
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 99/162 (61%), Positives = 119/162 (73%), Gaps = 13/162 (8%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
+ +EPE LRKLFIGGLDYRT D+ LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS+S
Sbjct: 16 EITEPEQLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQS 75
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYF 142
M+D A + RPH+IDGR VE KRAVPR+ VK V ++ ++ +YF
Sbjct: 76 YMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEECLREYF 135
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKV 184
+G I SVN+V++K+TG KRGFAFIEFDDYD VDKI+L K
Sbjct: 136 KDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKT 177
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 20 TVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDP 79
TV P + + ++ +++KLF+GGL +++ L+ +F+ +G+IV V ++ D
Sbjct: 93 TVEPKRAVPRQEIDSPNAGA--TVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDK 150
Query: 80 VTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
T + RGF FI + + VD+ + + H I + ++ K+A+ ++
Sbjct: 151 DTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQ 194
>gi|194901402|ref|XP_001980241.1| GG17033 [Drosophila erecta]
gi|190651944|gb|EDV49199.1| GG17033 [Drosophila erecta]
Length = 392
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 99/161 (61%), Positives = 118/161 (73%), Gaps = 13/161 (8%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
+ +EPE LRKLFIGGLDYRT DD LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS+S
Sbjct: 16 EITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQS 75
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYF 142
M+D A + RPH+IDGR VE KRAVPR+ VK V ++ ++ +YF
Sbjct: 76 YMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYF 135
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+G I VN+V++K+TG KRGFAFIEFDDYD VDKI+L K
Sbjct: 136 KDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQK 176
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GGL +++ L+ +F+ +G+IV V ++ D T + RGF FI + + VD+
Sbjct: 113 TVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKI 172
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I + ++ K+A+ ++
Sbjct: 173 ILQKNHTIKNKSLDVKKAIAKQ 194
>gi|357619642|gb|EHJ72132.1| heterogeneous nuclear ribonucleoprotein A1 [Danaus plexippus]
Length = 307
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/156 (62%), Positives = 115/156 (73%), Gaps = 13/156 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE RKLFIGGLDY T D SLK F+EQWG+IVDVVVMKDP TKRSRGFGFITYS + MV
Sbjct: 19 EPEHTRKLFIGGLDYCTTDTSLKEFYEQWGDIVDVVVMKDPQTKRSRGFGFITYSRAHMV 78
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQMD---YFGQY 145
D+A NRPH+IDGR+VE KRAVPRE VK + ++ +E+ D YF ++
Sbjct: 79 DDAQKNRPHKIDGRIVEPKRAVPREEIKRPDASATVKKLFIGGIKQDIEEEDLREYFSKF 138
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
G I SV++VT K+TG KRGF FIEFDDYD VD+I L
Sbjct: 139 GEIISVSLVTEKDTGKKRGFGFIEFDDYDPVDRICL 174
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 51/83 (61%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLFIGG+ ++ L+ +F ++GEI+ V ++ + T + RGFGFI + + VD
Sbjct: 113 TVKKLFIGGIKQDIEEEDLREYFSKFGEIISVSLVTEKDTGKKRGFGFIEFDDYDPVDRI 172
Query: 102 MSNRPHEIDGRVVETKRAVPREV 124
H++ GR ++ K+A+ + V
Sbjct: 173 CLQPSHKVKGRRLDVKKAISKTV 195
>gi|194741290|ref|XP_001953122.1| GF17368 [Drosophila ananassae]
gi|190626181|gb|EDV41705.1| GF17368 [Drosophila ananassae]
Length = 385
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 98/161 (60%), Positives = 118/161 (73%), Gaps = 13/161 (8%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
+ +EPE LRKLFIGGLDYRT D+ LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS+S
Sbjct: 16 EITEPEQLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQS 75
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYF 142
M+D A + RPH+IDGR VE KRAVPR+ VK V ++ ++ +YF
Sbjct: 76 YMIDNAQNARPHKIDGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYF 135
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+G I VN+V++K+TG KRGFAFIEFDDYD VDKI+L K
Sbjct: 136 KDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQK 176
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GGL +++ L+ +F+ +G+IV V ++ D T + RGF FI + + VD+
Sbjct: 113 TVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKI 172
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I + ++ K+A+ ++
Sbjct: 173 ILQKNHTIKNKSLDVKKAIAKQ 194
>gi|427777643|gb|JAA54273.1| Putative heteroproteinous nuclear ribonucleoprotein at 87f
[Rhipicephalus pulchellus]
Length = 309
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/164 (56%), Positives = 116/164 (70%), Gaps = 13/164 (7%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
SEPE RKLFIGGLDY+T ++SLK FEQWGE+VD VVM+DP TK+SRGFGFIT+ + M
Sbjct: 8 SEPEQFRKLFIGGLDYKTTEESLKGHFEQWGEVVDCVVMRDPSTKKSRGFGFITFRRAHM 67
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIAL-------------EQMDYFGQ 144
VD+A + RPH++DGR VE KRAVPRE R + + + DYF Q
Sbjct: 68 VDDAQAARPHKVDGREVEPKRAVPREEAGRPEAQATVKKVFVGGLKDDVDESDLRDYFSQ 127
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+G I SVN+VT K+TG KRGFAF+E+DDYD VDKIVL + +L+
Sbjct: 128 FGNILSVNLVTEKDTGRKRGFAFVEYDDYDPVDKIVLKRHHMLK 171
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 30 KAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ + PE+ ++K+F+GGL ++ L+ +F Q+G I+ V ++ + T R RG
Sbjct: 88 RAVPREEAGRPEAQATVKKVFVGGLKDDVDESDLRDYFSQFGNILSVNLVTEKDTGRKRG 147
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
F F+ Y + VD+ + R H + G+ E K+A+ ++
Sbjct: 148 FAFVEYDDYDPVDKIVLKRHHMLKGKRTEVKKALSKQ 184
>gi|195500856|ref|XP_002097553.1| GE24426 [Drosophila yakuba]
gi|194183654|gb|EDW97265.1| GE24426 [Drosophila yakuba]
Length = 391
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 98/161 (60%), Positives = 117/161 (72%), Gaps = 13/161 (8%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
+ +EPE LRKLFIGGLDYRT D+ LKA FE+WG IVDVVVMKDP TKRSRGFGFITYS+S
Sbjct: 16 EITEPEQLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQS 75
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYF 142
M+D A RPH+IDGR VE KRAVPR+ VK V ++ ++ +YF
Sbjct: 76 YMIDNAQDARPHKIDGRTVEPKRAVPRQEIDAPNAGATVKKLFVGGLRDDHDEECLREYF 135
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+G I VN+V++K+TG KRGFAFIEFDDYD VDKI+L K
Sbjct: 136 KDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQK 176
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GGL +++ L+ +F+ +G+IV V ++ D T + RGF FI + + VD+
Sbjct: 113 TVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKI 172
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I + ++ K+A+ ++
Sbjct: 173 ILQKNHTIKNKSLDVKKAIAKQ 194
>gi|189234126|ref|XP_969016.2| PREDICTED: similar to mammalian A1, A2 /B1 hnRNP homologue
[Tribolium castaneum]
gi|270002487|gb|EEZ98934.1| hypothetical protein TcasGA2_TC004556 [Tribolium castaneum]
Length = 338
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 119/164 (72%), Gaps = 15/164 (9%)
Query: 33 EDSQCSEPE--SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
EDS ++PE RKLFIGGLDYRT D+SLK FE+WGEIVDVVVMKDP TKRSRGFGFI
Sbjct: 6 EDSNDNKPEHEQYRKLFIGGLDYRTTDESLKKHFEKWGEIVDVVVMKDPTTKRSRGFGFI 65
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQMD 140
TYS + MVD+A ++RPH++DGRVVE KRAVPR+ VK V ++ +E+ D
Sbjct: 66 TYSRAHMVDDAQNDRPHKVDGRVVEPKRAVPRQDIGRPEAGATVKKLFVGGLKDDVEEED 125
Query: 141 Y---FGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
F YGTI S +VT+K+TG KRGF FIEF+DYD VDKI L
Sbjct: 126 LRECFKSYGTILSCTIVTDKDTGKKRGFGFIEFEDYDPVDKICL 169
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 30 KAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ PE+ ++KLF+GGL ++ L+ F+ +G I+ ++ D T + RG
Sbjct: 93 RAVPRQDIGRPEAGATVKKLFVGGLKDDVEEEDLRECFKSYGTILSCTIVTDKDTGKKRG 152
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAV 120
FGFI + + VD+ R H+I G+ ++ K+A+
Sbjct: 153 FGFIEFEDYDPVDKICLYRHHQIHGKHIDVKKAL 186
>gi|357619641|gb|EHJ72131.1| heterogeneous nuclear ribonucleoprotein A1 [Danaus plexippus]
Length = 315
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/162 (59%), Positives = 120/162 (74%), Gaps = 13/162 (8%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
D EPE RK+FIGGL+YRT+D+SLKA FE+WGEIVDVVVMKDP TKRSRGFGFITYS
Sbjct: 7 DDGFDEPEVHRKIFIGGLNYRTSDESLKAHFEKWGEIVDVVVMKDPKTKRSRGFGFITYS 66
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-D 140
++ MVD+A NRPH IDGR+VETKRAV R+ V+++ K EQ+ +
Sbjct: 67 KAHMVDDAQLNRPHRIDGRMVETKRAVARQDIKNPEAGATVKKLFIGGIKDDHDEEQLRE 126
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD 182
YF YG +++V++VT+K TG KRGF F+EFDDYD VDKI L+
Sbjct: 127 YFSNYGNVQNVSIVTDKGTGKKRGFGFVEFDDYDPVDKICLN 168
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 30 KAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ PE+ ++KLFIGG+ +++ L+ +F +G + +V ++ D T + RG
Sbjct: 91 RAVARQDIKNPEAGATVKKLFIGGIKDDHDEEQLREYFSNYGNVQNVSIVTDKGTGKKRG 150
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
FGF+ + + VD+ N PH+I+G+ ++ K+A+P++
Sbjct: 151 FGFVEFDDYDPVDKICLNAPHKINGKQLDVKKALPKD 187
>gi|291243889|ref|XP_002741832.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Saccoglossus kowalevskii]
Length = 398
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/162 (58%), Positives = 118/162 (72%), Gaps = 13/162 (8%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
M D +EPE LRKLFIGGL+Y T DDSLK F +WGEIVD VVMKDP TK+SRGFGFIT
Sbjct: 1 MTDESINEPEQLRKLFIGGLNYETTDDSLKGHFSEWGEIVDCVVMKDPNTKKSRGFGFIT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVK--------VRRV----TKVQIALEQM 139
Y + MVD+AM +RPH+IDGR VE KRAV RE V+++ K + + +
Sbjct: 61 YKRASMVDDAMRSRPHKIDGREVEPKRAVAREESGNPLAHMLVKKIFVGGIKEDTSEDHL 120
Query: 140 -DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
DYF +YG+IESV+++++K+TG KRGFAF+ FDD+D VDKIV
Sbjct: 121 RDYFSKYGSIESVDVISDKDTGKKRGFAFVTFDDHDPVDKIV 162
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
++K+F+GG+ T++D L+ +F ++G I V V+ D T + RGF F+T+ + VD+ +
Sbjct: 103 VKKIFVGGIKEDTSEDHLRDYFSKYGSIESVDVISDKDTGKKRGFAFVTFDDHDPVDKIV 162
Query: 103 SNRPHEIDGRVVETKRAVPRE 123
+ H I+ E K+AVP++
Sbjct: 163 GLKYHTINDHKSEVKKAVPKQ 183
>gi|312379326|gb|EFR25637.1| hypothetical protein AND_08860 [Anopheles darlingi]
Length = 357
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 125/173 (72%), Gaps = 13/173 (7%)
Query: 29 NKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFG 88
N +D + EPE LRKLFIGGLDYRT DD+LKA+FE+WG++VDVVVMKDP TKRSRGFG
Sbjct: 14 NGRNDDDEIREPEHLRKLFIGGLDYRTTDDTLKAYFEKWGKVVDVVVMKDPKTKRSRGFG 73
Query: 89 FITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ 138
FITYS+S M+D+ +NRPH+IDGRVVE KRAVPR+ VK V ++ ++
Sbjct: 74 FITYSKSYMIDDTQANRPHKIDGRVVEPKRAVPRQDINRPEAGSSVKKLFVGGLRDDFDE 133
Query: 139 ---MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+YF +YG + S +VT+K+ G KRGF F+EFDDYD VDKI+L K ++
Sbjct: 134 EHLREYFSKYGNVISACIVTDKDNGKKRGFGFVEFDDYDPVDKIILQKSHTIQ 186
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 30 KAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ + PE S++KLF+GGL +++ L+ +F ++G ++ ++ D + RG
Sbjct: 103 RAVPRQDINRPEAGSSVKKLFVGGLRDDFDEEHLREYFSKYGNVISACIVTDKDNGKKRG 162
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
FGF+ + + VD+ + + H I ++++ K+A+P++
Sbjct: 163 FGFVEFDDYDPVDKIILQKSHTIQNKLLDVKKALPKQ 199
>gi|170030552|ref|XP_001843152.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167867828|gb|EDS31211.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 371
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 122/168 (72%), Gaps = 13/168 (7%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
D + EPE LRKLFIGGLDYRT D++LKA+FE+WG++VDVVVMKDP TKRSRGFGFITYS
Sbjct: 14 DEEIREPEHLRKLFIGGLDYRTTDETLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYS 73
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MD 140
+ MVDEA RPH+IDGRVVE KRAVPR+ VK V ++ ++ D
Sbjct: 74 KPYMVDEAQQKRPHKIDGRVVEPKRAVPRQDINRPEAGASVKKLFVGGLRDDFDEEHLRD 133
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
YFG++G + S +VT KE+G KRGF F+EFDDYD VDKI+L K ++
Sbjct: 134 YFGKFGNVISACIVTEKESGKKRGFGFVEFDDYDPVDKIILQKSHTIQ 181
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 30 KAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ + PE S++KLF+GGL +++ L+ +F ++G ++ ++ + + + RG
Sbjct: 98 RAVPRQDINRPEAGASVKKLFVGGLRDDFDEEHLRDYFGKFGNVISACIVTEKESGKKRG 157
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
FGF+ + + VD+ + + H I ++++ K+A+P++
Sbjct: 158 FGFVEFDDYDPVDKIILQKSHTIQNKMLDVKKALPKQ 194
>gi|328724063|ref|XP_001946404.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 290
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 99/171 (57%), Positives = 121/171 (70%), Gaps = 15/171 (8%)
Query: 37 CSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESK 96
SEPE RKLFIGGLD+ T DDSLKAFFEQWG+IVD VV+KDP +KRSR FGFITYS+S
Sbjct: 3 SSEPEKYRKLFIGGLDFTTTDDSLKAFFEQWGKIVDYVVIKDPKSKRSRRFGFITYSQSS 62
Query: 97 MVDEAMSNRPHEIDGRVVETKRAVPR-EVKVRRVT-----------KVQIALEQMDYFGQ 144
MVD+AMSNRPH+IDGR VETKRAVP E+K T K Q + ++YFG+
Sbjct: 63 MVDQAMSNRPHQIDGREVETKRAVPPDEIKKSDTTVSANRIFVTGIKNQSENDLLEYFGK 122
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVIN 195
+G I + +VT+K G +RGF FIE+DD D VDK +L V +VD E ++
Sbjct: 123 FGNITKITIVTDK-GGQRRGFGFIEYDDTDSVDKAIL--VKSHQVDGEKLD 170
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S ++F+ G+ ++ +D L+ +F ++G I + ++ D +R RGFGFI Y ++ VD+A
Sbjct: 99 SANRIFVTGIKNQSENDLLE-YFGKFGNITKITIVTDKGGQR-RGFGFIEYDDTDSVDKA 156
Query: 102 MSNRPHEIDGRVVETKRAVPR 122
+ + H++DG ++ ++++ R
Sbjct: 157 ILVKSHQVDGEKLDVEKSISR 177
>gi|347967733|ref|XP_563821.4| AGAP002374-PA [Anopheles gambiae str. PEST]
gi|333468325|gb|EAL40938.4| AGAP002374-PA [Anopheles gambiae str. PEST]
Length = 362
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 126/173 (72%), Gaps = 13/173 (7%)
Query: 29 NKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFG 88
N +D + EPE LRKLFIGGLDYRT DD+LKA+FE+WG++VDVVVMKDP TKRSRGFG
Sbjct: 14 NGRNDDDEIREPEHLRKLFIGGLDYRTTDDTLKAYFEKWGKVVDVVVMKDPKTKRSRGFG 73
Query: 89 FITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ 138
FITYS+S M+D+A ++RPH+IDGRVVE KRAVPR+ VK V ++ ++
Sbjct: 74 FITYSKSYMIDDAQASRPHKIDGRVVEPKRAVPRQDINRPEAGSSVKKLFVGGLRDDFDE 133
Query: 139 ---MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+YF +YG + S +VT+K+ G KRGF F+EFDDYD VDKI+L K ++
Sbjct: 134 EHLREYFSKYGNVISACIVTDKDNGKKRGFGFVEFDDYDPVDKIILQKSHTIQ 186
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 30 KAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ + PE S++KLF+GGL +++ L+ +F ++G ++ ++ D + RG
Sbjct: 103 RAVPRQDINRPEAGSSVKKLFVGGLRDDFDEEHLREYFSKYGNVISACIVTDKDNGKKRG 162
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
FGF+ + + VD+ + + H I ++++ K+A+P++
Sbjct: 163 FGFVEFDDYDPVDKIILQKSHTIQNKLLDVKKALPKQ 199
>gi|157126218|ref|XP_001660854.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108873325|gb|EAT37550.1| AAEL010467-PB [Aedes aegypti]
Length = 348
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/167 (59%), Positives = 122/167 (73%), Gaps = 13/167 (7%)
Query: 35 SQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSE 94
S+ EPE LRKLFIGGLDYRT D++LKA+FE+WG++VDVVVMKDP TKRSRGFGFITYS+
Sbjct: 3 SEIREPEHLRKLFIGGLDYRTTDETLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYSK 62
Query: 95 SKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDY 141
MVDEA + RPH+IDGRVVE KRAVPR+ VK V ++ ++ DY
Sbjct: 63 PYMVDEAQNKRPHKIDGRVVEPKRAVPRQDINRPEAGASVKKLFVGGLRDDFDEEHLRDY 122
Query: 142 FGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
FG +G + S +VT+KE G KRGF F+EFDDYD VDKI+L K ++
Sbjct: 123 FGAFGNVISACIVTDKENGKKRGFGFVEFDDYDPVDKIILQKSHTIQ 169
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 30 KAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ + PE S++KLF+GGL +++ L+ +F +G ++ ++ D + RG
Sbjct: 86 RAVPRQDINRPEAGASVKKLFVGGLRDDFDEEHLRDYFGAFGNVISACIVTDKENGKKRG 145
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
FGF+ + + VD+ + + H I ++++ K+A+P++
Sbjct: 146 FGFVEFDDYDPVDKIILQKSHTIQNKMLDVKKALPKQ 182
>gi|157126220|ref|XP_001660855.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108873326|gb|EAT37551.1| AAEL010467-PA [Aedes aegypti]
Length = 354
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/167 (59%), Positives = 122/167 (73%), Gaps = 13/167 (7%)
Query: 35 SQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSE 94
S+ EPE LRKLFIGGLDYRT D++LKA+FE+WG++VDVVVMKDP TKRSRGFGFITYS+
Sbjct: 3 SEIREPEHLRKLFIGGLDYRTTDETLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYSK 62
Query: 95 SKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDY 141
MVDEA + RPH+IDGRVVE KRAVPR+ VK V ++ ++ DY
Sbjct: 63 PYMVDEAQNKRPHKIDGRVVEPKRAVPRQDINRPEAGASVKKLFVGGLRDDFDEEHLRDY 122
Query: 142 FGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
FG +G + S +VT+KE G KRGF F+EFDDYD VDKI+L K ++
Sbjct: 123 FGAFGNVISACIVTDKENGKKRGFGFVEFDDYDPVDKIILQKSHTIQ 169
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 30 KAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ + PE S++KLF+GGL +++ L+ +F +G ++ ++ D + RG
Sbjct: 86 RAVPRQDINRPEAGASVKKLFVGGLRDDFDEEHLRDYFGAFGNVISACIVTDKENGKKRG 145
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
FGF+ + + VD+ + + H I ++++ K+A+P++
Sbjct: 146 FGFVEFDDYDPVDKIILQKSHTIQNKMLDVKKALPKQ 182
>gi|193688245|ref|XP_001946219.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Acyrthosiphon pisum]
Length = 350
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/156 (58%), Positives = 111/156 (71%), Gaps = 13/156 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLF+GGLDY+T D++LK +FEQWGEI+DVVVMKDP TKRSRGFGFITY+ + MV
Sbjct: 3 EPEHLRKLFVGGLDYKTTDENLKKYFEQWGEIMDVVVMKDPQTKRSRGFGFITYAAAHMV 62
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR----------EVKVRRVTKVQIALEQMD---YFGQY 145
D+A RPH+IDGR VE KRAVP+ VK V + ++ + D YF Y
Sbjct: 63 DDAQGARPHKIDGRTVEPKRAVPKTDIGKPEAGATVKKLFVGLLNDSITEEDLKEYFSPY 122
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
G + S +V +KETG KRGF F+EFDDYD VDKI L
Sbjct: 123 GNVTSAALVVHKETGKKRGFGFVEFDDYDPVDKICL 158
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 30 KAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ + +PE+ ++KLF+G L+ ++ LK +F +G + ++ T + RG
Sbjct: 82 RAVPKTDIGKPEAGATVKKLFVGLLNDSITEEDLKEYFSPYGNVTSAALVVHKETGKKRG 141
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR 127
FGF+ + + VD+ H I G+ ++ K+A+ +E R
Sbjct: 142 FGFVEFDDYDPVDKICLKGSHIIKGKKIDVKKALSKEEMAR 182
>gi|321463296|gb|EFX74313.1| hypothetical protein DAPPUDRAFT_307331 [Daphnia pulex]
Length = 393
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/159 (59%), Positives = 114/159 (71%), Gaps = 13/159 (8%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
+ E E RKLFIGGLDYRT D+SLK FEQWG+IVDVVVMKDP T++SRGFGF+TY+ +
Sbjct: 36 EKPEAEQFRKLFIGGLDYRTTDESLKKHFEQWGQIVDVVVMKDPKTRKSRGFGFVTYARA 95
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQMD---YF 142
MVDEA + RPH +DGR VE KRAVPR+ VK V ++ +E+ D YF
Sbjct: 96 FMVDEAQAARPHRVDGREVEPKRAVPRDLIGKPEASSTVKKLFVGGLRDDVEEEDLQKYF 155
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
+G I SVN+VT KET KRGFAF+EFDDYD VDK+VL
Sbjct: 156 STFGPIASVNVVTEKETNKKRGFAFVEFDDYDPVDKVVL 194
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GGL ++ L+ +F +G I V V+ + T + RGF F+ + + VD+
Sbjct: 133 TVKKLFVGGLRDDVEEEDLQKYFSTFGPIASVNVVTEKETNKKRGFAFVEFDDYDPVDKV 192
Query: 102 MSNRPHEIDGRVVETKRAV 120
+ R H + GR ++ K+A+
Sbjct: 193 VLIRDHTVKGRHLDVKKAI 211
>gi|389608641|dbj|BAM17930.1| heterogeneous nuclear ribonucleoprotein [Papilio xuthus]
Length = 314
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/162 (58%), Positives = 118/162 (72%), Gaps = 13/162 (8%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
D EPE RK+FIGGL+YRT D+SLKA FE+WGEIVDVVVMKD TKRSRGFGFITYS
Sbjct: 8 DDGYEEPEVHRKIFIGGLNYRTTDESLKAHFEKWGEIVDVVVMKDTKTKRSRGFGFITYS 67
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-D 140
++ MVD+A +NRPH ID RVVETKRAV R+ VR++ K +Q+ +
Sbjct: 68 KAHMVDDAQNNRPHTIDSRVVETKRAVARQDIKNPEAGATVRKLFIGGIKDDHTEDQLRE 127
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD 182
YF YG +++V++VT+K TG KRGF F+EFDDYD VDK+ L+
Sbjct: 128 YFSNYGNVQNVSIVTDKATGKKRGFGFVEFDDYDPVDKVCLN 169
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 30 KAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ PE ++RKLFIGG+ +D L+ +F +G + +V ++ D T + RG
Sbjct: 92 RAVARQDIKNPEAGATVRKLFIGGIKDDHTEDQLREYFSNYGNVQNVSIVTDKATGKKRG 151
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
FGF+ + + VD+ N PH+I+G+ ++ K+A+P++
Sbjct: 152 FGFVEFDDYDPVDKVCLNAPHKINGKQLDVKKALPKD 188
>gi|242004925|ref|XP_002423326.1| Nuclear polyadenylated RNA-binding protein, putative [Pediculus
humanus corporis]
gi|212506345|gb|EEB10588.1| Nuclear polyadenylated RNA-binding protein, putative [Pediculus
humanus corporis]
Length = 286
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 117/157 (74%), Gaps = 13/157 (8%)
Query: 35 SQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSE 94
+Q +EPE LRKLFIGGLDY+T D++LK+ FE+WGE+VDVVVMKDP TKRSRGFGFITY++
Sbjct: 27 TQITEPEHLRKLFIGGLDYKTTDETLKSHFEKWGEVVDVVVMKDPKTKRSRGFGFITYAK 86
Query: 95 SKMVDEAMSNRPHEIDGRVVETKRAVPR----------EVKVRRVTKVQIALEQMD---Y 141
+ MVD+A +NRPH++D R VE KRAVPR +K + ++ E+ D +
Sbjct: 87 AHMVDDAQANRPHKVDNRTVEPKRAVPRTESGRPDAGASIKKLFIGGIKDEHEEEDLKEH 146
Query: 142 FGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDK 178
F Q+G I S ++V +K++G K+GFAF+E+DDYD VDK
Sbjct: 147 FKQFGNIVSCSIVVDKDSGKKKGFAFVEYDDYDPVDK 183
>gi|391339574|ref|XP_003744123.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Metaseiulus occidentalis]
Length = 334
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 114/159 (71%), Gaps = 12/159 (7%)
Query: 37 CSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESK 96
SEPE +RKLFIGGLDY+TN+ +LK ++ +WGEI+D VVM DP +KRSRGFGF+TY++S+
Sbjct: 16 SSEPEYMRKLFIGGLDYKTNEVTLKEYYSKWGEIMDCVVMTDPYSKRSRGFGFVTYADSQ 75
Query: 97 MVDEAMSNRPHEIDGRVVETKRAVPRE---------VKVRRVTKVQIALEQMD---YFGQ 144
MVD+AM+ RPH ID R VE KRA+PRE VK V + E D YFG+
Sbjct: 76 MVDQAMAQRPHIIDNRTVEPKRAIPREQSSGDTNMSVKKLFVGGLSTETEAEDLRNYFGK 135
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YG+IE V + T ++TG KRGF F+ FDDYD VDK+VL +
Sbjct: 136 YGSIEEVIIATERDTGRKRGFGFVTFDDYDSVDKVVLQR 174
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S++KLF+GGL T + L+ +F ++G I +V++ + T R RGFGF+T+ + VD+
Sbjct: 111 SVKKLFVGGLSTETEAEDLRNYFGKYGSIEEVIIATERDTGRKRGFGFVTFDDYDSVDKV 170
Query: 102 MSNRPHEIDGRVVETKRAV 120
+ R H I G+ E K+A+
Sbjct: 171 VLQRHHMIKGKRTEVKKAL 189
>gi|392332853|ref|XP_003752716.1| PREDICTED: regulator of G-protein signaling protein-like [Rattus
norvegicus]
Length = 1173
Score = 179 bits (454), Expect = 1e-42, Method: Composition-based stats.
Identities = 87/165 (52%), Positives = 111/165 (67%), Gaps = 13/165 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 717 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 776
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQ 138
YS + VD AM RPH++DGRVVE KRAV RE V+ V K+ +
Sbjct: 777 YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 836
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 837 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 881
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 818 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 877
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 878 VVQKYHTINGHNCEVKKALSKQ 899
>gi|71895177|ref|NP_001026424.1| heterogeneous nuclear ribonucleoprotein A1 [Gallus gallus]
gi|53130302|emb|CAG31480.1| hypothetical protein RCJMB04_6o1 [Gallus gallus]
Length = 368
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/158 (55%), Positives = 111/158 (70%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYFGQY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFGQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +F Q+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFGQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|324510912|gb|ADY44557.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Ascaris suum]
Length = 323
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 106/156 (67%), Gaps = 13/156 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE RK+FIGGL T D+SLK F+ +WGE++D +VMKDP TKRSRGFGF++Y++ MV
Sbjct: 17 EPEQFRKMFIGGLSSATTDESLKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMV 76
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-----------LEQM--DYFGQY 145
DEAM+NRPH +DG+ V+ KRAVPR+ R V EQM +YFG++
Sbjct: 77 DEAMANRPHIVDGKTVDPKRAVPRDASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKF 136
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
GT+ ++ +K TG RGFAFI FDDYD VDK VL
Sbjct: 137 GTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVL 172
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 46/82 (56%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S ++L++ G+ + L+ +F ++G ++ ++ D T + RGF FIT+ + VD+
Sbjct: 111 SSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKC 170
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+I + K+A+ +E
Sbjct: 171 VLLKSHQISNFRCDVKKALSKE 192
>gi|324520993|gb|ADY47759.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Ascaris suum]
Length = 339
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 107/156 (68%), Gaps = 13/156 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE RK+FIGGL T D+SLK F+ +WGE++D +VMKDP TKRSRGFGF++Y++ MV
Sbjct: 11 EPEQFRKMFIGGLSSATTDESLKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMV 70
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKV-----------QIALEQM--DYFGQY 145
DEAM+NRPH +DG+ V+ KRAVPR+ R V + EQM +YFG++
Sbjct: 71 DEAMANRPHIVDGKTVDPKRAVPRDASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKF 130
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
GT+ ++ +K TG RGFAFI FDDYD VDK VL
Sbjct: 131 GTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVL 166
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 20 TVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKD 78
TV P + A SQ +E S ++L++ G+ + L+ +F ++G ++ ++ D
Sbjct: 85 TVDPKRAVPRDA---SQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIIND 141
Query: 79 PVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
T + RGF FIT+ + VD+ + + H+I + K+A+ +E
Sbjct: 142 KNTGKPRGFAFITFDDYDPVDKCVLLKSHQISNFRCDVKKALSKE 186
>gi|324505861|gb|ADY42513.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 357
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 106/156 (67%), Gaps = 13/156 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE RK+FIGGL T D+SLK F+ +WGE++D +VMKDP TKRSRGFGF++Y++ MV
Sbjct: 17 EPEQFRKMFIGGLSSATTDESLKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMV 76
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-----------LEQM--DYFGQY 145
DEAM+NRPH +DG+ V+ KRAVPR+ R V EQM +YFG++
Sbjct: 77 DEAMANRPHIVDGKTVDPKRAVPRDASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKF 136
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
GT+ ++ +K TG RGFAFI FDDYD VDK VL
Sbjct: 137 GTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVL 172
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 20 TVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKD 78
TV P + A SQ +E S ++L++ G+ + L+ +F ++G ++ ++ D
Sbjct: 91 TVDPKRAVPRDA---SQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIIND 147
Query: 79 PVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
T + RGF FIT+ + VD+ + + H+I + K+A+ +E
Sbjct: 148 KNTGKPRGFAFITFDDYDPVDKCVLLKSHQISNFRCDVKKALSKE 192
>gi|324504581|gb|ADY41977.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 345
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 106/156 (67%), Gaps = 13/156 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE RK+FIGGL T D+SLK F+ +WGE++D +VMKDP TKRSRGFGF++Y++ MV
Sbjct: 17 EPEQFRKMFIGGLSSATTDESLKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMV 76
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-----------LEQM--DYFGQY 145
DEAM+NRPH +DG+ V+ KRAVPR+ R V EQM +YFG++
Sbjct: 77 DEAMANRPHIVDGKTVDPKRAVPRDASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKF 136
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
GT+ ++ +K TG RGFAFI FDDYD VDK VL
Sbjct: 137 GTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVL 172
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 20 TVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKD 78
TV P + A SQ +E S ++L++ G+ + L+ +F ++G ++ ++ D
Sbjct: 91 TVDPKRAVPRDA---SQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIIND 147
Query: 79 PVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
T + RGF FIT+ + VD+ + + H+I + K+A+ +E
Sbjct: 148 KNTGKPRGFAFITFDDYDPVDKCVLLKSHQISNFRCDVKKALSKE 192
>gi|326936051|ref|XP_003214072.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like, partial
[Meleagris gallopavo]
Length = 176
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/161 (54%), Positives = 111/161 (68%), Gaps = 13/161 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 16 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEV 75
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYFGQY
Sbjct: 76 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFGQY 135
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVV 186
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ +
Sbjct: 136 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQNTTL 176
>gi|313226215|emb|CBY21358.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 113/164 (68%), Gaps = 17/164 (10%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE +RKLFIGGL Y T +DSL FF +WG++ D VVM+DP TKRSRGFGF+T+ +++MV
Sbjct: 7 EPEQIRKLFIGGLSYNTTEDSLSNFFSKWGKLTDCVVMQDPATKRSRGFGFVTFEKAQMV 66
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM---------------DYFG 143
D+ MSNRPH++DGR VE KRAV RE R + ++++M +YF
Sbjct: 67 DDCMSNRPHKLDGREVEAKRAVSREESHR--PGIHKSVKRMFMGGIKENVTSEDVTEYFE 124
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+YG +ESV ++ +K +G KRGF F+ FDDYDVVDKIV + V+
Sbjct: 125 KYGKVESVELLQDKASGKKRGFGFVNFDDYDVVDKIVQTRRHVI 168
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 54/89 (60%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+S++++F+GG+ + + +FE++G++ V +++D + + RGFGF+ + + +VD+
Sbjct: 100 KSVKRMFMGGIKENVTSEDVTEYFEKYGKVESVELLQDKASGKKRGFGFVNFDDYDVVDK 159
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV 129
+ R H I G +E +A +E + R+
Sbjct: 160 IVQTRRHVISGVSIEVSKAFSKEDQTRKA 188
>gi|313240342|emb|CBY32684.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 113/164 (68%), Gaps = 17/164 (10%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE +RKLFIGGL Y T +DSL FF +WG++ D VVM+DP TKRSRGFGF+T+ +++MV
Sbjct: 7 EPEQIRKLFIGGLSYNTTEDSLSNFFSKWGKLTDCVVMQDPATKRSRGFGFVTFEKAQMV 66
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM---------------DYFG 143
D+ MSNRPH++DGR VE KRAV RE R + ++++M +YF
Sbjct: 67 DDCMSNRPHKLDGREVEAKRAVSREESHR--PGIHKSVKRMFMGGIKENVTSEDVTEYFE 124
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+YG +ESV ++ +K +G KRGF F+ FDDYDVVDKIV + V+
Sbjct: 125 KYGKVESVELLQDKASGKKRGFGFVNFDDYDVVDKIVQTRRHVI 168
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 54/89 (60%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+S++++F+GG+ + + +FE++G++ V +++D + + RGFGF+ + + +VD+
Sbjct: 100 KSVKRMFMGGIKENVTSEDVTEYFEKYGKVESVELLQDKASGKKRGFGFVNFDDYDVVDK 159
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV 129
+ R H I G +E +A +E + R+
Sbjct: 160 IVQTRRHVISGVSIEVSKAFSKEDQTRKA 188
>gi|195109789|ref|XP_001999464.1| GI24524 [Drosophila mojavensis]
gi|193916058|gb|EDW14925.1| GI24524 [Drosophila mojavensis]
Length = 462
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 120/181 (66%), Gaps = 19/181 (10%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
ED C E E LRKLFIGGL T ++SLK F+ QWG++VDVVVM+D TKRSRGFGFITY
Sbjct: 27 EDDIC-ELEHLRKLFIGGLAPYTTEESLKVFYSQWGKVVDVVVMRDAATKRSRGFGFITY 85
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ-------M 139
++S MVD A NRPH IDG+ VE KRA+PR + R T + + L+
Sbjct: 86 TKSAMVDTAQENRPHIIDGKTVEAKRALPRPERETRETNISVKKLFVGGLKDNHDEDCLR 145
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD-----KVVVLEVDQEVI 194
+YF Q+G + SV ++T+K TG +RGFAFIEFDDYD VDK +L K V+++V + +
Sbjct: 146 EYFLQFGNVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAILQRQHSIKYVLVDVKKSIY 205
Query: 195 N 195
N
Sbjct: 206 N 206
>gi|387018108|gb|AFJ51172.1| Heterogeneous nuclear ribonucleoprotein A3-like [Crotalus
adamanteus]
Length = 225
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 112/165 (67%), Gaps = 13/165 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGALTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQ 138
YS + VD AMS RPH++DGRVVE KRAV RE V+ V K+ +
Sbjct: 61 YSCVEEVDAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQ 183
>gi|431921599|gb|ELK18951.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Pteropus alecto]
Length = 298
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/162 (54%), Positives = 112/162 (69%), Gaps = 13/162 (8%)
Query: 35 SQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSE 94
S EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+
Sbjct: 14 SSPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAT 73
Query: 95 SKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDY 141
+ VD AM+ RPH++DGRVVE KRAV RE VK V ++ E+ DY
Sbjct: 74 VEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDY 133
Query: 142 FGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
F QYG IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 134 FEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 175
>gi|348521586|ref|XP_003448307.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Oreochromis niloticus]
Length = 332
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL+A FEQWG + D VVM+DP +KRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-------------LEQMDYFGQY 145
D AMS RPH++DGRVVE KRAV RE R + + DYF Q+
Sbjct: 69 DAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHITVKKIFVGGIKEDTEESHLRDYFQQF 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE ++++T++ TG KRGFAF+ FDD+D VD+IV+ K
Sbjct: 129 GKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQK 166
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 50/82 (60%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + L+ +F+Q+G+I + +M D T + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEESHLRDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRI 162
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+ E ++A+ ++
Sbjct: 163 VIQKYHTINSHNCEVRKALTKQ 184
>gi|195450939|ref|XP_002072698.1| GK13742 [Drosophila willistoni]
gi|194168783|gb|EDW83684.1| GK13742 [Drosophila willistoni]
Length = 506
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/183 (50%), Positives = 120/183 (65%), Gaps = 18/183 (9%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
ED E E LRKLFIGGL T ++ LK F+ QWG++VDVVVM+D TKRSRGFGFITY
Sbjct: 28 EDDDICELEHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVMRDATTKRSRGFGFITY 87
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ-------M 139
++S MVD+A NRPH IDG+ VE KRA+PR + R T + + L+
Sbjct: 88 TKSTMVDKAQENRPHVIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLR 147
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD-----KVVVLEVDQEVI 194
+YF Q+G + SV ++T+K TG +RGFAFIEFDDYD VDK +L K V+++V + +
Sbjct: 148 EYFVQFGHVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAILQKQHSIKYVLVDVKKSIY 207
Query: 195 NGE 197
N E
Sbjct: 208 NLE 210
>gi|432865306|ref|XP_004070518.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Oryzias latipes]
Length = 329
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL+A FEQWG + D VVM+DP +KRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQEV 67
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-------------LEQMDYFGQY 145
D AMS RPH++DGRVVE KRAV RE R + + DYF Q+
Sbjct: 68 DAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHITVKKIFVGGIKEDTEESHLRDYFQQF 127
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE ++++T++ TG KRGFAF+ FDD+D VD+IV+ K
Sbjct: 128 GKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQK 165
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 50/82 (60%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + L+ +F+Q+G+I + +M D T + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEESHLRDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+ E ++A+ ++
Sbjct: 162 VIQKYHTINSHNCEVRKALTKQ 183
>gi|154183823|gb|ABS70764.1| Hnrp1 [Haplochromis burtoni]
Length = 289
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL+A FEQWG + D VVM+DP +KRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-------------LEQMDYFGQY 145
D AMS RPH++DGRVVE KRAV RE R + + DYF Q+
Sbjct: 69 DAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHITVKKIFVGGIKEDTEESHLRDYFQQF 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE ++++T++ TG KRGFAF+ FDD+D VD+IV+ K
Sbjct: 129 GKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQK 166
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 50/82 (60%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + L+ +F+Q+G+I + +M D T + RGF F+T+ + VD
Sbjct: 103 TVKKIFVGGIKEDTEESHLRDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRI 162
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+ E ++A+ ++
Sbjct: 163 VIQKYHTINSHNCEVRKALTKQ 184
>gi|324508919|gb|ADY43760.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 378
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 109/166 (65%), Gaps = 16/166 (9%)
Query: 29 NKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFG 88
N AM D EPE RK+FIGGL T D++L+ F+ +WGE+VD VVM+DP TKRSRGFG
Sbjct: 9 NGAMADL---EPEQFRKMFIGGLTSTTTDETLREFYSKWGELVDCVVMRDPTTKRSRGFG 65
Query: 89 FITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKV-----------QIALE 137
F++YS+ VDEAM+NRPH IDG+ V+ KRAVPRE R + + E
Sbjct: 66 FVSYSKQSEVDEAMANRPHVIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREDHTE 125
Query: 138 QM--DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
QM D+FG+YG I ++ +K TG RGFAF+ FDDYD VDK +L
Sbjct: 126 QMFKDHFGKYGNIIKCEIIADKATGKPRGFAFVTFDDYDAVDKCIL 171
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 33 EDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
E SQ SE S ++L++ G+ + K F ++G I+ ++ D T + RGF F+T
Sbjct: 100 EQSQRSEANISSKRLYVSGVREDHTEQMFKDHFGKYGNIIKCEIIADKATGKPRGFAFVT 159
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ + VD+ + + H I+ + K+A+ +E
Sbjct: 160 FDDYDAVDKCILIKSHMINNARCDVKKALSKE 191
>gi|187607268|ref|NP_001120028.1| heterogeneous nuclear ribonucleoprotein A3 [Xenopus (Silurana)
tropicalis]
gi|165971520|gb|AAI58334.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
gi|170284841|gb|AAI61197.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
Length = 383
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FEQWG++ D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 22 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-------------LEQMDYFGQY 145
D AMS RPH++DGRVVE KRAV RE R + + DYF Y
Sbjct: 82 DAAMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFQSY 141
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 142 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 179
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + L+ +F+ +G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 116 TVKKIFVGGIKEDTEEYHLRDYFQSYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 175
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 176 VVQKYHTINGHNCEVKKALSKQ 197
>gi|195054712|ref|XP_001994267.1| GH23661 [Drosophila grimshawi]
gi|193896137|gb|EDV95003.1| GH23661 [Drosophila grimshawi]
Length = 479
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 119/181 (65%), Gaps = 19/181 (10%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
ED C E E LRKLFIGGL T ++ LK F+ QWG++VDVVVM+D TKRSRGFGFITY
Sbjct: 27 EDDIC-ELEHLRKLFIGGLAPYTTEEGLKVFYSQWGKVVDVVVMRDAATKRSRGFGFITY 85
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ-------M 139
++S MVD A NRPH IDG+ VE KRA+PR + R T + + L+
Sbjct: 86 TKSAMVDTAQENRPHIIDGKTVEAKRALPRPERETRETNISVKKLFVGGLKDNHDEDCLR 145
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD-----KVVVLEVDQEVI 194
+YF Q+G + SV ++T+K TG +RGFAFIEFDDYD VDK +L K V+++V + +
Sbjct: 146 EYFLQFGNVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAILQRQHSIKYVLVDVKKSIY 205
Query: 195 N 195
N
Sbjct: 206 N 206
>gi|195392302|ref|XP_002054798.1| GJ22593 [Drosophila virilis]
gi|194152884|gb|EDW68318.1| GJ22593 [Drosophila virilis]
Length = 474
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 119/181 (65%), Gaps = 19/181 (10%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
ED C E E LRKLFIGGL T ++ LK F+ QWG++VDVVVM+D TKRSRGFGFITY
Sbjct: 25 EDDIC-ELEHLRKLFIGGLAPYTTEEGLKVFYSQWGKVVDVVVMRDAATKRSRGFGFITY 83
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ-------M 139
++S MVD A NRPH IDG+ VE KRA+PR + R T + + L+
Sbjct: 84 TKSAMVDTAQENRPHIIDGKTVEAKRALPRPERETRETNISVKKLFVGGLKDNHDEDCLR 143
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD-----KVVVLEVDQEVI 194
+YF Q+G + SV ++T+K TG +RGFAFIEFDDYD VDK +L K V+++V + +
Sbjct: 144 EYFLQFGNVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAILQRQHSIKYVLVDVKKSIY 203
Query: 195 N 195
N
Sbjct: 204 N 204
>gi|195503950|ref|XP_002098871.1| GE10609 [Drosophila yakuba]
gi|194184972|gb|EDW98583.1| GE10609 [Drosophila yakuba]
Length = 473
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 115/171 (67%), Gaps = 13/171 (7%)
Query: 26 MIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSR 85
+++ ED E E LRKLFIGGL T +D+LK F+ QWG++VDVVVM+D TKRSR
Sbjct: 15 LVVISEREDDDICELEHLRKLFIGGLAPYTTEDNLKVFYGQWGKVVDVVVMRDAATKRSR 74
Query: 86 GFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ- 138
GFGFITY++S MVD+A NRPH IDG+ VE KRA+PR + R T + + L+
Sbjct: 75 GFGFITYTKSLMVDKAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDN 134
Query: 139 ------MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+YF Q+G + SV ++T+K TG +RGFAF+EFDDYD VDK +L K
Sbjct: 135 HDEDCLREYFLQFGRVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 185
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 49/79 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S++KLF+GGL ++D L+ +F Q+G +V V ++ D T + RGF F+ + + VD+A
Sbjct: 122 SVKKLFVGGLKDNHDEDCLREYFLQFGRVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA 181
Query: 102 MSNRPHEIDGRVVETKRAV 120
+ + H I V+ K+++
Sbjct: 182 ILKKQHSIKYVHVDVKKSI 200
>gi|49402291|ref|NP_956398.1| heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
gi|27882514|gb|AAH44442.1| Heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
Length = 422
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 115/175 (65%), Gaps = 13/175 (7%)
Query: 22 VPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVT 81
V I+ + ++ Q EPE LRKLFIGGL + T DDSL+A FEQWG + D VVMKDP T
Sbjct: 11 VARTEIVGRMSKEGQPREPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNT 70
Query: 82 KRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTK 131
KRSRGFGF+TYS V+ +M RPH++DGR+VE KRAV RE VK V
Sbjct: 71 KRSRGFGFVTYSSVDEVNASMDARPHKVDGRLVEPKRAVSREDSSKPFAHTTVKKIFVGG 130
Query: 132 VQIALEQ---MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
++ E+ DYF Q+G IE V ++ + +TG KRGFAF+ FDD+D VD+IV+ K
Sbjct: 131 IKDDTEENHLRDYFDQFGKIEVVEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQK 185
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Query: 30 KAMEDSQCSEP---ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ S+P +++K+F+GG+ T ++ L+ +F+Q+G+I V +M D T RG
Sbjct: 107 RAVSREDSSKPFAHTTVKKIFVGGIKDDTEENHLRDYFDQFGKIEVVEIMVDHKTGNKRG 166
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
F F+T+ + VD + + H ++G E ++A+ ++
Sbjct: 167 FAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKALSKQ 203
>gi|390464603|ref|XP_003733247.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like, partial [Callithrix jacchus]
Length = 288
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-------------LEQMDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R + + DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPSAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQ-CSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ S +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPSAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|194745069|ref|XP_001955015.1| GF18563 [Drosophila ananassae]
gi|190628052|gb|EDV43576.1| GF18563 [Drosophila ananassae]
Length = 474
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 121/188 (64%), Gaps = 19/188 (10%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
ED C E E LRKLFIGGL T ++ LK F+ QWG++VDVVVM+D TKRSRGFGFITY
Sbjct: 26 EDDIC-ELEHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVMRDATTKRSRGFGFITY 84
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ-------M 139
++S MVD+A NRPH IDG+ VE KRA+PR + R T + + L+
Sbjct: 85 TKSLMVDKAQENRPHVIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLR 144
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD-----KVVVLEVDQEVI 194
+YF Q+G + SV ++T+K TG +RGFAFIEFDDYD VDK +L K V ++V + +
Sbjct: 145 EYFMQFGNVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAILQKQHSIKYVHVDVKKSIY 204
Query: 195 NGEDHRTH 202
N E H
Sbjct: 205 NLEKKERH 212
>gi|148697232|gb|EDL29179.1| mCG1035404 [Mus musculus]
Length = 239
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 111/165 (67%), Gaps = 13/165 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQ 138
YS + VD AM RPH++DGRVVE KRAV RE V+ V K+ +
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQ 183
>gi|349804307|gb|AEQ17626.1| putative heterogeneous nuclear ribonucleoprotein A3 [Hymenochirus
curtipes]
Length = 249
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FEQWG++ D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQMDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V K+ + DYF Y
Sbjct: 69 DAAMTARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 166
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + L+ +FE +G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 103 TVKKIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 162
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 163 VVQKYHTINGHNCEVKKALSKQ 184
>gi|387016398|gb|AFJ50318.1| HNRPA1 protein [Crotalus adamanteus]
Length = 212
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL+ FEQWG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 22 EPEQLRKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEV 81
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 82 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 141
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 142 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 179
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 91 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 148
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 149 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 197
>gi|20664272|pdb|1L3K|A Chain A, Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1
gi|55670114|pdb|1U1K|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtt 7da
Ggg); A Human Telomeric Repeat Containing
7-Deaza-Adenine
gi|55670116|pdb|1U1L|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtt Prn
Ggg); A Human Telomeric Repeat Containing Nebularine
gi|55670118|pdb|1U1M|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta 7gu
Gg); A Human Telomeric Repeat Containing 7-Deaza-Guanine
gi|55670120|pdb|1U1N|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta (Prn)
Gg); A Human Telomeric Repeat Containing Nebularine
gi|55670122|pdb|1U1O|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggttag(Di)g); A Human Telomeric Repeat Containing
Inosine
gi|55670124|pdb|1U1P|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta 2pr
Gg); A Human Telomeric Repeat Containing 2-Aminopurine
gi|55670126|pdb|1U1Q|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggtta(Di)gg); A Human Telomeric Repeat Containing
Inosine
gi|55670128|pdb|1U1R|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggttag(2pr)
G); A Human Telomeric Repeat Containing 2-Aminopurine
Length = 196
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|344255674|gb|EGW11778.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Cricetulus griseus]
Length = 340
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 111/158 (70%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE VK V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|433286562|pdb|2LYV|A Chain A, Solution Structure Of The Two Rrm Domains Of Hnrnp A1
(up1) Using Segmental Isotope Labeling
Length = 197
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 10 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 69
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 70 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 129
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 130 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 167
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 79 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 136
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 137 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 185
>gi|344266091|ref|XP_003405114.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Loxodonta africana]
Length = 320
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|39654464|pdb|1PGZ|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggttag(6-Mi)
G); A Human Telomeric Repeat Containing 6-Methyl-8-(2-
Deoxy-Beta-Ribofuranosyl)isoxanthopteridine (6-Mi)
Length = 195
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 67
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 68 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 127
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 128 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 165
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 77 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 134
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 135 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 183
>gi|198450380|ref|XP_001357960.2| GA19533, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198131011|gb|EAL27096.2| GA19533, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 468
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 116/182 (63%), Gaps = 14/182 (7%)
Query: 16 EVAGTVVPLAMIIN-KAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
E +G P I ED E E LRKLFIGGL T ++ LK F+ QWG++VDVV
Sbjct: 10 ETSGEDPPSTETIEIPDREDDDICELEHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVV 69
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI 134
VM+D TKRSRGFGFITY++S MVD+A NRPH IDG+ VE KRA+PR + R T + +
Sbjct: 70 VMRDAATKRSRGFGFITYTKSAMVDKAQENRPHIIDGKTVEAKRALPRPERETRETNISV 129
Query: 135 ------ALEQ-------MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
L+ +YF Q+G + SV ++T+K TG +RGFAFIEFDDYD VDK +L
Sbjct: 130 KKLFVGGLKDNHDEDCLREYFVQFGRVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAIL 189
Query: 182 DK 183
K
Sbjct: 190 QK 191
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S++KLF+GGL ++D L+ +F Q+G +V V ++ D T + RGF FI + + VD+A
Sbjct: 128 SVKKLFVGGLKDNHDEDCLREYFVQFGRVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKA 187
Query: 102 MSNRPHEIDGRVVETKRAV 120
+ + H I V+ K+++
Sbjct: 188 ILQKQHSIKYVHVDVKKSI 206
>gi|390177202|ref|XP_003736301.1| GA19533, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858945|gb|EIM52374.1| GA19533, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 462
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 116/182 (63%), Gaps = 14/182 (7%)
Query: 16 EVAGTVVPLAMIIN-KAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
E +G P I ED E E LRKLFIGGL T ++ LK F+ QWG++VDVV
Sbjct: 10 ETSGEDPPSTETIEIPDREDDDICELEHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVV 69
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI 134
VM+D TKRSRGFGFITY++S MVD+A NRPH IDG+ VE KRA+PR + R T + +
Sbjct: 70 VMRDAATKRSRGFGFITYTKSAMVDKAQENRPHIIDGKTVEAKRALPRPERETRETNISV 129
Query: 135 ------ALEQ-------MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
L+ +YF Q+G + SV ++T+K TG +RGFAFIEFDDYD VDK +L
Sbjct: 130 KKLFVGGLKDNHDEDCLREYFVQFGRVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKAIL 189
Query: 182 DK 183
K
Sbjct: 190 QK 191
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S++KLF+GGL ++D L+ +F Q+G +V V ++ D T + RGF FI + + VD+A
Sbjct: 128 SVKKLFVGGLKDNHDEDCLREYFVQFGRVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDKA 187
Query: 102 MSNRPHEIDGRVVETKRAV 120
+ + H I V+ K+++
Sbjct: 188 ILQKQHSIKYVHVDVKKSI 206
>gi|344266093|ref|XP_003405115.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Loxodonta africana]
Length = 370
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|444513904|gb|ELV10489.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Tupaia
chinensis]
Length = 432
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 4 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 64 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 124 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 161
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 73 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 130
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 131 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 179
>gi|5542530|pdb|2UP1|A Chain A, Structure Of Up1-Telomeric Dna Complex
gi|39654500|pdb|1PO6|A Chain A, Crystal Structure Of Up1 Complexed With
D(Tagg(6mi)ttaggg): A Human Telomeric Repeat Containing
6-Methyl-8-(2-Deoxy-
Beta-Ribofuranosyl)isoxanthopteridine (6mi)
Length = 183
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 2 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 61
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 62 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 121
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 122 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 159
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 71 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 128
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 129 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 177
>gi|34785465|gb|AAH57655.1| Hnrpa3 protein, partial [Mus musculus]
Length = 303
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 111/165 (67%), Gaps = 13/165 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQ 138
YS + VD AM RPH++DGRVVE KRAV RE V+ V K+ +
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQ 183
>gi|213625123|gb|AAI69881.1| Unknown (protein for MGC:196608) [Xenopus laevis]
Length = 348
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 109/164 (66%), Gaps = 13/164 (7%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FEQWG++ D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 22 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-------------LEQMDYFGQY 145
D +MS RPH++DGRVVE KRAV RE R + + DYF Y
Sbjct: 82 DASMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGY 141
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEV 189
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K + +
Sbjct: 142 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINL 185
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 51/82 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + L+ +FE +G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 116 TVKKIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 175
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+ E K+A+ ++
Sbjct: 176 VVQKYHTINLHNCEVKKALSKQ 197
>gi|147905111|ref|NP_001081320.1| heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Xenopus
laevis]
gi|1710626|sp|P51992.1|RO32_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A3 homolog 2;
AltName: Full=hnRNP A3(B)
gi|214747|gb|AAA49950.1| ribonucleoprotein [Xenopus laevis]
Length = 385
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 112/164 (68%), Gaps = 13/164 (7%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FEQWG++ D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 22 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D +MS RPH++DGRVVE KRAV RE R V ++ E+ DYF Y
Sbjct: 82 DASMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEGY 141
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEV 189
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K + +
Sbjct: 142 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINL 185
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 51/82 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + L+ +FE +G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 116 TVKKIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 175
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+ E K+A+ ++
Sbjct: 176 VVQKYHTINLHNCEVKKALSKQ 197
>gi|395837290|ref|XP_003791571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Otolemur
garnettii]
Length = 347
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 111/165 (67%), Gaps = 13/165 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQ 138
YS + VD AM RPH++DGRVVE KRAV RE V+ V K+ +
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQ 183
>gi|351706129|gb|EHB09048.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 313
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|157831273|pdb|1HA1|A Chain A, Hnrnp A1 (Rbd1,2) From Homo Sapiens
Length = 184
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|194907807|ref|XP_001981631.1| GG12167 [Drosophila erecta]
gi|190656269|gb|EDV53501.1| GG12167 [Drosophila erecta]
Length = 472
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 112/164 (68%), Gaps = 13/164 (7%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
ED E E LRKLFIGGL T +++LK F+ QWG++VDVVVM+D TKRSRGFGFITY
Sbjct: 21 EDDDICELEHLRKLFIGGLAPYTTEENLKVFYGQWGKVVDVVVMRDAATKRSRGFGFITY 80
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ-------M 139
++S MVD+A NRPH IDG+ VE KRA+PR + R T + + L+
Sbjct: 81 TKSLMVDKAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLR 140
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+YF Q+G + SV ++T+K TG +RGFAF+EFDDYD VDK +L K
Sbjct: 141 EYFLQFGRVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 184
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S++KLF+GGL +++ L+ +F Q+G +V V ++ D T + RGF F+ + + VD+A
Sbjct: 121 SVKKLFVGGLKDNHDEECLREYFLQFGRVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA 180
Query: 102 MSNRPHEIDGRVVETKRAV 120
+ + H I V+ K+++
Sbjct: 181 ILKKQHSIKYVHVDVKKSI 199
>gi|223647288|gb|ACN10402.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|223673171|gb|ACN12767.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
Length = 384
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 107/169 (63%), Gaps = 13/169 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
M EPE LRKLFIGGL + T D+SL+A FEQWG + D VVM+DP KRSRGFGF+T
Sbjct: 1 MSKEAPREPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPANKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-------------LEQ 138
Y+ VD AM RPH++DGR+VE KRAV RE R V +
Sbjct: 61 YAGVNEVDAAMEARPHKVDGRLVEPKRAVSREDSSRPGAHVTVKKIFVGGIKEDTEDSHL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
DYF Q+G IE ++++T++ +G KRGFAF+ FDD+D VD+IV+ K L
Sbjct: 121 RDYFEQFGKIEVIDIMTDRNSGKKRGFAFVTFDDHDAVDRIVIQKYHTL 169
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 51/82 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T D L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEDSHLRDYFEQFGKIEVIDIMTDRNSGKKRGFAFVTFDDHDAVDRI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H ++G E ++A+ R+
Sbjct: 162 VIQKYHTLNGHNCEVRKALSRQ 183
>gi|441632410|ref|XP_003252929.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Nomascus leucogenys]
Length = 426
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 62 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 121
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 122 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 181
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 182 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 219
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 131 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 188
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 189 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 237
>gi|74004700|ref|XP_862045.1| PREDICTED: uncharacterized protein LOC608074 isoform 11 [Canis
lupus familiaris]
gi|410968906|ref|XP_003990940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Felis catus]
Length = 356
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 111/165 (67%), Gaps = 13/165 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQ 138
YS + VD AM RPH++DGRVVE KRAV RE V+ V K+ +
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQ 183
>gi|157277969|ref|NP_444493.1| heterogeneous nuclear ribonucleoprotein A3 isoform c [Mus musculus]
gi|162329579|ref|NP_001104765.1| heterogeneous nuclear ribonucleoprotein A3 isoform b [Rattus
norvegicus]
gi|335303045|ref|XP_003359613.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
2 [Sus scrofa]
gi|25991929|gb|AAN76992.1|AF463524_1 ribonucleoprotein heterogeneous nuclear ribonucleoprotein A3 [Mus
musculus]
gi|23274114|gb|AAH23828.1| Hnrpa3 protein [Mus musculus]
gi|34327779|gb|AAQ63631.1| heterogeneous nuclear ribonucleoprotein A3 variant b [Rattus
norvegicus]
gi|111599310|gb|AAI16251.1| Hnrpa3 protein [Mus musculus]
gi|111599547|gb|AAI16252.1| Hnrpa3 protein [Mus musculus]
gi|148695243|gb|EDL27190.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148695244|gb|EDL27191.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148703315|gb|EDL35262.1| mCG48756 [Mus musculus]
gi|149022302|gb|EDL79196.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022303|gb|EDL79197.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022304|gb|EDL79198.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022305|gb|EDL79199.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|187957410|gb|AAI58039.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|187957412|gb|AAI57920.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
Length = 357
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 111/165 (67%), Gaps = 13/165 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQ 138
YS + VD AM RPH++DGRVVE KRAV RE V+ V K+ +
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQ 183
>gi|291394515|ref|XP_002713754.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 274
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|148695240|gb|EDL27187.1| mCG1305, isoform CRA_a [Mus musculus]
Length = 351
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 111/165 (67%), Gaps = 13/165 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQ 138
YS + VD AM RPH++DGRVVE KRAV RE V+ V K+ +
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQ 183
>gi|397489099|ref|XP_003815574.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Pan paniscus]
gi|426337838|ref|XP_004032902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Gorilla gorilla gorilla]
gi|119631468|gb|EAX11063.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|119631470|gb|EAX11065.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|194375464|dbj|BAG56677.1| unnamed protein product [Homo sapiens]
gi|221046256|dbj|BAH14805.1| unnamed protein product [Homo sapiens]
Length = 356
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 111/165 (67%), Gaps = 13/165 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQ 138
YS + VD AM RPH++DGRVVE KRAV RE V+ V K+ +
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQ 183
>gi|197098694|ref|NP_001125266.1| heterogeneous nuclear ribonucleoprotein A3 [Pongo abelii]
gi|55727504|emb|CAH90507.1| hypothetical protein [Pongo abelii]
Length = 355
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 111/165 (67%), Gaps = 13/165 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQ 138
YS + VD AM RPH++DGRVVE KRAV RE V+ V K+ +
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQ 183
>gi|41053816|ref|NP_956789.1| heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
gi|33416839|gb|AAH55499.1| Zgc:66127 [Danio rerio]
Length = 388
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 110/166 (66%), Gaps = 13/166 (7%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
+ E EPE LRKLFIGGL + T D+SL+A FEQWG + D VVM+DP TKRSRGFGF+
Sbjct: 2 SKEQQTPREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGFV 61
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ-- 138
TYS VD AM RPH++DGR VE KRAV RE VK V ++ ++
Sbjct: 62 TYSSVGEVDAAMDARPHKVDGRAVEPKRAVSREDSSKPGAHSTVKKMFVGGIKEDTDEEH 121
Query: 139 -MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+YFGQ+G I+ VN++T K + +RGFAFI FDD+D VD+IV+ K
Sbjct: 122 LREYFGQFGKIDEVNIMTEKNSDKRRGFAFITFDDHDAVDRIVIQK 167
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 25 AMIINKAMEDSQCSEP---ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVT 81
A+ +A+ S+P +++K+F+GG+ T+++ L+ +F Q+G+I +V +M + +
Sbjct: 84 AVEPKRAVSREDSSKPGAHSTVKKMFVGGIKEDTDEEHLREYFGQFGKIDEVNIMTEKNS 143
Query: 82 KRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ RGF FIT+ + VD + + H ++G E ++A+ RE
Sbjct: 144 DKRRGFAFITFDDHDAVDRIVIQKYHTVNGHNCEVRKALSRE 185
>gi|157834095|pdb|1UP1|A Chain A, Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1
Length = 182
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 7 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 66
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 67 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 126
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 127 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 164
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 76 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 133
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 134 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 182
>gi|1711240|dbj|BAA13161.1| TIS [Mus musculus]
gi|119617170|gb|EAW96764.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_d [Homo
sapiens]
Length = 268
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|348519655|ref|XP_003447345.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Oreochromis niloticus]
Length = 335
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 112/169 (66%), Gaps = 13/169 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
MED EPE LRKLFIGGL + T ++SL+A FEQWG + D VVM+DP +KRSRGFGF+T
Sbjct: 1 MEDRGAKEPEQLRKLFIGGLSFETTEESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ--- 138
YS + VD+AM RPH++DGRVVE KRAV RE VK V ++ E+
Sbjct: 61 YSSVREVDDAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHI 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+YF +YG IE ++++ + TG KRGF F+ FDD+D VDKIV K +
Sbjct: 121 REYFEKYGKIECIDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKFHTI 169
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + ++ +FE++G+I + +M++ T + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYHIREYFEKYGKIECIDIMEERSTGKKRGFCFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
++ + H I+ E ++A+ ++
Sbjct: 162 VAQKFHTINFHNCEVRKALSKQ 183
>gi|291394513|ref|XP_002713753.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|327263824|ref|XP_003216717.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Anolis
carolinensis]
Length = 354
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/158 (55%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL+ FEQWG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|402908388|ref|XP_003916925.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Papio anubis]
gi|402908390|ref|XP_003916926.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Papio anubis]
Length = 351
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|426234977|ref|XP_004011468.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Ovis aries]
Length = 319
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|190360152|sp|P0C7M2.1|RA1L3_HUMAN RecName: Full=Putative heterogeneous nuclear ribonucleoprotein
A1-like 3; Short=hnRNP A1-like 3; AltName: Full=hnRNP
core protein A1-like 3
gi|119621694|gb|EAX01289.1| hCG2020860, isoform CRA_b [Homo sapiens]
gi|119621695|gb|EAX01290.1| hCG2020860, isoform CRA_b [Homo sapiens]
Length = 320
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|348580545|ref|XP_003476039.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Cavia
porcellus]
Length = 355
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 111/165 (67%), Gaps = 13/165 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQ 138
YS + VD AM RPH++DGRVVE KRA+ RE V+ V K+ +
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRVVEPKRAISREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQ 183
>gi|111306451|gb|AAI21134.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|58331869|ref|NP_001011094.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus (Silurana)
tropicalis]
gi|54038494|gb|AAH84487.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus (Silurana)
tropicalis]
Length = 343
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 110/161 (68%), Gaps = 13/161 (8%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
+ EPE LRKLFIGGL + T D+SL+ FEQWG + D VVM+DP +KRSRGFGF+TYS +
Sbjct: 3 KSEEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSST 62
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD--------YF 142
VD AMS RPH++DGRVVE KRAV RE R V K+ + + D YF
Sbjct: 63 DEVDAAMSARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEHHLREYF 122
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
QYG IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 123 EQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQK 163
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 51/82 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD+
Sbjct: 100 TVKKIFVGGIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKI 159
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H ++ E ++A+ ++
Sbjct: 160 VIQKYHTVNNHNCEVRKALSKQ 181
>gi|148671985|gb|EDL03932.1| mCG15678, isoform CRA_c [Mus musculus]
Length = 335
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 24 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 83
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 84 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 143
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 144 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 181
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 93 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 150
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 151 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 199
>gi|148671986|gb|EDL03933.1| mCG15678, isoform CRA_d [Mus musculus]
Length = 326
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 15 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 74
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 75 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 134
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 135 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 172
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 84 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 141
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 142 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 190
>gi|380792669|gb|AFE68210.1| heterogeneous nuclear ribonucleoprotein A1 isoform a, partial
[Macaca mulatta]
Length = 317
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|90075098|dbj|BAE87229.1| unnamed protein product [Macaca fascicularis]
Length = 304
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|363735855|ref|XP_003641619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Gallus gallus]
Length = 386
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 115/169 (68%), Gaps = 16/169 (9%)
Query: 28 INKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGF 87
+NK E EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGF
Sbjct: 28 LNKGHEPK---EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGF 84
Query: 88 GFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD-- 140
GF+TYS + VD AMS RPH++DGRVVE KRAV RE V+ V K+ + + D
Sbjct: 85 GFVTYSCVEEVDAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTE 144
Query: 141 ------YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 145 EYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 193
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 130 TVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 189
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 190 VVQKYHTINGHNCEVKKALSKQ 211
>gi|75517570|gb|AAI03708.1| HNRPA1 protein [Homo sapiens]
Length = 267
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|74204146|dbj|BAE39838.1| unnamed protein product [Mus musculus]
Length = 320
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|449506755|ref|XP_002199353.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Taeniopygia guttata]
Length = 385
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 115/169 (68%), Gaps = 16/169 (9%)
Query: 28 INKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGF 87
+NK E EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGF
Sbjct: 27 LNKGHEPK---EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGF 83
Query: 88 GFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD-- 140
GF+TYS + VD AMS RPH++DGRVVE KRAV RE V+ V K+ + + D
Sbjct: 84 GFVTYSCVEEVDAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTE 143
Query: 141 ------YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 144 EYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 192
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 129 TVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 188
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 189 VVQKYHTINGHNCEVKKALSKQ 210
>gi|403296845|ref|XP_003939304.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Saimiri
boliviensis boliviensis]
Length = 320
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGDIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+G + T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGDIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|291389294|ref|XP_002711081.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Oryctolagus
cuniculus]
Length = 371
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|327284183|ref|XP_003226818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Anolis carolinensis]
Length = 386
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 32 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 91
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQMDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 92 DAAMAARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 151
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 152 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 189
>gi|148671983|gb|EDL03930.1| mCG15678, isoform CRA_a [Mus musculus]
Length = 371
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 7 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 66
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 67 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 126
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 127 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 164
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 76 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 133
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 134 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 182
>gi|403271005|ref|XP_003927441.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|395540858|ref|XP_003772367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Sarcophilus
harrisii]
Length = 372
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|426224337|ref|XP_004006328.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Ovis aries]
Length = 310
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|410896922|ref|XP_003961948.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Takifugu rubripes]
Length = 336
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 115/171 (67%), Gaps = 13/171 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
MED + EPE LRKLFIGGL + T ++SL+A FE+WG + D VVM++P KRSRGFGF+T
Sbjct: 1 MEDRELREPEQLRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPACKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM 139
YS + VDEAM RPH++DGRVVE KRAV RE + V+++ K +Q+
Sbjct: 61 YSCLREVDEAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLSVKKIFVGGIKEDTEEDQI 120
Query: 140 -DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEV 189
DYF +YG IE V+++ + +G KRGF F+ FDD+D VDKIV K + +
Sbjct: 121 RDYFEKYGKIECVDIMEERSSGKKRGFCFVTFDDHDTVDKIVAQKYHTINL 171
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S++K+F+GG+ T +D ++ +FE++G+I V +M++ + + RGF F+T+ + VD+
Sbjct: 102 SVKKIFVGGIKEDTEEDQIRDYFEKYGKIECVDIMEERSSGKKRGFCFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
++ + H I+ E ++A+ ++
Sbjct: 162 VAQKYHTINLHNCEVRKALSKQ 183
>gi|8393547|ref|NP_058944.1| heterogeneous nuclear ribonucleoprotein A1 [Rattus norvegicus]
gi|133255|sp|P04256.3|ROA1_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; Short=HDP; AltName: Full=Single-strand
RNA-binding protein; AltName: Full=hnRNP core protein A1
gi|204580|gb|AAA41314.1| helix destabilizing protein [Rattus norvegicus]
Length = 320
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAV 120
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKAL 181
>gi|14043070|ref|NP_112420.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Homo sapiens]
gi|397472158|ref|XP_003807623.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Pan
paniscus]
gi|288558857|sp|P09651.5|ROA1_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=hnRNP core protein A1
gi|119617168|gb|EAW96762.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|119617174|gb|EAW96768.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|380812310|gb|AFE78029.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Macaca
mulatta]
Length = 372
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|335347347|ref|NP_001229438.1| heterogeneous nuclear ribonucleoprotein A1 [Equus caballus]
gi|410964601|ref|XP_003988842.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Felis catus]
gi|426224339|ref|XP_004006329.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Ovis aries]
gi|74222222|dbj|BAE26919.1| unnamed protein product [Mus musculus]
gi|149031878|gb|EDL86790.1| rCG50547, isoform CRA_b [Rattus norvegicus]
gi|149031880|gb|EDL86792.1| rCG50547, isoform CRA_b [Rattus norvegicus]
Length = 373
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|85060507|ref|NP_001034218.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Mus musculus]
gi|59808855|gb|AAH89340.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|62531241|gb|AAH92395.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|74144667|dbj|BAE27318.1| unnamed protein product [Mus musculus]
gi|74185136|dbj|BAE39169.1| unnamed protein product [Mus musculus]
gi|74219989|dbj|BAE40574.1| unnamed protein product [Mus musculus]
Length = 373
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|17738229|ref|NP_524520.1| ribonuclear protein at 97D, isoform B [Drosophila melanogaster]
gi|62472977|ref|NP_001014671.1| ribonuclear protein at 97D, isoform I [Drosophila melanogaster]
gi|62472987|ref|NP_001014672.1| ribonuclear protein at 97D, isoform H [Drosophila melanogaster]
gi|62472997|ref|NP_001014674.1| ribonuclear protein at 97D, isoform F [Drosophila melanogaster]
gi|400927|sp|Q02926.1|RB97D_DROME RecName: Full=Ribonucleoprotein RB97D
gi|158221|gb|AAA99873.1| ribonucleoprotein [Drosophila melanogaster]
gi|7301511|gb|AAF56633.1| ribonuclear protein at 97D, isoform B [Drosophila melanogaster]
gi|61679405|gb|AAX52999.1| ribonuclear protein at 97D, isoform F [Drosophila melanogaster]
gi|61679406|gb|AAX53000.1| ribonuclear protein at 97D, isoform H [Drosophila melanogaster]
gi|61679407|gb|AAX53001.1| ribonuclear protein at 97D, isoform I [Drosophila melanogaster]
Length = 471
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 112/164 (68%), Gaps = 14/164 (8%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
ED C E E LRKLFIGGL T +++LK F+ QWG++VDVVVM+D TKRSRGFGFITY
Sbjct: 22 EDDIC-ELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITY 80
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ-------M 139
++S MVD A NRPH IDG+ VE KRA+PR + R T + + L+
Sbjct: 81 TKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLR 140
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+YF Q+G + SV ++T+K TG +RGFAF+EFDDYD VDK +L K
Sbjct: 141 EYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 184
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S++KLF+GGL +++ L+ +F Q+G +V V ++ D T + RGF F+ + + VD+A
Sbjct: 121 SVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA 180
Query: 102 MSNRPHEIDGRVVETKRAV 120
+ + H I V+ K+++
Sbjct: 181 ILKKQHAIKYVHVDVKKSI 199
>gi|4504445|ref|NP_002127.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Homo sapiens]
gi|6754220|ref|NP_034577.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Mus musculus]
gi|114052384|ref|NP_001039376.1| heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|116175259|ref|NP_001070686.1| heterogeneous nuclear ribonucleoprotein A1 [Sus scrofa]
gi|148529006|ref|NP_001091892.1| heterogeneous nuclear ribonucleoprotein A1-like 1 [Pan troglodytes]
gi|308193354|ref|NP_001184040.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|73996139|ref|XP_848386.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Canis lupus familiaris]
gi|332864208|ref|XP_003318234.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
gi|354503661|ref|XP_003513899.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Cricetulus
griseus]
gi|402886231|ref|XP_003906538.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Papio
anubis]
gi|410058477|ref|XP_003954396.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Pan troglodytes]
gi|410964599|ref|XP_003988841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Felis catus]
gi|426224335|ref|XP_004006327.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Ovis aries]
gi|1350822|sp|P49312.2|ROA1_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=HDP-1; AltName:
Full=Helix-destabilizing protein; AltName:
Full=Single-strand-binding protein; AltName:
Full=Topoisomerase-inhibitor suppressed; AltName:
Full=hnRNP core protein A1
gi|156637352|sp|A5A6H4.1|ROA1_PANTR RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|172046785|sp|P09867.2|ROA1_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=Unwinding protein 1; Short=UP1;
AltName: Full=hnRNP core protein A1
gi|70819|pir||DDRT helix-destabilizing protein - rat
gi|87651|pir||S04617 heterogeneous ribonuclear particle protein A1 - human
gi|193324|gb|AAA37633.1| RNA binding protein [Mus musculus]
gi|296650|emb|CAA31191.1| hnrnp a1 protein [Homo sapiens]
gi|496898|emb|CAA56072.1| hnRNPcore protein A1 [Homo sapiens]
gi|1711242|dbj|BAA13162.1| TIS [Mus musculus]
gi|12803103|gb|AAH02355.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|12841583|dbj|BAB25267.1| unnamed protein product [Mus musculus]
gi|15082486|gb|AAH12158.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|16307046|gb|AAH09600.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|21707258|gb|AAH33714.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|26353286|dbj|BAC40273.1| unnamed protein product [Mus musculus]
gi|47125420|gb|AAH70315.1| HNRPA1 protein [Homo sapiens]
gi|49257442|gb|AAH73162.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|49522847|gb|AAH74502.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|51490837|emb|CAH18571.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|51873929|gb|AAH80675.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|53236995|gb|AAH83136.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|55930978|gb|AAH52296.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|56971262|gb|AAH88150.1| Hnrpa1 protein [Rattus norvegicus]
gi|67968511|dbj|BAE00617.1| unnamed protein product [Macaca fascicularis]
gi|74180018|dbj|BAE36552.1| unnamed protein product [Mus musculus]
gi|74183107|dbj|BAE22518.1| unnamed protein product [Mus musculus]
gi|74184983|dbj|BAE39104.1| unnamed protein product [Mus musculus]
gi|74189079|dbj|BAE39302.1| unnamed protein product [Mus musculus]
gi|74204144|dbj|BAE39837.1| unnamed protein product [Mus musculus]
gi|74204330|dbj|BAE39920.1| unnamed protein product [Mus musculus]
gi|74204859|dbj|BAE20929.1| unnamed protein product [Mus musculus]
gi|74214152|dbj|BAE40333.1| unnamed protein product [Mus musculus]
gi|74214339|dbj|BAE40409.1| unnamed protein product [Mus musculus]
gi|86823844|gb|AAI05414.1| Heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|115371763|gb|ABI96206.1| ROA1 [Sus scrofa]
gi|119617167|gb|EAW96761.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617175|gb|EAW96769.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617176|gb|EAW96770.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|146741382|dbj|BAF62347.1| heterogeneous nuclear ribonucleoprotein A1, transcript variant 1
[Pan troglodytes verus]
gi|148671984|gb|EDL03931.1| mCG15678, isoform CRA_b [Mus musculus]
gi|149031879|gb|EDL86791.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|149031881|gb|EDL86793.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|158255662|dbj|BAF83802.1| unnamed protein product [Homo sapiens]
gi|208966454|dbj|BAG73241.1| heterogeneous nuclear ribonucleoprotein A1 [synthetic construct]
gi|296487907|tpg|DAA30020.1| TPA: heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|335772612|gb|AEH58124.1| heterogeneous nuclear ribonucleoprotein A-like protein [Equus
caballus]
gi|380812306|gb|AFE78027.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
gi|380812308|gb|AFE78028.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
Length = 320
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|326922673|ref|XP_003207572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Meleagris gallopavo]
Length = 378
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 115/167 (68%), Gaps = 13/167 (7%)
Query: 30 KAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
++ + + EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF
Sbjct: 19 RSSQGHEPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGF 78
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD---- 140
+TYS + VD AMS RPH++DGRVVE KRAV RE V+ V K+ + + D
Sbjct: 79 VTYSCVEEVDAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEY 138
Query: 141 ----YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 139 NLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 185
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 122 TVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 181
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 182 VVQKYHTINGHNCEVKKALSKQ 203
>gi|440900708|gb|ELR51786.1| hypothetical protein M91_06025, partial [Bos grunniens mutus]
Length = 315
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 4 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 64 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 124 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 161
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 73 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 130
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 131 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 179
>gi|426223452|ref|XP_004005889.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ +E
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKE 184
>gi|355766014|gb|EHH62484.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
fascicularis]
Length = 372
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|109131409|ref|XP_001082949.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Macaca mulatta]
gi|297304279|ref|XP_001082690.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Macaca mulatta]
Length = 320
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHPVNGHNCEVRKALSKQ 184
>gi|74220381|dbj|BAE31416.1| unnamed protein product [Mus musculus]
Length = 320
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|355564301|gb|EHH20801.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
mulatta]
Length = 372
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|74141832|dbj|BAE40987.1| unnamed protein product [Mus musculus]
Length = 320
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GEIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+GEI +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGEIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|38328245|gb|AAH62235.1| Hnrpa1 protein [Rattus norvegicus]
Length = 313
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|24650422|ref|NP_733172.1| ribonuclear protein at 97D, isoform A [Drosophila melanogaster]
gi|62472991|ref|NP_001014673.1| ribonuclear protein at 97D, isoform G [Drosophila melanogaster]
gi|62473028|ref|NP_001014677.1| ribonuclear protein at 97D, isoform C [Drosophila melanogaster]
gi|158222|gb|AAA99872.1| ribonucleoprotein [Drosophila melanogaster]
gi|23172392|gb|AAN14092.1| ribonuclear protein at 97D, isoform A [Drosophila melanogaster]
gi|61679403|gb|AAX52997.1| ribonuclear protein at 97D, isoform C [Drosophila melanogaster]
gi|61679404|gb|AAX52998.1| ribonuclear protein at 97D, isoform G [Drosophila melanogaster]
Length = 465
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 112/164 (68%), Gaps = 14/164 (8%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
ED C E E LRKLFIGGL T +++LK F+ QWG++VDVVVM+D TKRSRGFGFITY
Sbjct: 22 EDDIC-ELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITY 80
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ-------M 139
++S MVD A NRPH IDG+ VE KRA+PR + R T + + L+
Sbjct: 81 TKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLR 140
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+YF Q+G + SV ++T+K TG +RGFAF+EFDDYD VDK +L K
Sbjct: 141 EYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 184
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S++KLF+GGL +++ L+ +F Q+G +V V ++ D T + RGF F+ + + VD+A
Sbjct: 121 SVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA 180
Query: 102 MSNRPHEIDGRVVETKRAV 120
+ + H I V+ K+++
Sbjct: 181 ILKKQHAIKYVHVDVKKSI 199
>gi|119617171|gb|EAW96765.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_e [Homo
sapiens]
Length = 317
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|291401097|ref|XP_002716928.1| PREDICTED: mCG1035404-like isoform 2 [Oryctolagus cuniculus]
Length = 355
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 110/165 (66%), Gaps = 13/165 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQ 138
YS + VD AM RPH++DGR VE KRAV RE V+ V K+ +
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRAVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHSCEVKKALSKQ 183
>gi|395540406|ref|XP_003772146.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Sarcophilus harrisii]
Length = 385
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 116/178 (65%), Gaps = 18/178 (10%)
Query: 19 GTVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKD 78
G+ P + + D Q E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+D
Sbjct: 14 GSTNPFNLYL-----DGQRREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRD 68
Query: 79 PVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRR 128
P +KRSRGFGF+T+S VD AMS RPH IDGRVVE KRAV RE VK
Sbjct: 69 PASKRSRGFGFVTFSSMAEVDAAMSARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLF 128
Query: 129 VTKVQIALEQ---MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
V ++ E+ DYF +YG I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 129 VGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 186
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 123 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 182
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 183 VLQKYHTINGHNTEVRKALSRQ 204
>gi|395519835|ref|XP_003764047.1| PREDICTED: uncharacterized protein LOC100918877 [Sarcophilus
harrisii]
Length = 495
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 144 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 203
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 204 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 263
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 264 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 301
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 238 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 297
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 298 VVQKYHTINGHNCEVKKALSKQ 319
>gi|410036104|ref|XP_525973.4| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Pan
troglodytes]
Length = 371
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 57 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 116
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 117 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 176
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 177 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 214
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 151 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 210
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 211 VVQKYHTINGHNCEVKKALSKQ 232
>gi|354472305|ref|XP_003498380.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Cricetulus griseus]
Length = 423
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 74 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 133
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-------------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ + + DYF +Y
Sbjct: 134 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 193
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 194 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 231
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 168 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 227
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 228 VVQKYHTINGHNCEVKKALSKQ 249
>gi|426341487|ref|XP_004036066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Gorilla gorilla gorilla]
Length = 320
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 111/158 (70%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++++G KRGFAF+ FDD+D +DKIV+ K
Sbjct: 129 GKIEVIEIMTDRDSGKKRGFAFVTFDDHDSLDKIVIQK 166
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + +D+ + + H + G E ++A+ ++
Sbjct: 136 IMTDRDSGKKRGFAFVTFDDHDSLDKIVIQKYHTVKGHNCEVRKALSKQ 184
>gi|440901911|gb|ELR52772.1| Heterogeneous nuclear ribonucleoprotein A3, partial [Bos grunniens
mutus]
Length = 182
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 1 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 60
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 61 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 120
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 158
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 95 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 154
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 155 VVQKYHTINGHNCEVKKALSKQ 176
>gi|194388148|dbj|BAG65458.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 110/165 (66%), Gaps = 13/165 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFAT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQ 138
YS + VD AM RPH++DGRVVE KRAV RE V+ V K+ +
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQ 183
>gi|62473005|ref|NP_001014675.1| ribonuclear protein at 97D, isoform E [Drosophila melanogaster]
gi|62473015|ref|NP_001014676.1| ribonuclear protein at 97D, isoform D [Drosophila melanogaster]
gi|25009807|gb|AAN71075.1| AT15526p [Drosophila melanogaster]
gi|61679408|gb|AAX53002.1| ribonuclear protein at 97D, isoform D [Drosophila melanogaster]
gi|61679409|gb|AAX53003.1| ribonuclear protein at 97D, isoform E [Drosophila melanogaster]
Length = 434
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 112/164 (68%), Gaps = 14/164 (8%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
ED C E E LRKLFIGGL T +++LK F+ QWG++VDVVVM+D TKRSRGFGFITY
Sbjct: 22 EDDIC-ELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITY 80
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ-------M 139
++S MVD A NRPH IDG+ VE KRA+PR + R T + + L+
Sbjct: 81 TKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLR 140
