AmiGO: BLAST Results


BLAST match view associations BLAST with E(spl)mdelta-HLH E(spl)mdelta-HLH E(spl)mdelta-HLH Enhancer of split mdelta, helix-loop-helix	protein from Drosophila melanogaster	2.2e-11
BLAST match view associations BLAST with E(spl)m7-HLH E(spl)m7-HLH E(spl)m7-HLH Enhancer of split m7, helix-loop-helix	protein from Drosophila melanogaster	7.8e-11
BLAST match view associations BLAST with E(spl)mgamma-HLH E(spl)mgamma-HLH E(spl)mgamma-HLH Enhancer of split mgamma, helix-loop-helix	protein from Drosophila melanogaster	1.3e-10
BLAST match view associations BLAST with her8a her8a her8a hairy-related 8a	gene_product from Danio rerio	5.6e-10
BLAST match view associations BLAST with E(spl)mbeta-HLH E(spl)mbeta-HLH E(spl)mbeta-HLH Enhancer of split mbeta, helix-loop-helix	protein from Drosophila melanogaster	5.5e-09
BLAST match view associations BLAST with HES4 HES4 HES4 Uncharacterized protein	protein from Canis lupus familiaris	2.7e-08
BLAST match view associations BLAST with dpn dpn dpn deadpan	protein from Drosophila melanogaster	3.8e-08
BLAST match view associations BLAST with HES2 HES2 HES2 Transcription factor HES-2	protein from Homo sapiens	9.5e-08
BLAST match view associations BLAST with Hes1 Hes1 Hes1 hairy and enhancer of split 1 (Drosophila)	gene from Rattus norvegicus	9.3e-07
BLAST match view associations BLAST with her9 her9 her9 hairy-related 9	gene_product from Danio rerio	1.3e-06
BLAST match view associations BLAST with her8.2 her8.2 her8.2 hairy-related 8.2	gene_product from Danio rerio	2.0e-06
BLAST match view associations BLAST with hes4-a hes4-a hes4-a Transcription factor HES-4-A	protein from Xenopus laevis	6.0e-06
BLAST match view associations BLAST with her6 her6 her6 hairy-related 6	gene_product from Danio rerio	7.0e-06
BLAST match view associations BLAST with hes4-b hes4-b hes4-b Transcription factor HES-4-B	protein from Xenopus laevis	9.8e-06
BLAST match view associations BLAST with hes4 hes4 hes4 Transcription factor HES-4	protein from Xenopus (Silurana) tropicalis	1.0e-05
BLAST match view associations BLAST with Hes1 Hes1 Hes1 hairy and enhancer of split 1 (Drosophila)	protein from Mus musculus	1.0e-05
BLAST match view associations BLAST with hes1-b hes1-b hes1-b Transcription factor HES-1-B	protein from Xenopus laevis	1.2e-05
BLAST match view associations BLAST with HES4 HES4 HES4 Uncharacterized protein	protein from Canis lupus familiaris	1.2e-05
BLAST match view associations BLAST with HES1 HES1 HES1 Transcription factor HES-1	protein from Bos taurus	1.3e-05
BLAST match view associations BLAST with HES1 HES1 HES1 Transcription factor HES-1	protein from Homo sapiens	1.3e-05
BLAST match view associations BLAST with HES1 HES1 HES1 Uncharacterized protein	protein from Sus scrofa	1.3e-05
BLAST match view associations BLAST with HES4 HES4 HES4 Uncharacterized protein	protein from Canis lupus familiaris	1.5e-05
BLAST match view associations BLAST with HES1 HES1 HES1 Transcription factor HES-1	protein from Bos taurus	1.6e-05
BLAST match view associations BLAST with LOC100037036 LOC100037036 LOC100037036 LOC100037036 protein	protein from Xenopus laevis	2.4e-05
BLAST match view associations BLAST with hes1 hes1 hes1 Transcription factor HES-1	protein from Xenopus (Silurana) tropicalis	2.6e-05
BLAST match view associations BLAST with hes1-a hes1-a hes1-a Transcription factor HES-1-A	protein from Xenopus laevis	2.6e-05
BLAST match view associations BLAST with HES4 HES4 HES4 Transcription factor HES-4	protein from Homo sapiens	3.5e-05
BLAST match view associations BLAST with LOC100739264 LOC100739264 LOC100739264 Uncharacterized protein	protein from Sus scrofa	3.5e-05
BLAST match view associations BLAST with HES4 HES4 HES4 Transcription factor HES-4	protein from Homo sapiens	4.2e-05
BLAST match view associations BLAST with HES4 HES4 HES4 Transcription factor HES-4	protein from Homo sapiens	6.0e-05
BLAST match view associations BLAST with HES1 HES1 HES1 Transcription factor HES-1	protein from Gallus gallus	7.0e-05
BLAST match view associations BLAST with LOC100622397 LOC100622397 LOC100622397 Uncharacterized protein	protein from Sus scrofa	7.6e-05
BLAST match view associations BLAST with her13 her13 her13 hairy-related 13	gene_product from Danio rerio	7.6e-05
BLAST match view associations BLAST with Side Side Side similar to Deadpan	protein from Drosophila melanogaster	8.8e-05
BLAST match view associations BLAST with HES2 HES2 HES2 Uncharacterized protein	protein from Bos taurus	0.00019
BLAST match view associations BLAST with h h h hairy	protein from Drosophila melanogaster	0.00021
BLAST match view associations BLAST with Hey Hey Hey Hairy/E(spl)-related with YRPW motif	protein from Drosophila melanogaster	0.00032
BLAST match view associations BLAST with HES4 HES4 HES4 Uncharacterized protein	protein from Bos taurus	0.00038
BLAST match view associations BLAST with Hes6 Hes6 Hes6 hairy and enhancer of split 6	protein from Mus musculus	0.00087
BLAST match view associations BLAST with HES2 HES2 HES2 Uncharacterized protein	protein from Sus scrofa	0.00097
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy14691
        (332 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0002734 - symbol:E(spl)mdelta-HLH "Enhancer of spl...   161  2.2e-11   1
FB|FBgn0002633 - symbol:E(spl)m7-HLH "Enhancer of split m...   156  7.8e-11   1
FB|FBgn0002735 - symbol:E(spl)mgamma-HLH "Enhancer of spl...   154  1.3e-10   1
ZFIN|ZDB-GENE-030131-2376 - symbol:her8a "hairy-related 8...   162  5.6e-10   1
FB|FBgn0002733 - symbol:E(spl)mbeta-HLH "Enhancer of spli...   142  5.5e-09   1
UNIPROTKB|J9NV17 - symbol:HES4 "Uncharacterized protein" ...   133  2.7e-08   1
FB|FBgn0010109 - symbol:dpn "deadpan" species:7227 "Droso...   153  3.8e-08   1
UNIPROTKB|Q9Y543 - symbol:HES2 "Transcription factor HES-...   128  9.5e-08   1
UNIPROTKB|E1C412 - symbol:HES6 "Uncharacterized protein" ...   138  3.0e-07   1
UNIPROTKB|E1C2Y3 - symbol:HES6 "Uncharacterized protein" ...   128  7.6e-07   1
RGD|62081 - symbol:Hes1 "hairy and enhancer of split 1 (D...   137  9.3e-07   1
ZFIN|ZDB-GENE-011213-1 - symbol:her9 "hairy-related 9" sp...   136  1.3e-06   1
ZFIN|ZDB-GENE-060815-4 - symbol:her8.2 "hairy-related 8.2...   131  2.0e-06   1
UNIPROTKB|Q90Z12 - symbol:hes4-a "Transcription factor HE...   130  6.0e-06   1
ZFIN|ZDB-GENE-980526-144 - symbol:her6 "hairy-related 6" ...   131  7.0e-06   1
UNIPROTKB|Q90VV1 - symbol:hes4-b "Transcription factor HE...   128  9.8e-06   1
UNIPROTKB|Q6PBD4 - symbol:hes4 "Transcription factor HES-...   128  1.0e-05   1
MGI|MGI:104853 - symbol:Hes1 "hairy and enhancer of split...   128  1.0e-05   1
UNIPROTKB|Q8AVU4 - symbol:hes1-b "Transcription factor HE...   127  1.2e-05   1
UNIPROTKB|J9NTM5 - symbol:HES4 "Uncharacterized protein" ...   124  1.2e-05   1
UNIPROTKB|Q3ZBG4 - symbol:HES1 "Transcription factor HES-...   127  1.3e-05   1
UNIPROTKB|Q14469 - symbol:HES1 "Transcription factor HES-...   127  1.3e-05   1
UNIPROTKB|I3LM61 - symbol:HES1 "Uncharacterized protein" ...   127  1.3e-05   1
UNIPROTKB|E2R7Q8 - symbol:HES4 "Uncharacterized protein" ...   124  1.5e-05   1
UNIPROTKB|G3N2D5 - symbol:HES1 "Transcription factor HES-...   127  1.6e-05   1
UNIPROTKB|A1L3K9 - symbol:LOC100037036 "LOC100037036 prot...   122  2.4e-05   1
UNIPROTKB|Q5PPM5 - symbol:hes1 "Transcription factor HES-...   124  2.6e-05   1
UNIPROTKB|Q6IRB2 - symbol:hes1-a "Transcription factor HE...   124  2.6e-05   1
UNIPROTKB|F1NWS0 - symbol:F1NWS0 "Uncharacterized protein...   121  3.0e-05   1
UNIPROTKB|F1P2S5 - symbol:F1P2S5 "Uncharacterized protein...   121  3.1e-05   1
UNIPROTKB|F1NWR8 - symbol:F1NWR8 "Uncharacterized protein...   123  3.3e-05   1
UNIPROTKB|D6REB3 - symbol:HES4 "Transcription factor HES-...   118  3.5e-05   1
UNIPROTKB|I3LBX1 - symbol:HES4 "Uncharacterized protein" ...   121  3.5e-05   1
UNIPROTKB|Q9HCC6 - symbol:HES4 "Transcription factor HES-...   120  4.2e-05   1
UNIPROTKB|E9PB28 - symbol:HES4 "Transcription factor HES-...   120  6.0e-05   1
UNIPROTKB|O57337 - symbol:HES1 "Transcription factor HES-...   121  7.0e-05   1
UNIPROTKB|F1SIU5 - symbol:HES6 "Uncharacterized protein" ...   118  7.6e-05   1
ZFIN|ZDB-GENE-050228-1 - symbol:her13 "hairy-related 13" ...   118  7.6e-05   1
FB|FBgn0032741 - symbol:Side "similar to Deadpan" species...   124  8.8e-05   1
UNIPROTKB|F1N0L3 - symbol:HES2 "Uncharacterized protein" ...   109  0.00019   1
FB|FBgn0001168 - symbol:h "hairy" species:7227 "Drosophil...   118  0.00021   1
FB|FBgn0027788 - symbol:Hey "Hairy/E(spl)-related with YR...   118  0.00032   1
UNIPROTKB|E1BP65 - symbol:HES4 "Uncharacterized protein" ...   112  0.00038   1
MGI|MGI:1859852 - symbol:Hes6 "hairy and enhancer of spli...   109  0.00087   1
UNIPROTKB|F1RIL7 - symbol:HES2 "Uncharacterized protein" ...   104  0.00097   1