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+YF Q+G + SV ++T+K TG +RGFAF+EFDDYD VDK +L K
Sbjct: 141 EYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 184
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S++KLF+GGL +++ L+ +F Q+G +V V ++ D T + RGF F+ + + VD+A
Sbjct: 121 SVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA 180
Query: 102 MSNRPHEIDGRVVETKRAV 120
+ + H I V+ K+++
Sbjct: 181 ILKKQHAIKYVHVDVKKSI 199
>gi|449266230|gb|EMC77309.1| Heterogeneous nuclear ribonucleoprotein A3 like protein 2, partial
[Columba livia]
Length = 356
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 112/161 (69%), Gaps = 13/161 (8%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
+ EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS
Sbjct: 3 EPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCV 62
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD--------YF 142
+ VD AMS RPH++DGRVVE KRAV RE V+ V K+ + + D YF
Sbjct: 63 EEVDAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYF 122
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 123 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 163
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 100 TVKKIFVGGIKEDTEEYNLREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 159
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 160 VVQKYHTINGHNCEVKKALSKQ 181
>gi|426372865|ref|XP_004053334.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Gorilla gorilla gorilla]
Length = 306
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 85/155 (54%), Positives = 108/155 (69%), Gaps = 13/155 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 134 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 193
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 194 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 253
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV
Sbjct: 254 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 288
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 203 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 260
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
+M D + + RGF F+T+ + VD+ +S
Sbjct: 261 IMTDRGSGKKRGFAFVTFDDHDSVDKIVSK 290
>gi|432933127|ref|XP_004081818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Oryzias latipes]
Length = 340
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 112/169 (66%), Gaps = 13/169 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+ EPE LRKLFIGGL + T ++SL+A FEQWG + D VVM+DP +KRSRGFGF+T
Sbjct: 1 MENRDAKEPEQLRKLFIGGLSFETTEESLRAHFEQWGSLTDCVVMRDPNSKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ--- 138
YS VD+AM RPH++DGRVVE KRAV RE VK V ++ E+
Sbjct: 61 YSNVTEVDDAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHI 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+YF +YG IE ++++ + TG KRGF F+ FDD+D VDKIV K ++
Sbjct: 121 REYFEKYGKIECIDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHII 169
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + ++ +FE++G+I + +M++ T + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYHIREYFEKYGKIECIDIMEERSTGKKRGFCFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
++ + H I+ E ++A+ ++
Sbjct: 162 VAQKYHIINFHNCEVRKALSKQ 183
>gi|148673673|gb|EDL05620.1| mCG50656 [Mus musculus]
Length = 271
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQ 205
>gi|291415465|ref|XP_002723972.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 112/158 (70%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG ++D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR---RVTKVQIALEQM----------DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R +T +I + M D+F QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G +RGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQK 166
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|355565001|gb|EHH21490.1| hypothetical protein EGK_04572, partial [Macaca mulatta]
Length = 357
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHNCEVKKAISKQ 183
>gi|112421201|ref|NP_001036248.1| heterogeneous nuclear ribonucleoprotein A1 [Macaca mulatta]
gi|2500575|sp|Q28521.3|ROA1_MACMU RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|1332379|gb|AAB01436.1| hnRNP A1-gamma isoform [Macaca mulatta]
Length = 320
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD++ VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQK 166
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHNSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|126347016|ref|XP_001368514.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like, partial
[Monodelphis domestica]
Length = 356
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 6 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 65
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 66 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 125
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 126 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 163
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 100 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 159
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 160 VVQKYHTINGHNCEVKKALSKQ 181
>gi|94482834|gb|ABF22450.1| heterogeneous nuclear ribonucleoprotein A1 [Takifugu rubripes]
Length = 255
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL+A FEQWG + D VVM+DP +KRSRGFGF+TYS V
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVDEV 67
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA----------LEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V + E+ DYF ++
Sbjct: 68 DLAMTARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERF 127
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE ++++T++ +G KRGFAF+ FDD+D VD+IV+ K
Sbjct: 128 GKIEIIDIITDRNSGKKRGFAFVTFDDHDPVDRIVIQK 165
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 50/82 (60%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + ++ +FE++G+I + ++ D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEESHIRDYFERFGKIEIIDIITDRNSGKKRGFAFVTFDDHDPVDRI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+ E ++A+ R+
Sbjct: 162 VIQKYHTINSHNCEVRKALTRQ 183
>gi|383416553|gb|AFH31490.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 272
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQ 205
>gi|148237229|ref|NP_001080689.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus laevis]
gi|28374304|gb|AAH45260.1| Hnrpa1 protein [Xenopus laevis]
Length = 399
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL+ FEQWG + D VVM+DP +KRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLREHFEQWGALTDCVVMRDPNSKRSRGFGFVTYSSTDEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIALEQMD--------YFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V K+ + + D YF QY
Sbjct: 69 DAAMTARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEHHLREYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQK 166
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 51/82 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD+
Sbjct: 103 TVKKIFVGGIKEDTEEHHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKI 162
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H ++ E ++A+ ++
Sbjct: 163 VIQKYHTVNNHNCEVRKALSKQ 184
>gi|291402435|ref|XP_002717573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ D+F QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKI++ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQK 166
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHTVNGHNCEVRKALSKQ 184
>gi|351709863|gb|EHB12782.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 392
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 94 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 153
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V ++ E+ DYF +Y
Sbjct: 154 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 213
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 214 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 251
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 79/144 (54%), Gaps = 24/144 (16%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGF F+TYS V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFDFVTYS---CV 86
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD-----YFGQYGTIESVNM 153
+E + E ++R++ ++ E D +F ++GT+ +
Sbjct: 87 EEGHDPKEPE----------------QLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVV 130
Query: 154 VTNKETGAKRGFAFIEFDDYDVVD 177
+ + +T RGF F+ + + VD
Sbjct: 131 MRDPQTKRSRGFGFVTYSCVEEVD 154
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 188 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 247
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 248 VVQKYHTINGHNCEVKKALSKQ 269
>gi|291415463|ref|XP_002723971.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 112/158 (70%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG ++D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR---RVTKVQIALEQM----------DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R +T +I + M D+F QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G +RGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQK 166
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|296190480|ref|XP_002743214.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Callithrix jacchus]
Length = 320
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-------------LEQMDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R + + DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFAGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D +DKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQK 166
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFAGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + +D+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSMDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|355750652|gb|EHH54979.1| hypothetical protein EGM_04098, partial [Macaca fascicularis]
Length = 326
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 8 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 67
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 68 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 127
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 128 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQ 183
>gi|403258685|ref|XP_003921883.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Saimiri
boliviensis boliviensis]
Length = 378
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQ 205
>gi|296220327|ref|XP_002756261.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Callithrix jacchus]
Length = 304
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQ 205
>gi|38328278|gb|AAH62198.1| Hnrpa3 protein [Mus musculus]
Length = 318
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQ 205
>gi|296490667|tpg|DAA32780.1| TPA: mCG1035404-like [Bos taurus]
Length = 380
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V ++ E+ DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQ 205
>gi|291391798|ref|XP_002712349.1| PREDICTED: mCG1035404-like [Oryctolagus cuniculus]
Length = 378
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHSCEVKKALSKQ 205
>gi|289742401|gb|ADD19948.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 469
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 119/176 (67%), Gaps = 19/176 (10%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E LRKLFIGGL T ++SLK F+ QWG++VDVVVM+D +TKRSRGFGFITY++S MVD+
Sbjct: 34 EHLRKLFIGGLASYTTEESLKEFYNQWGKVVDVVVMRDNMTKRSRGFGFITYTKSYMVDK 93
Query: 101 AMSNRPHEIDGRVVETKRAVPR------EVKVRRVTKVQIALEQ--------MDYFGQYG 146
A NRPH IDG+ VE KRA+PR E K V K+ + + +YF ++G
Sbjct: 94 AQENRPHVIDGKTVEAKRALPRPEREASENKNFSVKKLFVGGLKDNHDESCLTEYFSEFG 153
Query: 147 TIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKV-----VVLEVDQEVINGE 197
+ S+ ++T+K TG +RGFAF+EFDDYD VDK +L K VV++V + V N E
Sbjct: 154 KVVSIKILTDKTTGKRRGFAFVEFDDYDAVDKAILRKTHSIKYVVVDVKKSVYNQE 209
>gi|297264391|ref|XP_001096533.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
3 [Macaca mulatta]
Length = 336
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQ 205
>gi|47939618|gb|AAH71945.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQF 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQFGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|402908392|ref|XP_003916927.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Papio anubis]
Length = 343
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 109/157 (69%), Gaps = 13/157 (8%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
PE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + VD
Sbjct: 2 PEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVD 61
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQYG 146
AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QYG
Sbjct: 62 AAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYG 121
Query: 147 TIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 122 KIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 158
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 70 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 127
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 128 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 176
>gi|74004684|ref|XP_543761.2| PREDICTED: uncharacterized protein LOC608074 isoform 2 [Canis lupus
familiaris]
gi|410968904|ref|XP_003990939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Felis catus]
Length = 378
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQ 205
>gi|74228812|dbj|BAE21894.1| unnamed protein product [Mus musculus]
Length = 379
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQ 205
>gi|34740329|ref|NP_919223.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|397489097|ref|XP_003815573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Pan paniscus]
gi|426337836|ref|XP_004032901.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Gorilla gorilla gorilla]
gi|51338779|sp|P51991.2|ROA3_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|34327775|gb|AAQ63629.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|62822160|gb|AAY14709.1| unknown [Homo sapiens]
gi|85567495|gb|AAI12028.1| Heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|109730489|gb|AAI13471.1| HNRPA3 protein [Homo sapiens]
gi|119631469|gb|EAX11064.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|119631471|gb|EAX11066.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|410261478|gb|JAA18705.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261480|gb|JAA18706.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261482|gb|JAA18707.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261484|gb|JAA18708.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261486|gb|JAA18709.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261488|gb|JAA18710.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261490|gb|JAA18711.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261492|gb|JAA18712.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261494|gb|JAA18713.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351651|gb|JAA42429.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351653|gb|JAA42430.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
Length = 378
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQ 205
>gi|402888739|ref|XP_003907708.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Papio
anubis]
Length = 378
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQ 205
>gi|332209432|ref|XP_003253815.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 378
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQ 205
>gi|329664164|ref|NP_001192358.1| heterogeneous nuclear ribonucleoprotein A3 [Bos taurus]
gi|426220819|ref|XP_004004609.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Ovis aries]
Length = 380
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQ 205
>gi|31559916|ref|NP_666242.2| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37674277|ref|NP_932758.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37693507|ref|NP_937765.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|162329577|ref|NP_001104764.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|311272700|ref|XP_003133549.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
1 [Sus scrofa]
gi|30316201|sp|Q8BG05.1|ROA3_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|51316556|sp|Q6URK4.1|ROA3_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|23274033|gb|AAH23908.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|23468331|gb|AAH38364.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|34327777|gb|AAQ63630.1| heterogeneous nuclear ribonucleoprotein A3 variant a [Rattus
norvegicus]
gi|40787633|gb|AAH64824.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|51980308|gb|AAH81878.1| Heterogeneous nuclear ribonucleoprotein A3 [Rattus norvegicus]
gi|58801248|dbj|BAD89508.1| heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|74143970|dbj|BAE41285.1| unnamed protein product [Mus musculus]
gi|148695241|gb|EDL27188.1| mCG1305, isoform CRA_b [Mus musculus]
gi|149022310|gb|EDL79204.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022311|gb|EDL79205.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022312|gb|EDL79206.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022313|gb|EDL79207.1| rCG27231, isoform CRA_c [Rattus norvegicus]
Length = 379
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQ 205
>gi|114577985|ref|XP_001144332.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
Length = 320
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLF GGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFFGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|58761496|ref|NP_001011724.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
gi|58761498|ref|NP_001011725.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
gi|190356061|sp|Q32P51.2|RA1L2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1-like 2;
Short=hnRNP A1-like 2; AltName: Full=hnRNP core protein
A1-like 2
gi|119572426|gb|EAW52041.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b
[Homo sapiens]
gi|119572427|gb|EAW52042.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b
[Homo sapiens]
Length = 320
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ PH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H + G E ++A+P++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRKALPKQ 184
>gi|291389275|ref|XP_002711073.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KR FAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRSFAFVTFDDHDSVDKIVIQK 166
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + R F F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRSFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|387539574|gb|AFJ70414.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 378
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V ++ E+ DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQ 205
>gi|119572425|gb|EAW52040.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_a
[Homo sapiens]
Length = 309
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ PH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H + G E ++A+P++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRKALPKQ 184
>gi|291415461|ref|XP_002723970.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 112/158 (70%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG ++D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR---RVTKVQIALEQM----------DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R +T +I + M D+F QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G +RGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQK 166
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|291402433|ref|XP_002717572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ D+F QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKI++ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQK 166
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHTVNGHNCEVRKALSKQ 184
>gi|148230657|ref|NP_001081318.1| heterogeneous nuclear ribonucleoprotein A3 homolog 1 [Xenopus
laevis]
gi|1710625|sp|P51968.1|RO31_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A3 homolog 1;
AltName: Full=hnRNP A3(A)
gi|214745|gb|AAA49949.1| ribonucleoprotein [Xenopus laevis]
Length = 373
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 110/162 (67%), Gaps = 13/162 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FEQWG++ D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 22 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D +MS RPH++DGRVVE KRAV RE R V ++ E+ DY Y
Sbjct: 82 DASMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYSESY 141
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K +
Sbjct: 142 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTI 183
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 51/82 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + L+ + E +G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 116 TVKKIFVGGIKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 175
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 176 VVQKYHTINGHNCEVKKALSKQ 197
>gi|440905636|gb|ELR55990.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Bos grunniens
mutus]
Length = 180
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ +
Sbjct: 1 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEG 60
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 61 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 120
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 158
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 70 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 127
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 128 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 176
>gi|80477437|gb|AAI08267.1| Heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
Length = 320
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ PH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H + G E ++A+P++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRKALPKQ 184
>gi|213511640|ref|NP_001134235.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|209731708|gb|ACI66723.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|303664010|gb|ADM16122.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
Length = 228
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 105/169 (62%), Gaps = 13/169 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
M EPE LRKLFIGGL + T D+SL+ FEQWG + D VVM+DP KRSRGFGF T
Sbjct: 1 MSKEAPREPEQLRKLFIGGLSFETTDESLREHFEQWGSLTDCVVMRDPANKRSRGFGFAT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-------------LEQ 138
YS VD AM RPH++DGR+VE KRAV RE R V +
Sbjct: 61 YSGVNEVDAAMEARPHKVDGRLVEPKRAVSREDSSRPGAHVTVKKIFVGGIKEDTEDSHL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
DYF Q+G IE ++++T++ +G KRGFAF+ FDD+D VD+IV+ K L
Sbjct: 121 RDYFEQFGKIEVIDIMTDRTSGKKRGFAFVTFDDHDAVDRIVIQKYHTL 169
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 51/82 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T D L+ +FEQ+G+I + +M D + + RGF F+T+ + VD
Sbjct: 102 TVKKIFVGGIKEDTEDSHLRDYFEQFGKIEVIDIMTDRTSGKKRGFAFVTFDDHDAVDRI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H ++G E ++A+ R+
Sbjct: 162 VIQKYHTLNGHNCEVRKALSRQ 183
>gi|291402431|ref|XP_002717571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ D+F QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKI++ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQK 166
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHTVNGHNCEVRKALSKQ 184
>gi|403283527|ref|XP_003933170.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Saimiri boliviensis boliviensis]
Length = 299
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 113/166 (68%), Gaps = 14/166 (8%)
Query: 32 MEDSQCS-EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
M S+ S EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGFI
Sbjct: 1 MSKSESSKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFI 60
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR---RVTKVQIALEQM-------- 139
Y+ ++ VD AM+ RPH++ GRVVE KRAV RE R +T +I L +
Sbjct: 61 RYATAEEVDAAMNARPHKVHGRVVEPKRAVSREDSQRPGAHLTVKKIFLGGIKEDTEEHH 120
Query: 140 --DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF QYG IE + ++T++ +G KRGFAF+ FDD+D VD IV+ K
Sbjct: 121 LRDYFEQYGKIEVIEIITDRGSGKKRGFAFVAFDDHDSVDMIVIQK 166
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVHGRVVEPKRAVSR--EDSQRPGAHLTVKKIFLGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
++ D + + RGF F+ + + VD + + H ++G E ++A+ ++
Sbjct: 136 IITDRGSGKKRGFAFVAFDDHDSVDMIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|390464176|ref|XP_003733182.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Callithrix jacchus]
Length = 320
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFDTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|113673508|ref|NP_001038904.1| heterogeneous nuclear ribonucleoprotein A3 [Danio rerio]
gi|112418968|gb|AAI22384.1| Heterogeneous nuclear ribonucleoprotein A3 [Danio rerio]
Length = 234
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 108/162 (66%), Gaps = 13/162 (8%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T +DSL+A FEQWG++ D VVM+DP KRSRGFGF+T
Sbjct: 1 MESRDSKEPEQLRKLFIGGLSFETTEDSLRAHFEQWGKLTDCVVMRDPANKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ--- 138
YS VD AM+ RPH++DGRVVE KRAV RE VK V ++ E+
Sbjct: 61 YSSVSEVDAAMTARPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHI 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF YG IE+++++ + TG KRGF F+ FDD+D VDKIV
Sbjct: 121 REYFECYGKIETIDIMEERSTGKKRGFCFVTFDDHDTVDKIV 162
>gi|187956922|gb|AAI58075.1| EG627828 protein [Mus musculus]
gi|187956950|gb|AAI57905.1| EG627828 protein [Mus musculus]
gi|219521461|gb|AAI72011.1| EG627828 protein [Mus musculus]
Length = 351
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 112/165 (67%), Gaps = 13/165 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM-- 139
YS + VD AM RP+++DGRVVE KRAV RE V+ V ++ E+
Sbjct: 61 YSCVEEVDAAMCARPYKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 120
Query: 140 -DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQ 183
>gi|426341485|ref|XP_004036065.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Gorilla gorilla gorilla]
Length = 320
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDK V+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQK 166
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRKALSKQ 184
>gi|119617172|gb|EAW96766.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_f [Homo
sapiens]
Length = 208
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 108/154 (70%), Gaps = 13/154 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE VK V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
G IE + ++T++ +G KRGFAF+ FDD+D VDKI
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
>gi|410899428|ref|XP_003963199.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Takifugu rubripes]
Length = 291
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL+A FEQWG + D VVM+DP +KRSRGFGF+TYS V
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVDEV 67
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA----------LEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V + E+ DYF ++
Sbjct: 68 DLAMTARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERF 127
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE ++++T++ +G KRGFAF+ FDD+D VD+IV+ K
Sbjct: 128 GKIEIIDIITDRNSGKKRGFAFVTFDDHDPVDRIVIQK 165
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 22 VPLAMIINKAMEDSQCSEPE---------------SLRKLFIGGLDYRTNDDSLKAFFEQ 66
V LAM D + EP+ +++K+F+GG+ T + ++ +FE+
Sbjct: 67 VDLAMTARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFER 126
Query: 67 WGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+G+I + ++ D + + RGF F+T+ + VD + + H I+ E ++A+ R+
Sbjct: 127 FGKIEIIDIITDRNSGKKRGFAFVTFDDHDPVDRIVIQKYHTINSHNCEVRKALTRQ 183
>gi|344284648|ref|XP_003414077.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Loxodonta africana]
Length = 372
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD--------YFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V K+ + + D YF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRHYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGF F+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDQGSGKKRGFVFVTFDDHDSVDKIVIQK 166
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRHYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++ + ++
Sbjct: 136 IMTDQGSGKKRGFVFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKVLSKQ 184
>gi|291389273|ref|XP_002711072.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KR FAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRSFAFVTFDDHDSVDKIVIQK 166
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + R F F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRSFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|444520816|gb|ELV13038.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 205
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGF F+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|291401095|ref|XP_002716927.1| PREDICTED: mCG1035404-like isoform 1 [Oryctolagus cuniculus]
Length = 377
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGR VE KRAV RE V+ V K+ + DYF +Y
Sbjct: 90 DAAMCARPHKVDGRAVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHSCEVKKALSKQ 205
>gi|312083050|ref|XP_003143699.1| heterogeneous ribonuclear particle protein [Loa loa]
Length = 349
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 115/175 (65%), Gaps = 19/175 (10%)
Query: 24 LAMIINKAMEDSQCS--EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVT 81
LA++I+ A +D+ EPE RK+FIGGL T D++LK F+ +WG +VD VVM+DP T
Sbjct: 4 LAVVISTAGKDAAGGNLEPEQYRKMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPAT 63
Query: 82 KRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM-- 139
KRSRGFGF+++S+ VD AM+NRPH IDG+ V+ KRAVPRE R ++ I+ +++
Sbjct: 64 KRSRGFGFVSFSKQSEVDAAMANRPHIIDGKTVDPKRAVPREQSQR--SEANISSKRLYV 121
Query: 140 -------------DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
++FG+YG I ++ +K TG RGFAFI FDDYD VDK VL
Sbjct: 122 SGVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVL 176
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 33 EDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
E SQ SE S ++L++ G+ +D K F ++G I+ ++ D T + RGF FIT
Sbjct: 105 EQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFIT 164
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ + VD+ + + H I+ + K+A+ +E
Sbjct: 165 FDDYDAVDKCVLIKSHMINNYRCDVKKALSKE 196
>gi|36102|emb|CAA29922.1| unnamed protein product [Homo sapiens]
Length = 320
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF Q+
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQF 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G K+GFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKKGFAFVTFDDHDSVDKIVIQK 166
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQFGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + +GF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKKGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|148666221|gb|EDK98637.1| mCG119114, isoform CRA_a [Mus musculus]
Length = 357
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 113/167 (67%), Gaps = 13/167 (7%)
Query: 30 KAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
+A E + E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF
Sbjct: 51 EATESAMEREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGF 110
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ- 138
+T+S VD AM+ RPH IDGRVVE KRAV RE VK V ++ E+
Sbjct: 111 VTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEH 170
Query: 139 --MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 171 HLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 217
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 154 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 213
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 214 VLQKYHTINGHNAEVRKALSRQ 235
>gi|148707568|gb|EDL39515.1| mCG1047313 [Mus musculus]
Length = 316
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 110/165 (66%), Gaps = 13/165 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQ 138
YS + V A+ RPH++DGRVVE KRAV RE V+ V K+ +
Sbjct: 61 YSCVEEVAAALCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQ 183
>gi|426241336|ref|XP_004014547.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKGSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|291410921|ref|XP_002721736.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LR+LFIGGL + T ++SL++ FEQWG + D +VM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRRLFIGGLSFETTNESLRSHFEQWGTLTDCMVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|47218115|emb|CAG09987.1| unnamed protein product [Tetraodon nigroviridis]
Length = 419
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T ++SL+A FE+WG + D VVM++P KRSRGFGF+TYS + V
Sbjct: 2 EPEQLRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPSCKRSRGFGFVTYSSLREV 61
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQY 145
DEAM RPH++DGRVVE KRAV RE + V+++ K +Q+ DYF +Y
Sbjct: 62 DEAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYFEKY 121
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE V+++ + TG KRGF F+ FDD+D VDKIV K
Sbjct: 122 GKIECVDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQK 159
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S++K+F+GG+ T +D ++ +FE++G+I V +M++ T + RGF F+T+ + VD+
Sbjct: 96 SVKKIFVGGIKEDTEEDQIRDYFEKYGKIECVDIMEERSTGKKRGFCFVTFDDHDTVDKI 155
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
++ + H I+ E ++A+ ++
Sbjct: 156 VAQKYHTINSHNCEVRKALSKQ 177
>gi|148682805|gb|EDL14752.1| mCG117968 [Mus musculus]
Length = 317
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + + VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 6 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTNCVVMRDPNTKRSRGFGFVTYATVEEV 65
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KR V RE R V ++ E+ DYF QY
Sbjct: 66 DAAMNARPHKVDGRVVEPKRTVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 125
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 126 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 163
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 75 KVDGRVVEPKRTVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 132
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 133 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 181
>gi|402867876|ref|XP_003898055.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 320
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D++L++ FEQWG + D VVM+DP TKRSRGFGF+TY+ V
Sbjct: 9 EPEQLRKLFIGGLSFETTDETLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVGEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDK V+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQK 166
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRKALSKQ 184
>gi|358415649|ref|XP_003583166.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 321
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRV E KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DVAMNARPHKVDGRVGELKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G V L +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVGELKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|29125866|emb|CAD67787.1| hn ribonucleoprotein A2 [Tetraodon nigroviridis]
Length = 191
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL+A FEQWG + D VVM+DP +KRSRGFGF+TYS V
Sbjct: 4 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPSSKRSRGFGFVTYSSVDEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA----------LEQ---MDYFGQY 145
D AM RPH++DGRVVE KRAV RE R V + E+ DYF ++
Sbjct: 64 DLAMGARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERF 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE ++++ ++ +G KRGFAF+ FDD+D VD+IV+ K
Sbjct: 124 GKIEIIDIIADRNSGKKRGFAFVTFDDHDPVDRIVIQK 161
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 50/82 (60%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + ++ +FE++G+I + ++ D + + RGF F+T+ + VD
Sbjct: 98 TVKKIFVGGIKEDTEESHIRDYFERFGKIEIIDIIADRNSGKKRGFAFVTFDDHDPVDRI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+ E ++A+ R+
Sbjct: 158 VIQKYHTINSHNCEVRKALTRQ 179
>gi|390465683|ref|XP_003733453.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 320
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E LRKLFIGGL + T D+SL++ FEQWG ++D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 ESEQLRKLFIGGLSFETTDESLRSHFEQWGTLIDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVTEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVTE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|291410919|ref|XP_002721735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LR+LFIGGL + T ++SL++ FEQWG + D +VM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRRLFIGGLSFETTNESLRSHFEQWGTLTDCMVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|296194380|ref|XP_002744925.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
+PE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 KPEWLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R+ V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRQGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE ++T++ +G KR FAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVTEIMTDRGSGKKRSFAFVTFDDHDTVDKIVIQK 166
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRQGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVTE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + R F F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRSFAFVTFDDHDTVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|184185549|gb|ACC68948.1| heterogeneous nuclear ribonucleoprotein A1 (predicted) [Rhinolophus
ferrumequinum]
Length = 299
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ EQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSRSEQWGALTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|359063952|ref|XP_003585907.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 320
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGF F+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHSCEVRKALSKQ 184
>gi|417410136|gb|JAA51545.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 368
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 113/167 (67%), Gaps = 13/167 (7%)
Query: 30 KAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
+A E + E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF
Sbjct: 22 EATESAMEREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGF 81
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ- 138
+T+S VD AM+ RPH IDGRVVE KRAV RE VK V ++ E+
Sbjct: 82 VTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEH 141
Query: 139 --MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 142 HLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 188
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 125 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 184
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 185 VLQKYHTINGHNAEVRKALSRQ 206
>gi|417409751|gb|JAA51367.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 328
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 83/167 (49%), Positives = 113/167 (67%), Gaps = 13/167 (7%)
Query: 30 KAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
+A E + E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF
Sbjct: 22 EATESAMEREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGF 81
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ- 138
+T+S VD AM+ RPH IDGRVVE KRAV RE VK V ++ E+
Sbjct: 82 VTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEH 141
Query: 139 --MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 142 HLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 188
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 125 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 184
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 185 VLQKYHTINGHNAEVRKALSRQ 206
>gi|348570610|ref|XP_003471090.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Cavia
porcellus]
Length = 356
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 110/165 (66%), Gaps = 13/165 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+ P TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDRVVMRVPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQ 138
YS + VD AM RPH++DGRVVE KRAV RE V+ V K+ +
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 165
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 102 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 162 VVQKYHTINGHNCEVKKALSKQ 183
>gi|291384354|ref|XP_002708769.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 274
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFEMTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVLREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 33 EDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
EDSQ +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T
Sbjct: 93 EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVT 152
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ + VD+ + + H ++G E ++A+ ++
Sbjct: 153 FDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|297681162|ref|XP_002818335.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pongo abelii]
Length = 321
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 111/158 (70%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EP+ LRKLFIGGL++ T ++SL++ FEQWG ++D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPKQLRKLFIGGLNFETTNESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRA+ RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAISREDSQRPGAHLTVKKIFVGGIKKDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDK V+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQK 166
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV I++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAISR--EDSQRPGAHLTVKKIFVGGIKKDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G V E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHVCEVRKALSKQ 184
>gi|327274637|ref|XP_003222083.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Anolis carolinensis]
Length = 349
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 111/163 (68%), Gaps = 13/163 (7%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
+S E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 7 ESDWREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 66
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MD 140
VD AM+ RPH IDGRVVE KRAV RE VK V ++ E+ D
Sbjct: 67 SMAEVDSAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 126
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YF +YG I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 127 YFSEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 169
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +F ++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 106 TVKKLFVGGIKEDTEEHHLRDYFSEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 165
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 166 VLQKYHTINGHNAEVRKALSRQ 187
>gi|89269835|emb|CAJ82537.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Xenopus (Silurana)
tropicalis]
Length = 327
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 120/196 (61%), Gaps = 20/196 (10%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T +DSL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D +M+ RPH IDGRVVE KRAV RE VK V ++ E+ +YF +Y
Sbjct: 64 DASMAARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGEDHRTHGTH 205
G IES+ ++T+K++G KRGF F+ FDD+D VDKIVL K ING +
Sbjct: 124 GKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKY-------HTINGHNAEVRKAL 176
Query: 206 QEAKVDGVTTTNQTHG 221
+ ++ V T + G
Sbjct: 177 SKQEMQDVQNTRNSRG 192
>gi|329112537|ref|NP_001016926.2| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 328
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 120/196 (61%), Gaps = 20/196 (10%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T +DSL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D +M+ RPH IDGRVVE KRAV RE VK V ++ E+ +YF +Y
Sbjct: 64 DASMAARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGEDHRTHGTH 205
G IES+ ++T+K++G KRGF F+ FDD+D VDKIVL K ING +
Sbjct: 124 GKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKY-------HTINGHNAEVRKAL 176
Query: 206 QEAKVDGVTTTNQTHG 221
+ ++ V T + G
Sbjct: 177 SKQEMQDVQNTRNSRG 192
>gi|395843943|ref|XP_003794730.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Otolemur garnettii]
Length = 251
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM PH++DGRVVE KRAV RE V+ V K+ + DYF +Y
Sbjct: 90 DAAMCALPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 50/77 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKR 118
+ + H I+G E K+
Sbjct: 184 VVQKYHTINGHNCEVKK 200
>gi|291384352|ref|XP_002708768.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFEMTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVLREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 33 EDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
EDSQ +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T
Sbjct: 93 EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVT 152
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ + VD+ + + H ++G E ++A+ ++
Sbjct: 153 FDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|344268345|ref|XP_003406021.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Loxodonta africana]
Length = 348
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 108/155 (69%), Gaps = 13/155 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 90 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 149
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V ++ E+ DYF +Y
Sbjct: 150 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 209
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV
Sbjct: 210 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 244
>gi|329112539|ref|NP_001192271.1| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 350
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 120/196 (61%), Gaps = 20/196 (10%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T +DSL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D +M+ RPH IDGRVVE KRAV RE VK V ++ E+ +YF +Y
Sbjct: 64 DASMAARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGEDHRTHGTH 205
G IES+ ++T+K++G KRGF F+ FDD+D VDKIVL K ING +
Sbjct: 124 GKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKY-------HTINGHNAEVRKAL 176
Query: 206 QEAKVDGVTTTNQTHG 221
+ ++ V T + G
Sbjct: 177 SKQEMQDVQNTRNSRG 192
>gi|134024345|gb|AAI35351.1| hnrpa2b1 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 120/196 (61%), Gaps = 20/196 (10%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T +DSL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D +M+ RPH IDGRVVE KRAV RE VK V ++ E+ +YF +Y
Sbjct: 64 DASMAARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGEDHRTHGTH 205
G IES+ ++T+K++G KRGF F+ FDD+D VDKIVL K ING +
Sbjct: 124 GKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKY-------HTINGHNAEVRKAL 176
Query: 206 QEAKVDGVTTTNQTHG 221
+ ++ V T + G
Sbjct: 177 SKQEMQDVQNTRNSRG 192
>gi|75074832|sp|Q9TTV2.1|ROA2_SAGOE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1; AltName: Full=Vitamin D response
element-binding protein 2; Short=VDRE-BP 2
gi|6273351|gb|AAF06330.1|AF192348_1 vitamin D response element binding protein [Saguinus oedipus]
Length = 341
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL ++T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFAEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +F ++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFAEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQ 179
>gi|31455238|gb|AAH00506.3| HNRNPA2B1 protein [Homo sapiens]
Length = 249
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQ 179
>gi|133258|sp|P17130.1|ROA1_XENLA RecName: Full=Heterogeneous nuclear ribonucleoproteins A1 homolog;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|214239|gb|AAA49741.1| ribonucleoprotein A1a [Xenopus laevis]
Length = 365
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 109/159 (68%), Gaps = 13/159 (8%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
+EPE LRKLFIGGL + T D+SL+ FEQWG + D VVM+DP +KRSRGFGF+TY +
Sbjct: 8 NEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDE 67
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD--------YFGQ 144
VD AM+ RPH++DGRVVE KRAV RE R V K+ + + D YF Q
Sbjct: 68 VDAAMTARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQ 127
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YG IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQK 166
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVD 72
+V G VV +++ EDS S P +++K+F+GG+ T +D L+ +FEQ+G+I
Sbjct: 78 KVDGRVVEPKRAVSR--EDS--SRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEV 133
Query: 73 VVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ +M D + + RGF F+T+ + VD+ + + H ++ + ++A+ ++
Sbjct: 134 IEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNSQVRKALSKQ 184
>gi|214241|gb|AAA49742.1| ribonucleoprotein A1b [Xenopus laevis]
Length = 351
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 109/159 (68%), Gaps = 13/159 (8%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
+EPE LRKLFIGGL + T D+SL+ FEQWG + D VVM+DP +KRSRGFGF+TY +
Sbjct: 8 NEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDE 67
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIALEQMD--------YFGQ 144
VD AM+ RPH++DGRVVE KRAV RE R V K+ + + D YF Q
Sbjct: 68 VDAAMTARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQ 127
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YG IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQK 166
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T +D L+ +FEQ+G+I + +M D + + RGF F+T+ + VD+
Sbjct: 103 TVKKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKI 162
Query: 102 MSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMDYFGQYGT 147
+ + H ++ + ++A+ ++ + V + + G YG+
Sbjct: 163 VIQKYHTVNNHNSQVRKALSKQ----EMASVSGSQRERGGSGNYGS 204
>gi|390470311|ref|XP_003734270.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
2 [Callithrix jacchus]
Length = 191
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V ++ E+ DYF Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEHTEEYNLRDYFENY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFAF+ FDD+D VDK+V K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVAFDDHDTVDKLVGKK 187
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 42/66 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE +G+I + VM+D + + RGF F+ + + VD+
Sbjct: 124 TVKKIFVGGIKEHTEEYNLRDYFENYGKIETIEVMEDRQSGKKRGFAFVAFDDHDTVDKL 183
Query: 102 MSNRPH 107
+ + H
Sbjct: 184 VGKKSH 189
>gi|147900728|ref|NP_001081282.1| heterogeneous nuclear ribonucleoproteins A1 homolog [Xenopus
laevis]
gi|47938744|gb|AAH72090.1| LOC397751 protein [Xenopus laevis]
Length = 365
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 109/159 (68%), Gaps = 13/159 (8%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
+EPE LRKLFIGGL + T D+SL+ FEQWG + D VVM+DP +KRSRGFGF+TY +
Sbjct: 8 NEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDE 67
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIALEQMD--------YFGQ 144
VD AM+ RPH++DGRVVE KRAV RE R V K+ + + D YF Q
Sbjct: 68 VDAAMTARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQ 127
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YG IE + ++T++ +G KRGFAF+ F+D+D VDKIV+ K
Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQK 166
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T +D L+ +FEQ+G+I + +M D + + RGF F+T+ + VD+
Sbjct: 103 TVKKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKI 162
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H ++ E ++A+ ++
Sbjct: 163 VIQKYHTVNNHNCEVRKALSKQ 184
>gi|449492608|ref|XP_002192177.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Taeniopygia guttata]
Length = 309
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 114/171 (66%), Gaps = 13/171 (7%)
Query: 30 KAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
+ +S E E RKLFIGGL + T ++SL++++EQWG++ D VVM+DP +KRSRGFGF
Sbjct: 3 RGDRESDWREKEQFRKLFIGGLSFETTEESLRSYYEQWGKLTDCVVMRDPASKRSRGFGF 62
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ- 138
+T+S VD AM+ RPH IDGRVVE KRAV RE VK V ++ E+
Sbjct: 63 VTFSSMAEVDAAMAARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEH 122
Query: 139 --MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
DYF +YG I+++ ++T++++G KRGF F+ FDD+D VDKIVL K +
Sbjct: 123 HLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTI 173
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 106 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 165
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 166 VLQKYHTINGHNAEVRKALSRQ 187
>gi|390470313|ref|XP_002755160.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
1 [Callithrix jacchus]
Length = 186
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 107/155 (69%), Gaps = 13/155 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V ++ E+ DYF Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEHTEEYNLRDYFENY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
G IE++ ++ ++++G KRGFAF+ FDD+D VDK+V
Sbjct: 150 GKIETIEVMEDRQSGKKRGFAFVAFDDHDTVDKLV 184
>gi|47228652|emb|CAG07384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 323
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL+A FEQWG + D VVM+DP +KRSRGFGF+TYS V
Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPSSKRSRGFGFVTYSSVDEV 67
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA----------LEQ---MDYFGQY 145
D AM RPH++DGRVVE KRAV RE R V + E+ DYF ++
Sbjct: 68 DLAMGARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERF 127
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE ++++ ++ +G KRGFAF+ FDD+D VD+IV+ K
Sbjct: 128 GKIEIIDIIADRNSGKKRGFAFVTFDDHDPVDRIVIQK 165
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDS +++K+F+GG+ T + ++ +FE++G+I +
Sbjct: 77 KVDGRVVEPKRAVSR--EDSNRPGAHVTVKKIFVGGIKEDTEESHIRDYFERFGKIEIID 134
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
++ D + + RGF F+T+ + VD + + H I+ E ++A+ R+
Sbjct: 135 IIADRNSGKKRGFAFVTFDDHDPVDRIVIQKYHTINSHNCEVRKALTRQ 183
>gi|296216773|ref|XP_002754712.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+ Y+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVRYAAVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQMDYFGQY 145
D AM+ R H++DGRVVE KRAV RE R V K+ I DYF QY
Sbjct: 69 DAAMNARSHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFIGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEMIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+FIGG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFIGGIKEDTEEHHLRDYFEQYGKIEMIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|405977263|gb|EKC41722.1| Heterogeneous nuclear ribonucleoprotein A2-like protein 1
[Crassostrea gigas]
Length = 363
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 113/181 (62%), Gaps = 18/181 (9%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
D E E RKLFIGGL Y T D +LK++FE+WG I D VVM DP TKRSRGFGFITY
Sbjct: 32 DPDDPEAEQYRKLFIGGLSYETTDSTLKSYFEKWGTITDCVVMTDPQTKRSRGFGFITYE 91
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM-------------- 139
+ M+DE +NRPH+IDGR VETKRA+PRE R ++ Q + E+M
Sbjct: 92 KVAMLDECQANRPHKIDGREVETKRAMPREESGR--SESQKSNEKMFVGGLRDTTTEDDV 149
Query: 140 -DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK-VVVLEVDQEVINGE 197
+ F +YG I+++ ++ +K T RGF F+ FDDYD VDK VL K + + D EV E
Sbjct: 150 REAFQEYGNIKNIELIKDKATNKTRGFCFVTFDDYDPVDKCVLKKRFKICDKDVEVKKAE 209
Query: 198 D 198
+
Sbjct: 210 N 210
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 30 KAMEDSQCSEPESLR---KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+AM + ES + K+F+GGL T +D ++ F+++G I ++ ++KD T ++RG
Sbjct: 116 RAMPREESGRSESQKSNEKMFVGGLRDTTTEDDVREAFQEYGNIKNIELIKDKATNKTRG 175
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRA 119
F F+T+ + VD+ + + +I + VE K+A
Sbjct: 176 FCFVTFDDYDPVDKCVLKKRFKICDKDVEVKKA 208
>gi|291389620|ref|XP_002711397.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ D+F QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|334349111|ref|XP_001368260.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Monodelphis domestica]
Length = 341
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AMS RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMSARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQ 179
>gi|149634029|ref|XP_001510026.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Ornithorhynchus anatinus]
gi|345323587|ref|XP_003430725.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 2 [Ornithorhynchus anatinus]
Length = 344
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AMS RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMSARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQ 179
>gi|94482853|gb|ABF22468.1| heterogeneous nuclear ribonucleoprotein A3 [Takifugu rubripes]
Length = 341
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 111/164 (67%), Gaps = 13/164 (7%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T ++SL+A FE+WG + D VVM++P KRSRGFGF+TYS + V
Sbjct: 13 EPEQLRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPACKRSRGFGFVTYSCLREV 72
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQY 145
DEAM RPH++DGRVVE KRAV RE + V+++ K +Q+ DYF +Y
Sbjct: 73 DEAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYFEKY 132
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEV 189
G IE V+++ + +G KRGF F+ FDD+D VDKIV K + +
Sbjct: 133 GKIECVDIMEERSSGKKRGFCFVTFDDHDTVDKIVAQKYHTINL 176
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S++K+F+GG+ T +D ++ +FE++G+I V +M++ + + RGF F+T+ + VD+
Sbjct: 107 SVKKIFVGGIKEDTEEDQIRDYFEKYGKIECVDIMEERSSGKKRGFCFVTFDDHDTVDKI 166
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
++ + H I+ E ++A+ ++
Sbjct: 167 VAQKYHTINLHNCEVRKALSKQ 188
>gi|148233568|ref|NP_001079471.1| heterogeneous nuclear ribonucleoprotein A2 homolog 2 [Xenopus
laevis]
gi|1710624|sp|P51990.1|RO22_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A2 homolog 2;
AltName: Full=hnRNP A2(B)
gi|214743|gb|AAB59951.1| ribonucleoprotein [Xenopus laevis]
gi|27694622|gb|AAH43750.1| MGC52881 protein [Xenopus laevis]
Length = 358
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ F+EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AMS RPH IDGRVVE KRAV RE VK V ++ E+ +YF +Y
Sbjct: 64 DAAMSARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IES ++T+K++G KRGF F+ F+D+D VDKIVL K
Sbjct: 124 GKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQK 161
>gi|345323589|ref|XP_003430726.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 3 [Ornithorhynchus anatinus]
Length = 302
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AMS RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMSARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQ 179
>gi|444523821|gb|ELV13633.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 304
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 32 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 91
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM---DYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 92 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 151
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 152 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 189
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 47/74 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 126 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 185
Query: 102 MSNRPHEIDGRVVE 115
+ + H I+G E
Sbjct: 186 VLQKYHTINGHNAE 199
>gi|76780030|gb|AAI06633.1| MGC52881 protein [Xenopus laevis]
Length = 346
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ F+EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AMS RPH IDGRVVE KRAV RE VK V ++ E+ +YF +Y
Sbjct: 64 DAAMSARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IES ++T+K++G KRGF F+ F+D+D VDKIVL K
Sbjct: 124 GKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQK 161
>gi|348564390|ref|XP_003467988.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Cavia porcellus]
Length = 383
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 46 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 105
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 106 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 165
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 166 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 203
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 140 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 199
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 200 VLQKYHTINGHNAEVRKALSRQ 221
>gi|402864694|ref|XP_003896588.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Papio
anubis]
Length = 320
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T ++SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTEESLRSHFEQWGTLADCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ D F QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDCFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDCFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|402882999|ref|XP_003905018.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Papio
anubis]
Length = 378
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM RPH++DGRVVE K+AV RE V+ V ++ E+ DYF +Y
Sbjct: 90 DAAMCARPHKVDGRVVEPKKAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G K GFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKTGFAFVTFDDHDTVDKIVVQK 187
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + GF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKTGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 184 VVQKYHTINGHNCEVKKALSKQ 205
>gi|291389618|ref|XP_002711396.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ D+F QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|291389616|ref|XP_002711395.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ D+F QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|403255345|ref|XP_003920400.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 ELEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D +DKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQK 166
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + +D+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSMDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|148227778|ref|NP_001080390.1| heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Xenopus
laevis]
gi|28302301|gb|AAH46692.1| Hnrpa2b1 protein [Xenopus laevis]
Length = 346
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG + D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ +YF +Y
Sbjct: 64 DAAMATRPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+S+ ++T+K++G KRGFAF+ FDD+D VDKIVL K
Sbjct: 124 GKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQK 161
>gi|449268325|gb|EMC79194.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Columba
livia]
Length = 339
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL++++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 2 EKEQFRKLFIGGLSFETTEESLRSYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 61
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 62 DAAMAARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 121
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 122 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 159
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 96 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 155
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 156 VLQKYHTINGHNAEVRKALSRQ 177
>gi|71896753|ref|NP_001026156.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Gallus gallus]
gi|53127438|emb|CAG31102.1| hypothetical protein RCJMB04_2g17 [Gallus gallus]
Length = 349
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 111/163 (68%), Gaps = 13/163 (7%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
+S E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S
Sbjct: 7 ESDWREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFS 66
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MD 140
VD AM+ RPH IDGRVVE KRAV RE VK V ++ E+ D
Sbjct: 67 SMAEVDAAMAARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 126
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YF +YG I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 127 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 169
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 106 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 165
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 166 VLQKYHTINGHNAEVRKALSRQ 187
>gi|403309130|ref|XP_003944981.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 385
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 115/178 (64%), Gaps = 14/178 (7%)
Query: 20 TVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDP 79
++V ++++ + EPE LRKLFIGGL + T D+SL++ FEQW + D VVM+DP
Sbjct: 54 SIVKVSLLPAILSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWRTLTDCVVMRDP 113
Query: 80 VTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI----- 134
TKRSRGFGF+TY+ + VD AM+ RPH++DGRVVE KRAV R R + +
Sbjct: 114 NTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSRGDSRRPGAHLTVKKKIF 173
Query: 135 -------ALEQ--MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
A E DYF QYG IE + ++T++ +G KRGFAF+ FDD+D +DKIV+ K
Sbjct: 174 VGGIKEDAEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQK 231
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 49/80 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ + L+ +FEQ+G+I + +M D + + RGF F+T+ + +D+ +
Sbjct: 170 KKIFVGGIKEDAEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVI 229
Query: 104 NRPHEIDGRVVETKRAVPRE 123
+ H ++G E ++A+ ++
Sbjct: 230 QKYHTVNGHGCEVRKALSKQ 249
>gi|1710623|sp|P51989.1|RO21_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A2 homolog 1;
AltName: Full=hnRNP A2(A)
gi|214741|gb|AAA49948.1| ribonucleoprotein [Xenopus laevis]
Length = 346
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG + D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ +YF +Y
Sbjct: 64 DAAMATRPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+S+ ++T+K++G KRGFAF+ FDD+D VDKIVL K
Sbjct: 124 GKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQK 161
>gi|358334791|dbj|GAA32408.2| heterogeneous nuclear ribonucleoprotein A1/A3 [Clonorchis sinensis]
Length = 340
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 106/156 (67%), Gaps = 13/156 (8%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E RKLFIGGL +T + LK F+ QWGEIVDVVVMKD V+ RSRGFGFITY E +MVD
Sbjct: 14 EQFRKLFIGGLTPQTTETMLKDFYSQWGEIVDVVVMKDSVSHRSRGFGFITYKEPEMVDA 73
Query: 101 AMSNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGT 147
A +NRPHEIDG+ VE KRA+PRE + V+++ K + +++ DYF +YG
Sbjct: 74 AQANRPHEIDGKTVEAKRAMPREDSQTPESHMTVKKLFVGALKKDVTQDELRDYFSKYGN 133
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
I +VT KETG RGF F+ FDDYD VDK +L K
Sbjct: 134 IVDCEIVTWKETGESRGFGFVTFDDYDPVDKAILYK 169
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 33 EDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
EDSQ E +++KLF+G L D L+ +F ++G IVD ++ T SRGFGF+T
Sbjct: 96 EDSQTPESHMTVKKLFVGALKKDVTQDELRDYFSKYGNIVDCEIVTWKETGESRGFGFVT 155
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMDYFGQY 145
+ + VD+A+ +PH I + K+A ++K QI + FG+Y
Sbjct: 156 FDDYDPVDKAILYKPHHIGSSRADVKKA---------LSKEQINETRRKRFGRY 200
>gi|444723112|gb|ELW63776.1| Heterogeneous nuclear ribonucleoprotein A3 [Tupaia chinensis]
Length = 300
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/155 (53%), Positives = 107/155 (69%), Gaps = 13/155 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 31 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 90
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQY 145
D AM RPH++DGRVVE KRAV RE V+ V K+ + DYF ++
Sbjct: 91 DAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKF 150
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
G IE++ ++ ++++G KRGFAF+ FDD+D VDKIV
Sbjct: 151 GKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 185
>gi|197101465|ref|NP_001127331.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Pongo abelii]
gi|75070806|sp|Q5RBU8.1|ROA2_PONAB RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|55728019|emb|CAH90762.1| hypothetical protein [Pongo abelii]
Length = 353
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 113/173 (65%), Gaps = 20/173 (11%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 75
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 76 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 135
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGED 198
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K ING +
Sbjct: 136 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK-------HHTINGHN 181
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 170 VLQKHHTINGHNAEVRKALSRQ 191
>gi|109109574|ref|XP_001086021.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Macaca mulatta]
Length = 267
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFI G+ + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIRGMSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D A++ RPH++DGRVVE KRAV RE VK V ++ E+ DYF QY
Sbjct: 69 DAAINARPHKVDGRVVEPKRAVSREDSQRPGAHFTVKKTFVGSIKEDTEEHHLRDYFDQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDK V+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQK 166
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K F+G + T + L+ +F+Q+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHFTVKKTFVGSIKEDTEEHHLRDYFDQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRKALSKQ 184
>gi|119597384|gb|EAW76978.1| hCG2023776 [Homo sapiens]
Length = 317
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EP+ LRKLFIGGL + T ++SL++ FEQWG ++D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPKQLRKLFIGGLSFETTNESLRSHFEQWGTLMDCVVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQMDYFGQY 145
D AM+ RPH++DGRVVE+KRAV RE R V K+ + DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVESKRAVSREDSQRPGAHLTVKKIFVGGIKEDTKEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVESKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTKEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G + E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHICEVRKALSKQ 184
>gi|355694911|gb|AER99826.1| heteroproteinous nuclear ribonucleoprotein A2/B1 [Mustela putorius
furo]
Length = 173
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 2 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 61
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 62 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 121
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 122 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 159
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 50/78 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 96 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 155
Query: 102 MSNRPHEIDGRVVETKRA 119
+ + H I+G E ++A
Sbjct: 156 VLQKYHTINGHNAEVRKA 173
>gi|3329498|gb|AAC26867.1| heterogenous nuclear ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 110/162 (67%), Gaps = 13/162 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K +
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTI 165
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQ 179
>gi|281349549|gb|EFB25133.1| hypothetical protein PANDA_000670 [Ailuropoda melanoleuca]
Length = 323
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQ 179
>gi|90083957|dbj|BAE90929.1| unnamed protein product [Macaca fascicularis]
Length = 317
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 75
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 76 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 135
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 136 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 173
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 170 VLQKYHTINGHNAEVRKALSRQ 191
>gi|296188846|ref|XP_002742529.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRK FIGGL + T D+SL++ FEQWG + D VVM+D TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKPFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDANTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|354472764|ref|XP_003498607.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Cricetulus griseus]
Length = 357
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 20 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 79
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 80 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 139
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 140 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 177
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 114 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 173
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 174 VLQKYHTINGHNAEVRKALSRQ 195
>gi|158259881|dbj|BAF82118.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 75
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 76 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 135
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 136 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 173
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 170 VLQKYHTINGHNAEVRKALSRQ 191
>gi|32880197|ref|NP_872591.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2 [Mus
musculus]
gi|26354140|dbj|BAC40700.1| unnamed protein product [Mus musculus]
gi|223461557|gb|AAI41254.1| Hnrnpa2b1 protein [Mus musculus]
Length = 301
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 110/162 (67%), Gaps = 13/162 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K +
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTI 165
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQ 179
>gi|297269736|ref|XP_002799946.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Macaca mulatta]
Length = 273
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFI G+ + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIRGMSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D A++ RPH++DGRVVE KRAV RE VK V ++ E+ DYF QY
Sbjct: 69 DAAINARPHKVDGRVVEPKRAVSREDSQRPGAHFTVKKTFVGSIKEDTEEHHLRDYFDQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDK V+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQK 166
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K F+G + T + L+ +F+Q+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHFTVKKTFVGSIKEDTEEHHLRDYFDQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRKALSKQ 184
>gi|296196619|ref|XP_002745917.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Callithrix jacchus]
Length = 341
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQ 179
>gi|332206587|ref|XP_003252377.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Nomascus leucogenys]
Length = 321
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 110/158 (69%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EP+ LRKLFIGGL + T ++SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 10 EPKQLRKLFIGGLSFETTNESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 69
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD--------YFGQY 145
D AM+ RPH++DGRVVE KRA+ RE R V K+ + + D YF QY
Sbjct: 70 DAAMNARPHKVDGRVVEPKRAISREDSQRPDAHLTVKKIFVGGIKEDTEEHHLRGYFEQY 129
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKI++ K
Sbjct: 130 GKIEVIEIMTDQGSGKKRGFAFLTFDDHDSVDKIIIQK 167
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV I++ EDSQ + +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 79 KVDGRVVEPKRAISR--EDSQRPDAHLTVKKIFVGGIKEDTEEHHLRGYFEQYGKIEVIE 136
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G + E ++A+ ++
Sbjct: 137 IMTDQGSGKKRGFAFLTFDDHDSVDKIIIQKYHTVNGHICEVRKALSKQ 185
>gi|440899276|gb|ELR50605.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Bos
grunniens mutus]
Length = 339
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 2 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 61
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 62 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 121
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 122 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 159
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 96 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 155
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 156 VLQKYHTINGHNAEVRKALSRQ 177
>gi|4504447|ref|NP_002128.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform A2 [Homo
sapiens]
gi|114051756|ref|NP_001039440.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Bos taurus]
gi|73976082|ref|XP_863847.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 3
[Canis lupus familiaris]
gi|332242620|ref|XP_003270483.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Nomascus leucogenys]
gi|332864909|ref|XP_003318407.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Pan troglodytes]
gi|338724111|ref|XP_003364873.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Equus caballus]
gi|350595419|ref|XP_003484106.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Sus scrofa]
gi|390466619|ref|XP_003733620.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Callithrix jacchus]
gi|397472888|ref|XP_003807964.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Pan paniscus]
gi|402863875|ref|XP_003896219.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Papio anubis]
gi|403287969|ref|XP_003935191.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Saimiri boliviensis boliviensis]
gi|410952506|ref|XP_003982920.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Felis catus]
gi|426355697|ref|XP_004045246.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Gorilla gorilla gorilla]
gi|122145945|sp|Q2HJ60.1|ROA2_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|337449|gb|AAA36574.1| hnRNP A2 protein [Homo sapiens]
gi|500638|gb|AAB60650.1| hnRNP protein A2 [Homo sapiens]
gi|565644|dbj|BAA06032.1| hnRNP A2 protein [Homo sapiens]
gi|87578315|gb|AAI13299.1| Heterogeneous nuclear ribonucleoprotein A2/B1 [Bos taurus]
gi|119614241|gb|EAW93835.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_b [Homo
sapiens]
gi|119614242|gb|EAW93836.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_b [Homo
sapiens]
gi|149033380|gb|EDL88181.1| rCG52521, isoform CRA_a [Rattus norvegicus]
gi|149033381|gb|EDL88182.1| rCG52521, isoform CRA_a [Rattus norvegicus]
gi|296488431|tpg|DAA30544.1| TPA: heterogeneous nuclear ribonucleoproteins A2/B1 [Bos taurus]
gi|387542842|gb|AFJ72048.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform A2 [Macaca
mulatta]
gi|410225452|gb|JAA09945.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343561|gb|JAA40594.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343565|gb|JAA40596.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343567|gb|JAA40597.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343569|gb|JAA40598.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|456753293|gb|JAA74140.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Sus scrofa]
Length = 341
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQ 179
>gi|109134362|ref|NP_058086.2| heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1 [Mus
musculus]
gi|309267107|ref|XP_001473875.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Mus musculus]
gi|21071091|gb|AAK98601.2| heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus]
gi|148666222|gb|EDK98638.1| mCG119114, isoform CRA_b [Mus musculus]
gi|148666223|gb|EDK98639.1| mCG119114, isoform CRA_b [Mus musculus]
Length = 341
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQ 179
>gi|14043072|ref|NP_112533.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1 [Homo
sapiens]
gi|388452958|ref|NP_001252700.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Macaca mulatta]
gi|73976084|ref|XP_532495.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Canis lupus familiaris]
gi|194209740|ref|XP_001498416.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Equus caballus]
gi|296209404|ref|XP_002751505.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Callithrix jacchus]
gi|301754131|ref|XP_002912905.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Ailuropoda melanoleuca]
gi|332242622|ref|XP_003270484.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Nomascus leucogenys]
gi|332864911|ref|XP_519003.3| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Pan troglodytes]
gi|335305558|ref|XP_003134901.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Sus scrofa]
gi|395830927|ref|XP_003788564.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Otolemur
garnettii]
gi|397472890|ref|XP_003807965.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Pan paniscus]
gi|402863877|ref|XP_003896220.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Papio anubis]
gi|403287971|ref|XP_003935192.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Saimiri boliviensis boliviensis]
gi|410952508|ref|XP_003982921.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Felis catus]
gi|426227786|ref|XP_004007996.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Ovis
aries]
gi|426355699|ref|XP_004045247.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Gorilla gorilla gorilla]
gi|133257|sp|P22626.2|ROA2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|337453|gb|AAA60271.1| hnRNP B1 protein [Homo sapiens]
gi|565643|dbj|BAA06031.1| hnRNP B1 protein [Homo sapiens]
gi|119614243|gb|EAW93837.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_c [Homo
sapiens]
gi|119614245|gb|EAW93839.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_c [Homo
sapiens]
gi|387542844|gb|AFJ72049.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1 [Macaca
mulatta]
gi|410225454|gb|JAA09946.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343563|gb|JAA40595.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
Length = 353
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 75
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 76 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 135
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 136 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 173
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 170 VLQKYHTINGHNAEVRKALSRQ 191
>gi|326921905|ref|XP_003207194.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Meleagris gallopavo]
Length = 362
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 25 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 84
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 85 DAAMAARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 144
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 145 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 182
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 119 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 178
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 179 VLQKYHTINGHNAEVRKALSRQ 200
>gi|124028629|sp|O88569.2|ROA2_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|23266713|gb|AAN16352.1|AF452567_1 heterogeneous nuclear ribonucleoprotein A2/B1/B0 [Mus musculus]
Length = 353
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 75
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 76 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 135
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 136 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 173
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 170 VLQKYHTINGHNAEVRKALSRQ 191
>gi|351704285|gb|EHB07204.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial
[Heterocephalus glaber]
gi|355560744|gb|EHH17430.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Macaca
mulatta]
gi|355747762|gb|EHH52259.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Macaca
fascicularis]
Length = 352
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 15 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 74
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 75 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 134
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 135 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 172
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 109 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 168
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 169 VLQKYHTINGHNAEVRKALSRQ 190
>gi|440908270|gb|ELR58311.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Bos grunniens
mutus]
Length = 315
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE L KLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFG +TY+ + V
Sbjct: 8 EPEQLWKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGLVTYATVEEV 67
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGR VE KRAV RE R V ++ E+ DYF QY
Sbjct: 68 DAAMNARPHKVDGRAVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 127
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 128 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 165
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 31 AMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
+ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F
Sbjct: 90 SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAF 149
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 150 VTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 183
>gi|291394569|ref|XP_002713772.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2/B1
[Oryctolagus cuniculus]
gi|291397610|ref|XP_002715276.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2/B1
[Oryctolagus cuniculus]
Length = 352
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 75
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 76 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 135
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 136 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 173
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 170 VLQKYHTINGHNAEVRKALSRQ 191
>gi|397520388|ref|XP_003830301.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan paniscus]
Length = 320
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + VVM+DP TKRSRGF F+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTACVVMRDPNTKRSRGFEFVTYAAVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|392334561|ref|XP_003753212.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Rattus
norvegicus]
Length = 356
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 109/162 (67%), Gaps = 13/162 (8%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME E E LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKELEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM-- 139
YS + VD AM RPH++DGRVVE KRAV RE VK V ++ E+
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSLKPGAHLTVKKIFVGGIKEDTEEYYL 120
Query: 140 -DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV
Sbjct: 121 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 162
>gi|344270293|ref|XP_003406980.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Loxodonta africana]
Length = 365
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 28 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 87
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 88 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 147
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 148 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 185
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 122 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 181
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 182 VLQKYHTINGHNAEVRKALSRQ 203
>gi|395835057|ref|XP_003790500.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Otolemur
garnettii]
Length = 373
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG VM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTXXXXXVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|410058693|ref|XP_003951016.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Pan
troglodytes]
gi|119614240|gb|EAW93834.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_a [Homo
sapiens]
Length = 301
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQ 179
>gi|109109572|ref|XP_001086138.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Macaca mulatta]
Length = 320
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFI G+ + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIRGMSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D A++ RPH++DGRVVE KRAV RE VK V ++ E+ DYF QY
Sbjct: 69 DAAINARPHKVDGRVVEPKRAVSREDSQRPGAHFTVKKTFVGSIKEDTEEHHLRDYFDQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDK V+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQK 166
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K F+G + T + L+ +F+Q+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHFTVKKTFVGSIKEDTEEHHLRDYFDQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRKALSKQ 184
>gi|343961425|dbj|BAK62302.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Pan troglodytes]
Length = 301
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQ 179
>gi|426247087|ref|XP_004017318.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EP+ L KLFIGGL + T ++SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPKQLWKLFIGGLSFETTNESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|170586940|ref|XP_001898237.1| heterogeneous ribonuclear particle protein [Brugia malayi]
gi|158594632|gb|EDP33216.1| heterogeneous ribonuclear particle protein, putative [Brugia
malayi]
Length = 314
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 105/158 (66%), Gaps = 17/158 (10%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE RK+FIGGL T D++LK F+ +WG +VD VVM+DP TKRSRGFGF+++S+ V
Sbjct: 24 EPEQYRKMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEV 83
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM---------------DYFG 143
D AM+NRPH IDG+ V+ KRAVPRE R ++ I+ +++ ++FG
Sbjct: 84 DAAMANRPHIIDGKTVDPKRAVPREQSQR--SEANISSKRLYVSGVREEHTEDMFKEHFG 141
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
+YG I ++ +K TG RGFAFI FDDYD VDK VL
Sbjct: 142 KYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVL 179
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 33 EDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
E SQ SE S ++L++ G+ +D K F ++G I+ ++ D T + RGF FIT
Sbjct: 108 EQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFIT 167
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-LEQMD 140
+ + VD+ + + H I+ + K+A+ +E + KVQ E+MD
Sbjct: 168 FDDYDAVDKCVLIKSHMINNYRCDVKKALSKE----EMAKVQQQERERMD 213
>gi|393911994|gb|EFO20372.2| heterogeneous ribonuclear particle protein [Loa loa]
Length = 344
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 105/158 (66%), Gaps = 17/158 (10%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE RK+FIGGL T D++LK F+ +WG +VD VVM+DP TKRSRGFGF+++S+ V
Sbjct: 16 EPEQYRKMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEV 75
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM---------------DYFG 143
D AM+NRPH IDG+ V+ KRAVPRE R ++ I+ +++ ++FG
Sbjct: 76 DAAMANRPHIIDGKTVDPKRAVPREQSQR--SEANISSKRLYVSGVREEHTEDMFKEHFG 133
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
+YG I ++ +K TG RGFAFI FDDYD VDK VL
Sbjct: 134 KYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVL 171
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 33 EDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
E SQ SE S ++L++ G+ +D K F ++G I+ ++ D T + RGF FIT
Sbjct: 100 EQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFIT 159
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-LEQMD 140
+ + VD+ + + H I+ + K+A+ +E + KVQ E+MD
Sbjct: 160 FDDYDAVDKCVLIKSHMINNYRCDVKKALSKE----EMAKVQQQERERMD 205
>gi|219519440|gb|AAI45589.1| Heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DGAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 161
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQ 179
>gi|393911995|gb|EJD76539.1| heterogeneous ribonuclear particle protein, variant [Loa loa]
Length = 317
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 105/158 (66%), Gaps = 17/158 (10%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE RK+FIGGL T D++LK F+ +WG +VD VVM+DP TKRSRGFGF+++S+ V
Sbjct: 16 EPEQYRKMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEV 75
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM---------------DYFG 143
D AM+NRPH IDG+ V+ KRAVPRE R ++ I+ +++ ++FG
Sbjct: 76 DAAMANRPHIIDGKTVDPKRAVPREQSQR--SEANISSKRLYVSGVREEHTEDMFKEHFG 133
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
+YG I ++ +K TG RGFAFI FDDYD VDK VL
Sbjct: 134 KYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVL 171
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 33 EDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
E SQ SE S ++L++ G+ +D K F ++G I+ ++ D T + RGF FIT
Sbjct: 100 EQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFIT 159
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-LEQMD 140
+ + VD+ + + H I+ + K+A+ +E + KVQ E+MD
Sbjct: 160 FDDYDAVDKCVLIKSHMINNYRCDVKKALSKE----EMAKVQQQERERMD 205
>gi|403257202|ref|XP_003921219.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 299
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 109/164 (66%), Gaps = 13/164 (7%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
E ++PE LRKLFIGGL + T D+SL+ FEQWG + D VVMK P TKRSRGFGFITY
Sbjct: 3 ESESPNKPEQLRKLFIGGLSFETTDESLRTHFEQWGTLTDCVVMKHPNTKRSRGFGFITY 62
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQM 139
+ + VD A++ +PH++DGRVVE KRAV RE R V K+ +
Sbjct: 63 ATVEEVDAALNAKPHKVDGRVVEPKRAVLREDSQRPGAHLTVKKISVGGIKEDTEEHHLR 122
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF QYG IE + ++T++ +G KRGFAF+ F+D+D +DKIV+ K
Sbjct: 123 DYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFNDHDSMDKIVIQK 166
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 33 EDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
EDSQ +++K+ +GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T
Sbjct: 93 EDSQRPGAHLTVKKISVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVT 152
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+++ +D+ + + H ++G E ++A+ ++
Sbjct: 153 FNDHDSMDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|432098521|gb|ELK28236.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 316
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E LRKLFIGGL + T ++SL++ FEQWG + D VV++DP TKRSRGFGF+TY+ + V
Sbjct: 9 ESEQLRKLFIGGLSFETTNESLRSHFEQWGTLTDYVVLRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQMDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V K+ + DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEVHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEVHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++GR E ++A+P++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGRSCEVRKALPKQ 184
>gi|119923161|ref|XP_001251082.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2
isoform 2 [Bos taurus]
gi|297471765|ref|XP_002685448.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2 [Bos
taurus]
gi|296490543|tpg|DAA32656.1| TPA: heterogeneous nuclear ribonucleoprotein A1-like [Bos taurus]
Length = 320
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE L KLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLWKLFIGGLRFETIDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGR VE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRAVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDQGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 31 AMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
+ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F
Sbjct: 91 SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDQGSGKKRGFAF 150
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+T+ + VD+ + + H ++G + ++A+ ++
Sbjct: 151 VTFDDHDSVDKIVIQKYHTVNGHNCQVRKALSKQ 184
>gi|335302749|ref|XP_003133427.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 447
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 110 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 169
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 170 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 229
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G ++++ ++T++++G KRGF F FDD+D VDKIVL K
Sbjct: 230 GKVDTIEIITDRQSGKKRGFGFFTFDDHDPVDKIVLQK 267
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G++ + ++ D + + RGFGF T+ + VD+
Sbjct: 204 TVKKLFVGGIKEDTEEHHLRDYFEEYGKVDTIEIITDRQSGKKRGFGFFTFDDHDPVDKI 263
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 264 VLQKYHTINGHNAEVRKALSRQ 285
>gi|410954614|ref|XP_003983958.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Felis catus]
Length = 301
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T ++SL++ FEQWG I D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTNESLRSHFEQWGTITDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQMDYFGQY 145
D AM+ R H++DGRVVE KRAV RE R VTK+ + DYF QY
Sbjct: 69 DAAMNARAHKVDGRVVEPKRAVLREDSQRPGAHLTVTKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGF F+ FDD+D VDKI + K
Sbjct: 129 GKIEVIEIMTDQGSGKKRGFPFVTFDDHDSVDKIAIQK 166
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 33 EDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
EDSQ ++ K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T
Sbjct: 93 EDSQRPGAHLTVTKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDQGSGKKRGFPFVT 152
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ + VD+ + H ++G E ++A+ ++
Sbjct: 153 FDDHDSVDKIAIQKYHTVNGHNCEVRKALSKQ 184
>gi|296209042|ref|XP_002751365.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Callithrix jacchus]
Length = 375
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ EQWG + D VVM+D TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHSEQWGTLTDCVVMRDANTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQMDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V K+ + DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDNEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDNEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|195165900|ref|XP_002023776.1| GL27263 [Drosophila persimilis]
gi|194105936|gb|EDW27979.1| GL27263 [Drosophila persimilis]
Length = 226
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 111/175 (63%), Gaps = 14/175 (8%)
Query: 16 EVAGTVVPLAMIIN-KAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
E +G P I ED E E LRKLFIGGL T ++ LK F+ QWG++VDVV
Sbjct: 6 ETSGEDPPSTETIEIPDREDDDICELEHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVV 65
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI 134
VM+D TKRSRGFGFITY++S MVD+A NRPH IDG+ VE KRA+PR + R T + +
Sbjct: 66 VMRDAATKRSRGFGFITYTKSAMVDKAQENRPHIIDGKTVEAKRALPRPERETRETNISV 125
Query: 135 ------ALEQ-------MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVV 176
L+ +YF Q+G + SV ++T+K TG +RGFAFIEFDDYD V
Sbjct: 126 KKLFVGGLKDNHDEDCLREYFVQFGRVVSVKLLTDKTTGKRRGFAFIEFDDYDAV 180
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S++KLF+GGL ++D L+ +F Q+G +V V ++ D T + RGF FI + + V +
Sbjct: 124 SVKKLFVGGLKDNHDEDCLREYFVQFGRVVSVKLLTDKTTGKRRGFAFIEFDDYDAVGQG 183
Query: 102 MSN 104
+
Sbjct: 184 NTQ 186
>gi|296209046|ref|XP_002751367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Callithrix jacchus]
Length = 320
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ EQWG + D VVM+D TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHSEQWGTLTDCVVMRDANTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQMDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V K+ + DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDNEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDNEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|402587322|gb|EJW81257.1| heterogeneous nuclear ribonucleoprotein A1, partial [Wuchereria
bancrofti]
Length = 333
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 103/171 (60%), Gaps = 26/171 (15%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESK-- 96
EPE RK+FIGGL T D++LK F+ QWGE+VD +VM+DP TKRSRGFGF+++S+
Sbjct: 5 EPEQFRKMFIGGLSATTTDEALKEFYSQWGELVDCIVMRDPATKRSRGFGFVSFSKQSEA 64
Query: 97 -----------MVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA---------- 135
VD AM+ RPH IDG+ V+ KRAVPR+ R V
Sbjct: 65 SFLTLEIQIFLQVDAAMAARPHVIDGKTVDPKRAVPRDQSARSEANVSSKRLYVSGVREE 124
Query: 136 -LEQM--DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
EQM DYF Q+G + V ++ +K TG RGFAFI FDDYD VDK VL K
Sbjct: 125 HTEQMFEDYFSQFGKVLKVEIIADKNTGKPRGFAFISFDDYDPVDKCVLQK 175
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 47/82 (57%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S ++L++ G+ + + +F Q+G+++ V ++ D T + RGF FI++ + VD+
Sbjct: 112 SSKRLYVSGVREEHTEQMFEDYFSQFGKVLKVEIIADKNTGKPRGFAFISFDDYDPVDKC 171
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+I + K+A+ +E
Sbjct: 172 VLQKSHQIHNYRCDVKKALSKE 193
>gi|402887374|ref|XP_003907069.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Papio anubis]
gi|402887376|ref|XP_003907070.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Papio anubis]
Length = 320
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EP+ LRKLFIGGL + T D+SL++ FEQWG ++D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPKQLRKLFIGGLSFETIDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE K AV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKTAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVNEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I
Sbjct: 78 KVDGRVVEPKTAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVNE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|74209393|dbj|BAE23274.1| unnamed protein product [Mus musculus]
Length = 301
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 108/156 (69%), Gaps = 13/156 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVL 159
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ H I+G E ++A+ R+
Sbjct: 158 VLQEYHTINGHNAEVRKALSRQ 179
>gi|157059865|dbj|BAF79678.1| heterogeneous nuclear ribonucleoprotein B0b [Rattus norvegicus]
Length = 313
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 75
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 76 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 135
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKI L K
Sbjct: 136 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQK 173
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ H I+G E ++A+ R+
Sbjct: 170 FLQKYHTINGHNAEVRKALSRQ 191
>gi|426254471|ref|XP_004020902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 VAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|242018680|ref|XP_002429802.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
gi|212514814|gb|EEB17064.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
Length = 486
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 108/154 (70%), Gaps = 11/154 (7%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRK+FIGGLDY T DD LK F+E+WG +VDVVVMKDP ++RSRGFGFITYS++ MV
Sbjct: 23 EPEQLRKMFIGGLDYSTTDDGLKEFYEKWGMVVDVVVMKDPKSRRSRGFGFITYSKASMV 82
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR------EVKVRR-----VTKVQIALEQMDYFGQYGT 147
D+AM+NRPH IDGR VE KRAVPR E VR+ + K + +YF +YG
Sbjct: 83 DDAMNNRPHIIDGRQVEPKRAVPRDLCSRSEANVRKLFIGGIGKAVTKDDLEEYFQKYGR 142
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
+ +V K+TG RGF F+E++D D DK++L
Sbjct: 143 LTDCAIVVTKDTGEPRGFGFVEYEDVDSADKVIL 176
>gi|157059859|dbj|BAF79675.1| heterogeneous nuclear ribonucleoprotein A2 [Rattus norvegicus]
Length = 341
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKI L K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQK 161
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ H I+G E ++A+ R+
Sbjct: 158 FLQKYHTINGHNAEVRKALSRQ 179
>gi|157265559|ref|NP_001098083.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Rattus norvegicus]
gi|224493240|sp|A7VJC2.1|ROA2_RAT RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|157059861|dbj|BAF79676.1| heterogeneous nuclear ribonucleoprotein B1 [Rattus norvegicus]
Length = 353
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 75
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 76 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 135
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKI L K
Sbjct: 136 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQK 173
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 110 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ H I+G E ++A+ R+
Sbjct: 170 FLQKYHTINGHNAEVRKALSRQ 191
>gi|157059863|dbj|BAF79677.1| heterogeneous nuclear ribonucleoprotein B0a [Rattus norvegicus]
Length = 301
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 109/162 (67%), Gaps = 13/162 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
G I+++ ++T++++G KRGF F+ FDD+D VDKI L K +
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTI 165
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ H I+G E ++A+ R+
Sbjct: 158 FLQKYHTINGHNAEVRKALSRQ 179
>gi|390474591|ref|XP_002757923.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Callithrix jacchus]
Length = 339
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE RKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQPRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D A++ RPH +DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAVNARPHNVDGRVVEPKRAVSREDSQRPDAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KR FAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDKIVIQK 166
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G VV +++ EDSQ + +++K+F+GG+ T + L+ +FEQ+G+I + +
Sbjct: 79 VDGRVVEPKRAVSR--EDSQRPDAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 136
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
M D + + R F F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 137 MTDRGSGKKRDFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|390474589|ref|XP_002757922.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Callithrix jacchus]
Length = 320
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE RKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQPRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D A++ RPH +DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAVNARPHNVDGRVVEPKRAVSREDSQRPDAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KR FAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDKIVIQK 166
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G VV +++ EDSQ + +++K+F+GG+ T + L+ +FEQ+G+I + +
Sbjct: 79 VDGRVVEPKRAVSR--EDSQRPDAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEI 136
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
M D + + R F F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 137 MTDRGSGKKRDFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|444727997|gb|ELW68462.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 274
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D V KIVL K
Sbjct: 124 GKIDTIEIITDRQSGKKRGFGFVPFDDHDPVGKIVLQK 161
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 51/82 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+ + + V +
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVPFDDHDPVGKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 158 VLQKYHTINGHNAEVRKALSRQ 179
>gi|119621693|gb|EAX01288.1| hCG2020860, isoform CRA_a [Homo sapiens]
Length = 214
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/149 (54%), Positives = 104/149 (69%), Gaps = 13/149 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE VK V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYD 174
G IE + ++T++ +G KRGFAF+ FDD+D
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHD 157
>gi|351694477|gb|EHA97395.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 282
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 108/165 (65%), Gaps = 13/165 (7%)
Query: 29 NKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFG 88
++ E EPE LRKLFIGGL + T DDSL+ FE+WG + + VM+DP TKRSRGFG
Sbjct: 20 HRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTNCAVMRDPQTKRSRGFG 79
Query: 89 FITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ 138
F+TYS + VD AM RPH++DGRVVE KRAV RE V+ V ++ E+
Sbjct: 80 FVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEE 139
Query: 139 ---MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
DYF +YG E++ ++ ++++G KRGFAF FDD+D VDKIV
Sbjct: 140 YNLRDYFEKYGKTETMEVMEDRQSGKKRGFAFATFDDHDTVDKIV 184
>gi|402894543|ref|XP_003910414.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Papio anubis]
gi|402894545|ref|XP_003910415.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Papio anubis]
Length = 320
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFI G+ + T D+SL++ FEQW + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIRGMSFETTDESLRSHFEQWRTLTDCVVMRDPNTKRSRGFGFVTYTTVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D A++ RPH++DGRVVE KRAV RE VK V ++ +E+ DYF QY
Sbjct: 69 DAAINARPHKVDGRVVEPKRAVSREDSQRPGAHFTVKKTFVGSIKEDMEEHHLRDYFDQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDK V+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQK 166
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K F+G + + L+ +F+Q+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHFTVKKTFVGSIKEDMEEHHLRDYFDQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRKALSKQ 184
>gi|260304980|ref|NP_001159443.1| predicted gene 5803 [Mus musculus]
gi|148676975|gb|EDL08922.1| mCG112810 [Mus musculus]
Length = 320
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL ++T D SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFQTTDKSLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DG+VVE KRA+ R+ R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGKVVEPKRAISRQDSQRPGAHLIVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KR FAF+ FDD+D VD IV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDTIVIQK 166
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 63/111 (56%), Gaps = 7/111 (6%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVD 72
+V G VV I++ +DSQ P + ++K+F+GG+ T + L+ +FEQ+G+I
Sbjct: 78 KVDGKVVEPKRAISR--QDSQ--RPGAHLIVKKIFVGGIKEDTEEHHLRDYFEQYGKIEV 133
Query: 73 VVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ +M D + + R F F+T+ + VD + + H ++G E ++A+ ++
Sbjct: 134 IEIMTDRGSGKKRDFAFVTFDDHDSVDTIVIQKYHNVNGHNCEVRKALSKQ 184
>gi|291393062|ref|XP_002713027.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG ++D VVM+DP TKRSR FGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRDFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DVAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEERHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G K+GFA + FDD+D +DKIV+ K
Sbjct: 129 GKIEVIQIMTDRGSGKKKGFASVTFDDHDSMDKIVIQK 166
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEERHLRDYFEQYGKIEVIQ 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + +GF +T+ + +D+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKKGFASVTFDDHDSMDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|324506130|gb|ADY42625.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 346
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 98/156 (62%), Gaps = 13/156 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RK+FIGGL T D++LK F+ WGE+VD VVM+DP TKRSRGFGF+TYS+ V
Sbjct: 16 EAEQFRKMFIGGLTSTTTDETLKEFYSTWGELVDCVVMRDPTTKRSRGFGFVTYSKQSEV 75
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-----------LEQM--DYFGQY 145
+ AM NRPH IDG+ V+ KRAVPR+ R V E+M DYF Y
Sbjct: 76 NAAMENRPHVIDGKTVDPKRAVPRDQSQRNEANVSSKRLYISGVREGHTEEMFTDYFSNY 135
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
G + ++ +K TG RGFAF+ FDDYD VDK VL
Sbjct: 136 GNVIKCEVIVDKNTGKPRGFAFVTFDDYDAVDKCVL 171
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S ++L+I G+ ++ +F +G ++ V+ D T + RGF F+T+ + VD+
Sbjct: 110 SSKRLYISGVREGHTEEMFTDYFSNYGNVIKCEVIVDKNTGKPRGFAFVTFDDYDAVDKC 169
Query: 102 MSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD 140
+ + H I+ + K+A+ +E R Q E+MD
Sbjct: 170 VLIKNHMINNARCDVKKALSKEEMNR---AQQHDRERMD 205
>gi|109098438|ref|XP_001091114.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Macaca mulatta]
gi|109098440|ref|XP_001091244.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 4 [Macaca mulatta]
gi|297263360|ref|XP_002798798.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Macaca mulatta]
Length = 320
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 106/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D V M+DP TKRSRGF F+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVAMRDPNTKRSRGFRFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE K AV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKTAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDK V+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQK 166
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKTAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRKALSKQ 184
>gi|291393060|ref|XP_002713026.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 109/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG ++D VVM+DP TKRSR FGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRDFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DVAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEERHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G K+GFA + FDD+D +DKIV+ K
Sbjct: 129 GKIEVIQIMTDRGSGKKKGFASVTFDDHDSMDKIVIQK 166
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEERHLRDYFEQYGKIEVIQ 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + +GF +T+ + +D+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKKGFASVTFDDHDSMDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|213513508|ref|NP_001134615.1| Heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Salmo salar]
gi|209734656|gb|ACI68197.1| Heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Salmo salar]
Length = 339
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 107/169 (63%), Gaps = 13/169 (7%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME + EPE LRKLFIGGL + T ++SL+ FEQWG + D VVM+DP KRSRGFGF+T
Sbjct: 1 MEGHEAREPEQLRKLFIGGLSFETTEESLRIHFEQWGNLTDSVVMRDPNNKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + VD M+ RPH++DGRVVE KRAV RE R V K+ + + D
Sbjct: 61 YSCVEEVDACMAARPHKVDGRVVEPKRAVSREDSNRPGAHLTVKKIFVGGIKEDTREDHI 120
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
YF YG IE+++++ + TG KRGF F+ FDD D VDKIV K +
Sbjct: 121 REYFETYGRIETIDIMEERATGKKRGFCFVSFDDNDTVDKIVAQKYHTI 169
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T +D ++ +FE +G I + +M++ T + RGF F+++ ++ VD+
Sbjct: 102 TVKKIFVGGIKEDTREDHIREYFETYGRIETIDIMEERATGKKRGFCFVSFDDNDTVDKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
++ + H I+ E ++A+P++
Sbjct: 162 VAQKYHTINSHNCEVRKALPKQ 183
>gi|390457874|ref|XP_003732018.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 320
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTYCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++D RVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDRRVVEPKRAVSREDSQRPGAHLTVKNIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++ ++ +G KRGFAF+ FD++D VDKIV+ K
Sbjct: 129 GKIEVIEIMMDRGSGKKRGFAFVTFDNHDSVDKIVIQK 166
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 31 AMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
+ EDSQ +++ +F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F
Sbjct: 91 SREDSQRPGAHLTVKNIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMMDRGSGKKRGFAF 150
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+T+ VD+ + + H ++G E ++A+ ++
Sbjct: 151 VTFDNHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|324507426|gb|ADY43149.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 331
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 98/156 (62%), Gaps = 13/156 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RK+FIGGL T D++LK F+ WGE+VD VVM+DP TKRSRGFGF+TYS+ V
Sbjct: 16 EAEQFRKMFIGGLTSTTTDETLKEFYSTWGELVDCVVMRDPTTKRSRGFGFVTYSKQSEV 75
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-----------LEQM--DYFGQY 145
+ AM NRPH IDG+ V+ KRAVPR+ R V E+M DYF Y
Sbjct: 76 NAAMENRPHVIDGKTVDLKRAVPRDQSQRNEANVSSKRLYISGVREGHTEEMFTDYFSNY 135
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
G + ++ +K TG RGFAF+ FDDYD VDK VL
Sbjct: 136 GNVIKCEVIVDKNTGKPRGFAFVTFDDYDAVDKCVL 171
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
+ G V L + + + SQ +E S ++L+I G+ ++ +F +G ++ V
Sbjct: 86 IDGKTVDLKRAVPR--DQSQRNEANVSSKRLYISGVREGHTEEMFTDYFSNYGNVIKCEV 143
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA 135
+ D T + RGF F+T+ + VD+ + + H I+ + K+A+ +E R Q
Sbjct: 144 IVDKNTGKPRGFAFVTFDDYDAVDKCVLIKNHMINNARCDVKKALSKEEMNR---AQQHD 200
Query: 136 LEQMD 140
E+MD
Sbjct: 201 RERMD 205
>gi|170586938|ref|XP_001898236.1| heterogeneous ribonuclear particle protein [Brugia malayi]
gi|158594631|gb|EDP33215.1| heterogeneous ribonuclear particle protein, putative [Brugia
malayi]
Length = 319
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 98/158 (62%), Gaps = 21/158 (13%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE RK+FIGGL T D++LK F+ QWGE+VD +VM+DP TKRSRGFGF V
Sbjct: 12 EPEQFRKMFIGGLSATTTDEALKEFYSQWGELVDCIVMRDPATKRSRGFGF--------V 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-----------LEQM--DYFGQY 145
D AM+ RPH IDG+ V+ KRAVPR+ R V EQM DYF Q+
Sbjct: 64 DAAMAARPHVIDGKTVDPKRAVPRDQSARSEANVSSKRLYVSGVREEHTEQMFEDYFSQF 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G + V ++ +K TG RGFAFI FDDYD VDK VL K
Sbjct: 124 GKVLKVEIIADKNTGKPRGFAFISFDDYDPVDKCVLQK 161
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 47/82 (57%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S ++L++ G+ + + +F Q+G+++ V ++ D T + RGF FI++ + VD+
Sbjct: 98 SSKRLYVSGVREEHTEQMFEDYFSQFGKVLKVEIIADKNTGKPRGFAFISFDDYDPVDKC 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+I + K+A+ +E
Sbjct: 158 VLQKSHQIHNYRCDVKKALSKE 179
>gi|339233086|ref|XP_003381660.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
gi|316979494|gb|EFV62286.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
Length = 322
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 121/178 (67%), Gaps = 16/178 (8%)
Query: 27 IINKAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKR 83
IN ++D PE RK+FIGG+ T+D+ L+ F+ +WGEI DVVVM+DPV+KR
Sbjct: 7 FINSRVQDGDVFLPEKDEQNRKIFIGGITVNTSDEDLRTFYSKWGEITDVVVMRDPVSKR 66
Query: 84 SRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--- 135
SRGFGF+TY++ + V+ AM+ RPH IDG+ VE KRA+P++V + V KV I+
Sbjct: 67 SRGFGFVTYADPEQVNAAMAARPHLIDGKEVEPKRAMPKDVMNKPEAHISVKKVYISGIK 126
Query: 136 ---LEQM--DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
E M +YF QYG+++ V++ ++ TG KRGFAF+ FDDYD VD++VL+K +++
Sbjct: 127 DEHTEDMLREYFMQYGSVQEVDIKVDQGTGKKRGFAFVTFDDYDPVDRVVLEKSHMID 184
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 30 KAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+AM ++PE S++K++I G+ +D L+ +F Q+G + +V + D T + RG
Sbjct: 101 RAMPKDVMNKPEAHISVKKVYISGIKDEHTEDMLREYFMQYGSVQEVDIKVDQGTGKKRG 160
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
F F+T+ + VD + + H ID + + K+A+ +E
Sbjct: 161 FAFVTFDDYDPVDRVVLEKSHMIDNKRCDVKKALSKE 197
>gi|393911996|gb|EJD76540.1| RNA recognition domain-containing protein [Loa loa]
Length = 309
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 99/151 (65%), Gaps = 13/151 (8%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL T D++LK F+ QWGE+VD +VM+DP TKRSRGFGF+++S+ VD AM+ R
Sbjct: 1 MFIGGLSATTTDEALKEFYSQWGELVDCIVMRDPATKRSRGFGFVSFSKQSEVDAAMAAR 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKV-----------QIALEQM--DYFGQYGTIESVN 152
PH IDG+ V+ KRAVPR+ R V + EQM DYF Q+G + V
Sbjct: 61 PHVIDGKTVDPKRAVPRDQSARSEANVSSKRLYVSGVREEHTEQMFEDYFSQFGKVLKVE 120
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
++ +K TG RGFAFI FDDYD VDK VL K
Sbjct: 121 IIADKNTGKPRGFAFISFDDYDPVDKCVLQK 151
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 47/82 (57%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S ++L++ G+ + + +F Q+G+++ V ++ D T + RGF FI++ + VD+
Sbjct: 88 SSKRLYVSGVREEHTEQMFEDYFSQFGKVLKVEIIADKNTGKPRGFAFISFDDYDPVDKC 147
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+I + K+A+ +E
Sbjct: 148 VLQKSHQIHNYRCDVKKALSKE 169
>gi|392339470|ref|XP_003753820.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Rattus norvegicus]
Length = 341
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 108/158 (68%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E KLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFCKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH IDGRVVE KRAV RE VK V ++ E+ DYF +Y
Sbjct: 64 DVAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 124 GKIDTIEIITDRQSGXKRGFGFVTFDDHDPVDKIVLQK 161
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 51/82 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + RGFGF+T+ + VD+
Sbjct: 98 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGXKRGFGFVTFDDHDPVDKI 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H +G E ++A+ R+
Sbjct: 158 VLQKYHTKNGHNAEVRKALSRQ 179
>gi|312083052|ref|XP_003143700.1| hypothetical protein LOAG_08120 [Loa loa]
Length = 294
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 99/158 (62%), Gaps = 21/158 (13%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE RK+FIGGL T D++LK F+ QWGE+VD +VM+DP TKRSRGFGF V
Sbjct: 12 EPEQFRKMFIGGLSATTTDEALKEFYSQWGELVDCIVMRDPATKRSRGFGF--------V 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKV-----------QIALEQM--DYFGQY 145
D AM+ RPH IDG+ V+ KRAVPR+ R V + EQM DYF Q+
Sbjct: 64 DAAMAARPHVIDGKTVDPKRAVPRDQSARSEANVSSKRLYVSGVREEHTEQMFEDYFSQF 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G + V ++ +K TG RGFAFI FDDYD VDK VL K
Sbjct: 124 GKVLKVEIIADKNTGKPRGFAFISFDDYDPVDKCVLQK 161
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 47/82 (57%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S ++L++ G+ + + +F Q+G+++ V ++ D T + RGF FI++ + VD+
Sbjct: 98 SSKRLYVSGVREEHTEQMFEDYFSQFGKVLKVEIIADKNTGKPRGFAFISFDDYDPVDKC 157
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H+I + K+A+ +E
Sbjct: 158 VLQKSHQIHNYRCDVKKALSKE 179
>gi|195349782|ref|XP_002041421.1| GM10160 [Drosophila sechellia]
gi|194123116|gb|EDW45159.1| GM10160 [Drosophila sechellia]
Length = 472
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 111/164 (67%), Gaps = 14/164 (8%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
ED C E E LRKLFIGGL T +++LK F+ QWG +VDVVVM+D TKRSRGFGFITY
Sbjct: 22 EDDIC-ELEHLRKLFIGGLAPYTTEENLKVFYGQWGRVVDVVVMRDAATKRSRGFGFITY 80
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ-------M 139
++S MVD A NRPH IDG+ VE KRA+PR + R T + + L+
Sbjct: 81 TKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLR 140
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+YF Q+G + SV ++T+K TG +RGFAF+EFDDYD VDK +L K
Sbjct: 141 EYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 184
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S++KLF+GGL +++ L+ +F Q+G +V V ++ D T + RGF F+ + + VD+A
Sbjct: 121 SVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA 180
Query: 102 MSNRPHEIDGRVVETKRAV 120
+ + H I V+ K+++
Sbjct: 181 ILKKQHAIKYVHVDVKKSI 199
>gi|399758|gb|AAB27595.1| FBRNP [Homo sapiens]
Length = 269
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D +VM+DP TKRSRGFGF+TYS V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCLVMRDPQTKRSRGFGFVTYSCVTEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D A+ RP ++DGRVVE KRAV RE V+ V ++ E+ DYF +Y
Sbjct: 90 DAAIGARPFKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGSIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFA + FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFASVTFDDHDTVDKIVVQK 187
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 53/83 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+G + T + +L+ +FE++G+I + VM+D + + RGF +T+ + VD+
Sbjct: 124 TVKKIFVGSIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFASVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPREV 124
+ + H I+G E K+A+ ++V
Sbjct: 184 VVQKYHTINGHNCEVKKALAKQV 206
>gi|195574232|ref|XP_002105093.1| GD18114 [Drosophila simulans]
gi|194201020|gb|EDX14596.1| GD18114 [Drosophila simulans]
Length = 472
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 111/164 (67%), Gaps = 14/164 (8%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
ED C E E LRKLFIGGL T +++LK F+ QWG +VDVVVM+D TKRSRGFGFITY
Sbjct: 22 EDDIC-ELEHLRKLFIGGLAPYTTEENLKVFYGQWGRVVDVVVMRDAATKRSRGFGFITY 80
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ-------M 139
++S MVD A NRPH IDG+ VE KRA+PR + R T + + L+
Sbjct: 81 TKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLR 140
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+YF Q+G + SV ++T+K TG +RGFAF+EFDDYD VDK +L K
Sbjct: 141 EYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 184
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 49/79 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S++KLF+GGL +++ L+ +F Q+G +V V ++ D T + RGF F+ + + VD+A
Sbjct: 121 SVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA 180
Query: 102 MSNRPHEIDGRVVETKRAV 120
+ + H I V+ K+++
Sbjct: 181 ILKKQHAIKYVHVDVKKSI 199
>gi|301508557|gb|ADK78240.1| heterogeneous nuclear ribonucleoprotein A2 [Schmidtea mediterranea]
Length = 331
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 105/156 (67%), Gaps = 13/156 (8%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E RKLFIGGL +T++ L+ ++EQWGE+VD VVMKD T RSRGFGF+TY + +MVDE
Sbjct: 14 EQFRKLFIGGLTPQTDEIRLRKYYEQWGELVDFVVMKDNKTGRSRGFGFVTYRDPEMVDE 73
Query: 101 AMSNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGT 147
A +NRPHE+DG++VE KRA+PRE + V ++ K + E + YF YGT
Sbjct: 74 AQNNRPHEVDGKIVEAKRAMPREDSNTPESHMTVNKLFVGGLKKDVTTEHLRHYFTSYGT 133
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
I +VT K++G RGF F+ FDDYD VDK +L K
Sbjct: 134 ITDCEIVTWKDSGESRGFGFVTFDDYDPVDKAILYK 169
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 11/113 (9%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVD 72
EV G +V +AM + PES + KLF+GGL + L+ +F +G I D
Sbjct: 81 EVDGKIVEAK----RAMPREDSNTPESHMTVNKLFVGGLKKDVTTEHLRHYFTSYGTITD 136
Query: 73 --VVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+V KD + SRGFGF+T+ + VD+A+ +PH+I V+ K+A+ ++
Sbjct: 137 CEIVTWKD--SGESRGFGFVTFDDYDPVDKAILYKPHQIGSSRVDVKKALSKD 187
>gi|226473316|emb|CAX71344.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 236
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 101/156 (64%), Gaps = 13/156 (8%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E RKLFIGGL T + LK F+ QWGEIVDVVVMKD T RSRGFGFITY E +MVD
Sbjct: 14 EQFRKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDA 73
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKV-------QIALEQM-DYFGQYGT 147
A +NRPHEIDG+ VE KRA+PRE VTK+ + E++ +YF +YG
Sbjct: 74 AQANRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGN 133
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
I +V KE+G RGF F+ FDDYD VDK +L K
Sbjct: 134 ITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYK 169
>gi|256080846|ref|XP_002576687.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 315
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 99/156 (63%), Gaps = 13/156 (8%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E RKLFIGGL T + LK F+ QWGEIVDVVVMKD T RSRGFGFITY E +MVD
Sbjct: 14 EQFRKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDA 73
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQYGT 147
A +NRPHEIDG+ VE KRA+PRE VTK+ + E +YF +YG
Sbjct: 74 AQANRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGN 133
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
I +V KE+G RGF F+ FDDYD VDK +L K
Sbjct: 134 ITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYK 169
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 30 KAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+AM + PES + KLF+GGL + L+ +F ++G I + V+ + SRG
Sbjct: 91 RAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRG 150
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
FGF+T+ + VD+A+ +PH I + K+A+ +E
Sbjct: 151 FGFVTFDDYDPVDKAILYKPHHIGSSRADVKKALSKE 187
>gi|353232562|emb|CCD79917.1| putative heterogeneous nuclear ribonucleoprotein [Schistosoma
mansoni]
Length = 315
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 99/156 (63%), Gaps = 13/156 (8%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E RKLFIGGL T + LK F+ QWGEIVDVVVMKD T RSRGFGFITY E +MVD
Sbjct: 14 EQFRKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDA 73
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQMDYFGQYGT 147
A +NRPHEIDG+ VE KRA+PRE VTK+ + E +YF +YG
Sbjct: 74 AQANRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGN 133
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
I +V KE+G RGF F+ FDDYD VDK +L K
Sbjct: 134 ITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYK 169
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 30 KAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+AM + PES + KLF+GGL + L+ +F ++G I + V+ + SRG
Sbjct: 91 RAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRG 150
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
FGF+T+ + VD+A+ +PH I + K+A+ +E
Sbjct: 151 FGFVTFDDYDPVDKAILYKPHHIGSSRADVKKALSKE 187
>gi|296485784|tpg|DAA27899.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 341
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/165 (45%), Positives = 112/165 (67%), Gaps = 13/165 (7%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
Q E E +RKLFIGGL ++T ++SL+ +++QWGE+ D VV++D ++RSRG GF+T+S
Sbjct: 13 QQKEAEQIRKLFIGGLSFQTTEESLRKYYQQWGELTDCVVLRDFASQRSRGCGFVTFSSV 72
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYF 142
VD AM+ RPH IDGRV+E +RA+PRE +R V ++ E+ +YF
Sbjct: 73 TEVDAAMAARPHSIDGRVLEPRRAIPREASGQRGAHWTLKKLFVGGIKEDTEEHHLREYF 132
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+YG I+++ ++T++++G KRGF F+ FDDYD VDKIVL K +
Sbjct: 133 EKYGKIDAIEIITDRQSGRKRGFGFVTFDDYDPVDKIVLQKYHAI 177
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 51/79 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+L+KLF+GG+ T + L+ +FE++G+I + ++ D + R RGFGF+T+ + VD+
Sbjct: 110 TLKKLFVGGIKEDTEEHHLREYFEKYGKIDAIEIITDRQSGRKRGFGFVTFDDYDPVDKI 169
Query: 102 MSNRPHEIDGRVVETKRAV 120
+ + H I+G E ++A+
Sbjct: 170 VLQKYHAINGHHAEVRKAL 188
>gi|29841163|gb|AAP06176.1| SJCHGC06206 protein [Schistosoma japonicum]
gi|226473310|emb|CAX71341.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473312|emb|CAX71342.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473314|emb|CAX71343.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473318|emb|CAX71345.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 313
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 101/156 (64%), Gaps = 13/156 (8%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E RKLFIGGL T + LK F+ QWGEIVDVVVMKD T RSRGFGFITY E +MVD
Sbjct: 14 EQFRKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDA 73
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKV-------QIALEQM-DYFGQYGT 147
A +NRPHEIDG+ VE KRA+PRE VTK+ + E++ +YF +YG
Sbjct: 74 AQANRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGN 133
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
I +V KE+G RGF F+ FDDYD VDK +L K
Sbjct: 134 ITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYK 169
>gi|403287876|ref|XP_003935149.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 356
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 105/158 (66%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T SL++ FEQWG + VVM+ P TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTHKSLRSHFEQWGTLTGCVVMRHPNTKHSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH+++GRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVNGRVVEPKRAVSREDSQRPGAHLTVKKIFVGDIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G K+GFAF+ FDD+D VDKI++ K
Sbjct: 129 GKIEVIEIMTDRSSGKKKGFAFVTFDDHDSVDKIIIKK 166
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+G + T + L+ +FEQ+G+I +
Sbjct: 78 KVNGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGDIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + +GF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRSSGKKKGFAFVTFDDHDSVDKIIIKKYHTVNGHNCEVRKALSKQ 184
>gi|350015551|dbj|GAA42894.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Clonorchis
sinensis]
Length = 292
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 110/159 (69%), Gaps = 18/159 (11%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
S+ + +KLF+GGL+ +TN++SL++++ QWGEI DVVVMKDP + +SRGFGF+T+ E+
Sbjct: 7 SKADQDKKLFVGGLNPKTNEESLRSYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEAAS 66
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM---------------DYF 142
VD+A +NRPH++DG+ V++KRA+PRE +V A++++ +YF
Sbjct: 67 VDKAQANRPHKLDGKEVDSKRAMPRE---ETSPEVHAAVKKIFVGGLKKDVTNDDLAEYF 123
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
GQYGT+ +V K+T RGFAF+ FDD D VDK++L
Sbjct: 124 GQYGTVTDAQIVMAKDTNTSRGFAFVTFDDTDSVDKVIL 162
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 60/99 (60%), Gaps = 8/99 (8%)
Query: 30 KAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVD--VVVMKDPVTKRS 84
+AM + S PE +++K+F+GGL +D L +F Q+G + D +V+ KD T S
Sbjct: 87 RAMPREETS-PEVHAAVKKIFVGGLKKDVTNDDLAEYFGQYGTVTDAQIVMAKD--TNTS 143
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGF F+T+ ++ VD+ + RPH I+G + ++A+ RE
Sbjct: 144 RGFAFVTFDDTDSVDKVILARPHTINGHKADVRKALSRE 182
>gi|257215987|emb|CAX83143.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215989|emb|CAX83144.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215991|emb|CAX83145.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215993|emb|CAX83146.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215995|emb|CAX83147.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215997|emb|CAX83148.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215999|emb|CAX83149.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216001|emb|CAX83150.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216003|emb|CAX83151.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216005|emb|CAX83152.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 168
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 98/154 (63%), Gaps = 13/154 (8%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E RKLFIGGL T + LK F+ QWGEIVDVVVMKD T RSRGFGFITY E +MVD
Sbjct: 14 EQFRKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVDA 73
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQMDYFGQYGT 147
A +NRPHEIDG+ VE KRA+PRE VTK+ + E +YF +YG
Sbjct: 74 AQANRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGN 133
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
I +V KE+G RGF F+ FDDYD VDK +L
Sbjct: 134 ITECEVVAWKESGESRGFGFVTFDDYDPVDKAIL 167
>gi|296473573|tpg|DAA15688.1| TPA: heterogeneous nuclear ribonucleoprotein A1-like [Bos taurus]
Length = 320
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 103/158 (65%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T ++SL++ FEQWG + D V+M+DP TK SRGFG +TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTNESLRSHFEQWGTLTDCVLMRDPNTKHSRGFGLVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-------------LEQMDYFGQY 145
D AM+ RPH++DGRVVE KRAV E R + + DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSGEDSQRPGAHLTVKKIFVGGIKEDTEEHHXRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 RKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV + + EDSQ +++K+F+GG+ T + + +FEQ+ +I +
Sbjct: 78 KVDGRVVEPKRAV--SGEDSQRPGAHLTVKKIFVGGIKEDTEEHHXRDYFEQYRKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|226472210|emb|CAX77141.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 108/156 (69%), Gaps = 12/156 (7%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
S+ + +KLFIGGL +T+++SLK ++ QWGEI+DVVVMKDP +++SRGFGF+TY ++
Sbjct: 8 SKADQDKKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYRDASS 67
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPRE-------VKVRRV----TKVQIALEQM-DYFGQY 145
VD A +NRPH +DG+ V+TKRA+PRE V+++ K + E + DYF Q+
Sbjct: 68 VDAAQNNRPHTVDGKEVDTKRAMPREETSPEVHAAVKKIFVGALKKDVTNEDLSDYFSQF 127
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
GT+ +V KET RGFAF+ FDD D VDK++L
Sbjct: 128 GTVTDAQIVIAKETNTSRGFAFVTFDDTDAVDKVIL 163
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 30 KAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+AM + S PE +++K+F+G L ++ L +F Q+G + D ++ T SRG
Sbjct: 88 RAMPREETS-PEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTDAQIVIAKETNTSRG 146
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
F F+T+ ++ VD+ + RPH I + ++A+ RE
Sbjct: 147 FAFVTFDDTDAVDKVILARPHTIKDSKADVRKALSRE 183
>gi|226472218|emb|CAX77145.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 307
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 108/156 (69%), Gaps = 12/156 (7%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
S+ + +KLFIGGL +T+++SLK ++ QWGEI+DVVVMKDP +++SRGFGF+TY ++
Sbjct: 8 SKADQDKKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYRDASS 67
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPRE-------VKVRRV----TKVQIALEQM-DYFGQY 145
VD A +NRPH +DG+ V+TKRA+PRE V+++ K + E + DYF Q+
Sbjct: 68 VDAAQNNRPHTVDGKEVDTKRAMPREETSPEVHAAVKKIFVGALKKDVTNEDLSDYFSQF 127
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
GT+ +V K+T RGFAF+ FDD D VDK++L
Sbjct: 128 GTVTDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVIL 163
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Query: 30 KAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVD--VVVMKDPVTKRS 84
+AM + S PE +++K+F+G L ++ L +F Q+G + D +V+ KD T S
Sbjct: 88 RAMPREETS-PEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTDAQIVIAKD--TNTS 144
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGF F+T+ ++ VD+ + RPH I + ++A+ RE
Sbjct: 145 RGFAFVTFDDTDAVDKVILARPHTIKDSKADVRKALSRE 183
>gi|410036043|ref|XP_003949991.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan troglodytes]
Length = 320
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 106/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQ G + D VVM+DP TK S GFGF+TY+ K V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQRGTLTDCVVMRDPNTKCSTGFGFVTYATVKEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM---DYFGQY 145
+ AM+ RPH++DGRVVE KRAV RE VK V ++ E+ DYF QY
Sbjct: 69 EAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKTFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G E + ++T++ +G KRGFAF+ FDD+D VDK V+ K
Sbjct: 129 GKTEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQK 166
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K F+GG+ T + L+ +FEQ+G+ +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKTFVGGIKEDTEEHHLRDYFEQYGKTEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHTVNGHNCEVRKALSKQ 184
>gi|328708038|ref|XP_001949057.2| PREDICTED: hypothetical protein LOC100160789 [Acyrthosiphon pisum]
Length = 401
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 105/152 (69%), Gaps = 12/152 (7%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EP RKLFIGGLDY +DSL+ FE WGEIVDVVV+KDP+TKRSRGFGF+ YS+S MV
Sbjct: 14 EPVQTRKLFIGGLDYSATEDSLRNTFEVWGEIVDVVVIKDPITKRSRGFGFVIYSKSSMV 73
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQMDYFGQYG 146
D AMSN PH ++GR VETKRAV R+ + V+++ K Q + ++YF ++G
Sbjct: 74 DRAMSNGPHNVNGRNVETKRAVSRDDIDKPNSKIAVKKMFIYGIKEQSEINLVEYFKKFG 133
Query: 147 TIESVNMVTNKETGAKRGFAFIEFDDYDVVDK 178
I + +VT K +G ++G+ FIE+D+ VD+
Sbjct: 134 NIIHIKIVTAKNSGERKGYGFIEYDNTISVDQ 165
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 30 KAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+A+ +P S ++K+FI G+ ++ + +L +F+++G I+ + ++ + +G
Sbjct: 93 RAVSRDDIDKPNSKIAVKKMFIYGIKEQS-EINLVEYFKKFGNIIHIKIVTAKNSGERKG 151
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRA 119
+GFI Y + VD+A + H + GR +E +A
Sbjct: 152 YGFIEYDNTISVDQATRIKSHLVAGRKLEVSKA 184
>gi|410047791|ref|XP_003954550.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2 [Pan troglodytes]
Length = 320
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 106/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGG+ + T D+SL++ FEQWG + D +VM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGVSFETIDESLRSHFEQWGMLTDCLVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNTRPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
IE + ++T+ +G KRGFAF+ FDD+D V KIV+ K
Sbjct: 129 EKIEVIEIMTDXGSGKKRGFAFVTFDDHDSVXKIVIQK 166
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+ +I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYEKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + V + + + H + G E ++A+ ++
Sbjct: 136 IMTDXGSGKKRGFAFVTFDDHDSVXKIVIQKYHTVKGHNCEVRKALSKQ 184
>gi|56758132|gb|AAW27206.1| SJCHGC06052 protein [Schistosoma japonicum]
gi|226472196|emb|CAX77134.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472198|emb|CAX77135.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472200|emb|CAX77136.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472202|emb|CAX77137.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472206|emb|CAX77139.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472208|emb|CAX77140.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472212|emb|CAX77142.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472214|emb|CAX77143.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472216|emb|CAX77144.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472220|emb|CAX77146.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472222|emb|CAX77147.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226473414|emb|CAX71392.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 108/156 (69%), Gaps = 12/156 (7%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
S+ + +KLFIGGL +T+++SLK ++ QWGEI+DVVVMKDP +++SRGFGF+TY ++
Sbjct: 8 SKADQDKKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYRDASS 67
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPRE-------VKVRRV----TKVQIALEQM-DYFGQY 145
VD A +NRPH +DG+ V+TKRA+PRE V+++ K + E + DYF Q+
Sbjct: 68 VDAAQNNRPHTVDGKEVDTKRAMPREETSPEVHAAVKKIFVGALKKDVTNEDLSDYFSQF 127
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
GT+ +V K+T RGFAF+ FDD D VDK++L
Sbjct: 128 GTVTDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVIL 163
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Query: 30 KAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVD--VVVMKDPVTKRS 84
+AM + S PE +++K+F+G L ++ L +F Q+G + D +V+ KD T S
Sbjct: 88 RAMPREETS-PEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTDAQIVIAKD--TNTS 144
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGF F+T+ ++ VD+ + RPH I + ++A+ RE
Sbjct: 145 RGFAFVTFDDTDAVDKVILARPHTIKDSKADVRKALSRE 183
>gi|444509175|gb|ELV09196.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 346
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 105/160 (65%), Gaps = 17/160 (10%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E LRKLFIGGL + T D+SL++ FEQ G + D VVM+DP TK SRGFGF+T + + V
Sbjct: 9 ELEQLRKLFIGGLSFETTDESLRSHFEQRGTLTDCVVMRDPNTKHSRGFGFVTSATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM---------------DYFG 143
D AM+ RPH++DGRVVE KRAV RE R + +E++ DYF
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQR--PGAHLTVEKIFVGGIKEDTEEHHLRDYFE 126
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
QYG IE + ++T++ +G KRGFAF FDD+D VDKIV+ K
Sbjct: 127 QYGKIEVIEIMTDRGSGKKRGFAFKTFDDHDSVDKIVIQK 166
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ ++ K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPKRAVSR--EDSQRPGAHLTVEKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IMTDRGSGKKRGFAFKTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|359073189|ref|XP_003587038.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 321
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 105/158 (66%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH+ + E KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DVAMNARPHKGTEELWELKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 31 AMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
+ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F
Sbjct: 91 SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAF 150
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 151 VTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|147903976|ref|NP_001087778.1| MGC84815 protein [Xenopus laevis]
gi|51703946|gb|AAH81212.1| MGC84815 protein [Xenopus laevis]
Length = 291
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 113/160 (70%), Gaps = 14/160 (8%)
Query: 36 QCSEPESL--RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
Q +P++ +KLF+GGL+ +TN+DSL+A++ QWGEI DVVVMKDP + +SRGFGF+T+
Sbjct: 3 QVGDPKADQDKKLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFK 62
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPRE-------VKVRRV----TKVQIALEQM-DY 141
E+ VD+A ++RPH++DG+ V++KRA+PRE V+++ K + E + +Y
Sbjct: 63 EASSVDKAQADRPHKVDGKDVDSKRAMPREETSPEVHAAVKKIFVGGLKKDVTNEDLAEY 122
Query: 142 FGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
FG++G + ++V K+T RGFAF+ FDD D VDK++L
Sbjct: 123 FGKFGNVTDASIVVAKDTNTSRGFAFVTFDDTDSVDKVIL 162
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 74/129 (57%), Gaps = 12/129 (9%)
Query: 30 KAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVD--VVVMKDPVTKRS 84
+AM + S PE +++K+F+GGL ++ L +F ++G + D +VV KD T S
Sbjct: 87 RAMPREETS-PEVHAAVKKIFVGGLKKDVTNEDLAEYFGKFGNVTDASIVVAKD--TNTS 143
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMDYFGQ 144
RGF F+T+ ++ VD+ + RPH I G + ++A+ RE ++R+V + + +MDY
Sbjct: 144 RGFAFVTFDDTDSVDKVILARPHMIGGHKADVRKALSRE-ELRKV-QTKPPPARMDYNSS 201
Query: 145 YGTIESVNM 153
+ E NM
Sbjct: 202 WN--EGPNM 208
>gi|355558052|gb|EHH14832.1| hypothetical protein EGK_00819, partial [Macaca mulatta]
Length = 278
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 106/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T D+SL++ EQWG ++D VV++DP TKRSRGFGF+TY+ + V
Sbjct: 9 ELEQRRKLFIGGLSFETTDESLRSHCEQWGTLMDCVVLRDPNTKRSRGFGFVTYATVQEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQMDYFGQY 145
D M+ RPH++DGR VETKRAV E R V KV + +DYF Q+
Sbjct: 69 DAVMNARPHKVDGRAVETKRAVSGEDSQRPGGHLTVKKVFVGGIKEDTEEHHLIDYFQQF 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G +E + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKMEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 33 EDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
EDSQ +++K+F+GG+ T + L +F+Q+G++ + +M D + + RGF F+T
Sbjct: 93 EDSQRPGGHLTVKKVFVGGIKEDTEEHHLIDYFQQFGKMEVIEIMTDRGSGKKRGFAFVT 152
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ + VD+ + + H ++G E ++A+ ++
Sbjct: 153 FDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184
>gi|402860565|ref|XP_003894696.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 321
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRK+FIGGL + T D+SL++ FEQ G + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKIFIGGLSFETTDESLRSHFEQRGMLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RP ++DGR V+ KRAV RE VK + V ++ E+ DYF QY
Sbjct: 69 DAAMNARPRKVDGRTVKPKRAVSREDSQRSGAHLTVKKKFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KR FAFI FD++D VDK V+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRDFAFITFDNHDSVDKTVIQK 166
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 20 TVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKD 78
TV P + + EDSQ S +++K F+GG+ T + L+ +FEQ+G+I + +M D
Sbjct: 83 TVKPKRAV---SREDSQRSGAHLTVKKKFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTD 139
Query: 79 PVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ + R F FIT+ VD+ + + H ++G E ++A+ ++
Sbjct: 140 RGSGKKRDFAFITFDNHDSVDKTVIQKYHTVNGHNYEARKALSKQ 184
>gi|351697839|gb|EHB00758.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 236
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 107/158 (67%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E LRKLFI GL + T D+SL++ FEQWG ++D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 ESEQLRKLFIQGLSFETTDESLRSCFEQWGMLMDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ R H++ GRVVE KRAV RE VK V ++ E+ DYF Q
Sbjct: 69 DAAMNARLHKVGGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQC 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 129 GKIEVIEIITDRGSGKKRGFAFVTFDDHDSVDKIVIQK 166
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ G+I +
Sbjct: 78 KVGGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQCGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
++ D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 136 IITDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALLKQ 184
>gi|402585407|gb|EJW79347.1| heterogeneous nuclear ribonucleoprotein A1 [Wuchereria bancrofti]
Length = 322
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 100/151 (66%), Gaps = 17/151 (11%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL T D++LK F+ +WG +VD VVM+DP TKRSRGFGF+++S+ VD AM+NR
Sbjct: 1 MFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAAMANR 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM---------------DYFGQYGTIES 150
PH IDG+ V+ KRAVPRE R ++ I+ +++ ++FG+YG I
Sbjct: 61 PHIIDGKTVDPKRAVPREQSQR--SEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILK 118
Query: 151 VNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
++ +K TG RGFAFI FDDYD VDK VL
Sbjct: 119 CEIIADKNTGKPRGFAFITFDDYDAVDKCVL 149
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 33 EDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
E SQ SE S ++L++ G+ +D K F ++G I+ ++ D T + RGF FIT
Sbjct: 78 EQSQRSEANISSKRLYVSGVREEHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFIT 137
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-LEQMD 140
+ + VD+ + + H I+ + K+A+ +E + KVQ E+MD
Sbjct: 138 FDDYDAVDKCVLIKSHMINNYRCDVKKALSKE----EMAKVQQQERERMD 183
>gi|115532850|ref|NP_001040945.1| Protein HRP-1, isoform d [Caenorhabditis elegans]
gi|351063093|emb|CCD71137.1| Protein HRP-1, isoform d [Caenorhabditis elegans]
Length = 347
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 101/158 (63%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE+LRK+F+GGL T DD ++ F+ Q+GEI D++VM+DP TKRSRGFGF+T+S V
Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-----------LEQM--DYFGQY 145
D AM RPH IDG+ V+ KRAVPR+ K R + V E M +YF +Y
Sbjct: 78 DAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKY 137
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
GT+ ++ +K T RGF F+ FDD+D VD+ VL K
Sbjct: 138 GTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 10 KLVPGLEVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWG 68
K P + TV P + +D SE S ++L++ G+ +D L +F ++G
Sbjct: 82 KQRPHIIDGKTVDPKRAV---PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYG 138
Query: 69 EIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ ++ D T++ RGFGF+T+ + VD+ + + H ++G + ++ + ++
Sbjct: 139 TVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKD 193
>gi|25145229|ref|NP_500326.2| Protein HRP-1, isoform a [Caenorhabditis elegans]
gi|74965787|sp|Q22037.1|ROA1_CAEEL RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1
gi|217300|dbj|BAA01645.1| hnRNP like protein [Caenorhabditis elegans]
gi|351063090|emb|CCD71134.1| Protein HRP-1, isoform a [Caenorhabditis elegans]
Length = 346
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 101/158 (63%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE+LRK+F+GGL T DD ++ F+ Q+GEI D++VM+DP TKRSRGFGF+T+S V
Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-----------LEQM--DYFGQY 145
D AM RPH IDG+ V+ KRAVPR+ K R + V E M +YF +Y
Sbjct: 78 DAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKY 137
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
GT+ ++ +K T RGF F+ FDD+D VD+ VL K
Sbjct: 138 GTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 10 KLVPGLEVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWG 68
K P + TV P + +D SE S ++L++ G+ +D L +F ++G
Sbjct: 82 KQRPHIIDGKTVDPKRAV---PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYG 138
Query: 69 EIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ ++ D T++ RGFGF+T+ + VD+ + + H ++G + ++ + ++
Sbjct: 139 TVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKD 193
>gi|441657453|ref|XP_004091180.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 379
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 104/158 (65%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIG L + T DDSL+ +FE+WG + D VVM+D TKRSRGFGF+ YS V
Sbjct: 30 EPEQLRKLFIGDLSFETTDDSLREYFEKWGTLTDCVVMRDAQTKRSRGFGFVAYSCVTEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM RP ++DGRVVE KRAV RE V+ V ++ E+ DYF +Y
Sbjct: 90 DAAMCARPCKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGSIKEDTEEYNLRDYFEKY 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ ++ ++++G KRGFA + FDD+D VDK V+ K
Sbjct: 150 GKIETIEVMEDRQSGKKRGFASVTFDDHDTVDKTVVQK 187
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 52/83 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+G + T + +L+ +FE++G+I + VM+D + + RGF +T+ + VD+
Sbjct: 124 TVKKIFVGSIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFASVTFDDHDTVDKT 183
Query: 102 MSNRPHEIDGRVVETKRAVPREV 124
+ + H I+G E K+A ++V
Sbjct: 184 VVQKYHTINGHNCEVKKAFAKQV 206
>gi|350580575|ref|XP_003480852.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 349
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 105/156 (67%), Gaps = 13/156 (8%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E KLFIGGL RT + SL+ +++QWG++ D VV++DP KRSRGFGF+T+S VD
Sbjct: 18 EQFHKLFIGGLCSRTTEKSLRNYYQQWGKLTDCVVLRDPSNKRSRGFGFVTFSSVAEVDA 77
Query: 101 AMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQYGT 147
AM+ RPH +DG+VV+ KRAV RE VK V ++ E+ DYF +YG
Sbjct: 78 AMAARPHSVDGKVVDPKRAVAREESEKPGAHLAVKKLFVGGIKEDTEEHHLRDYFEKYGK 137
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
I+++ ++T++++G KRGF F+ FDD+D VDKIVL K
Sbjct: 138 IDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQK 173
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 52/82 (63%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 110 AVKKLFVGGIKEDTEEHHLRDYFEKYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E +A+ R+
Sbjct: 170 VLQKYHTINGHHAEVGKALSRQ 191
>gi|440912092|gb|ELR61691.1| hypothetical protein M91_00743 [Bos grunniens mutus]
Length = 266
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 105/158 (66%), Gaps = 14/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E L KLFIGGL + T D+SL++ FEQWG + D VVM DP TKRSRGFGF+TY+ + V
Sbjct: 9 ELEQLPKLFIGGLSFETTDESLRSHFEQWGTLTDCVVM-DPNTKRSRGFGFVTYATVEEV 67
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RP ++DGRVV KRAV RE R V ++ E+ DYF QY
Sbjct: 68 DAAMNARPQKMDGRVVAPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 127
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 128 GKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQK 165
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 31 AMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
+ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F
Sbjct: 90 SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAF 149
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 150 VTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 183
>gi|297676076|ref|XP_002815972.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Pongo abelii]
Length = 320
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 104/164 (63%), Gaps = 13/164 (7%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
E EP+ RKLFIGGL + T D+SL++ EQWG + D VM+DP TK SRGFGF+ Y
Sbjct: 3 ESESPKEPKQQRKLFIGGLSFETTDESLRSHSEQWGMLTDCAVMRDPNTKHSRGFGFVIY 62
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------- 140
+ + VD AM+ RPH++DGRVVE RAV RE R V K+ + + D
Sbjct: 63 ATVEEVDTAMNARPHKVDGRVVEPNRAVSREDSQRPDAHLTVKKIFVGGIKEDTEEHHLR 122
Query: 141 -YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YF QYG IE + ++T++ +G KRGFAF+ FDD+D +DK V+ K
Sbjct: 123 HYFEQYGKIEVIEIMTDQGSGKKRGFAFVTFDDHDSLDKTVIQK 166
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ + +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 78 KVDGRVVEPNRAVSR--EDSQRPDAHLTVKKIFVGGIKEDTEEHHLRHYFEQYGKIEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + +D+ + + H ++G E ++A+ +
Sbjct: 136 IMTDQGSGKKRGFAFVTFDDHDSLDKTVIQKYHTVNGHNCEVRKALSNQ 184
>gi|308465164|ref|XP_003094843.1| CRE-HRP-1 protein [Caenorhabditis remanei]
gi|308246407|gb|EFO90359.1| CRE-HRP-1 protein [Caenorhabditis remanei]
Length = 344
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 100/158 (63%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE+LRK+F+GGL T D+ ++ F+ Q+GEI D++VM+DP TKRSRGFGF+T++ V
Sbjct: 18 EPENLRKIFVGGLTSNTTDELMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTAKTEV 77
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIAL-----------EQM--DYFGQY 145
D AM RPH IDG+ V+ KRAVPR+ K R + V E M DYF +Y
Sbjct: 78 DAAMKQRPHVIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHNEDMLTDYFSKY 137
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G + ++ +K T RGF F+ FDD+D VD+ VL K
Sbjct: 138 GNVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 10 KLVPGLEVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWG 68
K P + TV P + +D SE S ++L++ G+ N+D L +F ++G
Sbjct: 82 KQRPHVIDGKTVDPKRAV---PRDDKNRSESNVSTKRLYVSGVREDHNEDMLTDYFSKYG 138
Query: 69 EIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR 128
+ ++ D T++ RGFGF+T+ + VD+ + + H ++G + ++ + ++
Sbjct: 139 NVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKD----E 194
Query: 129 VTKVQIALEQ 138
++K Q++ ++
Sbjct: 195 MSKAQMSRDR 204
>gi|444725879|gb|ELW66430.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 191
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 103/158 (65%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E L KLFI GL + T D+SL++ FEQWG + D +VM+DP TK SRGFGF+TY+ + V
Sbjct: 17 ELEQLWKLFIRGLSFETTDESLRSHFEQWGTLTDCMVMRDPNTKHSRGFGFVTYATVEEV 76
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D M RPHE+DGRVVE KR + RE R V ++ E+ DYF QY
Sbjct: 77 DATMKARPHEVDGRVVEPKRVISREDSQRPGAHLTMKKIFVGGIKEDTEEHHLRDYFEQY 136
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ +DD+D VDKIV+ K
Sbjct: 137 GKIEVIKIMTDRGSGKKRGFAFVIYDDHDSVDKIVIQK 174
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
EV G VV +I++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 86 EVDGRVVEPKRVISR--EDSQRPGAHLTMKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIK 143
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPR 122
+M D + + RGF F+ Y + VD+ + + H ++G E ++A+ +
Sbjct: 144 IMTDRGSGKKRGFAFVIYDDHDSVDKIVIQKYHTVNGHNCEVRKALSK 191
>gi|226472204|emb|CAX77138.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/156 (47%), Positives = 107/156 (68%), Gaps = 12/156 (7%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
S+ + +KLFIGGL +T+++SLK ++ QWGEI+DVVVMKDP +++SRGF F+TY ++
Sbjct: 8 SKADQDKKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGFVFVTYRDASS 67
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPRE-------VKVRRV----TKVQIALEQM-DYFGQY 145
VD A +NRPH +DG+ V+TKRA+PRE V+++ K + E + DYF Q+
Sbjct: 68 VDAAQNNRPHTVDGKEVDTKRAMPREETSPEVHAAVKKIFVGALKKDVTNEDLSDYFSQF 127
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
GT+ +V K+T RGFAF+ FDD D VDK++L
Sbjct: 128 GTVTDAQIVIAKDTNTSRGFAFVTFDDTDAVDKVIL 163
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Query: 30 KAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVD--VVVMKDPVTKRS 84
+AM + S PE +++K+F+G L ++ L +F Q+G + D +V+ KD T S
Sbjct: 88 RAMPREETS-PEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTDAQIVIAKD--TNTS 144
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGF F+T+ ++ VD+ + RPH I + ++A+ RE
Sbjct: 145 RGFAFVTFDDTDAVDKVILARPHTIKDSKADVRKALSRE 183
>gi|297278811|ref|XP_001114493.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Macaca
mulatta]
Length = 491
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/173 (46%), Positives = 111/173 (64%), Gaps = 16/173 (9%)
Query: 24 LAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKR 83
L II+K+ E E RKLFIGGL + T D+SL++ EQWG ++D VV++DP TKR
Sbjct: 118 LPAIISKS---ESPKELEQRRKLFIGGLSFETTDESLRSHCEQWGTLMDCVVLRDPNTKR 174
Query: 84 SRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--- 135
SRGFGF+TY+ + VD M+ RPH++DGR VETKRAV E R V KV +
Sbjct: 175 SRGFGFVTYATVQEVDAVMNARPHKVDGRAVETKRAVSGEDSQRPGGHLTVKKVFVGGIK 234
Query: 136 -----LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+DYF Q+G +E + ++T++ +G K GFAF+ FD++D +DKIV+ K
Sbjct: 235 EDTEEHHLIDYFQQFGKMEVIEIMTDRGSGKKSGFAFVTFDNHDSMDKIVIQK 287
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 33 EDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
EDSQ +++K+F+GG+ T + L +F+Q+G++ + +M D + + GF F+T
Sbjct: 214 EDSQRPGGHLTVKKVFVGGIKEDTEEHHLIDYFQQFGKMEVIEIMTDRGSGKKSGFAFVT 273
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ +D+ + + H ++ E ++A+ ++
Sbjct: 274 FDNHDSMDKIVIQKYHTVNSHNCEVRKALSKQ 305
>gi|296485782|tpg|DAA27897.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 360
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 117/181 (64%), Gaps = 21/181 (11%)
Query: 24 LAMIINKAMEDSQCSEP--------ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
+A +AME + S P E +RKLFIGGL T ++SLK +++QWGE+ D VV
Sbjct: 1 MAAASERAMEKTVKSVPVKREKKENEQIRKLFIGGLSSETTEESLKNYYQQWGELTDCVV 60
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE--------VKVR 127
++ +++SRGFGF+T+S VD AM+ RPH IDGRVV+ KRAV RE V V+
Sbjct: 61 IRGLASQKSRGFGFVTFSSVAEVDAAMAARPHSIDGRVVDPKRAVSREKSEKQGSLVNVK 120
Query: 128 R--VTKVQIALEQ---MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD 182
+ V ++ E+ +YF +YG I+++ ++T++++G KRGF F+ FDDYD VDKI+L
Sbjct: 121 KLFVGGIKEDTEEHHLREYFEKYGKIDAIEIITDRQSGKKRGFGFVTFDDYDPVDKIMLQ 180
Query: 183 K 183
K
Sbjct: 181 K 181
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVM 76
+ G VV +++ + Q S +++KLF+GG+ T + L+ +FE++G+I + ++
Sbjct: 94 IDGRVVDPKRAVSREKSEKQGSLV-NVKKLFVGGIKEDTEEHHLREYFEKYGKIDAIEII 152
Query: 77 KDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
D + + RGFGF+T+ + VD+ M + H I+G E +A+ R+
Sbjct: 153 TDRQSGKKRGFGFVTFDDYDPVDKIMLQKYHAINGHRAEVGKALSRQ 199
>gi|296207810|ref|XP_002750803.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 319
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 104/158 (65%), Gaps = 14/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + TN+ SL++ FEQW + D VVM+DP TK SRGFGF Y+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETNE-SLRSHFEQWEMLTDCVVMRDPNTKHSRGFGFFMYATVEEV 67
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQY 145
D AM+ RPH++D RVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 68 DAAMNARPHKVDRRVVEPKRAVSREDSQRPGAYLTVKKIFVGGIKEDTEEHHLRDYFEQY 127
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGF F+ F+D+D VDKIV+ K
Sbjct: 128 GQIEVIEIMTDRGSGKKRGFTFVTFNDHDSVDKIVIQK 165
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 31 AMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
+ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I + +M D + + RGF F
Sbjct: 90 SREDSQRPGAYLTVKKIFVGGIKEDTEEHHLRDYFEQYGQIEVIEIMTDRGSGKKRGFTF 149
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+T+++ VD+ + + H ++G E ++A+ ++
Sbjct: 150 VTFNDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 183
>gi|148664549|gb|EDK96965.1| mCG123153 [Mus musculus]
Length = 153
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 97/142 (68%), Gaps = 13/142 (9%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAF 167
G IE + ++T++ +G KRGFAF
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAF 150
>gi|109111364|ref|XP_001106881.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Macaca mulatta]
Length = 320
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 105/158 (66%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQW ++D VVM+DP K RGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETPDESLRSHFEQWRTLMDCVVMRDPNIKCCRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKV------QIALEQ--MDYFGQY 145
D AM+ RPH++DGR VE KRAV RE R V KV + A E DYF Q
Sbjct: 69 DAAMNARPHKVDGRGVEPKRAVSREDSQRPGAHSTVKKVFVGGIKEDAEEHHLRDYFEQR 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G K+GFAF+ FDD+D VDK ++ K
Sbjct: 129 GKIEVIEIMTDRGSGKKKGFAFVTFDDHDSVDKTIIQK 166
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 31 AMEDSQCSEPES-LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
+ EDSQ S ++K+F+GG+ + L+ +FEQ G+I + +M D + + +GF F
Sbjct: 91 SREDSQRPGAHSTVKKVFVGGIKEDAEEHHLRDYFEQRGKIEVIEIMTDRGSGKKKGFAF 150
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+T+ + VD+ + + H ++G E ++A ++
Sbjct: 151 VTFDDHDSVDKTIIQKYHTVNGHNCEVRKAPSKQ 184
>gi|49617279|gb|AAT67404.1| heterogeneous nuclear ribonucleoprotein A1 [Equus caballus]
Length = 152
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 101/147 (68%), Gaps = 13/147 (8%)
Query: 50 GLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEI 109
GL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + VD AM+ RPH++
Sbjct: 1 GLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKV 60
Query: 110 DGRVVETKRAVPRE----------VKVRRVTKVQIALEQM---DYFGQYGTIESVNMVTN 156
DGRVVE KRAV RE VK V ++ E+ DYF QYG IE + ++T+
Sbjct: 61 DGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTD 120
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 RGSGKKRGFAFVTFDDHDSVDKIVIQK 147
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 59 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 116
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEID 110
+M D + + RGF F+T+ + VD+ + + H ++
Sbjct: 117 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVN 152
>gi|149709520|ref|XP_001501077.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Equus caballus]
Length = 320
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 105/158 (66%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFI GL + T D+SL++ EQ + D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIRGLSFETTDESLRSHSEQRRTLTDCVVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE VK V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVLREDSQRLGAHLTVKKLFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G KRGFAF+ FDD+D VDK V+ K
Sbjct: 129 GKIEVIEIMTDRGSGKKRGFAFLTFDDHDSVDKSVIQK 166
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FEQ+G+I + +M D + + RGF F+T+ + VD++
Sbjct: 103 TVKKLFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFLTFDDHDSVDKS 162
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H ++G E ++A+ ++
Sbjct: 163 VIQKYHTVNGHNCEVRKALSKQ 184
>gi|355745323|gb|EHH49948.1| hypothetical protein EGM_00696, partial [Macaca fascicularis]
Length = 313
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 105/158 (66%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T D+SL++ EQWG ++D VV++DP TKRSRGFGF+TY+ + V
Sbjct: 9 ELEQRRKLFIGGLSFETTDESLRSHCEQWGTLMDCVVLRDPNTKRSRGFGFVTYATVQEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIA--------LEQMDYFGQY 145
D M+ RPH++DGR VETKRAV E R V KV + +DYF Q+
Sbjct: 69 DAVMNARPHKVDGRAVETKRAVSGEDSQRPGGHLTVKKVFVGGIKEDTEEHHLIDYFQQF 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G +E + ++T++ +G K GFAF+ FD++D +DKIV+ K
Sbjct: 129 GKMEVIEIMTDRGSGKKSGFAFVTFDNHDSMDKIVIQK 166
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 33 EDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
EDSQ +++K+F+GG+ T + L +F+Q+G++ + +M D + + GF F+T
Sbjct: 93 EDSQRPGGHLTVKKVFVGGIKEDTEEHHLIDYFQQFGKMEVIEIMTDRGSGKKSGFAFVT 152
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ +D+ + + H ++ E ++A+ ++
Sbjct: 153 FDNHDSMDKIVIQKYHTVNSHNCEVRKALSKQ 184
>gi|355753305|gb|EHH57351.1| hypothetical protein EGM_06957 [Macaca fascicularis]
Length = 320
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/158 (50%), Positives = 104/158 (65%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQW ++D VVM+DP K RGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETPDESLRSHFEQWRTLMDCVVMRDPNIKCCRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKV------QIALEQ--MDYFGQY 145
D AM+ RPH++DGR VE KRAV RE R V KV + A E DYF Q
Sbjct: 69 DAAMNARPHKVDGRGVEPKRAVSREDSQRPGAHSTVKKVFVGGIKEDAEEHHLRDYFEQR 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G K+GFAF+ FDD D VDK ++ K
Sbjct: 129 GKIEVIEIMTDRGSGKKKGFAFVTFDDNDSVDKTIIQK 166
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 31 AMEDSQCSEPES-LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
+ EDSQ S ++K+F+GG+ + L+ +FEQ G+I + +M D + + +GF F
Sbjct: 91 SREDSQRPGAHSTVKKVFVGGIKEDAEEHHLRDYFEQRGKIEVIEIMTDRGSGKKKGFAF 150
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+T+ ++ VD+ + + H ++G E ++A+ ++
Sbjct: 151 VTFDDNDSVDKTIIQKYHTVNGHNCEVRKALSKQ 184
>gi|341894622|gb|EGT50557.1| CBN-HRP-1 protein [Caenorhabditis brenneri]
Length = 343
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 100/158 (63%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE+LRK+F+GGL T D+ ++ F+ Q+GEI D++VM+DP TKRSRGFGF+T++ V
Sbjct: 18 EPENLRKIFVGGLTSNTTDELMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTGKTEV 77
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-----------LEQM--DYFGQY 145
D AM RPH IDG+ V+ KRAVPR+ K R + V E M +YF +Y
Sbjct: 78 DAAMKQRPHVIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFSKY 137
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G + ++ +K T RGF F+ FDD+D VD+ VL K
Sbjct: 138 GNVVKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 10 KLVPGLEVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWG 68
K P + TV P + +D SE S ++L++ G+ +D L +F ++G
Sbjct: 82 KQRPHVIDGKTVDPKRAV---PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFSKYG 138
Query: 69 EIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+V ++ D T++ RGFGF+T+ + VD+ + + H ++G + ++ + ++
Sbjct: 139 NVVKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKD 193
>gi|402897281|ref|XP_003911697.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 320
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 105/158 (66%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQW ++D VVM+DP K SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETPDESLRSQFEQWRTLMDCVVMRDPNIKCSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RP ++DGR VE KRAV RE R V +++ E+ DYF Q
Sbjct: 69 DAAMNARPQKVDGRGVEPKRAVSREDSQRPGAHSTVKKVFVGEIKEDAEEHHLRDYFEQC 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++T++ +G K+GFAF+ FDD+D VDK ++ K
Sbjct: 129 GKIEVIEIMTDRGSGKKKGFAFVTFDDHDSVDKTIIQK 166
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 31 AMEDSQCSEPES-LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
+ EDSQ S ++K+F+G + + L+ +FEQ G+I + +M D + + +GF F
Sbjct: 91 SREDSQRPGAHSTVKKVFVGEIKEDAEEHHLRDYFEQCGKIEVIEIMTDRGSGKKKGFAF 150
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 151 VTFDDHDSVDKTIIQKYHTVNGHNCEVRKALSKQ 184
>gi|119894797|ref|XP_580324.3| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Bos
taurus]
gi|297476672|ref|XP_002688896.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Bos
taurus]
gi|296485860|tpg|DAA27975.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 372
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 110/181 (60%), Gaps = 21/181 (11%)
Query: 24 LAMIINKAMEDSQCSEP--------ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
+A +A +++ S+P E RKLF+GGL T +++L ++ QWG + D VV
Sbjct: 1 MAQATKRAEKETSTSDPSERNKRDNEKFRKLFVGGLSSETTEETLWNYYRQWGYLTDCVV 60
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VK 125
++DP ++ SR F F+T+S VD AM+ RPH IDG+ V KRAVPRE VK
Sbjct: 61 IRDPASQTSRRFAFVTFSSMAEVDAAMAARPHSIDGKRVAPKRAVPREDYGIPGALVTVK 120
Query: 126 VRRVTKVQIALEQ---MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD 182
V K+ E+ DYFG+YG I ++ +++++E+G KRGF F+ FDD+D VDK+VL
Sbjct: 121 KLFVCKIGEDTEKHHLRDYFGKYGKINAIEIISDRESGRKRGFGFVTFDDHDPVDKLVLQ 180
Query: 183 K 183
K
Sbjct: 181 K 181
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 48/81 (59%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+ + T L+ +F ++G+I + ++ D + R RGFGF+T+ + VD+
Sbjct: 118 TVKKLFVCKIGEDTEKHHLRDYFGKYGKINAIEIISDRESGRKRGFGFVTFDDHDPVDKL 177
Query: 102 MSNRPHEIDGRVVETKRAVPR 122
+ + H I+G E ++A+ R
Sbjct: 178 VLQKYHTINGHHAEVRKALSR 198
>gi|345792219|ref|XP_864182.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Canis lupus familiaris]
Length = 321
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/175 (46%), Positives = 108/175 (61%), Gaps = 21/175 (12%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE L KLFI GL +T D+SL++ EQ G ++D VVM+DP TK SRGFGF TY+ + V
Sbjct: 9 EPEQLWKLFIKGLSSKTTDESLRSHCEQQGALMDCVVMRDPNTKHSRGFGFTTYATREDV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIALEQMD---------YFGQ 144
D M+ RPH++DGRVVE KRAV RE R V K+ + + D +F Q
Sbjct: 69 DAVMNARPHKMDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLKDYFFEQ 128
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGEDH 199
Y IE + ++T++ +G KRGFAF+ FDD+D VDKIV+ K +NG DH
Sbjct: 129 YEKIEVIEIMTDRGSGKKRGFAFVTFDDHDFVDKIVIQKC-------HPVNGHDH 176
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 31 AMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKA-FFEQWGEIVDVVVMKDPVTKRSRGFG 88
+ EDSQ +++K+F+GG+ T + LK FFEQ+ +I + +M D + + RGF
Sbjct: 91 SREDSQRPGAHLTVKKIFVGGIKEDTEEHHLKDYFFEQYEKIEVIEIMTDRGSGKKRGFA 150
Query: 89 FITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 151 FVTFDDHDFVDKIVIQKCHPVNGHDHEVRKALSKQ 185
>gi|440910144|gb|ELR59970.1| hypothetical protein M91_04889, partial [Bos grunniens mutus]
Length = 359
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 111/185 (60%), Gaps = 21/185 (11%)
Query: 24 LAMIINKAMEDSQCSEP--------ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
+A ++ +++ S+P E RKLF+GGL T +++L ++ QWG + D VV
Sbjct: 3 MAQATKRSKKETSTSDPSERNKRDNEKFRKLFVGGLSSETTEETLWNYYRQWGYLTDCVV 62
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VK 125
++DP ++ SR F F+T+S VD AM+ RPH IDG+ V KRAVPRE VK
Sbjct: 63 IRDPASQTSRRFAFVTFSSMAEVDAAMAARPHSIDGKRVAPKRAVPREDYGIPGALVTVK 122
Query: 126 VRRVTKVQIALEQ---MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD 182
V K+ E+ DYFG+YG I ++ +++++E+G KRGF F+ FDD+D VDK+VL
Sbjct: 123 KLFVCKIGEDTEKHHLRDYFGKYGKINAIEIISDRESGRKRGFGFVTFDDHDPVDKLVLQ 182
Query: 183 KVVVL 187
K +
Sbjct: 183 KYHTI 187
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 48/81 (59%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+ + T L+ +F ++G+I + ++ D + R RGFGF+T+ + VD+
Sbjct: 120 TVKKLFVCKIGEDTEKHHLRDYFGKYGKINAIEIISDRESGRKRGFGFVTFDDHDPVDKL 179
Query: 102 MSNRPHEIDGRVVETKRAVPR 122
+ + H I+G E ++A+ R
Sbjct: 180 VLQKYHTINGHHAEVRKALSR 200
>gi|332837971|ref|XP_001142796.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 4 [Pan troglodytes]
Length = 326
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 105/162 (64%), Gaps = 13/162 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EP+ LRKLFIGGL + T+D+SL++ EQWG + + VVM+DP T RSRGFGF+ Y+ + V
Sbjct: 9 EPKQLRKLFIGGLRFETSDESLRSHSEQWGTLTECVVMRDPNTNRSRGFGFVPYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++ GRVVE K AV RE R V ++ E+ DY+ QY
Sbjct: 69 DAAMNARPHKMGGRVVEPKTAVSREDSQRPGAYLTVKKIFVGGIKEDTEEHPLRDYYEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
G E + ++T++ +G KR FAF+ FD++D DKIV+ K ++
Sbjct: 129 GNTEVIEIMTDQGSGKKRDFAFVTFDNHDSTDKIVIQKYHIV 170
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVD 72
++ G VV +++ EDSQ P + ++K+F+GG+ T + L+ ++EQ+G
Sbjct: 78 KMGGRVVEPKTAVSR--EDSQ--RPGAYLTVKKIFVGGIKEDTEEHPLRDYYEQYGNTEV 133
Query: 73 VVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ +M D + + R F F+T+ D+ + + H ++G E ++A+ ++
Sbjct: 134 IEIMTDQGSGKKRDFAFVTFDNHDSTDKIVIQKYHIVNGHNCEVRKALSKQ 184
>gi|426230606|ref|XP_004009357.1| PREDICTED: uncharacterized protein LOC101121854 [Ovis aries]
Length = 477
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 102/156 (65%), Gaps = 13/156 (8%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E RKLF+GGL T +++L +++QWG + D VV++DP ++ SR FGF+T+S VD
Sbjct: 18 EEFRKLFVGGLSSETTEETLWNYYQQWGYLTDCVVIRDPASQTSRRFGFVTFSSVAEVDA 77
Query: 101 AMSNRPHEIDGRVVETKRAVPRE--------VKVRRVTKVQIALEQ-----MDYFGQYGT 147
AM+ RPH IDG+ V KRAVPRE V V+++ +I + DYF +YG
Sbjct: 78 AMAARPHSIDGKRVTPKRAVPREDYGKPGALVTVKKLFVCRIGEDTEKHHLRDYFEKYGN 137
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
I ++ +++++E+G KRGF F+ FDD+D VDK+VL K
Sbjct: 138 INAIEIISDRESGRKRGFGFVTFDDHDPVDKLVLQK 173
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+ + T L+ +FE++G I + ++ D + R RGFGF+T+ + VD+
Sbjct: 110 TVKKLFVCRIGEDTEKHHLRDYFEKYGNINAIEIISDRESGRKRGFGFVTFDDHDPVDKL 169
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 170 VLQKYHTINGYHAEVRKALSRQ 191
>gi|324514790|gb|ADY45988.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 319
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 90/132 (68%), Gaps = 13/132 (9%)
Query: 63 FFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPR 122
F+ +WGE++D +VMKDP TKRSRGFGF++Y++ MVDEAM+NRPH +DG+ V+ KRAVPR
Sbjct: 15 FYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVDEAMANRPHIVDGKTVDPKRAVPR 74
Query: 123 EVKVRRVTKV-----------QIALEQM--DYFGQYGTIESVNMVTNKETGAKRGFAFIE 169
+ R V + EQM +YFG++GT+ ++ +K TG RGFAFI
Sbjct: 75 DASQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDKNTGKPRGFAFIT 134
Query: 170 FDDYDVVDKIVL 181
FDDYD VDK VL
Sbjct: 135 FDDYDPVDKCVL 146
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 13 PGLEVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIV 71
P + TV P + A SQ +E S ++L++ G+ + L+ +F ++G ++
Sbjct: 58 PHIVDGKTVDPKRAVPRDA---SQRTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVI 114
Query: 72 DVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
++ D T + RGF FIT+ + VD+ + + H+I + K+A+ +E
Sbjct: 115 KAEIINDKNTGKPRGFAFITFDDYDPVDKCVLLKSHQISNFRCDVKKALSKE 166
>gi|13436308|gb|AAH04945.1| Unknown (protein for IMAGE:3615335), partial [Homo sapiens]
Length = 298
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 98/144 (68%), Gaps = 13/144 (9%)
Query: 53 YRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGR 112
+ T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + VD AM+ RPH++DGR
Sbjct: 1 FETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGR 60
Query: 113 VVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQYGTIESVNMVTNKET 159
VVE KRAV RE R V ++ E+ DYF QYG IE + ++T++ +
Sbjct: 61 VVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGS 120
Query: 160 GAKRGFAFIEFDDYDVVDKIVLDK 183
G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 121 GKKRGFAFVTFDDHDSVDKIVIQK 144
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 56 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 113
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 114 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 162
>gi|397467692|ref|XP_003805542.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan paniscus]
Length = 326
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 105/162 (64%), Gaps = 13/162 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EP+ LRKLFIGGL + T+D+SL++ EQWG + + VVM+DP T RSRGFGF+ Y+ + V
Sbjct: 9 EPKQLRKLFIGGLRFETSDESLRSHSEQWGTLTECVVMRDPNTNRSRGFGFVPYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++ GRVVE K AV RE R V ++ E+ DY+ QY
Sbjct: 69 DAAMNARPHKMGGRVVEPKTAVSREDSQRPGAYLTVKKIFVGGIKEDTEEHPLRDYYEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
G E + ++T++ +G KR FAF+ FD++D DKIV+ K ++
Sbjct: 129 GKTEVIEIMTDQGSGKKRDFAFVTFDNHDSTDKIVIQKYHIV 170
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVD 72
++ G VV +++ EDSQ P + ++K+F+GG+ T + L+ ++EQ+G+
Sbjct: 78 KMGGRVVEPKTAVSR--EDSQ--RPGAYLTVKKIFVGGIKEDTEEHPLRDYYEQYGKTEV 133
Query: 73 VVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ +M D + + R F F+T+ D+ + + H ++G E ++A+ ++
Sbjct: 134 IEIMTDQGSGKKRDFAFVTFDNHDSTDKIVIQKYHIVNGHNCEVRKALSKQ 184
>gi|426254057|ref|XP_004020702.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Ovis aries]
Length = 325
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/156 (44%), Positives = 102/156 (65%), Gaps = 13/156 (8%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E RKLF+GGL T +++L +++QWG + D VV++DP ++ SR FGF+T+S VD
Sbjct: 18 EEFRKLFVGGLSSETTEETLWNYYQQWGYLTDCVVIRDPASQTSRRFGFVTFSSVAEVDA 77
Query: 101 AMSNRPHEIDGRVVETKRAVPRE--------VKVRRVTKVQIALEQ-----MDYFGQYGT 147
AM+ RPH IDG+ V KRAVPRE V V+++ +I + DYF +YG
Sbjct: 78 AMAARPHSIDGKRVTPKRAVPREDYGKPGALVTVKKLFVCRIGEDTEKHHLRDYFEKYGN 137
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
I ++ +V+++E+G KRGF F+ FDD+D VDK+VL K
Sbjct: 138 INAIEIVSDRESGRKRGFGFVTFDDHDPVDKLVLQK 173
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+ + T L+ +FE++G I + ++ D + R RGFGF+T+ + VD+
Sbjct: 110 TVKKLFVCRIGEDTEKHHLRDYFEKYGNINAIEIVSDRESGRKRGFGFVTFDDHDPVDKL 169
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 170 VLQKYHTINGYHAEVRKALSRQ 191
>gi|268553541|ref|XP_002634757.1| C. briggsae CBR-HRP-1 protein [Caenorhabditis briggsae]
Length = 337
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 101/158 (63%), Gaps = 15/158 (9%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE+LRK+F+GGL T DD ++ F+ Q+GEI D++VM+DP TKRSRGFGF+T++ V
Sbjct: 10 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTAKTEV 69
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-----------LEQM--DYFGQY 145
D AM +PH IDG+ V+ KRAVPR+ K R + V E+M DYF +Y
Sbjct: 70 DAAM-KQPHVIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEEMLSDYFSKY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
GT+ ++ +K T RGF F+ DD+D VD+ VL K
Sbjct: 129 GTVTKSEIILDKATQKPRGFGFVT-DDHDCVDQCVLQK 165
>gi|426370462|ref|XP_004052183.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Gorilla gorilla gorilla]
Length = 326
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 105/162 (64%), Gaps = 13/162 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EP+ LRKLFIGGL + T+D+SL++ EQWG + + VVM DP T RSRGFGF+T + + V
Sbjct: 9 EPKQLRKLFIGGLRFETSDESLRSHSEQWGTLTECVVMSDPNTNRSRGFGFVTCATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++ GRVVE K AV RE R V+ ++ E+ DY+ QY
Sbjct: 69 DAAMNARPHKVGGRVVEPKVAVSREDSQRPGAYLTVKKIFVSGIKEDTEEHPLRDYYEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
G E + ++T++ +G KR FAF+ FD++D DKIV+ K ++
Sbjct: 129 GKTEVIEIMTDQGSGKKRDFAFVTFDNHDSTDKIVIQKYHIV 170
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVD 72
+V G VV + +++ EDSQ P + ++K+F+ G+ T + L+ ++EQ+G+
Sbjct: 78 KVGGRVVEPKVAVSR--EDSQ--RPGAYLTVKKIFVSGIKEDTEEHPLRDYYEQYGKTEV 133
Query: 73 VVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ +M D + + R F F+T+ D+ + + H ++G E ++A+ ++
Sbjct: 134 IEIMTDQGSGKKRDFAFVTFDNHDSTDKIVIQKYHIVNGHNCEVRKALSKK 184
>gi|296192610|ref|XP_002744138.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 335
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 75/154 (48%), Positives = 102/154 (66%), Gaps = 13/154 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
LRKLF GGL + T D+SL++ FEQWG + D VVM++P TKRSRGFGF+TY+ + VD A+
Sbjct: 28 LRKLFTGGLSFETTDESLRSHFEQWGTLKDGVVMRNPNTKRSRGFGFVTYATVEEVDAAI 87
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQYGTIE 149
+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QYG IE
Sbjct: 88 NARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIE 147
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+ ++ ++ +G KRGFAF ++D +DKIV+ K
Sbjct: 148 VIEIMMDRGSGKKRGFAFAISANHDSMDKIVIQK 181
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 93 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 150
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAV 120
+M D + + RGF F + +D+ + + H ++G E ++A+
Sbjct: 151 IMMDRGSGKKRGFAFAISANHDSMDKIVIQKYHTVNGHNCEVRKAL 196
>gi|410971274|ref|XP_003992095.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2-like [Felis catus]
Length = 325
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 101/159 (63%), Gaps = 16/159 (10%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE L +F+GGL + T ++SL++ FEQW + D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLWXIFMGGLSFETTNESLRSHFEQWATLTDCVVMRDPNTKHSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM--------------DYFGQ 144
D AMS RPH++DGRVV +RAV R R +A++++ DYF
Sbjct: 69 DAAMSARPHKVDGRVVVPQRAVSRGDSQR--PGAHLAVKKVFVGGIXDTKEHHLRDYFEH 126
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YG +E + ++T+ +G KRGF F+ FDD+D V KIV+ K
Sbjct: 127 YGKMEVIEIMTDXGSGRKRGFTFVTFDDHDSVHKIVIQK 165
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + L+ +FE +G++ + +M D + R RGF F+T+ + V +
Sbjct: 103 AVKKVFVGGIX-DTKEHHLRDYFEHYGKMEVIEIMTDXGSGRKRGFTFVTFDDHDSVHKI 161
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H ++ E ++A+P++
Sbjct: 162 VIQKYHTVNDHNCEVRKALPKQ 183
>gi|297690158|ref|XP_002822492.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pongo abelii]
Length = 320
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 103/162 (63%), Gaps = 13/162 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRK FI GL + T+D+SL++ EQWG + D VVM+DP T RSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKPFIRGLRFETSDESLRSHSEQWGMLTDCVVMRDPNTNRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D M+ RPH++ GRVVE K AV RE R V ++ E+ DYF QY
Sbjct: 69 DTVMNARPHKVGGRVVEPKTAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHPLRDYFEQY 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
G E + ++T++ +G K+ FAFI FD++D DKIV+ K ++
Sbjct: 129 GKTEVIEIMTDQGSGKKKDFAFITFDNHDSTDKIVIQKYHIV 170
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+ +
Sbjct: 78 KVGGRVVEPKTAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHPLRDYFEQYGKTEVIE 135
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + + F FIT+ D+ + + H ++GR E ++A+ ++
Sbjct: 136 IMTDQGSGKKKDFAFITFDNHDSTDKIVIQKYHIVNGRNCEVRKALSKQ 184
>gi|395849370|ref|XP_003797301.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Otolemur garnettii]
Length = 316
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 104/158 (65%), Gaps = 14/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E LRKLFIGGL + + SL++ EQWG + D VVM+DP TKRSRGF F+TY + V
Sbjct: 9 ELEQLRKLFIGGLSFEMME-SLRSHSEQWGMLTDCVVMRDPNTKRSRGFRFVTYVTVEEV 67
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIALEQMD--------YFGQY 145
D A++ RPH++DGRVVE KRAV RE RR V K + + D YF QY
Sbjct: 68 DAAVNARPHKVDGRVVEPKRAVSREDSQRRDAHLTVKKFFVGGIKEDTEEHHLRAYFEQY 127
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G +E + ++T++++G KRGFAF+ FDD+D VD IV+ K
Sbjct: 128 GKMEVIEIMTDQDSGKKRGFAFVTFDDHDSVDNIVIQK 165
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ + +++K F+GG+ T + L+A+FEQ+G++ +
Sbjct: 77 KVDGRVVEPKRAVSR--EDSQRRDAHLTVKKFFVGGIKEDTEEHHLRAYFEQYGKMEVIE 134
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD + + ++ E ++A+ ++
Sbjct: 135 IMTDQDSGKKRGFAFVTFDDHDSVDNIVIQKYDTVNCHNCEVRKALSKQ 183
>gi|198420439|ref|XP_002131647.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 442
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 105/163 (64%), Gaps = 13/163 (7%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
+EPE RKLFIGGL + T ++SL A+F ++GE+ D VVM DP TK+SRGFGF+T+ KM
Sbjct: 15 NEPEQQRKLFIGGLSFDTTNESLSAYFTKFGEVTDSVVMMDPKTKKSRGFGFVTFKRIKM 74
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA------LEQM--DYFGQ 144
VD MS RPH++DGR V KRAV RE + V K+ + EQ D+F +
Sbjct: 75 VDAVMSERPHKLDGRTVTPKRAVSREDSEKPGAHATVKKIFVGGIKDDTTEQHLKDHFRK 134
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+G +E V ++ ++ET KRGFAF+ F D+D VDKIV K +
Sbjct: 135 FGIVELVEVMEDRETRKKRGFAFVTFADHDPVDKIVSQKYHTI 177
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 53/81 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + LK F ++G + V VM+D T++ RGF F+T+++ VD+
Sbjct: 110 TVKKIFVGGIKDDTTEQHLKDHFRKFGIVELVEVMEDRETRKKRGFAFVTFADHDPVDKI 169
Query: 102 MSNRPHEIDGRVVETKRAVPR 122
+S + H I+G E ++A+P+
Sbjct: 170 VSQKYHTINGHNCEVRKALPK 190
>gi|402911238|ref|XP_003918244.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Papio
anubis]
Length = 321
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 102/159 (64%), Gaps = 14/159 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EP RKLFIG L + T ++SL++ FEQWG ++D VVM+ P TK SR FGF Y+ + V
Sbjct: 9 EPNRQRKLFIGVLSFETTNESLRSHFEQWGTLLDGVVMRVPNTKHSRVFGFFAYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ----MDYFGQ 144
D AM+ RPH++DGRVV KRAV RE R V ++ E+ +DYF Q
Sbjct: 69 DAAMNARPHKVDGRVVGPKRAVSREDSQRPGAHLTVKNIFVGGIKEDTEEHHHLIDYFEQ 128
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YG IE ++T++ +G KRGFAF+ FDD+D VDK+V+ K
Sbjct: 129 YGKIEVTEIMTDRGSGKKRGFAFVTFDDHDSVDKLVVQK 167
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDS-LKAFFEQWGEIVDV 73
+V G VV +++ EDSQ +++ +F+GG+ T + L +FEQ+G+I
Sbjct: 78 KVDGRVVGPKRAVSR--EDSQRPGAHLTVKNIFVGGIKEDTEEHHHLIDYFEQYGKIEVT 135
Query: 74 VVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++ + ++
Sbjct: 136 EIMTDRGSGKKRGFAFVTFDDHDSVDKLVVQKYHAVNGHNCEVRKVLSKQ 185
>gi|355705101|gb|EHH31026.1| Heterogeneous nuclear ribonucleoprotein A1-like 2 [Macaca mulatta]
Length = 300
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 102/159 (64%), Gaps = 14/159 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EP RKLFIG L + T ++SL++ FEQWG ++D VVM+ P TK SR FGF Y+ + V
Sbjct: 9 EPNRQRKLFIGVLSFETTNESLRSHFEQWGTLLDGVVMRVPNTKHSRVFGFFAYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ----MDYFGQ 144
D AM+ RPH++DGRVVE KRAV E R V ++ E+ +DYF Q
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSVENSQRPGAHLTVKNIFVGGIKEDTEEHHHLIDYFEQ 128
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YG IE ++T++ +G KRGFAF+ FDD+D VDK+V+ K
Sbjct: 129 YGKIEVTEIMTDRGSGKKRGFAFVTFDDHDSVDKLVVQK 167
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 31 AMEDSQCSEPE-SLRKLFIGGLDYRTNDDS-LKAFFEQWGEIVDVVVMKDPVTKRSRGFG 88
++E+SQ +++ +F+GG+ T + L +FEQ+G+I +M D + + RGF
Sbjct: 91 SVENSQRPGAHLTVKNIFVGGIKEDTEEHHHLIDYFEQYGKIEVTEIMTDRGSGKKRGFA 150
Query: 89 FITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
F+T+ + VD+ + + H ++G E ++ + ++
Sbjct: 151 FVTFDDHDSVDKLVVQKYHAVNGHNCEVRKVLSKQ 185
>gi|311248536|ref|XP_003123190.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 354
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 100/158 (63%), Gaps = 15/158 (9%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL T ++SL+ +++QWG++ D VV++DP ++RSRGFGF+ +S V
Sbjct: 16 ESEQFRKLFIGGLCSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFSSVAEV 75
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVK-------------VRRVTKVQIALEQMDYFGQY 145
D AM+ RPH IDGRVV +KR VPRE V + + DYF +Y
Sbjct: 76 DAAMAARPHSIDGRVVASKRVVPREESGKPGACVTTKKLFVGGIKEDTTERHLRDYFERY 135
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
GTI+++ ++ +++G K F F+ FDD+D VDKIVL K
Sbjct: 136 GTIDAIEII--RQSGRKTAFGFVTFDDHDPVDKIVLQK 171
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+ +KLF+GG+ T + L+ +FE++G I + +++ + R FGF+T+ + VD+
Sbjct: 110 TTKKLFVGGIKEDTTERHLRDYFERYGTIDAIEIIRQ--SGRKTAFGFVTFDDHDPVDKI 167
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G + ++A+ R+
Sbjct: 168 VLQKYHTINGHHAQLEKALSRQ 189
>gi|311248526|ref|XP_003123185.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 354
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 102/158 (64%), Gaps = 15/158 (9%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL T ++SL+ +++QWG++ D VV++DP ++RSRGFGF+ +S V
Sbjct: 16 ESEQFRKLFIGGLCSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFSSVAEV 75
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE--------VKVRR-----VTKVQIALEQMDYFGQY 145
D AM+ RPH IDGRVV +KR VPRE V ++ + + DYF +Y
Sbjct: 76 DAAMAARPHSIDGRVVASKRVVPREESGKPGACVTTKKLFVGGIKEDTTERHLRDYFERY 135
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
GTI+++ ++ +++G K F F+ FDD+D VDKIVL K
Sbjct: 136 GTIDAIEII--RQSGRKTAFGFVTFDDHDPVDKIVLQK 171
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+ +KLF+GG+ T + L+ +FE++G I + +++ + R FGF+T+ + VD+
Sbjct: 110 TTKKLFVGGIKEDTTERHLRDYFERYGTIDAIEIIRQ--SGRKTAFGFVTFDDHDPVDKI 167
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G + ++A+ R+
Sbjct: 168 VLQKYHTINGHHAQLEKALSRQ 189
>gi|444725708|gb|ELW66264.1| 60S ribosomal protein L7a [Tupaia chinensis]
Length = 536
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 98/149 (65%), Gaps = 13/149 (8%)
Query: 48 IGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPH 107
+G + SL++ FEQWG + D +VM+DP +KRSRGFGF+TY+ + VD AM+ RPH
Sbjct: 256 VGNIPPEWEGKSLRSHFEQWGTLTDCMVMRDPNSKRSRGFGFVTYATVEEVDAAMNARPH 315
Query: 108 EIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQYGTIESVNMV 154
++DGRVVE KRAV RE VK V ++ E+ DYF QY IE + ++
Sbjct: 316 KVDGRVVEPKRAVSREDSQRLGAYLTVKKIFVGGIKEGTEEHHLRDYFEQYDKIEVIEIM 375
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
T++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 376 TDRDSGKKRGFAFVAFDDHDSVDKIVIQK 404
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 49/82 (59%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + L+ +FEQ+ +I + +M D + + RGF F+ + + VD+
Sbjct: 341 TVKKIFVGGIKEGTEEHHLRDYFEQYDKIEVIEIMTDRDSGKKRGFAFVAFDDHDSVDKI 400