>FB|FBgn0002734 [details] [associations]
            symbol:E(spl)mdelta-HLH "Enhancer of split mdelta,
            helix-loop-helix" species:7227 "Drosophila melanogaster"
            [GO:0003677 "DNA binding" evidence=ISS;NAS] [GO:0005634 "nucleus"
            evidence=IC;NAS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS;IDA;IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] [GO:0048749 "compound eye development" evidence=TAS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0007219 "Notch signaling pathway" evidence=NAS]
            [GO:0007399 "nervous system development" evidence=NAS] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0045466 "R7 cell
            differentiation" evidence=IMP] [GO:0048052 "R1/R6 cell
            differentiation" evidence=IMP] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 EMBL:AE014297 GO:GO:0005634
            GO:GO:0043565 GO:GO:0007219 GO:GO:0003700 GO:GO:0006351
            GO:GO:0000122 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104130 KO:K09090 GO:GO:0045466
            EMBL:AY779906 EMBL:AY779907 EMBL:AY779908 EMBL:AY779909
            EMBL:AY779910 EMBL:AY779911 EMBL:AY779912 EMBL:AY779913
            EMBL:AY779914 EMBL:AY779915 EMBL:AY779916 EMBL:AY779917
            EMBL:AY779918 EMBL:AY779919 EMBL:AY779920 EMBL:AY779921 EMBL:X67048
            EMBL:M96168 EMBL:BT022133 EMBL:AY905719 EMBL:AY905720 EMBL:AY905721
            EMBL:AY905722 EMBL:AY905723 EMBL:AY905724 EMBL:AY905725
            EMBL:AY905726 EMBL:AY905727 EMBL:AY905728 EMBL:AY905729
            EMBL:AY905730 EMBL:AY905731 EMBL:AY905732 EMBL:AY905733
            EMBL:AY905734 EMBL:AY905735 EMBL:AY905736 EMBL:AY905737
            EMBL:AY905738 EMBL:AY905739 EMBL:AY905740 EMBL:AY905741
            EMBL:AY905742 EMBL:AY905743 EMBL:AY905744 EMBL:AY905745
            EMBL:AY905746 EMBL:AY905747 EMBL:AY905748 EMBL:AY905749
            EMBL:AY905750 EMBL:AY905751 EMBL:AY905752 EMBL:AY905753
            EMBL:AY905754 EMBL:AY905755 EMBL:AY905756 EMBL:AY905757
            EMBL:AY905758 EMBL:AY905759 EMBL:AY905760 EMBL:AY905761
            EMBL:AY905762 EMBL:AY905763 EMBL:AY905764 EMBL:AY905765
            EMBL:AY905766 EMBL:AY905767 EMBL:AY905768 EMBL:AY905769
            EMBL:AY905770 EMBL:AY905771 EMBL:AY905772 EMBL:AY905773
            EMBL:AY905774 EMBL:AY905775 EMBL:AY905776 EMBL:AY905777
            EMBL:AY905778 EMBL:AY905779 EMBL:AY905780 EMBL:AY905781
            EMBL:AY905782 EMBL:AY905783 EMBL:AY905784 EMBL:AY905785
            EMBL:AY905786 EMBL:AY905787 EMBL:AY905788 EMBL:AY905789
            EMBL:AY905790 EMBL:AY905791 EMBL:AY905792 EMBL:AY905793
            EMBL:AY905794 EMBL:AY905795 EMBL:AY905796 EMBL:AY905797
            EMBL:AY905798 EMBL:AY905799 EMBL:AY905800 EMBL:AY905801
            EMBL:AY905802 EMBL:AY905803 EMBL:AY905804 EMBL:AY905805
            EMBL:AY905806 EMBL:AY905807 EMBL:AY905808 EMBL:AY905809
            EMBL:AY905810 EMBL:AY905811 PIR:A46177 RefSeq:NP_524503.2
            UniGene:Dm.2355 ProteinModelPortal:Q01071 SMR:Q01071 DIP:DIP-722N
            IntAct:Q01071 MINT:MINT-288607 STRING:Q01071 PRIDE:Q01071
            EnsemblMetazoa:FBtr0084954 GeneID:43150 KEGG:dme:Dmel_CG8328
            CTD:43150 FlyBase:FBgn0002734 eggNOG:NOG253790 InParanoid:Q01071
            OMA:YEVSHIF OrthoDB:EOG4VQ85K PhylomeDB:Q01071 GenomeRNAi:43150
            NextBio:832427 Bgee:Q01071 GermOnline:CG8328 GO:GO:0048052
            Uniprot:Q01071
        Length = 173