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H ++G E ++ + ++
Sbjct: 401 VIQKYHTVNGHNCEVRKVLSKQ 422
>gi|34194032|gb|AAH56530.1| Hnrpa0 protein, partial [Danio rerio]
Length = 303
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 106/161 (65%), Gaps = 13/161 (8%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
Q SE E L KLF+GGL+ +T +D L+++FEQ+G + D VV+++ +RSR FGF+TYS S
Sbjct: 12 QMSEMEKLCKLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTS 71
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPRE--------VKVRR--VTKVQIALEQMD---YF 142
+ D AM+ RPH +DG+ VE KRAV RE KV++ V ++ +E+ D +F
Sbjct: 72 EEADAAMAARPHVVDGKNVEVKRAVAREDAGRPEALAKVKKIFVGGLKDDIEEKDLTEFF 131
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
Q+G IE ++T+K+TG KRGF F+ F+D D DK V+ K
Sbjct: 132 SQFGMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVVLK 172
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 28 INKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ +A+ PE+L +K+F+GGL + L FF Q+G I V+ D T +
Sbjct: 92 VKRAVAREDAGRPEALAKVKKIFVGGLKDDIEEKDLTEFFSQFGMIEKSEVITDKDTGKK 151
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGFGF+ + ++ D+A+ + H I+G VE K+A+ ++
Sbjct: 152 RGFGFVHFEDNDSADKAVVLKFHMINGHKVEVKKALTKQ 190
>gi|403277845|ref|XP_003930556.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 295
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 104/161 (64%), Gaps = 16/161 (9%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI---TYSES 95
EPE LR LFIGGL + T +SL+++FEQWG + D +VM+DP TKRS GFG TY+
Sbjct: 9 EPEQLRMLFIGGLSFETTKESLRSYFEQWGTLTDCMVMRDPNTKRSGGFGGFGFHTYAAV 68
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQI------ALEQ--MDYF 142
+ VD AM+ RPH++DGRVVE KRAV RE R V K+ + A E DYF
Sbjct: 69 EKVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAYLTVKKILVGGIKEDAEEHHLRDYF 128
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
QYG E + ++ ++ +G KRGFAF+ FDD+D V+K V+ K
Sbjct: 129 EQYGKTEVIEIMADRGSGKKRGFAFVTFDDHDSVNKTVIQK 169
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVD 72
+V G VV +++ EDSQ P + ++K+ +GG+ + L+ +FEQ+G+
Sbjct: 81 KVDGRVVEPKRAVSR--EDSQ--RPGAYLTVKKILVGGIKEDAEEHHLRDYFEQYGKTEV 136
Query: 73 VVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ +M D + + RGF F+T+ + V++ + + H ++G E ++A+ ++
Sbjct: 137 IEIMADRGSGKKRGFAFVTFDDHDSVNKTVIQKYHTVNGHNCEVRKALSKQ 187
>gi|395862544|ref|XP_003803504.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Otolemur garnettii]
Length = 172
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 91/135 (67%), Gaps = 13/135 (9%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKETG 160
G IE + ++T++ +G
Sbjct: 129 GKIEVIEIMTDRGSG 143
>gi|444729715|gb|ELW70122.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 323
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 100/162 (61%), Gaps = 13/162 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E KLFIG L + T + SLK+++EQWG++ D VVM+ P +KRSRGFGF+T+S
Sbjct: 26 EKEQFCKLFIGDLSFETTEVSLKSYYEQWGKLTDCVVMRVPASKRSRGFGFVTFSSMAEA 85
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ-------MDYFGQY 145
D AM+ RP IDGRV+E K AV RE + V + +E+ DYF +Y
Sbjct: 86 DAAMTTRPQSIDGRVIEPKCAVAREESGKPGAHVTVKKLFIGGIEEDTEEHHLRDYFEEY 145
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
I++ ++T++++G KR F F+ FDD+D VDKIVL + +
Sbjct: 146 RKIDTTKIITDRQSGKKRSFDFVTFDDHDPVDKIVLQEYCTM 187
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 48/84 (57%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLFIGG++ T + L+ +FE++ +I ++ D + + R F F+T+ + VD+
Sbjct: 120 TVKKLFIGGIEEDTEEHHLRDYFEEYRKIDTTKIITDRQSGKKRSFDFVTFDDHDPVDKI 179
Query: 102 MSNRPHEIDGRVVETKRAVPREVK 125
+ ++G E ++ + R+ +
Sbjct: 180 VLQEYCTMNGHNAEVRKTLSRQTR 203
>gi|296490076|tpg|DAA32189.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 361
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 112/199 (56%), Gaps = 16/199 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E KLFIG L T ++SL ++ QWG + D V+++DP +++SR FGFIT+S +
Sbjct: 16 ENEQFCKLFIGDLSSETTEESLWNYYRQWGYLTDCVLIRDPASQKSRRFGFITFSSMAEL 75
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE--------VKVRR-----VTKVQIALEQMDYFGQY 145
D AM+ RPH IDG++V KRAVPRE + V++ +T+ DYF +Y
Sbjct: 76 DAAMAARPHFIDGKMVMPKRAVPREDHGKLGALITVKKLFVGGITEDMKEHHLRDYFEKY 135
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVIN---GEDHRTH 202
G I ++ +VT+ ++G KRGF FI FDD+D VDKIVL K + + + R
Sbjct: 136 GKINAIEIVTDGQSGKKRGFGFITFDDHDPVDKIVLQKNHTINGHRAEVRKALSRQERQE 195
Query: 203 GTHQEAKVDGVTTTNQTHG 221
G H ++ +G HG
Sbjct: 196 GQHLRSRGEGDVGLGYFHG 214
>gi|355745396|gb|EHH50021.1| hypothetical protein EGM_00780, partial [Macaca fascicularis]
Length = 263
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 100/160 (62%), Gaps = 17/160 (10%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE L+KLFIG L + D+SL+ E WG + D V +DP TK SRGFGF+TY+ + V
Sbjct: 6 EPEQLQKLFIGRLGFEITDESLRKHSEPWGILKDYVERRDPKTKSSRGFGFVTYATVEEV 65
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM---------------DYFG 143
D AM+ RPH++DGRVVE KRAV RE R + ++A++++ DY
Sbjct: 66 DAAMNARPHKLDGRVVEPKRAVSREDSQR--SGARLAVKKIFVGGIKEDTEEHHLRDYSE 123
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
QYG E ++T++ + KRGFAFI FDD+D VDK V+ K
Sbjct: 124 QYGKTEVTEIMTDRGSVKKRGFAFIPFDDHDFVDKTVIQK 163
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 31 AMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
+ EDSQ S +++K+F+GG+ T + L+ + EQ+G+ +M D + + RGF F
Sbjct: 88 SREDSQRSGARLAVKKIFVGGIKEDTEEHHLRDYSEQYGKTEVTEIMTDRGSVKKRGFAF 147
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV 124
I + + VD+ + + H ++G E ++A+ +E+
Sbjct: 148 IPFDDHDFVDKTVIQKFHTVNGHNCEVRKALKQEM 182
>gi|351695197|gb|EHA98115.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Heterocephalus
glaber]
Length = 282
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 91/153 (59%), Gaps = 27/153 (17%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
A E + E E RKLFIGGL++ T ++SL+ +++QWG++ D VV++DP +KRSRG GF+
Sbjct: 15 ATESTMEREKEQFRKLFIGGLNFETTEESLRNYYKQWGKLTDCVVLRDPASKRSRGSGFV 74
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMDYFGQYGTIES 150
T+S VD AM+ RPH IDGRVVE KRAV RE + T V +
Sbjct: 75 TFSSMGEVDAAMAARPHSIDGRVVEPKRAVAREESGKSGTHVTV---------------- 118
Query: 151 VNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
K+GF F+ FDD+D VDKIVL K
Sbjct: 119 -----------KKGFGFVTFDDHDPVDKIVLQK 140
>gi|47550715|ref|NP_999871.1| heterogeneous nuclear ribonucleoprotein A0b [Danio rerio]
gi|42542945|gb|AAH66434.1| Heterogeneous nuclear ribonucleoprotein A0 [Danio rerio]
Length = 314
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 104/157 (66%), Gaps = 13/157 (8%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
SE E L KLF+GGL+ +T +D L+++FEQ+G + D VV+++ +RSR FGF+TYS S+
Sbjct: 2 SEMEKLCKLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTSEE 61
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPRE--------VKVRR--VTKVQIALEQMD---YFGQ 144
D AM+ RPH +DG+ VE KRAV RE KV++ V ++ +E+ D +F Q
Sbjct: 62 ADAAMAARPHVVDGKNVEVKRAVAREDAGRPEALAKVKKIFVGGLKDDIEEKDLTEFFSQ 121
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
+G IE ++T+K+TG KRGF F+ F+D D DK V+
Sbjct: 122 FGMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVV 158
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 28 INKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ +A+ PE+L +K+F+GGL + L FF Q+G I V+ D T +
Sbjct: 80 VKRAVAREDAGRPEALAKVKKIFVGGLKDDIEEKDLTEFFSQFGMIEKSEVITDKDTGKK 139
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGFGF+ + ++ D+A+ + H I+G VE K+A+ ++
Sbjct: 140 RGFGFVHFEDNDSADKAVVLKFHMINGHKVEVKKALTKQ 178
>gi|344251072|gb|EGW07176.1| Heterogeneous nuclear ribonucleoprotein A3 [Cricetulus griseus]
Length = 175
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 101/168 (60%), Gaps = 17/168 (10%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRK FIGGL + DD L+ F +WG + D VVM+D K +GFGF+T
Sbjct: 1 MEGHDPKEPEQLRKPFIGGLGFEATDDCLREHFVKWGTLTDCVVMRDSPNKMFQGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM------------ 139
YS + VD A+ + HE+DG VVETKR + RE V+ +A+++M
Sbjct: 61 YSCVEEVDAAVCAQSHEVDGHVVETKRTISREDSVK--PGACLAVKKMFVGGIREDTEEY 118
Query: 140 ---DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKV 184
DYF +YG IE++ ++ ++++ KRGFA + FDD+D VDKIV+ K
Sbjct: 119 NLRDYFEKYGKIETIEVMEDRQSRKKRGFARVTFDDHDTVDKIVVQKC 166
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
EV G VV I++ EDS + +++K+F+GG+ T + +L+ +FE++G+I +
Sbjct: 77 EVDGHVVETKRTISR--EDSVKPGACLAVKKMFVGGIREDTEEYNLRDYFEKYGKIETIE 134
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVE 115
VM+D +++ RGF +T+ + VD+ + + H I+G V+
Sbjct: 135 VMEDRQSRKKRGFARVTFDDHDTVDKIVVQKCHTINGHNVK 175
>gi|345316006|ref|XP_001514052.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Ornithorhynchus anatinus]
Length = 280
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 88/134 (65%), Gaps = 13/134 (9%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM+ RPH++DGRVVE KRAV RE R V ++ E+ DYF QY
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQY 128
Query: 146 GTIESVNMVTNKET 159
G IES + +E+
Sbjct: 129 GKIESKQSLAGEES 142
>gi|444723753|gb|ELW64388.1| Heterogeneous nuclear ribonucleoprotein A3 [Tupaia chinensis]
Length = 348
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 100/158 (63%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D SL+ FE+WG + ++ P K SRGFGF+TY + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDGSLREHFEKWGHTHRLCGIERPPNKTSRGFGFMTYLCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQY 145
D AM R H++DG VVE +RAV +E V+ V ++ +E+ DYF ++
Sbjct: 90 DAAMFARSHKVDGCVVEPRRAVSKEDSVKPGACLTVKKIFVGGIKEDIEEYNLRDYFEKF 149
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE++ + ++++G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 150 GKIETIEVTKDRQSGKKRGFAFVTFDDHDTVDKIVVQK 187
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 61/107 (57%), Gaps = 7/107 (6%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ + +L+ +FE++G+I + V KD + + RGF F+T+ + VD+
Sbjct: 124 TVKKIFVGGIKEDIEEYNLRDYFEKFGKIETIEVTKDRQSGKKRGFAFVTFDDHDTVDKI 183
Query: 102 MSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMDYFGQYGTI 148
+ + H I+G + K+A+ ++ ++Q A Q + G+ G
Sbjct: 184 VVQKYHTINGHNCDVKKALSKQ-------EMQSAGSQRGHGGRSGNF 223
>gi|440897852|gb|ELR49462.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Bos
grunniens mutus]
Length = 349
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 115/201 (57%), Gaps = 20/201 (9%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E KLFIG L T ++SL ++ QWG + D V+++DP +++SR FGFIT+S +
Sbjct: 15 ENEQFCKLFIGDLSSETTEESLWNYYRQWGYLTDCVLIRDPASQKSRRFGFITFSSMAEL 74
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE--------VKVRR-----VTKVQIALEQMDYFGQY 145
D AM+ RPH IDG++V KRAVPRE + V++ +T+ DYF +Y
Sbjct: 75 DAAMAARPHFIDGKMVMPKRAVPREDHGKLGALITVKKLFVGGITEDMKEHHLRDYFEKY 134
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL-----EVDQEVINGEDHR 200
G I ++ +VT+ ++G KRGF FI F+D+D VDKIVL K + EV + + E R
Sbjct: 135 GKINAIEIVTDGQSGKKRGFGFITFEDHDPVDKIVLQKNHTINGHHAEVRKALSRQE--R 192
Query: 201 THGTHQEAKVDGVTTTNQTHG 221
G H ++ +G HG
Sbjct: 193 QEGQHLRSRGEGDVGLGYFHG 213
>gi|12845960|dbj|BAB26973.1| unnamed protein product [Mus musculus]
Length = 139
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 89/139 (64%), Gaps = 13/139 (9%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LEQ 138
YS + VD AM RPH++DGRVVE KRAV RE V+ V K+ +
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNL 120
Query: 139 MDYFGQYGTIESVNMVTNK 157
DYF +YG IE++ ++ ++
Sbjct: 121 RDYFEKYGKIETIEVMEDR 139
>gi|351702148|gb|EHB05067.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 181
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 98/158 (62%), Gaps = 16/158 (10%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE L KLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 27 EPEQLSKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 86
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQI--------ALEQMDYFGQY 145
+ AM PH++DG VVE KR V RE V+ V K+ + A D F +Y
Sbjct: 87 ETAMCTLPHKVDGDVVEPKRTVSREDSVKPGAHLTVKKICVSGIKEDTEAYNLRDDFEKY 146
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G IE + ++ ++++G K FA DD D +DKIV+ K
Sbjct: 147 GKIEIIEVMEDRQSGKKSEFA---SDDCDTLDKIVVQK 181
>gi|112180524|gb|AAH50513.2| Hnrpa0l protein [Danio rerio]
Length = 302
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 98/152 (64%), Gaps = 13/152 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLF+GGL+ +T D+ L+A FEQ+G++ D VV+ + +RSR FGF+TYS ++ D AM
Sbjct: 5 LCKLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPLQRSRCFGFVTYSSTEEADAAM 64
Query: 103 SNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGTIE 149
S RPH +DG V+ KRAV RE KV+++ K I E + DYF Q+G IE
Sbjct: 65 SARPHIVDGNNVDLKRAVAREDAGKPEMLAKVKKIFVGGLKDDIEDEHLQDYFSQFGPIE 124
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
++T+K+TG KRGF F+ FDD D DK V+
Sbjct: 125 KAQVITDKDTGKKRGFGFVYFDDNDSADKAVV 156
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDV 73
V G V L + A ED+ +PE L +K+F+GGL D+ L+ +F Q+G I
Sbjct: 71 VDGNNVDLKRAV--AREDA--GKPEMLAKVKKIFVGGLKDDIEDEHLQDYFSQFGPIEKA 126
Query: 74 VVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
V+ D T + RGFGF+ + ++ D+A+ + H I G VE K+A+ ++
Sbjct: 127 QVITDKDTGKKRGFGFVYFDDNDSADKAVVMKFHSICGHKVEVKKALTKQ 176
>gi|392350253|ref|XP_003750604.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like [Rattus norvegicus]
Length = 302
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 103/166 (62%), Gaps = 14/166 (8%)
Query: 32 MEDSQCS-EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
M S+ S EPE L KL I ++ +++L+ FEQWG + D VVM+DP +KRSR +GF+
Sbjct: 1 MYKSESSKEPEQLWKLSIRERSFKATNENLRNHFEQWGTLTDCVVMRDPNSKRSRVWGFV 60
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LE 137
TY+ K VD AMS + H++DGR VE KRAV REV R+ V K+ +
Sbjct: 61 TYATVKEVDAAMSAKTHKVDGRAVEPKRAVSREVSQRQGVHLTVKKIFVGGIKEDTAEYH 120
Query: 138 QMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF QYG IE + ++T++ + KRGFAF+ D +D +DKIV+ K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSEKKRGFAFVTSDGHDXMDKIVIRK 166
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 49/79 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + L+ +FEQ+G+I + +M D +++ RGF F+T +D+
Sbjct: 103 TVKKIFVGGIKEDTAEYHLRDYFEQYGKIEVIEIMTDRGSEKKRGFAFVTSDGHDXMDKI 162
Query: 102 MSNRPHEIDGRVVETKRAV 120
+ + H ++G E ++AV
Sbjct: 163 VIRKYHTVNGHNCEVRKAV 181
>gi|392342164|ref|XP_003754522.1| PREDICTED: LOW QUALITY PROTEIN: putative heterogeneous nuclear
ribonucleoprotein A1-like 3-like [Rattus norvegicus]
Length = 352
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 103/166 (62%), Gaps = 14/166 (8%)
Query: 32 MEDSQCS-EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
M S+ S EPE L KL I ++ +++L+ FEQWG + D VVM+DP +KRSR +GF+
Sbjct: 1 MYKSESSKEPEQLWKLSIRERSFKATNENLRNHFEQWGTLTDCVVMRDPNSKRSRVWGFV 60
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VTKVQIA--------LE 137
TY+ K VD AMS + H++DGR VE KRAV REV R+ V K+ +
Sbjct: 61 TYATVKEVDAAMSAKTHKVDGRAVEPKRAVSREVSQRQGVHLTVKKIFVGGIKEDTAEYH 120
Query: 138 QMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
DYF QYG IE + ++T++ + KRGFAF+ D +D +DKIV+ K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSEKKRGFAFVTSDGHDXMDKIVIRK 166
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 49/79 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + L+ +FEQ+G+I + +M D +++ RGF F+T +D+
Sbjct: 103 TVKKIFVGGIKEDTAEYHLRDYFEQYGKIEVIEIMTDRGSEKKRGFAFVTSDGHDXMDKI 162
Query: 102 MSNRPHEIDGRVVETKRAV 120
+ + H ++G E ++AV
Sbjct: 163 VIRKYHTVNGHNCEVRKAV 181
>gi|198431578|ref|XP_002128542.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 334
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 95/160 (59%), Gaps = 13/160 (8%)
Query: 37 CSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESK 96
+E E LRKLFIGG+ Y T D+S+ +F ++G+I D VV+KD T RS+GFGF+T+
Sbjct: 6 ATEEEQLRKLFIGGISYETTDESMNDYFSKYGKIEDCVVIKDSSTGRSKGFGFVTFETEA 65
Query: 97 MVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA-------------LEQMDYFG 143
D M +RPH ++ R ++ KRAV RE V+ Q+ +YFG
Sbjct: 66 EADACMDDRPHTLNSRQIDVKRAVSREESVKPGAHFQVKKIFIGGLKDGCDETNLKEYFG 125
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
Q+GTIE+ + +++ RGFAFI F+D+D VDK+V +
Sbjct: 126 QFGTIETFELPLERDSEKPRGFAFITFEDHDTVDKLVAKR 165
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 54/91 (59%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
++K+FIGGL ++ +LK +F Q+G I + + +++ RGF FIT+ + VD+ +
Sbjct: 103 VKKIFIGGLKDGCDETNLKEYFGQFGTIETFELPLERDSEKPRGFAFITFEDHDTVDKLV 162
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRRVTKVQ 133
+ R H ++G E K+A+ + + T+V+
Sbjct: 163 AKRHHYVNGVRCEVKKALSKAEMEKAKTQVE 193
>gi|441642329|ref|XP_004090435.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2-like [Nomascus leucogenys]
Length = 503
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 96/157 (61%), Gaps = 13/157 (8%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P+ +LF G L + D+ L++ EQ G + VVM+DP TKRSRGFGF+TY+ + VD
Sbjct: 197 PKEPEQLFTGRLSFEMTDERLRSRSEQRGTLTGCVVMRDPNTKRSRGFGFVTYATVEEVD 256
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQM---DYFGQYG 146
AM+ RPH++DGR VE KRAV RE R V ++ E+ DYF QYG
Sbjct: 257 AAMNARPHKVDGRAVEPKRAVSREGSQRPGACLTMEKVFVAGIKEDTEEHHLRDYFEQYG 316
Query: 147 TIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
IE + ++T+ +G K+GFAFI F D D +DKIV+ K
Sbjct: 317 KIEVIKIMTDXGSGKKKGFAFISFGDDDSMDKIVIQK 353
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 50/82 (60%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
++ K+F+ G+ T + L+ +FEQ+G+I + +M D + + +GF FI++ + +D+
Sbjct: 290 TMEKVFVAGIKEDTEEHHLRDYFEQYGKIEVIKIMTDXGSGKKKGFAFISFGDDDSMDKI 349
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H +G E ++A+P++
Sbjct: 350 VIQKYHRENGHNCEVRKALPKQ 371
>gi|209155482|gb|ACI33973.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
gi|223647890|gb|ACN10703.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 279
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 96/152 (63%), Gaps = 13/152 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLFIGGL+ T D L+ FEQ+G++ D VV+++ +RSR FGF+TY+ + D AM
Sbjct: 5 LCKLFIGGLNVHTTDGGLRKHFEQYGQLTDCVVVQNQQLQRSRCFGFVTYATADEADAAM 64
Query: 103 SNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGTIE 149
S RPH +DG VE KRAV RE KV+++ K I E + +YF Q+GTIE
Sbjct: 65 SARPHALDGNNVELKRAVAREDAGKPEALAKVKKIFIGGLKEDIEDEHLSEYFSQFGTIE 124
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
++++ +TG KRGF F+ F+DYD DK V+
Sbjct: 125 KAEVISDNQTGKKRGFGFVYFEDYDSADKAVV 156
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 28 INKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ +A+ +PE+L +K+FIGGL D+ L +F Q+G I V+ D T +
Sbjct: 78 LKRAVAREDAGKPEALAKVKKIFIGGLKEDIEDEHLSEYFSQFGTIEKAEVISDNQTGKK 137
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGFGF+ + + D+A+ + H I+G VE K+A+ ++
Sbjct: 138 RGFGFVYFEDYDSADKAVVLKFHHINGHKVEVKKALTKQ 176
>gi|346467163|gb|AEO33426.1| hypothetical protein [Amblyomma maculatum]
Length = 287
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 103/164 (62%), Gaps = 18/164 (10%)
Query: 34 DSQCSEPESLR-------KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
DSQ + P S K+FIGGL ++T + L+ +F ++G+I +V+VMKDP T+RSRG
Sbjct: 34 DSQPTNPASPTEAAHDPGKMFIGGLSWQTAPEGLREYFSKFGDITEVMVMKDPSTRRSRG 93
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IAL 136
FGF+T+S+ VD+ ++N PHE+DG+ ++ K A P+ + VT+ + L
Sbjct: 94 FGFVTFSDPASVDKVLANGPHELDGKKIDPKIAFPKRAHPKMVTRTKKVFVGGLSAPTTL 153
Query: 137 EQM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
E + +YF Q+G IE ++ +K+T RGF F+ F++ DVVDK+
Sbjct: 154 EDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFENEDVVDKV 197
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G I D ++M D T R RGFGF+T+ +VD+
Sbjct: 140 KKVFVGGLSAPTTLEDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFENEDVVDKVCE 199
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 200 IHFHEINNKMVECKKAQPKEV 220
>gi|40850963|gb|AAH65334.1| Hnrpa0l protein, partial [Danio rerio]
Length = 299
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 97/152 (63%), Gaps = 13/152 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLF+GGL+ +T D+ L+A FEQ+G++ D VV+ + +RSR FGF+TYS + D AM
Sbjct: 2 LCKLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPLQRSRCFGFVTYSSIEEADAAM 61
Query: 103 SNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGTIE 149
S RPH +DG V+ KRAV RE KV+++ K I E + DYF Q+G IE
Sbjct: 62 SARPHIVDGNNVDLKRAVAREDAGKPEMLAKVKKIFVGGLKDDIEDEHLQDYFSQFGPIE 121
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
++T+K+TG KRGF F+ FDD D DK V+
Sbjct: 122 KAQVITDKDTGKKRGFGFVYFDDNDSADKAVV 153
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDV 73
V G V L + A ED+ +PE L +K+F+GGL D+ L+ +F Q+G I
Sbjct: 68 VDGNNVDLKRAV--AREDA--GKPEMLAKVKKIFVGGLKDDIEDEHLQDYFSQFGPIEKA 123
Query: 74 VVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
V+ D T + RGFGF+ + ++ D+A+ + H I G VE K+A+ ++
Sbjct: 124 QVITDKDTGKKRGFGFVYFDDNDSADKAVVMKFHSICGHKVEVKKALTKQ 173
>gi|109102812|ref|XP_001104065.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Macaca mulatta]
Length = 258
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 99/158 (62%), Gaps = 13/158 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EP+ LRKLF GGL + T D+S+++ EQWG ++D VVM+DP TK SR F F+TY+ + V
Sbjct: 9 EPQQLRKLFSGGLRFETTDESVRSHCEQWGMLMDCVVMRDPNTKCSRSFEFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM---DYFGQY 145
D A++ RPH++DGRV+E KR V RE VK V + E+ DYF Q+
Sbjct: 69 DAAINARPHKVDGRVMEPKRPVSREDYERSGAHLTVKKIFVGGINEDTEEHHLRDYFEQF 128
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I+ ++T++ + KR F F+ FDD+D DK V+ K
Sbjct: 129 GKIKMTEIMTDQGSDKKRDFDFVTFDDHDSRDKTVIKK 166
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 11/129 (8%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG++ T + L+ +FEQ+G+I +M D + + R F F+T+ + D+
Sbjct: 103 TVKKIFVGGINEDTEEHHLRDYFEQFGKIKMTEIMTDQGSDKKRDFDFVTFDDHDSRDKT 162
Query: 102 MSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMDYFGQYGTIESVNMVTNKETGA 161
+ + H ++G E ++A+ + R + V A E T +N+ +K
Sbjct: 163 VIKKYHAVNGHNCEVRKALSK----REMASVHPAKEDF-------TSLIINIDVSKPGQN 211
Query: 162 KRGFAFIEF 170
+ G + EF
Sbjct: 212 QHGLSLEEF 220
>gi|432112552|gb|ELK35268.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 168
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 58/87 (66%), Positives = 71/87 (81%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 68 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 127
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVK 125
D AM+ RPH++DGRVVE KRAV REV+
Sbjct: 128 DAAMNARPHKVDGRVVEPKRAVSREVR 154
>gi|47086749|ref|NP_997810.1| heterogeneous nuclear ribonucleoprotein A0 [Danio rerio]
gi|44890516|gb|AAH66672.1| Zgc:77366 [Danio rerio]
Length = 305
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 95/152 (62%), Gaps = 13/152 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLF+GGL+ +T DD L+ FEQ+G++ D VV+++ KRSR FGF+TYS D AM
Sbjct: 9 LCKLFVGGLNVQTTDDGLRNHFEQYGKLTDCVVVQNQQLKRSRCFGFVTYSSPDEADSAM 68
Query: 103 SNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGTIE 149
S RPH +DG VE KRAV RE KV+++ K I + + D F Q+G +E
Sbjct: 69 SARPHILDGNNVELKRAVAREDAGKPEALAKVKKIFIGGLKDDIEEDHLRDCFSQFGAVE 128
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
++T+KETG KRGF F+ F+D D DK V+
Sbjct: 129 KAEVITDKETGKKRGFGFVYFEDNDSADKAVV 160
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 28 INKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ +A+ +PE+L +K+FIGGL +D L+ F Q+G + V+ D T +
Sbjct: 82 LKRAVAREDAGKPEALAKVKKIFIGGLKDDIEEDHLRDCFSQFGAVEKAEVITDKETGKK 141
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGFGF+ + ++ D+A+ + H I+G VE K+A+ ++
Sbjct: 142 RGFGFVYFEDNDSADKAVVLKFHMINGHKVEVKKALTKQ 180
>gi|432876616|ref|XP_004073061.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 95/154 (61%), Gaps = 13/154 (8%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ L KLF+GGL+ T+DD L+ FEQ+G + D VV+ + +RSR FGF+TYS + D
Sbjct: 3 DQLCKLFVGGLNVDTDDDGLRKHFEQFGTLTDCVVVVNKQLQRSRCFGFVTYSTPEEADA 62
Query: 101 AMSNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGT 147
AM+ RPH +DG VE KRAV RE KV+++ K I + + DYF QYG
Sbjct: 63 AMAARPHTVDGNAVEVKRAVAREDANRPEALAKVKKIFVGGLKDDIEEDHLTDYFSQYGE 122
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
+E +++ KETG KRGF F+ F D+D DK V+
Sbjct: 123 VEKSEVISEKETGKKRGFGFVYFTDHDSADKAVV 156
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 20 TVVPLAMIINKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVM 76
TV A+ + +A+ + PE+L +K+F+GGL +D L +F Q+GE+ V+
Sbjct: 70 TVDGNAVEVKRAVAREDANRPEALAKVKKIFVGGLKDDIEEDHLTDYFSQYGEVEKSEVI 129
Query: 77 KDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ T + RGFGF+ +++ D+A+ + H ++G VE K+A+ ++
Sbjct: 130 SEKETGKKRGFGFVYFTDHDSADKAVVVKFHTVNGHKVEVKKALTKQ 176
>gi|148695242|gb|EDL27189.1| mCG1305, isoform CRA_c [Mus musculus]
Length = 144
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 75/108 (69%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM 139
YS + VD AM RPH++DGRVVE KRAV RE RV + + E M
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDMETRVVDMVVEEEAM 108
>gi|198452963|ref|XP_002137572.1| GA26466 [Drosophila pseudoobscura pseudoobscura]
gi|198132154|gb|EDY68130.1| GA26466 [Drosophila pseudoobscura pseudoobscura]
Length = 354
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 106/178 (59%), Gaps = 16/178 (8%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
M +S E LRK+FIGGL +T ++L+ FF ++G + D VVM+DPV+ SRGFGF+T
Sbjct: 1 MANSAIQNDEHLRKIFIGGLPTQTTPETLREFFSKFGAVADAVVMRDPVSNHSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPR-----EVKVRRVTKVQIAL--------EQ 138
+ + V+ S RPH ID + VETK A+PR + +I L E
Sbjct: 61 FVDPGSVENVQSTRPHIIDCKTVETKPALPRLEFNKPPGMGNGQTNKIFLGGLKDCHDEP 120
Query: 139 M--DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDK-IVLDKVVVLEVDQEV 193
M DYF ++GT+ SV ++ +KETG KRGF F+EF+D D ++ +VL K V+ + EV
Sbjct: 121 MIRDYFSKFGTVMSVKVLIDKETGRKRGFGFLEFEDIDSAERALVLSKHVINFIAVEV 178
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL ++ ++ +F ++G ++ V V+ D T R RGFGF+ + + + A+
Sbjct: 107 KIFLGGLKDCHDEPMIRDYFSKFGTVMSVKVLIDKETGRKRGFGFLEFEDIDSAERALVL 166
Query: 105 RPHEIDGRVVETKRAVPREVKVRRV 129
H I+ VE K++ R +R+
Sbjct: 167 SKHVINFIAVEVKKSTQRPDPGKRL 191
>gi|348511912|ref|XP_003443487.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Oreochromis niloticus]
Length = 301
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 95/154 (61%), Gaps = 13/154 (8%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ L KLF+GGL+ T+DD L+ FEQ+G + D VV+ + +RSR FGF+TYS + D
Sbjct: 3 DQLCKLFVGGLNVDTDDDGLRKHFEQYGTLTDCVVVVNKQLQRSRCFGFVTYSTPEEADA 62
Query: 101 AMSNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGT 147
AM+ RPH +DG VE KRAV RE KV+++ K I + + +YF QYG
Sbjct: 63 AMAARPHTVDGNAVEVKRAVAREDANKPEALAKVKKIFVGGLKDDIEEQHLTEYFSQYGQ 122
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
+E +++ KETG KRGF F+ F D+D DK V+
Sbjct: 123 VEKSEVISEKETGKKRGFGFVYFTDHDAADKAVV 156
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 20 TVVPLAMIINKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVM 76
TV A+ + +A+ ++PE+L +K+F+GGL + L +F Q+G++ V+
Sbjct: 70 TVDGNAVEVKRAVAREDANKPEALAKVKKIFVGGLKDDIEEQHLTEYFSQYGQVEKSEVI 129
Query: 77 KDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ T + RGFGF+ +++ D+A+ + H + G VE K+A+ ++
Sbjct: 130 SEKETGKKRGFGFVYFTDHDAADKAVVVKFHTVKGHKVEVKKALTKQ 176
>gi|189241054|ref|XP_968171.2| PREDICTED: similar to CG32169 CG32169-PA [Tribolium castaneum]
Length = 525
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 95/151 (62%), Gaps = 11/151 (7%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P K+FIGGL ++T+ +SL+ +F ++G+I +V+VMKDP T+RSRGFGFIT+++ VD
Sbjct: 118 PNDPGKMFIGGLSWQTSPESLREYFSKYGDITEVMVMKDPATRRSRGFGFITFTDPASVD 177
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM-DYFGQYGTI 148
+ ++ HE+DG+ ++ K A PR + VT+ + LE + YF Q+G I
Sbjct: 178 KVLAQGTHELDGKKIDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPI 237
Query: 149 ESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
E ++ +K+T RGF F+ F DVVDK+
Sbjct: 238 EDAMLMFDKQTNRHRGFGFVTFQSEDVVDKV 268
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K++FEQ+G I D ++M D T R RGFGF+T+ +VD+
Sbjct: 211 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 270
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 271 IHFHEINNKMVECKKAQPKEV 291
>gi|321461997|gb|EFX73024.1| hypothetical protein DAPPUDRAFT_32116 [Daphnia pulex]
Length = 185
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 99/147 (67%), Gaps = 11/147 (7%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
RK+FIGGL ++T+ + L+ +F ++G++ +V+VMKDP T+RSRGFGF+T++++ VD+ ++
Sbjct: 2 RKMFIGGLSWQTSAEGLREYFSKFGDVTEVMVMKDPTTRRSRGFGFVTFADAASVDKVLA 61
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTKVQ-------IALEQMD----YFGQYGTIESVN 152
+ PHE+DG+ ++ K A PR + VT+ + A +D YF Q+G +E
Sbjct: 62 SAPHELDGKKIDPKVAFPRRAHPKMVTRTKKIFVGGLSAPSTVDDVKGYFEQFGRVEDAM 121
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKI 179
++ +K+T RGFAF+ F+ DVVDK+
Sbjct: 122 LMFDKQTNRHRGFAFVTFESEDVVDKV 148
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 52/81 (64%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL + D +K +FEQ+G + D ++M D T R RGF F+T+ +VD+
Sbjct: 91 KKIFVGGLSAPSTVDDVKGYFEQFGRVEDAMLMFDKQTNRHRGFAFVTFESEDVVDKVCE 150
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 151 IHFHEINNKMVECKKAQPKEV 171
>gi|195144344|ref|XP_002013156.1| GL23972 [Drosophila persimilis]
gi|194102099|gb|EDW24142.1| GL23972 [Drosophila persimilis]
Length = 351
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 110/183 (60%), Gaps = 18/183 (9%)
Query: 28 INKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGF 87
+ + M +S E LRK+FIGGL +T ++L+ FF ++G + D VVM+DPV+ SRGF
Sbjct: 59 VTENMANSAIQNDEHLRKIFIGGLPTQTTPETLREFFSKFGAVADAVVMRDPVSNHSRGF 118
Query: 88 GFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKV------QIAL----- 136
GF+T+ + V+ S RPH ID + VETK A+PR ++ + + +I L
Sbjct: 119 GFVTFVDPGSVENVQSTRPHIIDCKTVETKPALPR-LEFNKPPGMGNGQTNKIFLGGLKD 177
Query: 137 ---EQM--DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDK-IVLDKVVVLEVD 190
E M DYF ++GT+ SV ++ +KETG KRGF F+EF D D ++ +VL K V+ +
Sbjct: 178 CHDEPMIRDYFSKFGTVMSVKVLIDKETGRKRGFGFLEFGDIDSAERALVLSKHVINFIT 237
Query: 191 QEV 193
EV
Sbjct: 238 VEV 240
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL ++ ++ +F ++G ++ V V+ D T R RGFGF+ + + + A+
Sbjct: 169 KIFLGGLKDCHDEPMIRDYFSKFGTVMSVKVLIDKETGRKRGFGFLEFGDIDSAERALVL 228
Query: 105 RPHEIDGRVVETKRAVPR 122
H I+ VE K++ R
Sbjct: 229 SKHVINFITVEVKKSTQR 246
>gi|149022306|gb|EDL79200.1| rCG27231, isoform CRA_b [Rattus norvegicus]
gi|149022307|gb|EDL79201.1| rCG27231, isoform CRA_b [Rattus norvegicus]
gi|149022308|gb|EDL79202.1| rCG27231, isoform CRA_b [Rattus norvegicus]
gi|149022309|gb|EDL79203.1| rCG27231, isoform CRA_b [Rattus norvegicus]
Length = 144
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/108 (58%), Positives = 75/108 (69%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM 139
YS + VD AM RPH++DGRVVE KRAV RE +V + + E M
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDMETKVVDMVVEEEDM 108
>gi|405960558|gb|EKC26474.1| RNA-binding protein Musashi-like protein Rbp6 [Crassostrea gigas]
Length = 281
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 122/214 (57%), Gaps = 20/214 (9%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P K+FIGGL ++T +SLK F ++GEI + +VMKDP TKRSRGFGF+TY + VD
Sbjct: 21 PNDPGKMFIGGLSWQTTVESLKDHFGRFGEIKEAMVMKDPTTKRSRGFGFVTYKDPASVD 80
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM-DYFGQYGTI 148
+ N PH +D + V+ K A PR+ + + VT+ + +E + +YF QYG I
Sbjct: 81 TCLENGPHILDNKTVDPKVAFPRKAQPKMVTRTKKIFVGGLSAATTVEDVKNYFSQYGKI 140
Query: 149 ESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGEDHRTHGTHQEA 208
E ++ +K T RGF F+ F++ DVVDK+ ++ E++++++ + Q
Sbjct: 141 EDAMLMFDKTTNRHRGFGFVTFENEDVVDKVC--EIHFHEINKKMVECKK------AQPK 192
Query: 209 KVDGVTTTNQTHGTI-REVVGMDNSKVVAGEIKE 241
+V TT + GT+ R ++ ++V GEI +
Sbjct: 193 EVMLPTTLARGRGTLTRGAYVTEDGEIVLGEIPQ 226
>gi|345494041|ref|XP_001606007.2| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Nasonia
vitripennis]
Length = 367
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 97/156 (62%), Gaps = 11/156 (7%)
Query: 35 SQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSE 94
S P K+FIGGL ++T+ +SL+ +F ++G+I +V+VMKDP T+RSRGFGFIT+++
Sbjct: 13 SPAEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFAD 72
Query: 95 SKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM-DYFG 143
VD+ ++ HE+DG+ ++ K A PR + VT+ + LE + +YF
Sbjct: 73 PASVDKVLAQGTHELDGKKIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPTTLEDVKNYFE 132
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
Q+G IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 133 QFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKV 168
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G I D ++M D T R RGFGF+T+ +VD+
Sbjct: 111 KKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 170
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 171 IHFHEINNKMVECKKAQPKEV 191
>gi|380014686|ref|XP_003691353.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Apis
florea]
Length = 410
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 97/156 (62%), Gaps = 11/156 (7%)
Query: 35 SQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSE 94
S P K+FIGGL ++T+ +SL+ +F ++G+I +V+VMKDP T+RSRGFGFIT+++
Sbjct: 13 SPAEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFAD 72
Query: 95 SKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM-DYFG 143
VD+ ++ HE+DG+ ++ K A PR + VT+ + LE + +YF
Sbjct: 73 PASVDKVLAQGNHELDGKKIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPTTLEDVKNYFE 132
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
Q+G IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 133 QFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKV 168
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G I D ++M D T R RGFGF+T+ +VD+
Sbjct: 111 KKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 170
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 171 IHFHEINNKMVECKKAQPKEV 191
>gi|350398654|ref|XP_003485263.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Bombus
impatiens]
Length = 410
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 97/156 (62%), Gaps = 11/156 (7%)
Query: 35 SQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSE 94
S P K+FIGGL ++T+ +SL+ +F ++G+I +V+VMKDP T+RSRGFGFIT+++
Sbjct: 13 SPAEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFAD 72
Query: 95 SKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM-DYFG 143
VD+ ++ HE+DG+ ++ K A PR + VT+ + LE + +YF
Sbjct: 73 PASVDKVLAQGNHELDGKKIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPTTLEDVKNYFE 132
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
Q+G IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 133 QFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKV 168
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G I D ++M D T R RGFGF+T+ +VD+
Sbjct: 111 KKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 170
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 171 IHFHEINNKMVECKKAQPKEV 191
>gi|387018106|gb|AFJ51171.1| Heterogeneous nuclear ribonucleoprotein A0 [Crotalus adamanteus]
Length = 307
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 99/165 (60%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T + L+ +FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTTEAGLREYFEAYGTLTDCVVVLNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VVE KRAV RE R +V K+ + + D
Sbjct: 55 YSAVEEADAAMAASPHAVDGNVVELKRAVSREDSARPGAHAKVKKLFVGGLKGDLGENDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+G +E +++NK++G KRGF F+ F ++D DK + K
Sbjct: 115 VEHFSQFGPVEKAEIISNKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G VV L +++ EDS + ++KLF+GGL ++ L F Q+G + +
Sbjct: 72 VDGNVVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDLGENDLVEHFSQFGPVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ + + + RGFGF+ + D+A + H I G VE K+AVPRE
Sbjct: 130 ISNKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPRE 177
>gi|161084519|ref|NP_001097631.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
gi|158028569|gb|ABW08559.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
Length = 499
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 97/161 (60%), Gaps = 14/161 (8%)
Query: 33 EDSQCSE---PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
E CS P K+FIGGL ++T+ +SL+ +F ++G+I + +VMKDP T+RSRGFGF
Sbjct: 15 ELGPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGF 74
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM 139
+T+S+ VD+ ++ HE+DG+ V+ K A PR + VT+ + LE +
Sbjct: 75 VTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDV 134
Query: 140 -DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
YF Q+G IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 135 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKV 175
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K++FEQ+G I D ++M D T R RGFGF+T+ +VD+
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 178 IHFHEINNKMVECKKAQPKEV 198
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
DYFG+YG I ++ + T RGF F+ F D + VDK++
Sbjct: 47 DYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVL 87
>gi|195451838|ref|XP_002073097.1| GK13335 [Drosophila willistoni]
gi|194169182|gb|EDW84083.1| GK13335 [Drosophila willistoni]
Length = 415
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 94/157 (59%), Gaps = 16/157 (10%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E LRK+FIGGL +T ++L+ +F Q+GE+VD VVM+DPV+ SRGF F+TY + V+
Sbjct: 39 EHLRKIFIGGLSTQTTVETLRQYFRQFGEMVDAVVMRDPVSNHSRGFAFVTYLSPESVEN 98
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVR------RVTKVQIALEQM----------DYFGQ 144
RPH ID + VETKRA+PR R + +I L + +YF Q
Sbjct: 99 VQRARPHTIDNKDVETKRALPRMEFTRSSAGQSNIRSAKIFLGGLRDCHSEESIREYFSQ 158
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
+G + SV ++ +KETG KRGF F+EF D D+ ++
Sbjct: 159 FGIVTSVKLLLDKETGRKRGFGFLEFKDLASADRALV 195
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL +++S++ +F Q+G + V ++ D T R RGFGF+ + + D A+
Sbjct: 137 KIFLGGLRDCHSEESIREYFSQFGIVTSVKLLLDKETGRKRGFGFLEFKDLASADRALVQ 196
Query: 105 RPHEIDGRVVETKRA 119
H I+ +VE K++
Sbjct: 197 SKHSINYSLVEVKKS 211
>gi|344257880|gb|EGW13984.1| Heterogeneous nuclear ribonucleoprotein A3 [Cricetulus griseus]
Length = 122
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 71/96 (73%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+T
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETADDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR 127
YS + VD AM RPH++DGRVVE KRAV RE V+
Sbjct: 61 YSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVK 96
>gi|241710586|ref|XP_002412054.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215505115|gb|EEC14609.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 275
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/164 (45%), Positives = 88/164 (53%), Gaps = 47/164 (28%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
SEPE RKLFIGGLDY+T +DSLK FEQWGE+VD VV
Sbjct: 8 SEPEQFRKLFIGGLDYKTTEDSLKGHFEQWGEVVDCVV---------------------- 45
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIAL-------------EQMDYFGQ 144
DGR VE KRAVPRE R + + + DYF Q
Sbjct: 46 ------------DGREVEPKRAVPREEAGRPEAQATVKKVFVGGLKDDVDESDLRDYFAQ 93
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+G I SVN+VT KETG KRGFAF+E+DDYD VDKIVL + +L+
Sbjct: 94 FGNILSVNLVTEKETGRKRGFAFVEYDDYDPVDKIVLKRHHMLK 137
>gi|194389862|dbj|BAG60447.1| unnamed protein product [Homo sapiens]
Length = 208
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 70/89 (78%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR 127
D AM+ RPH++DGRVVE KRAV RE R
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQR 97
>gi|195591012|ref|XP_002085238.1| GD12423 [Drosophila simulans]
gi|194197247|gb|EDX10823.1| GD12423 [Drosophila simulans]
Length = 351
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 97/161 (60%), Gaps = 14/161 (8%)
Query: 33 EDSQCSE---PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGF 89
E CS P K+FIGGL ++T+ +SL+ +F ++G+I + +VMKDP T+RSRGFGF
Sbjct: 15 ELGPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGF 74
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM 139
+T+S+ VD+ ++ HE+DG+ V+ K A PR + VT+ + LE +
Sbjct: 75 VTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDV 134
Query: 140 -DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
YF Q+G IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 135 KSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKV 175
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K++FEQ+G I D ++M D T R RGFGF+T+ +VD+
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 178 IHFHEINNKMVECKKAQPKEV 198
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
DYFG+YG I ++ + T RGF F+ F D + VDK++
Sbjct: 47 DYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVL 87
>gi|194382016|dbj|BAG64377.1| unnamed protein product [Homo sapiens]
Length = 254
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 70/89 (78%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR 127
D AM+ RPH++DGRVVE KRAV RE R
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQR 97
>gi|195113431|ref|XP_002001271.1| GI10693 [Drosophila mojavensis]
gi|193917865|gb|EDW16732.1| GI10693 [Drosophila mojavensis]
Length = 420
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 89/148 (60%), Gaps = 16/148 (10%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E LRK+F+GGL T D+++ FF Q+G + D VVM+DP++ RSRGFGF+TY E V+
Sbjct: 45 EHLRKIFVGGLSINTTADTMRQFFSQFGVVSDAVVMRDPISNRSRGFGFVTYVEPGSVEN 104
Query: 101 AMSNRPHEIDGRVVETKRAVPREV------KVRRVTKVQIALEQM----------DYFGQ 144
RPH ID + V+TKRA PR + + +I L + +YF Q
Sbjct: 105 VQRARPHIIDSKTVDTKRAFPRHEFNKAIGHLSNIKTNKIFLGGLKDCHDESTLREYFSQ 164
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDD 172
+G I SV ++ +KETG KRGF F+EF+D
Sbjct: 165 FGAINSVKVLLDKETGRKRGFGFLEFED 192
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL ++ +L+ +F Q+G I V V+ D T R RGFGF+ + ++ A++
Sbjct: 143 KIFLGGLKDCHDESTLREYFSQFGAINSVKVLLDKETGRKRGFGFLEFEDTASAGRALAQ 202
Query: 105 RPHEIDGRVVETKRAV 120
H I VE K++
Sbjct: 203 SKHSIKMATVEVKKST 218
>gi|119936162|gb|ABM06082.1| heterogeneous nuclear ribonucleoprotein A0 [Bos taurus]
gi|440909359|gb|ELR59272.1| Heterogeneous nuclear ribonucleoprotein A0, partial [Bos grunniens
mutus]
Length = 192
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|426231021|ref|XP_004009550.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Ovis aries]
Length = 302
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|32879847|gb|AAP88754.1| heterogeneous nuclear ribonucleoprotein A0 [synthetic construct]
gi|60653987|gb|AAX29686.1| heterogeneous nuclear ribonucleoprotein A0 [synthetic construct]
Length = 306
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|431892627|gb|ELK03060.1| Heterogeneous nuclear ribonucleoprotein A0 [Pteropus alecto]
Length = 307
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|73970814|ref|XP_538645.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 isoform 1
[Canis lupus familiaris]
Length = 310
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|344264962|ref|XP_003404558.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Loxodonta africana]
Length = 307
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|311250199|ref|XP_003124018.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Sus
scrofa]
Length = 302
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|119895504|ref|XP_593096.3| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Bos taurus]
gi|297477251|ref|XP_002689241.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Bos taurus]
gi|296485329|tpg|DAA27444.1| TPA: heterogeneous nuclear ribonucleoprotein A0 [Bos taurus]
Length = 305
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|426350099|ref|XP_004042619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0, partial
[Gorilla gorilla gorilla]
Length = 191
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|380792859|gb|AFE68305.1| heterogeneous nuclear ribonucleoprotein A0, partial [Macaca
mulatta]
Length = 229
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|114601869|ref|XP_001169959.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Pan
troglodytes]
gi|397518219|ref|XP_003829292.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Pan
paniscus]
gi|410211572|gb|JAA03005.1| heterogeneous nuclear ribonucleoprotein A0 [Pan troglodytes]
gi|410249756|gb|JAA12845.1| heterogeneous nuclear ribonucleoprotein A0 [Pan troglodytes]
gi|410295930|gb|JAA26565.1| heterogeneous nuclear ribonucleoprotein A0 [Pan troglodytes]
gi|410346956|gb|JAA40716.1| heterogeneous nuclear ribonucleoprotein A0 [Pan troglodytes]
Length = 306
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|388453863|ref|NP_001253568.1| heterogeneous nuclear ribonucleoprotein A0 [Macaca mulatta]
gi|384944966|gb|AFI36088.1| heterogeneous nuclear ribonucleoprotein A0 [Macaca mulatta]
Length = 303
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|5803036|ref|NP_006796.1| heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|297676052|ref|XP_002815964.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Pongo
abelii]
gi|8134660|sp|Q13151.1|ROA0_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A0;
Short=hnRNP A0
gi|773644|gb|AAA65094.1| heterogeneous ribonucleoprotein A0 [Homo sapiens]
gi|12654371|gb|AAH01008.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|13938287|gb|AAH07271.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|14424524|gb|AAH09284.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|15080451|gb|AAH11972.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|15278047|gb|AAH12980.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|17511973|gb|AAH18949.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|17939453|gb|AAH19271.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|20810403|gb|AAH28976.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|20987729|gb|AAH30249.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|48146089|emb|CAG33267.1| HNRPA0 [Homo sapiens]
gi|119582586|gb|EAW62182.1| heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|261861132|dbj|BAI47088.1| heterogeneous nuclear ribonucleoprotein A0 [synthetic construct]
Length = 305
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|395817866|ref|XP_003782366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Otolemur
garnettii]
Length = 238
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 96/165 (58%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIAL-------------EQ 138
YS + D AM+ PH +DG VE KRAV RE R ++ +
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+++F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|355691634|gb|EHH26819.1| hypothetical protein EGK_16888 [Macaca mulatta]
Length = 303
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|410948433|ref|XP_003980944.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Felis catus]
Length = 250
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|62484464|ref|NP_730245.2| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|194872120|ref|XP_001972967.1| GG15829 [Drosophila erecta]
gi|195328324|ref|XP_002030866.1| GM24349 [Drosophila sechellia]
gi|195494905|ref|XP_002095039.1| GE22169 [Drosophila yakuba]
gi|75027590|sp|Q9VVE5.3|MSIR6_DROME RecName: Full=RNA-binding protein Musashi homolog Rbp6
gi|21483526|gb|AAM52738.1| RE25373p [Drosophila melanogaster]
gi|61678495|gb|AAF49366.3| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|190654750|gb|EDV51993.1| GG15829 [Drosophila erecta]
gi|194119809|gb|EDW41852.1| GM24349 [Drosophila sechellia]
gi|194181140|gb|EDW94751.1| GE22169 [Drosophila yakuba]
Length = 369
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 98/162 (60%), Gaps = 14/162 (8%)
Query: 32 MEDSQCSE---PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFG 88
+E CS P K+FIGGL ++T+ +SL+ +F ++G+I + +VMKDP T+RSRGFG
Sbjct: 14 VELGPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFG 73
Query: 89 FITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQ 138
F+T+S+ VD+ ++ HE+DG+ V+ K A PR + VT+ + LE
Sbjct: 74 FVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLED 133
Query: 139 M-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ YF Q+G IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 134 VKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKV 175
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K++FEQ+G I D ++M D T R RGFGF+T+ +VD+
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 178 IHFHEINNKMVECKKAQPKEV 198
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 133 QIALEQM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
Q + E + DYFG+YG I ++ + T RGF F+ F D + VDK++
Sbjct: 39 QTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVL 87
>gi|355694908|gb|AER99825.1| heteroproteinous nuclear ribonucleoprotein A0 [Mustela putorius
furo]
Length = 295
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|1911429|gb|AAB50657.1| A0=heterogeneous nuclear ribonucleoprotein [human, placenta,
Peptide, 305 aa]
Length = 305
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFETFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|442633006|ref|NP_001261979.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
gi|440215929|gb|AGB94672.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
Length = 371
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 98/162 (60%), Gaps = 14/162 (8%)
Query: 32 MEDSQCSE---PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFG 88
+E CS P K+FIGGL ++T+ +SL+ +F ++G+I + +VMKDP T+RSRGFG
Sbjct: 14 VELGPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFG 73
Query: 89 FITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQ 138
F+T+S+ VD+ ++ HE+DG+ V+ K A PR + VT+ + LE
Sbjct: 74 FVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLED 133
Query: 139 M-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ YF Q+G IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 134 VKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKV 175
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K++FEQ+G I D ++M D T R RGFGF+T+ +VD+
Sbjct: 118 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 177
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 178 IHFHEINNKMVECKKAQPKEV 198
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 133 QIALEQM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
Q + E + DYFG+YG I ++ + T RGF F+ F D + VDK++
Sbjct: 39 QTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVL 87
>gi|194748703|ref|XP_001956784.1| GF24401 [Drosophila ananassae]
gi|190624066|gb|EDV39590.1| GF24401 [Drosophila ananassae]
Length = 370
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 98/162 (60%), Gaps = 14/162 (8%)
Query: 32 MEDSQCSE---PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFG 88
+E CS P K+FIGGL ++T+ +SL+ +F ++G+I + +VMKDP T+RSRGFG
Sbjct: 15 VELGPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFG 74
Query: 89 FITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQ 138
F+T+S+ VD+ ++ HE+DG+ V+ K A PR + VT+ + LE
Sbjct: 75 FVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLED 134
Query: 139 M-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ YF Q+G IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 135 VKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKV 176
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K++FEQ+G I D ++M D T R RGFGF+T+ +VD+
Sbjct: 119 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 178
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 179 IHFHEINNKMVECKKAQPKEV 199
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 133 QIALEQM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
Q + E + DYFG+YG I ++ + T RGF F+ F D + VDK++
Sbjct: 40 QTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVL 88
>gi|195442400|ref|XP_002068946.1| GK18043 [Drosophila willistoni]
gi|194165031|gb|EDW79932.1| GK18043 [Drosophila willistoni]
Length = 386
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 98/162 (60%), Gaps = 14/162 (8%)
Query: 32 MEDSQCSE---PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFG 88
+E CS P K+FIGGL ++T+ +SL+ +F ++G+I + +VMKDP T+RSRGFG
Sbjct: 28 VELGPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFG 87
Query: 89 FITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQ 138
F+T+S+ VD+ ++ HE+DG+ V+ K A PR + VT+ + LE
Sbjct: 88 FVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLED 147
Query: 139 M-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ YF Q+G IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 148 VKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKV 189
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K++FEQ+G I D ++M D T R RGFGF+T+ +VD+
Sbjct: 132 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 191
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 192 IHFHEINNKMVECKKAQPKEV 212
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 133 QIALEQM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
Q + E + DYFG+YG I ++ + T RGF F+ F D + VDK++
Sbjct: 53 QTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVL 101
>gi|402872594|ref|XP_003900193.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Papio
anubis]
Length = 303
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|332234557|ref|XP_003266473.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Nomascus
leucogenys]
Length = 306
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|402877500|ref|XP_003902463.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2-like
[Papio anubis]
Length = 344
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 96/160 (60%), Gaps = 16/160 (10%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFG-FITYSESKM 97
EPE LRKLFIG L + T ++SL++ EQWG VV++DP TK SR FG I +S
Sbjct: 74 EPEQLRKLFIGRLSFETTNESLRSHSEQWGMFPGCVVVRDPNTKLSRAFGSHICHSGGGG 133
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPREVKVRR----------VTKVQIALEQ---MDYFGQ 144
AM+ RPH++DGRVVE KRAV RE R V V+ E+ D F Q
Sbjct: 134 C--AMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGVKEDTEEHHLRDDFEQ 191
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKV 184
YG IE + ++T++ +G KRGFAF FDD+D VDK V+ K
Sbjct: 192 YGKIEVIEIMTDRGSGKKRGFAFDTFDDHDSVDKTVIQKC 231
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ FEQ+G+I +
Sbjct: 142 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGVKEDTEEHHLRDDFEQYGKIEVIE 199
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F T+ + VD+ + + H ++G E ++ + ++
Sbjct: 200 IMTDRGSGKKRGFAFDTFDDHDSVDKTVIQKCHTVNGHSCEVRKTLSKQ 248
>gi|443691822|gb|ELT93572.1| hypothetical protein CAPTEDRAFT_180669 [Capitella teleta]
Length = 243
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 99/162 (61%), Gaps = 19/162 (11%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
ED+ C +P K+FIGGL ++T + L+ +F ++GEI + +VM+DP+TKRSRGFGF+T+
Sbjct: 17 EDA-CQDP---GKMFIGGLSWQTTPEGLREYFAKYGEISECMVMRDPITKRSRGFGFVTF 72
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM------------- 139
S+ VD+ ++N PHE+D +V++ K A PR K+ +++
Sbjct: 73 SDPASVDKVLANGPHELDSKVIDPKVAFPRRPNTANQPKLVTKTKKIFVGGLSASTTVDD 132
Query: 140 --DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
YF Q+G IE ++ +K T RGFAF+ F++ DVVDK+
Sbjct: 133 VKQYFEQFGKIEDAMLMFDKATQRHRGFAFVTFENEDVVDKV 174
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T D +K +FEQ+G+I D ++M D T+R RGF F+T+ +VD+
Sbjct: 117 KKIFVGGLSASTTVDDVKQYFEQFGKIEDAMLMFDKATQRHRGFAFVTFENEDVVDKVCE 176
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 177 IHFHEINNKMVECKKAQPKEV 197
>gi|195016128|ref|XP_001984346.1| GH15068 [Drosophila grimshawi]
gi|193897828|gb|EDV96694.1| GH15068 [Drosophila grimshawi]
Length = 379
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 94/151 (62%), Gaps = 11/151 (7%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P K+FIGGL ++T+ +SL+ +F ++G+I + +VMKDP T+RSRGFGF+T+S+ VD
Sbjct: 35 PNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVD 94
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM-DYFGQYGTI 148
+ ++ HE+DG+ V+ K A PR + VT+ + LE + YF Q+G I
Sbjct: 95 KVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPI 154
Query: 149 ESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
E ++ +K+T RGF F+ F DVVDK+
Sbjct: 155 EDAMLMFDKQTNRHRGFGFVTFQSEDVVDKV 185
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K++FEQ+G I D ++M D T R RGFGF+T+ +VD+
Sbjct: 128 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 187
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 188 IHFHEINNKMVECKKAQPKEV 208
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 133 QIALEQM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
Q + E + DYFG+YG I ++ + T RGF F+ F D + VDK++
Sbjct: 49 QTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVL 97
>gi|432091440|gb|ELK24522.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 117
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE L+KLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLQKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR 127
D AM +RPH++DGRVVE KRAV RE R
Sbjct: 69 DAAMKSRPHKVDGRVVEPKRAVSREDSQR 97
>gi|195125567|ref|XP_002007249.1| GI12835 [Drosophila mojavensis]
gi|193918858|gb|EDW17725.1| GI12835 [Drosophila mojavensis]
Length = 383
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 95/156 (60%), Gaps = 11/156 (7%)
Query: 35 SQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSE 94
S P K+FIGGL ++T+ +SL+ +F ++G+I + +VMKDP T+RSRGFGF+T+S+
Sbjct: 34 SPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSD 93
Query: 95 SKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM-DYFG 143
VD+ ++ HE+DG+ V+ K A PR + VT+ + LE + YF
Sbjct: 94 PNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFE 153
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
Q+G IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 154 QFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKV 189
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K++FEQ+G I D ++M D T R RGFGF+T+ +VD+
Sbjct: 132 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 191
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 192 IHFHEINNKMVECKKAQPKEV 212
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 133 QIALEQM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
Q + E + DYFG+YG I ++ + T RGF F+ F D + VDK++
Sbjct: 53 QTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVL 101
>gi|115532848|ref|NP_001040944.1| Protein HRP-1, isoform c [Caenorhabditis elegans]
gi|351063092|emb|CCD71136.1| Protein HRP-1, isoform c [Caenorhabditis elegans]
Length = 308
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 85/137 (62%), Gaps = 13/137 (9%)
Query: 60 LKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRA 119
++ F+ Q+GEI D++VM+DP TKRSRGFGF+T+S VD AM RPH IDG+ V+ KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 120 VPREVKVRRVTKVQIA-----------LEQM--DYFGQYGTIESVNMVTNKETGAKRGFA 166
VPR+ K R + V E M +YF +YGT+ ++ +K T RGF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 167 FIEFDDYDVVDKIVLDK 183
F+ FDD+D VD+ VL K
Sbjct: 121 FVTFDDHDSVDQCVLQK 137
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 10 KLVPGLEVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWG 68
K P + TV P + +D SE S ++L++ G+ +D L +F ++G
Sbjct: 44 KQRPHIIDGKTVDPKRAV---PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYG 100
Query: 69 EIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ ++ D T++ RGFGF+T+ + VD+ + + H ++G + ++ + ++
Sbjct: 101 TVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKD 155
>gi|71988518|ref|NP_001023199.1| Protein HRP-1, isoform b [Caenorhabditis elegans]
gi|351063091|emb|CCD71135.1| Protein HRP-1, isoform b [Caenorhabditis elegans]
Length = 309
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 85/137 (62%), Gaps = 13/137 (9%)
Query: 60 LKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRA 119
++ F+ Q+GEI D++VM+DP TKRSRGFGF+T+S VD AM RPH IDG+ V+ KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 120 VPREVKVRRVTKVQIA-----------LEQM--DYFGQYGTIESVNMVTNKETGAKRGFA 166
VPR+ K R + V E M +YF +YGT+ ++ +K T RGF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 167 FIEFDDYDVVDKIVLDK 183
F+ FDD+D VD+ VL K
Sbjct: 121 FVTFDDHDSVDQCVLQK 137
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 10 KLVPGLEVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWG 68
K P + TV P + +D SE S ++L++ G+ +D L +F ++G
Sbjct: 44 KQRPHIIDGKTVDPKRAV---PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYG 100
Query: 69 EIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ ++ D T++ RGFGF+T+ + VD+ + + H ++G + ++ + ++
Sbjct: 101 TVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKD 155
>gi|391332405|ref|XP_003740625.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like
[Metaseiulus occidentalis]
Length = 259
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 96/146 (65%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T + L+ +F ++GEI +V+VMKDP T+RSRGFGF+T+++ V++ ++N
Sbjct: 23 KMFIGGLSWQTAPEGLREYFSKFGEISEVMVMKDPTTRRSRGFGFVTFADPASVEKVLAN 82
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM-DYFGQYGTIESVNM 153
PHE+DG+ ++ K A P+ + VT+ + LE + +YF Q+G IE +
Sbjct: 83 GPHELDGKKIDPKIAFPKRAHPKMVTRTKKVFVGGLSAPTTLEDVKNYFQQFGRIEDAML 142
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +K+T RGF F+ F+ DVVDK+
Sbjct: 143 MFDKQTNRHRGFGFVTFELEDVVDKV 168
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 53/81 (65%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G I D ++M D T R RGFGF+T+ +VD+
Sbjct: 111 KKVFVGGLSAPTTLEDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFELEDVVDKVCE 170
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 171 VHFHEINNKMVECKKAQPKEV 191
>gi|259089191|ref|NP_001158633.1| Heterogeneous nuclear ribonucleoprotein A0 [Oncorhynchus mykiss]
gi|225705442|gb|ACO08567.1| Heterogeneous nuclear ribonucleoprotein A0 [Oncorhynchus mykiss]
Length = 224
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 95/152 (62%), Gaps = 13/152 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLF+GGL+ T DD L+ FEQ+G++ D VV+++ +RSR FGF+TYS + D AM
Sbjct: 5 LCKLFVGGLNVETTDDGLRQHFEQYGQLTDCVVVQNQQLQRSRCFGFVTYSSGEEADAAM 64
Query: 103 SNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGTIE 149
+ RPH +DG VE KRAV RE KV+++ K I + + DYF Q+G IE
Sbjct: 65 AARPHVVDGTNVELKRAVAREDAGRPEALAKVKKIFIGGLKDDIEDDHLNDYFSQFGAIE 124
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
++++K+T KRGF F+ F+D D DK V+
Sbjct: 125 KAEVISDKQTLKKRGFGFVYFEDNDSADKAVV 156
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDV 73
V GT V L + A ED+ PE+L +K+FIGGL DD L +F Q+G I
Sbjct: 71 VDGTNVELKRAV--AREDA--GRPEALAKVKKIFIGGLKDDIEDDHLNDYFSQFGAIEKA 126
Query: 74 VVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
V+ D T + RGFGF+ + ++ D+A+ + H I+G VE K+A+ ++
Sbjct: 127 EVISDKQTLKKRGFGFVYFEDNDSADKAVVLKFHTINGHKVEVKKALTKQ 176
>gi|195036932|ref|XP_001989922.1| GH19059 [Drosophila grimshawi]
gi|193894118|gb|EDV92984.1| GH19059 [Drosophila grimshawi]
Length = 391
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 91/155 (58%), Gaps = 16/155 (10%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
D + E LR++F+GGL T ++++ FF Q+G++ D +VM+DP++ RSR FGF+T+
Sbjct: 37 DIESENSEHLRRIFVGGLSLNTTAETMRHFFSQFGDVADAIVMRDPISNRSRCFGFVTFV 96
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR--------RVTKVQIA--------LE 137
E+ V+ RPH +DG+ VETKRA PR + R K+ I
Sbjct: 97 EAASVENVQRTRPHIVDGKTVETKRAFPRHQFSKSMGHLSNIRTNKIFIGGLRDCHDETT 156
Query: 138 QMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDD 172
+YF Q+G I SV ++ +KETG RGF F+EF+D
Sbjct: 157 LREYFAQFGNINSVKVLLDKETGRIRGFGFLEFED 191
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++ +L+ +F Q+G I V V+ D T R RGFGF+ + + A+
Sbjct: 142 KIFIGGLRDCHDETTLREYFAQFGNINSVKVLLDKETGRIRGFGFLEFEDIASAARALGQ 201
Query: 105 RPHEIDGRVVETKR 118
H I ++VE K+
Sbjct: 202 GKHLIGCKMVEVKK 215
>gi|348575081|ref|XP_003473318.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Cavia
porcellus]
Length = 301
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 97/165 (58%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+G +E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|417409570|gb|JAA51284.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 309
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 98/165 (59%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
M++SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 6 MDNSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 59
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 60 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 119
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 120 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 164
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 77 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 134
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 135 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 182
>gi|403285634|ref|XP_003934122.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Saimiri
boliviensis boliviensis]
Length = 258
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 97/165 (58%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K +G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKLSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D ++ + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKLSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|291387384|ref|XP_002710273.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Oryctolagus
cuniculus]
Length = 298
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 97/165 (58%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+G +E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|440586615|emb|CCK33029.1| RRM domain protein Musashi [Platynereis dumerilii]
Length = 205
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 105/176 (59%), Gaps = 17/176 (9%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL ++T + L+ +F ++GEI + +VM+DP+TKRSRGFGF+TY++ VD+ ++N
Sbjct: 24 KMFVGGLSWQTTPEGLREYFTKYGEIKECMVMRDPITKRSRGFGFVTYADPGSVDKVLAN 83
Query: 105 RPHEIDGRVVETKRAVPREVK-------VRRVTKV-------QIALEQM-DYFGQYGTIE 149
PHE+D ++++ K A PR V R K+ LE + YF Q+G IE
Sbjct: 84 GPHELDTKLIDPKLAFPRRPNATQQPKMVTRTKKIFVGGLSASTTLEDVKQYFSQFGKIE 143
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGEDHRTHGTH 205
++ +K T RGFAF+ F+ DVVDK+ ++ E++ +++ + G H
Sbjct: 144 DAMLMFDKATQRHRGFAFVTFECEDVVDKVC--EIHFHEINNKMVECKKSPAKGGH 197
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F Q+G+I D ++M D T+R RGF F+T+ +VD+
Sbjct: 116 KKIFVGGLSASTTLEDVKQYFSQFGKIEDAMLMFDKATQRHRGFAFVTFECEDVVDKVCE 175
Query: 104 NRPHEIDGRVVETKRA 119
HEI+ ++VE K++
Sbjct: 176 IHFHEINNKMVECKKS 191
>gi|296192806|ref|XP_002744232.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Callithrix jacchus]
Length = 302
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/165 (41%), Positives = 97/165 (58%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K +G KRGF F+ F ++D DK + K
Sbjct: 115 IEHFSQFGTVEKAEIIADKLSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D ++ + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKLSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|254566735|ref|XP_002490478.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|238030274|emb|CAY68197.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|328350869|emb|CCA37269.1| Nuclear polyadenylated RNA-binding protein 4 [Komagataella pastoris
CBS 7435]
Length = 462
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 100/151 (66%), Gaps = 8/151 (5%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +++L+ +F Q+G+I D+ +M+D T RSRGFGF+T++++ VDE +
Sbjct: 154 KMFIGGLNWETTEETLRNYFGQFGDITDLTIMRDNATGRSRGFGFLTFTKTASVDEVLKK 213
Query: 105 RPHEIDGRVVETKRAVPREV--KVRRVTKVQIALEQ-----MDYFGQYGTIESVNMVTNK 157
+ H +DG++++ KRA+PRE K ++ IA E DYF Q+GTI ++ +K
Sbjct: 214 Q-HVLDGKLIDPKRAIPREEQDKTGKIFVGGIAAEVTEEDFTDYFSQFGTIIDAQLMIDK 272
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+TG RGF F+ +D D VD++ +K V L+
Sbjct: 273 DTGRSRGFGFVTYDSPDAVDRVCANKYVPLK 303
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ ++ +F Q+G I+D +M D T RSRGFGF+TY VD +N
Sbjct: 238 KIFVGGIAAEVTEEDFTDYFSQFGTIIDAQLMIDKDTGRSRGFGFVTYDSPDAVDRVCAN 297
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV 132
+ + GR +E KRA PR + + T
Sbjct: 298 KYVPLKGRSMEIKRAEPRNQQQNQRTNA 325
>gi|226443091|ref|NP_084148.1| heterogeneous nuclear ribonucleoprotein A0 [Mus musculus]
gi|81916834|sp|Q9CX86.1|ROA0_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A0;
Short=hnRNP A0
gi|12859567|dbj|BAB31694.1| unnamed protein product [Mus musculus]
Length = 305
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 96/165 (58%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+G +E ++ +K++G KRGF F+ F +D DK + K
Sbjct: 115 IEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVK 159
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|392354145|ref|XP_003751688.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Rattus
norvegicus]
Length = 307
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 96/165 (58%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+G +E ++ +K++G KRGF F+ F +D DK + K
Sbjct: 115 IEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVK 159
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|126290015|ref|XP_001367952.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Monodelphis domestica]
Length = 486
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 96/163 (58%), Gaps = 19/163 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 183 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 236
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 237 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 296
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
+F Q+GT+E ++ +K++G KRGF F+ F +D DK +
Sbjct: 297 VEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAV 339
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 254 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLVEHFSQFGTVEKAEI 311
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 312 IADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKE 359
>gi|195997575|ref|XP_002108656.1| hypothetical protein TRIADDRAFT_5340 [Trichoplax adhaerens]
gi|190589432|gb|EDV29454.1| hypothetical protein TRIADDRAFT_5340, partial [Trichoplax
adhaerens]
Length = 172
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 94/147 (63%), Gaps = 6/147 (4%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
RKLF+GGL + T ++ + FE++GE+V+ ++++DPVTKRSRGFGFI Y +D+A+
Sbjct: 3 RKLFVGGLSWETTEERFREHFEKFGEVVNCIILRDPVTKRSRGFGFIIYRNVSDIDKALL 62
Query: 104 NRPHEIDGRVVETKRAVPRE-VKVRRVTKVQIALEQMD-----YFGQYGTIESVNMVTNK 157
+ H IDG+ VE KR+VPRE + +++ + D YFG+YG + V ++ +K
Sbjct: 63 HATHVIDGKQVEPKRSVPREQTRTKKIFIGGLPPNTSDEDLKIYFGKYGVVSEVELLRDK 122
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKV 184
ETG RGF F+ FD + K ++ K+
Sbjct: 123 ETGRLRGFGFVSFDTPEGAQKALVTKM 149
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Query: 26 MIINKAMEDSQCSEPESLR--KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKR 83
+I K +E + E R K+FIGGL T+D+ LK +F ++G + +V +++D T R
Sbjct: 67 VIDGKQVEPKRSVPREQTRTKKIFIGGLPPNTSDEDLKIYFGKYGVVSEVELLRDKETGR 126
Query: 84 SRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPR 122
RGFGF+++ + +A+ + HEI+G++ + K+A P+
Sbjct: 127 LRGFGFVSFDTPEGAQKALVTKMHEINGKMAQVKKAEPK 165
>gi|432096566|gb|ELK27213.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 117
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 69/89 (77%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE L KLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLWKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR 127
D AM +RPH++DGRVV+ KRAV RE R
Sbjct: 69 DAAMKSRPHKVDGRVVQPKRAVSREDSQR 97
>gi|366992097|ref|XP_003675814.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
gi|342301679|emb|CCC69450.1| hypothetical protein NCAS_0C04600 [Naumovozyma castellii CBS 4309]
Length = 581
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 113/202 (55%), Gaps = 14/202 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D LK +F ++G +V++ +MKD T RSRGFGF+T+ VDE +
Sbjct: 197 KMFIGGLNWETTEDGLKNYFSKYGNVVELKIMKDGATGRSRGFGFLTFENPSSVDEVVKT 256
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KR++PRE + + K+ + E D+F QYGTI ++ +
Sbjct: 257 Q-HILDGKVIDPKRSIPREEQ-DKTGKIFVGGIGTDVRPKEFEDFFAQYGTIIDAQLMLD 314
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGEDHRTHGTHQEAKVDGVTTT 216
K+TG RGF F+ +D D VD++ +K + + Q I + R +Q A T
Sbjct: 315 KDTGRSRGFGFVTYDSGDAVDRVCQNKYIEFKGKQIEIKRAEPR---HNQRAAASQPMNT 371
Query: 217 NQTH-GTIREVVGMDNSKVVAG 237
NQT G + + M V+ G
Sbjct: 372 NQTPLGMVNPMAQMYQPPVMGG 393
>gi|195036632|ref|XP_001989774.1| GH18982 [Drosophila grimshawi]
gi|193893970|gb|EDV92836.1| GH18982 [Drosophila grimshawi]
Length = 641
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ D LK +F +G + DV++MKDPVT+RSRGFGFIT+ E VD+ +
Sbjct: 200 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 259
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 260 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVM 318
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 319 LMDQQTKRHRGFGFVTFENEDVVDRV 344
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
A ++ + +K+F+GG+ T+ + +KA+F Q+G + + V++ D TKR RGFGF+
Sbjct: 274 ATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFV 333
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV 124
T+ +VD H I + VE K+A P+E
Sbjct: 334 TFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 367
>gi|444728164|gb|ELW68628.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 201
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 68/89 (76%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE L KLFIGG + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLWKLFIGGSSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR 127
D AM+ RPH++DGRVVE KRAV RE R
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSREDSQR 97
>gi|195500854|ref|XP_002097552.1| GE24427 [Drosophila yakuba]
gi|194183653|gb|EDW97264.1| GE24427 [Drosophila yakuba]
Length = 430
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 92/166 (55%), Gaps = 26/166 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E LRK+FIGGL +T D+L+ FF Q+G + D VVM+DPV SRGFGF+TY + K ++
Sbjct: 29 EHLRKIFIGGLSTQTTMDTLREFFSQFGSVADAVVMRDPVNNHSRGFGFVTYVDPKSIEI 88
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRR----------------VTKVQIALEQM----- 139
RPH ID + VETK A+PR R V +I L +
Sbjct: 89 VQKARPHTIDNKAVETKPALPRHEFNRAGGVGSILGGCSAGAGFVKSNKIFLGGLKDFHD 148
Query: 140 -----DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF Q+G + +V ++ +K+TG KRGF F+EF+D +K +
Sbjct: 149 EKTVREYFSQFGAVATVKLLMDKDTGRKRGFGFLEFEDPSSAEKAL 194
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL ++ +++ +F Q+G + V ++ D T R RGFGF+ + + ++A++
Sbjct: 137 KIFLGGLKDFHDEKTVREYFSQFGAVATVKLLMDKDTGRKRGFGFLEFEDPSSAEKALAQ 196
Query: 105 RPHEIDGRVVETKRAVPREVKVRRV 129
H I +VE KR+ + +R+
Sbjct: 197 GKHSILQTLVEVKRSTQKPDPGKRL 221
>gi|449266123|gb|EMC77233.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Columba livia]
Length = 132
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 13/122 (10%)
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR------ 128
VM+DP TKRSRGFGF+TYS + VD AM+ RPH++DGRVVE KRAV RE R
Sbjct: 1 VMRDPNTKRSRGFGFVTYSSVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTV 60
Query: 129 ----VTKVQIALEQM---DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
V ++ E+ DYFGQYG IE + ++T++ +G KRGFAF+ FDD+D VDKIV+
Sbjct: 61 KKIFVGGIKEDTEEHHLRDYFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI 120
Query: 182 DK 183
K
Sbjct: 121 QK 122
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +F Q+G+I +
Sbjct: 34 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFGQYGKIEVIE 91
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVE 115
+M D + + RGF F+T+ + VD+ + + H ++G E
Sbjct: 92 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCE 132
>gi|351712710|gb|EHB15629.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 332
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 94/177 (53%), Gaps = 39/177 (22%)
Query: 7 YIFKLVPGLEVAGTVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQ 66
+ F LV E V +I+K+ EPE LRKLFIGGL + T D++LK+ EQ
Sbjct: 16 HSFLLVDATEETSLVSLPTAVISKS---ESPKEPEQLRKLFIGGLSFETTDETLKSHSEQ 72
Query: 67 WGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKV 126
WG + D VVM+DP TKRSRGFGF+TY+ + VD A + RP
Sbjct: 73 WGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEVDAARNARPR------------------- 113
Query: 127 RRVTKVQIALEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+YG IE + ++T++ +G K GFAF+ FDD+D VDKIV+ K
Sbjct: 114 -----------------KYGKIEVIEIMTDRGSGKKGGFAFVTFDDHDSVDKIVIQK 153
>gi|402868384|ref|XP_003898284.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 263
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 74/97 (76%), Gaps = 3/97 (3%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EP+ LRKLFIGGL + T D+SL++ FEQWG + D VVM+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPKQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR---RVTKV 132
D AM+ RPH+++GRVVE KR+V RE R R+T V
Sbjct: 69 DAAMNARPHKVNGRVVEPKRSVSREDSQRPGARLTTV 105
>gi|410914419|ref|XP_003970685.1| PREDICTED: RNA-binding protein 34-like [Takifugu rubripes]
Length = 358
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 103/176 (58%), Gaps = 20/176 (11%)
Query: 19 GTVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKD 78
G+V+ + + K M D C KLF+GGL+ T+DD L+ FEQ+G + D VV+ +
Sbjct: 41 GSVLLVILQKKKIMSDQLC-------KLFVGGLNVDTDDDGLRKHFEQFGTLTDCVVVVN 93
Query: 79 PVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE--------VKVRR-- 128
+RSR FGF+TYS + D AM+ RPH +DG VE KRAV RE KV++
Sbjct: 94 KQVQRSRCFGFVTYSSPEEADSAMAARPHTVDGNPVEVKRAVAREDAGKPEALAKVKKIF 153
Query: 129 VTKVQIALEQ---MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
V ++ E +++F Q+G IE ++++K++G KRGF F+ F D D DK V+
Sbjct: 154 VGGLKDDTEDNHLLEHFSQFGEIEKAEVISDKDSGKKRGFGFVYFVDQDSADKSVV 209
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 28 INKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ +A+ +PE+L +K+F+GGL T D+ L F Q+GEI V+ D + +
Sbjct: 131 VKRAVAREDAGKPEALAKVKKIFVGGLKDDTEDNHLLEHFSQFGEIEKAEVISDKDSGKK 190
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGFGF+ + + D+++ + H I+G VE K+A+ ++
Sbjct: 191 RGFGFVYFVDQDSADKSVVIKFHTINGHKVEVKKALTKQ 229
>gi|194741288|ref|XP_001953121.1| GF17369 [Drosophila ananassae]
gi|190626180|gb|EDV41704.1| GF17369 [Drosophila ananassae]
Length = 419
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 91/163 (55%), Gaps = 23/163 (14%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E LRK+FIGGL +T ++++ FF Q+G + D VVM+DP+T SRGFGF+TY + V+
Sbjct: 45 EHLRKIFIGGLSTQTTVETVREFFRQFGAVADAVVMRDPMTNHSRGFGFVTYVDGNSVEN 104
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM--------------------- 139
PH ID + VETKRA+PR ++ ++ M
Sbjct: 105 VQRAGPHSIDNKTVETKRALPRHEFLKPGGGAGNSIGAMTGVKSNKIFLGGLKDCHDESS 164
Query: 140 --DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF Q+G I SV ++ +K+TG KRGF F+EF+D D+ +
Sbjct: 165 IREYFSQFGGITSVKLLLDKDTGRKRGFGFLEFEDSASADQAL 207
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL ++ S++ +F Q+G I V ++ D T R RGFGF+ + +S D+A++
Sbjct: 150 KIFLGGLKDCHDESSIREYFSQFGGITSVKLLLDKDTGRKRGFGFLEFEDSASADQALAQ 209
Query: 105 RPHEIDGRVVETKRAVPREVKVRRV 129
H I+ VE K++ + +R+
Sbjct: 210 GKHTINMTTVEVKKSTQKPDPGKRL 234
>gi|47214179|emb|CAF96980.1| unnamed protein product [Tetraodon nigroviridis]
Length = 487
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 96/156 (61%), Gaps = 13/156 (8%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ L KLF+GGL+ T+DD L+ FEQ+G + D VV+ + +RSR FGF+TYS + D
Sbjct: 2 DQLCKLFVGGLNVDTDDDGLRKHFEQFGTLTDCVVVVNKQVQRSRCFGFVTYSTPEEADS 61
Query: 101 AMSNRPHEIDGRVVETKRAVPRE--------VKVRR--VTKVQIALEQ---MDYFGQYGT 147
AM+ RPH +DG VE KRAV RE KV++ V ++ E+ ++F Q+G
Sbjct: 62 AMAARPHTVDGNPVEVKRAVAREDAGKPEALAKVKKIFVGGLKDDTEENHLTEHFSQFGE 121
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
IE ++++KETG KRGF F+ F D D DK V+ K
Sbjct: 122 IEKAEVISDKETGKKRGFGFVYFVDQDSADKSVVIK 157
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 75/132 (56%), Gaps = 13/132 (9%)
Query: 65 EQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE- 123
+++G++ D VV+K+ RSR FGFITYS + D AM+ PH +DG VE KRAV R+
Sbjct: 279 QKYGQLSDCVVVKNKELGRSRCFGFITYSTPEEADSAMAASPHVVDGHNVELKRAVARQD 338
Query: 124 ---------VKVRRVTKVQIALEQ---MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFD 171
VK V VQ +E DYF Q+G +E ++++K TG KRGF F+ F
Sbjct: 339 ADNPEVLANVKKIFVGGVQDHVEAEHLTDYFSQFGAVEKAEIISDKLTGKKRGFGFVFFV 398
Query: 172 DYDVVDKIVLDK 183
D D K VL +
Sbjct: 399 DTDSATKAVLTR 410
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 28 INKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ +A+ +PE+L +K+F+GGL T ++ L F Q+GEI V+ D T +
Sbjct: 77 VKRAVAREDAGKPEALAKVKKIFVGGLKDDTEENHLTEHFSQFGEIEKAEVISDKETGKK 136
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGFGF+ + + D+++ + H I+G VE K+A+ ++
Sbjct: 137 RGFGFVYFVDQDSADKSVVIKFHTINGHKVEVKKALTKQ 175
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 28 INKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ +A+ PE L +K+F+GG+ + L +F Q+G + ++ D +T +
Sbjct: 330 LKRAVARQDADNPEVLANVKKIFVGGVQDHVEAEHLTDYFSQFGAVEKAEIISDKLTGKK 389
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGFGF+ + ++ +A+ R H I G VE K+A+ ++
Sbjct: 390 RGFGFVFFVDTDSATKAVLTRYHTISGNKVEAKKAMTKQ 428
>gi|313230121|emb|CBY07825.1| unnamed protein product [Oikopleura dioica]
Length = 422
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 96/166 (57%), Gaps = 18/166 (10%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
D + +EPE RK+FIG L Y +++ LK F ++GEIVD VV KDP TK ++GFGF+T++
Sbjct: 9 DDEFNEPEQARKIFIGNLPYEADEEMLKNHFSRFGEIVDCVVPKDPKTKFAKGFGFVTFT 68
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPR-----EVKVRRVTKVQIA-------LEQMDY 141
VDE M+NRPH++ GRV+E KRA+ R TK+ I E +Y
Sbjct: 69 RGTAVDEVMTNRPHKVAGRVLEPKRAISRNESRDPAAAVSTTKLYIGSIGDLTETEIKEY 128
Query: 142 FGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
F +G I T E A +G AF+ F D+D VD+IV DK V
Sbjct: 129 FSSFGAI------TEFELHADKGQAFVTFQDHDPVDRIVGDKHTVA 168
>gi|324511674|gb|ADY44854.1| RNA-binding protein Musashi Rbp6 [Ascaris suum]
Length = 345
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 109/183 (59%), Gaps = 23/183 (12%)
Query: 28 INKAMED--SQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSR 85
++ A ED S C++P K+FIGGL ++T + L+ +F ++GE+ + +VM+DP TKR+R
Sbjct: 29 LSPASEDGSSGCNDPG---KMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRAR 85
Query: 86 GFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IA 135
GFGFIT+++ V++ +++ HE+DG+ ++ K A P+ + + + K +
Sbjct: 86 GFGFITFADPASVEKVLAHDQHELDGKKIDPKVAFPKRAQPKMIIKTKKVFIGGLSATST 145
Query: 136 LEQM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
LE M +YF QYG +E ++ +K T RGF FI FD+ DV DK V E+ I
Sbjct: 146 LEDMRNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDK-------VCEIHFHEI 198
Query: 195 NGE 197
NG+
Sbjct: 199 NGK 201
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 55/81 (67%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+FIGGL + + ++ +FEQ+G++ D ++M D T+R RGFGFIT+ + D+
Sbjct: 133 KKVFIGGLSATSTLEDMRNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCE 192
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+G++VE K+A P+EV
Sbjct: 193 IHFHEINGKMVECKKAQPKEV 213
>gi|396473500|ref|XP_003839355.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
gi|312215924|emb|CBX95876.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
Length = 547
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 101/168 (60%), Gaps = 16/168 (9%)
Query: 28 INKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGF 87
+N+ +SQC RK+FIGGL++ T +DSLK +F Q+GE+ + VM+D T RSRGF
Sbjct: 77 LNQVNANSQC------RKMFIGGLNWETTEDSLKGYFTQFGEVSECTVMRDSATGRSRGF 130
Query: 88 GFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--M 139
GF+T+ + K V+ M H +DG++++ KRA+PRE + R +K+ Q A E+
Sbjct: 131 GFLTFRDPKCVNIVMVKE-HYLDGKIIDPKRAIPREEQ-ERTSKIFVGGVSQEATEEDFT 188
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+F Q+G + ++ +KETG RGF F+ FD VD + + +L
Sbjct: 189 AFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAVDATLKGPLQIL 236
>gi|397484877|ref|XP_003813592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2-like
[Pan paniscus]
Length = 257
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 69/89 (77%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+SL++ FEQWG + D +VM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFETIDESLRSHFEQWGTLTDCLVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVR 127
D AM+ RPH++DGRVVE KRAV RE R
Sbjct: 69 DAAMNTRPHKVDGRVVEPKRAVSREDSQR 97
>gi|410730475|ref|XP_003671417.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
gi|401780235|emb|CCD26174.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
Length = 607
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 117/204 (57%), Gaps = 13/204 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D L+ +F ++G ++++ +MKD T RSRGFGF+T+ VDE +
Sbjct: 198 KMFIGGLNWETTEDGLRNYFNKYGNVIELKIMKDGATGRSRGFGFLTFEHPSSVDEVVKT 257
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQI--------ALEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KR++P+E + ++ K+ + E ++F Q+GTI ++ +
Sbjct: 258 Q-HILDGKVIDPKRSIPKEEQ-DKIGKIFVGGIGTDVRPKEFEEFFAQFGTIIDAQLMLD 315
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ-EVINGEDHRTHGTHQEAKVDGVTT 215
K+TG RGF FI +D D VDK+ +K + + Q EV + +HG +A + T
Sbjct: 316 KDTGRSRGFGFITYDSADAVDKVCQNKYIDFKGKQIEVKRAQQRHSHGKPADASNSQMLT 375
Query: 216 TNQ--THGTIREVVGMDNSKVVAG 237
N T G + + M + ++ G
Sbjct: 376 PNPMATPGMVNPMGQMYQNPMMPG 399
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E + + K+F+GG+ + FF Q+G I+D +M D T RSRGFGFITY + V
Sbjct: 276 EQDKIGKIFVGGIGTDVRPKEFEEFFAQFGTIIDAQLMLDKDTGRSRGFGFITYDSADAV 335
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D+ N+ + G+ +E KRA R
Sbjct: 336 DKVCQNKYIDFKGKQIEVKRAQQR 359
>gi|443705196|gb|ELU01851.1| hypothetical protein CAPTEDRAFT_169740 [Capitella teleta]
Length = 186
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 85/136 (62%), Gaps = 24/136 (17%)
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA 135
M+DP+T+RSRGFGFITY ++ VDEA RPH ID R VE KRAVPRE R + ++
Sbjct: 1 MRDPMTRRSRGFGFITYKTAESVDEAQKARPHTIDKRQVEPKRAVPREDSGR--PEAHMS 58
Query: 136 LEQM---------------DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
L+++ +YF +YG IES++++T+KET RGF FI FDDYD VDKIV
Sbjct: 59 LKKIFVGGIKEDTTEAHLREYFSEYGPIESIDIITDKETKRSRGFGFITFDDYDPVDKIV 118
Query: 181 LDKVVVLEVDQEVING 196
+ + +ING
Sbjct: 119 MQR-------HHMING 127
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 29 NKAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSR 85
+A+ PE SL+K+F+GG+ T + L+ +F ++G I + ++ D TKRSR
Sbjct: 42 KRAVPREDSGRPEAHMSLKKIFVGGIKEDTTEAHLREYFSEYGPIESIDIITDKETKRSR 101
Query: 86 GFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPR 122
GFGFIT+ + VD+ + R H I+G E K+A+P+
Sbjct: 102 GFGFITFDDYDPVDKIVMQRHHMINGHKSEVKKALPK 138
>gi|388329663|gb|AFK29218.1| musashi-PB, partial [Drosophila buzzatii]
Length = 636
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ + LK +F +G + DV++MKDPVT+RSRGFGFIT+ E VD+ +
Sbjct: 187 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 246
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 247 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVM 305
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 306 LMDQQTKRHRGFGFVTFENEDVVDRV 331
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
A ++ + +K+F+GG+ T+ + +KA+F Q+G + + V++ D TKR RGFGF+
Sbjct: 261 ATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFV 320
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV 124
T+ +VD H I + VE K+A P+E
Sbjct: 321 TFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 354
>gi|388329666|gb|AFK29221.1| musashi-PA [Drosophila buzzatii]
Length = 671
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ + LK +F +G + DV++MKDPVT+RSRGFGFIT+ E VD+ +
Sbjct: 222 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 281
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 282 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVM 340
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 341 LMDQQTKRHRGFGFVTFENEDVVDRV 366
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ + +KA+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 309 KKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 368
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 369 IHFHTIKNKKVECKKAQPKEA 389
>gi|209733364|gb|ACI67551.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 261
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 94/152 (61%), Gaps = 13/152 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLF+GGL+ T+DD L+ FEQ+G++ D VV+ + +RSR FGF+TYS ++ D AM
Sbjct: 7 LCKLFVGGLNVDTDDDGLRKHFEQYGQLTDCVVVVNKQLQRSRCFGFVTYSSAEEADAAM 66
Query: 103 SNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQMD-YFGQYGTIE 149
+ RPH +DG VE KRAV RE KV+++ K I E ++ YF Q+G IE
Sbjct: 67 AARPHVVDGTNVELKRAVAREDAGKPEALAKVKKIFIGGLKDDIEDEHLNEYFSQFGEIE 126
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
++ KETG KRGF F+ F D D DK V+
Sbjct: 127 KAEVIAEKETGKKRGFGFVHFTDNDSADKAVV 158
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDV 73
V GT V L + A ED+ +PE+L +K+FIGGL D+ L +F Q+GEI
Sbjct: 73 VDGTNVELKRAV--AREDA--GKPEALAKVKKIFIGGLKDDIEDEHLNEYFSQFGEIEKA 128
Query: 74 VVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
V+ + T + RGFGF+ ++++ D+A+ + H I+G VE K+A+ ++
Sbjct: 129 EVIAEKETGKKRGFGFVHFTDNDSADKAVVLKFHNINGHKVEVKKALTKQ 178
>gi|21430706|gb|AAM51031.1| RH49436p [Drosophila melanogaster]
Length = 634
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ D LK +F +G + DV++MKDPVT+RSRGFGFIT+ E V++ +
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 264 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVM 322
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 323 LMDQQTKRHRGFGFVTFENEDVVDRV 348
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ + +KA+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 291 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 350
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 351 IHFHTIKNKKVECKKAQPKEA 371
>gi|28571891|ref|NP_733108.2| musashi, isoform B [Drosophila melanogaster]
gi|386766502|ref|NP_001247303.1| musashi, isoform C [Drosophila melanogaster]
gi|442621134|ref|NP_001262960.1| musashi, isoform F [Drosophila melanogaster]
gi|28381465|gb|AAN14056.2| musashi, isoform B [Drosophila melanogaster]
gi|383292949|gb|AFH06620.1| musashi, isoform C [Drosophila melanogaster]
gi|383505544|gb|AFH36351.1| FI20028p1 [Drosophila melanogaster]
gi|440217893|gb|AGB96340.1| musashi, isoform F [Drosophila melanogaster]
Length = 634
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ D LK +F +G + DV++MKDPVT+RSRGFGFIT+ E V++ +
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 264 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVM 322
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 323 LMDQQTKRHRGFGFVTFENEDVVDRV 348
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ + +KA+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 291 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 350
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 351 IHFHTIKNKKVECKKAQPKEA 371
>gi|386766504|ref|NP_001247304.1| musashi, isoform D [Drosophila melanogaster]
gi|383292950|gb|AFH06621.1| musashi, isoform D [Drosophila melanogaster]
Length = 605
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ D LK +F +G + DV++MKDPVT+RSRGFGFIT+ E V++ +
Sbjct: 175 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 234
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 235 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVM 293
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 294 LMDQQTKRHRGFGFVTFENEDVVDRV 319
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ + +KA+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 262 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 321
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 322 IHFHTIKNKKVECKKAQPKEA 342
>gi|195349467|ref|XP_002041266.1| GM10251 [Drosophila sechellia]
gi|194122961|gb|EDW45004.1| GM10251 [Drosophila sechellia]
Length = 634
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ D LK +F +G + DV++MKDPVT+RSRGFGFIT+ E V++ +
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 263
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 264 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVM 322
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 323 LMDQQTKRHRGFGFVTFENEDVVDRV 348
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ + +KA+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 291 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 350
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 351 IHFHTIKNKKVECKKAQPKEA 371
>gi|195112196|ref|XP_002000660.1| GI22407 [Drosophila mojavensis]
gi|193917254|gb|EDW16121.1| GI22407 [Drosophila mojavensis]
Length = 679
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ + LK +F +G + DV++MKDPVT+RSRGFGFIT+ E VD+ +
Sbjct: 227 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 286
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 287 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSADEVKAYFSQFGAVEETVM 345
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 346 LMDQQTKRHRGFGFVTFENEDVVDRV 371
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ D +KA+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 314 KKIFVGGVSQDTSADEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 373
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 374 IHFHTIKNKKVECKKAQPKEA 394
>gi|442621132|ref|NP_001262959.1| musashi, isoform E [Drosophila melanogaster]
gi|440217892|gb|AGB96339.1| musashi, isoform E [Drosophila melanogaster]
Length = 618
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ D LK +F +G + DV++MKDPVT+RSRGFGFIT+ E V++ +
Sbjct: 188 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 247
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 248 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVM 306
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 307 LMDQQTKRHRGFGFVTFENEDVVDRV 332
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ + +KA+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 275 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 334
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 335 IHFHTIKNKKVECKKAQPKEA 355
>gi|17864096|ref|NP_524577.1| musashi, isoform A [Drosophila melanogaster]
gi|541667|emb|CAA55897.1| musashi [Drosophila melanogaster]
gi|15291915|gb|AAK93226.1| LD31631p [Drosophila melanogaster]
gi|23172305|gb|AAF56478.2| musashi, isoform A [Drosophila melanogaster]
Length = 606
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ D LK +F +G + DV++MKDPVT+RSRGFGFIT+ E V++ +
Sbjct: 176 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 235
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 236 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVM 294
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 295 LMDQQTKRHRGFGFVTFENEDVVDRV 320
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ + +KA+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 263 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 322
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 323 IHFHTIKNKKVECKKAQPKEA 343
>gi|148705158|gb|EDL37105.1| mCG15001 [Mus musculus]
Length = 132
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 67/85 (78%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+S ++ FEQWG + D V M+DP TKRSRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLSFATADESQRSHFEQWGVLTDCVGMRDPNTKRSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE 123
D AM+ RPH++DGRVVE KRAV RE
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSRE 93
>gi|220942596|gb|ACL83841.1| msi-PA [synthetic construct]
Length = 607
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ D LK +F +G + DV++MKDPVT+RSRGFGFIT+ E V++ +
Sbjct: 176 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 235
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 236 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVM 294
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 295 LMDQQTKRHRGFGFVTFENEDVVDRV 320
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ + +KA+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 263 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 322
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 323 IHFHTIKNKKVECKKAQPKEA 343
>gi|321475556|gb|EFX86518.1| hypothetical protein DAPPUDRAFT_44313 [Daphnia pulex]
Length = 195
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 96/156 (61%), Gaps = 14/156 (8%)
Query: 38 SEPESL--RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
S P L KLF+GGL ++T+ D L+ +F Q+G I+DV V+KDP+T+RSRGFGFIT++E+
Sbjct: 15 STPTDLPHNKLFVGGLSWQTSADKLREYFGQYGTIIDVQVLKDPLTQRSRGFGFITFAEA 74
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVP------------REVKVRRVTKVQIALEQMDYFG 143
VD ++ H +DG+ ++ K A P ++V V V++ A E YF
Sbjct: 75 SSVDRVLAVPAHTLDGKKIDPKHATPKNKGKATPSSKTKKVFVGGVSQDTSADEVKAYFN 134
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
Q+G +E M+ +++T RGF F+ F+ DVVD+I
Sbjct: 135 QFGRVEEAVMLMDQQTKRHRGFGFVTFESEDVVDRI 170
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ D +KA+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 113 KKVFVGGVSQDTSADEVKAYFNQFGRVEEAVMLMDQQTKRHRGFGFVTFESEDVVDRICE 172
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 173 IHYHTIKNKKVECKKAQPKEA 193
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YFGQYGTI V ++ + T RGF FI F + VD+++
Sbjct: 41 EYFGQYGTIIDVQVLKDPLTQRSRGFGFITFAEASSVDRVL 81
>gi|324514688|gb|ADY45952.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 448
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 120/252 (47%), Gaps = 50/252 (19%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P LRKLFIGGL + T D+ L+ F+ QWG +VD +V++DP TK SRGFGF+T++ +M +
Sbjct: 138 PPQLRKLFIGGLSHETTDEQLRLFYSQWGNVVDCIVIRDPQTKYSRGFGFVTFATMQMAE 197
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRRVTK-------------VQIALEQM------- 139
AM++RPH I+ +VV+ KRA+PRE + +++L +
Sbjct: 198 AAMADRPHTINNKVVDPKRAIPREQMSPMLPNHPPPFLEGEPDPGCKLSLSGIHWEYHTV 257
Query: 140 ----DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL------EV 189
YF +G +E V ++ N RGF F+ F++ D+ + V + EV
Sbjct: 258 DVLRHYFDTFGVVEQVEILGN-----PRGFGFVVFEEKSAADRCLAHGKVHMINGRNCEV 312
Query: 190 DQEVINGEDHRTHGTHQEAKVDGVTTTNQTHGTIREVVGMDNSKVVAGEIKEV--GVVSL 247
Q I H +Q + G ++ VG D + A E+ VV
Sbjct: 313 TQNPIQ------HSVYQRVEARGDDSS-------EAAVGDDENATSARVTPEIVPPVVQK 359
Query: 248 VVDGVVAKVATV 259
+VD + +T
Sbjct: 360 IVDAAITDSSTT 371
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 39 EPESLRKLFIGGLDYRTND-DSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
EP+ KL + G+ + + D L+ +F+ +G + V ++ +P RGFGF+ + E
Sbjct: 238 EPDPGCKLSLSGIHWEYHTVDVLRHYFDTFGVVEQVEILGNP-----RGFGFVVFEEKSA 292
Query: 98 VDEAMSN-RPHEIDGRVVE 115
D +++ + H I+GR E
Sbjct: 293 ADRCLAHGKVHMINGRNCE 311
>gi|269914213|gb|ACZ52626.1| MIP15164p [Drosophila melanogaster]
Length = 578
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ D LK +F +G + DV++MKDPVT+RSRGFGFIT+ E V++ +
Sbjct: 148 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 207
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 208 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVM 266
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 267 LMDQQTKRHRGFGFVTFENEDVVDRV 292
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
A ++ + +K+F+GG+ T+ + +KA+F Q+G + + V++ D TKR RGFGF+
Sbjct: 222 ATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFV 281
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV 124
T+ +VD H I + VE K+A P+E
Sbjct: 282 TFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 315
>gi|410915344|ref|XP_003971147.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Takifugu rubripes]
Length = 407
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 110/181 (60%), Gaps = 17/181 (9%)
Query: 25 AMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ + ++ DSQ K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRS
Sbjct: 6 SQATSGSLNDSQ----HDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRS 61
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------- 133
RGFGF+T++++ VD+ ++ + HE+D + ++ K A PR + + VT+ +
Sbjct: 62 RGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANT 121
Query: 134 IALEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEV 193
+ + YF Q+G ++ ++ +K T RGF FI F++ D+V+K+ ++ E++ ++
Sbjct: 122 VVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVC--EIHFHEINNKM 179
Query: 194 I 194
+
Sbjct: 180 V 180
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGFIT+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|17554332|ref|NP_497799.1| Protein MSI-1 [Caenorhabditis elegans]
gi|10047307|dbj|BAB13470.1| neural RNA-binding protein MSI-1 [Caenorhabditis elegans]
gi|18376536|emb|CAA84667.2| Protein MSI-1 [Caenorhabditis elegans]
Length = 320
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 98/164 (59%), Gaps = 18/164 (10%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T ++L+ +F ++GE+ + +VM+DP TKR+RGFGFIT+ + VD+ ++N
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM-DYFGQYGTIESVNM 153
R HE+DG+ ++ K A P+ + + VTK + LE M YF YG +E +
Sbjct: 106 REHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAML 165
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGE 197
+ +K T RGF F+ FD +V DK V E+ ING+
Sbjct: 166 MFDKATQRHRGFGFVTFDSDEVADK-------VCEIHFHEINGK 202
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 55/81 (67%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+FIGGL + + +K +FE +G++ D ++M D T+R RGFGF+T+ ++ D+
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+G++VE K+A P+EV
Sbjct: 194 IHFHEINGKMVECKKAQPKEV 214
>gi|442621136|ref|NP_001262961.1| musashi, isoform H [Drosophila melanogaster]
gi|440217894|gb|AGB96341.1| musashi, isoform H [Drosophila melanogaster]
Length = 567
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ D LK +F +G + DV++MKDPVT+RSRGFGFIT+ E V++ +
Sbjct: 137 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 196
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 197 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVM 255
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 256 LMDQQTKRHRGFGFVTFENEDVVDRV 281
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
A ++ + +K+F+GG+ T+ + +KA+F Q+G + + V++ D TKR RGFGF+
Sbjct: 211 ATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFV 270
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV 124
T+ +VD H I + VE K+A P+E
Sbjct: 271 TFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 304
>gi|345322713|ref|XP_001506312.2| PREDICTED: RNA-binding protein Musashi homolog 2-like
[Ornithorhynchus anatinus]
Length = 251
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 94/149 (63%), Gaps = 11/149 (7%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+
Sbjct: 15 SSSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 74
Query: 102 MSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIES 150
++ HE+D + ++ K A PR + + VT+ + + + YF Q+G +E
Sbjct: 75 LAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVED 134
Query: 151 VNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
++ +K T RGF F+ F++ DVV+K+
Sbjct: 135 AMLMFDKTTNRHRGFGFVTFENEDVVEKV 163
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 166 IHFHEINNKMVECKKAQPKEV 186
>gi|410915342|ref|XP_003971146.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Takifugu rubripes]
Length = 388
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 110/181 (60%), Gaps = 17/181 (9%)
Query: 25 AMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ + ++ DSQ K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRS
Sbjct: 6 SQATSGSLNDSQ----HDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRS 61
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------- 133
RGFGF+T++++ VD+ ++ + HE+D + ++ K A PR + + VT+ +
Sbjct: 62 RGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANT 121
Query: 134 IALEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEV 193
+ + YF Q+G ++ ++ +K T RGF FI F++ D+V+K+ ++ E++ ++
Sbjct: 122 VVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVC--EIHFHEINNKM 179
Query: 194 I 194
+
Sbjct: 180 V 180
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGFIT+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|194908488|ref|XP_001981778.1| GG11413 [Drosophila erecta]
gi|190656416|gb|EDV53648.1| GG11413 [Drosophila erecta]
Length = 635
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ D LK +F +G + DV++MKDPVT+RSRGFGFIT+ E V++ +
Sbjct: 205 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 264
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 265 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVM 323
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 324 LMDQQTKRHRGFGFVTFENEDVVDRV 349
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ + +KA+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 292 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 351
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 352 IHFHTIKNKKVECKKAQPKEA 372
>gi|410914421|ref|XP_003970686.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Takifugu rubripes]
Length = 300
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 93/155 (60%), Gaps = 13/155 (8%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+L KLF+GGL+ +TND+ L+ +FE++G++ D VV+ + RSR FGFITYS + D A
Sbjct: 4 ALTKLFVGGLNVQTNDEGLRQYFEKYGQLSDCVVVMNNQLGRSRCFGFITYSTPEEADTA 63
Query: 102 MSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQM---DYFGQYGTI 148
M+ PH +DG VE KRAV R+ VK V VQ +E DYF Q+G +
Sbjct: 64 MAASPHVVDGHNVELKRAVARQDADNPEVLANVKKIFVGGVQDHIEAQHLTDYFSQFGAV 123
Query: 149 ESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
E ++++K TG KRGF F+ F D D K VL +
Sbjct: 124 EKAEIISDKLTGKKRGFGFVFFVDTDSATKAVLTR 158
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 28 INKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ +A+ PE L +K+F+GG+ L +F Q+G + ++ D +T +
Sbjct: 78 LKRAVARQDADNPEVLANVKKIFVGGVQDHIEAQHLTDYFSQFGAVEKAEIISDKLTGKK 137
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGFGF+ + ++ +A+ R H I G VE K+A+ ++
Sbjct: 138 RGFGFVFFVDTDSATKAVLTRYHTISGNKVEAKKAMTKQ 176
>gi|41056104|ref|NP_957403.1| musashi homolog 2 [Danio rerio]
gi|32822918|gb|AAH55251.1| Musashi homolog 2b (Drosophila) [Danio rerio]
Length = 408
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 102/161 (63%), Gaps = 13/161 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T++++ VD+ ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 141
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
+ +K T RGF F+ F++ DVV+K+ ++ E++ +++
Sbjct: 142 MFDKTTNRHRGFGFVTFENEDVVEKVC--EIHFHEINNKMV 180
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|195504299|ref|XP_002099019.1| GE23609 [Drosophila yakuba]
gi|194185120|gb|EDW98731.1| GE23609 [Drosophila yakuba]
Length = 637
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ D LK +F +G + DV++MKDPVT+RSRGFGFIT+ E V++ +
Sbjct: 207 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKV 266
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 267 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVM 325
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 326 LMDQQTKRHRGFGFVTFENEDVVDRV 351
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ + +KA+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 294 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 353
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 354 IHFHTIKNKKVECKKAQPKEA 374
>gi|194741664|ref|XP_001953309.1| GF17697 [Drosophila ananassae]
gi|190626368|gb|EDV41892.1| GF17697 [Drosophila ananassae]
Length = 634
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 89/146 (60%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ D LK +F +G + DV++MKDPVT+RSRGFGFIT+ E V + +
Sbjct: 206 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVQKVLKV 265
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 266 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVM 324
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 325 LMDQQTKRHRGFGFVTFENEDVVDRV 350
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ + +KA+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 293 KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 352
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 353 IHFHTIKNKKVECKKAQPKEA 373
>gi|195453885|ref|XP_002073986.1| GK12850 [Drosophila willistoni]
gi|194170071|gb|EDW84972.1| GK12850 [Drosophila willistoni]
Length = 641
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ + LK +F +G + DV++MKDPVT+RSRGFGFIT+ E VD+ +
Sbjct: 200 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKVLKV 259
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 260 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSADEVKAYFSQFGPVEETVM 318
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 319 LMDQQTKRHRGFGFVTFENEDVVDRV 344
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
A ++ + +K+F+GG+ T+ D +KA+F Q+G + + V++ D TKR RGFGF+
Sbjct: 274 ATPKNRPRQANKTKKIFVGGVSQDTSADEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFV 333
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV 124
T+ +VD H I + VE K+A P+E
Sbjct: 334 TFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 367
>gi|410915348|ref|XP_003971149.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 4
[Takifugu rubripes]
Length = 350
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 100/160 (62%), Gaps = 15/160 (9%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
++ DSQ K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+
Sbjct: 12 SLNDSQ----HDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFV 67
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQM 139
T++++ VD+ ++ + HE+D + ++ K A PR + + VT+ + + +
Sbjct: 68 TFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVK 127
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
YF Q+G ++ ++ +K T RGF FI F++ D+V+K+
Sbjct: 128 QYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKV 167
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGFIT+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|159163526|pdb|1X4B|A Chain A, Solution Structure Of Rrm Domain In Heterogeneous Nuclear
Ribonucleaoproteins A2B1
Length = 116
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 66/85 (77%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLFIGGL + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 23 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 82
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE 123
D AM+ RPH IDGRVVE KRAV RE
Sbjct: 83 DAAMAARPHSIDGRVVEPKRAVARE 107
>gi|395531900|ref|XP_003768011.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Sarcophilus
harrisii]
Length = 345
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 93/147 (63%), Gaps = 11/147 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ ++
Sbjct: 21 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 80
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 81 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 140
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIV 180
+ +K T RGF F+ F++ DVV+K+
Sbjct: 141 MFDKTTNRHRGFGFVTFENEDVVEKVC 167
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMFPPGTR 196
>gi|449479911|ref|XP_004177058.1| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 2
[Taeniopygia guttata]
Length = 251
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 93/146 (63%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ ++
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 77
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 78 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 137
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +K T RGF F+ F++ DVV+K+
Sbjct: 138 MFDKTTNRHRGFGFVTFENEDVVEKV 163
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 166 IHFHEINNKMVECKKAQPKEV 186
>gi|213513574|ref|NP_001133787.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
gi|209155330|gb|ACI33897.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
Length = 366
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 100/166 (60%), Gaps = 15/166 (9%)
Query: 25 AMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ + + + DSQ K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRS
Sbjct: 6 SQVTSGSPNDSQ----HDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRS 61
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------- 133
RGFGF+T++++ VD+ ++ HE+D + ++ K A PR + + VT+ +
Sbjct: 62 RGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANT 121
Query: 134 IALEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ + YF Q+G +E ++ +K T RGF FI F+ DVV+K+
Sbjct: 122 VVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFITFEGEDVVEKV 167
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGFIT+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFITFEGEDVVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|320581591|gb|EFW95811.1| Subunit of cleavage factor I [Ogataea parapolymorpha DL-1]
Length = 431
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 96/150 (64%), Gaps = 8/150 (5%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T ++S+K +F Q+G+++D+ +MKD T RSRGFGF+T++ S VDE +
Sbjct: 107 KMFIGGLNWETTEESMKNYFSQFGDVIDLTIMKDNATGRSRGFGFLTFASSSSVDEVLK- 165
Query: 105 RPHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNK 157
+ H +DG++++ KRA+P+E + V V E +YF Q+G I ++ +K
Sbjct: 166 KTHVLDGKLIDPKRAIPKEEQDKTGKIFVGGVAPEVTEAEFTEYFQQFGNIIDSQLMLDK 225
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+TG RG+ F+ +D D VD++ +K V+
Sbjct: 226 DTGRSRGYGFVTYDSPDAVDRVTQNKYVLF 255
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + +F+Q+G I+D +M D T RSRG+GF+TY VD N
Sbjct: 191 KIFVGGVAPEVTEAEFTEYFQQFGNIIDSQLMLDKDTGRSRGYGFVTYDSPDAVDRVTQN 250
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMDY 141
+ G+ +E KRA PR + + I Q Y
Sbjct: 251 KYVLFHGKNMEIKRAEPRNQQKAGSSYSNIGQPQQTY 287
>gi|348511819|ref|XP_003443441.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Oreochromis niloticus]
Length = 317
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/154 (41%), Positives = 93/154 (60%), Gaps = 13/154 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLF+GGL+ T D+ L+ +FEQ+G + D VV+ + RSR FGFITYS + D AM
Sbjct: 32 LCKLFVGGLNVETTDEGLRKYFEQYGTLSDCVVVMNQQLGRSRCFGFITYSTPEEADAAM 91
Query: 103 SNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGTIE 149
+ +PH ++G VE KRA+ RE V+++ K I E + +YF Q+G +E
Sbjct: 92 AAKPHVVEGNNVEVKRAIAREDANNPDILANVKKIFVGGVKDHIVEENLTEYFSQFGAVE 151
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
++++K+TG KRGF F+ F+D D K VL K
Sbjct: 152 KAEIISDKQTGRKRGFGFVFFEDTDSATKAVLTK 185
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 28 INKAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ +A+ + P+ +++K+F+GG+ +++L +F Q+G + ++ D T R
Sbjct: 105 VKRAIAREDANNPDILANVKKIFVGGVKDHIVEENLTEYFSQFGAVEKAEIISDKQTGRK 164
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGFGF+ + ++ +A+ + H I+G VE K+A+ ++
Sbjct: 165 RGFGFVFFEDTDSATKAVLTKYHTINGNKVEVKKALTKQ 203
>gi|351700354|gb|EHB03273.1| Heterogeneous nuclear ribonucleoprotein A0 [Heterocephalus glaber]
Length = 176
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 96/165 (58%), Gaps = 22/165 (13%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ ++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQS---GLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 51
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 52 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 111
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+GT+E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 112 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 156
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 69 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 126
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVE 115
+ D + + RGFGF+ + D+A + H I G VE
Sbjct: 127 IADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE 166
>gi|312095606|ref|XP_003148410.1| hypothetical protein LOAG_12851 [Loa loa]
Length = 233
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 31/171 (18%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
+S+C P RKLFIGGL + T D+ L+ ++ QWG +VD +V++DP TK SRGFGF+T++
Sbjct: 54 NSEC--PPQPRKLFIGGLSHETTDEQLRQYYSQWGTVVDCIVIRDPQTKYSRGFGFVTFA 111
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR--------------------RVTKVQ 133
+M + AM++RPH I+ +VV+ KRA+PRE ++ +
Sbjct: 112 TIQMAEAAMADRPHTINNKVVDPKRAIPREQMSPLLPNHPPSFLEIEPDPGCKLSLSGIH 171
Query: 134 IALEQMD----YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
A +D YF +GT+E V ++ G RG F+ F+ DK +
Sbjct: 172 WAWHTVDDLRQYFDNFGTVEQVEIL-----GNPRGLGFVVFESKPSADKCL 217
>gi|403213324|emb|CCK67826.1| hypothetical protein KNAG_0A01370 [Kazachstania naganishii CBS
8797]
Length = 545
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 98/155 (63%), Gaps = 10/155 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D L+ +F ++G ++D+ +MKDP + RSRGFGF+T+ E VDE +
Sbjct: 158 KMFIGGLNWETTEDGLREYFNKYGHVIDLKIMKDPNSGRSRGFGFLTFEEPSSVDEVVKT 217
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KR++PRE + + K+ + E ++F QYGTI ++ +
Sbjct: 218 Q-HILDGKVIDPKRSIPREEQ-DKTGKIFVGGIGADVRPKEFEEFFSQYGTIIDAQLMLD 275
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
K+TG RGF F+ +D + VD++ +K + + Q
Sbjct: 276 KDTGRSRGFGFVTYDSPEAVDRVCQNKYIDFKGKQ 310
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF Q+G I+D +M D T RSRGFGF+TY + VD N
Sbjct: 242 KIFVGGIGADVRPKEFEEFFSQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPEAVDRVCQN 301
Query: 105 RPHEIDGRVVETKRAVPREVK 125
+ + G+ +E KRA PR ++
Sbjct: 302 KYIDFKGKQIEIKRAEPRHMQ 322
>gi|348508132|ref|XP_003441609.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Oreochromis niloticus]
Length = 363
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 95/153 (62%), Gaps = 11/153 (7%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
+ P K+FIGGL ++T + LK +F ++GE+ + +VM+DPVTKRSRGFGF+TY+E
Sbjct: 16 NSPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAG 75
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYG 146
V++ ++ HE+D + ++ K A PR + + VT+ V +E + YF Q+G
Sbjct: 76 VEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFG 135
Query: 147 TIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
++ ++ +K T RGF F+ F++ DVV+K+
Sbjct: 136 KVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKV 168
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 111 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 171 IHFHEINNKMVECKKAQPKEV 191
>gi|47086453|ref|NP_997961.1| musashi homolog 2a [Danio rerio]
gi|28374420|gb|AAH45335.1| Musashi homolog 2a (Drosophila) [Danio rerio]
gi|182889228|gb|AAI64813.1| Msi2 protein [Danio rerio]
Length = 388
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 109/181 (60%), Gaps = 17/181 (9%)
Query: 25 AMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ + + ++ DSQ K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRS
Sbjct: 6 SQVTSGSLNDSQ----HDPGKMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRS 61
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ----------- 133
RGFGFIT+++ VD+ ++ HE+D + ++ K A PR + + VT+ +
Sbjct: 62 RGFGFITFADVSSVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAST 121
Query: 134 IALEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEV 193
+ + YF Q+G +E ++ +K T RGF F+ F++ D+V+K+ ++ E++ ++
Sbjct: 122 VVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEKVC--EIHFHEINNKM 179
Query: 194 I 194
+
Sbjct: 180 V 180
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 110 KKIFVGGLSASTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDIVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|194901404|ref|XP_001980242.1| GG17034 [Drosophila erecta]
gi|190651945|gb|EDV49200.1| GG17034 [Drosophila erecta]
Length = 427
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 26/166 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E LRK+F+GGL +T D+L+ FF Q+G + D VVM+DP+T SRGFGF+TY + K ++
Sbjct: 29 EHLRKIFVGGLSTQTTMDTLREFFSQFGSVADAVVMRDPITNHSRGFGFVTYVDPKSIEI 88
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVR------------------RVTKVQI-ALEQM-- 139
RPH ID + VETK A+PR R + K+ I L+
Sbjct: 89 VQRARPHTIDNKAVETKPALPRHEFNRGGGVGSILGGCGVGAGFVKSNKIFIGGLKDFHD 148
Query: 140 -----DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF Q+G + ++ + +K+TG KRGF F+EF D +K +
Sbjct: 149 EKTVREYFSQFGAVATMELFMDKDTGRKRGFGFLEFQDPSSTEKAL 194
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++ +++ +F Q+G + + + D T R RGFGF+ + + ++A++
Sbjct: 137 KIFIGGLKDFHDEKTVREYFSQFGAVATMELFMDKDTGRKRGFGFLEFQDPSSTEKALAQ 196
Query: 105 RPHEIDGRVVETKRAVPREVKVRRV 129
H I +VE KR+ + +R+
Sbjct: 197 GKHSILQTLVEVKRSTQKPHPGKRL 221
>gi|393912245|gb|EJD76653.1| musashi [Loa loa]
Length = 336
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 99/164 (60%), Gaps = 18/164 (10%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T + L+ +F ++GE+ + +VM+DP TKR+RGFGFIT+++ VD+ ++
Sbjct: 31 KMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFTDPASVDKVLAQ 90
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM-DYFGQYGTIESVNM 153
HE+DG+ ++ K A P++ + + + K + LE M +YF QYG +E +
Sbjct: 91 ELHELDGKKIDPKVAFPKKAQSKMIIKTKKVFIGGLSATSTLEDMKNYFEQYGKVEDAML 150
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGE 197
+ +K T RGF FI FD+ DV DK V E+ ING+
Sbjct: 151 MFDKTTQRHRGFGFITFDNDDVSDK-------VCEIHFHEINGK 187
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 55/81 (67%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+FIGGL + + +K +FEQ+G++ D ++M D T+R RGFGFIT+ + D+
Sbjct: 119 KKVFIGGLSATSTLEDMKNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDNDDVSDKVCE 178
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+G++VE K+A P+EV
Sbjct: 179 IHFHEINGKMVECKKAQPKEV 199
>gi|340378651|ref|XP_003387841.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Amphimedon queenslandica]
Length = 409
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 91/150 (60%), Gaps = 16/150 (10%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL RT + L+ ++ +WGE++D VVMKDP T R RGFGFITY+ + V+ ++
Sbjct: 1 MFIGGLTLRTTKEMLEDYYCRWGEVIDSVVMKDPQTNRPRGFGFITYTSPESVERCLAEG 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKVQIALEQM---------------DYFGQYGTIES 150
PHEID R+VETKRAVPRE + R+ + ++M Y+GQ+G I
Sbjct: 61 PHEIDERIVETKRAVPRE-ETRQEPEPSSKSKKMFIGGLTTSATKDKLERYYGQWGMIID 119
Query: 151 VNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+VT+ +T RGF F+ ++ + V+K +
Sbjct: 120 AAVVTDPQTRRSRGFGFVTYNSRESVEKCL 149
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 93/162 (57%), Gaps = 15/162 (9%)
Query: 33 EDSQCSEPES-LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
E Q EP S +K+FIGGL D L+ ++ QWG I+D V+ DP T+RSRGFGF+T
Sbjct: 79 ETRQEPEPSSKSKKMFIGGLTTSATKDKLERYYGQWGMIIDAAVVTDPQTRRSRGFGFVT 138
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPRE---------VKVRRVTKVQIAL-----E 137
Y+ + V++ ++ PH ID R+VETK+AVPRE K ++V + L E
Sbjct: 139 YNSRESVEKCLAAGPHYIDERLVETKKAVPREETPKETDPSSKSKKVFLGGLHLDTTKEE 198
Query: 138 QMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
M+ G IE V+++ + E RGF FI F DY+ +++
Sbjct: 199 LMEAAKHIGEIEEVSLIIDPERNKPRGFGFITFTDYESAERL 240
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 33 EDSQCSEPES-LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
E + ++P S +K+F+GGL T + L + GEI +V ++ DP + RGFGFIT
Sbjct: 171 ETPKETDPSSKSKKVFLGGLHLDTTKEELMEAAKHIGEIEEVSLIIDPERNKPRGFGFIT 230
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAV 120
+++ + + + I R VETK+AV
Sbjct: 231 FTDYESAERLCNQGILRIRDRDVETKKAV 259
>gi|255717440|ref|XP_002555001.1| KLTH0F18766p [Lachancea thermotolerans]
gi|238936384|emb|CAR24564.1| KLTH0F18766p [Lachancea thermotolerans CBS 6340]
Length = 588
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 99/152 (65%), Gaps = 10/152 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D+LK +F ++G++ D+ +M+D T RSRGFGF+T++E+ VDE +
Sbjct: 209 KMFIGGLNWETTEDNLKDYFSKYGQVTDLKIMRDNATGRSRGFGFLTFAEASSVDEVVKT 268
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PRE + + K+ + E ++F Q+GTI ++ +
Sbjct: 269 Q-HILDGKVIDPKRAIPREEQD-KTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLD 326
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
K+TG RGF FI +D D VD++ +K + +
Sbjct: 327 KDTGRSRGFGFITYDTPDAVDRVCENKFIEFK 358
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T RSRGFGFITY VD N
Sbjct: 293 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGRSRGFGFITYDTPDAVDRVCEN 352
Query: 105 RPHEIDGRVVETKRAVPREV 124
+ E G+ +E KRA PR +
Sbjct: 353 KFIEFKGKRIEIKRAEPRHL 372
>gi|317419099|emb|CBN81137.1| RNA-binding protein Musashi homolog 1 [Dicentrarchus labrax]
Length = 362
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 95/154 (61%), Gaps = 11/154 (7%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
+ P K+FIGGL ++T + LK +F ++GE+ + +VM+DPVTKRSRGFGF+TY+E
Sbjct: 16 NSPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAG 75
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYG 146
V++ ++ HE+D + ++ K A PR + + VT+ V +E + YF Q+G
Sbjct: 76 VEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFG 135
Query: 147 TIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
++ ++ +K T RGF F+ F++ DVV+K+
Sbjct: 136 KVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVC 169
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 111 KKIFVGGLSVNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 171 IHFHEINNKMVECKKAQPKEV 191
>gi|410915346|ref|XP_003971148.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Takifugu rubripes]
Length = 328
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 100/160 (62%), Gaps = 15/160 (9%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
++ DSQ K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+
Sbjct: 12 SLNDSQ----HDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFV 67
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQM 139
T++++ VD+ ++ + HE+D + ++ K A PR + + VT+ + + +
Sbjct: 68 TFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVK 127
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
YF Q+G ++ ++ +K T RGF FI F++ D+V+K+
Sbjct: 128 QYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKV 167
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGFIT+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFENEDIVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|209148043|gb|ACI32918.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 300
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 96/152 (63%), Gaps = 13/152 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLF+GGL+ T DD L+ FEQ+G++ D VV+++ +RSR FGF+TYS ++ D AM
Sbjct: 5 LCKLFVGGLNVETTDDGLRQHFEQYGQLTDCVVVQNQQLQRSRCFGFVTYSSAEEADAAM 64
Query: 103 SNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGTIE 149
+ RPH +DG VE KRAV RE KV+++ K I E + DYF Q+G IE
Sbjct: 65 AARPHVVDGTNVELKRAVAREDAGRPEALAKVKKIFIGGLKDDIEDEHLNDYFSQFGAIE 124
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
++++KET KRGF F+ F+D D DK V+
Sbjct: 125 KAEVISDKETFKKRGFGFVYFEDNDSADKAVV 156
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDV 73
V GT V L + A ED+ PE+L +K+FIGGL D+ L +F Q+G I
Sbjct: 71 VDGTNVELKRAV--AREDA--GRPEALAKVKKIFIGGLKDDIEDEHLNDYFSQFGAIEKA 126
Query: 74 VVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
V+ D T + RGFGF+ + ++ D+A+ + H I+G VE K+A+ ++
Sbjct: 127 EVISDKETFKKRGFGFVYFEDNDSADKAVVLKFHTINGHKVEVKKALTKQ 176
>gi|354472023|ref|XP_003498240.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cricetulus
griseus]
Length = 343
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 92/146 (63%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 78 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 137
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +K T RGF F+ F++ DVV+K+
Sbjct: 138 MFDKTTNRHRGFGFVTFENEDVVEKV 163
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 166 IHFHEINNKMVECKKAQPKEVMFPPGTR 193
>gi|198453793|ref|XP_002137742.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
gi|198132515|gb|EDY68300.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
Length = 643
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ D LK +F +G + DV++MKDPVT+RSRGFGFIT+ + V++ +
Sbjct: 211 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQDPCTVEKVLKV 270
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + R+ K + A E YF Q+G +E M
Sbjct: 271 PIHTLDGKKIDPKHATPKN-RPRQANKTKKIFVGGVSQDTSAEEVKAYFAQFGPVEETVM 329
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 330 LMDQQTKRHRGFGFVTFENEDVVDRV 355
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ + +KA+F Q+G + + V++ D TKR RGFGF+T+ +VD
Sbjct: 298 KKIFVGGVSQDTSAEEVKAYFAQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 357
Query: 104 NRPHEIDGRVVETKRAVPRE 123
H I + VE K+A P+E
Sbjct: 358 IHFHTIKNKKVECKKAQPKE 377
>gi|367014029|ref|XP_003681514.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
gi|359749175|emb|CCE92303.1| hypothetical protein TDEL_0E00600 [Torulaspora delbrueckii]
Length = 547
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 97/149 (65%), Gaps = 10/149 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D+L+ +F ++G+++D+ +MKD T RSRGFGF+T+ E VDE +
Sbjct: 158 KMFIGGLNWETTEDTLRDYFSKYGKVIDLKIMKDTNTGRSRGFGFLTFDEPSSVDEVVKT 217
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PRE + + K+ + E ++F Q+GTI ++ +
Sbjct: 218 Q-HILDGKVIDPKRAIPREEQ-DKTGKIFVGGIGADVRPKEFEEFFAQWGTIIDAQLMLD 275
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
K+TG RGF F+ +D D VD++ +K +
Sbjct: 276 KDTGRSRGFGFVTYDSPDAVDRVCQNKFI 304
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T RSRGFGF+TY VD N
Sbjct: 242 KIFVGGIGADVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQN 301
Query: 105 RPHEIDGRVVETKRAVPREVKVRR 128
+ + G+ +E KRA PR ++ ++
Sbjct: 302 KFIDFKGKKIEIKRAEPRHMQKQQ 325
>gi|170585802|ref|XP_001897671.1| heterogeneous nuclear ribonucleoprotein A1,putative [Brugia malayi]
gi|158594978|gb|EDP33555.1| heterogeneous nuclear ribonucleoprotein A1,putative [Brugia malayi]
Length = 355
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 31/171 (18%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
+S+C P RKLFIGGL + T D+ L+ ++ QWG +VD +V++DP TK SRGFGF+T++
Sbjct: 44 NSEC--PPQPRKLFIGGLSHETTDEQLRQYYSQWGTVVDCIVIRDPQTKYSRGFGFVTFA 101
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR--------------------RVTKVQ 133
+M + AM++RPH I+ +VV+ KRA+PRE ++ +
Sbjct: 102 TIQMAEAAMADRPHTINNKVVDPKRAIPREQMSPLLPNHPPSFLEIEPDPGCKLSLSGIH 161
Query: 134 IALEQMD----YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
A +D YF +GT+E V ++ G RG F+ F++ DK +
Sbjct: 162 WAWHTVDDLRQYFDNFGTVEQVEIL-----GNPRGLGFVVFENKSSADKCL 207
>gi|444719973|gb|ELW60761.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 183
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 89/146 (60%), Gaps = 13/146 (8%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E KLFIG L + T ++SL+ ++EQWG++ D VVM+DP +KRSRGFGF+T+S V
Sbjct: 4 EKEQFCKLFIGDLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEV 63
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA----------LEQM---DYFGQY 145
D AM+ RPH IDG+VVE K AV RE + T V + E+ DYF +Y
Sbjct: 64 DAAMAARPHSIDGKVVEPKHAVAREESGKPGTHVTVKKLFAGGIKEDTEEHHFRDYFEEY 123
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFD 171
G I+++ ++T+++ + +E D
Sbjct: 124 GKIDTIKIITDQKVTLEEDLMDMEVD 149
>gi|25121993|ref|NP_733839.1| RNA-binding protein Musashi homolog 2 isoform b [Homo sapiens]
gi|332848594|ref|XP_003315679.1| PREDICTED: uncharacterized protein LOC748578 [Pan troglodytes]
gi|426347417|ref|XP_004041349.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Gorilla gorilla
gorilla]
gi|21752839|dbj|BAC04244.1| unnamed protein product [Homo sapiens]
gi|119614916|gb|EAW94510.1| musashi homolog 2 (Drosophila), isoform CRA_e [Homo sapiens]
Length = 251
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 92/146 (63%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 78 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 137
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +K T RGF F+ F++ DVV+K+
Sbjct: 138 MFDKTTNRHRGFGFVTFENEDVVEKV 163
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 166 IHFHEINNKMVECKKAQPKEV 186
>gi|326928626|ref|XP_003210477.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Meleagris gallopavo]
Length = 190
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 95/165 (57%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T + L+ F +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTTEAGLREHFAAYGTLTDCVVVLNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE + +V K+ + + D
Sbjct: 55 YSAVEEADAAMAASPHAVDGNSVELKRAVSREDSAKPGAHAKVKKLFVGGLKGDVGEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+F Q+G +E ++ +K++G KRGF F+ F ++D DK + K
Sbjct: 115 VQHFSQFGPVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 28 INKAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ +A+ ++P + ++KLF+GGL + L F Q+G + ++ D + +
Sbjct: 79 LKRAVSREDSAKPGAHAKVKKLFVGGLKGDVGEGDLVQHFSQFGPVEKAEIIADKQSGKK 138
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 139 RGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|268564135|ref|XP_002647098.1| C. briggsae CBR-MSI-1 protein [Caenorhabditis briggsae]
Length = 318
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 97/164 (59%), Gaps = 18/164 (10%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T ++L+ +F ++GE+ + +VM+DP TKR+RGFGFIT+ E VD+ ++
Sbjct: 43 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVEPSSVDKVLNA 102
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM-DYFGQYGTIESVNM 153
R HE+DG+ ++ K A P+ + + VTK + LE M YF YG +E +
Sbjct: 103 RDHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFESYGKVEDAML 162
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGE 197
+ +K T RGF F+ FD +V DK V E+ ING+
Sbjct: 163 MYDKATQRHRGFGFVTFDSDEVADK-------VCEIHFHEINGK 199
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 55/81 (67%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+FIGGL + + +K +FE +G++ D ++M D T+R RGFGF+T+ ++ D+
Sbjct: 131 KKVFIGGLSATSTLEDMKQYFESYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCE 190
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+G++VE K+A P+EV
Sbjct: 191 IHFHEINGKMVECKKAQPKEV 211
>gi|390331824|ref|XP_003723360.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like [Strongylocentrotus purpuratus]
Length = 360
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 97/165 (58%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
M + + EPE RKLF+GGL Y T +D++K +F Q+GEIVD V+KDP + +S+GFGF+T
Sbjct: 1 MSEGKYKEPEQERKLFLGGLSYNTKEDNIKEYFGQFGEIVDCCVIKDPTSLKSKGFGFVT 60
Query: 92 YSESKMVDEAMSNR---PHEIDGRVVETKRAVPREVK----------VRRVTKVQIALEQ 138
++ K V++ M R PH +D R V+ +RA+ R+ K V + K E
Sbjct: 61 FASRKEVNKVMGARKENPHRLDNRAVDVRRAMARDEKGPKNPSFKCFVGGIPKETTEEEL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YF Q+G I + + +K GF+FI +DD D VD+IV+ K
Sbjct: 121 RAYFSQFGQIVELALHLSK------GFSFITYDDTDCVDQIVMKK 159
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 25 AMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
A+ + +AM + K F+GG+ T ++ L+A+F Q+G+IV++ + S
Sbjct: 85 AVDVRRAMARDEKGPKNPSFKCFVGGIPKETTEEELRAYFSQFGQIVELALH------LS 138
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+GF FITY ++ VD+ + + H I+G+ VE K+A +E
Sbjct: 139 KGFSFITYDDTDCVDQIVMKKFHHINGKKVEGKKAYSKE 177
>gi|213623508|gb|AAI69841.1| Ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 100/161 (62%), Gaps = 13/161 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 81
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF QYG +E +
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQYGKVEDAML 141
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
+ +K T RGF F+ F+ DVV+K+ ++ E++ +++
Sbjct: 142 MFDKTTNRHRGFGFVTFEIEDVVEKVC--EIHFHEINNKMV 180
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|148225236|ref|NP_001084027.1| musashi RNA-binding protein 2 [Xenopus laevis]
gi|214936|gb|AAA50004.1| ribonucleoprotein [Xenopus laevis]
Length = 406
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 100/161 (62%), Gaps = 13/161 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 81
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF QYG +E +
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQYGKVEDAML 141
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
+ +K T RGF F+ F+ DVV+K+ ++ E++ +++
Sbjct: 142 MFDKTTNRHRGFGFVTFEIEDVVEKVC--EIHFHEINNKMV 180
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQYGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|301759651|ref|XP_002915684.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Ailuropoda
melanoleuca]
Length = 324
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 92/146 (63%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 78 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 137
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +K T RGF F+ F++ DVV+K+
Sbjct: 138 MFDKTTNRHRGFGFVTFENEDVVEKV 163
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 166 IHFHEINNKMVECKKAQPKEVMFPPGTR 193
>gi|296477081|tpg|DAA19196.1| TPA: musashi 2-like [Bos taurus]
Length = 324
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 92/146 (63%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 78 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 137
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +K T RGF F+ F++ DVV+K+
Sbjct: 138 MFDKTTNRHRGFGFVTFENEDVVEKV 163
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 166 IHFHEINNKMVECKKAQPKEVMFPPGTR 193
>gi|348508134|ref|XP_003441610.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Oreochromis niloticus]
Length = 351
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 95/153 (62%), Gaps = 11/153 (7%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
+ P K+FIGGL ++T + LK +F ++GE+ + +VM+DPVTKRSRGFGF+TY+E
Sbjct: 16 NSPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAG 75
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYG 146
V++ ++ HE+D + ++ K A PR + + VT+ V +E + YF Q+G
Sbjct: 76 VEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFG 135
Query: 147 TIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
++ ++ +K T RGF F+ F++ DVV+K+
Sbjct: 136 KVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKV 168
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 111 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 171 IHFHEINNKMVECKKAQPKEV 191
>gi|325179628|emb|CCA14026.1| heterogeneous nuclear ribonucleoprotein A1 putative [Albugo
laibachii Nc14]
Length = 618
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 90/175 (51%), Gaps = 34/175 (19%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L K+FIGGL Y T D+ L+++F +G + D VVMKDP+++RSRGFGFITY++ VD A+
Sbjct: 7 LGKIFIGGLSYETTDEKLRSYFGAFGSVTDAVVMKDPISRRSRGFGFITYADPACVDRAL 66
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------------------------- 135
+ H +D R VE KRAVPR R V I
Sbjct: 67 AQPSHVLDSRRVEAKRAVPRADNSREVVSTTIKPSGPIVLPTLNSACASGGATKKIFVGG 126
Query: 136 -------LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
E YF +YG + S ++ N+ET RGF F+ F++ VD I+ ++
Sbjct: 127 LHYETKDAEFKKYFQKYGKVVSAEVMFNRETNKSRGFGFVIFENEQSVDLILNER 181
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 81/145 (55%), Gaps = 5/145 (3%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVM 76
V+ T+ P I+ + +S C+ + +K+F+GGL Y T D K +F+++G++V VM
Sbjct: 94 VSTTIKPSGPIVLPTL-NSACASGGATKKIFVGGLHYETKDAEFKKYFQKYGKVVSAEVM 152
Query: 77 KDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIAL 136
+ T +SRGFGF+ + + VD ++ R H IDG++VE KRAVPR V ++
Sbjct: 153 FNRETNKSRGFGFVIFENEQSVDLILNERDHMIDGKLVEVKRAVPRT----DVPPIRAIP 208
Query: 137 EQMDYFGQYGTIESVNMVTNKETGA 161
+ G++ES N ++G+
Sbjct: 209 SRETPSSATGSVESNEDAVNLKSGS 233
>gi|17157989|ref|NP_473384.1| RNA-binding protein Musashi homolog 2 isoform 1 [Mus musculus]
gi|51316506|sp|Q920Q6.1|MSI2H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|15982562|dbj|BAB69485.1| RNA-binding protein Musashi2-L [Mus musculus]
gi|37619701|tpg|DAA01567.1| TPA_exp: RNA-binding protein [Mus musculus]
gi|74146912|dbj|BAE41407.1| unnamed protein product [Mus musculus]
gi|74150444|dbj|BAE32260.1| unnamed protein product [Mus musculus]
Length = 346
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 100/161 (62%), Gaps = 13/161 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 141
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
+ +K T RGF F+ F++ DVV+K+ ++ E++ +++
Sbjct: 142 MFDKTTNRHRGFGFVTFENEDVVEKVC--EIHFHEINNKMV 180
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|19111886|ref|NP_595094.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74676196|sp|O94432.1|YHKF_SCHPO RecName: Full=Uncharacterized RNA-binding protein C660.15
gi|4049514|emb|CAA22535.1| mRNA cleavage factor complex subunit (predicted)
[Schizosaccharomyces pombe]
Length = 474
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 95/151 (62%), Gaps = 10/151 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T DDSL+ +FEQ+GE++D VM+D T RSRGFGF+T+ K V+E MS
Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMS- 222
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG++++ KRA+PRE + + K+ + E ++F Q+G + ++ +
Sbjct: 223 KEHHLDGKIIDPKRAIPREEQ-EKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMD 281
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
K+TG RGF F+ +++ V+ + + +
Sbjct: 282 KDTGRPRGFGFVTYENESAVEATMSQPYITI 312
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ ++ + FF Q+G ++D +M D T R RGFGF+TY V
Sbjct: 242 EQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAV 301
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ MS I G+ VE KRA P+
Sbjct: 302 EATMSQPYITIHGKPVEVKRATPK 325
>gi|348508130|ref|XP_003441608.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Oreochromis niloticus]
Length = 332
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 95/153 (62%), Gaps = 11/153 (7%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
+ P K+FIGGL ++T + LK +F ++GE+ + +VM+DPVTKRSRGFGF+TY+E
Sbjct: 16 NSPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAG 75
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYG 146
V++ ++ HE+D + ++ K A PR + + VT+ V +E + YF Q+G
Sbjct: 76 VEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFG 135
Query: 147 TIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
++ ++ +K T RGF F+ F++ DVV+K+
Sbjct: 136 KVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKV 168
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 111 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 171 IHFHEINNKMVECKKAQPKEV 191
>gi|119614912|gb|EAW94506.1| musashi homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 346
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 92/146 (63%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 141
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +K T RGF F+ F++ DVV+K+
Sbjct: 142 MFDKTTNRHRGFGFVTFENEDVVEKV 167
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|157929888|gb|ABW04132.1| Hnrpa01 protein [Epinephelus coioides]
Length = 329
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 99/154 (64%), Gaps = 13/154 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLF+GGL+ +T +D L+ FEQ+G++ D VV+++ +RSR FGF+TYS ++ D AM
Sbjct: 10 LCKLFVGGLNVQTTNDGLRQHFEQYGQLTDCVVVQNQQLQRSRCFGFVTYSTAEEADAAM 69
Query: 103 SNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGTIE 149
+ RPH +DG VE KRAV RE KV+++ K + E + +YF QYG IE
Sbjct: 70 AARPHVVDGNNVELKRAVAREDAGRPEALAKVKKIFIGGLKDDVEDEHLHEYFSQYGVIE 129
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
++++K+TG KRGF F+ F+D D DK V+ K
Sbjct: 130 KAEVISDKQTGKKRGFGFVYFEDNDSADKAVVLK 163
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 28 INKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ +A+ PE+L +K+FIGGL D+ L +F Q+G I V+ D T +
Sbjct: 83 LKRAVAREDAGRPEALAKVKKIFIGGLKDDVEDEHLHEYFSQYGVIEKAEVISDKQTGKK 142
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGFGF+ + ++ D+A+ + H I+G VE K+A+ ++
Sbjct: 143 RGFGFVYFEDNDSADKAVVLKYHTINGHKVEVKKALTKQ 181
>gi|50286689|ref|XP_445774.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525080|emb|CAG58693.1| unnamed protein product [Candida glabrata]
Length = 452
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 96/149 (64%), Gaps = 10/149 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D L+ +F ++G++ ++ +MKDP T RSRGFGF+T+ + VDE +
Sbjct: 123 KMFIGGLNWETTEDGLRDYFSKYGKVEELKIMKDPATGRSRGFGFLTFESASSVDEVVKT 182
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PRE + + K+ + E ++F Q+GTI ++ +
Sbjct: 183 Q-HILDGKVIDPKRAIPREEQ-DKTGKIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLD 240
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
K+TG RGF FI +D D VDK+ +K +
Sbjct: 241 KDTGRSRGFGFITYDTPDAVDKVCQNKFI 269
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T RSRGFGFITY VD+ N
Sbjct: 207 KIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDTPDAVDKVCQN 266
Query: 105 RPHEIDGRVVETKRAVPREVK 125
+ + GR +E KRA PR ++
Sbjct: 267 KFIDFKGRKIEIKRAAPRHLQ 287
>gi|15982560|dbj|BAB69484.1| RNA-binding protein Musashi2-S [Mus musculus]
gi|26340376|dbj|BAC33851.1| unnamed protein product [Mus musculus]
gi|26340420|dbj|BAC33873.1| unnamed protein product [Mus musculus]
gi|85057100|gb|AAI11810.1| Msi2h protein [Mus musculus]
Length = 328
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 100/161 (62%), Gaps = 13/161 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 141
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
+ +K T RGF F+ F++ DVV+K+ ++ E++ +++
Sbjct: 142 MFDKTTNRHRGFGFVTFENEDVVEKVC--EIHFHEINNKMV 180
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|118097545|ref|XP_414620.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Gallus
gallus]
Length = 307
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 94/163 (57%), Gaps = 19/163 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T + L+ F +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTTEAGLREHFAAYGTLTDCVVVLNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE + +V K+ + + D
Sbjct: 55 YSAVEEADAAMAASPHAVDGNSVELKRAVSREDSAKPGAHAKVKKLFVGGLKGDVGEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
+F Q+G +E ++ +K++G KRGF F+ F ++D DK +
Sbjct: 115 VQHFSQFGPVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAV 157
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDV 73
V G V L +++ EDS ++P + ++KLF+GGL + L F Q+G +
Sbjct: 72 VDGNSVELKRAVSR--EDS--AKPGAHAKVKKLFVGGLKGDVGEGDLVQHFSQFGPVEKA 127
Query: 74 VVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
++ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 128 EIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|20373175|ref|NP_620412.1| RNA-binding protein Musashi homolog 2 isoform a [Homo sapiens]
gi|51316513|sp|Q96DH6.1|MSI2H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|16306702|gb|AAH01526.1| Musashi homolog 2 (Drosophila) [Homo sapiens]
gi|123983004|gb|ABM83243.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|123997687|gb|ABM86445.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|261861224|dbj|BAI47134.1| musashi homolog 2 [synthetic construct]
gi|380784487|gb|AFE64119.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|383415747|gb|AFH31087.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|384941194|gb|AFI34202.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|392583801|dbj|BAM24698.2| musashi homolog 2 [Sus scrofa]
gi|410219648|gb|JAA07043.1| musashi homolog 2 [Pan troglodytes]
gi|410258766|gb|JAA17350.1| musashi homolog 2 [Pan troglodytes]
gi|410287210|gb|JAA22205.1| musashi homolog 2 [Pan troglodytes]
gi|410335871|gb|JAA36882.1| musashi homolog 2 [Pan troglodytes]
gi|417399031|gb|JAA46548.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 328
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 92/146 (63%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 141
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +K T RGF F+ F++ DVV+K+
Sbjct: 142 MFDKTTNRHRGFGFVTFENEDVVEKV 167
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|355568556|gb|EHH24837.1| hypothetical protein EGK_08563, partial [Macaca mulatta]
gi|355754027|gb|EHH57992.1| hypothetical protein EGM_07749, partial [Macaca fascicularis]
Length = 308
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 92/146 (63%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 2 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 61
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 62 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 121
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +K T RGF F+ F++ DVV+K+
Sbjct: 122 MFDKTTNRHRGFGFVTFENEDVVEKV 147
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 90 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 149
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 150 IHFHEINNKMVECKKAQPKEVMFPPGTR 177
>gi|115629158|ref|XP_779906.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like isoform 1 [Strongylocentrotus purpuratus]
Length = 360
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 96/165 (58%), Gaps = 19/165 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
M + EPE RKLF+GGL Y T +D++K +F Q+GEIVD V+KDP + +S+GFGF+T
Sbjct: 1 MSEENYKEPEQERKLFLGGLSYNTKEDNIKEYFGQFGEIVDCCVIKDPTSLKSKGFGFVT 60
Query: 92 YSESKMVDEAMSNR---PHEIDGRVVETKRAVPREVK----------VRRVTKVQIALEQ 138
++ K V++ M R PH +D R V+ +RA+ R+ K V + K E
Sbjct: 61 FASRKEVNKVMGARKENPHRLDNRAVDVRRAMARDEKGPKNPSFKCFVGGIPKETTEEEL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YF Q+G I + + +K GF+FI +DD D VD+IV+ K
Sbjct: 121 RAYFSQFGQIVELALHLSK------GFSFITYDDTDCVDQIVMKK 159
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 25 AMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
A+ + +AM + K F+GG+ T ++ L+A+F Q+G+IV++ + S
Sbjct: 85 AVDVRRAMARDEKGPKNPSFKCFVGGIPKETTEEELRAYFSQFGQIVELALH------LS 138
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+GF FITY ++ VD+ + + H I+G+ VE K+A +E
Sbjct: 139 KGFSFITYDDTDCVDQIVMKKFHHINGKKVEGKKAYSKE 177
>gi|119614918|gb|EAW94512.1| musashi homolog 2 (Drosophila), isoform CRA_g [Homo sapiens]
Length = 255
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 92/146 (63%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 141
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +K T RGF F+ F++ DVV+K+
Sbjct: 142 MFDKTTNRHRGFGFVTFENEDVVEKV 167
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 170 IHFHEINNKMVECKKAQPKEV 190
>gi|156538565|ref|XP_001607438.1| PREDICTED: hypothetical protein LOC100123736 [Nasonia vitripennis]
Length = 395
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 90/145 (62%), Gaps = 10/145 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ + L+ +F +G + DV++MKDPVT+RSRGFGFIT++E VD+ +
Sbjct: 56 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 115
Query: 105 RPHEIDGRVVETKRAVP--REVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMV 154
H +DG+ ++ K A P R + R K+ + D YF Q+G +E M+
Sbjct: 116 PIHTLDGKKIDPKHATPKNRAKQANRTKKIFVGGVSQDTSSEEVKAYFNQFGKVEETVML 175
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
+++T RGF F+ F++ DVVD++
Sbjct: 176 MDQQTKRHRGFGFVTFENEDVVDRV 200
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
A ++ + +K+F+GG+ T+ + +KA+F Q+G++ + V++ D TKR RGFGF+
Sbjct: 130 ATPKNRAKQANRTKKIFVGGVSQDTSSEEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFV 189
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV 124
T+ +VD H I + VE K+A P+E
Sbjct: 190 TFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 223
>gi|26341844|dbj|BAC34584.1| unnamed protein product [Mus musculus]
Length = 278
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 92/147 (62%), Gaps = 11/147 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 78 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 137
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIV 180
+ +K T RGF F+ F++ DVV+K+
Sbjct: 138 MFDKTTNRHRGFGFVTFENEDVVEKVC 164
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 106 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 165
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 166 IHFHEINNKMVECKKAQPKEV 186
>gi|119614917|gb|EAW94511.1| musashi homolog 2 (Drosophila), isoform CRA_f [Homo sapiens]
Length = 328
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 100/161 (62%), Gaps = 13/161 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 141
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
+ +K T RGF F+ F++ DVV+K+ ++ E++ +++
Sbjct: 142 MFDKTTNRHRGFGFVTFENEDVVEKVC--EIHFHEINNKMV 180
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|355704546|gb|AES02263.1| musashi-like protein 2 [Mustela putorius furo]
Length = 306
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 92/146 (63%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 1 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 60
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 61 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 120
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +K T RGF F+ F++ DVV+K+
Sbjct: 121 MFDKTTNRHRGFGFVTFENEDVVEKV 146
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 89 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 148
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 149 IHFHEINNKMVECKKAQPKEVMFPPGTR 176
>gi|432876614|ref|XP_004073060.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 302
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 13/154 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLF+GGL+ T D+ L+ +FEQ+G + D VV+ + RSR FGFITYS + D AM
Sbjct: 5 LCKLFVGGLNVETTDEGLRKYFEQYGALTDCVVVMNQQLGRSRCFGFITYSAPEEADAAM 64
Query: 103 SNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGTIE 149
+ +PH ++G VE KRA+ RE V+++ K + E + +YF Q+G +E
Sbjct: 65 AAKPHVVEGNNVELKRAIAREDANNPDIVANVKKIFVGGVKDHVEAENLTEYFSQFGRVE 124
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
++++K+TG KRGF F+ F+D D K L K
Sbjct: 125 KSEIISDKQTGRKRGFGFVYFEDTDSATKAALAK 158
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDV 73
V G V L I A ED+ + P+ +++K+F+GG+ ++L +F Q+G +
Sbjct: 71 VEGNNVELKRAI--AREDA--NNPDIVANVKKIFVGGVKDHVEAENLTEYFSQFGRVEKS 126
Query: 74 VVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
++ D T R RGFGF+ + ++ +A + H I G VE K+A+ ++
Sbjct: 127 EIISDKQTGRKRGFGFVYFEDTDSATKAALAKYHTISGNKVEVKKALTKQ 176
>gi|254579563|ref|XP_002495767.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
gi|238938658|emb|CAR26834.1| ZYRO0C02574p [Zygosaccharomyces rouxii]
Length = 543
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 96/149 (64%), Gaps = 10/149 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D+L+ +F ++G ++D+ +MKD T RSRGFGF+T+ S VDE +
Sbjct: 160 KMFIGGLNWETTEDTLRDYFSKYGRVIDLKIMKDTNTGRSRGFGFLTFDSSSSVDEVVKT 219
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PRE + + K+ + E ++F Q+GTI ++ +
Sbjct: 220 Q-HILDGKVIDPKRAIPREEQ-DKTGKIFVGGIGADVRPKEFEEFFAQWGTIIDAQLMLD 277
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
K+TG RGF F+ +D D VD++ +K +
Sbjct: 278 KDTGRSRGFGFVTYDSPDAVDRVCQNKFI 306
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E + K+F+GG+ + FF QWG I+D +M D T RSRGFGF+TY V
Sbjct: 238 EQDKTGKIFVGGIGADVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAV 297
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRR 128
D N+ + G+ +E KRA PR ++ ++
Sbjct: 298 DRVCQNKFIDFKGKKIEIKRAEPRHMQKQQ 327
>gi|383856328|ref|XP_003703661.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Megachile
rotundata]
Length = 316
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 90/146 (61%), Gaps = 10/146 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ + L+ +F +G + DV++MKDPVT+RSRGFGFIT++E VD+ +
Sbjct: 41 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 100
Query: 105 RPHEIDGRVVETKRAVP--REVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMV 154
H +DG+ ++ K A P R + R K+ + D YF Q+G +E M+
Sbjct: 101 PIHTLDGKKIDPKHATPKNRAKQANRTKKIFVGGVSQDTSSEEVKAYFNQFGKVEETVML 160
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIV 180
+++T RGF F+ F++ DVVD++
Sbjct: 161 MDQQTKRHRGFGFVTFENEDVVDRVC 186
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
A ++ + +K+F+GG+ T+ + +KA+F Q+G++ + V++ D TKR RGFGF+
Sbjct: 115 ATPKNRAKQANRTKKIFVGGVSQDTSSEEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFV 174
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV 124
T+ +VD H I + VE K+A P+E
Sbjct: 175 TFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 208
>gi|189234173|ref|XP_968418.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein
[Tribolium castaneum]
Length = 373
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 91/145 (62%), Gaps = 10/145 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ + L+ +F +G + DV++MKDPVT+RSRGFGFIT+SE VD +
Sbjct: 57 KLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVDNVLKV 116
Query: 105 RPHEIDGRVVETKRAVP----------REVKVRRVTKVQIALEQMDYFGQYGTIESVNMV 154
H +DG+ ++ K A P +++ V V++ A E YF Q+G +E M+
Sbjct: 117 PIHTLDGKKIDPKHATPKNRPKQPNKTKKIFVGGVSQDTSADEVKAYFSQFGKVEETVML 176
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
+++T RGF F+ F++ DVVD++
Sbjct: 177 MDQQTKRHRGFGFVTFENEDVVDRV 201
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
A ++ +P +K+F+GG+ T+ D +KA+F Q+G++ + V++ D TKR RGFGF+
Sbjct: 131 ATPKNRPKQPNKTKKIFVGGVSQDTSADEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFV 190
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV 124
T+ +VD H I + VE K+A P+E
Sbjct: 191 TFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 224
>gi|353232013|emb|CCD79368.1| putative heterogeneous nuclear ribonucleoprotein [Schistosoma
mansoni]
Length = 260
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 68/80 (85%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+KLFIGGL +T+++SLK ++ QWGEI+DVVVMKDP +++SRGFGF+TY +S VD A +
Sbjct: 14 KKLFIGGLSPKTDENSLKNYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYKDSSSVDAAQN 73
Query: 104 NRPHEIDGRVVETKRAVPRE 123
NRPH +DG+ V+TKRA+PRE
Sbjct: 74 NRPHTVDGKEVDTKRAMPRE 93
>gi|156837267|ref|XP_001642663.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
gi|156113219|gb|EDO14805.1| hypothetical protein Kpol_1076p11 [Vanderwaltozyma polyspora DSM
70294]
Length = 526
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 105/166 (63%), Gaps = 10/166 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +++L+ +F ++G++V++ +MKD T RSRGFGF+T+ ++ VDE +
Sbjct: 157 KMFIGGLNWETTEETLRDYFNKYGKVVELKIMKDNNTGRSRGFGFLTFEDATSVDEVVKT 216
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PRE + + K+ + E D+F QYGTI ++ +
Sbjct: 217 Q-HILDGKVIDPKRAIPREEQ-DKTGKIFVGGIGADVRPKEFEDFFAQYGTIIDAQLMLD 274
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGEDHRTH 202
K+TG RGF F+ +D D VD++ +K + + Q I + RT+
Sbjct: 275 KDTGRSRGFGFVTYDSPDAVDRVCQNKFIEFKGKQIEIKRAEPRTN 320
>gi|417398472|gb|JAA46269.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 293
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 92/146 (63%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 141
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +K T RGF F+ F++ DVV+K+
Sbjct: 142 MFDKTTNRHRGFGFVTFENEDVVEKV 167
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 170 IHFHEINNKMVECKKAQPKEV 190
>gi|256078745|ref|XP_002575655.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 235
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 68/80 (85%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+KLFIGGL +T+++SLK ++ QWGEI+DVVVMKDP +++SRGFGF+TY +S VD A +
Sbjct: 14 KKLFIGGLSPKTDENSLKNYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYKDSSSVDAAQN 73
Query: 104 NRPHEIDGRVVETKRAVPRE 123
NRPH +DG+ V+TKRA+PRE
Sbjct: 74 NRPHTVDGKEVDTKRAMPRE 93
>gi|432100128|gb|ELK29014.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 118
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 67/85 (78%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFI GL + T ++SL++ FEQWG + D VVM+DP TK SRGFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIRGLSFETTNESLRSHFEQWGMLTDCVVMRDPNTKCSRGFGFVTYATVEEV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE 123
D AM+ RPH++DGRVVE KRAV RE
Sbjct: 69 DAAMNARPHKVDGRVVEPKRAVSRE 93
>gi|366988347|ref|XP_003673940.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
gi|342299803|emb|CCC67559.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
Length = 506
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 97/155 (62%), Gaps = 10/155 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLFIGGL++ T +D LK +F ++G +VD+ +MKD T RSRGFGF+T+ S VDE +
Sbjct: 194 KLFIGGLNWETTEDKLKDYFSKYGNVVDLKIMKDNATGRSRGFGFLTFELSSSVDEVVKT 253
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQI--------ALEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PRE + + K+ + E ++F Q+GTI ++ +
Sbjct: 254 Q-HILDGKVIDPKRAIPREEQ-DKTGKIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLD 311
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
K+TG RGF FI +D + VD++ +K + + Q
Sbjct: 312 KDTGRSRGFGFITYDSSEAVDRVCQNKYIDFKGKQ 346
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T RSRGFGFITY S+ VD N
Sbjct: 278 KIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDSSEAVDRVCQN 337
Query: 105 RPHEIDGRVVETKRAVPREVK 125
+ + G+ +E KRA PR ++
Sbjct: 338 KYIDFKGKQIEIKRAAPRHMQ 358
>gi|443724647|gb|ELU12551.1| hypothetical protein CAPTEDRAFT_175465 [Capitella teleta]
Length = 314
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 94/148 (63%), Gaps = 10/148 (6%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
+RKLFIGGL+ T D+SL+ +F +G I D VV+KD T RSR FGF+ YS S +VD A
Sbjct: 1 MRKLFIGGLNISTTDESLREYFSAFGTIEDCVVLKD-STGRSRCFGFVVYSSSAIVDIAQ 59
Query: 103 SNRPHEIDGRVVETKRAVPR-EVKVRRVTKVQIALEQMD--------YFGQYGTIESVNM 153
++RPH +DG+ V+TKRA P+ E + V K+ + + +F Q+G + V+
Sbjct: 60 ASRPHVLDGKTVDTKRATPKGETTSQTVKKIFVGGLSRNTTKESIQAFFEQFGGVSDVDC 119
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIVL 181
++++G RGFA++ F+D D VDK+ L
Sbjct: 120 PLDQKSGLGRGFAYVTFNDSDPVDKVSL 147
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
++++K+F+GGL T +S++AFFEQ+G + DV D + RGF ++T+++S VD+
Sbjct: 85 QTVKKIFVGGLSRNTTKESIQAFFEQFGGVSDVDCPLDQKSGLGRGFAYVTFNDSDPVDK 144
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
H IDGR E K+A+ ++
Sbjct: 145 VSLIHYHMIDGRRCEAKKALSKQ 167
>gi|393910199|gb|EJD75782.1| hypothetical protein LOAG_17145 [Loa loa]
Length = 355
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 31/171 (18%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
+S+C P RKLFIGGL + T D+ L+ ++ QWG +VD +V++DP TK SRGFGF+T++
Sbjct: 47 NSEC--PPQPRKLFIGGLSHETTDEQLRQYYSQWGTVVDCIVIRDPQTKYSRGFGFVTFA 104
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR--------------------RVTKVQ 133
+M + AM++RPH I+ +VV+ KRA+PRE ++ +
Sbjct: 105 TIQMAEAAMADRPHTINNKVVDPKRAIPREQMSPLLPNHPPSFLEIEPDPGCKLSLSGIH 164
Query: 134 IALEQMD----YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
A +D YF +GT+E V ++ G RG F+ F+ DK +
Sbjct: 165 WAWHTVDDLRQYFDNFGTVEQVEIL-----GNPRGLGFVVFESKPSADKCL 210
>gi|340730010|ref|XP_003403285.1| PREDICTED: DAZ-associated protein 1-like [Bombus terrestris]
Length = 390
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 90/145 (62%), Gaps = 10/145 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ + L+ +F +G + DV++MKDPVT+RSRGFGFIT++E VD+ +
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 121
Query: 105 RPHEIDGRVVETKRAVP--REVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMV 154
H +DG+ ++ K A P R + R K+ + D YF Q+G +E M+
Sbjct: 122 PIHTLDGKKIDPKHATPKNRAKQANRTKKIFVGGVSQDTSSDEVKAYFNQFGKVEETVML 181
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
+++T RGF F+ F++ DVVD++
Sbjct: 182 MDQQTKRHRGFGFVTFENEDVVDRV 206
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
A ++ + +K+F+GG+ T+ D +KA+F Q+G++ + V++ D TKR RGFGF+
Sbjct: 136 ATPKNRAKQANRTKKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFV 195
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV 124
T+ +VD H I + VE K+A P+E
Sbjct: 196 TFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 229
>gi|270002456|gb|EEZ98903.1| hypothetical protein TcasGA2_TC004519 [Tribolium castaneum]
Length = 358
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 91/145 (62%), Gaps = 10/145 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ + L+ +F +G + DV++MKDPVT+RSRGFGFIT+SE VD +
Sbjct: 42 KLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVDNVLKV 101
Query: 105 RPHEIDGRVVETKRAVP----------REVKVRRVTKVQIALEQMDYFGQYGTIESVNMV 154
H +DG+ ++ K A P +++ V V++ A E YF Q+G +E M+
Sbjct: 102 PIHTLDGKKIDPKHATPKNRPKQPNKTKKIFVGGVSQDTSADEVKAYFSQFGKVEETVML 161
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
+++T RGF F+ F++ DVVD++
Sbjct: 162 MDQQTKRHRGFGFVTFENEDVVDRV 186
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
A ++ +P +K+F+GG+ T+ D +KA+F Q+G++ + V++ D TKR RGFGF+
Sbjct: 116 ATPKNRPKQPNKTKKIFVGGVSQDTSADEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFV 175
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV 124
T+ +VD H I + VE K+A P+E
Sbjct: 176 TFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 209
>gi|198428311|ref|XP_002127222.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 359
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 92/162 (56%), Gaps = 18/162 (11%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E RKLF+GG+++ T DD + A+F ++G + D VV++D RS+GFGF+T+ +
Sbjct: 8 EEEQSRKLFVGGINHDTTDDGMSAYFSKYGNVTDCVVIRD--NGRSKGFGFVTFETEEEA 65
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA----------------LEQMDYF 142
D M +RPH +D R ++ KRAV RE + VQ+ E + F
Sbjct: 66 DACMDDRPHTLDSRTIDVKRAVSREESSKPGAHVQVKKIFIGGVKEGCDENALREYFNTF 125
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKV 184
IESV + ++ET +GFAF+ FDD+DVVDK+V ++
Sbjct: 126 TGNARIESVEIPLDRETTRPKGFAFVTFDDFDVVDKLVAKRI 167
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 20 TVVPLAMIINKAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQW---GEIVDV 73
T+ + + +A+ + S+P + ++K+FIGG+ ++++L+ +F + I V
Sbjct: 75 TLDSRTIDVKRAVSREESSKPGAHVQVKKIFIGGVKEGCDENALREYFNTFTGNARIESV 134
Query: 74 VVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D T R +GF F+T+ + +VD+ ++ R HEI G E K+A+ ++
Sbjct: 135 EIPLDRETTRPKGFAFVTFDDFDVVDKLVAKRIHEIGGFRCEVKKALSKQ 184
>gi|332018477|gb|EGI59067.1| RNA-binding protein Musashi-like protein Rbp6 [Acromyrmex
echinatior]
Length = 369
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 90/145 (62%), Gaps = 10/145 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ + L+ +F +G + DV++MKDP+T+RSRGFGFIT++E VD+ +
Sbjct: 41 KLFVGGLSWQTSSEKLREYFNMFGTVTDVLIMKDPMTQRSRGFGFITFAEPGSVDKVLKC 100
Query: 105 RPHEIDGRVVETKRAVP--REVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMV 154
H +DG+ ++ K A P R + R K+ + D YF Q+G +E M+
Sbjct: 101 PIHTLDGKKIDPKHATPKNRAKQANRTKKIFVGGVSQDTSSDEVKAYFNQFGKVEETVML 160
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
+++T RGF F+ F++ DVVD++
Sbjct: 161 MDQQTKRHRGFGFVTFENEDVVDRV 185
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
A ++ + +K+F+GG+ T+ D +KA+F Q+G++ + V++ D TKR RGFGF+
Sbjct: 115 ATPKNRAKQANRTKKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFV 174
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV 124
T+ +VD H I + VE K+A P+E
Sbjct: 175 TFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 208
>gi|209737592|gb|ACI69665.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 167
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 94/152 (61%), Gaps = 13/152 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLF+GGL+ T+DD L+ FEQ+G++ D VV+ + +RSR FGF+TYS ++ D AM
Sbjct: 7 LCKLFVGGLNVDTDDDGLRKHFEQYGQLTDCVVVVNKQLQRSRCFGFVTYSSAEEADAAM 66
Query: 103 SNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQMD-YFGQYGTIE 149
+ RPH +DG VE KRAV RE KV+++ K I E ++ YF Q+G IE
Sbjct: 67 AARPHVVDGTNVELKRAVAREDAGKPEALAKVKKIFIGGLKDDIEDEHLNEYFSQFGEIE 126
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
++ KETG KRGF F+ F D D DK V+
Sbjct: 127 KAEVIAEKETGKKRGFGFVHFTDNDSADKAVV 158
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDV 73
V GT V L + A ED+ +PE+L +K+FIGGL D+ L +F Q+GEI
Sbjct: 73 VDGTNVELKRAV--AREDA--GKPEALAKVKKIFIGGLKDDIEDEHLNEYFSQFGEIEKA 128
Query: 74 VVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDG 111
V+ + T + RGFGF+ ++++ D+A+ + H I+G
Sbjct: 129 EVIAEKETGKKRGFGFVHFTDNDSADKAVVLKFHNING 166
>gi|350421557|ref|XP_003492883.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Bombus impatiens]
Length = 241
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 90/145 (62%), Gaps = 10/145 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ + L+ +F +G + DV++MKDPVT+RSRGFGFIT++E VD+ +
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 121
Query: 105 RPHEIDGRVVETKRAVP--REVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMV 154
H +DG+ ++ K A P R + R K+ + D YF Q+G +E M+
Sbjct: 122 PIHTLDGKKIDPKHATPKNRAKQANRTKKIFVGGVSQDTSSDEVKAYFNQFGKVEETVML 181
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
+++T RGF F+ F++ DVVD++
Sbjct: 182 MDQQTKRHRGFGFVTFENEDVVDRV 206
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
A ++ + +K+F+GG+ T+ D +KA+F Q+G++ + V++ D TKR RGFGF+
Sbjct: 136 ATPKNRAKQANRTKKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFV 195
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV 124
T+ +VD H I + VE K+A P+E
Sbjct: 196 TFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 229
>gi|209733550|gb|ACI67644.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 181
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/152 (45%), Positives = 94/152 (61%), Gaps = 13/152 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLF+GGL+ T+DD L+ FEQ+G++ D VV+ + +RSR FGF+TYS ++ D AM
Sbjct: 7 LCKLFVGGLNVDTDDDGLRKHFEQYGQLTDCVVVVNKQLQRSRCFGFVTYSSAEEADAAM 66
Query: 103 SNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQMD-YFGQYGTIE 149
+ RPH +DG VE KRAV RE KV+++ K I E ++ YF Q+G IE
Sbjct: 67 AARPHVVDGTNVELKRAVAREDAGKPEALAKVKKIFIGGLKDDIEDEHLNEYFSQFGEIE 126
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
++ KETG KRGF F+ F D D DK V+
Sbjct: 127 KAEVIAEKETGKKRGFGFVHFTDNDSADKAVV 158
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDV 73
V GT V L + A ED+ +PE+L +K+FIGGL D+ L +F Q+GEI
Sbjct: 73 VDGTNVELKRAV--AREDA--GKPEALAKVKKIFIGGLKDDIEDEHLNEYFSQFGEIEKA 128
Query: 74 VVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEI 109
V+ + T + RGFGF+ ++++ D+A+ + H I
Sbjct: 129 EVIAEKETGKKRGFGFVHFTDNDSADKAVVLKFHNI 164
>gi|259013338|ref|NP_001158364.1| musashi homolog 2 [Saccoglossus kowalevskii]
gi|32307763|gb|AAP79278.1| musashi nrp-1 [Saccoglossus kowalevskii]
Length = 394
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 99/165 (60%), Gaps = 12/165 (7%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P K+FIGGL ++T D L+ +F ++GE+ + +VM+D TKRSRGFGFIT+ + V+
Sbjct: 17 PNDPGKMFIGGLSWQTTPDGLREYFSKFGEVTECMVMRDQATKRSRGFGFITFRDPASVE 76
Query: 100 EAMSNRPHEIDGRVVETKRAVPR--EVKVRRVTKVQI--------ALEQMDYFGQYGTIE 149
+ ++ HE+D + ++ K A P+ KV R K+ + A + ++F QYG +E
Sbjct: 77 KVLAQAAHELDQKKIDPKVAFPKRSHPKVTRTKKIFVGGLSANTTADDIKNHFSQYGKVE 136
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
++ +K+T RGF F+ FD DVVDKI ++ EV+ +++
Sbjct: 137 EAQLMFDKQTNRHRGFGFVTFDSEDVVDKIC--EIHFHEVNSKMV 179
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T D +K F Q+G++ + +M D T R RGFGF+T+ +VD+
Sbjct: 109 KKIFVGGLSANTTADDIKNHFSQYGKVEEAQLMFDKQTNRHRGFGFVTFDSEDVVDKICE 168
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HE++ ++VE K+A P+EV
Sbjct: 169 IHFHEVNSKMVECKKAQPKEV 189
>gi|323331635|gb|EGA73049.1| Hrp1p [Saccharomyces cerevisiae AWRI796]
Length = 521
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 96/149 (64%), Gaps = 10/149 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D+L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VDE +
Sbjct: 147 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 206
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PR+ + + K+ + E ++F Q+GTI ++ +
Sbjct: 207 Q-HILDGKVIDPKRAIPRDEQ-DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLD 264
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
K+TG RGF F+ +D D VD++ +K +
Sbjct: 265 KDTGQSRGFGFVTYDSADAVDRVCQNKFI 293
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T +SRGFGF+TY + VD N
Sbjct: 231 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 290
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
+ + R +E KRA PR ++ +
Sbjct: 291 KFIDFKDRKIEIKRAEPRHMQQK 313
>gi|449479907|ref|XP_002196910.2| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 1
[Taeniopygia guttata]
Length = 306
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 92/145 (63%), Gaps = 11/145 (7%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ ++
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQP 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNMV 154
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E ++
Sbjct: 61 HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 120
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
+K T RGF F+ F++ DVV+K+
Sbjct: 121 FDKTTNRHRGFGFVTFENEDVVEKV 145
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMFPPGTR 175
>gi|390331826|ref|XP_003723361.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like [Strongylocentrotus purpuratus]
Length = 330
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 94/158 (59%), Gaps = 19/158 (12%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE RKLF+GGL Y T +D++K +F Q+GEIVD V+KDP + +S+GFGF+T++ K V
Sbjct: 17 EPEQERKLFLGGLSYNTKEDNIKEYFGQFGEIVDCCVIKDPTSLKSKGFGFVTFASRKEV 76
Query: 99 DEAMSNR---PHEIDGRVVETKRAVPREVK----------VRRVTKVQIALEQMDYFGQY 145
++ M R PH +D R V+ +RA+ R+ K V + K E YF Q+
Sbjct: 77 NKVMGARKENPHRLDNRAVDVRRAMARDEKGPKNPSFKCFVGGIPKETTEEELRAYFSQF 136
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G I + + +K GF+FI +DD D VD+IV+ K
Sbjct: 137 GQIVELALHLSK------GFSFITYDDTDCVDQIVMKK 168
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 25 AMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
A+ + +AM + K F+GG+ T ++ L+A+F Q+G+IV++ + S
Sbjct: 94 AVDVRRAMARDEKGPKNPSFKCFVGGIPKETTEEELRAYFSQFGQIVELALH------LS 147
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+GF FITY ++ VD+ + + H I+G+ VE K+A +E
Sbjct: 148 KGFSFITYDDTDCVDQIVMKKFHHINGKKVEGKKAYSKE 186
>gi|323346676|gb|EGA80960.1| Hrp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 576
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 96/149 (64%), Gaps = 10/149 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D+L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VDE +
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PR+ + + K+ + E ++F Q+GTI ++ +
Sbjct: 220 Q-HILDGKVIDPKRAIPRDEQ-DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLD 277
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
K+TG RGF F+ +D D VD++ +K +
Sbjct: 278 KDTGQSRGFGFVTYDSADAVDRVCQNKFI 306
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T +SRGFGF+TY + VD N
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
+ + R +E KRA PR ++ +
Sbjct: 304 KFIDFKDRKIEIKRAEPRHMQQK 326
>gi|328779378|ref|XP_003249642.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Apis mellifera]
Length = 212
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 90/145 (62%), Gaps = 10/145 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ + L+ +F +G + DV++MKDPVT+RSRGFGFIT++E VD+ +
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKVLKC 121
Query: 105 RPHEIDGRVVETKRAVP--REVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMV 154
H +DG+ ++ K A P R + R K+ + D YF Q+G +E M+
Sbjct: 122 PIHTLDGKKIDPKHATPKNRAKQANRTKKIFVGGVSQDTSSDEVKAYFNQFGKVEETVML 181
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
+++T RGF F+ F++ DVVD++
Sbjct: 182 MDQQTKRHRGFGFVTFENEDVVDRV 206
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
A ++ + +K+F+GG+ T+ D +KA+F Q+G++ + V++ D TKR RGFGF+
Sbjct: 136 ATPKNRAKQANRTKKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFV 195
Query: 91 TYSESKMVD 99
T+ +VD
Sbjct: 196 TFENEDVVD 204
>gi|119614244|gb|EAW93838.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_d [Homo
sapiens]
gi|119614246|gb|EAW93840.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_d [Homo
sapiens]
gi|119614247|gb|EAW93841.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_d [Homo
sapiens]
Length = 301
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 81/121 (66%), Gaps = 13/121 (10%)
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE----------VK 125
M+DP +KRSRGFGF+T+S VD AM+ RPH IDGRVVE KRAV RE VK
Sbjct: 1 MRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVK 60
Query: 126 VRRVTKVQIALEQ---MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD 182
V ++ E+ DYF +YG I+++ ++T++++G KRGF F+ FDD+D VDKIVL
Sbjct: 61 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 120
Query: 183 K 183
K
Sbjct: 121 K 121
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++KLF+GG+ T + L+ +FE++G+I + ++ D + + RGFGF+T+ + VD+
Sbjct: 58 TVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 117
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E ++A+ R+
Sbjct: 118 VLQKYHTINGHNAEVRKALSRQ 139
>gi|365758528|gb|EHN00365.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 539
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 96/149 (64%), Gaps = 10/149 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D+L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VDE +
Sbjct: 163 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 222
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PR+ + + K+ + E ++F Q+GTI ++ +
Sbjct: 223 Q-HILDGKVIDPKRAIPRDEQ-DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLD 280
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
K+TG RGF F+ +D D VD++ +K +
Sbjct: 281 KDTGQSRGFGFVTYDSADAVDRVCQNKFI 309
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T +SRGFGF+TY + VD N
Sbjct: 247 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 306
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
+ + R +E KRA PR ++ +
Sbjct: 307 KFIDFKDRKIEIKRAEPRHMQQK 329
>gi|410920299|ref|XP_003973621.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 350
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 95/153 (62%), Gaps = 11/153 (7%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
+ P K+FIGGL ++T + LK +F ++GE+ + +VM+DPVTKRSRGFGF+TY++
Sbjct: 16 NSPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAG 75
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYG 146
V++ ++ HE+D + ++ K A PR + + VT+ V +E + YF Q+G
Sbjct: 76 VEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFG 135
Query: 147 TIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
++ ++ +K T RGF F+ F++ DVV+K+
Sbjct: 136 KVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKV 168
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 111 KKIFVGGLSVNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 171 IHFHEINNKMVECKKAQPKEV 191
>gi|410920297|ref|XP_003973620.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 331
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 95/153 (62%), Gaps = 11/153 (7%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
+ P K+FIGGL ++T + LK +F ++GE+ + +VM+DPVTKRSRGFGF+TY++
Sbjct: 16 NSPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAG 75
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQMD-YFGQYG 146
V++ ++ HE+D + ++ K A PR + + VT+ V +E + YF Q+G
Sbjct: 76 VEKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFG 135
Query: 147 TIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
++ ++ +K T RGF F+ F++ DVV+K+
Sbjct: 136 KVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKV 168
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 111 KKIFVGGLSVNTTIEDVKHYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 170
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 171 IHFHEINNKMVECKKAQPKEV 191
>gi|328711026|ref|XP_001943905.2| PREDICTED: hypothetical protein LOC100169433 [Acyrthosiphon pisum]
Length = 530
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 94/145 (64%), Gaps = 10/145 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ D LK +F +G++ +V++MKDP+T+RSRGFGFIT+S+++ V++ ++
Sbjct: 219 KLFVGGLSWQTSADKLKQYFGMFGDVTNVLIMKDPITQRSRGFGFITFSDAETVEKVLAV 278
Query: 105 RPHEIDGRVVETKRAVP----------REVKVRRVTKVQIALEQMDYFGQYGTIESVNMV 154
H +DG+ ++ K A P +++ V V++ A E YF Q+G +E M+
Sbjct: 279 PIHTLDGKKIDPKHATPKNRPKAGSKTKKIFVGGVSQDTTADEVKAYFSQFGKVEETVML 338
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
++ T RGF F+ F++ D+VD I
Sbjct: 339 MDQHTKRHRGFGFVTFENDDIVDTI 363
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T D +KA+F Q+G++ + V++ D TKR RGFGF+T+ +VD
Sbjct: 306 KKIFVGGVSQDTTADEVKAYFSQFGKVEETVMLMDQHTKRHRGFGFVTFENDDIVDTICE 365
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E+
Sbjct: 366 IHFHTIKNKKVECKKAQPKEL 386
>gi|344243477|gb|EGV99580.1| RNA-binding protein Musashi-like 2 [Cricetulus griseus]
Length = 325
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 91/145 (62%), Gaps = 11/145 (7%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNMV 154
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E ++
Sbjct: 61 HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 120
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
+K T RGF F+ F++ DVV+K+
Sbjct: 121 FDKTTNRHRGFGFVTFENEDVVEKV 145
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMFPPGTR 175
>gi|397493092|ref|XP_003817447.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Pan paniscus]
gi|403279708|ref|XP_003931388.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Saimiri
boliviensis boliviensis]
gi|194379116|dbj|BAG58109.1| unnamed protein product [Homo sapiens]
Length = 324
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 91/145 (62%), Gaps = 11/145 (7%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNMV 154
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E ++
Sbjct: 61 HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 120
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
+K T RGF F+ F++ DVV+K+
Sbjct: 121 FDKTTNRHRGFGFVTFENEDVVEKV 145
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMFPPGTR 175
>gi|348516192|ref|XP_003445623.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oreochromis
niloticus]
Length = 329
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 94/156 (60%), Gaps = 11/156 (7%)
Query: 35 SQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSE 94
S P K+FIGGL ++T + LK +F ++GE+ + +VM+DPVTKRSRGFGF+T+ +
Sbjct: 11 STADSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVD 70
Query: 95 SKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFG 143
VD+ ++ HE+D + ++ K A PR + + VT+ V +E + YF
Sbjct: 71 QAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFD 130
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
Q+G ++ ++ +K T RGF F+ F++ DVV+K+
Sbjct: 131 QFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKV 166
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 169 IHFHEINNKMVECKKAQPKEV 189
>gi|410922321|ref|XP_003974631.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 4
[Takifugu rubripes]
Length = 341
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 16/163 (9%)
Query: 33 EDSQCS-----EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGF 87
E SQ S P K+FIGGL ++T + LK +F ++GE+ + +VM+DPVTKRSRGF
Sbjct: 4 EGSQSSLSAVDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGF 63
Query: 88 GFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALE 137
GF+T+ + VD+ ++ HE+D + ++ K A PR + + VT+ V +E
Sbjct: 64 GFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIE 123
Query: 138 QM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ YF Q+G ++ ++ +K T RGF F+ F++ DVV+K+
Sbjct: 124 DVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKV 166
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 169 IHFHEINNKMVECKKAQPKEV 189
>gi|347966951|ref|XP_321067.5| AGAP001993-PA [Anopheles gambiae str. PEST]
gi|333469826|gb|EAA01260.6| AGAP001993-PA [Anopheles gambiae str. PEST]
Length = 556
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 90/146 (61%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ + L +F +G + DV++MKDPVT+RSRGFGFIT+ E VD+ +
Sbjct: 183 KLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDKVLQV 242
Query: 105 RPHEIDGRVVETKRAVP-----------REVKVRRVTKVQIALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P +++ V V++ A E YF Q+G +E M
Sbjct: 243 PIHTLDGKKIDPKHATPKNRPKTQSNKTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVM 302
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 303 LMDQQTKRHRGFGFVTFENEDVVDRV 328
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ + +KA+F Q+G++ + V++ D TKR RGFGF+T+ +VD
Sbjct: 271 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 330
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 331 IHFHTIKNKKVECKKAQPKEA 351
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 133 QIALEQM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
Q + E++ +YFG +GT+ V ++ + T RGF FI F + + VDK VL+V
Sbjct: 192 QTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDK-------VLQVPI 244
Query: 192 EVINGEDHRTHGTHQEAKVDGVTTTNQT 219
++G+ + H K T +N+T
Sbjct: 245 HTLDGK--KIDPKHATPKNRPKTQSNKT 270
>gi|195571109|ref|XP_002103546.1| GD20485 [Drosophila simulans]
gi|194199473|gb|EDX13049.1| GD20485 [Drosophila simulans]
Length = 395
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 95/168 (56%), Gaps = 27/168 (16%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E LRK+FIGGL +T+ D L+ FF Q+G + D VVM+DP++ SRGFGF+T+ + K V+
Sbjct: 29 EHLRKIFIGGLSTQTSVDKLREFFSQFGVVSDAVVMRDPMSNHSRGFGFVTFVDPKSVEI 88
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRR------------VTKVQIALEQM--------- 139
RPH ID ++VETK A+PR+ R V +I L +
Sbjct: 89 VQRARPHTIDNKIVETKHALPRQEFKRGSVVGGFRFETGFVNSKRIFLGGLKEYHDEKVV 148
Query: 140 -DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVV 186
+YF Q+G + SV ++ ++ETG +R F F+EF VD + DK +
Sbjct: 149 REYFSQFGPVASVKLLIDRETGRQRAFGFLEF-----VDPLSADKALA 191
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+++F+GGL ++ ++ +F Q+G + V ++ D T R R FGF+ + + D+A++
Sbjct: 132 KRIFLGGLKEYHDEKVVREYFSQFGPVASVKLLIDRETGRQRAFGFLEFVDPLSADKALA 191
Query: 104 NRPHEIDGRVVETKRAV 120
R H I +VE KR+
Sbjct: 192 PRKHWILQTLVEVKRST 208
>gi|451850144|gb|EMD63446.1| hypothetical protein COCSADRAFT_160854 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 95/151 (62%), Gaps = 10/151 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +DSLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 108 KMFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMV- 166
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
+ H +DG++++ KRA+PRE + R +K+ Q A E+ ++F Q+G + ++ +
Sbjct: 167 KEHYLDGKIIDPKRAIPREEQ-ERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMD 225
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
KETG RGF F+ FD VD + + +L
Sbjct: 226 KETGRPRGFGFVTFDGDAAVDATLRGPLQIL 256
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ ++ FF+Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 186 EQERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAV 245
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D + P +I G+ +E KRA PR
Sbjct: 246 DATLRG-PLQILGKQIEVKRAQPR 268
>gi|259149364|emb|CAY86168.1| Hrp1p [Saccharomyces cerevisiae EC1118]
Length = 534
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 96/149 (64%), Gaps = 10/149 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D+L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VDE +
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PR+ + + K+ + E ++F Q+GTI ++ +
Sbjct: 220 Q-HILDGKVIDPKRAIPRDEQ-DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLD 277
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
K+TG RGF F+ +D D VD++ +K +
Sbjct: 278 KDTGQSRGFGFVTYDSADAVDRVCQNKFI 306
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T +SRGFGF+TY + VD N
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
+ + R +E KRA PR ++ +
Sbjct: 304 KFIDFKDRKIEIKRAEPRHMQQK 326
>gi|213408421|ref|XP_002174981.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
gi|212003028|gb|EEB08688.1| DAZ-associated protein [Schizosaccharomyces japonicus yFS275]
Length = 453
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 98/175 (56%), Gaps = 13/175 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D+SL+ +FEQ+GE++D VM+D T RSRGFGF+T+ + K V MS
Sbjct: 121 KMFIGGLNWETTDESLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKDPKCVQVVMSK 180
Query: 105 RPHEIDGRVVETKRAVPREVKVRR-------VTKVQIALEQMDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PRE + + V E D+F Q+G + ++ +K
Sbjct: 181 E-HHLDGKIIDPKRAIPREEQEKTAKMFVGGVPADCTEEEFRDFFNQFGRVLDATLMMDK 239
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVL-----EVDQEVINGEDHRTHGTHQE 207
+TG RGF F+ F++ V+ + + + EV + H HQ+
Sbjct: 240 DTGRPRGFGFVTFENEAAVENTMSQPYITIHGKPVEVKRATPKASMRDQHDRHQQ 294
>gi|209155454|gb|ACI33959.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 299
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 96/152 (63%), Gaps = 13/152 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLF+GGL+ T DD L+ FEQ+G++ D VV+++ +RSR FGF+TYS ++ D AM
Sbjct: 5 LCKLFVGGLNVETTDDGLRQHFEQYGQLTDCVVVQNQQLQRSRCFGFVTYSSAEEADAAM 64
Query: 103 SNRPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGTIE 149
+ RPH +DG VE KRAV RE KV+++ K I + + DYF Q+G IE
Sbjct: 65 AARPHVVDGTNVELKRAVAREDAGRPEALAKVKKIFIGGLKDDIEDDHLNDYFSQFGAIE 124
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
++++K+T KRGF F+ F+D D DK V+
Sbjct: 125 KAEVISDKQTLKKRGFGFVYFEDNDSADKAVV 156
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPESL---RKLFIGGLDYRTNDDSLKAFFEQWGEIVDV 73
V GT V L + A ED+ PE+L +K+FIGGL DD L +F Q+G I
Sbjct: 71 VDGTNVELKRAV--AREDA--GRPEALAKVKKIFIGGLKDDIEDDHLNDYFSQFGAIEKA 126
Query: 74 VVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
V+ D T + RGFGF+ + ++ D+A+ + H I+G VE K+A+ ++
Sbjct: 127 EVISDKQTLKKRGFGFVYFEDNDSADKAVVLKFHTINGHKVEVKKALTKQ 176
>gi|323307358|gb|EGA60637.1| Hrp1p [Saccharomyces cerevisiae FostersO]
Length = 534
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 96/149 (64%), Gaps = 10/149 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D+L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VDE +
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PR+ + + K+ + E ++F Q+GTI ++ +
Sbjct: 220 Q-HILDGKVIDPKRAIPRDEQ-DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLD 277
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
K+TG RGF F+ +D D VD++ +K +
Sbjct: 278 KDTGQSRGFGFVTYDSADAVDRVCQNKFI 306
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T +SRGFGF+TY + VD N
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
+ + R +E KRA PR ++ +
Sbjct: 304 KFIDFKDRKIEIKRAEPRHMQQK 326
>gi|6324449|ref|NP_014518.1| Hrp1p [Saccharomyces cerevisiae S288c]
gi|2500574|sp|Q99383.1|HRP1_YEAST RecName: Full=Nuclear polyadenylated RNA-binding protein 4;
AltName: Full=Cleavage factor IB; Short=CFIB
gi|1016290|gb|AAA79097.1| nuclear polyadenylated RNA-binding protein [Saccharomyces
cerevisiae]
gi|1420003|emb|CAA99142.1| HRP1 [Saccharomyces cerevisiae]
gi|1550721|emb|CAA64546.1| RNA binding protein [Saccharomyces cerevisiae]
gi|1657691|gb|AAB18142.1| Hrp1p [Saccharomyces cerevisiae]
gi|285814768|tpg|DAA10661.1| TPA: Hrp1p [Saccharomyces cerevisiae S288c]
gi|349581049|dbj|GAA26207.1| K7_Hrp1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296592|gb|EIW07694.1| Hrp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 534
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 96/149 (64%), Gaps = 10/149 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D+L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VDE +
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PR+ + + K+ + E ++F Q+GTI ++ +
Sbjct: 220 Q-HILDGKVIDPKRAIPRDEQ-DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLD 277
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
K+TG RGF F+ +D D VD++ +K +
Sbjct: 278 KDTGQSRGFGFVTYDSADAVDRVCQNKFI 306
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T +SRGFGF+TY + VD N
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
+ + R +E KRA PR ++ +
Sbjct: 304 KFIDFKDRKIEIKRAEPRHMQQK 326