 Score = 161 (61.7 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 35/88 (39%), Positives = 53/88 (60%)

Query:    81 VQRFQAEGENINKLEKADILELTVRHL-----HRITKPHNPTEE---VQRFQAGFTQCAS 132
             V    A+GE ++KLEKADILELTV +L      R+  P +P  +   + +F+AG+TQ A 
Sbjct:    43 VDTMDAQGEQVSKLEKADILELTVNYLKAQQQQRVANPQSPPPDQVNLDKFRAGYTQAAY 102

Query:   133 EACGFLLSLPGLDTRVGKRLVEHLGKRI 160
             E      ++PGLD + G  L++ LG ++
Sbjct:   103 EVSHIFSTVPGLDLKFGTHLMKQLGHQL 130


>FB|FBgn0002633 [details] [associations]
            symbol:E(spl)m7-HLH "Enhancer of split m7, helix-loop-helix"
            species:7227 "Drosophila melanogaster" [GO:0001078 "RNA polymerase
            II core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in negative regulation of
            transcription" evidence=IDA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0008134 "transcription factor binding" evidence=IGI;IPI]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS;TAS] [GO:0048749 "compound eye development"
            evidence=TAS] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
            [GO:0048666 "neuron development" evidence=IMP] [GO:0048854 "brain
            morphogenesis" evidence=IMP] [GO:0001964 "startle response"
            evidence=IMP] [GO:0031987 "locomotion involved in locomotory
            behavior" evidence=IMP] [GO:2001020 "regulation of response to DNA
            damage stimulus" evidence=IGI] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 EMBL:AE014297 GO:GO:0005634
            GO:GO:0001078 GO:GO:0043565 GO:GO:0048813 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0048749 GO:GO:0048854
            InterPro:IPR018352 SMART:SM00511 GO:GO:0031987 GO:GO:0001964
            GeneTree:ENSGT00700000104130 KO:K09090 EMBL:AY779906 EMBL:AY779907
            EMBL:AY779908 EMBL:AY779909 EMBL:AY779910 EMBL:AY779911
            EMBL:AY779912 EMBL:AY779913 EMBL:AY779914 EMBL:AY779915
            EMBL:AY779916 EMBL:AY779917 EMBL:AY779918 EMBL:AY779919
            EMBL:AY779920 EMBL:AY779921 EMBL:X16553 EMBL:BT022121 PIR:S03626
            RefSeq:NP_536753.1 UniGene:Dm.24100 ProteinModelPortal:P13097
            SMR:P13097 DIP:DIP-626N IntAct:P13097 MINT:MINT-188653
            STRING:P13097 PRIDE:P13097 EnsemblMetazoa:FBtr0084960 GeneID:43160
            KEGG:dme:Dmel_CG8361 CTD:43160 FlyBase:FBgn0002633 eggNOG:NOG241578
            InParanoid:P13097 OMA:FRAGYIR OrthoDB:EOG4BG7C7 PhylomeDB:P13097
            GenomeRNAi:43160 NextBio:832477 Bgee:P13097 GermOnline:CG8361
            Uniprot:P13097
        Length = 186