>gi|355750213|gb|EHH54551.1| hypothetical protein EGM_15416, partial [Macaca fascicularis]
Length = 182
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 93/161 (57%), Gaps = 19/161 (11%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME+SQ L KLFIGGL+ +T++ L+ FE +G + D VV+ +P TKRSR FGF+T
Sbjct: 1 MENSQ------LCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVT 54
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD------ 140
YS + D AM+ PH +DG VE KRAV RE R +V K+ + + D
Sbjct: 55 YSNVEEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDL 114
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+F Q+GT+E ++ +K++G KRGF F+ D V K
Sbjct: 115 IEHFSQFGTVEKAEIIADKQSGKKRGFGFVYAADKAAVVKF 155
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 17 VAGTVVPLAMIINKAMEDS-QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVV 75
V G V L +++ EDS + ++KLF+GGL + L F Q+G + +
Sbjct: 72 VDGNTVELKRAVSR--EDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEI 129
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+ D + + RGFGF+ D+A + H I G VE K+AVP+E
Sbjct: 130 IADKQSGKKRGFGFVY-----AADKAAVVKFHPIQGHRVEVKKAVPKE 172
>gi|410922319|ref|XP_003974630.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Takifugu rubripes]
Length = 363
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 16/163 (9%)
Query: 33 EDSQCS-----EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGF 87
E SQ S P K+FIGGL ++T + LK +F ++GE+ + +VM+DPVTKRSRGF
Sbjct: 4 EGSQSSLSAVDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGF 63
Query: 88 GFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALE 137
GF+T+ + VD+ ++ HE+D + ++ K A PR + + VT+ V +E
Sbjct: 64 GFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIE 123
Query: 138 QM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ YF Q+G ++ ++ +K T RGF F+ F++ DVV+K+
Sbjct: 124 DVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKV 166
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 169 IHFHEINNKMVECKKAQPKEV 189
>gi|365763141|gb|EHN04671.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 534
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 96/149 (64%), Gaps = 10/149 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D+L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VDE +
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PR+ + + K+ + E ++F Q+GTI ++ +
Sbjct: 220 Q-HILDGKVIDPKRAIPRDEQ-DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLD 277
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
K+TG RGF F+ +D D VD++ +K +
Sbjct: 278 KDTGQSRGFGFVTYDSADAVDRVCQNKFI 306
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T +SRGFGF+TY + VD N
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
+ + R +E KRA PR ++ +
Sbjct: 304 KFIDFKDRKIEIKRAEPRHMQQK 326
>gi|323303112|gb|EGA56914.1| Hrp1p [Saccharomyces cerevisiae FostersB]
Length = 550
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 96/149 (64%), Gaps = 10/149 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D+L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VDE +
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PR+ + + K+ + E ++F Q+GTI ++ +
Sbjct: 220 Q-HILDGKVIDPKRAIPRDEQ-DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLD 277
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
K+TG RGF F+ +D D VD++ +K +
Sbjct: 278 KDTGQSRGFGFVTYDSADAVDRVCQNKFI 306
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T +SRGFGF+TY + VD N
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
+ + R +E KRA PR ++ +
Sbjct: 304 KFIDFKDRKIEIKRAEPRHMQQK 326
>gi|410922317|ref|XP_003974629.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 329
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 16/163 (9%)
Query: 33 EDSQCS-----EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGF 87
E SQ S P K+FIGGL ++T + LK +F ++GE+ + +VM+DPVTKRSRGF
Sbjct: 4 EGSQSSLSAVDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGF 63
Query: 88 GFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALE 137
GF+T+ + VD+ ++ HE+D + ++ K A PR + + VT+ V +E
Sbjct: 64 GFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIE 123
Query: 138 QM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ YF Q+G ++ ++ +K T RGF F+ F++ DVV+K+
Sbjct: 124 DVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKV 166
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 169 IHFHEINNKMVECKKAQPKEV 189
>gi|358342147|dbj|GAA49679.1| heterogeneous nuclear ribonucleoprotein A1 A2/B1 homolog
[Clonorchis sinensis]
Length = 919
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 101/161 (62%), Gaps = 15/161 (9%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
M + C+ E RKLF+GGL+ T+D L+ F+ ++G + D VVMKD + RSRGFGF+T
Sbjct: 273 MSNPNCNMLE--RKLFVGGLNPVTDDYRLREFYSKFGVVTDAVVMKD-IAGRSRGFGFVT 329
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPR-------EVKVRR--VTKVQIALEQMD-- 140
Y + +M + A + RPHEIDG++V+ K+AVP+ ++ VR+ + ++ +++ D
Sbjct: 330 YEDPQMAEVACNARPHEIDGKIVDAKKAVPKGDAHPIPDIPVRKIFIGGLRRSVKDSDLF 389
Query: 141 -YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
YF ++G I ++ +KET RGF F+ F D D VD++
Sbjct: 390 SYFSEFGQIVEAVVMMDKETNQSRGFGFVTFVDTDSVDRVA 430
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
+RK+FIGGL D L ++F ++G+IV+ VVM D T +SRGFGF+T+ ++ VD
Sbjct: 371 VRKIFIGGLRRSVKDSDLFSYFSEFGQIVEAVVMMDKETNQSRGFGFVTFVDTDSVDRVA 430
Query: 103 SNRPHEIDGRVVETKRAVPRE 123
+ H I G V+ K+AV ++
Sbjct: 431 NETLHSICGFPVDVKKAVAKD 451
>gi|410922315|ref|XP_003974628.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 348
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 97/163 (59%), Gaps = 16/163 (9%)
Query: 33 EDSQCS-----EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGF 87
E SQ S P K+FIGGL ++T + LK +F ++GE+ + +VM+DPVTKRSRGF
Sbjct: 4 EGSQSSLSAVDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGF 63
Query: 88 GFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALE 137
GF+T+ + VD+ ++ HE+D + ++ K A PR + + VT+ V +E
Sbjct: 64 GFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIE 123
Query: 138 QM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ YF Q+G ++ ++ +K T RGF F+ F++ DVV+K+
Sbjct: 124 DVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKV 166
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 169 IHFHEINNKMVECKKAQPKEV 189
>gi|170042573|ref|XP_001848995.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167866108|gb|EDS29491.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 426
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 87/146 (59%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ + L +F +G++ DV++MKDP+T+RSRGFGFIT+ E VD+ +
Sbjct: 168 KLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDKVLKV 227
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P+ + K + A E YF Q+G +E M
Sbjct: 228 PIHTLDGKKIDPKHATPKNRPKTQSNKTKKIFVGGVSQDTSAEEVKQYFSQFGKVEETVM 287
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F+ DVVD++
Sbjct: 288 LMDQQTKRHRGFGFVTFEHEDVVDRV 313
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ + +K +F Q+G++ + V++ D TKR RGFGF+T+ +VD
Sbjct: 256 KKIFVGGVSQDTSAEEVKQYFSQFGKVEETVMLMDQQTKRHRGFGFVTFEHEDVVDRVCE 315
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 316 IHFHTIKNKKVECKKAQPKEA 336
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 133 QIALEQM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
Q + E++ +YFG +G + V ++ + T RGF FI F + + VDK++ KV + +D
Sbjct: 177 QTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDKVL--KVPIHTLDG 234
Query: 192 EVINGEDHRTHGTHQEAKVDGVTTTNQTHGTIREVVGMDNSKVVAGEIKE 241
+ I+ + H K T +N+T V D S A E+K+
Sbjct: 235 KKIDPK-------HATPKNRPKTQSNKTKKIFVGGVSQDTS---AEEVKQ 274
>gi|151945512|gb|EDN63753.1| cleavage and polyadenylation factor CF I component involved in
pre-mRNA 3'-end processing [Saccharomyces cerevisiae
YJM789]
gi|190407229|gb|EDV10496.1| nuclear polyadenylated RNA-binding protein 4 [Saccharomyces
cerevisiae RM11-1a]
gi|207341455|gb|EDZ69508.1| YOL123Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270127|gb|EEU05357.1| Hrp1p [Saccharomyces cerevisiae JAY291]
Length = 534
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 96/149 (64%), Gaps = 10/149 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D+L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VDE +
Sbjct: 160 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 219
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PR+ + + K+ + E ++F Q+GTI ++ +
Sbjct: 220 Q-HILDGKVIDPKRAIPRDEQ-DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLD 277
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
K+TG RGF F+ +D D VD++ +K +
Sbjct: 278 KDTGQSRGFGFVTYDSADAVDRVCQNKFI 306
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T +SRGFGF+TY + VD N
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
+ + R +E KRA PR ++ +
Sbjct: 304 KFIDFKDRKIEIKRAEPRHMQQK 326
>gi|291405742|ref|XP_002719144.1| PREDICTED: musashi 2-like [Oryctolagus cuniculus]
Length = 306
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 91/145 (62%), Gaps = 11/145 (7%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNMV 154
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E ++
Sbjct: 61 HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 120
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
+K T RGF F+ F++ DVV+K+
Sbjct: 121 FDKTTNRHRGFGFVTFENEDVVEKV 145
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMFPPGTR 175
>gi|367007988|ref|XP_003688723.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
gi|357527033|emb|CCE66289.1| hypothetical protein TPHA_0P01310 [Tetrapisispora phaffii CBS 4417]
Length = 518
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 97/155 (62%), Gaps = 10/155 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D+L+ +F ++G +V++ +MKD T RSRGFGF+T+ + VDE +
Sbjct: 165 KMFIGGLNWETTEDTLRDYFNKYGSVVELKIMKDNNTGRSRGFGFLTFENASSVDEVVKT 224
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PRE + + K+ + E ++F QYGTI ++ +
Sbjct: 225 Q-HILDGKVIDPKRAIPREEQ-DKTGKIFVGGIGADVRPKEFEEFFAQYGTIIDAQLMLD 282
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
K+TG RGF F+ +D D VD++ K + + Q
Sbjct: 283 KDTGRSRGFGFVTYDSPDAVDRVCQSKYIEFKGKQ 317
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF Q+G I+D +M D T RSRGFGF+TY VD +
Sbjct: 249 KIFVGGIGADVRPKEFEEFFAQYGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQS 308
Query: 105 RPHEIDGRVVETKRAVPR 122
+ E G+ +E KRA PR
Sbjct: 309 KYIEFKGKQIEIKRAEPR 326
>gi|401623736|gb|EJS41824.1| hrp1p [Saccharomyces arboricola H-6]
Length = 540
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 96/149 (64%), Gaps = 10/149 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D+L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VDE +
Sbjct: 162 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 221
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PR+ + + K+ + E ++F Q+GTI ++ +
Sbjct: 222 Q-HILDGKVIDPKRAIPRDEQ-DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLD 279
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
K+TG RGF F+ +D D VD++ +K +
Sbjct: 280 KDTGQSRGFGFVTYDSADAVDRVCQNKFI 308
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T +SRGFGF+TY + VD N
Sbjct: 246 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 305
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
+ + R +E KRA PR ++ +
Sbjct: 306 KFIDFKDRKIEIKRAEPRHMQQK 328
>gi|171451948|dbj|BAG15902.1| musashi [Dugesia japonica]
Length = 327
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 100/169 (59%), Gaps = 19/169 (11%)
Query: 28 INKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGF 87
+N E+++ E+ +KLFIGGL T ++L+ +F+ +G+I DV+++KDPVTKRSRGF
Sbjct: 1 MNHGFEETEEKYHETNKKLFIGGLSPNTTLETLRNYFQNYGDIKDVMILKDPVTKRSRGF 60
Query: 88 GFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV----------KVRRV-------T 130
GF+T+ E +++ + N PH +D + ++ K A+P++ K R+V
Sbjct: 61 GFVTFIEYSTIEKILLNSPHFLDSKKIDPKIAIPKKPDLVDKSINTEKTRKVFIGGLSNN 120
Query: 131 KVQIALEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
V LE +FG+YG IES ++ +K T RGF F+ F+ ++ + I
Sbjct: 121 TVHKDLEA--FFGKYGKIESCELMMDKSTNRHRGFGFVMFEKEEIANHI 167
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E RK+FIGGL T L+AFF ++G+I +M D T R RGFGF+ + + ++ +
Sbjct: 107 EKTRKVFIGGLSNNTVHKDLEAFFGKYGKIESCELMMDKSTNRHRGFGFVMFEKEEIANH 166
Query: 101 AMSNRPHEIDGRVVETKRAVPREV 124
+ R HEI+ ++VE K+A+P+++
Sbjct: 167 ICNIRYHEINSKMVEAKKALPKDL 190
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+YF YG I+ V ++ + T RGF F+ F +Y ++KI+L+ L+
Sbjct: 35 NYFQNYGDIKDVMILKDPVTKRSRGFGFVTFIEYSTIEKILLNSPHFLD 83
>gi|341889790|gb|EGT45725.1| hypothetical protein CAEBREN_10423 [Caenorhabditis brenneri]
Length = 311
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 96/164 (58%), Gaps = 18/164 (10%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T ++L+ +F ++GE+ + +VM+DP TKR+RGFGFIT+ + VD+ +
Sbjct: 35 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLHA 94
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM-DYFGQYGTIESVNM 153
R HE+DG+ ++ K A P+ + + VTK + LE M YF YG +E +
Sbjct: 95 RDHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAML 154
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGE 197
+ +K T RGF F+ FD +V DK V E+ ING+
Sbjct: 155 MYDKATQRHRGFGFVTFDSDEVADK-------VCEIHFHEINGK 191
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 55/81 (67%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+FIGGL + + +K +FE +G++ D ++M D T+R RGFGF+T+ ++ D+
Sbjct: 123 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCE 182
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+G++VE K+A P+EV
Sbjct: 183 IHFHEINGKMVECKKAQPKEV 203
>gi|395845801|ref|XP_003795610.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Otolemur
garnettii]
Length = 324
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 90/145 (62%), Gaps = 11/145 (7%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNMV 154
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E ++
Sbjct: 61 HHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLM 120
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
+K T RGF F+ F+ DVV+K+
Sbjct: 121 FDKTTNRHRGFGFVTFESEDVVEKV 145
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 88 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFESEDVVEKVCE 147
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMFPPGTR 175
>gi|406601704|emb|CCH46665.1| putative RNA-binding protein [Wickerhamomyces ciferrii]
Length = 479
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 95/142 (66%), Gaps = 8/142 (5%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGLD+ T+++ LK +F ++GE++D +M++ T RSRGFGF+T++E + VDE +
Sbjct: 129 KMFIGGLDWDTSEERLKEYFSKFGEVIDHTIMRESSTGRSRGFGFLTFAEPRSVDEVVKT 188
Query: 105 RPHEIDGRVVETKRAVPREV--KVRRVTKVQIALEQM-----DYFGQYGTIESVNMVTNK 157
H +DG+V++ KRA+PR+ K ++ IA E ++FG++GTI ++ +K
Sbjct: 189 E-HVLDGKVIDPKRAIPRDEQDKTGKIFVGGIAPEVRPKEFENFFGKFGTIIDAQLMLDK 247
Query: 158 ETGAKRGFAFIEFDDYDVVDKI 179
+TG RGF F+ FD D VD++
Sbjct: 248 DTGRSRGFGFVTFDAPDAVDRV 269
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF ++G I+D +M D T RSRGFGF+T+ VD
Sbjct: 213 KIFVGGIAPEVRPKEFENFFGKFGTIIDAQLMLDKDTGRSRGFGFVTFDAPDAVDRVCQG 272
Query: 105 RPHEIDGRVVETKRAVPR 122
R + +GR +E KRA PR
Sbjct: 273 RYLDFNGRQIEVKRAEPR 290
>gi|157112076|ref|XP_001651782.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878175|gb|EAT42400.1| AAEL006057-PA [Aedes aegypti]
Length = 482
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 91/146 (62%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ + L +F +G++ DV++MKDP+T+RSRGFGFIT+ E VD+ +
Sbjct: 103 KLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDKVLKV 162
Query: 105 RPHEIDGRVVETKRAVP-----------REVKVRRVTKVQIALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P +++ V V++ A E YF Q+G ++ M
Sbjct: 163 PIHTLDGKKIDPKHATPKNRPKTQSNKTKKIFVGGVSQDTSAEEVRQYFSQFGKVDETVM 222
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 223 LMDQQTKRHRGFGFVTFENEDVVDRV 248
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ + ++ +F Q+G++ + V++ D TKR RGFGF+T+ +VD
Sbjct: 191 KKIFVGGVSQDTSAEEVRQYFSQFGKVDETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 250
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 251 IHFHTIKNKKVECKKAQPKEA 271
>gi|308510723|ref|XP_003117544.1| hypothetical protein CRE_00749 [Caenorhabditis remanei]
gi|308238190|gb|EFO82142.1| hypothetical protein CRE_00749 [Caenorhabditis remanei]
Length = 336
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 26/171 (15%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
M Q P LRKLFIGGL + T D+ L +F QWG +VD +V++DP TK SRGFGF+
Sbjct: 57 GMGQYQHDSPPQLRKLFIGGLSHETTDEQLGNYFSQWGPVVDAIVIRDPTTKHSRGFGFV 116
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK-----------------VQ 133
T++ + AM++RPH++ G+ V++KRA+PRE + +
Sbjct: 117 TFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLSGIT 176
Query: 134 IALEQMD----YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+ +D YF +GT++ V ++ G RG F+ ++D + D+ +
Sbjct: 177 SGIHSVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCL 222
>gi|242347894|gb|ACS92717.1| musashi-like protein 2L [Ambystoma mexicanum]
Length = 406
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 100/161 (62%), Gaps = 13/161 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQ 81
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFDQFGKVEDAML 141
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
+ +K T RGF F+ F+ DVV+K+ ++ E++ +++
Sbjct: 142 MFDKTTNRHRGFGFVTFEIEDVVEKVC--EIHFHEINNKMV 180
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFDQFGKVEDAMLMFDKTTNRHRGFGFVTFEIEDVVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|392343305|ref|XP_003754847.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2-like [Rattus norvegicus]
gi|392355808|ref|XP_003752141.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2-like [Rattus norvegicus]
Length = 264
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 98/159 (61%), Gaps = 17/159 (10%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E L+K+FIGGL ++T ++ L++ FE+W + D VVM+ P TKRSR FGF+ Y+ + V
Sbjct: 9 ELEQLQKVFIGGLSFKTTNEGLRSHFEEWETLTDCVVMRAPNTKRSRVFGFVIYATVEEV 68
Query: 99 DEAMSNRPHEIDG-RVVETKRAVPREVKVR---RVTKVQIALEQM----------DYFGQ 144
D A++ RPH +DG VVE+KRA+ RE R +T I L+ + DYF Q
Sbjct: 69 DAAINARPHXVDGSSVVESKRALSREDSQRLGAHLTVKNIFLDVIKEDTEEHHLQDYFEQ 128
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
Y IE + ++ ++ +G KR + FDD D VDKIV+ K
Sbjct: 129 YSKIEVIEIMPDRGSGKKR---XVTFDDKDSVDKIVIQK 164
>gi|17136826|ref|NP_476935.1| RNA-binding protein 4 [Drosophila melanogaster]
gi|7299787|gb|AAF54966.1| RNA-binding protein 4 [Drosophila melanogaster]
Length = 428
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 26/169 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E LRK+FIGGL +T ++L+ FF Q+G + D VV++DPV+ SRGFGF+TY + K V+
Sbjct: 29 EHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEI 88
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRR----------------VTKVQIALEQM----- 139
RPH ID ++VETK A+PR+ R + +I L +
Sbjct: 89 VQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHD 148
Query: 140 -----DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+YF Q+G + SV ++ ++ETG +R F F+EF D +K + +
Sbjct: 149 ENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPR 197
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 46/77 (59%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+++F+GGL +++ ++ +F Q+G + V ++ D T R R FGF+ + + ++A++
Sbjct: 136 KRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALA 195
Query: 104 NRPHEIDGRVVETKRAV 120
R H I +VE KR+
Sbjct: 196 PRKHWILQTLVEVKRST 212
>gi|296211878|ref|XP_002752596.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Callithrix
jacchus]
Length = 327
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 81/121 (66%), Gaps = 13/121 (10%)
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR------- 128
M+DP TKRSRGFGF+TY+ + VD AM+ RPH++DGRVVE KRAV RE R
Sbjct: 1 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVK 60
Query: 129 ---VTKVQIALEQ---MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD 182
V ++ E+ DYF QYG IE + ++T++ +G KRGFAF+ FDD+D VDKIV+
Sbjct: 61 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 120
Query: 183 K 183
K
Sbjct: 121 K 121
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 33 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 90
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 91 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 139
>gi|395746892|ref|XP_003778531.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like [Pongo abelii]
Length = 254
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 66/84 (78%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL++ T ++SL++ FEQWG + D VVM+DP TK S GFGF+TY+ + V
Sbjct: 9 EPEQLRKLFIGGLNFETTNESLRSHFEQWGTLTDCVVMRDPSTKCSWGFGFVTYAPVEAV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D AM+ RPH++DGR VE +RAV R
Sbjct: 69 DAAMNARPHKVDGRAVEXQRAVSR 92
>gi|119617173|gb|EAW96767.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_g [Homo
sapiens]
Length = 319
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 81/121 (66%), Gaps = 13/121 (10%)
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR------- 128
M+DP TKRSRGFGF+TY+ + VD AM+ RPH++DGRVVE KRAV RE R
Sbjct: 1 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVK 60
Query: 129 ---VTKVQIALEQ---MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD 182
V ++ E+ DYF QYG IE + ++T++ +G KRGFAF+ FDD+D VDKIV+
Sbjct: 61 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 120
Query: 183 K 183
K
Sbjct: 121 K 121
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 33 KVDGRVVEPKRAVSR--EDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIE 90
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 91 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 139
>gi|19528161|gb|AAL90195.1| AT27014p [Drosophila melanogaster]
Length = 428
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 26/169 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E LRK+FIGGL +T ++L+ FF Q+G + D VV++DPV+ SRGFGF+TY + K V+
Sbjct: 29 EHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEI 88
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRR----------------VTKVQIALEQM----- 139
RPH ID ++VETK A+PR+ R + +I L +
Sbjct: 89 VQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHD 148
Query: 140 -----DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+YF Q+G + SV ++ ++ETG +R F F+EF D +K + +
Sbjct: 149 ENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPR 197
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 46/77 (59%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+++F+GGL +++ ++ +F Q+G + V ++ D T R R FGF+ + + ++A++
Sbjct: 136 KRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALA 195
Query: 104 NRPHEIDGRVVETKRAV 120
R H I +VE KR+
Sbjct: 196 PRKHWILQTLVEVKRST 212
>gi|604437|gb|AAC47508.1| testis-specific-RRM-protein [Drosophila melanogaster]
Length = 428
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 26/169 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E LRK+FIGGL +T ++L+ FF Q+G + D VV++DPV+ SRGFGF+TY + K V+
Sbjct: 29 EHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEI 88
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRR----------------VTKVQIALEQM----- 139
RPH ID ++VETK A+PR+ R + +I L +
Sbjct: 89 VQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHD 148
Query: 140 -----DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+YF Q+G + SV ++ ++ETG +R F F+EF D +K + +
Sbjct: 149 ENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPR 197
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 46/77 (59%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+++F+GGL +++ ++ +F Q+G + V ++ D T R R FGF+ + + ++A++
Sbjct: 136 KRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALA 195
Query: 104 NRPHEIDGRVVETKRAV 120
R H I +VE KR+
Sbjct: 196 PRKHWILQTLVEVKRST 212
>gi|55250278|gb|AAH85474.1| Hnrpa3 protein [Mus musculus]
Length = 313
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 81/121 (66%), Gaps = 13/121 (10%)
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR-----VT 130
M+DP TKRSRGFGF+TYS + VD AM RPH++DGRVVE KRAV RE V+ V
Sbjct: 1 MRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVK 60
Query: 131 KVQIA--------LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD 182
K+ + DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+
Sbjct: 61 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 120
Query: 183 K 183
K
Sbjct: 121 K 121
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 58 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 117
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 118 VVQKYHTINGHNCEVKKALSKQ 139
>gi|312378143|gb|EFR24795.1| hypothetical protein AND_10386 [Anopheles darlingi]
Length = 486
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 90/146 (61%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL ++T+ + L +F +G + DV++MKDPVT+RSRGFGFIT+ E VD+ +
Sbjct: 112 KLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDKVLQV 171
Query: 105 RPHEIDGRVVETKRAVP-----------REVKVRRVTKVQIALEQMDYFGQYGTIESVNM 153
H +DG+ ++ K A P +++ V V++ A E YF Q+G +E M
Sbjct: 172 PIHTLDGKKIDPKHATPKNRPKTQSNKTKKIFVGGVSQDTSAEEVKAYFSQFGKVEETVM 231
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +++T RGF F+ F++ DVVD++
Sbjct: 232 LMDQQTKRHRGFGFVTFENEDVVDRV 257
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ + +KA+F Q+G++ + V++ D TKR RGFGF+T+ +VD
Sbjct: 200 KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCE 259
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A P+E
Sbjct: 260 IHFHTIKNKKVECKKAQPKEA 280
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 133 QIALEQM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
Q + E++ +YFG +GT+ V ++ + T RGF FI F + + VDK VL+V
Sbjct: 121 QTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDK-------VLQVPI 173
Query: 192 EVINGEDHRTHGTHQEAKVDGVTTTNQT 219
++G+ + H K T +N+T
Sbjct: 174 HTLDGK--KIDPKHATPKNRPKTQSNKT 199
>gi|344246565|gb|EGW02669.1| Heterogeneous nuclear ribonucleoprotein A3 [Cricetulus griseus]
Length = 261
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 81/121 (66%), Gaps = 13/121 (10%)
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVT 130
M+DP TKRSRGFGF+TYS + VD AM RPH++DGRVVE KRAV RE V+ V
Sbjct: 1 MRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVK 60
Query: 131 KVQIA--------LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD 182
K+ + DYF +YG IE++ ++ ++++G KRGFAF+ FDD+D VDKIV+
Sbjct: 61 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ 120
Query: 183 K 183
K
Sbjct: 121 K 121
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 54/82 (65%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 58 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 117
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H I+G E K+A+ ++
Sbjct: 118 VVQKYHTINGHNCEVKKALSKQ 139
>gi|395546377|ref|XP_003775064.1| PREDICTED: uncharacterized protein LOC100925827 [Sarcophilus
harrisii]
Length = 471
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 94/159 (59%), Gaps = 13/159 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLF+GGL+ +T++ L+ FE +G + D VVM +P T RSR FGFI++S K DEA+
Sbjct: 17 LCKLFVGGLNPQTDEFGLRKHFEAFGSLTDCVVMMNPQTNRSRCFGFISFSTMKEADEAV 76
Query: 103 SNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD--------YFGQYGTIE 149
+ PH +DG VE KRAV RE R RV K+ + + D +F Q+G +E
Sbjct: 77 AAAPHIVDGNHVELKRAVAREDSCRPGAHARVKKIFVGGLKSDMVESDLVEHFSQFGPVE 136
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
++ +K++G KRGF F+ F D+D DK + K ++
Sbjct: 137 RAKIILHKQSGKKRGFGFVYFFDHDTADKAAVVKFHPIQ 175
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
++K+F+GGL + L F Q+G + ++ + + RGFGF+ + + D+A
Sbjct: 108 VKKIFVGGLKSDMVESDLVEHFSQFGPVERAKIILHKQSGKKRGFGFVYFFDHDTADKAA 167
Query: 103 SNRPHEIDGRVVETKRAVPRE 123
+ H I G +E ++A+P+E
Sbjct: 168 VVKFHPIQGHRIEVRKALPKE 188
>gi|50305631|ref|XP_452776.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641909|emb|CAH01627.1| KLLA0C12925p [Kluyveromyces lactis]
Length = 570
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 113/196 (57%), Gaps = 18/196 (9%)
Query: 12 VPGLEVAGTVVPLAMIINKAMEDSQCSEPESLR--------KLFIGGLDYRTNDDSLKAF 63
+PG+ + L +++ + + EP++++ K+FIGGL++ T ++ L+ +
Sbjct: 146 MPGMPDMSQLQQLQQTMSQLQQTASQHEPKAIKADLSRDINKMFIGGLNWETTEEGLRDY 205
Query: 64 FEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
F ++G + +V +MKD T RSRGFGF+T+ + VDE + + H +DG+V++ KRA+PRE
Sbjct: 206 FSKYGAVAEVKIMKDTATGRSRGFGFLTFENASSVDEVVKTQ-HILDGKVIDPKRAIPRE 264
Query: 124 VKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDV 175
+ + K+ + E ++F Q+G+I ++ +K+TG RGF FI +D D
Sbjct: 265 EQ-DKTGKIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFITYDTPDA 323
Query: 176 VDKIVLDKVVVLEVDQ 191
VD++ +K + + Q
Sbjct: 324 VDRVCQNKFIEFKGKQ 339
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T RSRGFGFITY VD N
Sbjct: 271 KIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFITYDTPDAVDRVCQN 330
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQ 138
+ E G+ +E KRA PR+++ ++ ++ + Q
Sbjct: 331 KFIEFKGKQIEIKRAEPRQLQKQKQPQMTQPMGQ 364
>gi|301121326|ref|XP_002908390.1| heterogeneous nuclear ribonucleoprotein A1, putative [Phytophthora
infestans T30-4]
gi|262103421|gb|EEY61473.1| heterogeneous nuclear ribonucleoprotein A1, putative [Phytophthora
infestans T30-4]
Length = 632
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 97/181 (53%), Gaps = 35/181 (19%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L K+FIGGL Y T D+ L+++F +G + D VVMKDP+++RSRGFGFITY++ VD A+
Sbjct: 7 LGKIFIGGLSYETTDEKLRSYFGAYGTVTDAVVMKDPISRRSRGFGFITYADPLCVDRAL 66
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRRV------TKVQ----------------------- 133
+ H +D R VE KRAVPR +R + ++V
Sbjct: 67 AQPNHILDSRRVEAKRAVPRAESMRDIGNSASSSRVNGSTSISSISANSAVGATKKIFVG 126
Query: 134 -IALEQMD-----YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+ E D YF QYG + S ++ N+ET RGF F+ F+ V+ ++ DK V+
Sbjct: 127 GLHYETKDADFKKYFMQYGKVVSAEVMFNRETNKSRGFGFVIFESEASVELVLQDKNHVI 186
Query: 188 E 188
+
Sbjct: 187 D 187
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL Y T D K +F Q+G++V VM + T +SRGFGF+ + V+ +
Sbjct: 121 KKIFVGGLHYETKDADFKKYFMQYGKVVSAEVMFNRETNKSRGFGFVIFESEASVELVLQ 180
Query: 104 NRPHEIDGRVVETKRAVPRE--VKVRRVTKVQIALEQMDYFGQYGTIESVNMVT 155
++ H IDG+ VE KRAVPR R V+ + G G+++ V+ +T
Sbjct: 181 DKNHVIDGKSVEVKRAVPRTDVPPPRSVSSRGNSFSGPSGPGSVGSLDDVSTIT 234
>gi|327282604|ref|XP_003226032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Anolis carolinensis]
Length = 325
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 97/163 (59%), Gaps = 14/163 (8%)
Query: 31 AMEDSQCSEPESLR---KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGF 87
A + S P+S K+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGF
Sbjct: 5 AAQPGLASPPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGF 64
Query: 88 GFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALE 137
GF+T+ + VD+ ++ HE+D + ++ K A PR + + VT+ V +E
Sbjct: 65 GFVTFVDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVE 124
Query: 138 QM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ YF Q+G ++ ++ +K T RGF F+ F+ D+V+K+
Sbjct: 125 DVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 167
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 110 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 170 IHFHEINNKMVECKKAQPKEV 190
>gi|390608549|dbj|BAM21251.1| musashi homolog protein [Ephydatia fluviatilis]
Length = 362
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 96/164 (58%), Gaps = 17/164 (10%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME +Q + E K+F+GGL + T +D LK +F ++GE+ D V+M+DP+TKR RGFGF+T
Sbjct: 1 MESTQAASIEP-GKIFVGGLSWETTEDGLKQYFSKYGEVSDCVIMQDPMTKRPRGFGFVT 59
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREV-----------KVRRVTKVQIALEQMD 140
+++ V+E M N PH +D + ++ K A + +V++V IA +
Sbjct: 60 FTDQASVEEVMKNGPHTLDNKTIDPKPATMKSATPPSQGGSFNGRVKKVFVGGIAAGTTE 119
Query: 141 -----YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+FGQ+G + +++ +K T RGF F+ FD DVVD++
Sbjct: 120 DDVRSFFGQFGPVTEIDLKFDKATQRMRGFGFVGFDSEDVVDRL 163
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 20 TVVPLAMIINKAMEDSQCSEPES-LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKD 78
T+ P + A SQ ++K+F+GG+ T +D +++FF Q+G + ++ + D
Sbjct: 81 TIDPKPATMKSATPPSQGGSFNGRVKKVFVGGIAAGTTEDDVRSFFGQFGPVTEIDLKFD 140
Query: 79 PVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPR 122
T+R RGFGF+ + +VD H+I+G+ VE K+A PR
Sbjct: 141 KATQRMRGFGFVGFDSEDVVDRLCQIHFHQINGKTVEVKKAEPR 184
>gi|398396946|ref|XP_003851931.1| hypothetical protein MYCGRDRAFT_28846, partial [Zymoseptoria
tritici IPO323]
gi|339471811|gb|EGP86907.1| hypothetical protein MYCGRDRAFT_28846 [Zymoseptoria tritici IPO323]
Length = 161
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 96/151 (63%), Gaps = 10/151 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SLK +F Q+GE+V+ VM+D + RSRGFGF+T+ + K V+ M
Sbjct: 1 KMFIGGLNWETTDQSLKDYFSQFGEVVECTVMRDGQSGRSRGFGFLTFKDPKTVNTVMV- 59
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
+ H +DG++++ KRA+PR+ + R K+ Q A EQ ++F Q+G + ++ +
Sbjct: 60 KEHSLDGKLIDPKRAIPRDEQ-ERTAKIFVGGVSQEATEQDFKEFFMQFGRVLDATLMMD 118
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
K+TG RGF F+ FDD V++ + + +L
Sbjct: 119 KDTGRPRGFGFVTFDDEKAVERTLEGPLAIL 149
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K FF Q+G ++D +M D T R RGFGF+T+ + K V
Sbjct: 79 EQERTAKIFVGGVSQEATEQDFKEFFMQFGRVLDATLMMDKDTGRPRGFGFVTFDDEKAV 138
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ + P I G+ +E KRA PR
Sbjct: 139 ERTLEG-PLAILGKGIEVKRAQPR 161
>gi|308490851|ref|XP_003107617.1| CRE-MSI-1 protein [Caenorhabditis remanei]
gi|308250486|gb|EFO94438.1| CRE-MSI-1 protein [Caenorhabditis remanei]
Length = 335
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 18/164 (10%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T ++L+ +F ++GE+ + +VM+DP TKR+RGFGFIT+ + VD+ ++
Sbjct: 42 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNA 101
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM-DYFGQYGTIESVNM 153
R HE+DG+ ++ K A P+ + + VTK + LE + YF YG +E +
Sbjct: 102 REHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDLKQYFETYGKVEDAML 161
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGE 197
+ +K T RGF F+ FD +V DK V E+ ING+
Sbjct: 162 MYDKATQRHRGFGFVTFDSDEVADK-------VCEIHFHEINGK 198
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 87/164 (53%), Gaps = 20/164 (12%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+FIGGL + + LK +FE +G++ D ++M D T+R RGFGF+T+ ++ D+
Sbjct: 130 KKVFIGGLSATSTLEDLKQYFETYGKVEDAMLMYDKATQRHRGFGFVTFDSDEVADKVCE 189
Query: 104 NRPHEIDGRVVETKRAVPREVKVR-RVTKVQIALEQMDY---------FGQYGTIESVNM 153
HEI+G++VE K+A P+EV + ++ K + A + Y + QY N+
Sbjct: 190 IHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARNLYGMPPETLLAYAQYLPRFGGNL 249
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGE 197
+ G GF F+ FD +V DK V E+ ING+
Sbjct: 250 MY---PGFGNGFGFVTFDSDEVADK-------VCEIHFHEINGK 283
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 86 GFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
GFGF+T+ ++ D+ HEI+G++VE K+A P+E
Sbjct: 257 GFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPKE 294
>gi|327282602|ref|XP_003226031.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Anolis carolinensis]
Length = 352
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 97/163 (59%), Gaps = 14/163 (8%)
Query: 31 AMEDSQCSEPESLR---KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGF 87
A + S P+S K+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGF
Sbjct: 5 AAQPGLASPPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGF 64
Query: 88 GFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALE 137
GF+T+ + VD+ ++ HE+D + ++ K A PR + + VT+ V +E
Sbjct: 65 GFVTFVDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVE 124
Query: 138 QM-DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ YF Q+G ++ ++ +K T RGF F+ F+ D+V+K+
Sbjct: 125 DVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 167
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 110 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVT---KVQIALEQMDYFG------QYGTIESVNMV 154
HEI+ ++VE K+A P+EV + + ++ MD F Y ++
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYA 229
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+ TG G+ + +F ++ V++ L VL
Sbjct: 230 SRSYTGIAPGYTY-QFPEFR-VERTPLPSAPVLP 261
>gi|432877061|ref|XP_004073087.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 88/149 (59%), Gaps = 13/149 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL TNDD L+ FEQ+G ++D V+ +RSR FGF+TY + D AM+
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTYLTPEEADAAMAA 66
Query: 105 RPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGTIESV 151
PH ++G VE KRAVP++ KV+++ K I + + DYF QYG +E+
Sbjct: 67 SPHTVEGNWVEVKRAVPKKQADESEARAKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENS 126
Query: 152 NMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+++ K+TG KRGF F+ F D+ D V
Sbjct: 127 EIMSEKDTGKKRGFGFVHFTDHYAADMAV 155
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 28 INKAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ +A+ Q E E+ ++K+F+GGL +D L +F Q+GE+ + +M + T +
Sbjct: 78 VKRAVPKKQADESEARAKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENSEIMSEKDTGKK 137
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGFGF+ +++ D A++ H ++G VE K++VP++
Sbjct: 138 RGFGFVHFTDHYAADMAVAVPFHTVNGHRVEVKKSVPKQ 176
>gi|119480409|ref|XP_001260233.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
gi|119408387|gb|EAW18336.1| heterogeneous nuclear ribonucleoprotein HRP1 [Neosartorya fischeri
NRRL 181]
Length = 462
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 94/152 (61%), Gaps = 10/152 (6%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
+RK+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 9 IRKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVM 68
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMV 154
H +DG++++ KRA+PR+ + + +K+ Q A EQ ++F Q+G + ++
Sbjct: 69 VKE-HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLM 126
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVVV 186
+K+TG RGF F+ FD V+ + + +
Sbjct: 127 IDKDTGRPRGFGFVTFDSEAAVEAALSRPLAI 158
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 89 EQEKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAV 148
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ A+S RP I G+ +E K+A PR
Sbjct: 149 EAALS-RPLAICGKPIEVKKAQPR 171
>gi|449299976|gb|EMC95989.1| hypothetical protein BAUCODRAFT_511421 [Baudoinia compniacensis
UAMH 10762]
Length = 454
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 94/155 (60%), Gaps = 8/155 (5%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D+SLK +F Q+GE+V+ VM+D T RSRGFGF+T+ + K+V+ M
Sbjct: 1 MFIGGLNWETTDESLKNYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKVVNTVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVKVRR----VTKVQIALEQMD---YFGQYGTIESVNMVTNKE 158
H +DG++++ KRA+PR+ + R V V Q D +F ++G + ++ +KE
Sbjct: 61 -HTLDGKLIDPKRAIPRDEQERTAKIFVGGVSQEASQDDFANFFRRFGNVLDATLMMDKE 119
Query: 159 TGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEV 193
TG RGF F+ FD VD+ + + + + EV
Sbjct: 120 TGRPRGFGFVTFDSEAAVDRTLESPLAICGKNIEV 154
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + D FF ++G ++D +M D T R RGFGF+T+ V
Sbjct: 78 EQERTAKIFVGGVSQEASQDDFANFFRRFGNVLDATLMMDKETGRPRGFGFVTFDSEAAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D + + P I G+ +E KRA PR
Sbjct: 138 DRTLES-PLAICGKNIEVKRAQPR 160
>gi|432858970|ref|XP_004069029.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oryzias
latipes]
Length = 299
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 92/145 (63%), Gaps = 11/145 (7%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL ++T + L+ +F ++GE+ + +VM+DPVTKRSRGFGF+TY++ V++ ++
Sbjct: 1 MFIGGLSWQTTQEGLREYFGKFGEVKECMVMRDPVTKRSRGFGFVTYADQAGVEQVLAQN 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYGTIESVNMV 154
HE+D + ++ K A PR + + VT+ V +E + YF Q+G ++ ++
Sbjct: 61 RHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLM 120
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
+K T RGF F+ F++ DVV+K+
Sbjct: 121 FDKTTNRHRGFGFVTFENEDVVEKV 145
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 88 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 147
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 148 IHFHEINNKMVECKKAQPKEV 168
>gi|344301066|gb|EGW31378.1| hypothetical protein SPAPADRAFT_154438 [Spathaspora passalidarum
NRRL Y-27907]
Length = 507
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 97/152 (63%), Gaps = 10/152 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL++ T ++ L+ +F ++G ++D +M+D T RSRGFGF+T+ + K VDE +
Sbjct: 173 KMFVGGLNWDTTEEGLRDYFSKYGNVLDYTIMRDSATGRSRGFGFLTFEDPKSVDEVIKV 232
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+ RE + RV K+ + E D+F QYG+I ++ +
Sbjct: 233 D-HILDGKLIDPKRAIAREEQD-RVGKIFVGGIDPLVTEKEFYDFFAQYGSIIDAQLMVD 290
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
K+TG RGF FI +D D VD++ ++K + L+
Sbjct: 291 KDTGRSRGFGFITYDSPDAVDRVTVNKYLSLK 322
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E + + K+F+GG+D + FF Q+G I+D +M D T RSRGFGFITY V
Sbjct: 251 EQDRVGKIFVGGIDPLVTEKEFYDFFAQYGSIIDAQLMVDKDTGRSRGFGFITYDSPDAV 310
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D N+ + GR +E KRA PR
Sbjct: 311 DRVTVNKYLSLKGRAMEVKRAEPR 334
>gi|159163803|pdb|2CJK|A Chain A, Structure Of The Rna Binding Domain Of Hrp1 In Complex
With Rna
gi|301598362|pdb|2KM8|C Chain C, Interdomain Rrm Packing Contributes To Rna Recognition In
The Rna15, Hrp1, Anchor Rna 3' Processing Ternary
Complex
Length = 167
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 96/149 (64%), Gaps = 10/149 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D+L+ +F ++G + D+ +MKDP T RSRGFGF+++ + VDE +
Sbjct: 5 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKT 64
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PR+ + + K+ + E ++F Q+GTI ++ +
Sbjct: 65 Q-HILDGKVIDPKRAIPRDEQ-DKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLD 122
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
K+TG RGF F+ +D D VD++ +K +
Sbjct: 123 KDTGQSRGFGFVTYDSADAVDRVCQNKFI 151
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E + K+F+GG+ + FF QWG I+D +M D T +SRGFGF+TY + V
Sbjct: 83 EQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV 142
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D N+ + R +E KRA PR
Sbjct: 143 DRVCQNKFIDFKDRKIEIKRAEPR 166
>gi|448102174|ref|XP_004199739.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359381161|emb|CCE81620.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 98/152 (64%), Gaps = 10/152 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T++ L +F Q+GE+VD +M+D T +SRGFGF+T+ + K V+E +
Sbjct: 162 KMFIGGLNWDTSEQGLVDYFSQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVIK- 220
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
R H +DG++++ KRA+ RE + +V K+ + E D+F Q+G+I ++ +
Sbjct: 221 RDHILDGKLIDPKRAIAREEQ-DKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMID 279
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
K+TG RGF FI +D D VD++ ++K + L+
Sbjct: 280 KDTGRSRGFGFITYDSPDAVDRVTVNKYLTLK 311
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+D N+ FF Q+G I+D +M D T RSRGFGFITY VD N
Sbjct: 246 KIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVN 305
Query: 105 RPHEIDGRVVETKRAVPR 122
+ + G+ +E KRA PR
Sbjct: 306 KYLTLKGKSMEVKRAEPR 323
>gi|432955934|ref|XP_004085635.1| PREDICTED: deleted in azoospermia protein 1-like, partial [Oryzias
latipes]
Length = 502
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 87/152 (57%), Gaps = 13/152 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLFIGGL TNDD L+ FEQ+G + D VV+++ +RSR FGF+TYS + + AM+
Sbjct: 15 KLFIGGLCVNTNDDGLRKHFEQFGTLTDFVVLQNKNAQRSRCFGFVTYSTPEETNAAMAA 74
Query: 105 RPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGTIESV 151
PH ++G VE KRA+P+ K ++ K I + DYF +YG +E
Sbjct: 75 APHTVEGNSVEVKRAIPKAKDNKSEAFAKGEKIFVGGLKNNIKEYHLTDYFSRYGPVEKS 134
Query: 152 NMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
++ KETG KRGF F+ F + D +++K
Sbjct: 135 EILLEKETGKKRGFGFVHFTHHKTADLALVEK 166
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 13/111 (11%)
Query: 86 GFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPR--------EVKVRR--VTKVQIA 135
GFGF+TYS + + AM+ PH + V+ K AVP+ K + V ++
Sbjct: 370 GFGFVTYSTPEETNAAMAASPHTVQRNSVKVKVAVPKGKANGSAAPAKGEKIFVGGLKNN 429
Query: 136 LEQM---DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+E+ +YF +YG +E ++ KETG KRGF F+ F + D +++K
Sbjct: 430 IEEFHLTNYFSRYGQVEKSEILLEKETGKKRGFGFVHFTHHKTADLALVEK 480
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPR--------EVKVRR--VTKVQIAL 136
FGF+TYS + + AM+ PH + V+ K AVP+ K + V ++ +
Sbjct: 214 FGFVTYSTPEETNAAMAAAPHTVQRNSVKVKGAVPKAKANGSAAPAKGEKIFVGGLKNNI 273
Query: 137 EQ---MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
E+ DYF +YG +E ++ KETG KRGF F+ F + D +++K
Sbjct: 274 EEYHLTDYFSRYGPVEKSEILLEKETGKKRGFGFVHFTHHKTADLALVEK 323
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVM 76
V G V + I KA +D++ K+F+GGL + L +F ++G + ++
Sbjct: 79 VEGNSVEVKRAIPKA-KDNKSEAFAKGEKIFVGGLKNNIKEYHLTDYFSRYGPVEKSEIL 137
Query: 77 KDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE-----VKVRRVTK 131
+ T + RGFGF+ ++ K D A+ + H ++G +VE K+AV ++ + +
Sbjct: 138 LEKETGKKRGFGFVHFTHHKTADLALVEKYHTVNGHLVEVKKAVAKQEMQAGNRTETTPR 197
Query: 132 VQIALEQMDYFGQYGTIESVNMVTNKETGA 161
+ M+ YG+ V T +ET A
Sbjct: 198 HKPGPGMMENQNGYGSFGFVTYSTPEETNA 227
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 49/87 (56%)
Query: 37 CSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESK 96
+ P K+F+GGL + L +F ++G++ ++ + T + RGFGF+ ++ K
Sbjct: 412 SAAPAKGEKIFVGGLKNNIEEFHLTNYFSRYGQVEKSEILLEKETGKKRGFGFVHFTHHK 471
Query: 97 MVDEAMSNRPHEIDGRVVETKRAVPRE 123
D A+ + H ++G +VE K+AV ++
Sbjct: 472 TADLALVEKYHTVNGHLVEVKKAVAKQ 498
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%)
Query: 37 CSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESK 96
+ P K+F+GGL + L +F ++G + ++ + T + RGFGF+ ++ K
Sbjct: 255 SAAPAKGEKIFVGGLKNNIEEYHLTDYFSRYGPVEKSEILLEKETGKKRGFGFVHFTHHK 314
Query: 97 MVDEAMSNRPHEIDGRVVETKRAVPRE 123
D A+ + H ++G +VE K+AV ++
Sbjct: 315 TADLALVEKYHTVNGHLVEIKKAVAKQ 341
>gi|156361834|ref|XP_001625489.1| predicted protein [Nematostella vectensis]
gi|156212325|gb|EDO33389.1| predicted protein [Nematostella vectensis]
Length = 164
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 88/150 (58%), Gaps = 15/150 (10%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
RK+F+GGL T+ L+ +FE++GE+ D V+M DPVTKRSR FGFIT+ + +V M
Sbjct: 1 RKIFVGGLAISTDSAGLQGYFEKYGEVTDCVLMTDPVTKRSRCFGFITFRDPSVVQNVMD 60
Query: 104 NRPHEIDGRVVETKRAVPR---------------EVKVRRVTKVQIALEQMDYFGQYGTI 148
++PH++DG++++ K AVPR ++ V + + DYF YG +
Sbjct: 61 DKPHQLDGKMIDPKPAVPRGPGQGPPQGNQNNEFKIFVGGLAHSTSKQDLEDYFTAYGKV 120
Query: 149 ESVNMVTNKETGAKRGFAFIEFDDYDVVDK 178
SVN++ + +T RGF F+ F+ D V K
Sbjct: 121 VSVNLMVDPQTQKMRGFGFVTFESKDSVTK 150
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL + T+ L+ +F +G++V V +M DP T++ RGFGF+T+ V +A
Sbjct: 95 KIFVGGLAHSTSKQDLEDYFTAYGKVVSVNLMVDPQTQKMRGFGFVTFESKDSVTKAADE 154
Query: 105 RPHEIDGRVV 114
H+I+G+ V
Sbjct: 155 HYHQINGKTV 164
>gi|379056197|dbj|BAL68140.1| RNA-binding protein Musashi homolog 1 Long [Danio rerio]
Length = 349
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 93/151 (61%), Gaps = 11/151 (7%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P K+FIGGL ++T + LK +F ++GE+ + +VM+DPVTKRSRGFGF+T+ + VD
Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVD 75
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYGTI 148
+ ++ HE+D + ++ K A PR + + VT+ V +E + YF Q+G +
Sbjct: 76 KVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKV 135
Query: 149 ESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ ++ +K T RGF F+ F++ DVV+K+
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFENEDVVEKV 166
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 169 IHFHEINNKMVECKKAQPKEV 189
>gi|452840783|gb|EME42721.1| hypothetical protein DOTSEDRAFT_73510 [Dothistroma septosporum
NZE10]
Length = 529
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 103/173 (59%), Gaps = 17/173 (9%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D+SLK +F Q+GE+++ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 102 KMFIGGLNWETTDESLKNYFSQFGEVIECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 161
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
H++DG++++ KRA+PR+ + R K+ Q A E ++F ++G + ++ +
Sbjct: 162 E-HQLDGKLIDPKRAIPRDEQ-ERTAKIFVGGVSQDATESDFKEFFMKFGRVLDATLMMD 219
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVIN-------GEDHRTH 202
K+TG RGF F+ FD+ V++ + + +L EV GED TH
Sbjct: 220 KDTGRPRGFGFVTFDNDLAVERTLEGPLSILGKPIEVKRAQPRGKMGEDEPTH 272
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K FF ++G ++D +M D T R RGFGF+T+ V
Sbjct: 180 EQERTAKIFVGGVSQDATESDFKEFFMKFGRVLDATLMMDKDTGRPRGFGFVTFDNDLAV 239
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ + P I G+ +E KRA PR
Sbjct: 240 ERTLEG-PLSILGKPIEVKRAQPR 262
>gi|444730345|gb|ELW70732.1| Chromodomain-helicase-DNA-binding protein 2 [Tupaia chinensis]
Length = 976
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 66/158 (41%), Positives = 90/158 (56%), Gaps = 36/158 (22%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T D+ L++ FEQWG +++ + V
Sbjct: 475 EPEQLRKLFIGGLSFETTDERLRSHFEQWGTLMNCM----------------------EV 512
Query: 99 DEAMSNRPHEIDGRVVETKRAVPRE----------VKVRRVTKVQIALEQ---MDYFGQY 145
D AM+ +PH++DGRVVE KRAV RE VK V ++ E+ D F QY
Sbjct: 513 DAAMNAKPHKVDGRVVEPKRAVSREDSQRLGAHLTVKKIFVGGIKEETEEHHLRDDFEQY 572
Query: 146 GTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
G E + ++T++ +G KRGFAF+ FDD+D VDKIV+ K
Sbjct: 573 GKTEVIKIMTDRGSG-KRGFAFVNFDDHDSVDKIVIQK 609
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 16 EVAGTVVPLAMIINKAMEDSQ-CSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ FEQ+G+ +
Sbjct: 522 KVDGRVVEPKRAVSR--EDSQRLGAHLTVKKIFVGGIKEETEEHHLRDDFEQYGKTEVIK 579
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI 134
+M D + + RGF F+ + + VD+ + + H ++G E K R+ V+
Sbjct: 580 IMTDRGSGK-RGFAFVNFDDHDSVDKIVIQKYHTVNGHNCECK---------ERMRPVKK 629
Query: 135 ALEQMD 140
AL+Q+D
Sbjct: 630 ALKQLD 635
>gi|119618591|gb|EAW98185.1| musashi homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 351
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 92/151 (60%), Gaps = 11/151 (7%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P K+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD
Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYGTI 148
+ ++ HE+D + ++ K A PR + + VT+ V +E + YF Q+G +
Sbjct: 76 KVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 135
Query: 149 ESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ ++ +K T RGF F+ F+ D+V+K+
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 166
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVT---KVQIALEQMDYFG------QYGTIESVNMV 154
HEI+ ++VE K+A P+EV + + ++ MD F Y ++
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYA 228
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+ TG G+ + +F ++ V++ L VL
Sbjct: 229 SRSYTGLAPGYTY-QFPEFR-VERTPLPSAPVLP 260
>gi|403281821|ref|XP_003932373.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Saimiri
boliviensis boliviensis]
Length = 352
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 94/157 (59%), Gaps = 13/157 (8%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
S P S K+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+
Sbjct: 13 SSPTYHPSS--KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFM 70
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYF 142
+ VD+ ++ HE+D + ++ K A PR + + VT+ V +E + YF
Sbjct: 71 DQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYF 130
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
Q+G ++ ++ +K T RGF F+ F+ D+V+K+
Sbjct: 131 EQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 167
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 110 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVT---KVQIALEQMDYFG------QYGTIESVNMV 154
HEI+ ++VE K+A P+EV + + ++ MD F Y ++
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYA 229
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+ TG G+ + +F ++ V++ L VL
Sbjct: 230 SRSYTGLAPGYTY-QFPEFR-VERTPLPSAPVLP 261
>gi|61806598|ref|NP_001013534.1| RNA-binding protein Musashi homolog 1 [Danio rerio]
gi|60688517|gb|AAH90916.1| Musashi homolog 1 (Drosophila) [Danio rerio]
gi|182888902|gb|AAI64361.1| Msi1 protein [Danio rerio]
gi|379056199|dbj|BAL68141.1| RNA-binding protein Musashi homolog 1 Short [Danio rerio]
Length = 330
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 93/151 (61%), Gaps = 11/151 (7%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P K+FIGGL ++T + LK +F ++GE+ + +VM+DPVTKRSRGFGF+T+ + VD
Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVD 75
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYGTI 148
+ ++ HE+D + ++ K A PR + + VT+ V +E + YF Q+G +
Sbjct: 76 KVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKV 135
Query: 149 ESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ ++ +K T RGF F+ F++ DVV+K+
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFENEDVVEKV 166
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +F+Q+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 169 IHFHEINNKMVECKKAQPKEV 189
>gi|154799956|dbj|BAF75023.1| Musashi-1b [Cynops pyrrhogaster]
Length = 346
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 96/159 (60%), Gaps = 14/159 (8%)
Query: 35 SQCSEPESLR---KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
S S P+S K+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T
Sbjct: 8 SGLSPPDSAHDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVT 67
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-D 140
+ + VD+ ++ HE+D + ++ K A PR + + VT+ V +E +
Sbjct: 68 FMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQ 127
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
YF Q+G ++ ++ +K T RGF F+ F+ D+V+K+
Sbjct: 128 YFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKV 166
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 169 IHFHEINNKMVECKKAQPKEV 189
>gi|154799960|dbj|BAF75025.1| Musashi-1d [Cynops pyrrhogaster]
Length = 327
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 96/159 (60%), Gaps = 14/159 (8%)
Query: 35 SQCSEPESLR---KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
S S P+S K+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T
Sbjct: 8 SGLSPPDSAHDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVT 67
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-D 140
+ + VD+ ++ HE+D + ++ K A PR + + VT+ V +E +
Sbjct: 68 FMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQ 127
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
YF Q+G ++ ++ +K T RGF F+ F+ D+V+K+
Sbjct: 128 YFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKV 166
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 169 IHFHEINNKMVECKKAQPKEV 189
>gi|167516158|ref|XP_001742420.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779044|gb|EDQ92658.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 90/163 (55%), Gaps = 27/163 (16%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLFIGGL T D L +F+ +G++VD VVM DP T R+RGFGF+TY + + D +++
Sbjct: 1 KLFIGGLSPETTHDRLLDYFQVFGDVVDCVVMTDPATGRTRGFGFVTYRDGRCCDSVLAH 60
Query: 105 RPHEIDGRVVETKRAVPRE-------------VKVR------RVTKV------QIALEQM 139
RPH +DGR V+ KRAVPR+ K R V KV A +M
Sbjct: 61 RPHVVDGREVDPKRAVPRQEMESSPRSSSATRAKPRSASFTHHVRKVFVGGLPPTATNEM 120
Query: 140 --DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
YF +G +E ++ +K+T RGF F+ F+D + DK+V
Sbjct: 121 LHRYFSHFGGVEEAVIIHDKQTRTPRGFGFVTFEDPIIADKVV 163
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 12/114 (10%)
Query: 21 VVPLAMIINKAMEDSQCS------EPES------LRKLFIGGLDYRTNDDSLKAFFEQWG 68
V P + + ME S S +P S +RK+F+GGL ++ L +F +G
Sbjct: 70 VDPKRAVPRQEMESSPRSSSATRAKPRSASFTHHVRKVFVGGLPPTATNEMLHRYFSHFG 129
Query: 69 EIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPR 122
+ + V++ D T+ RGFGF+T+ + + D+ +S HE G++VE KRA P+
Sbjct: 130 GVEEAVIIHDKQTRTPRGFGFVTFEDPIIADKVVSVHYHEFYGKMVEVKRAEPK 183
>gi|119618593|gb|EAW98187.1| musashi homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 343
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 92/152 (60%), Gaps = 11/152 (7%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
P K+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + V
Sbjct: 15 SPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGV 74
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYGT 147
D+ ++ HE+D + ++ K A PR + + VT+ V +E + YF Q+G
Sbjct: 75 DKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGK 134
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
++ ++ +K T RGF F+ F+ D+V+K+
Sbjct: 135 VDDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 166
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 169 IHFHEINNKMVECKKAQPKEV 189
>gi|4505255|ref|NP_002433.1| RNA-binding protein Musashi homolog 1 [Homo sapiens]
gi|125630689|ref|NP_001074996.1| RNA-binding protein Musashi homolog 1 [Bos taurus]
gi|296213096|ref|XP_002753122.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Callithrix
jacchus]
gi|51316193|sp|O43347.1|MSI1H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|2769698|gb|AAB95636.1| similar to murine RNA-binding protein; 99% similar to D49654
(PID:g1434857) [Homo sapiens]
gi|3786320|dbj|BAA33962.1| Musashi [Homo sapiens]
gi|119618592|gb|EAW98186.1| musashi homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
gi|124358513|dbj|BAF45938.1| RNA-binding protein Musashi-1 [Bos taurus]
gi|147897997|gb|AAI40381.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|148921740|gb|AAI46464.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|208966796|dbj|BAG73412.1| musashi homolog 1 [synthetic construct]
Length = 362
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 92/151 (60%), Gaps = 11/151 (7%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P K+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD
Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYGTI 148
+ ++ HE+D + ++ K A PR + + VT+ V +E + YF Q+G +
Sbjct: 76 KVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 135
Query: 149 ESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ ++ +K T RGF F+ F+ D+V+K+
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 166
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVT---KVQIALEQMDYFG------QYGTIESVNMV 154
HEI+ ++VE K+A P+EV + + ++ MD F Y ++
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYA 228
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+ TG G+ + +F ++ V++ L VL
Sbjct: 229 SRSYTGLAPGYTY-QFPEFR-VERTPLPSAPVLP 260
>gi|297278753|ref|XP_002801608.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Macaca
mulatta]
Length = 130
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 68/96 (70%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME +EPE LRKLFIGGL + T DDS + FE+WG + D VVM+DP TK SRGFG +T
Sbjct: 1 MEGHDPNEPEQLRKLFIGGLSFETTDDSFREHFEKWGTLTDCVVMRDPQTKHSRGFGSVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR 127
S + VD AM +PH++DGRVV+ KRAV RE V+
Sbjct: 61 CSCVEEVDAAMCAQPHKVDGRVVKPKRAVSREDSVK 96
>gi|357618214|gb|EHJ71282.1| hypothetical protein KGM_11355 [Danaus plexippus]
Length = 297
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 90/148 (60%), Gaps = 9/148 (6%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
S KLF+GGL ++T+ + L+ +F +G + DV++MKDPVT+RSRGFGFIT+ E+ VD+
Sbjct: 27 PSPSKLFVGGLSWQTSSEKLREYFAMFGAVTDVLIMKDPVTQRSRGFGFITFQEAASVDK 86
Query: 101 AMSNRPHEIDGRVVETKRAVPREV-KVRRVTKVQI--------ALEQMDYFGQYGTIESV 151
++ H +DG+ ++ K A P+ K + K+ + A E YF Q+G +E
Sbjct: 87 VLAVPVHTLDGKRIDPKHATPKSAPKPAKTKKIFVGGVGQDTSADEVRAYFAQFGAVEDA 146
Query: 152 NMVTNKETGAKRGFAFIEFDDYDVVDKI 179
M+ +++T RGF F+ F + V+++
Sbjct: 147 VMLMDQQTKRHRGFGFVTFHSEEAVERV 174
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%)
Query: 27 IINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
I K +P +K+F+GG+ T+ D ++A+F Q+G + D V++ D TKR RG
Sbjct: 100 IDPKHATPKSAPKPAKTKKIFVGGVGQDTSADEVRAYFAQFGAVEDAVMLMDQQTKRHRG 159
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV 124
FGF+T+ + V+ H I + VE KRA P+E
Sbjct: 160 FGFVTFHSEEAVERVCDIHFHTIKNKKVECKRAQPKEA 197
>gi|154799954|dbj|BAF75022.1| Musashi-1a [Cynops pyrrhogaster]
Length = 361
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 96/159 (60%), Gaps = 14/159 (8%)
Query: 35 SQCSEPESLR---KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
S S P+S K+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T
Sbjct: 8 SGLSPPDSAHDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVT 67
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-D 140
+ + VD+ ++ HE+D + ++ K A PR + + VT+ V +E +
Sbjct: 68 FMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQ 127
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
YF Q+G ++ ++ +K T RGF F+ F+ D+V+K+
Sbjct: 128 YFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKV 166
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 169 IHFHEINNKMVECKKAQPKEV 189
>gi|302307303|ref|NP_983936.2| ADL160Wp [Ashbya gossypii ATCC 10895]
gi|299788936|gb|AAS51760.2| ADL160Wp [Ashbya gossypii ATCC 10895]
gi|374107149|gb|AEY96057.1| FADL160Wp [Ashbya gossypii FDAG1]
Length = 526
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 98/151 (64%), Gaps = 10/151 (6%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
+ K+FIGGL++ T +D+L+ +F ++G + +V +M+D T RSRGFGF++++++ VDE +
Sbjct: 162 INKMFIGGLNWETTEDNLREYFSKYGNVTEVKIMRDGTTGRSRGFGFLSFADASSVDEVV 221
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMV 154
+ H +DG+V++ KRA+PRE + + K+ + E ++F Q+G+I ++
Sbjct: 222 KTQ-HILDGKVIDPKRAIPREEQD-KTGKIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLM 279
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
+K+TG RGF FI +D D VD++ +K +
Sbjct: 280 LDKDTGRSRGFGFITYDSPDAVDRVCQNKFI 310
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 50/88 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T RSRGFGFITY VD N
Sbjct: 248 KIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFITYDSPDAVDRVCQN 307
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV 132
+ E G+ +E KRA PR+V+ +R T
Sbjct: 308 KFIEFKGKRIEIKRAEPRQVQKQRTTNA 335
>gi|22507308|ref|NP_683688.1| RNA-binding protein Musashi homolog 1 [Rattus norvegicus]
gi|51316134|sp|Q8K3P4.1|MSI1H_RAT RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|22073952|gb|AAK94485.1| RNA-binding protein Musashi-1 [Rattus norvegicus]
Length = 362
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 92/151 (60%), Gaps = 11/151 (7%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P K+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD
Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQMD-YFGQYGTI 148
+ ++ HE+D + ++ K A PR + + VT+ V +E + YF Q+G +
Sbjct: 76 KVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKV 135
Query: 149 ESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ ++ +K T RGF F+ F+ D+V+K+
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 166
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVT---KVQIALEQMDYFG------QYGTIESVNMV 154
HEI+ ++VE K+A P+EV + + ++ MD F Y ++
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYA 228
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+ TG G+ + +F ++ V++ L VL
Sbjct: 229 SRSYTGLAPGYTY-QFPEFR-VERTPLPSAPVLP 260
>gi|296478518|tpg|DAA20633.1| TPA: musashi 1 [Bos taurus]
Length = 342
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 92/151 (60%), Gaps = 11/151 (7%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P K+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD
Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYGTI 148
+ ++ HE+D + ++ K A PR + + VT+ V +E + YF Q+G +
Sbjct: 76 KVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 135
Query: 149 ESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ ++ +K T RGF F+ F+ D+V+K+
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 166
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVT---KVQIALEQMDYFG------QYGTIESVNMV 154
HEI+ ++VE K+A P+EV + + ++ MD F Y ++
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYA 228
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+ TG G+ + +F ++ V++ L VL
Sbjct: 229 SRSYTGLAPGYTY-QFPEFR-VERTPLPSAPVLP 260
>gi|154799958|dbj|BAF75024.1| Musashi-1c [Cynops pyrrhogaster]
Length = 342
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 96/159 (60%), Gaps = 14/159 (8%)
Query: 35 SQCSEPESLR---KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
S S P+S K+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T
Sbjct: 8 SGLSPPDSAHDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVT 67
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-D 140
+ + VD+ ++ HE+D + ++ K A PR + + VT+ V +E +
Sbjct: 68 FMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQ 127
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
YF Q+G ++ ++ +K T RGF F+ F+ D+V+K+
Sbjct: 128 YFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKV 166
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEVEDIVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 169 IHFHEINNKMVECKKAQPKEV 189
>gi|6678940|ref|NP_032655.1| RNA-binding protein Musashi homolog 1 [Mus musculus]
gi|51316207|sp|Q61474.1|MSI1H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|1434857|dbj|BAA08530.1| RNA-binding protein [Mus musculus]
gi|147897761|gb|AAI40423.1| Musashi homolog 1(Drosophila) [synthetic construct]
gi|148921876|gb|AAI46539.1| Musashi homolog 1(Drosophila) [synthetic construct]
Length = 362
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 92/151 (60%), Gaps = 11/151 (7%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P K+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD
Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQMD-YFGQYGTI 148
+ ++ HE+D + ++ K A PR + + VT+ V +E + YF Q+G +
Sbjct: 76 KVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKV 135
Query: 149 ESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ ++ +K T RGF F+ F+ D+V+K+
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 166
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVT---KVQIALEQMDYFG------QYGTIESVNMV 154
HEI+ ++VE K+A P+EV + + ++ MD F Y ++
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYA 228
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEV 189
+ TG G+ + +F ++ V + V+ E+
Sbjct: 229 SRSYTGLAPGYTY-QFPEFRVERSPLPSAPVLPEL 262
>gi|195329212|ref|XP_002031305.1| GM25919 [Drosophila sechellia]
gi|194120248|gb|EDW42291.1| GM25919 [Drosophila sechellia]
Length = 421
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 95/169 (56%), Gaps = 26/169 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E LRK+FIGGL +T+ ++L+ FF Q+G + D VVM+DPV+ SRGFGF+T+ + K V+
Sbjct: 29 EHLRKIFIGGLSTQTSMETLREFFSQFGVVSDAVVMRDPVSNHSRGFGFVTFVDPKSVEI 88
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRR----------------VTKVQIALEQM----- 139
RPH ID ++VETK A+PR+ R V +I L +
Sbjct: 89 VQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGFEAGFVNSKRIFLGGLKEYHD 148
Query: 140 -----DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+YF Q+G + SV ++ ++ETG +R F F+EF D +K + +
Sbjct: 149 EKVVREYFSQFGPVASVKLLIDRETGRQRAFGFLEFVDPLSAEKALAPR 197
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+++F+GGL ++ ++ +F Q+G + V ++ D T R R FGF+ + + ++A++
Sbjct: 136 KRIFLGGLKEYHDEKVVREYFSQFGPVASVKLLIDRETGRQRAFGFLEFVDPLSAEKALA 195
Query: 104 NRPHEIDGRVVETKRAV 120
R H I +VE KR+
Sbjct: 196 PRKHWILQTLVEVKRST 212
>gi|448098292|ref|XP_004198889.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
gi|359380311|emb|CCE82552.1| Piso0_002282 [Millerozyma farinosa CBS 7064]
Length = 485
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 98/152 (64%), Gaps = 10/152 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T++ L +F Q+GE+VD +M+D T +SRGFGF+T+ + K V+E +
Sbjct: 162 KMFIGGLNWDTSEQGLVDYFTQFGEVVDYTIMRDNATGKSRGFGFLTFKDPKSVEEVIK- 220
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
R H +DG++++ KRA+ RE + +V K+ + E D+F Q+G+I ++ +
Sbjct: 221 RDHILDGKLIDPKRAIAREEQ-DKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMID 279
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
K+TG RGF FI +D D VD++ ++K + L+
Sbjct: 280 KDTGRSRGFGFITYDSPDAVDRVTVNKYLTLK 311
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+D N+ FF Q+G I+D +M D T RSRGFGFITY VD N
Sbjct: 246 KIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVN 305
Query: 105 RPHEIDGRVVETKRAVPR 122
+ + G+ +E KRA PR
Sbjct: 306 KYLTLKGKSMEVKRAEPR 323
>gi|146197870|dbj|BAF57645.1| hnRNP A2/B1 protein [Dugesia japonica]
Length = 386
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 90/154 (58%), Gaps = 13/154 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
+K+F+GGL +T + ++ +F ++G++ DVV M+D +SRGFGF+ + E++ VD
Sbjct: 17 FKKIFVGGLPPQTTESDMRQYFSKYGDVCDVVAMRDKTGNKSRGFGFVVFKEAESVDRCQ 76
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRR-------------VTKVQIALEQMDYFGQYGTIE 149
+ RPH++ G++V+TKRA+P+E + + + + DYF +G I
Sbjct: 77 AERPHQLLGKIVDTKRAMPKEESLNPDIHCNSKRIFIGGIRRFFTEDDLKDYFSTFGEIV 136
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+ + +G RGFAFI F D D+VDK++L K
Sbjct: 137 DCTIKRDNVSGLSRGFAFITFTDRDIVDKVILSK 170
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 63/100 (63%), Gaps = 4/100 (4%)
Query: 30 KAMEDSQCSEPE---SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+AM + P+ + +++FIGG+ +D LK +F +GEIVD + +D V+ SRG
Sbjct: 92 RAMPKEESLNPDIHCNSKRIFIGGIRRFFTEDDLKDYFSTFGEIVDCTIKRDNVSGLSRG 151
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAV-PREVK 125
F FIT+++ +VD+ + ++PH I +V+ K+A+ P E++
Sbjct: 152 FAFITFTDRDIVDKVILSKPHAIRHCIVDVKKALSPEELR 191
>gi|225563097|gb|EEH11376.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus G186AR]
Length = 410
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 98/160 (61%), Gaps = 10/160 (6%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
+C ++L K+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ +
Sbjct: 146 ECISDDALDKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDP 205
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGT 147
K V+ M + H +DG++++ KRA+PR+ + R +K+ Q A EQ +F Q+G
Sbjct: 206 KTVNTVMV-KEHYLDGKIIDPKRAIPRDEQ-ERTSKIFVGGVSQEATEQDFKQFFMQFGR 263
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+ ++ +K++G RGF F+ FD V+ + + +L
Sbjct: 264 VVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEIL 303
>gi|341874087|gb|EGT30022.1| hypothetical protein CAEBREN_23175 [Caenorhabditis brenneri]
Length = 335
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 26/171 (15%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
M Q P LRKLFIGGL + T D+ L +F QWG +VD +V++DP TK SRGFGF+
Sbjct: 57 GMGQYQHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFV 116
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK-----------------VQ 133
T++ + AM++RPH++ G+ V++KRA+PRE + +
Sbjct: 117 TFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGIT 176
Query: 134 IALEQMD----YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+ +D YF +GT++ V ++ G RG F+ ++D + D+ +
Sbjct: 177 HGVHSVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCL 222
>gi|392465146|dbj|BAM24697.1| musashi homolog 1 [Sus scrofa]
Length = 362
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 91/146 (62%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD+ ++
Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ V +E + YF Q+G ++ +
Sbjct: 81 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 140
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +K T RGF F+ F+ D+V+K+
Sbjct: 141 MFDKTTNRHRGFGFVTFESEDIVEKV 166
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVT---KVQIALEQMDYFG------QYGTIESVNMV 154
HEI+ ++VE K+A P+EV + + ++ MD F Y ++
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYA 228
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+ TG G+ + +F ++ V++ L VL
Sbjct: 229 SRSYTGLAPGYTY-QFPEFR-VERTPLPSAPVLP 260
>gi|444317072|ref|XP_004179193.1| hypothetical protein TBLA_0B08590 [Tetrapisispora blattae CBS 6284]
gi|387512233|emb|CCH59674.1| hypothetical protein TBLA_0B08590 [Tetrapisispora blattae CBS 6284]
Length = 623
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 104/180 (57%), Gaps = 10/180 (5%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D L+ +F ++G +VD+ +MKD T +SRGFGF+T+ +S VDE +
Sbjct: 171 KMFIGGLNWETTEDGLRDYFNKYGNVVDLKIMKDNNTGKSRGFGFLTFEKSSSVDEVVKT 230
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PRE + + K+ I E ++F +YG I ++ +
Sbjct: 231 Q-HILDGKVIDPKRAIPREEQ-DKTGKIFIGGIGADVRPKEFEEFFAKYGNIIDAQLMLD 288
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGEDHRTHGTHQEAKVDGVTTT 216
K+TG RGF F+ +D D VD++ K + + Q I R + Q + D T+
Sbjct: 289 KDTGRSRGFGFVTYDSPDAVDRVCQHKFIEFKGKQIEIKRAQPRHNQPRQTQEYDQNTSN 348
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E + K+FIGG+ + FF ++G I+D +M D T RSRGFGF+TY V
Sbjct: 249 EQDKTGKIFIGGIGADVRPKEFEEFFAKYGNIIDAQLMLDKDTGRSRGFGFVTYDSPDAV 308
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRV 129
D ++ E G+ +E KRA PR + R+
Sbjct: 309 DRVCQHKFIEFKGKQIEIKRAQPRHNQPRQT 339
>gi|348584450|ref|XP_003477985.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cavia
porcellus]
Length = 366
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 91/146 (62%), Gaps = 11/146 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD+ ++
Sbjct: 25 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 84
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ V +E + YF Q+G ++ +
Sbjct: 85 SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAML 144
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKI 179
+ +K T RGF F+ F+ D+V+K+
Sbjct: 145 MFDKTTNRHRGFGFVTFESEDIVEKV 170
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 113 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 172
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVT---KVQIALEQMDYFG------QYGTIESVNMV 154
HEI+ ++VE K+A P+EV + + ++ MD F Y ++
Sbjct: 173 IHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYA 232
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+ TG G+ + +F ++ V++ L VL
Sbjct: 233 SRSYTGLAPGYTY-QFPEFR-VERTPLPSAPVLP 264
>gi|50294199|ref|XP_449511.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528825|emb|CAG62487.1| unnamed protein product [Candida glabrata]
Length = 513
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 91/143 (63%), Gaps = 10/143 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D L+ +F ++G +V++ +MKDP T RSRGFGF+++ VDE +
Sbjct: 131 KMFIGGLNWETTEDGLREYFSKYGNVVELKIMKDPNTGRSRGFGFLSFDAPSSVDEVVKT 190
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PRE + + K+ + E +YF Q+GTI ++ +
Sbjct: 191 Q-HILDGKVIDPKRAIPREEQD-KTGKIFVGGLGTDVRPKEFEEYFSQWGTIIDAQLMLD 248
Query: 157 KETGAKRGFAFIEFDDYDVVDKI 179
K+TG RGF F+ +D D +K+
Sbjct: 249 KDTGRSRGFGFVTYDSPDAAEKV 271
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL + +F QWG I+D +M D T RSRGFGF+TY ++ +
Sbjct: 215 KIFVGGLGTDVRPKEFEEYFSQWGTIIDAQLMLDKDTGRSRGFGFVTYDSPDAAEKVCES 274
Query: 105 RPHEIDGRVVETKRAVPR 122
R E G+ +E KRA PR
Sbjct: 275 RYREFKGKQIEIKRAEPR 292
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF +YG + + ++ + TG RGF F+ FD VD++V
Sbjct: 148 EYFSKYGNVVELKIMKDPNTGRSRGFGFLSFDAPSSVDEVV 188
>gi|330939341|ref|XP_003305832.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
gi|311316974|gb|EFQ86065.1| hypothetical protein PTT_18782 [Pyrenophora teres f. teres 0-1]
Length = 562
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 94/151 (62%), Gaps = 10/151 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T ++SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 106 KMFIGGLNWETTEESLKNYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMVK 165
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+PRE + R +K+ Q A E+ ++F Q+G + ++ +
Sbjct: 166 E-HYLDGKIIDPKRAIPREEQ-ERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMD 223
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
KETG RGF F+ FD VD + + +L
Sbjct: 224 KETGRPRGFGFVTFDGDAAVDATLRAPLQIL 254
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ ++ FF+Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 184 EQERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAV 243
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D + P +I G+ +E KRA PR
Sbjct: 244 DATLR-APLQILGKQIEVKRAQPR 266
>gi|149639709|ref|XP_001515278.1| PREDICTED: hypothetical protein LOC100084860 [Ornithorhynchus
anatinus]
Length = 327
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 61/77 (79%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE LRKLFIGGL + T DDSL+ FE+WG + D VVM+DP TKRSRGFGF+TYS + V
Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89
Query: 99 DEAMSNRPHEIDGRVVE 115
D AM RPH++DGRVVE
Sbjct: 90 DAAMCARPHKVDGRVVE 106
>gi|359320431|ref|XP_532379.3| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2 isoform 1 [Canis lupus familiaris]
Length = 328
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 99/161 (61%), Gaps = 13/161 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ +SL+ +F ++GEI +V+++P TKRSRGFGF+T+++ VD+ +
Sbjct: 22 KMFIGGLSWQTSPESLRDYFSKFGEIXKCLVLRNPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 141
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
+ +K T RGF F+ F++ DVV+K+ ++ E++ +++
Sbjct: 142 MFDKTTNRHRGFGFVTFENEDVVEKVC--EIHFHEINNKMV 180
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|322711386|gb|EFZ02959.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium
anisopliae ARSEF 23]
Length = 517
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 98/161 (60%), Gaps = 11/161 (6%)
Query: 18 AGTVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMK 77
G+ P ++KA S + L K+FIGGL++ T D SL+ +FEQ+GE+V+ VM+
Sbjct: 89 PGSSTPPYGTVHKA---SAKDDGTMLLKMFIGGLNWETTDQSLREYFEQFGEVVECTVMR 145
Query: 78 DPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVK-------VRRVT 130
D T RSRGFGF+T+ ++K V+ M + H +DG++++ KRA+PR+ + V V+
Sbjct: 146 DSTTGRSRGFGFLTFKDAKTVNIVMV-KEHFLDGKIIDPKRAIPRDEQEKTSKIFVGGVS 204
Query: 131 KVQIALEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFD 171
+ E DYF Q+G + ++ +K+TG RGF F+ F+
Sbjct: 205 QETTDQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFE 245
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D + +F Q+G +VD +M D T R RGFGF+T+ ES+
Sbjct: 191 EQEKTSKIFVGGVSQETTDQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTF-ESEAG 249
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
EA N P EI G+ VE KRA PR
Sbjct: 250 VEACINVPLEIHGKPVEVKRAQPR 273
>gi|25147054|ref|NP_741785.1| Protein H28G03.1, isoform b [Caenorhabditis elegans]
gi|351064183|emb|CCD72472.1| Protein H28G03.1, isoform b [Caenorhabditis elegans]
Length = 315
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 26/171 (15%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
M Q P LRKLFIGGL + T D+ L +F QWG +VD +V++DP TK SRGFGF+
Sbjct: 36 GMGQYQHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFV 95
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK-----------------VQ 133
T++ + AM++RPH++ G+ V++KRA+PRE + +
Sbjct: 96 TFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGIT 155
Query: 134 IALEQMD----YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+ +D YF +GT++ V ++ G RG F+ ++D + D+ +
Sbjct: 156 NGVHSVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCL 201
>gi|25513662|pir||F89530 protein H28G03.1 [imported] - Caenorhabditis elegans
Length = 336
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 26/166 (15%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
Q P LRKLFIGGL + T D+ L +F QWG +VD +V++DP TK SRGFGF+T++
Sbjct: 62 QHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASI 121
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK-----------------VQIALEQ 138
+ AM++RPH++ G+ V++KRA+PRE + + +
Sbjct: 122 FSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHS 181
Query: 139 MD----YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+D YF +GT++ V ++ G RG F+ ++D + D+ +
Sbjct: 182 VDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCL 222
>gi|25147057|ref|NP_741784.1| Protein H28G03.1, isoform c [Caenorhabditis elegans]
gi|351064184|emb|CCD72473.1| Protein H28G03.1, isoform c [Caenorhabditis elegans]
Length = 335
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 26/171 (15%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
M Q P LRKLFIGGL + T D+ L +F QWG +VD +V++DP TK SRGFGF+
Sbjct: 56 GMGQYQHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFV 115
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK-----------------VQ 133
T++ + AM++RPH++ G+ V++KRA+PRE + +
Sbjct: 116 TFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGIT 175
Query: 134 IALEQMD----YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+ +D YF +GT++ V ++ G RG F+ ++D + D+ +
Sbjct: 176 NGVHSVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCL 221
>gi|451993278|gb|EMD85752.1| hypothetical protein COCHEDRAFT_113051, partial [Cochliobolus
heterostrophus C5]
Length = 168
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 94/150 (62%), Gaps = 10/150 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T +DSLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M +
Sbjct: 1 MFIGGLNWETTEDSLKGYFSQFGEVSECTVMRDSATGRSRGFGFLTFKDPKCVNIVMV-K 59
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PRE + R +K+ Q A E+ ++F Q+G + ++ +K
Sbjct: 60 EHYLDGKIIDPKRAIPREEQ-ERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
ETG RGF F+ FD VD + + +L
Sbjct: 119 ETGRPRGFGFVTFDGDAAVDATLRGPLQIL 148
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ ++ FF+Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQERTSKIFVGGVSQEATEEDFTNFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D + P +I G+ +E KRA PR
Sbjct: 138 DATLRG-PLQILGKQIEVKRAQPR 160
>gi|241953399|ref|XP_002419421.1| cleavage and polyadenylation factor CF I component, putative;
nuclear polyadenylated RNA-binding protein, putative
[Candida dubliniensis CD36]
gi|223642761|emb|CAX43015.1| cleavage and polyadenylation factor CF I component, putative
[Candida dubliniensis CD36]
Length = 505
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 98/153 (64%), Gaps = 10/153 (6%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
RK FIGGL + T +++L + F+++G IVD +MKD T RSRGFGF+T+ ++K VD +
Sbjct: 186 RKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALLK 245
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTKV-------QIALEQMD-YFGQYGTIESVNMVT 155
+R H +DG++++ KRA+ +E + +V K+ + E+ D +F Q+G I ++
Sbjct: 246 DR-HVLDGKLIDPKRAISKEDQ-EKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMI 303
Query: 156 NKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+K+TG RGF F+ +D VDK+ ++K + L+
Sbjct: 304 DKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLK 336
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E + K+F+GG+D ++ FF Q+G+I+D +M D T RSRGFGF+TY VD+
Sbjct: 267 EKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDK 326
Query: 101 AMSNRPHEIDGRVVETKRAVPR 122
N+ + G+ +E KRA PR
Sbjct: 327 VCVNKYLTLKGKAMEVKRAAPR 348
>gi|68465675|ref|XP_723199.1| likely RNA binding protein [Candida albicans SC5314]
gi|68465968|ref|XP_723052.1| likely RNA binding protein [Candida albicans SC5314]
gi|46445066|gb|EAL04337.1| likely RNA binding protein [Candida albicans SC5314]
gi|46445222|gb|EAL04492.1| likely RNA binding protein [Candida albicans SC5314]
Length = 475
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 98/153 (64%), Gaps = 10/153 (6%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
RK FIGGL + T +++L + F+++G IVD +MKD T RSRGFGF+T+ ++K VD +
Sbjct: 162 RKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALLK 221
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTKV-------QIALEQMD-YFGQYGTIESVNMVT 155
+R H +DG++++ KRA+ +E + +V K+ + E+ D +F Q+G I ++
Sbjct: 222 DR-HVLDGKLIDPKRAISKEDQ-EKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMI 279
Query: 156 NKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+K+TG RGF F+ +D VDK+ ++K + L+
Sbjct: 280 DKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLK 312
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E + K+F+GG+D ++ FF Q+G+I+D +M D T RSRGFGF+TY VD+
Sbjct: 243 EKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDK 302
Query: 101 AMSNRPHEIDGRVVETKRAVPR 122
N+ + G+ +E KRA PR
Sbjct: 303 VCVNKYLTLKGKAMEVKRAAPR 324
>gi|238880917|gb|EEQ44555.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 475
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 98/153 (64%), Gaps = 10/153 (6%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
RK FIGGL + T +++L + F+++G IVD +MKD T RSRGFGF+T+ ++K VD +
Sbjct: 162 RKCFIGGLSWDTTEEALVSHFQKYGNIVDYTIMKDSATGRSRGFGFLTFEDAKSVDALLK 221
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTKV-------QIALEQMD-YFGQYGTIESVNMVT 155
+R H +DG++++ KRA+ +E + +V K+ + E+ D +F Q+G I ++
Sbjct: 222 DR-HVLDGKLIDPKRAISKEDQ-EKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMI 279
Query: 156 NKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+K+TG RGF F+ +D VDK+ ++K + L+
Sbjct: 280 DKDTGRSRGFGFVTYDSPAAVDKVCVNKYLTLK 312
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E + K+F+GG+D ++ FF Q+G+I+D +M D T RSRGFGF+TY VD+
Sbjct: 243 EKVGKIFVGGIDPMVTEEEFDNFFSQFGKIIDCQLMIDKDTGRSRGFGFVTYDSPAAVDK 302
Query: 101 AMSNRPHEIDGRVVETKRAVPR 122
N+ + G+ +E KRA PR
Sbjct: 303 VCVNKYLTLKGKAMEVKRAAPR 324
>gi|25147051|ref|NP_741783.1| Protein H28G03.1, isoform a [Caenorhabditis elegans]
gi|351064182|emb|CCD72471.1| Protein H28G03.1, isoform a [Caenorhabditis elegans]
Length = 336
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 92/171 (53%), Gaps = 26/171 (15%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
M Q P LRKLFIGGL + T D+ L +F QWG +VD +V++DP TK SRGFGF+
Sbjct: 57 GMGQYQHDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFV 116
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK-----------------VQ 133
T++ + AM++RPH++ G+ V++KRA+PRE + +
Sbjct: 117 TFASIFSAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGIT 176
Query: 134 IALEQMD----YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+ +D YF +GT++ V ++ G RG F+ ++D + D+ +
Sbjct: 177 NGVHSVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCL 222
>gi|268579353|ref|XP_002644659.1| Hypothetical protein CBG14639 [Caenorhabditis briggsae]
Length = 333
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 91/171 (53%), Gaps = 26/171 (15%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
M Q P LRKLFIGGL + T D+ L +F QWG +VD +V++DP TK SRGFGF+
Sbjct: 57 GMGHYQHDSPPQLRKLFIGGLSHETTDEQLGNYFSQWGHVVDAIVIRDPNTKTSRGFGFV 116
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK-----------------VQ 133
T+ + AM++RPH++ G+ V++KRA+PRE + +
Sbjct: 117 TFHSIFSAEAAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPSPGCKLLLSGIT 176
Query: 134 IALEQMD----YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+ +D YF +GT++ V ++ G RG F+ ++D + D+ +
Sbjct: 177 SGVHSVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCL 222
>gi|240279923|gb|EER43428.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H143]
Length = 548
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 97/160 (60%), Gaps = 10/160 (6%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
+C ++ K+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ +
Sbjct: 146 ECISDDAPDKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDP 205
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGT 147
K V+ M + H +DG++++ KRA+PR+ + R +K+ Q A EQ +F Q+G
Sbjct: 206 KTVNTVMV-KEHYLDGKIIDPKRAIPRDEQ-ERTSKIFVGGVSQEATEQDFKQFFMQFGR 263
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+ ++ +K++G RGF F+ FD V+ + + +L
Sbjct: 264 VVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEIL 303
>gi|150866885|ref|XP_001386627.2| hypothetical protein PICST_68431 [Scheffersomyces stipitis CBS
6054]
gi|149388141|gb|ABN68598.2| nuclear polyadenylated RNA-binding protein 4 [Scheffersomyces
stipitis CBS 6054]
Length = 481
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 97/151 (64%), Gaps = 10/151 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T ++ L ++F ++GE+VD +MKD T +SRGFGF+T+ + K VDE +
Sbjct: 161 KMFIGGLNWDTTEEGLVSYFSKFGEVVDYTIMKDNNTGKSRGFGFLTFRDPKSVDEVIKT 220
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+ RE + +V K+ + E D+F Q+G+I ++ +
Sbjct: 221 D-HILDGKLIDPKRAIAREEQ-DKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMID 278
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
K++G RGF FI FD D VD++ ++K + L
Sbjct: 279 KDSGRSRGFGFITFDSPDAVDRVTVNKFLTL 309
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+D N+ FF Q+G I+D +M D + RSRGFGFIT+ VD N
Sbjct: 245 KIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDSGRSRGFGFITFDSPDAVDRVTVN 304
Query: 105 RPHEIDGRVVETKRAVPR 122
+ + G+ +E KRA PR
Sbjct: 305 KFLTLKGKAMEVKRAEPR 322
>gi|448522704|ref|XP_003868757.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis Co 90-125]
gi|380353097|emb|CCG25853.1| hypothetical protein CORT_0C04790 [Candida orthopsilosis]
Length = 488
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 96/152 (63%), Gaps = 10/152 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T ++ L +F ++GEI D +MKD T RSRGFGF+T+ + VD +
Sbjct: 172 KMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVDVVIKQ 231
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQI-ALEQM-------DYFGQYGTIESVNMVTN 156
H +DG++++ KRA+ RE + RV K+ I ++ M D+F ++GTI ++ +
Sbjct: 232 D-HILDGKLIDPKRAISREDQ-DRVGKIFIGGIDPMVSENEFNDFFSKFGTIIDCQLMID 289
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
K+TG RGF FI FD D VD++ ++K + L+
Sbjct: 290 KDTGRSRGFGFITFDSPDAVDRVCVNKFLTLK 321
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGG+D +++ FF ++G I+D +M D T RSRGFGFIT+ VD N
Sbjct: 256 KIFIGGIDPMVSENEFNDFFSKFGTIIDCQLMIDKDTGRSRGFGFITFDSPDAVDRVCVN 315
Query: 105 RPHEIDGRVVETKRAVPR 122
+ + G+ +E KRA PR
Sbjct: 316 KFLTLKGKAMEVKRAAPR 333
>gi|116197887|ref|XP_001224755.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
gi|88178378|gb|EAQ85846.1| hypothetical protein CHGG_07099 [Chaetomium globosum CBS 148.51]
Length = 886
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 97/161 (60%), Gaps = 11/161 (6%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E+ RK+FIGGL++ T D SL+ +F Q+GE+++ VM+D T RSRGFGF+T+ + K V+
Sbjct: 386 ENTRKMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDGATGRSRGFGFLTFKDPKTVNI 445
Query: 101 AMSNRPHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNM 153
M + H +DG++++ KRA+PR+ + V V++ E +YF Q+G + +
Sbjct: 446 VMV-KEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATL 504
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
+ +K+TG RGF F+ F+ VD + LE+ + I
Sbjct: 505 MMDKDTGRPRGFGFVTFESEAGVDACL---ATPLEIHGKPI 542
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 468 EQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 527
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D ++ P EI G+ +E K+A PR
Sbjct: 528 DACLAT-PLEIHGKPIEVKKAQPR 550
>gi|403283529|ref|XP_003933171.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Saimiri boliviensis boliviensis]
Length = 254
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 80/121 (66%), Gaps = 13/121 (10%)
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR---RVTKV 132
M+DP TKRSRGFGFI Y+ ++ VD AM+ RPH++ GRVVE KRAV RE R +T
Sbjct: 1 MRDPNTKRSRGFGFIRYATAEEVDAAMNARPHKVHGRVVEPKRAVSREDSQRPGAHLTVK 60
Query: 133 QIALEQM----------DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD 182
+I L + DYF QYG IE + ++T++ +G KRGFAF+ FDD+D VD IV+
Sbjct: 61 KIFLGGIKEDTEEHHLRDYFEQYGKIEVIEIITDRGSGKKRGFAFVAFDDHDSVDMIVIQ 120
Query: 183 K 183
K
Sbjct: 121 K 121
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+F+GG+ T + L+ +FEQ+G+I +
Sbjct: 33 KVHGRVVEPKRAVSR--EDSQRPGAHLTVKKIFLGGIKEDTEEHHLRDYFEQYGKIEVIE 90
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
++ D + + RGF F+ + + VD + + H ++G E ++A+ ++
Sbjct: 91 IITDRGSGKKRGFAFVAFDDHDSVDMIVIQKYHTVNGHNCEVRKALSKQ 139
>gi|385303294|gb|EIF47378.1| subunit of cleavage factor i, partial [Dekkera bruxellensis
AWRI1499]
Length = 298
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 98/164 (59%), Gaps = 8/164 (4%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL + T+++SL +F Q+GE+ ++ +M+D T RSRGF F+T+ +SK VDE + +
Sbjct: 1 MFIGGLTWETDEESLGKYFGQFGEVTELHIMRDTATGRSRGFAFLTFKDSKSVDEVLKQK 60
Query: 106 PHEIDGRVVETKRAVPREV--KVRRVTKVQIAL-----EQMDYFGQYGTIESVNMVTNKE 158
H +DG++++ KRA+PRE K ++ IA E DYF Q+G I ++ +K+
Sbjct: 61 -HVLDGKLIDPKRAIPREEQDKTGKIFVGGIAPDVTHQEFTDYFKQFGDIIDSQLMLDKD 119
Query: 159 TGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGEDHRTH 202
TG RG+ F+ +D D V ++ +K V+ Q I + R
Sbjct: 120 TGKSRGYGFVTYDSADAVARVTRNKYVMFHGRQMEIKKAEPRNQ 163
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ +F+Q+G+I+D +M D T +SRG+GF+TY + V N
Sbjct: 84 KIFVGGIAPDVTHQEFTDYFKQFGDIIDSQLMLDKDTGKSRGYGFVTYDSADAVARVTRN 143
Query: 105 RPHEIDGRVVETKRAVPR 122
+ GR +E K+A PR
Sbjct: 144 KYVMFHGRQMEIKKAEPR 161
>gi|432877067|ref|XP_004073090.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 282
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 86/143 (60%), Gaps = 14/143 (9%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL TNDD L+ FEQ+G ++D V+ +RSR FGF+TY + D AM+
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTYLTPEEADAAMAA 66
Query: 105 RPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGTIESV 151
PH ++G VE KRAVP++ KV+++ K I + + DYF QYG +E+
Sbjct: 67 SPHTVEGNWVEVKRAVPKKQADESEARAKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENS 126
Query: 152 NMVTNKETGAKRGFAFIEF-DDY 173
+++ K TG KRGF F+ F DDY
Sbjct: 127 EIMSEKTTGKKRGFGFVHFTDDY 149
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 28 INKAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ +A+ Q E E+ ++K+F+GGL +D L +F Q+GE+ + +M + T +
Sbjct: 78 VKRAVPKKQADESEARAKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENSEIMSEKTTGKK 137
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGFGF+ +++ D A++ H ++G VE K++VP++
Sbjct: 138 RGFGFVHFTDDYAADMAVAVPFHTVNGHRVEVKKSVPKQ 176
>gi|407928279|gb|EKG21140.1| hypothetical protein MPH_01533 [Macrophomina phaseolina MS6]
Length = 571
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 91/151 (60%), Gaps = 10/151 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 103 KMFIGGLNWETTDQSLRDYFSQFGEVAECTVMRDGATGRSRGFGFLTFRDPKTVNIVMVK 162
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+PRE + + K+ Q A EQ +F Q+G + ++ +
Sbjct: 163 E-HYLDGKIIDPKRAIPREEQ-EKTAKIFVGGVSQEATEQDFKSFFEQFGRVIDATLMMD 220
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
K+TG RGF F+ FD VD + + +L
Sbjct: 221 KDTGRPRGFGFVTFDGEAAVDACLQGPLAIL 251
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K+FFEQ+G ++D +M D T R RGFGF+T+ V
Sbjct: 181 EQEKTAKIFVGGVSQEATEQDFKSFFEQFGRVIDATLMMDKDTGRPRGFGFVTFDGEAAV 240
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D + P I G+ +E KRA PR
Sbjct: 241 DACLQG-PLAILGKPIEVKRAQPR 263
>gi|363748813|ref|XP_003644624.1| hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888257|gb|AET37807.1| Hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
Length = 541
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 98/151 (64%), Gaps = 10/151 (6%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
+ K+FIGGL++ T +D+L+ +F ++G + +V +M+D T RSRGFGF++++++ VDE +
Sbjct: 170 INKMFIGGLNWETTEDNLREYFSKYGTVTEVKIMRDGTTGRSRGFGFLSFADASSVDEVV 229
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMV 154
+ H +DG+V++ KRA+PRE + + K+ + E ++F ++G+I ++
Sbjct: 230 KTQ-HILDGKVIDPKRAIPREEQ-DKTGKIFVGGIGPDVRPKEFEEFFSEWGSIIDAQLM 287
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
+K+TG RGF FI +D D VD++ +K +
Sbjct: 288 LDKDTGRSRGFGFITYDSPDAVDRVCQNKFI 318
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF +WG I+D +M D T RSRGFGFITY VD N
Sbjct: 256 KIFVGGIGPDVRPKEFEEFFSEWGSIIDAQLMLDKDTGRSRGFGFITYDSPDAVDRVCQN 315
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVT 130
+ E G+ +E KRA PR+V+ +R T
Sbjct: 316 KFIEFKGKRIEIKRAEPRQVQKQRTT 341
>gi|452981460|gb|EME81220.1| hypothetical protein MYCFIDRAFT_211785, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 353
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 99/172 (57%), Gaps = 8/172 (4%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D+SLK +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 104 KMFIGGLNWETTDESLKQYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKNVNTVMVK 163
Query: 105 RPHEIDGRVVETKRAVPREVKVRR-------VTKVQIALEQMDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + R V++ + D+F ++G + ++ +K
Sbjct: 164 E-HSLDGKLIDPKRAIPRDEQERTAKIFVGGVSQEATEADFKDFFMKFGRVLDATLMMDK 222
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGEDHRTHGTHQEAK 209
+TG RGF F+ FD V++ + + +L EV + G + K
Sbjct: 223 DTGRPRGFGFVTFDSELAVERTLEGPLAILGKPIEVKRAQPRGKMGEEEAPK 274
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K FF ++G ++D +M D T R RGFGF+T+ V
Sbjct: 182 EQERTAKIFVGGVSQEATEADFKDFFMKFGRVLDATLMMDKDTGRPRGFGFVTFDSELAV 241
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ + P I G+ +E KRA PR
Sbjct: 242 ERTLEG-PLAILGKPIEVKRAQPR 264
>gi|449477049|ref|XP_002196403.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Taeniopygia
guttata]
Length = 330
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 90/145 (62%), Gaps = 11/145 (7%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD+ ++
Sbjct: 1 MFIGGLSWQTTQEGLREYFSQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYGTIESVNMV 154
HE+D + ++ K A PR + + VT+ V +E + YF Q+G ++ ++
Sbjct: 61 RHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLM 120
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
+K T RGF F+ F+ D+V+K+
Sbjct: 121 FDKTTNRHRGFGFVTFESEDIVEKV 145
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 88 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 147
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVT---KVQIALEQMDYFG------QYGTIESVNMV 154
HEI+ ++VE K+A P+EV + + ++ MD F Y ++
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYA 207
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+ TG G+ + +F ++ V++ L VL
Sbjct: 208 SRSYTGIAPGYTY-QFPEFR-VERTPLPSAPVLP 239
>gi|296416057|ref|XP_002837697.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633580|emb|CAZ81888.1| unnamed protein product [Tuber melanosporum]
Length = 691
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 105/196 (53%), Gaps = 24/196 (12%)
Query: 14 GLEVAGTVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDV 73
G+ AG P A ED K+FIGGL++ T D+SLK +F Q+GE+V+
Sbjct: 147 GMGAAGYGDPQATGSPAIKEDG---------KMFIGGLNWETTDESLKEYFSQYGEVVEC 197
Query: 74 VVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVK-------V 126
VM+D T RSRGFGF+T+ + K V+ M H +DG++++ KRA+PR+ + V
Sbjct: 198 TVMRDGPTGRSRGFGFLTFKDPKTVNIVMVKE-HYLDGKIIDPKRAIPRDEQEKTSKIFV 256
Query: 127 RRVTKVQIALEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDK-------I 179
V++ + +YF Q+G + ++ +K+TG RGF F+ FD V+
Sbjct: 257 GGVSQEATETDFREYFTQFGRVLDATLMMDKDTGRPRGFGFVTFDSEGAVENALNCPTLA 316
Query: 180 VLDKVVVLEVDQEVIN 195
+LDK + ++ Q N
Sbjct: 317 ILDKPIEVKKAQPRGN 332
>gi|432877083|ref|XP_004073098.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Oryzias
latipes]
Length = 347
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 86/143 (60%), Gaps = 14/143 (9%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL TNDD L+ FEQ+G ++D V+ +RSR FGF+TY + + AM+
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTYLTPEEANAAMAA 66
Query: 105 RPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGTIESV 151
PH ++G VE KRAVP++ KV+++ K I + + DYF QYG +E+
Sbjct: 67 SPHTVEGNWVEVKRAVPKKQADESEARAKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENS 126
Query: 152 NMVTNKETGAKRGFAFIEF-DDY 173
+++ K TG KRGF F+ F DDY
Sbjct: 127 EIISEKTTGKKRGFGFVHFTDDY 149
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL TNDD L+ FEQ+G ++D V+ +RSR FGF+TY + + AM+
Sbjct: 197 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTYLTPEEANAAMAA 256
Query: 105 RPHEIDGRVVETKRAVPRE 123
PH ++G VE KRAVP++
Sbjct: 257 SPHTVEGNWVEVKRAVPKK 275
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 86/167 (51%), Gaps = 24/167 (14%)
Query: 28 INKAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ +A+ Q E E+ ++K+F+GGL +D L +F Q+GE+ + ++ + T +
Sbjct: 78 VKRAVPKKQADESEARAKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENSEIISEKTTGKK 137
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPR-EVKVRRVT------------K 131
RGFGF+ +++ D A++ H ++G VE K+AVP+ E++++ T K
Sbjct: 138 RGFGFVHFTDDYAADMAVAVPFHIVNGHRVEVKKAVPKQEMQIKPNTSYDLPKMFNQACK 197
Query: 132 VQIALEQMD--------YFGQYGTIESVNMVTNKETGAKRGFAFIEF 170
+ + ++D +F Q+GT+ +V +K R F F+ +
Sbjct: 198 LFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTY 244
>gi|410949991|ref|XP_003981699.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Felis
catus]
Length = 472
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 93/172 (54%), Gaps = 25/172 (14%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
+S SE E +KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ +
Sbjct: 66 ESMPSEQEERKKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFK 125
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA- 135
+ V +++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 126 DPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGG 185
Query: 136 -------LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 186 IPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 237
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 180 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 239
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 240 HFHDIMGKKVEVKRAEPRDSK 260
>gi|365982363|ref|XP_003668015.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
gi|343766781|emb|CCD22772.1| hypothetical protein NDAI_0A06170 [Naumovozyma dairenensis CBS 421]
Length = 552
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 97/155 (62%), Gaps = 10/155 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLFIGGL++ T ++ LK +F ++G +VD+ +MKD + RSRGFGF+++ VDE + +
Sbjct: 230 KLFIGGLNWETTEEKLKDYFSKYGNVVDLKIMKDANSGRSRGFGFLSFEHPSSVDEVVKS 289
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQI--------ALEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PRE + + K+ + E ++F Q+GTI ++ +
Sbjct: 290 Q-HILDGKVIDPKRAIPREEQ-DKTGKIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLD 347
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
K+TG RGF FI +D + VD++ +K + + Q
Sbjct: 348 KDTGRSRGFGFITYDSGEAVDRVCQNKYIQFKDKQ 382
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T RSRGFGFITY + VD N
Sbjct: 314 KIFVGGIGPDVRPKEFEEFFAQWGTIIDAQLMLDKDTGRSRGFGFITYDSGEAVDRVCQN 373
Query: 105 RPHEIDGRVVETKRAVPR 122
+ + + +E KRA PR
Sbjct: 374 KYIQFKDKQIEIKRAAPR 391
>gi|353230165|emb|CCD76336.1| rna-binding protein musashi-related [Schistosoma mansoni]
Length = 346
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 91/148 (61%), Gaps = 13/148 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL T + L+ +F+++GE+ + ++M+DP+TKRSRGFGFIT+S+ V++ +
Sbjct: 79 KMFIGGLSPTTTSEGLRDYFQKYGELREYMIMRDPLTKRSRGFGFITFSDPVCVEKVLET 138
Query: 105 RPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGTIESV 151
PH +D + ++ K AVPR+ K +RV Q E++ +YF Q+G +ES
Sbjct: 139 APHILDYKKIDPKLAVPRKSGQNTKVSTKTKRVFIGGVATQTTNEELSEYFSQFGKLESC 198
Query: 152 NMVTNKETGAKRGFAFIEFDDYDVVDKI 179
++ +K T RGF F+ F+ + +K+
Sbjct: 199 ELMMDKSTNRHRGFGFVTFESEESAEKV 226
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+++FIGG+ +T ++ L +F Q+G++ +M D T R RGFGF+T+ + ++
Sbjct: 169 KRVFIGGVATQTTNEELSEYFSQFGKLESCELMMDKSTNRHRGFGFVTFESEESAEKVCE 228
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H++ ++VE K+AVP+EV
Sbjct: 229 IHFHDLHNKMVEAKKAVPKEV 249
>gi|302422014|ref|XP_003008837.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
gi|261351983|gb|EEY14411.1| nuclear polyadenylated RNA-binding protein [Verticillium albo-atrum
VaMs.102]
Length = 473
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 89/140 (63%), Gaps = 8/140 (5%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ ++K V+ M
Sbjct: 48 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVK 107
Query: 105 RPHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + V V++ E DYF Q+G + ++ +K
Sbjct: 108 E-HFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDK 166
Query: 158 ETGAKRGFAFIEFDDYDVVD 177
+TG RGF F+ F+ + VD
Sbjct: 167 DTGRPRGFGFVTFESEEGVD 186
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D K +F Q+G +VD +M D T R RGFGF+T+ + V
Sbjct: 126 EQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEEGV 185
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D + EI G+ +E K+A PR
Sbjct: 186 DACLKTH-LEIHGKPIEVKKAQPR 208
>gi|345311474|ref|XP_001513207.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ornithorhynchus anatinus]
Length = 480
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 95/153 (62%), Gaps = 11/153 (7%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
+PE LRK+F+GGL + T+ LK +F ++GE+VD + DP T RSRGFGFI + E+ V
Sbjct: 208 QPE-LRKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKEAASV 266
Query: 99 DEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ--MDYFGQYGTIES 150
D+ + + H +DGRV++ K+A+ +K V K+ + A E DYFG++G IE+
Sbjct: 267 DKVLDQKEHRLDGRVIDPKKAM--AMKKDPVKKIFVGGLNPEATEDKIRDYFGEFGEIEA 324
Query: 151 VNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+ + + +T +RGF FI F + + V KI+ K
Sbjct: 325 IELPMDPKTNKRRGFVFITFKEEEPVKKILEKK 357
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 51/84 (60%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ ++K+F+GGL+ +D ++ +F ++GEI + + DP T + RGF FIT+ E + V +
Sbjct: 293 DPVKKIFVGGLNPEATEDKIRDYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKK 352
Query: 101 AMSNRPHEIDGRVVETKRAVPREV 124
+ + H + G E K A P+EV
Sbjct: 353 ILEKKFHNVSGSKCEIKVAQPKEV 376
>gi|432961306|ref|XP_004086601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 88/149 (59%), Gaps = 13/149 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL TNDD L+ FEQ+G ++D V+ +RSR FGF+TY + + AM+
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTYLTPEEANAAMAA 66
Query: 105 RPHEIDGRVVETKRAVPREV--------KVRRV----TKVQIALEQM-DYFGQYGTIESV 151
PH ++G VE KRAVP++ KV+++ K I + + DYF Q+G +E+
Sbjct: 67 SPHTVEGNWVEVKRAVPKKQTDESEARDKVKKIFVGGLKNDIQEDDLTDYFSQFGEVENS 126
Query: 152 NMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+++ KETG KRGF F+ F D+ D V
Sbjct: 127 EIMSEKETGKKRGFGFVHFTDHYAADMAV 155
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 28 INKAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ +A+ Q E E+ ++K+F+GGL +D L +F Q+GE+ + +M + T +
Sbjct: 78 VKRAVPKKQTDESEARDKVKKIFVGGLKNDIQEDDLTDYFSQFGEVENSEIMSEKETGKK 137
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGFGF+ +++ D A++ H ++G VE K+AVP++
Sbjct: 138 RGFGFVHFTDHYAADMAVAVPFHTVNGHRVEVKKAVPKQ 176
>gi|70989777|ref|XP_749738.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
gi|66847369|gb|EAL87700.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
Af293]
Length = 608
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 92/150 (61%), Gaps = 10/150 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 106 KMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 165
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+PR+ + + +K+ Q A EQ ++F Q+G + ++ +
Sbjct: 166 E-HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMID 223
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVV 186
K+TG RGF F+ FD V+ + + +
Sbjct: 224 KDTGRPRGFGFVTFDSEAAVEAALSRPLAI 253
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 184 EQEKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAV 243
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ A+S RP I G+ +E K+A PR
Sbjct: 244 EAALS-RPLAICGKPIEVKKAQPR 266
>gi|410077429|ref|XP_003956296.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
gi|372462880|emb|CCF57161.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
Length = 479
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 94/155 (60%), Gaps = 10/155 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +++L+ +F ++G + D+ +MKD T RSRGFGF+T+ VDE +
Sbjct: 95 KMFIGGLNWETTEETLRDYFNKYGHVTDLKIMKDSNTGRSRGFGFLTFEHPSSVDEVVKT 154
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KR++PRE + + K+ + E ++F QYG I ++ +
Sbjct: 155 Q-HILDGKVIDPKRSIPREEQ-DKTGKIFVGGIGADVRPKEFEEFFSQYGNIIDAQLMLD 212
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
K+TG RGF F+ +D D VD++ K + + Q
Sbjct: 213 KDTGRSRGFGFVTYDSPDAVDRVCQSKYIEFKGKQ 247
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF Q+G I+D +M D T RSRGFGF+TY VD +
Sbjct: 179 KIFVGGIGADVRPKEFEEFFSQYGNIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDRVCQS 238
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMDYFGQYGTIESVNM-VTNKETGA 161
+ E G+ +E KRA PR ++ GQYG N + ++TGA
Sbjct: 239 KYIEFKGKQIEIKRAQPRHLQK----------------GQYGGANPNNRNIQYQQTGA 280
>gi|54647597|gb|AAH84959.1| Msi1h protein [Xenopus laevis]
Length = 321
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 94/156 (60%), Gaps = 14/156 (8%)
Query: 38 SEPESLR---KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSE 94
S P+S K+FIGGL ++T + L+ +F +G++ + +VM+DP+TKRSRGFGF+T+ +
Sbjct: 11 SPPDSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMD 70
Query: 95 SKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFG 143
VD+ ++ HE+D + ++ K A PR + + VT+ V +E + YF
Sbjct: 71 QAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFE 130
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
Q+G ++ ++ +K T RGF F+ F+ D+V+KI
Sbjct: 131 QFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKI 166
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKICD 168
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 169 IHFHEINNKMVECKKAQPKEV 189
>gi|159129147|gb|EDP54261.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus fumigatus
A1163]
Length = 608
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 92/150 (61%), Gaps = 10/150 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 106 KMFIGGLNWETTDQSLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 165
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+PR+ + + +K+ Q A EQ ++F Q+G + ++ +
Sbjct: 166 E-HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMID 223
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVV 186
K+TG RGF F+ FD V+ + + +
Sbjct: 224 KDTGRPRGFGFVTFDSEAAVEAALSRPLAI 253
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 184 EQEKTSKIFVGGVSQEATEQEFKEFFTQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAV 243
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ A+S RP I G+ +E K+A PR
Sbjct: 244 EAALS-RPLAICGKPIEVKKAQPR 266
>gi|325093053|gb|EGC46363.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
capsulatus H88]
Length = 687
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 96/160 (60%), Gaps = 10/160 (6%)
Query: 36 QCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
+C ++ K+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ +
Sbjct: 146 ECISDDAPDKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDP 205
Query: 96 KMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGT 147
K V+ M H +DG++++ KRA+PR+ + R +K+ Q A EQ +F Q+G
Sbjct: 206 KTVNTVMVKE-HYLDGKIIDPKRAIPRDEQ-ERTSKIFVGGVSQEATEQDFKQFFMQFGR 263
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+ ++ +K++G RGF F+ FD V+ + + +L
Sbjct: 264 VVDATLMIDKDSGRPRGFGFVTFDSEAAVEATLSGPLEIL 303
>gi|322694374|gb|EFY86205.1| heterogeneous nuclear ribonucleoprotein HRP1 [Metarhizium acridum
CQMa 102]
Length = 516
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 87/134 (64%), Gaps = 8/134 (5%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SL+ +FEQ+GE+V+ VM+D T RSRGFGF+T+ ++K V+ M
Sbjct: 109 KMFIGGLNWETTDQSLREYFEQFGEVVECTVMRDSTTGRSRGFGFLTFKDAKTVNIVMVK 168
Query: 105 RPHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + V V++ E DYF Q+G + ++ +K
Sbjct: 169 E-HFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFRDYFAQFGRVVDATLMMDK 227
Query: 158 ETGAKRGFAFIEFD 171
+TG RGF F+ F+
Sbjct: 228 DTGRPRGFGFVTFE 241
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D + +F Q+G +VD +M D T R RGFGF+T+ ES+
Sbjct: 187 EQEKTSKIFVGGVSQETTDQEFRDYFAQFGRVVDATLMMDKDTGRPRGFGFVTF-ESEAG 245
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
EA N P EI G+ VE KRA PR
Sbjct: 246 VEACINVPLEIHGKPVEVKRAQPR 269
>gi|148233348|ref|NP_001084040.1| musashi RNA-binding protein 1 [Xenopus laevis]
gi|214630|gb|AAA49919.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
Length = 347
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 94/156 (60%), Gaps = 14/156 (8%)
Query: 38 SEPESLR---KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSE 94
S P+S K+FIGGL ++T + L+ +F +G++ + +VM+DP+TKRSRGFGF+T+ +
Sbjct: 11 SPPDSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMD 70
Query: 95 SKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFG 143
VD+ ++ HE+D + ++ K A PR + + VT+ V +E + YF
Sbjct: 71 QAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFE 130
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
Q+G ++ ++ +K T RGF F+ F+ D+V+KI
Sbjct: 131 QFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKI 166
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 15/156 (9%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKICD 168
Query: 104 NRPHEIDGRVVETKRAVPREV-----KVRRVTKVQIALEQMDYFG------QYGTIESVN 152
HEI+ ++VE K+A P+EV VR ++V MD F Y ++
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPTGSVRGRSRVMPY--GMDAFMLGIGMLGYPGFQAAT 226
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+ TG G+ + +F ++ V++ L VL
Sbjct: 227 YASRSYTGIAPGYTY-QFPEFR-VERTPLPGAPVLP 260
>gi|259483749|tpe|CBF79395.1| TPA: heterogeneous nuclear ribonucleoprotein HRP1 (AFU_orthologue;
AFUA_2G06090) [Aspergillus nidulans FGSC A4]
Length = 559
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 92/151 (60%), Gaps = 10/151 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 111 KMFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVK 170
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+PR+ + + +K+ Q A EQ +F Q+G + ++ +
Sbjct: 171 E-HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMID 228
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
K+TG RGF F+ FD V+ + + +L
Sbjct: 229 KDTGRPRGFGFVTFDSEAAVEAALSRPLEIL 259
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 189 EQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAV 248
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ A+S RP EI G+ +E K+A PR
Sbjct: 249 EAALS-RPLEILGKTIEVKKAQPR 271
>gi|453084738|gb|EMF12782.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 536
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 94/151 (62%), Gaps = 10/151 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SLK +F Q+GE+++ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 103 KMFIGGLNWETTDQSLKDYFSQFGEVIECTVMRDGATGRSRGFGFLTFRDPKTVNTVMVK 162
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+PR+ + R K+ Q A EQ +F ++G + ++ +
Sbjct: 163 E-HSLDGKLIDPKRAIPRDEQ-ERTAKIFVGGVSQDATEQDFEAFFQKFGRVLDATLMMD 220
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
K+TG RGF F+ FD+ V++ + + +L
Sbjct: 221 KDTGRPRGFGFVTFDNEMAVERTLEGPLAIL 251
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + +AFF+++G ++D +M D T R RGFGF+T+ V
Sbjct: 181 EQERTAKIFVGGVSQDATEQDFEAFFQKFGRVLDATLMMDKDTGRPRGFGFVTFDNEMAV 240
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ + P I G+ +E KRA PR
Sbjct: 241 ERTLEG-PLAILGKPIEVKRAQPR 263
>gi|196010301|ref|XP_002115015.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
gi|190582398|gb|EDV22471.1| hypothetical protein TRIADDRAFT_28865 [Trichoplax adhaerens]
Length = 210
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 90/145 (62%), Gaps = 11/145 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + TN + L+ +FE++GEI + V+M DP+TKRSRGFGF+T++++ V++ + +
Sbjct: 5 KMFIGGLSWMTNTEKLREYFEKYGEITECVIMHDPITKRSRGFGFVTFTDADNVEKVLQS 64
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ------IALEQ-----MDYFGQYGTIESVNM 153
PH++D + ++ K A P++ + + VT+ + IA YF +G IE +
Sbjct: 65 GPHKLDDKNIDAKVAYPKKQRQKLVTRTKKVFVGGIATNTTTEDITKYFETFGQIEDAML 124
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDK 178
+ +K T RGF F+ F+ D DK
Sbjct: 125 MFDKSTQRHRGFGFVIFESEDSADK 149
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T + + +FE +G+I D ++M D T+R RGFGF+ + D+A
Sbjct: 93 KKVFVGGIATNTTTEDITKYFETFGQIEDAMLMFDKSTQRHRGFGFVIFESEDSADKACE 152
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ + VE K+A P+EV
Sbjct: 153 VHFHEINNKKVEVKKAQPKEV 173
>gi|432899442|ref|XP_004076560.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 3
[Oryzias latipes]
Length = 328
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 97/160 (60%), Gaps = 15/160 (9%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
++ DSQ K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+
Sbjct: 12 SLNDSQ----HDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFV 67
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQM 139
T++++ VD+ ++ + H + + ++ K A PR + + VT+ + + +
Sbjct: 68 TFTDAASVDKVLAQQKHSVLIKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVK 127
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
YF Q+G ++ ++ +K T RGF FI F+ D+V+K+
Sbjct: 128 QYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKV 167
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGFIT+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|432899440|ref|XP_004076559.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 2
[Oryzias latipes]
Length = 347
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 97/160 (60%), Gaps = 15/160 (9%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
++ DSQ K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+
Sbjct: 12 SLNDSQ----HDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFV 67
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQM 139
T++++ VD+ ++ + H + + ++ K A PR + + VT+ + + +
Sbjct: 68 TFTDAASVDKVLAQQKHSVLIKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVK 127
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
YF Q+G ++ ++ +K T RGF FI F+ D+V+K+
Sbjct: 128 QYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKV 167
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGFIT+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|395833926|ref|XP_003789968.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Otolemur
garnettii]
Length = 341
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 90/145 (62%), Gaps = 11/145 (7%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD+ ++
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYGTIESVNMV 154
HE+D + ++ K A PR + + VT+ V +E + YF Q+G ++ ++
Sbjct: 61 RHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLM 120
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
+K T RGF F+ F+ D+V+K+
Sbjct: 121 FDKTTNRHRGFGFVTFESEDIVEKV 145
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 88 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 147
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVT---KVQIALEQMDYFG------QYGTIESVNMV 154
HEI+ ++VE K+A P+EV + + ++ MD F Y ++
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYA 207
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+ TG G+ + +F ++ V++ L VL
Sbjct: 208 SRSYTGLAPGYTY-QFPEFR-VERTPLPSAPVLP 239
>gi|432899438|ref|XP_004076558.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 1
[Oryzias latipes]
Length = 328
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 97/160 (60%), Gaps = 15/160 (9%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
++ DSQ K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+
Sbjct: 12 SLNDSQ----HDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFV 67
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQM 139
T++++ VD+ ++ + H + + ++ K A PR + + VT+ + + +
Sbjct: 68 TFTDAASVDKVLAQQKHSVLIKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVK 127
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
YF Q+G ++ ++ +K T RGF FI F+ D+V+K+
Sbjct: 128 QYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKV 167
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGFIT+ +V++
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCE 169
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 170 IHFHEINNKMVECKKAQPKEVMFPPGTR 197
>gi|58332792|ref|NP_001011470.1| musashi RNA-binding protein 1 [Xenopus (Silurana) tropicalis]
gi|147899394|ref|NP_001081302.1| nrp-1B [Xenopus laevis]
gi|214632|gb|AAA49920.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
gi|52221204|gb|AAH82667.1| LOC397764 protein [Xenopus laevis]
gi|56970642|gb|AAH88603.1| musashi homolog 1 [Xenopus (Silurana) tropicalis]
Length = 340
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 94/156 (60%), Gaps = 14/156 (8%)
Query: 38 SEPESLR---KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSE 94
S P+S K+FIGGL ++T + L+ +F +G++ + +VM+DP+TKRSRGFGF+T+ +
Sbjct: 11 SPPDSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMD 70
Query: 95 SKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFG 143
VD+ ++ HE+D + ++ K A PR + + VT+ V +E + YF
Sbjct: 71 QAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFE 130
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
Q+G ++ ++ +K T RGF F+ F+ D+V+K+
Sbjct: 131 QFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKV 166
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 15/156 (9%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFEGEDIVEKVCD 168
Query: 104 NRPHEIDGRVVETKRAVPREV-----KVRRVTKVQIALEQMDYFG------QYGTIESVN 152
HEI+ ++VE K+A P+EV VR ++V MD F Y ++
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPTGSVRGRSRVMPY--GMDAFMLGIGMLGYPGFQAAT 226
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+ TG G+ + +F ++ V++ L VL
Sbjct: 227 YASRSYTGIAPGYTY-QFPEFR-VERTPLPGAPVLP 260
>gi|406860631|gb|EKD13688.1| hypothetical protein MBM_07889 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 453
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 94/150 (62%), Gaps = 10/150 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SLK +F Q+GE+++ VM+D + RSRGFGF+T+ +++ V+ M
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + R +K+ Q A EQ +YF Q+G + ++ +K
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQ-ERTSKIFVGGVSQEATEQDFKEYFMQFGRVVDATLMMDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+TG RGF F+ FD VD + + +L
Sbjct: 119 DTGRPRGFGFVTFDSEAAVDACLDSPLEIL 148
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQERTSKIFVGGVSQEATEQDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D + + P EI G+ +E K+A PR
Sbjct: 138 DACL-DSPLEILGKPIEVKKAQPR 160
>gi|334350508|ref|XP_003342364.1| PREDICTED: hypothetical protein LOC100617798 [Monodelphis
domestica]
Length = 675
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 91/159 (57%), Gaps = 13/159 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLF+GGL T + L+++FE +G + D VV+ + T RSR FGFIT+S D AM
Sbjct: 154 LCKLFVGGLSPYTTEIRLRSYFEAFGCLRDCVVVMNAQTNRSRCFGFITFSSLSEADAAM 213
Query: 103 SNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQMD--------YFGQYGTIE 149
+ PHE+DG VE KRAV RE + RV K+ + + D +F Q+G +E
Sbjct: 214 AASPHEVDGSRVELKRAVSREDSCKPGAHARVKKIFVGGIKGDVSESDLVRHFSQFGPVE 273
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
++ NK++G KRGF F+ F D+D DK + K ++
Sbjct: 274 KAEIIVNKQSGKKRGFGFVHFFDHDTADKAAVIKFHPIQ 312
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPESLR--KLFIGGLDYRTNDDSLKAFFEQWGEIVDV 73
EV G+ V L +++ EDS C R K+F+GG+ ++ L F Q+G +
Sbjct: 219 EVDGSRVELKRAVSR--EDS-CKPGAHARVKKIFVGGIKGDVSESDLVRHFSQFGPVEKA 275
Query: 74 VVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
++ + + + RGFGF+ + + D+A + H I G VE K+A+P+E
Sbjct: 276 EIIVNKQSGKKRGFGFVHFFDHDTADKAAVIKFHPIQGHRVEVKKALPKE 325
>gi|403308185|ref|XP_003944552.1| PREDICTED: DAZ-associated protein 1 [Saimiri boliviensis
boliviensis]
Length = 489
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 25/162 (15%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
RKLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V ++
Sbjct: 93 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 152
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA--------LEQ 138
+RPH +DGR ++ K PR ++ R K+ + E
Sbjct: 153 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 212
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 213 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 254
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 197 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 256
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 257 HFHDIMGKKVEVKRAEPRDSK 277
>gi|397515643|ref|XP_003828058.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Pan
paniscus]
Length = 254
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 64/84 (76%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
EPE L KLFIGGL++ T D+SL++ FEQWG + D VVM+DP TK S GFGF+TY+ + V
Sbjct: 9 EPEQLWKLFIGGLNFETTDESLRSHFEQWGTLTDCVVMRDPSTKCSWGFGFVTYAPVEAV 68
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D AM+ RP ++DGR V TKRAV R
Sbjct: 69 DAAMNARPRKVDGRAVGTKRAVSR 92
>gi|440632909|gb|ELR02828.1| hypothetical protein GMDG_05764 [Geomyces destructans 20631-21]
Length = 544
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 90/143 (62%), Gaps = 8/143 (5%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SLK +F Q+GE+V+ VM+D + RSRGFGF+T+ +++ V+ M
Sbjct: 103 KMFIGGLNWETTDQSLKDYFSQFGEVVECTVMRDGASGRSRGFGFLTFKDARTVNVVMVK 162
Query: 105 RPHEIDGRVVETKRAVPREVKVRR-------VTKVQIALEQMDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + R V++ L+ +YF Q+G + ++ +K
Sbjct: 163 E-HYLDGKIIDPKRAIPRDEQERTSKIFVGGVSQEASELDFKEYFMQFGRVVDATLMMDK 221
Query: 158 ETGAKRGFAFIEFDDYDVVDKIV 180
+TG RGF F+ FD VD +
Sbjct: 222 DTGRPRGFGFVTFDSEAAVDACI 244
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ ++ K +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 181 EQERTSKIFVGGVSQEASELDFKEYFMQFGRVVDATLMMDKDTGRPRGFGFVTFDSEAAV 240
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D A N P EI G+ +E K+A PR
Sbjct: 241 D-ACINIPLEILGKPIEVKKAQPR 263
>gi|334326768|ref|XP_001373196.2| PREDICTED: DAZ-associated protein 1-like [Monodelphis domestica]
Length = 452
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 25/166 (15%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P RKLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 52 PPGSRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVG 111
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 112 TVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCG 171
Query: 136 -LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 172 ETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 217
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 160 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 219
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 220 HFHDIMGKKVEVKRAEPRDSK 240
>gi|219521089|gb|AAI72047.1| Hnrnpa1l2 protein [Mus musculus]
gi|219521464|gb|AAI72049.1| Hnrnpa1l2 protein [Mus musculus]
gi|219521466|gb|AAI72057.1| Hnrnpa1l2 protein [Mus musculus]
gi|219521468|gb|AAI72058.1| Hnrnpa1l2 protein [Mus musculus]
Length = 275
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 81/121 (66%), Gaps = 13/121 (10%)
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE--------VKVR 127
M+DP TKRSR FGF+TY+ + VD AM+ RPH++DGRVVE KRAV RE + V+
Sbjct: 1 MRDPNTKRSRCFGFVTYTTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQIPGAHLTVK 60
Query: 128 RVTKVQIALEQ-----MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD 182
++ I + DYF QYG IE + ++T++ +G KRGFAF+ FDD+D VDKIV+
Sbjct: 61 KILVGGIKEDTKEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 120
Query: 183 K 183
K
Sbjct: 121 K 121
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 16 EVAGTVVPLAMIINKAMEDSQCSEPE-SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
+V G VV +++ EDSQ +++K+ +GG+ T + L+ +FEQ+G+I +
Sbjct: 33 KVDGRVVEPKRAVSR--EDSQIPGAHLTVKKILVGGIKEDTKEHHLRDYFEQYGKIEVIE 90
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
+M D + + RGF F+T+ + VD+ + + H ++G E ++A+ ++
Sbjct: 91 IMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 139
>gi|317142960|ref|XP_003189459.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 531
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 92/151 (60%), Gaps = 10/151 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 112 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 171
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+PR+ + + +K+ Q A EQ +F Q+G + ++ +
Sbjct: 172 E-HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMID 229
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
K+TG RGF F+ FD V+ + + +L
Sbjct: 230 KDTGRPRGFGFVTFDSEAAVEAALSRPLEIL 260
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ N+ K FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 190 EQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 249
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ A+S RP EI G+ +E K+A PR
Sbjct: 250 EAALS-RPLEILGKPIEVKKAQPR 272
>gi|317142958|ref|XP_001819217.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus oryzae
RIB40]
Length = 557
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 92/151 (60%), Gaps = 10/151 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 112 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 171
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+PR+ + + +K+ Q A EQ +F Q+G + ++ +
Sbjct: 172 E-HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMID 229
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
K+TG RGF F+ FD V+ + + +L
Sbjct: 230 KDTGRPRGFGFVTFDSEAAVEAALSRPLEIL 260
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ N+ K FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 190 EQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 249
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ A+S RP EI G+ +E K+A PR
Sbjct: 250 EAALS-RPLEILGKPIEVKKAQPR 272
>gi|391863705|gb|EIT73005.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 545
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 92/151 (60%), Gaps = 10/151 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 100 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 159
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+PR+ + + +K+ Q A EQ +F Q+G + ++ +
Sbjct: 160 E-HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMID 217
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
K+TG RGF F+ FD V+ + + +L
Sbjct: 218 KDTGRPRGFGFVTFDSEAAVEAALSRPLEIL 248
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ N+ K FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 178 EQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 237
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ A+S RP EI G+ +E K+A PR
Sbjct: 238 EAALS-RPLEILGKPIEVKKAQPR 260
>gi|226478812|emb|CAX72901.1| RNA-binding protein Musashi homolog 2 [Schistosoma japonicum]
Length = 345
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 91/148 (61%), Gaps = 13/148 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL T + L+ +F+++GE+ + ++M+DP+TKRSRGFGF+T+S+ V++ +
Sbjct: 79 KMFIGGLSPTTTSEVLRDYFQKYGELREYMIMRDPLTKRSRGFGFVTFSDPMCVEKVLEA 138
Query: 105 RPHEIDGRVVETKRAVPRE--------VKVRRV----TKVQIALEQM-DYFGQYGTIESV 151
PH +D + ++ K AVPR+ K +RV Q E++ +YF Q+G +ES
Sbjct: 139 APHILDFKKIDPKLAVPRKSGQNTKISTKTKRVFIGGVATQTTNEELSEYFSQFGKLESC 198
Query: 152 NMVTNKETGAKRGFAFIEFDDYDVVDKI 179
++ +K T RGF F+ F+ + +K+
Sbjct: 199 ELMMDKSTNRHRGFGFVTFESEESAEKV 226
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+++FIGG+ +T ++ L +F Q+G++ +M D T R RGFGF+T+ + ++
Sbjct: 169 KRVFIGGVATQTTNEELSEYFSQFGKLESCELMMDKSTNRHRGFGFVTFESEESAEKVCE 228
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H++ ++VE K+AVP+EV
Sbjct: 229 IHFHDLHNKMVEAKKAVPKEV 249
>gi|361131862|gb|EHL03497.1| putative Uncharacterized RNA-binding protein [Glarea lozoyensis
74030]
Length = 467
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 94/150 (62%), Gaps = 10/150 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D+SLK +F Q+GE+++ VM+D + RSRGFGF+T+ +++ V+ M
Sbjct: 1 MFIGGLNWETTDESLKEYFSQFGEVLECTVMRDGASGRSRGFGFLTFKDARTVNIVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + R +K+ Q A EQ YF Q+G + ++ +K
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQ-ERTSKIFVGGVSQEATEQDFKQYFMQFGRVVDATLMMDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+TG RGF F+ FD V+ + + +L
Sbjct: 119 DTGRPRGFGFVTFDSEAAVEACLEGPLEIL 148
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K +F Q+G +VD +M D T R RGFGF+T+ +S+
Sbjct: 78 EQERTSKIFVGGVSQEATEQDFKQYFMQFGRVVDATLMMDKDTGRPRGFGFVTF-DSEAA 136
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
EA P EI G+ +E K+A PR
Sbjct: 137 VEACLEGPLEILGKPIEVKKAQPR 160
>gi|392863540|gb|EJB10655.1| musashi 1, variant [Coccidioides immitis RS]
Length = 608
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 92/151 (60%), Gaps = 10/151 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 113 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 172
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+PR+ + R +K+ Q A EQ +F Q+G + ++ +
Sbjct: 173 E-HYLDGKIIDPKRAIPRDEQ-ERTSKIFVGGVSQDANEQDFKKFFMQFGRVVDATLMID 230
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
K+TG RGF F+ FD V+ + + +L
Sbjct: 231 KDTGRPRGFGFVTFDSEAAVEACLSQPLEIL 261
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ N+ K FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 191 EQERTSKIFVGGVSQDANEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 250
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ +S +P EI G+ +E K+A PR
Sbjct: 251 EACLS-QPLEILGKPIEVKKAQPR 273
>gi|354480942|ref|XP_003502662.1| PREDICTED: DAZ-associated protein 1-like [Cricetulus griseus]
Length = 495
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 25/162 (15%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
RKLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V ++
Sbjct: 99 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 158
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA--------LEQ 138
+RPH +DGR ++ K PR ++ R K+ + E
Sbjct: 159 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETEL 218
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 219 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 260
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 203 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 262
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 263 HFHDIMGKKVEVKRAEPRDSK 283
>gi|260942727|ref|XP_002615662.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
gi|238850952|gb|EEQ40416.1| hypothetical protein CLUG_04544 [Clavispora lusitaniae ATCC 42720]
Length = 527
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 98/152 (64%), Gaps = 10/152 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T ++ L ++F ++GEI+D +MKD T RSRGFGF+T+ + + VDE +
Sbjct: 164 KMFIGGLNWDTTEEGLVSYFSKYGEILDYTIMKDASTGRSRGFGFLTFKDPRAVDEVIK- 222
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG++++ KRA+ RE + +V K+ + + D+F Q+G I ++ +
Sbjct: 223 KDHILDGKLIDPKRAIAREEQD-KVGKIFVGGIDPLVNERDFNDFFSQFGHIIDAQLMID 281
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
K+TG RGF FI +D + VD++ ++K + L+
Sbjct: 282 KDTGRSRGFGFITYDSPEAVDRVCVNKYLTLK 313
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+D N+ FF Q+G I+D +M D T RSRGFGFITY + VD N
Sbjct: 248 KIFVGGIDPLVNERDFNDFFSQFGHIIDAQLMIDKDTGRSRGFGFITYDSPEAVDRVCVN 307
Query: 105 RPHEIDGRVVETKRAVPR 122
+ + G+ +E KRA PR
Sbjct: 308 KYLTLKGKAMEVKRAEPR 325
>gi|212528804|ref|XP_002144559.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
gi|210073957|gb|EEA28044.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces marneffei
ATCC 18224]
Length = 454
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 92/151 (60%), Gaps = 10/151 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 27 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 86
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+PR+ + + +K+ Q A EQ +F Q+G + ++ +
Sbjct: 87 E-HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMID 144
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
K+TG RGF F+ FD V+ + + +L
Sbjct: 145 KDTGRPRGFGFVTFDSEAAVEATLSRPLEIL 175
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K FF Q+G +VD +M D T R RGFGF+T+ +S+
Sbjct: 105 EQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF-DSEAA 163
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
EA +RP EI G+ +E K+A PR
Sbjct: 164 VEATLSRPLEILGKSIEVKKAQPR 187
>gi|340914891|gb|EGS18232.1| hypothetical protein CTHT_0062490 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 700
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 89/135 (65%), Gaps = 8/135 (5%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+FIGGL++ T D+SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K+V+ M
Sbjct: 225 KKMFIGGLNWETTDESLRNYFSQFGEVVECTVMRDSATGRSRGFGFLTFKDPKVVNIVMV 284
Query: 104 NRPHEIDGRVVETKRAVPR--EVKVRRVTKVQIALEQMD-----YFGQYGTIESVNMVTN 156
+ H +DG++++ KRA+PR + K ++ ++ E D YF Q+G + ++ +
Sbjct: 285 -KEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSPETTDHEFREYFSQFGRVVDATLMMD 343
Query: 157 KETGAKRGFAFIEFD 171
K+TG RGF F+ F+
Sbjct: 344 KDTGRPRGFGFVTFE 358
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D + +F Q+G +VD +M D T R RGFGF+T+ ES+
Sbjct: 304 EQEKTSKIFVGGVSPETTDHEFREYFSQFGRVVDATLMMDKDTGRPRGFGFVTF-ESEAG 362
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
EA N E+ G+ +E K+A PR
Sbjct: 363 VEACLNAKLELHGKPIEVKKAQPR 386
>gi|149241445|ref|XP_001526315.1| hypothetical protein LELG_02873 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450438|gb|EDK44694.1| hypothetical protein LELG_02873 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 548
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 94/152 (61%), Gaps = 10/152 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T ++ L F ++GE+VD +MKD T RSRGFGF+T+ + VD +
Sbjct: 205 KMFIGGLNWDTTEEGLAEHFRKYGEVVDYTIMKDNATGRSRGFGFLTFKDPASVDAVIKE 264
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+ RE + RV K+ + E ++F ++G+I ++ +
Sbjct: 265 E-HILDGKLIDPKRAIAREDQ-DRVGKIFVGGIDPMVTEREFNEFFSKFGSIIDCQLMID 322
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
K+TG RGF FI +D D VDK+ ++K + L+
Sbjct: 323 KDTGRSRGFGFITYDSPDAVDKVCVNKYLTLK 354
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+D + FF ++G I+D +M D T RSRGFGFITY VD+ N
Sbjct: 289 KIFVGGIDPMVTEREFNEFFSKFGSIIDCQLMIDKDTGRSRGFGFITYDSPDAVDKVCVN 348
Query: 105 RPHEIDGRVVETKRAVPR 122
+ + G+ +E KRA PR
Sbjct: 349 KYLTLKGKAMEVKRAAPR 366
>gi|156380774|ref|XP_001631942.1| predicted protein [Nematostella vectensis]
gi|156218991|gb|EDO39879.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 87/145 (60%), Gaps = 11/145 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T + L+ FE++GE+ + VVM+DPVTKRSRGFGF+T+ + K VD +++
Sbjct: 1 KMFIGGLSWQTTAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNS 60
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM-DYFGQYGTIESVNM 153
E+DG+ ++ K AVP+ + VT + + E M YF Q+G I +
Sbjct: 61 GAQELDGKKIDPKLAVPKRAPAKMVTTTKKIFIGGLSTNTSEEDMKKYFSQFGKITETML 120
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDK 178
+ +K T RGF F+ F+ + DK
Sbjct: 121 MFDKATQRHRGFGFVTFESENSADK 145
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 55/83 (66%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+ +K+FIGGL T+++ +K +F Q+G+I + ++M D T+R RGFGF+T+ D+A
Sbjct: 87 TTKKIFIGGLSTNTSEEDMKKYFSQFGKITETMLMFDKATQRHRGFGFVTFESENSADKA 146
Query: 102 MSNRPHEIDGRVVETKRAVPREV 124
+ H I+ + VE K+A P+EV
Sbjct: 147 CDTQYHLINNKKVEVKKAQPKEV 169
>gi|354547999|emb|CCE44734.1| hypothetical protein CPAR2_405380 [Candida parapsilosis]
Length = 513
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 96/152 (63%), Gaps = 10/152 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T ++ L +F ++GEI D +MKD T RSRGFGF+T+ + VD +
Sbjct: 194 KMFIGGLNWDTTEEGLVNYFSKFGEITDYTIMKDNATGRSRGFGFLTFKDPSAVDVVIKQ 253
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQI-ALEQM-------DYFGQYGTIESVNMVTN 156
H +DG++++ KRA+ RE + RV K+ I ++ M ++F ++GTI ++ +
Sbjct: 254 D-HILDGKLIDPKRAISREDQ-DRVGKIFIGGIDPMVSEGEFNEFFSKFGTIIDCQLMID 311
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
K+TG RGF FI FD D VD++ ++K + L+
Sbjct: 312 KDTGRSRGFGFITFDSPDAVDRVCVNKYLTLK 343
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGG+D ++ FF ++G I+D +M D T RSRGFGFIT+ VD N
Sbjct: 278 KIFIGGIDPMVSEGEFNEFFSKFGTIIDCQLMIDKDTGRSRGFGFITFDSPDAVDRVCVN 337
Query: 105 RPHEIDGRVVETKRAVPR 122
+ + G+ +E KRA PR
Sbjct: 338 KYLTLKGKAMEVKRAAPR 355
>gi|345790931|ref|XP_854252.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Canis lupus
familiaris]
Length = 362
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 91/151 (60%), Gaps = 11/151 (7%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P K+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD
Sbjct: 16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVD 75
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYGTI 148
+ ++ HE+D + ++ K A PR + + VT+ V +E + YF Q+ +
Sbjct: 76 KVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFEKV 135
Query: 149 ESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ ++ +K T RGF F+ F+ D+V+K+
Sbjct: 136 DDAMLMFDKTTNRHRGFGFVTFESEDIVEKV 166
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+ ++ D ++M D T R RGFGF+T+ +V++
Sbjct: 109 KKIFVGGLSVNTTVEDVKQYFEQFEKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVT---KVQIALEQMDYFG------QYGTIESVNMV 154
HEI+ ++VE K+A P+EV + + ++ MD F Y ++
Sbjct: 169 IHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYA 228
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+ TG G+ + +F ++ V++ L VL
Sbjct: 229 SRSYTGLAPGYTY-QFPEFR-VERTPLPSAPVLP 260
>gi|258574483|ref|XP_002541423.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
gi|237901689|gb|EEP76090.1| hypothetical protein UREG_00938 [Uncinocarpus reesii 1704]
Length = 341
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 101/175 (57%), Gaps = 19/175 (10%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ ++K V+ M +
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDAKTVNTVMV-K 59
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + R +K+ Q A EQ +F Q+G + ++ +K
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQ-ERTSKIFVGGVSQDATEQDFKKFFMQFGRVVDATLMIDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVL----EVDQEVING-----EDHRTHG 203
+TG RGF F+ FD V+ + + +L EV + G ED R G
Sbjct: 119 DTGRPRGFGFVTFDSEAAVEACLSQPLEILGKPIEVKKAQPRGNMREEEDRRLRG 173
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQERTSKIFVGGVSQDATEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ +S +P EI G+ +E K+A PR
Sbjct: 138 EACLS-QPLEILGKPIEVKKAQPR 160
>gi|294658754|ref|XP_002770838.1| DEHA2F16698p [Debaryomyces hansenii CBS767]
gi|202953359|emb|CAR66359.1| DEHA2F16698p [Debaryomyces hansenii CBS767]
Length = 411
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 98/152 (64%), Gaps = 10/152 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T + L +F ++GE++D +M+D T +SRGFGF+T+ + K VDE +
Sbjct: 87 KMFIGGLNWDTTEQGLVEYFTKYGEVIDHTIMRDNNTGKSRGFGFLTFKDPKSVDEVIKT 146
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQI-ALEQM-------DYFGQYGTIESVNMVTN 156
H +DG++++ KRA+ RE + +V K+ + ++ M D+F Q+G+I ++ +
Sbjct: 147 D-HILDGKLIDPKRAIAREEQD-KVGKIFVGGIDPMVNEKDFNDFFSQFGSIIDAQLMID 204
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
K+TG RGF FI +D D VD++ ++K + L+
Sbjct: 205 KDTGRSRGFGFITYDSPDAVDRVTVNKYLTLK 236
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+D N+ FF Q+G I+D +M D T RSRGFGFITY VD N
Sbjct: 171 KIFVGGIDPMVNEKDFNDFFSQFGSIIDAQLMIDKDTGRSRGFGFITYDSPDAVDRVTVN 230
Query: 105 RPHEIDGRVVETKRAVPR 122
+ + G+ +E KRA PR
Sbjct: 231 KYLTLKGKSMEVKRAEPR 248
>gi|296485420|tpg|DAA27535.1| TPA: DAZ associated protein 1 [Bos taurus]
Length = 444
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 25/164 (15%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+ RKLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 46 APRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 105
Query: 102 MSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA--------L 136
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 106 LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGET 165
Query: 137 EQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 166 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 209
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 152 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 211
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 212 HFHDIMGKKVEVKRAEPRDSK 232
>gi|397466676|ref|XP_003805076.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Pan
paniscus]
Length = 460
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 25/162 (15%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
RKLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V ++
Sbjct: 63 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 122
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA--------LEQ 138
+RPH +DGR ++ K PR ++ R K+ + E
Sbjct: 123 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETEL 182
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 183 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 224
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 167 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 226
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 227 HFHDIMGKKVEVKRAEPRDSKSQ 249
>gi|148237075|ref|NP_001082414.1| heterogeneous nuclear ribonucleoprotein A0 [Xenopus laevis]
gi|27735460|gb|AAH41277.1| LOC398455 protein, partial [Xenopus laevis]
gi|77748282|gb|AAI06306.1| LOC398455 protein [Xenopus laevis]
Length = 308
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 13/154 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLFIGGL+ +T ++ L+ FE +G++ D VV+ +P TKRSR FGF+TYS + D A+
Sbjct: 11 LCKLFIGGLNVQTTEEGLRQHFETYGQLTDCVVVINPQTKRSRCFGFVTYSSAAEADAAV 70
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ-------MDYFGQYGTIE 149
PH +DG VE KRAV RE R ++ L++ +++F Q+G +E
Sbjct: 71 EASPHVVDGNNVELKRAVSREDSARPGAHAKVKKLFVGGLKEEVGESDLLEHFSQFGPVE 130
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
V ++ +K TG KRGF F+ F+ +D DK + K
Sbjct: 131 KVEVIADKLTGKKRGFGFVYFNSHDSADKAAVVK 164
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
++KLF+GGL + L F Q+G + V V+ D +T + RGFGF+ ++ D+A
Sbjct: 102 VKKLFVGGLKEEVGESDLLEHFSQFGPVEKVEVIADKLTGKKRGFGFVYFNSHDSADKAA 161
Query: 103 SNRPHEIDGRVVETKRAVPRE 123
+ H ++G VE K+AVP+E
Sbjct: 162 VVKFHSVNGHRVEVKKAVPKE 182
>gi|119193228|ref|XP_001247220.1| hypothetical protein CIMG_00991 [Coccidioides immitis RS]
Length = 506
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 92/151 (60%), Gaps = 10/151 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 11 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVK 70
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+PR+ + R +K+ Q A EQ +F Q+G + ++ +
Sbjct: 71 E-HYLDGKIIDPKRAIPRDEQ-ERTSKIFVGGVSQDANEQDFKKFFMQFGRVVDATLMID 128
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
K+TG RGF F+ FD V+ + + +L
Sbjct: 129 KDTGRPRGFGFVTFDSEAAVEACLSQPLEIL 159
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ N+ K FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 89 EQERTSKIFVGGVSQDANEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 148
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ +S +P EI G+ +E K+A PR
Sbjct: 149 EACLS-QPLEILGKPIEVKKAQPR 171
>gi|242765445|ref|XP_002340976.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
gi|218724172|gb|EED23589.1| heterogeneous nuclear ribonucleoprotein HRP1 [Talaromyces
stipitatus ATCC 10500]
Length = 544
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 92/151 (60%), Gaps = 10/151 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 113 KMFIGGLNWETTDQSLKDYFSQFGEVSECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 172
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+PR+ + + +K+ Q A EQ +F Q+G + ++ +
Sbjct: 173 E-HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMID 230
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
K+TG RGF F+ FD V+ + + +L
Sbjct: 231 KDTGRPRGFGFVTFDSEAAVEATLSRPLEIL 261
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K FF Q+G +VD +M D T R RGFGF+T+ +S+
Sbjct: 191 EQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTF-DSEAA 249
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
EA +RP EI G+ +E K+A PR
Sbjct: 250 VEATLSRPLEILGKSIEVKKAQPR 273
>gi|49522060|gb|AAH71067.1| LOC398455 protein [Xenopus laevis]
Length = 303
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 92/154 (59%), Gaps = 13/154 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLFIGGL+ +T ++ L+ FE +G++ D VV+ +P TKRSR FGF+TYS + D A+
Sbjct: 6 LCKLFIGGLNVQTTEEGLRQHFETYGQLTDCVVVINPQTKRSRCFGFVTYSSAAEADAAV 65
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ-------MDYFGQYGTIE 149
PH +DG VE KRAV RE R ++ L++ +++F Q+G +E
Sbjct: 66 EASPHVVDGNNVELKRAVSREDSARPGAHAKVKKLFVGGLKEEVGESDLLEHFSQFGPVE 125
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
V ++ +K TG KRGF F+ F+ +D DK + K
Sbjct: 126 KVEVIADKLTGKKRGFGFVYFNSHDSADKAAVVK 159
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
++KLF+GGL + L F Q+G + V V+ D +T + RGFGF+ ++ D+A
Sbjct: 97 VKKLFVGGLKEEVGESDLLEHFSQFGPVEKVEVIADKLTGKKRGFGFVYFNSHDSADKAA 156
Query: 103 SNRPHEIDGRVVETKRAVPRE 123
+ H ++G VE K+AVP+E
Sbjct: 157 VVKFHSVNGHRVEVKKAVPKE 177
>gi|242014750|ref|XP_002428048.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512567|gb|EEB15310.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 371
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 93/156 (59%), Gaps = 10/156 (6%)
Query: 34 DSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYS 93
S ++ + KLF+GGL ++T+ + L+ +F +G I DV++MKDPVT+RSRGFGFIT+
Sbjct: 49 SSPGADSTAAGKLFVGGLSWQTSSEKLRQYFGMFGNITDVLIMKDPVTQRSRGFGFITFE 108
Query: 94 ESKMVDEAMSNRPHEIDGRVVETKRAVP----------REVKVRRVTKVQIALEQMDYFG 143
E V+ + H +DG+ ++ K A P +++ V V++ + E YF
Sbjct: 109 EPSSVENVLKVPVHTLDGKKIDPKHATPKGRGKTNGKTKKIFVGGVSQDTSSDEVKVYFS 168
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
Q+G +E M+ +++T RGF F+ F++ + VD++
Sbjct: 169 QFGKVEEAVMLMDQQTKRHRGFGFVTFENEETVDRV 204
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ T+ D +K +F Q+G++ + V++ D TKR RGFGF+T+ + VD
Sbjct: 147 KKIFVGGVSQDTSSDEVKVYFSQFGKVEEAVMLMDQQTKRHRGFGFVTFENEETVDRVCE 206
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H I + VE K+A+P+EV
Sbjct: 207 IHFHNIKNKKVECKKAMPKEV 227
>gi|255948100|ref|XP_002564817.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591834|emb|CAP98089.1| Pc22g08010 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 456
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 94/150 (62%), Gaps = 10/150 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D+SL+ +F Q+GE+ + VM+D T RSRGFGF+T+ ++K V+ M
Sbjct: 1 MFIGGLNWETTDESLRDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDAKTVNTVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + + +K+ Q A EQ +F Q+G + ++ +K
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMMDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+TG RGF F+ FD V+K + + +L
Sbjct: 119 DTGRPRGFGFVTFDGDAAVEKALSRPLEIL 148
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMMDKDTGRPRGFGFVTFDGDAAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
++A+S RP EI G+ +E K+A PR
Sbjct: 138 EKALS-RPLEILGKPIEVKKAQPR 160
>gi|449474732|ref|XP_004175903.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A0 [Taeniopygia guttata]
Length = 310
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 89/155 (57%), Gaps = 13/155 (8%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+L +FIGG++ ++ L+ F +G + D VV+ +P TKRSR FGF+TYS + D A
Sbjct: 5 ALCXIFIGGINVQSTKAGLREQFAAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEADAA 64
Query: 102 MSNRPHEIDGRVVETKRAVPREVKVR-----RVTKVQIALEQ--------MDYFGQYGTI 148
M+ PH +DG VE KRAV RE + +V K+ + + M +F Q+G
Sbjct: 65 MAASPHAVDGNAVELKRAVSREDSAKPGAHAKVKKLFVGGLKGDVGEGVLMQHFSQFGPX 124
Query: 149 ESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
E ++++K++G KRGF F+ F ++D DK + K
Sbjct: 125 EKAEIISDKQSGKKRGFGFVYFQNHDAADKAAVVK 159
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 17 VAGTVVPLAMIINKAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDV 73
V G V L +++ EDS ++P + ++KLF+GGL + L F Q+G
Sbjct: 72 VDGNAVELKRAVSR--EDS--AKPGAHAKVKKLFVGGLKGDVGEGVLMQHFSQFGPXEKA 127
Query: 74 VVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
++ D + + RGFGF+ + D+A + H I G VE K+AVP+E
Sbjct: 128 EIISDKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKE 177
>gi|342887592|gb|EGU87074.1| hypothetical protein FOXB_02468 [Fusarium oxysporum Fo5176]
Length = 541
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 97/157 (61%), Gaps = 11/157 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ ++K V+ M
Sbjct: 120 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMV- 178
Query: 105 RPHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNK 157
+ H +DG++++ KRA+PR+ + V V++ E +YF Q+G + ++ +K
Sbjct: 179 KEHFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDK 238
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
+TG RGF F+ F++ VD + V LE+ + I
Sbjct: 239 DTGRPRGFGFVTFENEAGVDACI---NVPLEIHGKPI 272
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D K +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 198 EQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGV 257
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D A N P EI G+ +E K+A PR
Sbjct: 258 D-ACINVPLEIHGKPIEVKKAQPR 280
>gi|332850902|ref|XP_001147948.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Pan troglodytes]
Length = 432
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 34/192 (17%)
Query: 14 GLEVAGTVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDV 73
G +GT+V + ++ ++ RKLF+GGLD+ T ++L+++F Q+GE+VD
Sbjct: 14 GAPCSGTLVAVQLLPWESTPG---------RKLFVGGLDWSTTQETLRSYFSQYGEVVDC 64
Query: 74 VVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRV---- 129
V+MKD T +SRGFGF+ + + V +++RPH +DGR ++ K PR ++ R
Sbjct: 65 VIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKE 124
Query: 130 -------------TKVQIA--------LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFI 168
K+ + E +YF ++G + V M+ + E RGF FI
Sbjct: 125 GWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFI 184
Query: 169 EFDDYDVVDKIV 180
F+D VD+ V
Sbjct: 185 TFEDEQSVDQAV 196
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 139 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 198
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 199 HFHDIMGKKVEVKRAEPRDSKSQ 221
>gi|400601150|gb|EJP68793.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 522
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 103/182 (56%), Gaps = 19/182 (10%)
Query: 20 TVVPLAMIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDP 79
T PL + + +D K+FIGGL++ T D SL+ +F Q+GE+V+ VM+D
Sbjct: 100 TAPPLGTVHKASAKDDG--------KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDS 151
Query: 80 VTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVK-------VRRVTKV 132
T RSRGFGF+T+ ++K V+ M + H +DG++++ KRA+PR+ + V V++
Sbjct: 152 NTGRSRGFGFLTFKDAKTVNIVMV-KEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQD 210
Query: 133 QIALEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQE 192
E D+F Q+G + ++ +K+TG RGF F+ F+ VD + + LE+ +
Sbjct: 211 TTDQEFRDFFAQFGRVIDATLMMDKDTGRPRGFGFVTFESEAGVDNCI---SIPLEIHGK 267
Query: 193 VI 194
I
Sbjct: 268 PI 269
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D + FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 195 EQEKTSKIFVGGVSQDTTDQEFRDFFAQFGRVIDATLMMDKDTGRPRGFGFVTFESEAGV 254
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D +S P EI G+ +E KRA PR
Sbjct: 255 DNCIS-IPLEIHGKPIEVKRAQPR 277
>gi|67900918|ref|XP_680715.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
gi|40742836|gb|EAA62026.1| hypothetical protein AN7446.2 [Aspergillus nidulans FGSC A4]
Length = 448
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 91/150 (60%), Gaps = 10/150 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + + +K+ Q A EQ +F Q+G + ++ +K
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+TG RGF F+ FD V+ + + +L
Sbjct: 119 DTGRPRGFGFVTFDSEAAVEAALSRPLEIL 148
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQEATEQDFKQFFMQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ A+S RP EI G+ +E K+A PR
Sbjct: 138 EAALS-RPLEILGKTIEVKKAQPR 160
>gi|413926094|gb|AFW66026.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 443
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 107/191 (56%), Gaps = 21/191 (10%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
ED + + +SL K+F+GG+ + T ++S FE++G I D V+MKD TK RGFGF+T+
Sbjct: 103 EDGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTF 162
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPRE-------VKVRR--VTKVQIAL---EQMD 140
S+ ++D+ + + H IDGR VE KR VPRE K R+ + + +L E D
Sbjct: 163 SDPSVIDKVLED-DHVIDGRTVEVKRTVPREEMITKDGPKTRKIFIGGLPPSLTEDELKD 221
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD--------KVVVLEVDQE 192
+F YG + ++ + TG RGF FI F+ D V++++ + K V ++ +
Sbjct: 222 HFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEP 281
Query: 193 VINGEDHRTHG 203
+G DH ++G
Sbjct: 282 KKHGSDHSSNG 292
>gi|408396972|gb|EKJ76123.1| hypothetical protein FPSE_03598 [Fusarium pseudograminearum CS3096]
Length = 546
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 97/157 (61%), Gaps = 11/157 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ ++K V+ M
Sbjct: 121 KMFIGGLNWETTDQSLRDYFAQFGEVVECTVMRDSSTGRSRGFGFLTFKDAKTVNIVMV- 179
Query: 105 RPHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNK 157
+ H +DG++++ KRA+PR+ + V V++ E +YF Q+G + ++ +K
Sbjct: 180 KEHFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDK 239
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
+TG RGF F+ F++ VD + V LE+ + I
Sbjct: 240 DTGRPRGFGFVTFENEAGVDACI---NVPLEIHGKPI 273
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D K +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 199 EQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFVTFENEAGV 258
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D A N P EI G+ +E K+A PR
Sbjct: 259 D-ACINVPLEIHGKPIEVKKAQPR 281
>gi|291243919|ref|XP_002741849.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Saccoglossus kowalevskii]
Length = 415
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 101/179 (56%), Gaps = 18/179 (10%)
Query: 26 MIINKAMEDSQCSEPESLR---------KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVM 76
+I K +D +C+ E + KLF+GGL + T LK +F+++G +VD +
Sbjct: 56 LIEAKGEDDYECAPGERINASKNQDDDGKLFVGGLSWETTQKDLKEYFKKFGPVVDCTIK 115
Query: 77 KDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA- 135
DPVT RSRGFGF+ +++ V++ + + H++DGR+++ KRA R + +TK+ +
Sbjct: 116 IDPVTGRSRGFGFVLFADGASVEKVLQPQEHKLDGRIIDPKRAKARGGQP-PITKIFVGG 174
Query: 136 -------LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
E DYF ++G I+ V + ++ T +RGF FIEF+ D V++I + +L
Sbjct: 175 LNPEYPENELRDYFTKFGAIKEVELPIDRATNKRRGFCFIEFEKEDSVEEICKQQFHLL 233
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 27 IINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
II+ ++ +P + K+F+GGL+ ++ L+ +F ++G I +V + D T + RG
Sbjct: 152 IIDPKRAKARGGQP-PITKIFVGGLNPEYPENELRDYFTKFGAIKEVELPIDRATNKRRG 210
Query: 87 FGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI 134
F FI + + V+E + H + E K+A P++ ++ +
Sbjct: 211 FCFIEFEKEDSVEEICKQQFHLLGNNKCEVKKATPKDQNTKQAVTAAV 258
>gi|444314863|ref|XP_004178089.1| hypothetical protein TBLA_0A07810 [Tetrapisispora blattae CBS 6284]
gi|387511128|emb|CCH58570.1| hypothetical protein TBLA_0A07810 [Tetrapisispora blattae CBS 6284]
Length = 472
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 93/149 (62%), Gaps = 10/149 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T +D L+ +F ++G ++DV +M D +SRGFGF+T+ S VDE +
Sbjct: 151 KMFIGGLNWDTTEDVLRQYFNKYGNVIDVKIMTDGHNGKSRGFGFLTFENSSSVDEVVKT 210
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTN 156
+ H +DG+V++ KRA+PRE + + K+ + E ++F Q+G+I ++ +
Sbjct: 211 Q-HILDGKVIDPKRAIPREEQ-DKTGKIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLD 268
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVV 185
K+TG RGF F+ +D D VDK+ +K +
Sbjct: 269 KDTGRSRGFGFVTYDSPDAVDKVCQNKFI 297
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + FF QWG I+D +M D T RSRGFGF+TY VD+ N
Sbjct: 235 KIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFVTYDSPDAVDKVCQN 294
Query: 105 RPHEIDGRVVETKRAVPR 122
+ E G+ +E KRA R
Sbjct: 295 KFIEFKGKTIEIKRAEQR 312
>gi|26350925|dbj|BAC39099.1| unnamed protein product [Mus musculus]
Length = 301
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 90/145 (62%), Gaps = 11/145 (7%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD+ ++
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTK----------VQIALEQMD-YFGQYGTIESVNMV 154
HE+D + ++ K A PR + + VT+ V +E + YF Q+G ++ ++
Sbjct: 61 RHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLM 120
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKI 179
+K T RGF F+ F+ D+V+K+
Sbjct: 121 FDKTTNRHRGFGFVTFESEDIVEKV 145
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 11/170 (6%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 88 KKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 147
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVT---KVQIALEQMDYFG------QYGTIESVNMV 154
HEI+ ++VE K+A P+EV + + ++ MD F Y ++
Sbjct: 148 IHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYA 207
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVIN-GEDHRTHG 203
+ TG G+ + +F ++ V + V+ E+ + + HR G
Sbjct: 208 SRSYTGLAPGYTY-QFPEFRVERSPLPSAPVLPELTGQWLRFRASHRPRG 256
>gi|102140031|gb|ABF70162.1| RNA-binding protein, putative [Musa acuminata]
Length = 465
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 25/164 (15%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLFIGG+ + TN+DSL+ +F +GE+V+ V+MKD T R+RGFGF+ +++ + + +
Sbjct: 5 LGKLFIGGISWDTNEDSLRKYFSAFGEVVEAVIMKDRTTGRARGFGFVVFADPAVTERVV 64
Query: 103 SNRPHEIDGRVVETKRAVPRE---------------------VKVRRVTKVQIALEQMD- 140
+ + H IDGR+VE K+AVPR+ K V + + + D
Sbjct: 65 TEK-HTIDGRMVEAKKAVPRDDHQFLNKNSSSSIHGSPVPGHTKKIFVGGLSSTITEGDF 123
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD 182
YF Q+GTI V ++ + T RGF FI +D D VDK++L+
Sbjct: 124 KKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLN 167
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 59/96 (61%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P +K+F+GGL + K +F+Q+G I DVVVM D T+R RGFGFITY VD
Sbjct: 103 PGHTKKIFVGGLSSTITEGDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVD 162
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA 135
+ + N HE++G++VE KRAVP+E + + I
Sbjct: 163 KVLLNAFHELNGKMVEVKRAVPKEPSPGPIMRSSIG 198
>gi|50548677|ref|XP_501808.1| YALI0C13860p [Yarrowia lipolytica]
gi|49647675|emb|CAG82118.1| YALI0C13860p [Yarrowia lipolytica CLIB122]
Length = 367
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 105/176 (59%), Gaps = 8/176 (4%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D+SL +F Q+GE+++ VM+D + +SRGFGF+T+ + K V+ M+ +
Sbjct: 1 MFIGGLNWETTDESLTNYFAQFGEVLECTVMRDHFSGKSRGFGFLTFRDPKCVNAVMA-K 59
Query: 106 PHEIDGRVVETKRAVPREVKVRR----VTKVQIALEQMDY---FGQYGTIESVNMVTNKE 158
H +DG++++ KRA+PRE + + V V + + DY F QYGT+ ++ +K+
Sbjct: 60 EHYLDGKIIDPKRAIPREEQDKTSKIFVGGVGSDVTEEDYKQFFEQYGTVIDAQLMIDKD 119
Query: 159 TGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGEDHRTHGTHQEAKVDGVT 214
+G RGF F+ FD ++ I+ +++L+ + ++R+ G A + V
Sbjct: 120 SGRPRGFGFVTFDSEQAMNTILAQPLLILKDKPIEVKRAENRSKGAGASAVANAVA 175
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E + K+F+GG+ ++ K FFEQ+G ++D +M D + R RGFGF+T+ + +
Sbjct: 78 EQDKTSKIFVGGVGSDVTEEDYKQFFEQYGTVIDAQLMIDKDSGRPRGFGFVTFDSEQAM 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ ++ + + +E KRA R
Sbjct: 138 NTILAQPLLILKDKPIEVKRAENR 161
>gi|432952652|ref|XP_004085179.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 240
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 86/143 (60%), Gaps = 14/143 (9%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL TNDD L+ FEQ+G ++D V+ +RSR FGF+TY + + AM+
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDFAVVPHKTAQRSRCFGFVTYLTPEEANAAMAA 66
Query: 105 RPHEIDGRVVETKRAVPREV--------KVRRV----TKVQIALEQM-DYFGQYGTIESV 151
PH ++G VE KRAVP++ KV+++ K I + + DYF QYG +E+
Sbjct: 67 SPHTVEGNWVEVKRAVPKKQTDESEARDKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENS 126
Query: 152 NMVTNKETGAKRGFAFIEF-DDY 173
+++ K TG KRGF F+ F DDY
Sbjct: 127 EIMSEKTTGKKRGFGFVHFTDDY 149
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 28 INKAMEDSQCSEPES---LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
+ +A+ Q E E+ ++K+F+GGL +D L +F Q+GE+ + +M + T +
Sbjct: 78 VKRAVPKKQTDESEARDKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENSEIMSEKTTGKK 137
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPRE 123
RGFGF+ +++ D A++ H ++G VE K+AVP++
Sbjct: 138 RGFGFVHFTDDYAADMAVAVPFHTVNGHRVEVKKAVPKQ 176
>gi|351699554|gb|EHB02473.1| DAZ-associated protein 1 [Heterocephalus glaber]
Length = 404
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 25/164 (15%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+ RKLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 5 NCRKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 64
Query: 102 MSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA--------L 136
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 65 LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGET 124
Query: 137 EQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 125 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 168
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 111 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 170
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 171 HFHDIMGKKVEVKRAEPRDSK 191
>gi|190347776|gb|EDK40115.2| hypothetical protein PGUG_04213 [Meyerozyma guilliermondii ATCC
6260]
Length = 306
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 104/182 (57%), Gaps = 11/182 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T + L +F ++GE+VD +M+D T +SRGFGF+T+ ++K VD +
Sbjct: 1 MFIGGLNWDTTEQGLVEYFSKFGEVVDHTIMRDSATGKSRGFGFLTFKDTKSVDAVIQGD 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+ RE + +V K+ + E D+F Q+G+I ++ +K
Sbjct: 61 -HVLDGKLIDPKRAIAREEQ-DKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ-EVINGEDHRTHGTHQEAKVDGVTTT 216
+TG RGF FI FD + VD++ ++K + L+ EV E H + + G
Sbjct: 119 DTGRSRGFGFITFDSPEAVDRVTVNKFLTLKGKSMEVKRAEPRGAHHGGSQQQGYGYNPY 178
Query: 217 NQ 218
NQ
Sbjct: 179 NQ 180
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E + + K+F+GG+D N+ FF Q+G I+D +M D T RSRGFGFIT+ + V
Sbjct: 78 EQDKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITFDSPEAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D N+ + G+ +E KRA PR
Sbjct: 138 DRVTVNKFLTLKGKSMEVKRAEPR 161
>gi|324525492|gb|ADY48554.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Ascaris suum]
Length = 73
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 60/73 (82%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL T D+SLK F+ +WGE++D +VMKDP TKRSRGFGF++Y++ MVDEAM+NR
Sbjct: 1 MFIGGLSSATTDESLKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVDEAMANR 60
Query: 106 PHEIDGRVVETKR 118
PH +DG+ V+ KR
Sbjct: 61 PHIVDGKTVDPKR 73
>gi|395513319|ref|XP_003760874.1| PREDICTED: DAZ-associated protein 1 [Sarcophilus harrisii]
Length = 424
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 88/162 (54%), Gaps = 25/162 (15%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
RKLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V ++
Sbjct: 27 RKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 86
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA--------LEQ 138
+RPH +DGR ++ K PR ++ R K+ + E
Sbjct: 87 SRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETEL 146
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 147 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 188
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 131 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 190
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 191 HFHDIMGKKVEVKRAEPRDSK 211
>gi|405977312|gb|EKC41770.1| Heterogeneous nuclear ribonucleoprotein 27C [Crassostrea gigas]
Length = 569
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 37/192 (19%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+KLFIGGL + T+ DSL FF Q+GE++D VVMK+ T +SRGFGF+T+++++ VD +S
Sbjct: 41 KKLFIGGLSWDTDQDSLLNFFSQYGEVIDCVVMKNQQTGKSRGFGFVTFNDAQCVDTVLS 100
Query: 104 NRPHEIDGRVVETKRAVPREV-----------------------KVRRVTKVQIALEQMD 140
PH IDGR V+ K P+ K +++ L +D
Sbjct: 101 AAPHTIDGRQVDAKPCNPKAANKGPKDGGGRIHGGGGGGGGGGDKDKKI--FMGGLPNVD 158
Query: 141 ------YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ--- 191
+FG+YG + VN++ +++ RGF F+ F+ D VD++ + + + Q
Sbjct: 159 EDFLRNFFGKYGKVLDVNIMIDQQNKKSRGFGFLTFESEDAVDQVCAEHFININGKQVEC 218
Query: 192 ---EVINGEDHR 200
E +G D++
Sbjct: 219 KRAEPRDGRDNK 230
>gi|239051430|ref|NP_001131946.2| uncharacterized protein LOC100193339 [Zea mays]
gi|194695014|gb|ACF81591.1| unknown [Zea mays]
gi|223947685|gb|ACN27926.1| unknown [Zea mays]
gi|238908636|gb|ACF80580.2| unknown [Zea mays]
gi|413926096|gb|AFW66028.1| heterogeneous nuclear ribonucleoprotein A3 isoform 1 [Zea mays]
gi|413926097|gb|AFW66029.1| heterogeneous nuclear ribonucleoprotein A3 isoform 2 [Zea mays]
gi|413926098|gb|AFW66030.1| heterogeneous nuclear ribonucleoprotein A3 isoform 3 [Zea mays]
Length = 384
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 107/191 (56%), Gaps = 21/191 (10%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
ED + + +SL K+F+GG+ + T ++S FE++G I D V+MKD TK RGFGF+T+
Sbjct: 44 EDGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTF 103
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPRE-------VKVRR--VTKVQIAL---EQMD 140
S+ ++D+ + + H IDGR VE KR VPRE K R+ + + +L E D
Sbjct: 104 SDPSVIDKVLED-DHVIDGRTVEVKRTVPREEMITKDGPKTRKIFIGGLPPSLTEDELKD 162
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD--------KVVVLEVDQE 192
+F YG + ++ + TG RGF FI F+ D V++++ + K V ++ +
Sbjct: 163 HFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEP 222
Query: 193 VINGEDHRTHG 203
+G DH ++G
Sbjct: 223 KKHGSDHSSNG 233
>gi|302509632|ref|XP_003016776.1| hypothetical protein ARB_05069 [Arthroderma benhamiae CBS 112371]
gi|291180346|gb|EFE36131.1| hypothetical protein ARB_05069 [Arthroderma benhamiae CBS 112371]
Length = 489
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 95/157 (60%), Gaps = 13/157 (8%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SLK +F Q+GE+ + VM+D + RSRGFGF+T+++ K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + R +K+ Q A EQ +F Q+G + ++ +K
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQ-ERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
+TG RGF F+ FD V+ + V LE+ + I
Sbjct: 119 DTGRPRGFGFVTFDSEAAVEATL---SVPLEIHGKAI 152
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ +S P EI G+ +E K+A PR
Sbjct: 138 EATLS-VPLEIHGKAIEVKKAQPR 160
>gi|148703784|gb|EDL35731.1| mCG52115 [Mus musculus]
Length = 156
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 85/155 (54%), Gaps = 22/155 (14%)
Query: 32 MEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFIT 91
ME E E LRKLFIGGL + T DDSL+ FE+WG + D V+M +P TK SR +GF+T
Sbjct: 1 MEGHDPKEAEQLRKLFIGGLSFETTDDSLREQFEKWGTLTDCVLMSNPQTKCSRDYGFVT 60
Query: 92 YSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI----------------- 134
YS + VD+AM +PH++ G VV+ KRA+ RE V+ + +
Sbjct: 61 YSCVEEVDDAMCTQPHKVYGHVVKLKRAISRENSVKPGPQTNLDSNSDLTVKKIFVGSIK 120
Query: 135 ----ALEQMDYFGQYGTIESVNMVTNKETGAKRGF 165
Q FG+YG I ++ + N+++G KR
Sbjct: 121 ENMKKYNQRINFGKYGKIATIE-IENRQSGKKRNL 154
>gi|261194978|ref|XP_002623893.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239587765|gb|EEQ70408.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis SLH14081]
gi|239610740|gb|EEQ87727.1| heterogeneous nuclear ribonucleoprotein HRP1 [Ajellomyces
dermatitidis ER-3]
gi|327348818|gb|EGE77675.1| hypothetical protein BDDG_00612 [Ajellomyces dermatitidis ATCC
18188]
Length = 530
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 91/150 (60%), Gaps = 10/150 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + R +K+ Q A EQ +F Q+G + ++ +K
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQ-ERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
++G RGF F+ FD V+ + + +L
Sbjct: 119 DSGRPRGFGFVTFDSEAAVEATLSGPLEIL 148
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K FF Q+G +VD +M D + R RGFGF+T+ V
Sbjct: 78 EQERTSKIFVGGVSQEATEQDFKQFFMQFGRVVDATLMIDKDSGRPRGFGFVTFDSEAAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ +S P EI G+ +E K+A PR
Sbjct: 138 EATLSG-PLEILGKPIEVKKAQPR 160
>gi|158296251|ref|XP_001688945.1| AGAP006656-PB [Anopheles gambiae str. PEST]
gi|157016421|gb|EDO63951.1| AGAP006656-PB [Anopheles gambiae str. PEST]
Length = 327
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 82/132 (62%), Gaps = 11/132 (8%)
Query: 59 SLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKR 118
SL+ +F ++GEI +V+VMKDP T+RSRGFGFIT+ + VD+ +++ HE+DG+ ++ K
Sbjct: 1 SLRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKV 60
Query: 119 AVPREVKVRRVTKVQ----------IALEQM-DYFGQYGTIESVNMVTNKETGAKRGFAF 167
A PR + VT+ + LE + YF Q+G IE ++ +K+T RGF F
Sbjct: 61 AFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGF 120
Query: 168 IEFDDYDVVDKI 179
+ F DVVDK+
Sbjct: 121 VTFQSEDVVDKV 132
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K++FEQ+G I D ++M D T R RGFGF+T+ +VD+
Sbjct: 75 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 134
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 135 IHFHEINNKMVECKKAQPKEV 155
>gi|327303046|ref|XP_003236215.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton rubrum
CBS 118892]
gi|326461557|gb|EGD87010.1| heterogeneous nuclear ribonucleoprotein HRP1 [Trichophyton rubrum
CBS 118892]
Length = 489
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 95/157 (60%), Gaps = 13/157 (8%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SLK +F Q+GE+ + VM+D + RSRGFGF+T+++ K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKEYFSQFGEVHECTVMRDGASGRSRGFGFLTFTDPKTVNTVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + R +K+ Q A EQ +F Q+G + ++ +K
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQ-ERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
+TG RGF F+ FD V+ + V LE+ + I
Sbjct: 119 DTGRPRGFGFVTFDSEAAVEATL---SVPLEIHGKAI 152
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQERTSKIFVGGVSQEATEQEFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ +S P EI G+ +E K+A PR
Sbjct: 138 EATLS-VPLEIHGKAIEVKKAQPR 160
>gi|148233322|ref|NP_001080493.1| heterogeneous nuclear ribonucleoprotein A0 [Xenopus laevis]
gi|27924337|gb|AAH45023.1| Hnrpa0-prov protein [Xenopus laevis]
Length = 308
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 91/154 (59%), Gaps = 13/154 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLFIGGL+ +T ++ L+ FE +G++ D VV+ +P TKRSR FGF+TYS + D A+
Sbjct: 11 LCKLFIGGLNVQTTEEGLRQHFETYGQLTDCVVVINPQTKRSRCFGFVTYSSAAEADAAV 70
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ-------MDYFGQYGTIE 149
PH +DG VE KRAV RE + ++ L++ +++F Q+G +E
Sbjct: 71 EAAPHVVDGNNVELKRAVSREDSAKPGAHAKVKKLFVGGLKEEVGESDLLEHFSQFGAVE 130
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
V ++ +K +G KRGF F+ F +D DK + K
Sbjct: 131 RVEIIADKLSGKKRGFGFVYFASHDSADKAAVVK 164
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
++KLF+GGL + L F Q+G + V ++ D ++ + RGFGF+ ++ D+A
Sbjct: 102 VKKLFVGGLKEEVGESDLLEHFSQFGAVERVEIIADKLSGKKRGFGFVYFASHDSADKAA 161
Query: 103 SNRPHEIDGRVVETKRAVPRE 123
+ H ++G VE K+AVP+E
Sbjct: 162 VVKFHSVNGHRVEVKKAVPKE 182
>gi|171694297|ref|XP_001912073.1| hypothetical protein [Podospora anserina S mat+]
gi|170947097|emb|CAP73902.1| unnamed protein product [Podospora anserina S mat+]
Length = 513
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 86/139 (61%), Gaps = 8/139 (5%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P RK+FIGGL++ T D SL+ +F +GE+V+ VM+D T RSRGFGF+T+ + K V+
Sbjct: 10 PLYFRKMFIGGLNWETTDQSLRDYFSTFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVN 69
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVN 152
M H +DG++++ KRA+PR+ + V V++ E +YF Q+G +
Sbjct: 70 IVMVKE-HYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDAT 128
Query: 153 MVTNKETGAKRGFAFIEFD 171
++ +K+TG RGF F+ F+
Sbjct: 129 LMMDKDTGRPRGFGFVTFE 147
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 93 EQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 152
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ +S EI G+ +E K+A PR
Sbjct: 153 EACLSAN-LEIHGKPIEVKKAQPR 175
>gi|146415028|ref|XP_001483484.1| hypothetical protein PGUG_04213 [Meyerozyma guilliermondii ATCC
6260]
Length = 306
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 95/151 (62%), Gaps = 10/151 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T + L +F ++GE+VD +M+D T +SRGFGF+T+ ++K VD +
Sbjct: 1 MFIGGLNWDTTEQGLVEYFSKFGEVVDHTIMRDSATGKSRGFGFLTFKDTKSVDAVIQGD 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKVQIA--------LEQMDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+ RE + +V K+ + E D+F Q+G+I ++ +K
Sbjct: 61 -HVLDGKLIDPKRAIAREEQ-DKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+TG RGF FI FD + VD++ ++K + L+
Sbjct: 119 DTGRSRGFGFITFDSPEAVDRVTVNKFLTLK 149
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E + + K+F+GG+D N+ FF Q+G I+D +M D T RSRGFGFIT+ + V
Sbjct: 78 EQDKVGKIFVGGIDPMVNEKEFHDFFSQFGSIIDAQLMIDKDTGRSRGFGFITFDSPEAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D N+ + G+ +E KRA PR
Sbjct: 138 DRVTVNKFLTLKGKSMEVKRAEPR 161
>gi|449273028|gb|EMC82657.1| DAZ-associated protein 1, partial [Columba livia]
Length = 395
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 22/158 (13%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 105 RPHEIDGRVVETK----------RAVPREVKVRRVTKVQIAL------------EQMDYF 142
RPH +DGR ++ K R P+E VR+ T E +YF
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWVRKDTWCSCDFIINGIPHNCGETELREYF 120
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 121 KKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 158
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 53/82 (64%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
I G+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 102 FIINGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMH 161
Query: 106 PHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 162 FHDIMGKKVEVKRAEPRDSKSQ 183
>gi|344284992|ref|XP_003414248.1| PREDICTED: hypothetical protein LOC100654996 [Loxodonta africana]
Length = 595
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 338 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 397
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 398 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 456
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 457 NKTNKRRGFCFITFKEEEPVKKIMEKK 483
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 419 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 478
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 479 IMEKKYHNVGLSKCEIKVAMSKE 501
>gi|121715226|ref|XP_001275222.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
gi|119403379|gb|EAW13796.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus clavatus
NRRL 1]
Length = 466
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 90/149 (60%), Gaps = 10/149 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + + +K+ Q A EQ +F Q+G + ++ +K
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEATEQEFKGFFMQFGRVVDATLMIDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVV 186
+TG RGF F+ FD V+ + + +
Sbjct: 119 DTGRPRGFGFVTFDSEAAVENALSRPLAI 147
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ + K FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQEATEQEFKGFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ A+S RP I G+ +E K+A PR
Sbjct: 138 ENALS-RPLAICGKPIEVKKAQPR 160
>gi|238501964|ref|XP_002382216.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
gi|83767075|dbj|BAE57215.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692453|gb|EED48800.1| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus flavus
NRRL3357]
Length = 445
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 91/150 (60%), Gaps = 10/150 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + + +K+ Q A EQ +F Q+G + ++ +K
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+TG RGF F+ FD V+ + + +L
Sbjct: 119 DTGRPRGFGFVTFDSEAAVEAALSRPLEIL 148
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ N+ K FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQEANEQDFKQFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ A+S RP EI G+ +E K+A PR
Sbjct: 138 EAALS-RPLEILGKPIEVKKAQPR 160
>gi|344235610|gb|EGV91713.1| Heterogeneous nuclear ribonucleoprotein A3 [Cricetulus griseus]
Length = 146
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 80/125 (64%), Gaps = 13/125 (10%)
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR-----RVT 130
M+DP TKRSRGFGF+TYS + VD AM +PH+IDG VV KRAV RE ++ V
Sbjct: 1 MRDPQTKRSRGFGFVTYSCVEEVDAAMCAQPHKIDGSVVAPKRAVSREGSIKPGAHLTVK 60
Query: 131 KVQIA--------LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD 182
K+ + DYF +YG IE++ ++ ++++G KRGF F+ FDD+D VDKIV+
Sbjct: 61 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFVFVTFDDHDTVDKIVVQ 120
Query: 183 KVVVL 187
K + +
Sbjct: 121 KYLTI 125
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 53/82 (64%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + +L+ +FE++G+I + VM+D + + RGF F+T+ + VD+
Sbjct: 58 TVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFVFVTFDDHDTVDKI 117
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + I+G E K+A+ ++
Sbjct: 118 VVQKYLTINGHNCEVKKALSKQ 139
>gi|291401535|ref|XP_002717031.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Oryctolagus
cuniculus]
Length = 448
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 191 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 250
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 251 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 309
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 310 NKTNKRRGFCFITFKEEEPVKKIMEKK 336
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 272 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 331
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 332 IMEKKYHNVGLSKCEIKVAMSKE 354
>gi|508270|gb|AAA64654.1| A+U-rich RNA-binding protein [Mus musculus]
Length = 269
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 89/147 (60%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 67 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 126
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 127 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 185
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
K+T +RGF FI F + + V KI+ K
Sbjct: 186 KKTNKRRGFCFITFKEEEPVKKIMEKK 212
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 148 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDKKTNKRRGFCFITFKEEEPVKK 207
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 208 IMEKKYHNVGLSKCEIKVAMSKE 230
>gi|345323573|ref|XP_001508014.2| PREDICTED: DAZ-associated protein 1-like [Ornithorhynchus anatinus]
Length = 445
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 87/161 (54%), Gaps = 25/161 (15%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGLD+ T ++L+++F Q+GE++D V+MKD T +SRGFGF+ + + V +++
Sbjct: 50 KLFVGGLDWSTTQETLRSYFSQYGEVIDCVIMKDKTTNQSRGFGFVKFKDPNCVGAVLAS 109
Query: 105 RPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA--------LEQM 139
RPH +DGR ++ K PR ++ R K+ + E
Sbjct: 110 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNNKSNKIFVGGIPHNCGETELR 169
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 170 EYFKKFGVVSEVVMIYDAEKQRPRGFGFITFEDQQSVDQAV 210
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 153 KIFVGGIPHNCGETELREYFKKFGVVSEVVMIYDAEKQRPRGFGFITFEDQQSVDQAVNM 212
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 213 HFHDIMGKKVEVKRAEPRDSK 233
>gi|317027293|ref|XP_001400598.2| heterogeneous nuclear ribonucleoprotein HRP1 [Aspergillus niger CBS
513.88]
Length = 561
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 94/163 (57%), Gaps = 15/163 (9%)
Query: 31 AMEDSQCSEPESLR-----KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSR 85
AM SEP K+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSR
Sbjct: 90 AMSGGGESEPRGTGIKEDGKMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSR 149
Query: 86 GFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ- 138
GFGF+T+ + K V+ M H +DG++++ KRA+PR+ + + +K+ Q A E
Sbjct: 150 GFGFLTFRDPKTVNTVMVKE-HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEANEHD 207
Query: 139 -MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
++F Q+G + ++ +K+TG RGF F+ FD V+ +
Sbjct: 208 FKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAVEAAL 250
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ N+ K FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 187 EQEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAV 246
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ A+S P EI G+ +E K+A PR
Sbjct: 247 EAALSG-PLEICGKPIEVKKAQPR 269
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
DYF Q+G ++ ++ + TG RGF F+ F D V+ +++
Sbjct: 126 DYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMV 167
>gi|350635265|gb|EHA23627.1| hypothetical protein ASPNIDRAFT_52492 [Aspergillus niger ATCC 1015]
Length = 580
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 89/144 (61%), Gaps = 10/144 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 109 KMFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVK 168
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
H +DG++++ KRA+PR+ + + +K+ Q A E ++F Q+G + ++ +
Sbjct: 169 E-HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMID 226
Query: 157 KETGAKRGFAFIEFDDYDVVDKIV 180
K+TG RGF F+ FD V+ +
Sbjct: 227 KDTGRPRGFGFVTFDSEAAVEAAL 250
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ N+ K FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 187 EQEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAV 246
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ A+S P EI G+ +E K+A PR
Sbjct: 247 EAALSG-PLEICGKPIEVKKAQPR 269
Score = 37.4 bits (85), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
DYF Q+G ++ ++ + TG RGF F+ F D V+ +++
Sbjct: 126 DYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMV 167
>gi|195999482|ref|XP_002109609.1| hypothetical protein TRIADDRAFT_20799 [Trichoplax adhaerens]
gi|190587733|gb|EDV27775.1| hypothetical protein TRIADDRAFT_20799 [Trichoplax adhaerens]
Length = 154
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 89/150 (59%), Gaps = 14/150 (9%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T D++L+ +F ++G+I D VV+ + +++ RGFGF+TY + V ++
Sbjct: 2 KIFIGGLSFDTTDETLRNYFAKYGDIADSVVICESGSRKPRGFGFVTYKDVTSVKNCLAG 61
Query: 105 RPHEIDGRVVETKRAVPREVK------VRRVTKVQIA--------LEQMDYFGQYGTIES 150
PH+IDG+ VE K AVPRE RR K+ I E YF Q+G I +
Sbjct: 62 IPHQIDGKTVEVKHAVPRESNELAAPHERRSKKIFIGGLGASTTETEIRQYFNQFGKILN 121
Query: 151 VNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+++ +++T RGF F+ F+ D VDK++
Sbjct: 122 IDLKKDRDTNVLRGFGFVVFEAEDSVDKVL 151
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 33 EDSQCSEPESLR--KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
E ++ + P R K+FIGGL T + ++ +F Q+G+I+++ + KD T RGFGF+
Sbjct: 80 ESNELAAPHERRSKKIFIGGLGASTTETEIRQYFNQFGKILNIDLKKDRDTNVLRGFGFV 139
Query: 91 TYSESKMVDEAMSNR 105
+ VD+ ++ R
Sbjct: 140 VFEAEDSVDKVLTAR 154
>gi|410976792|ref|XP_003994797.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Felis catus]
Length = 380
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 88/143 (61%), Gaps = 11/143 (7%)
Query: 48 IGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPH 107
IGGL ++T + L+ +F Q+GE+ + +VM+DP+TKRSRGFGF+T+ + VD+ ++ H
Sbjct: 42 IGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRH 101
Query: 108 EIDGRVVETKRAVPREVKVRRVTK----------VQIALEQM-DYFGQYGTIESVNMVTN 156
E+D + ++ K A PR + + VT+ V +E + YF Q+G ++ ++ +
Sbjct: 102 ELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFD 161
Query: 157 KETGAKRGFAFIEFDDYDVVDKI 179
K T RGF F+ F+ D+V+K+
Sbjct: 162 KTTNRHRGFGFVTFESEDIVEKV 184
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 127 KKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 186
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVT---KVQIALEQMDYFG------QYGTIESVNMV 154
HEI+ ++VE K+A P+EV + + ++ MD F Y ++
Sbjct: 187 IHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQATTYA 246
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
+ TG G+ + +F ++ V++ L VL
Sbjct: 247 SRSYTGLAPGYTY-QFPEFR-VERTPLPSAPVLP 278
>gi|303312249|ref|XP_003066136.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105798|gb|EER23991.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040133|gb|EFW22067.1| heterogeneous nuclear ribonucleoprotein HRP1 [Coccidioides
posadasii str. Silveira]
Length = 495
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 91/150 (60%), Gaps = 10/150 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDGATGRSRGFGFLTFKDPKTVNTVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + R +K+ Q A EQ +F Q+G + ++ +K
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQ-ERTSKIFVGGVSQDANEQDFKKFFMQFGRVVDATLMIDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+TG RGF F+ FD V+ + + +L
Sbjct: 119 DTGRPRGFGFVTFDSEAAVEACLSQPLEIL 148
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ N+ K FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQERTSKIFVGGVSQDANEQDFKKFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ +S +P EI G+ +E K+A PR
Sbjct: 138 EACLS-QPLEILGKPIEVKKAQPR 160
>gi|195628644|gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 384
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 107/191 (56%), Gaps = 21/191 (10%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
ED + + +SL K+F+GG+ + T ++S FE++G I D V+MKD TK RGFGF+T+
Sbjct: 44 EDGRGAGGDSLGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTF 103
Query: 93 SESKMVDEAMSNRPHEIDGRVVETKRAVPRE-------VKVRR--VTKVQIAL---EQMD 140
S+ ++D+ + + H IDGR VE KR VPRE K R+ + + +L E D
Sbjct: 104 SDPSVIDKVLED-DHVIDGRTVEVKRTVPREEMITKDGPKTRKIFIGGLPPSLTEDELKD 162
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLD--------KVVVLEVDQE 192
+F YG + ++ + TG RGF F+ F+ D V++++ + K V ++ +
Sbjct: 163 HFSSYGNVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEP 222
Query: 193 VINGEDHRTHG 203
+G DH ++G
Sbjct: 223 KKHGSDHSSNG 233
>gi|255726600|ref|XP_002548226.1| hypothetical protein CTRG_02523 [Candida tropicalis MYA-3404]
gi|240134150|gb|EER33705.1| hypothetical protein CTRG_02523 [Candida tropicalis MYA-3404]
Length = 472
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 96/152 (63%), Gaps = 10/152 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K F+GGLD++T ++ L F ++GEIVD +MKD T RSRGFGF+T+ + VD + +
Sbjct: 144 KTFLGGLDWQTTEEKLVEHFSKYGEIVDYTIMKDNATGRSRGFGFLTFKDPASVDALLKD 203
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQI-ALEQM-------DYFGQYGTIESVNMVTN 156
R H +DG++++ KRA+ +E + +V K+ I ++ M ++F Q+G I ++ +
Sbjct: 204 R-HILDGKLIDPKRAISKEDQ-EKVGKIFIGGIDPMVTEQEFDEFFSQFGKIIDCQLMID 261
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDKVVVLE 188
K+TG RGF FI +D VD++ ++K + L+
Sbjct: 262 KDTGRSRGFGFITYDSPAAVDRVCVNKYLTLK 293
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E + K+FIGG+D + FF Q+G+I+D +M D T RSRGFGFITY VD
Sbjct: 224 EKVGKIFIGGIDPMVTEQEFDEFFSQFGKIIDCQLMIDKDTGRSRGFGFITYDSPAAVDR 283
Query: 101 AMSNRPHEIDGRVVETKRAVPR 122
N+ + G+ +E KRA PR
Sbjct: 284 VCVNKYLTLKGKAMEVKRAAPR 305
>gi|55742017|ref|NP_001006737.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
gi|49522454|gb|AAH75497.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 28/163 (17%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQ-------------------------- 138
RPH +DGR ++ K PR ++ R T+ + +Q
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPER-TRPREGWQQKGPRTENSRSNKIFVGGIPHNCGETE 129
Query: 139 -MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 130 LREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 172
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 115 KIFVGGIPHNCGETELREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 174
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 175 HFHDIMGKKVEVKRAEPRDSK 195
>gi|358339324|dbj|GAA47410.1| RNA-binding protein Musashi [Clonorchis sinensis]
Length = 957
Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats.