 Score = 156 (60.0 bits), Expect = 7.8e-11, P = 7.8e-11
 Identities = 33/72 (45%), Positives = 46/72 (63%)

Query:    93 KLEKADILELTVRHLHRI--TKPHNPTEEVQRFQAGFTQCASEACGFLLSLPGLDTRVGK 150
             K EKADILE+TV+HL ++  +K H P    Q F+AG+ + A+E    L SLP +D   G 
Sbjct:    51 KFEKADILEVTVQHLRKLKESKKHVPANPEQSFRAGYIRAANEVSRALASLPRVDVAFGT 110

Query:   151 RLVEHLGKRISQ 162
              L+ HLG R++Q
Sbjct:   111 TLMTHLGMRLNQ 122


>FB|FBgn0002735 [details] [associations]
            symbol:E(spl)mgamma-HLH "Enhancer of split mgamma,
            helix-loop-helix" species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=IC;NAS] [GO:0003677 "DNA binding"
            evidence=ISS;NAS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS;IMP;IDA;TAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0048749 "compound eye development" evidence=TAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=NAS] [GO:0007399 "nervous system
            development" evidence=NAS] [GO:0007219 "Notch signaling pathway"
            evidence=NAS] [GO:0008134 "transcription factor binding"
            evidence=IGI] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0048190 "wing disc dorsal/ventral pattern
            formation" evidence=IGI] [GO:0002052 "positive regulation of
            neuroblast proliferation" evidence=IMP] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 EMBL:AE014297 GO:GO:0005634
            GO:GO:0048190 GO:GO:0043565 GO:GO:0007219 GO:GO:0003700
            GO:GO:0006351 GO:GO:0000122 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 GO:GO:0048749 GO:GO:0002052 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104130 KO:K09090 EMBL:AY779906
            EMBL:AY779907 EMBL:AY779908 EMBL:AY779909 EMBL:AY779910
            EMBL:AY779911 EMBL:AY779912 EMBL:AY779913 EMBL:AY779914
            EMBL:AY779915 EMBL:AY779916 EMBL:AY779917 EMBL:AY779918
            EMBL:AY779919 EMBL:AY779920 EMBL:AY779921 OrthoDB:EOG4J3V0B
            EMBL:X67049 EMBL:M96167 EMBL:AJ276315 EMBL:BT022125 PIR:B46177
            RefSeq:NP_524504.2 UniGene:Dm.1339 ProteinModelPortal:Q01070
            SMR:Q01070 DIP:DIP-723N IntAct:Q01070 STRING:Q01070 PRIDE:Q01070
            EnsemblMetazoa:FBtr0084955 GeneID:43151 KEGG:dme:Dmel_CG8333
            CTD:43151 FlyBase:FBgn0002735 eggNOG:NOG256051 InParanoid:Q01070
            OMA:ESEGEHV PhylomeDB:Q01070 GenomeRNAi:43151 NextBio:832432
            Bgee:Q01070 GermOnline:CG8333 Uniprot:Q01070
        Length = 205

 Score = 154 (59.3 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 39/112 (34%), Positives = 64/112 (57%)

Query:    70 RITKPHDPTEE--VQRFQAEGENINKLEKADILELTVRHLHRIT--KPHNPT--EE---- 119
             RI K  D  ++  V   ++EGE++ +LEKADILELTV HL ++   + H     +E    
Sbjct:    30 RINKCLDELKDLMVATLESEGEHVTRLEKADILELTVTHLQKMKQQRQHKRASGDESLTP 89

Query:   120 VQRFQAGFTQCASEACGFLLSLPGLDTRVGKRLVEHLGKRISQSLEANPALL 171
              + F++G+    +E    L  LPG++  +G +L+ HLG+R++Q   A   +L
Sbjct:    90 AEGFRSGYIHAVNEVSRSLSQLPGMNVSLGTQLMTHLGQRLNQIQPAEKEVL 141


>ZFIN|ZDB-GENE-030131-2376 [details] [associations]
            symbol:her8a "hairy-related 8a" species:7955
            "Danio rerio" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0050768 "negative regulation of neurogenesis" evidence=IMP]
            [GO:0042063 "gliogenesis" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-030131-2376 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042063
            GO:GO:0050768 GeneTree:ENSGT00700000104130 EMBL:CR848737
            IPI:IPI00487719 Ensembl:ENSDART00000123395 ArrayExpress:F1QI81
            Uniprot:F1QI81
        Length = 253

 Score = 162 (62.1 bits), Expect = 5.6e-10, P = 5.6e-10
 Identities = 60/206 (29%), Positives = 93/206 (45%)

Query:    50 ENINKLEKADILELTVRHLHRITKPHDPTEEVQRFQAEGENIN--KLEKADILELTVRHL 107
             +N N  E+  + +  +    R  + +   E+++    +  N++  KLEKAD+LE+TV+H+
Sbjct:    44 KNFNAKEERKLRKPLIEKKRR-ERINSSLEQLKGIMVDAYNLDQSKLEKADVLEITVQHM 102

Query:   108 HRITKPH------NPT---EEVQRFQAGFTQCASEACGFLLSLPGLDTRVGKRLVEHLGK 158
               + + H      +P    E  QR+ +G+ QC  E    LLS PG+D  +G RL+ HL K
Sbjct:   103 ENLQRGHGQGGSNSPGTGFESRQRYSSGYIQCMHEVHNLLLSCPGMDKTLGARLLNHLLK 162

Query:   159 RISQSLEANPALLLSNGESFSPAGGYERDDYATLPRDARV------PSSLGSATQDSLR- 211
              +   +   P+   S G S SP           LP   +       PS   S T   +R 
Sbjct:   163 SLPH-ISTEPSGTSSAGTS-SPLPLSPTQSPINLPSSLQPHALLLSPSPPSSPTHSLVRP 220

Query:   212 ---SGVADNASSQSSAMMLPQSNPGM 234
                S    + S QS A  LP   PG+
Sbjct:   221 REQSSPPSSPSPQSPAS-LPPFFPGV 245


>FB|FBgn0002733 [details] [associations]
            symbol:E(spl)mbeta-HLH "Enhancer of split mbeta,
            helix-loop-helix" species:7227 "Drosophila melanogaster"
            [GO:0003677 "DNA binding" evidence=ISS;NAS] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEP;ISS] [GO:0005634 "nucleus" evidence=IC;NAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=TAS] [GO:0048749 "compound eye development"
            evidence=TAS] [GO:0007399 "nervous system development"
            evidence=NAS] [GO:0007219 "Notch signaling pathway" evidence=NAS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            EMBL:AE014297 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
            GO:GO:0043565 GO:GO:0007219 GO:GO:0003700 GO:GO:0006351
            GO:GO:0000122 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048749
            InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104130
            KO:K09090 EMBL:AY779906 EMBL:AY779907 EMBL:AY779908 EMBL:AY779909
            EMBL:AY779910 EMBL:AY779911 EMBL:AY779912 EMBL:AY779913
            EMBL:AY779914 EMBL:AY779915 EMBL:AY779916 EMBL:AY779917
            EMBL:AY779918 EMBL:AY779919 EMBL:AY779920 EMBL:AY779921 EMBL:M96166
            EMBL:X67047 EMBL:AY118723 PIR:C46177 RefSeq:NP_524505.2
            UniGene:Dm.4538 ProteinModelPortal:Q01069 SMR:Q01069 DIP:DIP-721N
            IntAct:Q01069 MINT:MINT-899518 STRING:Q01069 PRIDE:Q01069
            EnsemblMetazoa:FBtr0084982 GeneID:43152 KEGG:dme:Dmel_CG14548
            CTD:43152 FlyBase:FBgn0002733 eggNOG:NOG303202 InParanoid:Q01069
            OMA:STSGPMW OrthoDB:EOG4J3V0B PhylomeDB:Q01069 ChiTaRS:HLHmbeta
            GenomeRNAi:43152 NextBio:832437 Bgee:Q01069 GermOnline:CG14548
            Uniprot:Q01069
        Length = 195

 Score = 142 (55.0 bits), Expect = 5.5e-09, P = 5.5e-09
 Identities = 54/181 (29%), Positives = 82/181 (45%)

Query:    70 RITKPHDPTEE--VQRFQAEGENINKLEKADILELTVRHLHR-----------ITKPHNP 116
             RI K  D  ++  V+    EGE+I +LEKADILELTV H+ +           +T   +P
Sbjct:    28 RINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEHMKKLRAQKQLRLSSVTGGVSP 87

Query:   117 TEE-----VQRFQAGFTQCASEACGFLLSLPGLDTRVGKRLVEHLGKRISQSLEANPALL 171
             + +      + F+AG+   A+E    L ++PG+   +G +L+ HLG R++      P+L 
Sbjct:    88 SADPKLSIAESFRAGYVHAANEVSKTLAAVPGVSVDLGTQLMSHLGHRLNYLQVVVPSLP 147

Query:   172 LSNGESFSPAGGYERDDYATLPRDARVPSSLGSATQDSLRSGVADNASSQSSAMMLPQSN 231
             +       P      D     P     PS       DSL SG    A S++S+   P   
Sbjct:   148 IG-----VPLQAPVEDQAMVTPP----PSEC-----DSLESGACSPAPSEASSTSGPMWR 193

Query:   232 P 232
             P
Sbjct:   194 P 194


>UNIPROTKB|J9NV17 [details] [associations]
            symbol:HES4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104168
            EMBL:AAEX03003836 EMBL:AAEX03003832 EMBL:AAEX03003833
            EMBL:AAEX03003834 EMBL:AAEX03003835 Ensembl:ENSCAFT00000043997
            OMA:GHLATCL Uniprot:J9NV17
        Length = 157

 Score = 133 (51.9 bits), Expect = 2.7e-08, P = 2.7e-08
 Identities = 42/121 (34%), Positives = 58/121 (47%)

Query:    84 FQAEGENINKLEKADILELTVRHLH-----RITKPHNPTEEVQ-RFQAGFTQCASEACGF 137
             F+ +    +KLEKADILE+TVRHL      ++T   +    V  +++AGF +C +E   F
Sbjct:    30 FRKDSSRHSKLEKADILEMTVRHLQSLRRVQVTAALSADPAVLGKYRAGFNECLAEVNRF 89

Query:   138 LLSLPGLDTRVGKRLVEHLGKRISQ-SLEANPALLLSNGESFSP----AGGYERDDYATL 192
             L    G+   V  RL+ HL   + Q      PA      E+  P    AGG E    AT 
Sbjct:    90 LAGCEGVPAEVRSRLLGHLAACLGQLGPSRRPAPAPPAAEARGPGSCAAGGPEHAPRATP 149

Query:   193 P 193
             P
Sbjct:   150 P 150


>FB|FBgn0010109 [details] [associations]
            symbol:dpn "deadpan" species:7227 "Drosophila melanogaster"
            [GO:0008345 "larval locomotory behavior" evidence=IMP] [GO:0007549
            "dosage compensation" evidence=IMP] [GO:0008344 "adult locomotory
            behavior" evidence=IMP] [GO:0007540 "sex determination,
            establishment of X:A ratio" evidence=IGI;NAS;IMP] [GO:0005634
            "nucleus" evidence=IC;IDA] [GO:0001078 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in negative regulation of
            transcription" evidence=IDA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS;IDA]
            [GO:0003677 "DNA binding" evidence=ISS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0007530 "sex determination" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
            [GO:0007219 "Notch signaling pathway" evidence=IGI] [GO:0002052
            "positive regulation of neuroblast proliferation" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 EMBL:AE013599
            GO:GO:0005634 GO:GO:0003677 GO:GO:0001078 GO:GO:0008344
            GO:GO:0007219 GO:GO:0048813 GO:GO:0008345 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0002052 GO:GO:0007540 InterPro:IPR018352
            SMART:SM00511 EMBL:S48025 EMBL:AY071330 RefSeq:NP_476923.1
            UniGene:Dm.525 ProteinModelPortal:Q26263 SMR:Q26263 DIP:DIP-19436N
            IntAct:Q26263 MINT:MINT-314570 STRING:Q26263
            EnsemblMetazoa:FBtr0088803 GeneID:35800 KEGG:dme:Dmel_CG8704
            UCSC:CG8704-RA CTD:35800 FlyBase:FBgn0010109 eggNOG:NOG319418
            GeneTree:ENSGT00700000104130 InParanoid:Q26263 KO:K09090
            OMA:CAEEVNR OrthoDB:EOG4M37RH PhylomeDB:Q26263 GenomeRNAi:35800
            NextBio:795271 Bgee:Q26263 GermOnline:CG8704 GO:GO:0007549
            Uniprot:Q26263
        Length = 435

 Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
 Identities = 65/239 (27%), Positives = 104/239 (43%)

Query:    93 KLEKADILELTVRHLHRITKPH------NPTEEVQRFQAGFTQCASEACGFLLSLPGLDT 146
             KLEKADILE+TV+HL  + +        +    VQ+F+ GF +CA E   ++  + G+DT
Sbjct:    80 KLEKADILEMTVKHLQSVQRQQLNMAIQSDPSVVQKFKTGFVECAEEVNRYVSQMDGIDT 139

Query:   147 RVGKRLVEHLGKRISQSLEANPALL-LSNGE--SFSPAGGYERDD---YATLPRD----A 196
              V +RL  HL +  + SLE   ++   SNG      PA          + +LP+D    +
Sbjct:   140 GVRQRLSAHLNQ-CANSLEQIGSMSNFSNGYRGGLFPATAVTAAPTPLFPSLPQDLNNNS 198

Query:   197 RVPSSLGSATQDSLRSGVADNASSQSSAMMLPQSN-----PGMSLNLPNSS--LHPYTCD 249
             R  SS  +     L+  +     S   A+++P +      PG     P S+  +   T  
Sbjct:   199 RTESSAPAIQMGGLQL-IPSRLPSGEFALIMPNTGSAAPPPG-PFAWPGSAAGVAAGTAS 256

Query:   250 EATLHVVG-VRMGDYVGNRVLLAFTGHTQTG-PINYMKNEITNDRQLVQCMISDGSCPP 306
              A   +     + DY  +  + AF+    T  P N  +N I       Q  + + + PP
Sbjct:   257 AALASIANPTHLNDYTQSFRMSAFSKPVNTSVPANLPENLIHTLPGQTQLPVKNSTSPP 315


>UNIPROTKB|Q9Y543 [details] [associations]
            symbol:HES2 "Transcription factor HES-2" species:9606 "Homo
            sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008134 "transcription
            factor binding" evidence=NAS] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0045892 EMBL:CH471130
            GO:GO:0006351 GO:GO:0003690 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 EMBL:AL031848 InterPro:IPR018352 SMART:SM00511
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 EMBL:AK091122 EMBL:BC012091
            EMBL:BC132698 EMBL:BC136963 EMBL:BC142687 IPI:IPI00001055
            IPI:IPI00061562 RefSeq:NP_061962.2 UniGene:Hs.118727
            ProteinModelPortal:Q9Y543 SMR:Q9Y543 STRING:Q9Y543
            PhosphoSite:Q9Y543 DMDM:12643954 PRIDE:Q9Y543
            Ensembl:ENST00000377834 Ensembl:ENST00000377836
            Ensembl:ENST00000377837 GeneID:54626 KEGG:hsa:54626 UCSC:uc001amw.3
            UCSC:uc001amx.3 CTD:54626 GeneCards:GC01M006406 HGNC:HGNC:16005
            HPA:HPA039462 MIM:609970 neXtProt:NX_Q9Y543 PharmGKB:PA134958805
            eggNOG:NOG259850 InParanoid:Q9Y543 KO:K09087 OMA:EGYSACV
            PhylomeDB:Q9Y543 GenomeRNAi:54626 NextBio:57166 ArrayExpress:Q9Y543
            Bgee:Q9Y543 CleanEx:HS_HES2 Genevestigator:Q9Y543
            GermOnline:ENSG00000069812 Uniprot:Q9Y543
        Length = 173

 Score = 128 (50.1 bits), Expect = 9.5e-08, P = 9.5e-08
 Identities = 39/118 (33%), Positives = 56/118 (47%)

Query:    87 EGENINKLEKADILELTVRHLHRITKPHNPTEE---VQRFQAGFTQCASEACGFLLSLPG 143
             E  N +KLEKAD+LE+TVR L  +     PT        ++ G++ C +     L +   
Sbjct:    47 ENSNCSKLEKADVLEMTVRFLQELPASSWPTAAPLPCDSYREGYSACVARLARVLPACRV 106

Query:   144 LDTRVGKRLVEHLGKRI-SQSLEANPALLLSNGESFSPAGGYERDDYATLPRDARVPS 200
             L+  V  RL+EHL +R  S +L+   A     G+S  P+        A  P  A VPS
Sbjct:   107 LEPAVSARLLEHLWRRAASATLDGGRA-----GDSSGPSAPAPAPASAPEPASAPVPS 159


>UNIPROTKB|E1C412 [details] [associations]
            symbol:HES6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0007399 "nervous system
            development" evidence=IEA] [GO:0030154 "cell differentiation"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006357
            GO:GO:0006351 GO:GO:0005667 GO:GO:0003712 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GeneTree:ENSGT00700000104130 KO:K09087 CTD:55502
            EMBL:AADN02024211 IPI:IPI00595723 RefSeq:XP_422641.3
            UniGene:Gga.2703 Ensembl:ENSGALT00000008864 GeneID:424829
            KEGG:gga:424829 ArrayExpress:E1C412 Uniprot:E1C412
        Length = 227

 Score = 138 (53.6 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 37/96 (38%), Positives = 50/96 (52%)