Identities = 59/152 (38%), Positives = 91/152 (59%), Gaps = 9/152 (5%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
+E + KLF+GGL TN+ SL+ +F ++GE+ D VVM D T RSRGFG++ Y E +
Sbjct: 4 AEGNEIGKLFVGGLSQATNNGSLRLYFSRFGEVDDAVVMMDNKTGRSRGFGYVKYREPES 63
Query: 98 VDEAMSNRPHEIDGRVVETKRA-VPREVKVRRVTKV---QIALEQ-----MDYFGQYGTI 148
V A+ +PH +DG+ V+ K+ V + + RR KV I L+Q +YF Q+G +
Sbjct: 64 VTLALEAKPHILDGKEVDAKQCNVNMKGRNRRSLKVFVGGIGLDQDAESIKNYFRQFGRV 123
Query: 149 ESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
VN++ + RGFAF+ F+D VV +++
Sbjct: 124 TDVNLMMDSNKQRHRGFAFVGFEDEAVVKRLI 155
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 43/77 (55%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + +S+K +F Q+G + DV +M D +R RGF F+ + + +V +S
Sbjct: 98 KVFVGGIGLDQDAESIKNYFRQFGRVTDVNLMMDSNKQRHRGFAFVGFEDEAVVKRLISL 157
Query: 105 RPHEIDGRVVETKRAVP 121
++ + VE K P
Sbjct: 158 HYVTMNNKQVEIKAMEP 174
>gi|410225574|gb|JAA10006.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKSQ 196
>gi|426232266|ref|XP_004010154.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Ovis aries]
Length = 421
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 99/177 (55%), Gaps = 13/177 (7%)
Query: 19 GTVVPLAMIINKAMEDSQCSEPESLR----KLFIGGLDYRTNDDSLKAFFEQWGEIVDVV 74
G +P ++ + + SE + + K+FIGGL + T LK +F ++GE+VD
Sbjct: 134 GYWIPRLLVKYHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCT 193
Query: 75 VMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI 134
+ DP+T RSRGFGF+ + ES+ VD+ M + H+++G+V++ KRA + K V K+ +
Sbjct: 194 LKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRAKAMKTK-EPVKKIFV 252
Query: 135 ALEQMD--------YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
D YFG +G +ES+ + + +T +RGF FI F + + V KI+ K
Sbjct: 253 GGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 309
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 245 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 304
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 305 IMEKKYHNVGLSKCEIKVAMSKE 327
>gi|115400789|ref|XP_001215983.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
gi|114191649|gb|EAU33349.1| hypothetical protein ATEG_06805 [Aspergillus terreus NIH2624]
Length = 454
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 91/150 (60%), Gaps = 10/150 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + + +K+ Q A EQ +F Q+G + ++ +K
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEANEQDFKSFFMQFGRVVDATLMIDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVL 187
+TG RGF F+ FD V+ + + +L
Sbjct: 119 DTGRPRGFGFVTFDSEAAVEAALSRPLEIL 148
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ N+ K+FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQEANEQDFKSFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ A+S RP EI G+ +E K+A PR
Sbjct: 138 EAALS-RPLEILGKPIEVKKAQPR 160
>gi|410256498|gb|JAA16216.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298130|gb|JAA27665.1| DAZ associated protein 1 [Pan troglodytes]
Length = 379
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKSQ 196
>gi|25470890|ref|NP_733829.1| DAZ-associated protein 1 isoform a [Homo sapiens]
gi|395750099|ref|XP_003779062.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Pongo abelii]
gi|402903561|ref|XP_003914632.1| PREDICTED: DAZ-associated protein 1 isoform 2 [Papio anubis]
gi|119589909|gb|EAW69503.1| DAZ associated protein 1, isoform CRA_c [Homo sapiens]
Length = 378
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKSQ 196
>gi|334310867|ref|XP_001381121.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Monodelphis domestica]
Length = 376
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 90/151 (59%), Gaps = 10/151 (6%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E K+F+GGL + T+ LK +F ++GE+VD + DP T RSRGFGFI + ES VD+
Sbjct: 94 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDK 153
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ--MDYFGQYGTIESVN 152
+ + H +DGRV++ K+A+ +K V K+ + A E +YFG +G IES+
Sbjct: 154 VLDQKEHRLDGRVIDPKKAM--AMKKDPVKKIFVGGLNPEATEDKIREYFGDFGEIESIE 211
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+ + +T +RGF FI F + D V KI+ K
Sbjct: 212 LPMDPKTNKRRGFVFITFKEEDPVKKILEKK 242
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ ++K+F+GGL+ +D ++ +F +GEI + + DP T + RGF FIT+ E V +
Sbjct: 178 DPVKKIFVGGLNPEATEDKIREYFGDFGEIESIELPMDPKTNKRRGFVFITFKEEDPVKK 237
Query: 101 AMSNRPHEIDGRVVETKRAVPREV 124
+ + H + G E K A P+EV
Sbjct: 238 ILEKKFHNVGGSKCEIKVAQPKEV 261
>gi|391328905|ref|XP_003738923.1| PREDICTED: RNA-binding protein squid-like [Metaseiulus
occidentalis]
Length = 299
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 92/160 (57%), Gaps = 13/160 (8%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
RKLF GGL + T D L++ FE++GEI + V DP+TK+SRGFGFIT+ + V++A++
Sbjct: 45 RKLFCGGLSFDTTDADLRSHFEKYGEIQECTVKMDPMTKKSRGFGFITFGSKQAVEDAIA 104
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD-----YFGQYGTIESVNMVTNKE 158
PH I G+ ++ K A R ++V + E + YFGQYG IE++ + +KE
Sbjct: 105 GAPHTIKGKQIDPKAAKAR-PGAKKVFCGGLPPETTEEEIRTYFGQYGNIEALELPVDKE 163
Query: 159 TGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVINGED 198
+RGF F+ ++ D ++ ++ ING++
Sbjct: 164 KNQRRGFIFVTYETTAAAD-------AAVKKPKQTINGKE 196
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F GGL T ++ ++ +F Q+G I + + D + RGF F+TY + D A+
Sbjct: 127 KKVFCGGLPPETTEEEIRTYFGQYGNIEALELPVDKEKNQRRGFIFVTYETTAAADAAVK 186
Query: 104 NRPHEIDGRVVETKRAVPR 122
I+G+ + K+A P+
Sbjct: 187 KPKQTINGKECDVKKATPK 205
>gi|440474936|gb|ELQ43651.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
Y34]
gi|440479945|gb|ELQ60674.1| heterogeneous nuclear ribonucleoprotein A/B [Magnaporthe oryzae
P131]
Length = 632
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 87/136 (63%), Gaps = 8/136 (5%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
K+FIGGL++ T D+SL+ +F Q+GE+++ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 182 FSKMFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNIVM 241
Query: 103 SNRPHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVT 155
+ H +DG++++ KRA+PR+ + V V++ E D+F Q+G + ++
Sbjct: 242 V-KEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKDFFAQFGRVVDATLMM 300
Query: 156 NKETGAKRGFAFIEFD 171
+K+TG RGF F+ F+
Sbjct: 301 DKDTGRPRGFGFVTFE 316
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D K FF Q+G +VD +M D T R RGFGF+T+ ES+
Sbjct: 262 EQEKTSKIFVGGVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTF-ESEAG 320
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
EA R EI G+++E K+A PR
Sbjct: 321 VEACLARDLEIHGKLIEVKKAQPR 344
>gi|327291027|ref|XP_003230223.1| PREDICTED: DAZ-associated protein 1-like, partial [Anolis
carolinensis]
Length = 170
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 23/159 (14%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 105 RPHEIDGRVVETKRAVPREVKVRRV---------------TKVQIA--------LEQMDY 141
RPH +DGR ++ K PR ++ R K+ + E +Y
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGSRSDSKSNKIFVGGIPHNCGETELREY 120
Query: 142 FGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
F ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 121 FKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 159
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 47/68 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 102 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 161
Query: 105 RPHEIDGR 112
H+I G+
Sbjct: 162 HFHDIMGK 169
>gi|327265526|ref|XP_003217559.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Anolis
carolinensis]
Length = 367
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 93/151 (61%), Gaps = 10/151 (6%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E K+F+GGL + T+ LK +F ++GE+ D + DP T RSRGFGFI + E+ VD+
Sbjct: 109 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFILFKEAASVDK 168
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRVTKV-------QIALEQM-DYFGQYGTIESVN 152
+ + H++DGRV++ K+A+ +K V K+ + A E++ +YFG++G IE++
Sbjct: 169 VLEQKEHKLDGRVIDPKKAM--AMKKDPVKKIFVGGLNPEAAEEKIREYFGEFGEIEAIE 226
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+ + +T +RGF FI F + D V KI+ K
Sbjct: 227 LPMDPKTNKRRGFVFITFKEEDPVKKILEKK 257
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ ++K+F+GGL+ ++ ++ +F ++GEI + + DP T + RGF FIT+ E V +
Sbjct: 193 DPVKKIFVGGLNPEAAEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKK 252
Query: 101 AMSNRPHEIDGRVVETKRAVPREV 124
+ + H + G E K A P+EV
Sbjct: 253 ILEKKFHNVSGSKCEIKVAQPKEV 276
>gi|158296255|ref|XP_001688946.1| AGAP006656-PA [Anopheles gambiae str. PEST]
gi|157016423|gb|EDO63952.1| AGAP006656-PA [Anopheles gambiae str. PEST]
Length = 237
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 82/132 (62%), Gaps = 11/132 (8%)
Query: 59 SLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKR 118
SL+ +F ++GEI +V+VMKDP T+RSRGFGFIT+ + VD+ +++ HE+DG+ ++ K
Sbjct: 1 SLRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKV 60
Query: 119 AVPREVKVRRVTKVQ----------IALEQM-DYFGQYGTIESVNMVTNKETGAKRGFAF 167
A PR + VT+ + LE + YF Q+G IE ++ +K+T RGF F
Sbjct: 61 AFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGF 120
Query: 168 IEFDDYDVVDKI 179
+ F DVVDK+
Sbjct: 121 VTFQSEDVVDKV 132
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 54/81 (66%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K++FEQ+G I D ++M D T R RGFGF+T+ +VD+
Sbjct: 75 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 134
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HEI+ ++VE K+A P+EV
Sbjct: 135 IHFHEINNKMVECKKAQPKEV 155
>gi|341875918|gb|EGT31853.1| hypothetical protein CAEBREN_22820 [Caenorhabditis brenneri]
Length = 224
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 79/154 (51%), Gaps = 25/154 (16%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P LRKLFIGGL + N+ L +F QWG ++D V++DP T++SRGFGF+TYS VD
Sbjct: 8 PHQLRKLFIGGLPHEINESQLGCYFSQWGNVIDACVLRDPSTQQSRGFGFVTYSSVFHVD 67
Query: 100 EAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD------------------- 140
AM++RPH I G+ V+TKRA+ RE Q E +
Sbjct: 68 IAMAHRPHYIFGKQVDTKRAISREQMSSAEGSKQFNAEPLPGYKLLLSGIVMRVHCIDFL 127
Query: 141 --YFGQYGTIESVNMVTNKETGAKRGFAFIEFDD 172
YF YG++E V ++ + F+ F D
Sbjct: 128 LRYFNTYGSVEQVEILCSPPPSV----GFVVFKD 157
>gi|189241702|ref|XP_966757.2| PREDICTED: similar to hrp48.1 [Tribolium castaneum]
Length = 400
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 105/198 (53%), Gaps = 17/198 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL + T D+L+ FF ++GE++D VVMK+ + RSRGFGF+T+S+ V+ + N
Sbjct: 16 KLFVGGLSWETTQDNLQRFFSRYGEVIDCVVMKNAESGRSRGFGFVTFSDPANVNTVLQN 75
Query: 105 RPHEIDGRVVETKRAVPREVKVRR---------VTKVQIALEQMD---YFGQYGTIESVN 152
PH +DGR ++ K PR ++ + + + + + D +F ++G + V
Sbjct: 76 GPHTLDGRTIDPKPCNPRTLQKPKKGGGYPKVFLGGLPSNVTETDLRTFFTRFGKVMEVV 135
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ-EVINGEDHRTHGTHQEAKVD 211
++ ++E RGF F+ F+D + VD+ V + V L Q E+ E G ++ D
Sbjct: 136 IMYDQEKKKSRGFGFLSFEDEESVDRCVSEHFVNLNGKQVEIKKAEPRDGSGGNKMGGAD 195
Query: 212 GVTTTNQTHGTIREVVGM 229
+ G + +GM
Sbjct: 196 ----PSSAWGPPQAPMGM 209
>gi|89271354|emb|CAJ83458.1| DAZ associated protein 1 [Xenopus (Silurana) tropicalis]
Length = 347
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 28/163 (17%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQ-------------------------- 138
RPH +DGR ++ K PR ++ R T+ + +Q
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPER-TRPREGWQQKGPRTENSRSNKIFVGGIPHNCGETE 129
Query: 139 -MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 130 LREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 172
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 115 KIFVGGIPHNCGETELREYFKRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 174
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 175 HFHDIMGKKVEVKRAEPRDSK 195
>gi|410348704|gb|JAA40956.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348708|gb|JAA40958.1| DAZ associated protein 1 [Pan troglodytes]
gi|410348710|gb|JAA40959.1| DAZ associated protein 1 [Pan troglodytes]
Length = 427
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKSQ 196
>gi|402081154|gb|EJT76299.1| hypothetical protein GGTG_06219 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 618
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 92/149 (61%), Gaps = 8/149 (5%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SL+ +F Q+GE+++ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 117 KMFIGGLNWETTDQSLREYFSQFGEVIECTVMRDGSTGRSRGFGFLTFKDPKTVNIVMV- 175
Query: 105 RPHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNK 157
+ H +DG++++ KRA+PR+ + V V++ E D+F Q+G + ++ +K
Sbjct: 176 KEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQDTTDQEFKDFFAQFGRVVDATLMMDK 235
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVV 186
+TG RGF F+ F+ VD + ++ +
Sbjct: 236 DTGRPRGFGFVTFESEAGVDACLAQELEI 264
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D K FF Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 195 EQEKTSKIFVGGVSQDTTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 254
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D ++ EI G+ +E K+A PR
Sbjct: 255 DACLAQE-LEIHGKPIEVKKAQPR 277
>gi|45360449|ref|NP_988923.1| heterogeneous nuclear ribonucleoprotein A0 [Xenopus (Silurana)
tropicalis]
gi|38181654|gb|AAH59760.1| heterogeneous nuclear ribonucleoprotein A0 [Xenopus (Silurana)
tropicalis]
Length = 309
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 92/154 (59%), Gaps = 13/154 (8%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
L KLFIGGL+ +T ++ L+ FE +G++ D VV+ +P TKRSR FGF+TYS + D A+
Sbjct: 11 LCKLFIGGLNVQTTEEGLRQHFETYGQLTDCVVVINPQTKRSRCFGFVTYSSAAEADAAV 70
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ-------MDYFGQYGTIE 149
PH +DG VE KRAV RE + ++ L++ +++F Q+G +E
Sbjct: 71 EASPHVVDGNNVELKRAVSREDSAKPGAHAKVKKLFVGGLKEDVGESDLLEHFAQFGAVE 130
Query: 150 SVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
V ++ +K +G KRGF F+ F ++D DK + K
Sbjct: 131 KVEIIADKVSGKKRGFGFVYFTNHDSADKAAVVK 164
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
++KLF+GGL + L F Q+G + V ++ D V+ + RGFGF+ ++ D+A
Sbjct: 102 VKKLFVGGLKEDVGESDLLEHFAQFGAVEKVEIIADKVSGKKRGFGFVYFTNHDSADKAA 161
Query: 103 SNRPHEIDGRVVETKRAVPRE 123
+ H I+G VE K+AVP+E
Sbjct: 162 VVKFHSINGHRVEVKKAVPKE 182
>gi|148223810|ref|NP_001082088.1| DAZ-associated protein 1 [Xenopus laevis]
gi|44887870|sp|Q98SJ2.1|DAZP1_XENLA RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1; AltName:
Full=Proline-rich Vg1 mRNA-binding protein
gi|13488613|gb|AAK26172.1| proline-rich Vg1 mRNA-binding protein [Xenopus laevis]
Length = 360
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 28/163 (17%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD------------------------ 140
RPH +DGR ++ K PR ++ R ++ + +Q +
Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPER-SRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETE 129
Query: 141 ---YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 130 LKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 172
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 29 NKAMEDSQCSEP--ESLR--KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
++ E Q EP E+ R K+F+GG+ + + LK +F ++G + +VV++ D +R
Sbjct: 95 SRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRP 154
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR 127
RGFGFIT+ + + VD+A++ H+I G+ VE KRA PR+ K +
Sbjct: 155 RGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQ 197
>gi|432101161|gb|ELK29445.1| DAZ-associated protein 1 [Myotis davidii]
Length = 435
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 30/195 (15%)
Query: 15 LEVAGTVVPLAMIINKAMEDSQCSEPESLR----KLFIGGLDYRTNDDSLKAFFEQWGEI 70
L G VP+ ++ ED + +R KLF+GGLD+ T ++L+++F Q+GE+
Sbjct: 7 LGAPGAPVPV-FVLEYRNEDLEGFAAPPVRAQTWKLFVGGLDWSTTQETLRSYFSQYGEV 65
Query: 71 VDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRV- 129
VD V+MKD T +SRGFGF+ + + V +++RPH +DGR ++ K PR ++ R
Sbjct: 66 VDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTR 125
Query: 130 ----------------TKVQIA--------LEQMDYFGQYGTIESVNMVTNKETGAKRGF 165
K+ + E +YF ++G + V M+ + E RGF
Sbjct: 126 PKEGWQKGPRNDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGF 185
Query: 166 AFIEFDDYDVVDKIV 180
FI F+D VD+ V
Sbjct: 186 GFITFEDEQSVDQAV 200
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 143 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 202
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 203 HFHDIMGKKVEVKRAEPRDSK 223
>gi|345108301|emb|CBZ41969.1| deleted in azoospermia (Daz)-associated protein 1 [Botryllus
schlosseri]
Length = 333
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 88/160 (55%), Gaps = 17/160 (10%)
Query: 38 SEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKM 97
SE + + K+F+GGL T DD L+ F +GEIV+ +VM+D +T+ SRGFGF+ Y+++
Sbjct: 2 SEGDEVGKIFVGGLTRETTDDMLRQHFSNYGEIVECIVMRDKLTQMSRGFGFVKYADAGA 61
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTK---------------VQIALEQ--MD 140
V E + NRPH +D + ++ K P+ ++ ++ Q A E+
Sbjct: 62 VAEVLKNRPHTLDNKKIDPKPCTPKTIQQQKKNAQIEHTQTHKIFIGGLAQNATEEEVKA 121
Query: 141 YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
YF QYG++ V V NKE +GF F+ F+ VD+ V
Sbjct: 122 YFSQYGSVTEVVFVINKEENRHKGFGFVTFESESAVDQAV 161
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++ +KA+F Q+G + +VV + + R +GFGF+T+ VD+A+
Sbjct: 104 KIFIGGLAQNATEEEVKAYFSQYGSVTEVVFVINKEENRHKGFGFVTFESESAVDQAVGK 163
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
HEI G+ VE KRA PRE R
Sbjct: 164 HFHEICGKRVEAKRATPRETMRR 186
>gi|194212385|ref|XP_001498686.2| PREDICTED: DAZ-associated protein 1-like [Equus caballus]
Length = 608
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 25/161 (15%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 213 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 272
Query: 105 RPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA--------LEQM 139
RPH +DGR ++ K PR ++ R K+ + E
Sbjct: 273 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 332
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 333 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 373
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 316 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 375
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 376 HFHDIMGKKVEVKRAEPRDSK 396
>gi|410348706|gb|JAA40957.1| DAZ associated protein 1 [Pan troglodytes]
Length = 426
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSK 194
>gi|301753349|ref|XP_002912535.1| PREDICTED: hypothetical protein LOC100472152 [Ailuropoda
melanoleuca]
Length = 642
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 385 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 444
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 445 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 503
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 504 NKTNKRRGFCFITFKEEEPVKKIMEKK 530
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 466 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 525
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 526 IMEKKYHNVGLSKCEIKVAMSKE 548
>gi|119626277|gb|EAX05872.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_a [Homo sapiens]
Length = 377
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|224087811|ref|XP_002194831.1| PREDICTED: DAZ-associated protein 1 [Taeniopygia guttata]
Length = 410
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 25/163 (15%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 11 FEKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 70
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA--------LE 137
++RPH +DGR ++ K PR ++ R K+ + E
Sbjct: 71 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETE 130
Query: 138 QMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 131 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 173
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 116 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 175
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 176 HFHDIMGKKVEVKRAEPRDSKSQ 198
>gi|426230983|ref|XP_004009536.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Ovis
aries]
Length = 396
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 25/161 (15%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 6 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 65
Query: 105 RPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA--------LEQM 139
RPH +DGR ++ K PR ++ R K+ + E
Sbjct: 66 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 125
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 126 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 166
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 109 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 168
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 169 HFHDIMGKKVEVKRAEPRDSKSQ 191
>gi|310792726|gb|EFQ28187.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 445
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 8/139 (5%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMV-K 59
Query: 106 PHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNKE 158
H +DG++++ KRA+PR+ + V V++ E DYF Q+G + ++ +K+
Sbjct: 60 EHFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKD 119
Query: 159 TGAKRGFAFIEFDDYDVVD 177
TG RGF F+ F+ VD
Sbjct: 120 TGRPRGFGFVTFESEAGVD 138
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D K +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D +S EI G+ +E K+A PR
Sbjct: 138 DACLSTS-LEIHGKPIEVKKAQPR 160
>gi|8895708|gb|AAF81071.1|AF225910_1 DAZ-associated protein 1 [Mus musculus]
Length = 405
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 24/164 (14%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV----------------TKVQIA--------L 136
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGET 126
Query: 137 EQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 170
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 113 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 172
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 173 HFHDIMGKKVEVKRAEPRDSK 193
>gi|431916163|gb|ELK16415.1| Heterogeneous nuclear ribonucleoprotein D0 [Pteropus alecto]
Length = 334
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 197
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 198 NKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|148907387|gb|ABR16827.1| unknown [Picea sitchensis]
Length = 432
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 92/158 (58%), Gaps = 22/158 (13%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGG+ + T +++LK +F+ +G++V+ V+M+D +T R+RGFGFI +SE VD + +
Sbjct: 7 KVFIGGISWETTEETLKEYFKVYGDVVETVIMRDKMTGRARGFGFIGFSEPTAVDRVLQD 66
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTK------------------VQIALEQMD---YFG 143
+ H IDGR VE KRAVPRE R K + + + D YF
Sbjct: 67 K-HTIDGRQVELKRAVPREEHQRNAQKSGSNVGAGPRTKKIFVGGLAPTVTEDDFKGYFE 125
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
Q+GTI V ++ + + RGF FI FD + VDK+V+
Sbjct: 126 QFGTITDVVVMYDHISQRPRGFGFITFDSEEAVDKVVM 163
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 55/81 (67%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL +D K +FEQ+G I DVVVM D +++R RGFGFIT+ + VD+ +
Sbjct: 104 KKIFVGGLAPTVTEDDFKGYFEQFGTITDVVVMYDHISQRPRGFGFITFDSEEAVDKVVM 163
Query: 104 NRPHEIDGRVVETKRAVPREV 124
HE+ + VE KRA+P+E+
Sbjct: 164 KNFHELHDKTVEVKRALPKEM 184
>gi|301776334|ref|XP_002923590.1| PREDICTED: DAZ-associated protein 1-like [Ailuropoda melanoleuca]
Length = 441
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 25/161 (15%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGLD+ T ++L+ +F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 45 KLFVGGLDWSTTQETLRGYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 104
Query: 105 RPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA--------LEQM 139
RPH +DGR ++ K PR ++ R K+ + E
Sbjct: 105 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 164
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 165 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 205
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 148 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 207
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 208 HFHDIMGKKVEVKRAEPRDSK 228
>gi|71894833|ref|NP_001026599.1| DAZ-associated protein 1 [Gallus gallus]
gi|53127644|emb|CAG31151.1| hypothetical protein RCJMB04_2n4 [Gallus gallus]
Length = 409
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 8 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 67
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 68 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGE 127
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 128 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 172
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 115 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 174
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 175 HFHDIMGKKVEVKRAEPRDSKSQ 197
>gi|169790823|ref|NP_001116077.1| DAZ-associated protein 1 isoform c [Mus musculus]
gi|74195100|dbj|BAE28294.1| unnamed protein product [Mus musculus]
gi|148699626|gb|EDL31573.1| DAZ associated protein 1, isoform CRA_b [Mus musculus]
Length = 406
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 24/164 (14%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV----------------TKVQIA--------L 136
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGET 126
Query: 137 EQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 170
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 113 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 172
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 173 HFHDIMGKKVEVKRAEPRDSK 193
>gi|148699625|gb|EDL31572.1| DAZ associated protein 1, isoform CRA_a [Mus musculus]
gi|149034565|gb|EDL89302.1| DAZ associated protein 1, isoform CRA_b [Rattus norvegicus]
Length = 397
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 24/162 (14%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
+ KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +
Sbjct: 1 MGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVL 60
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRRV----------------TKVQIA--------LEQ 138
++RPH +DGR ++ K PR ++ R K+ + E
Sbjct: 61 ASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGETEL 120
Query: 139 MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 121 REYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 162
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 105 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 164
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 165 HFHDIMGKKVEVKRAEPRDSK 185
>gi|430813105|emb|CCJ29521.1| unnamed protein product [Pneumocystis jirovecii]
Length = 397
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 89/153 (58%), Gaps = 8/153 (5%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D+SL+A+FEQ+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDESLRAYFEQFGEVTECNVMRDSSTGRSRGFGFLTFKDPKCVNTVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKVQIALEQ-------MDYFGQYGTIESVNMVTNKE 158
H +DG++++ KRA+PRE + + + Q ++F +G + ++ +K+
Sbjct: 61 -HYLDGKIIDPKRAIPREEQEKTAKMFVGGVSQDCTEDEFREFFSAFGRVIDATLMIDKD 119
Query: 159 TGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
TG RGF F+ F+ V+ + + + Q
Sbjct: 120 TGRPRGFGFVTFESDAAVENAMSQPYLAIHDKQ 152
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ +D + FF +G ++D +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTAKMFVGGVSQDCTEDEFREFFSAFGRVIDATLMIDKDTGRPRGFGFVTFESDAAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR-EVKVRRVTK 131
+ AMS I + +E KRA P+ +K R TK
Sbjct: 138 ENAMSQPYLAIHDKQIEVKRATPKGNIKERVNTK 171
>gi|328724866|ref|XP_003248272.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Acyrthosiphon pisum]
Length = 432
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 93/159 (58%), Gaps = 12/159 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL + T +SL+ +F ++GE++D VVMK+ + RSRGFGF+T+++ V+ + N
Sbjct: 14 KLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQN 73
Query: 105 RPHEIDGRVVETKRAVPREV-KVRRVTK--------VQIALEQMD---YFGQYGTIESVN 152
PH +DGR ++ K PR + K +R + + + + D +F +YG + V
Sbjct: 74 GPHVLDGRTIDPKPCNPRTLQKPKRSSSYPKVFLGGLPSNVTETDLRTFFSRYGKVMEVV 133
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
++ ++E RGF F+ F+D D VD+ V + V L Q
Sbjct: 134 IMYDQEKKKSRGFGFLSFEDDDAVDRCVAEHFVNLSGKQ 172
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S K+F+GGL + L+ FF ++G++++VV+M D K+SRGFGF+++ + VD
Sbjct: 101 SYPKVFLGGLPSNVTETDLRTFFSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRC 160
Query: 102 MSNRPHEIDGRVVETKRAVPREV-KVRRVTKVQIALEQMDYF 142
++ + G+ VE K+A PR+ K+ V Q + Q ++
Sbjct: 161 VAEHFVNLSGKQVEIKKAEPRDSNKMNDVGANQWGMNQNNHL 202
>gi|322798126|gb|EFZ19965.1| hypothetical protein SINV_80273 [Solenopsis invicta]
Length = 370
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 90/160 (56%), Gaps = 25/160 (15%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVT---------------KRSRGFGF 89
KLF+GGL ++T+ + L+ +F +G + DV++MKDP+T +RSRGFGF
Sbjct: 41 KLFVGGLSWQTSSEKLREYFSMFGTVTDVLIMKDPMTQTVLVHRAGSRLVRLQRSRGFGF 100
Query: 90 ITYSESKMVDEAMSNRPHEIDGRVVETKRAVP--REVKVRRVTKVQIALEQMD------- 140
IT++E VD+ + H +DG+ ++ K A P R + R K+ + D
Sbjct: 101 ITFAEPGSVDKVLKCPIHTLDGKKIDPKHATPKNRAKQANRTKKIFVGGVSQDTSSDEVK 160
Query: 141 -YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
YF Q+G +E M+ +++T RGF F+ F++ DVVD++
Sbjct: 161 AYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDVVDRV 200
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
A ++ + +K+F+GG+ T+ D +KA+F Q+G++ + V++ D TKR RGFGF+
Sbjct: 130 ATPKNRAKQANRTKKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFV 189
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV 124
T+ +VD H I + VE K+A P+E
Sbjct: 190 TFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEA 223
>gi|196004432|ref|XP_002112083.1| hypothetical protein TRIADDRAFT_63876 [Trichoplax adhaerens]
gi|190585982|gb|EDV26050.1| hypothetical protein TRIADDRAFT_63876 [Trichoplax adhaerens]
Length = 331
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 93/160 (58%), Gaps = 13/160 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T ++ L+ +F ++G IV + DP+T RSRGF F+T++ VD+ + +
Sbjct: 74 KMFIGGLNWETTEEGLQKYFSKFGTIVSSTIKNDPITHRSRGFAFVTFANPADVDKVLES 133
Query: 105 RPHEIDGRVVETKRAVP--REVKVR---RVTKVQIA--------LEQMDYFGQYGTIESV 151
PH++D R V+ KRA+P ++++++ R K+ I ++F ++G I V
Sbjct: 134 GPHQLDNRTVDPKRALPLHKQIQLKGQHRTKKIFIGGLGAEHTESSLKEFFSEFGNILDV 193
Query: 152 NMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
VT+K T +RGF F+ FD + VDK + V+ Q
Sbjct: 194 EFVTDKLTRKRRGFCFLSFDTEEAVDKACEKQFHVVSGRQ 233
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 53/84 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+FIGGL + SLK FF ++G I+DV + D +T++ RGF F+++ + VD+A
Sbjct: 164 KKIFIGGLGAEHTESSLKEFFSEFGNILDVEFVTDKLTRKRRGFCFLSFDTEEAVDKACE 223
Query: 104 NRPHEIDGRVVETKRAVPREVKVR 127
+ H + GR VE KRA P++ R
Sbjct: 224 KQFHVVSGRQVEIKRATPKDQASR 247
>gi|71043670|ref|NP_001020913.1| DAZ-associated protein 1 [Rattus norvegicus]
gi|169790818|ref|NP_573451.2| DAZ-associated protein 1 isoform a [Mus musculus]
gi|68534156|gb|AAH98930.1| DAZ associated protein 1 [Rattus norvegicus]
gi|148699628|gb|EDL31575.1| DAZ associated protein 1, isoform CRA_d [Mus musculus]
gi|149034564|gb|EDL89301.1| DAZ associated protein 1, isoform CRA_a [Rattus norvegicus]
Length = 405
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 24/164 (14%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV----------------TKVQIA--------L 136
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGET 126
Query: 137 EQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 170
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 113 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 172
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 173 HFHDIMGKKVEVKRAEPRDSK 193
>gi|71896513|ref|NP_001025523.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Xenopus (Silurana)
tropicalis]
gi|52355236|gb|AAU44811.1| AUF1 [Xenopus (Silurana) tropicalis]
Length = 295
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 39 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDKVMEQ 98
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G IE++ + +
Sbjct: 99 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGTFGEIEAIELPMD 157
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + D V KI+ K
Sbjct: 158 NKTNKRRGFCFITFKEEDPVKKIMEKK 184
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GEI + + D T + RGF FIT+ E V +
Sbjct: 120 EPVKKIFVGGLSPDTPEEKIREYFGTFGEIEAIELPMDNKTNKRRGFCFITFKEEDPVKK 179
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 180 IMEKKYHNVGLSKCEIKVALSKE 202
>gi|119589908|gb|EAW69502.1| DAZ associated protein 1, isoform CRA_b [Homo sapiens]
Length = 405
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 24/164 (14%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV----------------TKVQIA--------L 136
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWKGPRSDNSKSNKIFVGGIPHNCGET 126
Query: 137 EQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 170
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 113 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 172
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 173 HFHDIMGKKVEVKRAEPRDSKSQ 195
>gi|449499935|ref|XP_004175398.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Taeniopygia
guttata]
Length = 340
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 61 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 120
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 121 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 179
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 180 NKTNKRRGFCFITFKEEEPVKKIMEKK 206
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 142 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 201
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 202 IMEKKYHNVGLSKCEIKVAMSKE 224
>gi|340515592|gb|EGR45845.1| predicted protein [Trichoderma reesei QM6a]
Length = 515
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 94/157 (59%), Gaps = 11/157 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SL+ +F Q+GE+V+ VM+D + RSRGFGF+T+ + K V+ M
Sbjct: 113 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDPKTVNIVMVK 172
Query: 105 RPHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + V V++ E +YF Q+G + ++ +K
Sbjct: 173 E-HFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDK 231
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
+TG RGF F+ F+ VD + V LE+ + I
Sbjct: 232 DTGRPRGFGFVTFESEAGVDACI---NVPLEIHGKPI 265
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 191 EQEKTSKIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 250
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D A N P EI G+ +E K+A PR
Sbjct: 251 D-ACINVPLEIHGKPIEVKKAQPR 273
>gi|50604140|gb|AAH77252.1| LOC398218 protein [Xenopus laevis]
Length = 405
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 90/167 (53%), Gaps = 28/167 (16%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD-------------------- 140
+++RPH +DGR ++ K PR ++ R ++ + +Q +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPER-SRPREGWQQKEPRTENSRSNKIFVGGIPHNC 125
Query: 141 -------YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 126 GETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 172
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 65/103 (63%), Gaps = 4/103 (3%)
Query: 29 NKAMEDSQCSEP--ESLR--KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRS 84
++ E Q EP E+ R K+F+GG+ + + LK +F ++G + +VV++ D +R
Sbjct: 95 SRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRP 154
Query: 85 RGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR 127
RGFGFIT+ + + VD+A++ H+I G+ VE KRA PR+ K +
Sbjct: 155 RGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQ 197
>gi|336263120|ref|XP_003346341.1| hypothetical protein SMAC_07818 [Sordaria macrospora k-hell]
gi|380091669|emb|CCC10801.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 532
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 86/139 (61%), Gaps = 8/139 (5%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQYGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNVVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNKE 158
H +DG++++ KRA+PR+ + V V++ E +YF Q+G + ++ +K+
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKD 119
Query: 159 TGAKRGFAFIEFDDYDVVD 177
TG RGF F+ F+ VD
Sbjct: 120 TGRPRGFGFVTFESEAGVD 138
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D +S EI G+ +E K+A PR
Sbjct: 138 DACLSAN-LEIHGKPIEVKKAQPR 160
>gi|328724864|ref|XP_001951157.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Acyrthosiphon pisum]
Length = 442
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 93/159 (58%), Gaps = 12/159 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL + T +SL+ +F ++GE++D VVMK+ + RSRGFGF+T+++ V+ + N
Sbjct: 14 KLFVGGLSWETQQESLQRYFNRYGEVIDCVVMKNSESGRSRGFGFVTFADPNNVNVVLQN 73
Query: 105 RPHEIDGRVVETKRAVPREV-KVRRVTK--------VQIALEQMD---YFGQYGTIESVN 152
PH +DGR ++ K PR + K +R + + + + D +F +YG + V
Sbjct: 74 GPHVLDGRTIDPKPCNPRTLQKPKRSSSYPKVFLGGLPSNVTETDLRTFFSRYGKVMEVV 133
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
++ ++E RGF F+ F+D D VD+ V + V L Q
Sbjct: 134 IMYDQEKKKSRGFGFLSFEDDDAVDRCVAEHFVNLSGKQ 172
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
S K+F+GGL + L+ FF ++G++++VV+M D K+SRGFGF+++ + VD
Sbjct: 101 SYPKVFLGGLPSNVTETDLRTFFSRYGKVMEVVIMYDQEKKKSRGFGFLSFEDDDAVDRC 160
Query: 102 MSNRPHEIDGRVVETKRAVPREV-KVRRVTKVQIALEQMDYF 142
++ + G+ VE K+A PR+ K+ V Q + Q ++
Sbjct: 161 VAEHFVNLSGKQVEIKKAEPRDSNKMNDVGANQWGMNQNNHL 202
>gi|171451952|dbj|BAG15904.1| musashi [Dugesia japonica]
Length = 463
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 40/180 (22%)
Query: 37 CSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESK 96
C++P K+FIGGL T+ ++++ +F ++G+I + ++M+DPVTKRSRGFGF+T+ ES
Sbjct: 24 CNDP---GKMFIGGLSPTTSPETMRDYFRKYGDIKEFMIMRDPVTKRSRGFGFVTFFESS 80
Query: 97 MVDEAMSNRPHEIDGRVVETKRAVPREVKVR----------------------------- 127
V + ++ PH +D + ++ K AVPR+V+
Sbjct: 81 SVKKVLNKTPHILDSKKIDPKVAVPRKVETSTKNCESSLDCIGINGYSTGKLGDSNMIST 140
Query: 128 RVTKVQIA--------LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
+ KV I E +YF Q+G +E+ ++ +K T RGF F+ F++ D +K+
Sbjct: 141 KTKKVFIGGISTNTTKQELEEYFSQFGILETCELMMDKATSRHRGFGFVTFENEDTAEKV 200
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+FIGG+ T L+ +F Q+G + +M D T R RGFGF+T+ ++
Sbjct: 143 KKVFIGGISTNTTKQELEEYFSQFGILETCELMMDKATSRHRGFGFVTFENEDTAEKVCD 202
Query: 104 NRPHEIDGRVVETKRAVPREV 124
H+++ + VE K+A+P+E+
Sbjct: 203 IHFHDLNNKTVEAKKALPKEI 223
>gi|291233795|ref|XP_002736841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein at 27C-like
[Saccoglossus kowalevskii]
Length = 540
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 90/156 (57%), Gaps = 17/156 (10%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E + K+F+GGL + + DSL+ F ++GE++D V+MKDP+T+RSRGFGF+ + + V
Sbjct: 5 EEIGKIFVGGLSWESTQDSLQKHFMKYGEVIDCVIMKDPITQRSRGFGFVKFKDPVCVQT 64
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVR---------RVTKVQIAL--------EQMDYFG 143
A++ PH +DGR ++ K PR + + RV KV I + ++F
Sbjct: 65 ALAGAPHILDGRTIDPKPCTPRSQQQKTQQMGQFSGRVKKVFIGGIPPNCNEDDINNFFS 124
Query: 144 QYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
Q+G + M+ +++ RGF F+ F+ D+V+K+
Sbjct: 125 QFGQVTEFIMMYDQQQKRPRGFGFLSFESEDIVEKV 160
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 56/84 (66%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
++K+FIGG+ N+D + FF Q+G++ + ++M D KR RGFGF+++ +V++
Sbjct: 102 VKKVFIGGIPPNCNEDDINNFFSQFGQVTEFIMMYDQQQKRPRGFGFLSFESEDIVEKVC 161
Query: 103 SNRPHEIDGRVVETKRAVPREVKV 126
+ R H I+G+ VE K+A PR+V+
Sbjct: 162 TIRYHTINGKTVECKKAEPRDVRT 185
>gi|389623913|ref|XP_003709610.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
gi|351649139|gb|EHA56998.1| hypothetical protein MGG_06881 [Magnaporthe oryzae 70-15]
Length = 568
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 87/134 (64%), Gaps = 8/134 (5%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D+SL+ +F Q+GE+++ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 120 KMFIGGLNWETTDESLRDYFSQFGEVIECTVMRDGTTGRSRGFGFLTFKDPKTVNIVMV- 178
Query: 105 RPHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNK 157
+ H +DG++++ KRA+PR+ + V V++ E D+F Q+G + ++ +K
Sbjct: 179 KEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKDFFAQFGRVVDATLMMDK 238
Query: 158 ETGAKRGFAFIEFD 171
+TG RGF F+ F+
Sbjct: 239 DTGRPRGFGFVTFE 252
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D K FF Q+G +VD +M D T R RGFGF+T+ ES+
Sbjct: 198 EQEKTSKIFVGGVSQETTDQEFKDFFAQFGRVVDATLMMDKDTGRPRGFGFVTF-ESEAG 256
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
EA R EI G+++E K+A PR
Sbjct: 257 VEACLARDLEIHGKLIEVKKAQPR 280
>gi|348550391|ref|XP_003461015.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1-like
[Cavia porcellus]
Length = 406
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKSQ 196
>gi|297275666|ref|XP_001094635.2| PREDICTED: DAZ-associated protein 1 isoform 1 [Macaca mulatta]
Length = 407
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI-------------------------A 135
+++RPH +DGR ++ K PR ++ R +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTPPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKSQ 196
>gi|346326836|gb|EGX96432.1| RNA recognition protein, RNP-1 [Cordyceps militaris CM01]
Length = 525
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 95/157 (60%), Gaps = 11/157 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ ++K V+ M
Sbjct: 116 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVNIVMVK 175
Query: 105 RPHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + V V++ E ++F Q+G + ++ +K
Sbjct: 176 E-HYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQDTTDQEFREFFAQFGRVIDATLMMDK 234
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
+TG RGF F+ F+ VD + + LE+ + I
Sbjct: 235 DTGRPRGFGFVTFESEAGVDACI---NIPLEIHGKPI 268
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D + FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 194 EQEKTSKIFVGGVSQDTTDQEFREFFAQFGRVIDATLMMDKDTGRPRGFGFVTFESEAGV 253
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D A N P EI G+ +E KRA PR
Sbjct: 254 D-ACINIPLEIHGKPIEVKRAQPR 276
>gi|3377279|dbj|BAA32032.1| AlF-C1 [Rattus norvegicus]
Length = 331
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 100/182 (54%), Gaps = 12/182 (6%)
Query: 12 VPGLEVAGTVVPLAMIINKAMED--SQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGE 69
P V GT + N A D + E K+F+GGL + T+ LK +F ++GE
Sbjct: 40 TPAGSVGGTTAAPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDYFTKFGE 99
Query: 70 IVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRV 129
+VD + DP T RSRGFGFI + +S V++ + + H +DGRV++ K+A+ +K V
Sbjct: 100 VVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQKEHRLDGRVIDPKKAM--AMKKDPV 157
Query: 130 TKVQI------ALEQ--MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
K+ + A E+ +YFGQ+G IE++ + + + +RGF FI F + D V K++
Sbjct: 158 KKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLE 217
Query: 182 DK 183
K
Sbjct: 218 KK 219
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ ++K+F+GGL+ ++ ++ +F Q+GEI + + DP + RGF FIT+ E V +
Sbjct: 155 DPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 214
Query: 101 AMSNRPHEIDGRVVETKRAVPREV 124
+ + H + G E K A P+EV
Sbjct: 215 VLEKKFHTVSGSKCEIKVAQPKEV 238
>gi|347300255|ref|NP_001231435.1| DAZ-associated protein 1 [Sus scrofa]
Length = 406
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKSQ 196
>gi|440910410|gb|ELR60208.1| DAZ-associated protein 1, partial [Bos grunniens mutus]
Length = 386
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 25/161 (15%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 105 RPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA--------LEQM 139
RPH +DGR ++ K PR ++ R K+ + E
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 120
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 121 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 161
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 104 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 163
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 164 HFHDIMGKKVEVKRAEPRDSK 184
>gi|395831307|ref|XP_003788744.1| PREDICTED: DAZ-associated protein 1 [Otolemur garnettii]
Length = 407
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKSQ 196
>gi|300795706|ref|NP_001179960.1| DAZ-associated protein 1 [Bos taurus]
Length = 406
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKSQ 196
>gi|426386459|ref|XP_004059702.1| PREDICTED: DAZ-associated protein 1 [Gorilla gorilla gorilla]
Length = 407
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKSQ 196
>gi|367038869|ref|XP_003649815.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
gi|346997076|gb|AEO63479.1| hypothetical protein THITE_2108809 [Thielavia terrestris NRRL 8126]
Length = 606
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 86/134 (64%), Gaps = 8/134 (5%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 123 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMV- 181
Query: 105 RPHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNK 157
+ H +DG++++ KRA+PR+ + V V++ E +YF Q+G + ++ +K
Sbjct: 182 KEHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDK 241
Query: 158 ETGAKRGFAFIEFD 171
+TG RGF F+ F+
Sbjct: 242 DTGRPRGFGFVTFE 255
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 201 EQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 260
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ ++ + EI G+ +E K+A PR
Sbjct: 261 EACLAAK-LEIHGKPIEVKKAQPR 283
>gi|345786818|ref|XP_003432858.1| PREDICTED: DAZ-associated protein 1 [Canis lupus familiaris]
Length = 407
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKSQ 196
>gi|344307817|ref|XP_003422575.1| PREDICTED: DAZ-associated protein 1 [Loxodonta africana]
Length = 407
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKSQ 196
>gi|8671754|gb|AAF78364.1|AF181719_1 DAZ associated protein 1 [Homo sapiens]
Length = 407
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDYSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKSQ 196
>gi|260791472|ref|XP_002590753.1| hypothetical protein BRAFLDRAFT_218784 [Branchiostoma floridae]
gi|229275949|gb|EEN46764.1| hypothetical protein BRAFLDRAFT_218784 [Branchiostoma floridae]
Length = 137
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 83/131 (63%), Gaps = 11/131 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T DSL+ +F ++GEI + +VMKDPVT+RSRGFGF+T+ + VD+ ++
Sbjct: 1 KMFIGGLSWQTTADSLREYFCKYGEIKECMVMKDPVTRRSRGFGFVTFRDPASVDKVLAV 60
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ----------IALEQM-DYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + LE + +YFG YG IE +
Sbjct: 61 SKHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVLEDVKNYFGHYGKIEDAML 120
Query: 154 VTNKETGAKRG 164
+ +K+T RG
Sbjct: 121 MFDKQTNRHRG 131
>gi|168003443|ref|XP_001754422.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168003449|ref|XP_001754425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694524|gb|EDQ80872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694527|gb|EDQ80875.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 177
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 100/178 (56%), Gaps = 21/178 (11%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T+ D+L++ F+++GEI+D V+MKD T RGFGF+T+++ + D + +
Sbjct: 2 KIFIGGLSWDTSTDNLQSHFKKYGEIIDAVIMKDRSTGHPRGFGFVTFADPAVCDNVVLD 61
Query: 105 RPHEIDGRVVETKRAVPRE----VKVRRVTKVQIA--------LEQMDYFGQYGTIESVN 152
+ H IDGR VE K++VPRE K + K+ + E YFG +G++
Sbjct: 62 K-HVIDGRTVEAKKSVPRENMAASKGPKTKKIFVGGIPPSITDEEFKSYFGGFGSVVEHQ 120
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKIV-------LDKVVVLEVDQEVINGEDHRTHG 203
++ + TG RGF F+ FD+ VV+ I+ L V + D +G HR HG
Sbjct: 121 IMQDHSTGRSRGFGFVTFDNEQVVEDILAHGKMHELGGKQVSQCDWHSSSGY-HRRHG 177
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 33 EDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITY 92
E+ S+ +K+F+GG+ D+ K++F +G +V+ +M+D T RSRGFGF+T+
Sbjct: 79 ENMAASKGPKTKKIFVGGIPPSITDEEFKSYFGGFGSVVEHQIMQDHSTGRSRGFGFVTF 138
Query: 93 SESKMVDEAMSN-RPHEIDGRVV 114
++V++ +++ + HE+ G+ V
Sbjct: 139 DNEQVVEDILAHGKMHELGGKQV 161
>gi|417400375|gb|JAA47137.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 406
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDNSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKSQ 196
>gi|296232416|ref|XP_002761578.1| PREDICTED: DAZ-associated protein 1 [Callithrix jacchus]
Length = 407
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKSQ 196
>gi|402879932|ref|XP_003903574.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like, partial [Papio anubis]
Length = 152
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 78/123 (63%), Gaps = 17/123 (13%)
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA 135
M+DP TKRSR FGF+TY+ + VD AM+ RPH++DGR VETKR + R R +A
Sbjct: 1 MRDPNTKRSRSFGFVTYATVEEVDTAMNARPHKVDGRAVETKRTISRGNSQR--PGAHLA 58
Query: 136 LEQM---------------DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
++++ D F QYG +E + ++T++ +G KRGFAF+ FDD+D VDKIV
Sbjct: 59 VKKIFVGGIKEDTEEHHLRDNFEQYGKMEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 118
Query: 181 LDK 183
+ K
Sbjct: 119 IQK 121
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 51/82 (62%)
Query: 42 SLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEA 101
+++K+F+GG+ T + L+ FEQ+G++ + +M D + + RGF F+T+ + VD+
Sbjct: 58 AVKKIFVGGIKEDTEEHHLRDNFEQYGKMEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 117
Query: 102 MSNRPHEIDGRVVETKRAVPRE 123
+ + H ++G E ++A+ ++
Sbjct: 118 VIQKYHTVNGHNCEVRKALSKQ 139
>gi|169790820|ref|NP_001116076.1| DAZ-associated protein 1 isoform b [Mus musculus]
gi|44887872|sp|Q9JII5.2|DAZP1_MOUSE RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|37572288|gb|AAH49355.1| DAZ associated protein 1 [Mus musculus]
gi|148699627|gb|EDL31574.1| DAZ associated protein 1, isoform CRA_c [Mus musculus]
Length = 406
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 56/81 (69%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVK 125
H+I G+ VE KRA PR+ K
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSK 194
>gi|345564567|gb|EGX47528.1| hypothetical protein AOL_s00083g337 [Arthrobotrys oligospora ATCC
24927]
Length = 642
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 92/141 (65%), Gaps = 10/141 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D+SL+ +F Q+GE+ + VM+D + RSRGFGF+T+ + K V+ M
Sbjct: 159 KMFIGGLNWETTDESLRDYFSQFGEVSECTVMRDGPSGRSRGFGFLTFKDPKTVNIVMV- 217
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTN 156
+ H +DG++++ KRA+PR+ + R +K+ Q A E+ ++F Q+G + ++ +
Sbjct: 218 KEHYLDGKIIDPKRAIPRDEQ-ERTSKIFVGGVSQEASEEEFKNFFMQFGRVIDSTLMID 276
Query: 157 KETGAKRGFAFIEFDDYDVVD 177
KETG RGF F+ FD+ VD
Sbjct: 277 KETGRPRGFGFVTFDNEAAVD 297
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ +++ K FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 237 EQERTSKIFVGGVSQEASEEEFKNFFMQFGRVIDSTLMIDKETGRPRGFGFVTFDNEAAV 296
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D A+ + I + +E K+A PR
Sbjct: 297 DLALQHPDLRIRDKPIEVKKAQPR 320
>gi|355702931|gb|EHH29422.1| Deleted in azoospermia-associated protein 1, partial [Macaca
mulatta]
gi|355755280|gb|EHH59027.1| Deleted in azoospermia-associated protein 1, partial [Macaca
fascicularis]
Length = 397
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 87/161 (54%), Gaps = 25/161 (15%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 1 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 60
Query: 105 RPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA--------LEQM 139
RPH +DGR ++ K PR ++ R K+ + E
Sbjct: 61 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELR 120
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 121 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 161
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 104 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 163
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 164 HFHDIMGKKVEVKRAEPRDSKSQ 186
>gi|167518996|ref|XP_001743838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777800|gb|EDQ91416.1| predicted protein [Monosiga brevicollis MX1]
Length = 159
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 87/147 (59%), Gaps = 11/147 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GG+ + TN++SL +F+++G ++D VVM+D VT+RSRGFGF+T+++ K V + +S+
Sbjct: 1 KLFVGGISWNTNEESLTDYFQRYGTVIDAVVMRDSVTQRSRGFGFVTFADPKSVTDVLSS 60
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIAL-----------EQMDYFGQYGTIESVNM 153
PH + R ++ KRA+PR T ++ +YF Q+G IE
Sbjct: 61 GPHVVCDREIDPKRAIPRSSSDPASTTIKKLFLGGLASSMNEDSIKNYFVQFGEIEDALC 120
Query: 154 VTNKETGAKRGFAFIEFDDYDVVDKIV 180
+++TG RGF FI F + + ++
Sbjct: 121 QRDRDTGRPRGFGFITFKTEEAAESVL 147
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 38 SEPES--LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
S+P S ++KLF+GGL N+DS+K +F Q+GEI D + +D T R RGFGFIT+
Sbjct: 81 SDPASTTIKKLFLGGLASSMNEDSIKNYFVQFGEIEDALCQRDRDTGRPRGFGFITFKTE 140
Query: 96 KMVDEAMSNRPHEIDGRVV 114
+ + + + H IDG V
Sbjct: 141 EAAESVLRQQYHTIDGNRV 159
>gi|25470886|ref|NP_061832.2| DAZ-associated protein 1 isoform b [Homo sapiens]
gi|297702955|ref|XP_002828422.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Pongo abelii]
gi|402903559|ref|XP_003914631.1| PREDICTED: DAZ-associated protein 1 isoform 1 [Papio anubis]
gi|44887869|sp|Q96EP5.1|DAZP1_HUMAN RecName: Full=DAZ-associated protein 1; AltName: Full=Deleted in
azoospermia-associated protein 1
gi|15082313|gb|AAH12062.1| DAZ associated protein 1 [Homo sapiens]
gi|119589907|gb|EAW69501.1| DAZ associated protein 1, isoform CRA_a [Homo sapiens]
gi|167774089|gb|ABZ92479.1| DAZ associated protein 1 [synthetic construct]
gi|261859284|dbj|BAI46164.1| DAZ associated protein 1 [synthetic construct]
gi|380811694|gb|AFE77722.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|383417483|gb|AFH31955.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|384942228|gb|AFI34719.1| DAZ-associated protein 1 isoform b [Macaca mulatta]
gi|410225570|gb|JAA10004.1| DAZ associated protein 1 [Pan troglodytes]
gi|410225572|gb|JAA10005.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256494|gb|JAA16214.1| DAZ associated protein 1 [Pan troglodytes]
gi|410256496|gb|JAA16215.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298126|gb|JAA27663.1| DAZ associated protein 1 [Pan troglodytes]
gi|410298128|gb|JAA27664.1| DAZ associated protein 1 [Pan troglodytes]
Length = 407
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 25/165 (15%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA-------- 135
+++RPH +DGR ++ K PR ++ R K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGE 126
Query: 136 LEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 TELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 114 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 173
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 174 HFHDIMGKKVEVKRAEPRDSKSQ 196
>gi|433344|gb|AAC50056.1| p37 AUF1 [Homo sapiens]
Length = 286
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 136
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 137 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 195
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 196 NKTNKRRGFCFITFKEEEPVKKIMEKK 222
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 158 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 217
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 218 IMEKKYHNVGLSKCEIKVAMSKE 240
>gi|357628443|gb|EHJ77777.1| hypothetical protein KGM_04418 [Danaus plexippus]
Length = 414
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 103/178 (57%), Gaps = 18/178 (10%)
Query: 26 MIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSR 85
M +N M+D + KLF+GGL + T+ ++L+ +F ++G+++D VVMK+ + RSR
Sbjct: 1 MRMNPDMDDDEKG------KLFVGGLSWETSQENLQRYFSRYGDVIDCVVMKNSESGRSR 54
Query: 86 GFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV-KVRR--------VTKVQIAL 136
GFGF+T++E +V+ + N PH++DGR ++ K PR + K +R + + +
Sbjct: 55 GFGFVTFAEPSLVNVVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNI 114
Query: 137 EQMD---YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
+ D +FG+YG + V ++ ++E RGF F+ F+D V+++ + + L Q
Sbjct: 115 TETDLRVFFGRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEISVERVTQEHFINLNGKQ 172
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL + L+ FF ++G++++VV+M D K+SRGFGF+++ + V+
Sbjct: 104 KVFLGGLPSNITETDLRVFFGRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEISVERVTQE 163
Query: 105 RPHEIDGRVVETKRAVPRE 123
++G+ VE KRA PR+
Sbjct: 164 HFINLNGKQVEIKRAEPRD 182
>gi|444723247|gb|ELW63906.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Tupaia
chinensis]
Length = 296
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 51 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 110
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 111 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 169
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 170 NKTNKRRGFCFITFKEEEPVKKIMEKK 196
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 132 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 191
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 192 IMEKKYHNVGLSKCEIKVAMSKE 214
>gi|383857431|ref|XP_003704208.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like
[Megachile rotundata]
Length = 443
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 93/159 (58%), Gaps = 12/159 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL + T ++L+ +F ++GE++D VVMK+ + RSRGFGF+T+S+ V + N
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 105 RPHEIDGRVVETKRAVPR-EVKVRR--------VTKVQIALEQMD---YFGQYGTIESVN 152
PH++DGR ++ K PR + K +R + + + + D +F +YG + V
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRTFFNRYGKVMEVV 133
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
++ ++E RGF F+ F+D D VD+ V + V L Q
Sbjct: 134 IMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQ 172
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 53/83 (63%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL + L+ FF ++G++++VV+M D K+SRGFGF+++ + VD ++
Sbjct: 104 KVFLGGLPSNVTETDLRTFFNRYGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
++G+ VE KRA PR+ +
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSSSK 186
>gi|347966814|ref|XP_321133.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|347966816|ref|XP_003435970.1| AGAP001930-PB [Anopheles gambiae str. PEST]
gi|333469887|gb|EAA00972.5| AGAP001930-PA [Anopheles gambiae str. PEST]
gi|333469888|gb|EGK97443.1| AGAP001930-PB [Anopheles gambiae str. PEST]
Length = 412
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 95/159 (59%), Gaps = 12/159 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL + T+ ++L+ +F ++GE++D VVMK+ T RSRGFGF+T+++ + V+ A+ N
Sbjct: 19 KLFVGGLSWETSHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALEN 78
Query: 105 RPHEIDGRVVETKRAVPR-EVKVRR--------VTKVQIALEQMD---YFGQYGTIESVN 152
PH +DGR ++ K PR + K +R + + + + D +F +YGT+ V
Sbjct: 79 GPHTLDGRTIDPKPCNPRSQHKPKRTGGYPKVFLGGLPPNITETDLRSFFCRYGTVMEVV 138
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
++ ++E RGF F+ F++ V++ D V + Q
Sbjct: 139 IMYDQEKKKSRGFGFLSFENESAVERATTDHFVHISGKQ 177
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL + L++FF ++G +++VV+M D K+SRGFGF+++ V+ A ++
Sbjct: 109 KVFLGGLPPNITETDLRSFFCRYGTVMEVVIMYDQEKKKSRGFGFLSFENESAVERATTD 168
Query: 105 RPHEIDGRVVETKRAVPRE 123
I G+ VE K+A PR+
Sbjct: 169 HFVHISGKQVEVKKAEPRD 187
>gi|3747052|gb|AAC77437.1| estrogen response element binding protein [Saguinus oedipus]
Length = 358
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 87/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKGEEPVKKIMEKK 243
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKGEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|326435665|gb|EGD81235.1| RNA-binding protein Musashi-1 [Salpingoeca sp. ATCC 50818]
Length = 1023
Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats.
Identities = 58/158 (36%), Positives = 86/158 (54%), Gaps = 22/158 (13%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL TN D LK +F ++GE+VD VVM D T R+RGFGF+T+ + + + +
Sbjct: 427 KMFVGGLSPETNRDRLKGYFSRFGEVVDCVVMTDATTGRTRGFGFVTFRDGRCCAKVLRE 486
Query: 105 RPHEIDGRVVETKRAVPREV--------------KVRRVTKVQI------ALEQ--MDYF 142
RPH IDGR V+ K AVPRE + R KV + A ++ + +F
Sbjct: 487 RPHIIDGREVDPKMAVPREQMEQHSRSSSAPAAPRGRSARKVFVGGLPSNATDEALIGFF 546
Query: 143 GQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+G IE ++ +K+T RGF F+ F V + +V
Sbjct: 547 SNFGEIEEAVVIHDKQTRLPRGFGFVTFVSEQVAEHVV 584
Score = 74.7 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 3/121 (2%)
Query: 11 LVPGLEV-AGTVVPLAMIINKAMEDSQCSEPE--SLRKLFIGGLDYRTNDDSLKAFFEQW 67
++ G EV VP + + S + P S RK+F+GGL D++L FF +
Sbjct: 490 IIDGREVDPKMAVPREQMEQHSRSSSAPAAPRGRSARKVFVGGLPSNATDEALIGFFSNF 549
Query: 68 GEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVR 127
GEI + VV+ D T+ RGFGF+T+ ++ + +S H++ G++VE KRA P+
Sbjct: 550 GEIEEAVVIHDKQTRLPRGFGFVTFVSEQVAEHVVSLHYHDLLGKMVEVKRAEPKATDGN 609
Query: 128 R 128
R
Sbjct: 610 R 610
>gi|380492932|emb|CCF34246.1| nuclear polyadenylated RNA-binding protein [Colletotrichum
higginsianum]
Length = 448
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 85/133 (63%), Gaps = 8/133 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSTGRSRGFGFLTFRDPKTVNIVMV-K 59
Query: 106 PHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNKE 158
H +DG++++ KRA+PR+ + V V++ E DYF Q+G + ++ +K+
Sbjct: 60 EHFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKD 119
Query: 159 TGAKRGFAFIEFD 171
TG RGF F+ F+
Sbjct: 120 TGRPRGFGFVTFE 132
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D K +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQETTDQEFKDYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ +S EI G+ +E K+A PR
Sbjct: 138 EACLSTS-LEIHGKPIEVKKAQPR 160
>gi|320588554|gb|EFX01022.1| heterogeneous nuclear ribonucleoprotein hrp1 [Grosmannia clavigera
kw1407]
Length = 524
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 85/134 (63%), Gaps = 8/134 (5%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL++ T D SL+ +F Q+GE+++ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 42 KMFIGGLNWETTDQSLRDYFSQFGEVLECTVMRDSATGRSRGFGFLTFKDPKTVNIVMVK 101
Query: 105 RPHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + V V++ E +YF Q+G + ++ +K
Sbjct: 102 E-HYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDK 160
Query: 158 ETGAKRGFAFIEFD 171
+TG RGF F+ F+
Sbjct: 161 DTGRPRGFGFLTFE 174
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D K +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 120 EQEKTSKIFVGGVSQETTDQEFKEYFAQFGRVVDATLMMDKDTGRPRGFGFLTFESEAGV 179
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ +S EI G+ +E K+A PR
Sbjct: 180 EACLSTE-LEIHGKAIEVKKAQPR 202
>gi|354497793|ref|XP_003511003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Cricetulus griseus]
Length = 286
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 29 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 88
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 89 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 147
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 148 NKTNKRRGFCFITFKEEEPVKKIMEKK 174
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 110 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 169
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 170 IMEKKYHNVGLSKCEIKVAMSKE 192
>gi|440898655|gb|ELR50103.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Bos grunniens
mutus]
Length = 277
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 20 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 79
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 80 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 138
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 139 NKTNKRRGFCFITFKEEEPVKKIMEKK 165
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 101 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 160
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 161 IMEKKYHNVGLSKCEIKVAMSKE 183
>gi|395834195|ref|XP_003790097.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Otolemur garnettii]
Length = 336
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 197
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 198 NKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|395542043|ref|XP_003772944.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Sarcophilus
harrisii]
Length = 306
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 49 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 108
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 109 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 167
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 168 NKTNKRRGFCFITFKEEEPVKKIMEKK 194
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 130 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 189
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 190 IMEKKYHNVGLSKCEIKVAMSKE 212
>gi|296196172|ref|XP_002745745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Callithrix jacchus]
Length = 325
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 68 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 127
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 128 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 186
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 187 NKTNKRRGFCFITFKEEEPVKKIMEKK 213
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 149 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 208
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 209 IMEKKYHNVGLSKCEIKVAMSKE 231
>gi|351695030|gb|EHA97948.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Heterocephalus
glaber]
Length = 277
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 20 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 79
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 80 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 138
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 139 NKTNKRRGFCFITFKEEEPVKKIMEKK 165
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 101 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 160
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 161 IMEKKYHNVGLSKCEIKVAMSKE 183
>gi|119626284|gb|EAX05879.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_f [Homo sapiens]
Length = 277
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 69 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 128
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 129 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 187
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 188 NKTNKRRGFCFITFKEEEPVKKIMEKK 214
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 150 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 209
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 210 IMEKKYHNVGLSKCEIKVAMSKE 232
>gi|85101893|ref|XP_961230.1| hypothetical protein NCU04239 [Neurospora crassa OR74A]
gi|11595517|emb|CAC18311.1| related to heterogeneous nuclear ribonucleoprotein [Neurospora
crassa]
gi|28922772|gb|EAA31994.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 503
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 84/133 (63%), Gaps = 8/133 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNKE 158
H +DG++++ KRA+PR+ + V V++ E +YF Q+G + ++ +K+
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKD 119
Query: 159 TGAKRGFAFIEFD 171
TG RGF F+ F+
Sbjct: 120 TGRPRGFGFVTFE 132
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ +S EI G+ +E K+A PR
Sbjct: 138 EACLSAN-LEIHGKPIEVKKAQPR 160
>gi|358367583|dbj|GAA84201.1| heterogeneous nuclear ribonucleoprotein Hrp1 [Aspergillus kawachii
IFO 4308]
Length = 471
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 88/143 (61%), Gaps = 10/143 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + + +K+ Q A E ++F Q+G + ++ +K
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIV 180
+TG RGF F+ FD V+ +
Sbjct: 119 DTGRPRGFGFVTFDSEAAVEAAL 141
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ N+ K FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ A+S P EI G+ +E K+A PR
Sbjct: 138 EAALSG-PLEICGKPIEVKKAQPR 160
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
DYF Q+G ++ ++ + TG RGF F+ F D V+ +++
Sbjct: 17 DYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMV 58
>gi|211826253|gb|AAH11172.2| Hnrnpd protein [Mus musculus]
Length = 351
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 94 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 153
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 154 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 212
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 213 NKTNKRRGFCFITFKEEEPVKKIMEKK 239
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 175 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 234
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 235 IMEKKYHNVGLSKCEIKVAMSKE 257
>gi|331284184|ref|NP_001193585.1| RNA-binding protein Musashi homolog 2 [Bos taurus]
Length = 354
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 90/176 (51%), Gaps = 41/176 (23%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ +
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-------------IALEQMD----------- 140
HE+D + ++ K A PR + + Q + L D
Sbjct: 78 PHHELDSKTIDPKVAFPRRAQPKGTFLTQGSNPRLLHWQADSLPLSHQDPRHAMVTRTKK 137
Query: 141 -----------------YFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKI 179
YF Q+G +E ++ +K T RGF F+ F++ DVV+K+
Sbjct: 138 IFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKV 193
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 136 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 195
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 196 IHFHEINNKMVECKKAQPKEVMFPPGTR 223
>gi|395834193|ref|XP_003790096.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Otolemur garnettii]
Length = 355
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|327273004|ref|XP_003221273.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Anolis
carolinensis]
Length = 334
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGFI + E++ VD+ M
Sbjct: 78 KMFIGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFILFKEAESVDKVMDQ 137
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K + K+ + D YFG +G +ES+ + +
Sbjct: 138 KEHKLNGKVIDPKRAKAMKTK-EPIKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 196
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F D + V KI+ K
Sbjct: 197 NKTNKRRGFCFITFKDEEPVKKIMEKK 223
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ + + V +
Sbjct: 159 EPIKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKDEEPVKK 218
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 219 IMEKKYHNVGLSKCEIKVAMSKE 241
>gi|148878011|gb|AAI46039.1| HNRNPD protein [Bos taurus]
Length = 355
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|14110417|ref|NP_112737.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Homo sapiens]
gi|332819428|ref|XP_003310368.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Pan
troglodytes]
gi|395735088|ref|XP_003776521.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 4
[Pongo abelii]
gi|402869393|ref|XP_003898747.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Papio anubis]
gi|2815614|gb|AAC23476.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|119626279|gb|EAX05874.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|119626283|gb|EAX05878.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|119626288|gb|EAX05883.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|158258851|dbj|BAF85396.1| unnamed protein product [Homo sapiens]
gi|380783615|gb|AFE63683.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
gi|383417961|gb|AFH32194.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
gi|384940048|gb|AFI33629.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
Length = 336
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 197
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 198 NKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|410351153|gb|JAA42180.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 337
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 80 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 139
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 140 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 198
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 199 NKTNKRRGFCFITFKEEEPVKKIMEKK 225
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 161 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 220
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 221 IMEKKYHNVGLSKCEIKVAMSKE 243
>gi|14110420|ref|NP_112738.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Homo sapiens]
gi|386782249|ref|NP_001247736.1| heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|114594005|ref|XP_001143807.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Pan troglodytes]
gi|297673867|ref|XP_002814969.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Pongo abelii]
gi|402869391|ref|XP_003898746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Papio anubis]
gi|13124489|sp|Q14103.1|HNRPD_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|870749|dbj|BAA09525.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815612|gb|AAC23474.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|12803191|gb|AAH02401.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|63990762|gb|AAY40913.1| unknown [Homo sapiens]
gi|119626280|gb|EAX05875.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|119626281|gb|EAX05876.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|123982850|gb|ABM83166.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|123997529|gb|ABM86366.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|355687289|gb|EHH25873.1| Heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|380783619|gb|AFE63685.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|383417965|gb|AFH32196.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|384940052|gb|AFI33631.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
Length = 355
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|410351149|gb|JAA42178.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 356
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 99 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 158
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 159 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 217
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 218 NKTNKRRGFCFITFKEEEPVKKIMEKK 244
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 180 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 239
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 240 IMEKKYHNVGLSKCEIKVAMSKE 262
>gi|397524667|ref|XP_003832310.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Pan paniscus]
Length = 355
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|51477708|ref|NP_001003810.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Homo sapiens]
gi|332819424|ref|XP_003310366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Pan
troglodytes]
gi|395735086|ref|XP_003776520.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Pongo abelii]
gi|119626285|gb|EAX05880.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_g [Homo sapiens]
Length = 287
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 197
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 198 NKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|116256516|ref|NP_001070735.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Mus musculus]
gi|148688365|gb|EDL20312.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_b [Mus
musculus]
Length = 287
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 197
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 198 NKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|116256518|ref|NP_001070734.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Mus musculus]
gi|148688364|gb|EDL20311.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_a [Mus
musculus]
Length = 336
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 197
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 198 NKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|134057544|emb|CAK48898.1| unnamed protein product [Aspergillus niger]
Length = 471
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 88/143 (61%), Gaps = 10/143 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SLK +F Q+GE+ + VM+D T RSRGFGF+T+ + K V+ M
Sbjct: 1 MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKV------QIALEQ--MDYFGQYGTIESVNMVTNK 157
H +DG++++ KRA+PR+ + + +K+ Q A E ++F Q+G + ++ +K
Sbjct: 61 -HYLDGKIIDPKRAIPRDEQ-EKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDK 118
Query: 158 ETGAKRGFAFIEFDDYDVVDKIV 180
+TG RGF F+ FD V+ +
Sbjct: 119 DTGRPRGFGFVTFDSEAAVEAAL 141
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ N+ K FF Q+G ++D +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQEANEHDFKEFFAQFGRVIDATLMIDKDTGRPRGFGFVTFDSEAAV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ A+S P EI G+ +E K+A PR
Sbjct: 138 EAALSG-PLEICGKPIEVKKAQPR 160
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVL 181
DYF Q+G ++ ++ + TG RGF F+ F D V+ +++
Sbjct: 17 DYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMV 58
>gi|116256512|ref|NP_001070733.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Mus musculus]
gi|33516945|sp|Q60668.2|HNRPD_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|148688367|gb|EDL20314.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_d [Mus
musculus]
Length = 355
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|395834191|ref|XP_003790095.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Otolemur garnettii]
Length = 306
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|350294627|gb|EGZ75712.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 324
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 85/133 (63%), Gaps = 8/133 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMV-K 59
Query: 106 PHEIDGRVVETKRAVPRE-------VKVRRVTKVQIALEQMDYFGQYGTIESVNMVTNKE 158
H +DG++++ KRA+PR+ + V V++ E +YF Q+G + ++ +K+
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKD 119
Query: 159 TGAKRGFAFIEFD 171
TG RGF F+ F+
Sbjct: 120 TGRPRGFGFVTFE 132
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ +S EI G+ +E K+A PR
Sbjct: 138 EACLSAN-LEIHGKPIEVKKAQPR 160
>gi|116256514|ref|NP_031542.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Mus musculus]
gi|29145079|gb|AAH49098.1| Heterogeneous nuclear ribonucleoprotein D [Mus musculus]
gi|148688366|gb|EDL20313.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_c [Mus
musculus]
Length = 306
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|194390332|dbj|BAG61935.1| unnamed protein product [Homo sapiens]
Length = 303
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 46 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 105
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 106 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 164
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 165 NKTNKRRGFCFITFKEEEPVKKIMEKK 191
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 127 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 186
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 187 IMEKKYHNVGLSKCEIKVAMSKE 209
>gi|157118269|ref|XP_001653144.1| heterogeneous nuclear ribonucleoprotein 27c [Aedes aegypti]
gi|94468876|gb|ABF18287.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
factor I complex subunit HRP1 [Aedes aegypti]
gi|108875770|gb|EAT39995.1| AAEL008257-PA [Aedes aegypti]
Length = 398
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 98/180 (54%), Gaps = 13/180 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL + T ++L+ +F ++GE++D VVMK+ T RSRGFGF+T+++ VD A+ N
Sbjct: 19 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPDNVDRALEN 78
Query: 105 RPHEIDGRVVETKRAVPREV-KVRR--------VTKVQIALEQMD---YFGQYGTIESVN 152
PH +DGR ++ K PR + K +R + + + + D +F +YG + V
Sbjct: 79 GPHTLDGRTIDPKPCNPRSLHKPKRTGGYPKVFLGGLPPNITETDLRSFFSRYGNVMEVV 138
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ-EVINGEDHRTHGTHQEAKVD 211
++ ++E RGF F+ F++ V++ + V + Q E+ E G + D
Sbjct: 139 IMYDQEKKKSRGFGFLSFENEPAVERATAEHFVNISGKQVEIKKAEPRDGSGNNNSMNAD 198
>gi|334330945|ref|XP_001364005.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Monodelphis domestica]
Length = 376
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 119 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 178
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 179 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 237
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 238 NKTNKRRGFCFITFKEEEPVKKIMEKK 264
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 200 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 259
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 260 IMEKKYHNVGLSKCEIKVAMSKE 282
>gi|426344801|ref|XP_004038942.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Gorilla gorilla gorilla]
Length = 291
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 34 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 93
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 94 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 152
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 153 NKTNKRRGFCFITFKEEEPVKKIMEKK 179
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 115 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 174
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 175 IMEKKYHNVGLSKCEIKVAMSKE 197
>gi|870743|dbj|BAA09522.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Length = 267
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 10 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 69
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 70 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 128
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 129 NKTNKRRGFCFITFKEEEPVKKIMEKK 155
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 91 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 150
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 151 IMEKKYHNVGLSKCEIKVAMSKE 173
>gi|2773158|gb|AAB96683.1| heterogeneous nuclear ribonucleoprotein D0B [Homo sapiens]
Length = 298
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 90 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 149
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 150 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 208
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 209 NKTNKRRGFCFITFKEEEPVKKIMEKK 235
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 171 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 230
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 231 IMEKKYHNVGLSKCEIKVAMSKE 253
>gi|14110414|ref|NP_002129.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Homo sapiens]
gi|114594009|ref|XP_001143722.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pan troglodytes]
gi|395735083|ref|XP_003776519.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pongo abelii]
gi|402869389|ref|XP_003898745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Papio anubis]
gi|870745|dbj|BAA09523.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815613|gb|AAC23475.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|18645125|gb|AAH23977.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|19683928|gb|AAH26015.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|119626282|gb|EAX05877.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626286|gb|EAX05881.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626287|gb|EAX05882.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|208966456|dbj|BAG73242.1| heterogeneous nuclear ribonucleoprotein D [synthetic construct]
gi|380783617|gb|AFE63684.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|383417963|gb|AFH32195.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|384940050|gb|AFI33630.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|410265342|gb|JAA20637.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
gi|410292488|gb|JAA24844.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 306
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|410351151|gb|JAA42179.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 307
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 99 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 158
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 159 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 217
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 218 NKTNKRRGFCFITFKEEEPVKKIMEKK 244
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 180 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 239
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 240 IMEKKYHNVGLSKCEIKVAMSKE 262
>gi|332233349|ref|XP_003265864.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Nomascus leucogenys]
Length = 355
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|355765936|gb|EHH62474.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Macaca
fascicularis]
Length = 302
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 45 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 104
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 105 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 163
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 164 NKTNKRRGFCFITFKEEEPVKKIMEKK 190
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 126 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 185
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 186 IMEKKYHNVGLSKCEIKVAMSKE 208
>gi|403263354|ref|XP_003924002.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Saimiri boliviensis boliviensis]
Length = 336
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 197
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 198 NKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|74001707|ref|XP_535627.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Canis lupus familiaris]
Length = 336
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 197
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 198 NKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|148230364|ref|NP_001091533.1| heterogeneous nuclear ribonucleoprotein D0 [Bos taurus]
gi|146231918|gb|ABQ13034.1| heterogeneous nuclear ribonucleoprotein D [Bos taurus]
gi|296486390|tpg|DAA28503.1| TPA: heterogeneous nuclear ribonucleoprotein D [Bos taurus]
Length = 306
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|403263352|ref|XP_003924001.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Saimiri boliviensis boliviensis]
Length = 355
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|870747|dbj|BAA09524.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Length = 215
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 7 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 66
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 67 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 125
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 126 NKTNKRRGFCFITFKEEEPVKKIMEKK 152
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 88 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 147
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 148 IMEKKYHNVGLSKCEIKVAMSKE 170
>gi|74001715|ref|XP_857957.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 11
[Canis lupus familiaris]
Length = 355
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|326934489|ref|XP_003213321.1| PREDICTED: DAZ-associated protein 1-like [Meleagris gallopavo]
Length = 397
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 25/161 (15%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGLD+ T ++L+ +F Q+GE+VD V+MKD T +SRGFGF+ + + V +++
Sbjct: 31 KLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 90
Query: 105 RPHEIDGRVVETKRAVPREVKVRRV-----------------TKVQIA--------LEQM 139
RPH +DGR ++ K PR ++ R K+ + E
Sbjct: 91 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGSRSDNNKSNKIFVGGIPHNCGETELR 150
Query: 140 DYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
+YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 151 EYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 191
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 57/83 (68%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 134 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 193
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
H+I G+ VE KRA PR+ K +
Sbjct: 194 HFHDIMGKKVEVKRAEPRDSKSQ 216
>gi|410957357|ref|XP_003985295.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Felis catus]
Length = 290
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 33 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 92
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 93 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 151
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 152 NKTNKRRGFCFITFKEEEPVKKIMEKK 178
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 114 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 173
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 174 IMEKKYHNVGLSKCEIKVAMSKE 196
>gi|403263350|ref|XP_003924000.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Saimiri boliviensis boliviensis]
Length = 306
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|358396002|gb|EHK45389.1| hypothetical protein TRIATDRAFT_131648 [Trichoderma atroviride IMI
206040]
Length = 405
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 94/156 (60%), Gaps = 11/156 (7%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SL+ +F Q+GE+V+ VM+D + RSRGFGF+T+ ++K V+ M
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSSSGRSRGFGFLTFKDAKTVNIVMVKE 60
Query: 106 PHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNKE 158
H +DG++++ KRA+PR+ + V V++ E +YF Q+G + ++ +K+
Sbjct: 61 -HFLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDKD 119
Query: 159 TGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVI 194
TG RGF F+ F+ VD + V LE+ + I
Sbjct: 120 TGRPRGFGFVTFESEAGVDACI---NVPLEIHGKPI 152
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQDTTDQEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
D A N P EI G+ +E K+A PR
Sbjct: 138 D-ACINVPLEIHGKPIEVKKAQPR 160
>gi|74001695|ref|XP_848950.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Canis lupus familiaris]
Length = 306
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|74001711|ref|XP_857875.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 9
[Canis lupus familiaris]
Length = 287
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 197
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 198 NKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|181914|gb|AAA35781.1| DNA-binding protein [Homo sapiens]
Length = 328
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 87/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 136
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 137 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 195
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RG FI F + + V KI+ K
Sbjct: 196 NKTNKRRGLCFITFKEEEPVKKIMEKK 222
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RG FIT+ E + V +
Sbjct: 158 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGLCFITFKEEEPVKK 217
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 218 IMEKKYHNVGLSKCEIKVAMSKE 240
>gi|224049399|ref|XP_002190694.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Taeniopygia guttata]
gi|449499942|ref|XP_004175399.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Taeniopygia
guttata]
Length = 318
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 61 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 120
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 121 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 179
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 180 NKTNKRRGFCFITFKEEEPVKKIMEKK 206
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 142 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 201
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 202 IMEKKYHNVGLSKCEIKVAMSKE 224
>gi|410292486|gb|JAA24843.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 355
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 157
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 158 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 216
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 217 NKTNKRRGFCFITFKEEEPVKKIMEKK 243
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 179 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 238
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 239 IMEKKYHNVGLSKCEIKVAMSKE 261
>gi|367025853|ref|XP_003662211.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
gi|347009479|gb|AEO56966.1| hypothetical protein MYCTH_2302558 [Myceliophthora thermophila ATCC
42464]
Length = 501
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 85/133 (63%), Gaps = 8/133 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMV-K 59
Query: 106 PHEIDGRVVETKRAVPREVK-------VRRVTKVQIALEQMDYFGQYGTIESVNMVTNKE 158
H +DG++++ KRA+PR+ + V V++ E +YF Q+G + ++ +K+
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKD 119
Query: 159 TGAKRGFAFIEFD 171
TG RGF F+ F+
Sbjct: 120 TGRPRGFGFVTFE 132
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 137
Query: 99 DEAMSNRPHEIDGRVVETKRAVPR 122
+ ++ EI G+ +E K+A PR
Sbjct: 138 EACLAAN-LEIHGKPIEVKKAQPR 160
>gi|336472157|gb|EGO60317.1| hypothetical protein NEUTE1DRAFT_56573, partial [Neurospora
tetrasperma FGSC 2508]
Length = 139
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 85/133 (63%), Gaps = 8/133 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL++ T D SL+ +F Q+GE+V+ VM+D T RSRGFGF+T+ + K V+ M +
Sbjct: 1 MFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDGATGRSRGFGFLTFKDPKTVNIVMV-K 59
Query: 106 PHEIDGRVVETKRAVPRE-------VKVRRVTKVQIALEQMDYFGQYGTIESVNMVTNKE 158
H +DG++++ KRA+PR+ + V V++ E +YF Q+G + ++ +K+
Sbjct: 60 EHYLDGKIIDPKRAIPRDEQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKD 119
Query: 159 TGAKRGFAFIEFD 171
TG RGF F+ F+
Sbjct: 120 TGRPRGFGFVTFE 132
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMV 98
E E K+F+GG+ T D + +F Q+G +VD +M D T R RGFGF+T+ V
Sbjct: 78 EQEKTSKIFVGGVSQETTDHEFREYFAQFGRVVDATLMMDKDTGRPRGFGFVTFESEAGV 137
Query: 99 D 99
+
Sbjct: 138 E 138
>gi|148227150|ref|NP_001088992.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Xenopus laevis]
gi|52082714|gb|AAU25946.1| p37 AUF1 [Xenopus laevis]
Length = 295
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 87/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 39 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDKVMEQ 98
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +E++ + +
Sbjct: 99 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEDKIREYFGTFGEVEAIELPMD 157
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + D V I+ K
Sbjct: 158 NKTNKRRGFCFITFKEEDPVKNIMEKK 184
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T +D ++ +F +GE+ + + D T + RGF FIT+ E V
Sbjct: 120 EPVKKIFVGGLSPDTPEDKIREYFGTFGEVEAIELPMDNKTNKRRGFCFITFKEEDPVKN 179
Query: 101 AMSNRPHEI 109
M + H +
Sbjct: 180 IMEKKYHNV 188
>gi|410292490|gb|JAA24845.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 336
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 138
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 139 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 197
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 198 NKTNKRRGFCFITFKEEEPVKKIMEKK 224
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 160 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 219
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 220 IMEKKYHNVGLSKCEIKVAMSKE 242
>gi|395505200|ref|XP_003756932.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Sarcophilus
harrisii]
Length = 278
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 88/144 (61%), Gaps = 6/144 (4%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+F+GGL + T+ LK +F ++GE+VD + DP T RSRGFGFI + ES VD+ + +
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDKVLDQK 60
Query: 106 PHEIDGRVVETKRAVP-REVKVRRVTKVQIALEQM-----DYFGQYGTIESVNMVTNKET 159
H +DGRV++ K+A+ ++ V+++ + E +YFG +G IES+ + + +T
Sbjct: 61 EHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPEATEDKIREYFGDFGEIESIELPMDPKT 120
Query: 160 GAKRGFAFIEFDDYDVVDKIVLDK 183
+RGF FI F + D V KI+ K
Sbjct: 121 NKRRGFVFITFKEEDPVKKILEKK 144
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ ++K+F+GGL+ +D ++ +F +GEI + + DP T + RGF FIT+ E V +
Sbjct: 80 DPVKKIFVGGLNPEATEDKIREYFGDFGEIESIELPMDPKTNKRRGFVFITFKEEDPVKK 139
Query: 101 AMSNRPHEIDGRVVETKRAVPREV 124
+ + H + G E K A P+EV
Sbjct: 140 ILEKKFHNVGGSKCEIKVAQPKEV 163
>gi|345327974|ref|XP_001505245.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Ornithorhynchus anatinus]
Length = 306
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + E++ VD+ M
Sbjct: 49 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKEAESVDKVMDQ 108
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 109 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 167
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 168 NKTNKRRGFCFITFKEEEPVKKIMEKK 194
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 130 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 189
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 190 IMEKKYHNVGLSKCEIKVAMSKE 212
>gi|356547342|ref|XP_003542073.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Glycine max]
Length = 353
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GG+ + T+ +S +F ++GE+ D V+M + ++ R RGFGF+T++ S + DE ++
Sbjct: 41 KLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFANSAVADEVLA- 99
Query: 105 RPHEIDGRVVETKRAVPRE-------VKVRRVTKVQIAL-----EQMDYFGQYGTIESVN 152
+ H ID RVVE KR VPRE K +++ IA E +YF YG +
Sbjct: 100 QEHTIDHRVVEVKRTVPREDVDVTGVFKTKKIFVGGIAQFFTDDELREYFSPYGNVIECQ 159
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKI 179
++ + TG RGF F+ FDD D V+K+
Sbjct: 160 IMLDHNTGRSRGFGFVTFDDEDSVEKV 186
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GG+ DD L+ +F +G +++ +M D T RSRGFGF+T+ + V++ S
Sbjct: 129 KKIFVGGIAQFFTDDELREYFSPYGNVIECQIMLDHNTGRSRGFGFVTFDDEDSVEKVFS 188
Query: 104 -NRPHEIDGRVVETKRAVPREVKV 126
+ HEI G+ VE KRA P+ V
Sbjct: 189 VGKIHEIGGKQVEIKRAEPKRSGV 212
>gi|432908112|ref|XP_004077759.1| PREDICTED: DAZ-associated protein 1-like [Oryzias latipes]
Length = 449
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 87/165 (52%), Gaps = 20/165 (12%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLFIGGL TNDD L+ FEQ+G + D VV+++ +RSR FGF+TYS + + AM+
Sbjct: 54 KLFIGGLCVNTNDDGLRKHFEQFGTLTDFVVLQNKNAQRSRCFGFVTYSTPEEANAAMAA 113
Query: 105 RPHEIDGRVVETKRAVP--REVKVRRVTKVQIAL-----------EQMDYFGQYGTIESV 151
PH ++G VE KRA+P ++ K K + DYF YG +E
Sbjct: 114 APHTVEGNSVEVKRAIPKAKDNKSEAFAKGEKIFVGGLRNDIKESHLTDYFSWYGQVEKS 173
Query: 152 NMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQEVING 196
++ KETG KRGF F+ F ++ D + L V +NG
Sbjct: 174 EILLEKETGKKRGFGFVHFTHHNSAD-------LALVVKYHTVNG 211
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 48/84 (57%)
Query: 40 PESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVD 99
P K+F+GGL + L +F ++G++ ++ D T + RGFGF+ ++ K D
Sbjct: 297 PAKGEKIFVGGLKNNIEEYHLTDYFSRYGQVEKSEILLDKETGKKRGFGFVHFTHHKTAD 356
Query: 100 EAMSNRPHEIDGRVVETKRAVPRE 123
A+ + H ++G +VE K+AV R+
Sbjct: 357 LALVEKYHTVNGHLVEVKKAVARQ 380
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 98 VDEAMSNRPHEIDGRVVETKRAVPRE--------VKVRR--VTKVQIALEQ---MDYFGQ 144
+ AM+ PH + V+ K AVP+ K + V ++ +E+ DYF +
Sbjct: 264 TNTAMAAAPHTVQRNSVKVKVAVPKRKANGSAAPAKGEKIFVGGLKNNIEEYHLTDYFSR 323
Query: 145 YGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
YG +E ++ +KETG KRGF F+ F + D +++K
Sbjct: 324 YGQVEKSEILLDKETGKKRGFGFVHFTHHKTADLALVEK 362
>gi|74214542|dbj|BAE31119.1| unnamed protein product [Mus musculus]
gi|74214594|dbj|BAE31140.1| unnamed protein product [Mus musculus]
Length = 405
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 89/164 (54%), Gaps = 24/164 (14%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ + KLF+GGLD+ T ++L+++F Q+GE+VD V+MKD T +SRGFGF+ + + V
Sbjct: 7 DEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGT 66
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRV----------------TKVQIA--------L 136
+++RPH +DGR ++ K PR ++ + K+ +
Sbjct: 67 VLASRPHTLDGRNIDPKPCTPRGMQPEQTRPKEGWKGPRSDSSKSNKIFVGGIPHNCGET 126
Query: 137 EQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
E +YF ++G + V M+ + E RGF FI F+D VD+ V
Sbjct: 127 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 170
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 55/81 (67%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GG+ + + L+ +F+++G + +VV++ D +R RGFGFIT+ + + VD+A++
Sbjct: 113 KIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNM 172
Query: 105 RPHEIDGRVVETKRAVPREVK 125
+I G+ VE KRA PR+ K
Sbjct: 173 HFRDIMGKKVEVKRAEPRDSK 193
>gi|417410064|gb|JAA51513.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 360
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 88/147 (59%), Gaps = 10/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 153 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 212
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 213 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 271
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
K T +RGF FI F + + V KI+ K
Sbjct: 272 K-TNKRRGFCFITFKEEEPVKKIMEKK 297
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D KR RGF FIT+ E + V +
Sbjct: 234 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDKTNKR-RGFCFITFKEEEPVKK 292
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 293 IMEKKYHNVGLSKCEIKVAMSKE 315
>gi|332019507|gb|EGI59986.1| Heterogeneous nuclear ribonucleoprotein 27C [Acromyrmex echinatior]
Length = 340
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 92/159 (57%), Gaps = 12/159 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL + T ++L+ +F ++GE++D VVMK+ + RSRGFGF+T+S+ V + N
Sbjct: 1 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVSLVLQN 60
Query: 105 RPHEIDGRVVETKRAVPREV-KVRR---VTKVQIA--------LEQMDYFGQYGTIESVN 152
PH++DGR ++ K PR + K +R KV + + YF ++G + V
Sbjct: 61 GPHQLDGRTIDPKPCNPRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSYFTRFGKVMEVV 120
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
++ ++E RGF F+ F+D + VD+ V + V L Q
Sbjct: 121 IMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQ 159
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 51/77 (66%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
K+F+GGL + L+++F ++G++++VV+M D K+SRGFGF+++ + + VD +
Sbjct: 89 FPKVFLGGLPSNVTETDLRSYFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCV 148
Query: 103 SNRPHEIDGRVVETKRA 119
+ ++G+ VE KRA
Sbjct: 149 AEHFVNLNGKQVEIKRA 165
>gi|444511805|gb|ELV09942.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 235
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 72/115 (62%), Gaps = 7/115 (6%)
Query: 76 MKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQIA 135
M+DP ++RSRGFGF+T+S VD AM+ RPH DGR E K AV RE +
Sbjct: 1 MRDPASQRSRGFGFVTFSSMAEVDVAMAARPHSTDGRTDEPKYAVAREEGSCNCEEAICG 60
Query: 136 LEQ-------MDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+++ DYF +YGTI+++ + T++++G K F F+ FDDYD VDKIVL K
Sbjct: 61 IKEDTEEHHLRDYFEEYGTIDTIEITTDRQSGKKERFGFVPFDDYDPVDKIVLQK 115
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 31 AMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFI 90
A E+ C+ E+ I G+ T + L+ +FE++G I + + D + + FGF+
Sbjct: 46 AREEGSCNCEEA-----ICGIKEDTEEHHLRDYFEEYGTIDTIEITTDRQSGKKERFGFV 100
Query: 91 TYSESKMVDEAMSNRPHEIDGRVVETKRAVPREVKVRR 128
+ + VD+ + + H I+G E ++A+ R+ K R+
Sbjct: 101 PFDDYDPVDKIVLQKYHTINGHSGEIRKALSRQ-KCRK 137
>gi|71896731|ref|NP_001026314.1| heterogeneous nuclear ribonucleoprotein D0 [Gallus gallus]
gi|326918726|ref|XP_003205639.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Meleagris gallopavo]
gi|53135954|emb|CAG32472.1| hypothetical protein RCJMB04_26e18 [Gallus gallus]
Length = 257
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 87/146 (59%), Gaps = 9/146 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M +
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTNK 157
H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 61 EHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDN 119
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 120 KTNKRRGFCFITFKEEEPVKKIMEKK 145
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 81 EPVKKIFVGGLSPDTPEEKIREYFGAFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 140
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 141 IMEKKYHNVGLSKCEIKVAMSKE 163
>gi|417410217|gb|JAA51585.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 379
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 88/147 (59%), Gaps = 10/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 172 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQ 231
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 232 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMD 290
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
K T +RGF FI F + + V KI+ K
Sbjct: 291 K-TNKRRGFCFITFKEEEPVKKIMEKK 316
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D KR RGF FIT+ E + V +
Sbjct: 253 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDKTNKR-RGFCFITFKEEEPVKK 311
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 312 IMEKKYHNVGLSKCEIKVAMSKE 334
>gi|156230072|gb|AAI52222.1| Msi2b protein [Danio rerio]
Length = 168
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 85/138 (61%), Gaps = 14/138 (10%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL ++T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T++++ VD+ ++
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNM 153
HE+D + ++ K A PR + + VT+ + + + YF Q+G +E +
Sbjct: 82 PHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 141
Query: 154 VTNKETGAKRG---FAFI 168
+ +K T RG F F+
Sbjct: 142 MFDKTTNRHRGKSLFCFV 159
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRG 86
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RG
Sbjct: 110 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRG 152
>gi|321469931|gb|EFX80909.1| hypothetical protein DAPPUDRAFT_224415 [Daphnia pulex]
Length = 464
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 87/164 (53%), Gaps = 17/164 (10%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T D+L +F Q+GE+VD VVMK+P T RSRGFGFIT+++ V + N
Sbjct: 21 KMFIGGLSWETTRDNLLRYFSQYGEVVDCVVMKNPETGRSRGFGFITFADPNNVGLVLQN 80
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTK--------------VQIALEQMD---YFGQYGT 147
PH +D R ++ K PR VR + + L + D +F QYG
Sbjct: 81 TPHILDNRTIDPKPCNPRAEMVRAPRRSMGTGNGYKVFLGGLPSNLTETDLRNFFSQYGK 140
Query: 148 IESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
+ V ++ ++E RGF F+ F+ + VD+ + V + Q
Sbjct: 141 VSEVVIMYDQEKKKSRGFGFLTFESEESVDRCTGEHYVSINGKQ 184
>gi|66911597|gb|AAH97855.1| LOC496375 protein [Xenopus laevis]
Length = 286
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 87/147 (59%), Gaps = 9/147 (6%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M
Sbjct: 30 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDKVMEQ 89
Query: 105 RPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTN 156
+ H+++G+V++ KRA + K V K+ + D YFG +G +E++ + +
Sbjct: 90 KEHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEDKIREYFGTFGEVEAIELPMD 148
Query: 157 KETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + D V I+ K
Sbjct: 149 NKTNKRRGFCFITFKEEDPVKNIMEKK 175
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T +D ++ +F +GE+ + + D T + RGF FIT+ E V
Sbjct: 111 EPVKKIFVGGLSPDTPEDKIREYFGTFGEVEAIELPMDNKTNKRRGFCFITFKEEDPVKN 170
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 171 IMEKKYHNVGLSKCEIKVALSKE 193
>gi|345777448|ref|XP_003431598.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Canis lupus
familiaris]
Length = 353
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 93/149 (62%), Gaps = 10/149 (6%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
LRK+F+GGL + T+ LK +F ++GE+VD + DP T RSRGFGFI + ++ V++ +
Sbjct: 119 LRKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVL 178
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ--MDYFGQYGTIESVNMV 154
+ H +DGRV++ K+A+ +K V K+ + A E+ +YFG++G IE++ +
Sbjct: 179 DQKEHRLDGRVIDPKKAM--AMKKDPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELP 236
Query: 155 TNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+ ++ +RGF FI F + + V K++ K
Sbjct: 237 MDPKSNKRRGFVFITFKEEEPVKKVLEKK 265
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 43/69 (62%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ ++K+F+GGL+ ++ ++ +F ++GEI + + DP + + RGF FIT+ E + V +
Sbjct: 201 DPVKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKSNKRRGFVFITFKEEEPVKK 260
Query: 101 AMSNRPHEI 109
+ + H I
Sbjct: 261 VLEKKFHTI 269
>gi|344249843|gb|EGW05947.1| Heterogeneous nuclear ribonucleoprotein D0 [Cricetulus griseus]
Length = 257
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 87/146 (59%), Gaps = 9/146 (6%)
Query: 46 LFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNR 105
+FIGGL + T LK +F ++GE+VD + DP+T RSRGFGF+ + ES+ VD+ M +
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQK 60
Query: 106 PHEIDGRVVETKRAVPREVKVRRVTKVQIALEQMD--------YFGQYGTIESVNMVTNK 157
H+++G+V++ KRA + K V K+ + D YFG +G +ES+ + +
Sbjct: 61 EHKLNGKVIDPKRAKAMKTK-EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDN 119
Query: 158 ETGAKRGFAFIEFDDYDVVDKIVLDK 183
+T +RGF FI F + + V KI+ K
Sbjct: 120 KTNKRRGFCFITFKEEEPVKKIMEKK 145
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E ++K+F+GGL T ++ ++ +F +GE+ + + D T + RGF FIT+ E + V +
Sbjct: 81 EPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKK 140
Query: 101 AMSNRPHEIDGRVVETKRAVPRE 123
M + H + E K A+ +E
Sbjct: 141 IMEKKYHNVGLSKCEIKVAMSKE 163
>gi|302672954|ref|XP_003026164.1| hypothetical protein SCHCODRAFT_71292 [Schizophyllum commune H4-8]
gi|300099845|gb|EFI91261.1| hypothetical protein SCHCODRAFT_71292 [Schizophyllum commune H4-8]
Length = 181
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 89/141 (63%), Gaps = 11/141 (7%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
LRK+FIGGL++ T DD+L+A+FEQ+G++ +M+D RSR F F+T+ + V+ M
Sbjct: 30 LRKMFIGGLNWDTTDDTLRAYFEQFGKVDACTIMRD-AAGRSRCFAFLTFEDPASVNAVM 88
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRRVTKV-------QIALEQMD-YFGQYGTIESVNMV 154
H +DG++++ KRA+PR+ + +R TK+ + E M +F Q+G + ++
Sbjct: 89 VKE-HTLDGKIIDPKRAIPRQ-EHQRATKLFIGGLPGSVTSESMRAFFSQFGKVIDSTVM 146
Query: 155 TNKETGAKRGFAFIEFDDYDV 175
++ETG +GF FI F+D DV
Sbjct: 147 LDRETGRSKGFGFISFEDTDV 167
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 39 EPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSES 95
E + KLFIGGL +S++AFF Q+G+++D VM D T RS+GFGFI++ ++
Sbjct: 109 EHQRATKLFIGGLPGSVTSESMRAFFSQFGKVIDSTVMLDRETGRSKGFGFISFEDT 165
>gi|222101818|gb|ACM44033.1| hnRNPA/B-like 28 [Bombyx mori]
Length = 256
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 103/182 (56%), Gaps = 26/182 (14%)
Query: 26 MIINKAMEDSQCSEPESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSR 85
M +N M+D + KLF+GGL + T+ ++L+ +F ++GE++D VVMK+ + RSR
Sbjct: 1 MRMNPDMDDDEKG------KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSR 54
Query: 86 GFGFITYSESKMVDEAMSNRPHEIDGRVVETKRAVPREV-KVRR---------------V 129
GFGF+T+++ +V+ + N PH++DGR ++ K PR + K +R V
Sbjct: 55 GFGFVTFADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNV 114
Query: 130 TKVQIALEQMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEV 189
T+ + + +FG+YG + V ++ ++E RGF F+ F+D V+++ + + L
Sbjct: 115 TETDLRV----FFGRYGKVMEVVIMYDQERKKSRGFGFLSFEDEISVERVTQEHFINLNG 170
Query: 190 DQ 191
Q
Sbjct: 171 KQ 172
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL + L+ FF ++G++++VV+M D K+SRGFGF+++ + V+
Sbjct: 104 KVFLGGLPSNVTETDLRVFFGRYGKVMEVVIMYDQERKKSRGFGFLSFEDEISVERVTQE 163
Query: 105 RPHEIDGRVVETKRAVPRE 123
++G+ VE KRA PR+
Sbjct: 164 HFINLNGKQVEIKRAEPRD 182
>gi|194217163|ref|XP_001500456.2| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2-like, partial [Equus caballus]
Length = 323
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 84/137 (61%), Gaps = 11/137 (8%)
Query: 54 RTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSNRPHEIDGRV 113
+T+ DSL+ +F ++GEI + +VM+DP TKRSRGFGF+T+++ VD+ + HE+D +
Sbjct: 26 QTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKT 85
Query: 114 VETKRAVPREVKVRRVTKVQ-----------IALEQMDYFGQYGTIESVNMVTNKETGAK 162
++ K A PR + + VT+ + + + YF Q+G +E ++ +K T
Sbjct: 86 IDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRH 145
Query: 163 RGFAFIEFDDYDVVDKI 179
RGF F+ F++ DVV+K+
Sbjct: 146 RGFGFVTFENEDVVEKV 162
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 44 RKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMS 103
+K+F+GGL T + +K +FEQ+G++ D ++M D T R RGFGF+T+ +V++
Sbjct: 105 KKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 164
Query: 104 NRPHEIDGRVVETKRAVPREVKVRRVTK 131
HEI+ ++VE K+A P+EV T+
Sbjct: 165 IHFHEINNKMVECKKAQPKEVMFPPGTR 192
>gi|340723465|ref|XP_003400110.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Bombus
terrestris]
Length = 443
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 92/159 (57%), Gaps = 12/159 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL + T ++L+ +F ++GE++D VVMK+ + RSRGFGF+T+S+ V + N
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 105 RPHEIDGRVVETKRAVPR-EVKVRR---VTKVQIA--------LEQMDYFGQYGTIESVN 152
PH++DGR ++ K PR + K +R KV + + +F ++G + V
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEVV 133
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
++ ++E RGF F+ F+D D VD+ V + V L Q
Sbjct: 134 IMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQ 172
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 54/83 (65%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL + L++FF ++G++++VV+M D K+SRGFGF+++ + VD ++
Sbjct: 104 KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
++G+ VE KRA PR+ +
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSSSK 186
>gi|328779568|ref|XP_393451.4| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like [Apis
mellifera]
Length = 442
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 92/159 (57%), Gaps = 12/159 (7%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
KLF+GGL + T ++L+ +F ++GE++D VVMK+ + RSRGFGF+T+S+ V + N
Sbjct: 14 KLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVTFSDPANVPLVLQN 73
Query: 105 RPHEIDGRVVETKRAVPR-EVKVRR---VTKVQIA--------LEQMDYFGQYGTIESVN 152
PH++DGR ++ K PR + K +R KV + + +F ++G + V
Sbjct: 74 GPHQLDGRTIDPKPCNPRTQQKPKRSGGFPKVFLGGLPSNVTETDLRSFFTRFGKVMEVV 133
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKIVLDKVVVLEVDQ 191
++ ++E RGF F+ F+D D VD+ V + V L Q
Sbjct: 134 IMYDQEKKKSRGFGFLSFEDEDAVDRCVAEHFVNLNGKQ 172
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 54/83 (65%)
Query: 45 KLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAMSN 104
K+F+GGL + L++FF ++G++++VV+M D K+SRGFGF+++ + VD ++
Sbjct: 104 KVFLGGLPSNVTETDLRSFFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEDAVDRCVAE 163
Query: 105 RPHEIDGRVVETKRAVPREVKVR 127
++G+ VE KRA PR+ +
Sbjct: 164 HFVNLNGKQVEIKRAEPRDSSSK 186
>gi|426396664|ref|XP_004064551.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2-like
[Gorilla gorilla gorilla]
Length = 269
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 67/96 (69%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
LRKLFIG L + T D+SL++ +E+WG + D VVM+DP TKRSRG GF+TY+ + VD A
Sbjct: 13 LRKLFIGDLSFETTDESLRSHYERWGMLTDCVVMRDPNTKRSRGCGFVTYATVEEVDAAT 72
Query: 103 SNRPHEIDGRVVETKRAVPREVKVRRVTKVQIALEQ 138
+ RPH++DG+VVE KR V RE R + I + +
Sbjct: 73 NARPHKVDGKVVEPKRTVSREDSQRPGAHLTIVIPK 108
>gi|326431512|gb|EGD77082.1| RNA binding protein [Salpingoeca sp. ATCC 50818]
Length = 386
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 94/163 (57%), Gaps = 23/163 (14%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E+ RK+F+G LD RT + L +F+++G IVD VVM D RSRGFGF+T+ E+ V++
Sbjct: 16 ENNRKIFVGSLDPRTTREQLVDYFDKFGNIVDCVVMTDAQGTRSRGFGFVTFKEAASVEQ 75
Query: 101 AMSNRPHEIDGRVVETKRAVPR------------------EVKVRRV-----TKVQIALE 137
+++ PHEI GRV++ KRA+PR + +VR+V E
Sbjct: 76 VLASGPHEIAGRVIDPKRALPRHHHDDPHQQQQQQPQQHRQPRVRKVFLGGLPHDAKEEE 135
Query: 138 QMDYFGQYGTIESVNMVTNKETGAKRGFAFIEFDDYDVVDKIV 180
D+F +YG +E V + ++ +G RGF F+ F++ VD++V
Sbjct: 136 IKDFFSKYGDVEDVIIQYDRISGRPRGFGFVVFENDATVDQLV 178
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 43 LRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDEAM 102
+RK+F+GGL + ++ +K FF ++G++ DV++ D ++ R RGFGF+ + VD+ +
Sbjct: 119 VRKVFLGGLPHDAKEEEIKDFFSKYGDVEDVIIQYDRISGRPRGFGFVVFENDATVDQLV 178
Query: 103 SNRPH---EIDGRVVETKRAVPREVKVRRVTKVQ 133
++ E G+ VE KRA P+E R T Q
Sbjct: 179 TSSERVYVEFKGKRVEIKRAFPKESAPRSSTARQ 212
>gi|26345118|dbj|BAC36208.1| unnamed protein product [Mus musculus]
Length = 285
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 91/151 (60%), Gaps = 10/151 (6%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
E K+F+GGL + T+ LK +F ++GE+VD + DP T RSRGFGFI + +S V++
Sbjct: 72 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEK 131
Query: 101 AMSNRPHEIDGRVVETKRAVPREVKVRRVTKVQI------ALEQ--MDYFGQYGTIESVN 152
+ + H +DGRV++ K+A+ +K V K+ + A E+ +YFGQ+G IE++
Sbjct: 132 VLDQKEHRLDGRVIDPKKAM--AMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIE 189
Query: 153 MVTNKETGAKRGFAFIEFDDYDVVDKIVLDK 183
+ + + +RGF FI F + D V K++ K
Sbjct: 190 LPIDPKLNKRRGFVFITFKEEDPVKKVLEKK 220
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%)
Query: 41 ESLRKLFIGGLDYRTNDDSLKAFFEQWGEIVDVVVMKDPVTKRSRGFGFITYSESKMVDE 100
+ ++K+F+GGL+ ++ ++ +F Q+GEI + + DP + RGF FIT+ E V +
Sbjct: 156 DPVKKIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKK 215
Query: 101 AMSNRPHEIDGRVVETKRAVPREV 124
+ + H + G E K A P+EV
Sbjct: 216 VLEKKFHTVSGSKCEIKVAQPKEV 239
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.138 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,446,909,054
Number of Sequences: 23463169
Number of extensions: 175346749
Number of successful extensions: 520757
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 12376
Number of HSP's successfully gapped in prelim test: 5546
Number of HSP's that attempted gapping in prelim test: 475568
Number of HSP's gapped (non-prelim): 40521
length of query: 306
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 164
effective length of database: 9,027,425,369
effective search space: 1480497760516
effective search space used: 1480497760516
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)