Query:    92 NKLEKADILELTVRHLHRITKPHNPT------EEVQRFQAGFTQCASEACGFLLSLPGLD 145
             +KLEKADILE+TV+HL  I             E  QR+  G+ QC  E    LL+   +D
Sbjct:    55 SKLEKADILEMTVKHLQNIQNSKLMADSKVGLEAQQRYSTGYIQCMHEVHNLLLTCEWMD 114

Query:   146 TRVGKRLVEHLGKRISQSLE-ANPALLLSNGESFSP 180
               +G RL+ HL K + +S E  + A L S+  S  P
Sbjct:   115 KTLGARLLNHLLKSLPRSSEDTSKAALSSSSPSQQP 150


>UNIPROTKB|E1C2Y3 [details] [associations]
            symbol:HES6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104130 EMBL:AADN02024211 IPI:IPI00819473
            Ensembl:ENSGALT00000040988 OMA:SINIRRR ArrayExpress:E1C2Y3
            Uniprot:E1C2Y3
        Length = 182

 Score = 128 (50.1 bits), Expect = 7.6e-07, P = 7.6e-07
 Identities = 33/82 (40%), Positives = 46/82 (56%)

Query:    92 NKLEKADILELTVRHLHRI--TKPHNPT------EEVQRFQAGFTQCASEACGFLLSLPG 143
             +KLEKADILE+TV+HL  I  +K  +        E  QR+  G+ QC  E    LL+   
Sbjct:    54 SKLEKADILEMTVKHLQNIQNSKLMDTADSKVGLEAQQRYSTGYIQCMHEVHNLLLTCEW 113

Query:   144 LDTRVGKRLVEHLGKRISQSLE 165
             +D  +G RL+ HL K + +S E
Sbjct:   114 MDKTLGARLLNHLLKSLPRSSE 135


>RGD|62081 [details] [associations]
            symbol:Hes1 "hairy and enhancer of split 1 (Drosophila)"
           species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
           of transcription from RNA polymerase II promoter"
           evidence=ISO;IDA;IMP] [GO:0000981 "sequence-specific DNA binding RNA
           polymerase II transcription factor activity" evidence=ISO]
           [GO:0001078 "RNA polymerase II core promoter proximal region
           sequence-specific DNA binding transcription factor activity involved
           in negative regulation of transcription" evidence=ISO;ISS]
           [GO:0001701 "in utero embryonic development" evidence=ISO]
           [GO:0001889 "liver development" evidence=ISO] [GO:0003143 "embryonic
           heart tube morphogenesis" evidence=ISO] [GO:0003151 "outflow tract
           morphogenesis" evidence=ISO] [GO:0003266 "regulation of secondary
           heart field cardioblast proliferation" evidence=ISO] [GO:0003281
           "ventricular septum development" evidence=ISO] [GO:0003677 "DNA
           binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
           binding transcription factor activity" evidence=ISO] [GO:0005515
           "protein binding" evidence=IPI] [GO:0005622 "intracellular"
           evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO;ISS]
           [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
           evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
           evidence=IEA] [GO:0006355 "regulation of transcription,
           DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
           transcription from RNA polymerase II promoter" evidence=ISO]
           [GO:0006461 "protein complex assembly" evidence=ISO;ISS] [GO:0007155
           "cell adhesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
           evidence=ISO] [GO:0007224 "smoothened signaling pathway"
           evidence=ISO] [GO:0007262 "STAT protein import into nucleus"
           evidence=ISO;ISS] [GO:0007389 "pattern specification process"
           evidence=ISO] [GO:0008284 "positive regulation of cell
           proliferation" evidence=ISO] [GO:0016477 "cell migration"
           evidence=ISO] [GO:0021537 "telencephalon development" evidence=ISO]
           [GO:0021555 "midbrain-hindbrain boundary morphogenesis"
           evidence=ISO] [GO:0021557 "oculomotor nerve development"
           evidence=ISO] [GO:0021558 "trochlear nerve development"
           evidence=ISO] [GO:0021575 "hindbrain morphogenesis" evidence=ISO]
           [GO:0021861 "forebrain radial glial cell differentiation"
           evidence=IDA] [GO:0021915 "neural tube development" evidence=ISO]
           [GO:0021983 "pituitary gland development" evidence=ISO] [GO:0021984
           "adenohypophysis development" evidence=ISO] [GO:0030324 "lung
           development" evidence=ISO] [GO:0030513 "positive regulation of BMP
           signaling pathway" evidence=ISO] [GO:0030901 "midbrain development"
           evidence=ISO] [GO:0031016 "pancreas development" evidence=ISO]
           [GO:0035019 "somatic stem cell maintenance" evidence=ISO]
           [GO:0035909 "aorta morphogenesis" evidence=ISO] [GO:0035910
           "ascending aorta morphogenesis" evidence=ISO] [GO:0042102 "positive
           regulation of T cell proliferation" evidence=ISO] [GO:0042491
           "auditory receptor cell differentiation" evidence=ISO] [GO:0042517
           "positive regulation of tyrosine phosphorylation of Stat3 protein"
           evidence=ISO;ISS] [GO:0042668 "auditory receptor cell fate
           determination" evidence=ISO] [GO:0042803 "protein homodimerization
           activity" evidence=ISO;ISS] [GO:0042826 "histone deacetylase
           binding" evidence=ISO] [GO:0043388 "positive regulation of DNA
           binding" evidence=ISO;ISS] [GO:0043565 "sequence-specific DNA
           binding" evidence=IDA] [GO:0045165 "cell fate commitment"
           evidence=ISO] [GO:0045596 "negative regulation of cell
           differentiation" evidence=ISO] [GO:0045598 "regulation of fat cell
           differentiation" evidence=ISO] [GO:0045608 "negative regulation of
           auditory receptor cell differentiation" evidence=ISO] [GO:0045665
           "negative regulation of neuron differentiation" evidence=ISO]
           [GO:0045747 "positive regulation of Notch signaling pathway"
           evidence=ISO] [GO:0045892 "negative regulation of transcription,
           DNA-dependent" evidence=ISO;IDA] [GO:0045893 "positive regulation of
           transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
           regulation of transcription from RNA polymerase II promoter"
           evidence=ISO] [GO:0045977 "positive regulation of mitotic cell
           cycle, embryonic" evidence=ISO] [GO:0046331 "lateral inhibition"
           evidence=ISO] [GO:0046427 "positive regulation of JAK-STAT cascade"
           evidence=ISO;ISS] [GO:0046983 "protein dimerization activity"
           evidence=IEA] [GO:0048469 "cell maturation" evidence=ISO]
           [GO:0048505 "regulation of timing of cell differentiation"
           evidence=ISO] [GO:0048538 "thymus development" evidence=ISO]
           [GO:0048667 "cell morphogenesis involved in neuron differentiation"
           evidence=ISO] [GO:0048711 "positive regulation of astrocyte
           differentiation" evidence=ISO;ISS] [GO:0048715 "negative regulation
           of oligodendrocyte differentiation" evidence=ISO;ISS] [GO:0048844
           "artery morphogenesis" evidence=ISO] [GO:0050767 "regulation of
           neurogenesis" evidence=ISO] [GO:0060037 "pharyngeal system
           development" evidence=ISO] [GO:0060164 "regulation of timing of
           neuron differentiation" evidence=ISO] [GO:0060253 "negative
           regulation of glial cell proliferation" evidence=ISO;ISS]
           [GO:0060412 "ventricular septum morphogenesis" evidence=ISO]
           [GO:0060716 "labyrinthine layer blood vessel development"
           evidence=ISO] [GO:0061009 "common bile duct development"
           evidence=ISO] [GO:0061106 "negative regulation of stomach
           neuroendocrine cell differentiation" evidence=ISO] [GO:0061309
           "cardiac neural crest cell development involved in outflow tract
           morphogenesis" evidence=ISO] [GO:0071820 "N-box binding"
           evidence=ISO;ISS] [GO:0090102 "cochlea development" evidence=ISO]
           [GO:0097084 "vascular smooth muscle cell development" evidence=ISO]
           [GO:0097150 "neuronal stem cell maintenance" evidence=ISO;IDA]
           [GO:2000227 "negative regulation of pancreatic A cell
           differentiation" evidence=ISO] [GO:2000737 "negative regulation of
           stem cell differentiation" evidence=ISO] [GO:2000974 "negative
           regulation of pro-B cell differentiation" evidence=ISO;ISS]
           [GO:2000978 "negative regulation of forebrain neuron
           differentiation" evidence=IDA] [GO:2000981 "negative regulation of
           inner ear receptor cell differentiation" evidence=ISO]
           InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
           PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 RGD:62081
           GO:GO:0042803 GO:GO:0005654 GO:GO:0006461 GO:GO:0001078
           GO:GO:0043565 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042517
           InterPro:IPR018352 SMART:SM00511 GO:GO:0048711 GO:GO:0048715
           GO:GO:0043388 GO:GO:0097150 eggNOG:NOG319418 GO:GO:0007262
           GO:GO:0060253 GO:GO:0021861 KO:K06054 CTD:3280 HOVERGEN:HBG005960
           GO:GO:0071820 GO:GO:2000978 GO:GO:2000974 EMBL:D13417 EMBL:L04527
           EMBL:BC061730 IPI:IPI00188114 PIR:S36748 RefSeq:NP_077336.3
           UniGene:Rn.19727 ProteinModelPortal:Q04666 STRING:Q04666
           PhosphoSite:Q04666 GeneID:29577 KEGG:rno:29577 UCSC:RGD:62081
           NextBio:609674 Genevestigator:Q04666 Uniprot:Q04666
        Length = 281

 Score = 137 (53.3 bits), Expect = 9.3e-07, P = 9.3e-07
 Identities = 48/167 (28%), Positives = 81/167 (48%)

Query:    92 NKLEKADILELTVRHLHRITKPHNP----TEE--VQRFQAGFTQCASEACGFLLSLPGLD 145
             +KLEKADILE+TV+HL  + +        T+   + +++AGF++C +E   FL +  G++
Sbjct:    73 SKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTCEGVN 132

Query:   146 TRVGKRLVEHLGKRISQ--SL----EANPALLLSNGESFSPAGGYERDDYATLPRDARVP 199
             T V  RL+ HL   ++Q  ++    +A+PAL        S  GG +   +A  P    +P
Sbjct:   133 TEVRTRLLGHLANCMTQINAMTYPGQAHPALQAPPPPPPSGPGGPQHAPFAPPPPLVPIP 192

Query:   200 SSL----GSATQDSLRSGVADNASSQSSAMMLPQSNPGMSLNLPNSS 242
                    GSA    L S   + A       ++P  +   +  +PN +
Sbjct:   193 GGAAPPPGSAPC-KLGSQAGEAAKVFGGFQVVPAPDGQFAFLIPNGA 238


>ZFIN|ZDB-GENE-011213-1 [details] [associations]
            symbol:her9 "hairy-related 9" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0050768 "negative regulation of neurogenesis" evidence=IMP]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 ZFIN:ZDB-GENE-011213-1 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0050768 InterPro:IPR018352 SMART:SM00511
            GeneTree:ENSGT00700000104168 KO:K06054 HOVERGEN:HBG005960
            OMA:HTPDKPK EMBL:CR751236 EMBL:AF301264 EMBL:BC079516
            IPI:IPI00506831 RefSeq:NP_571948.1 UniGene:Dr.78757 STRING:Q9DF41
            Ensembl:ENSDART00000078936 GeneID:140613 KEGG:dre:140613 CTD:140613
            InParanoid:Q9DF41 NextBio:20797024 Uniprot:Q9DF41
        Length = 291

 Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 30/82 (36%), Positives = 47/82 (57%)

Query:    92 NKLEKADILELTVRHLHRITKPHNP------TEEVQRFQAGFTQCASEACGFLLSLPGLD 145
             +KLEKADILE+TV+HL  + +          T  + +++AGF +C +E   FL +  G++
Sbjct:    73 SKLEKADILEMTVKHLRNLQRVQMSAALSADTNVLSKYRAGFNECMNEVTRFLSTCEGVN 132

Query:   146 TRVGKRLVEHLGKRISQSLEAN 167
             T V  RL+ HL   + Q +  N
Sbjct:   133 TEVRSRLLNHLSGCMGQMMAMN 154


>ZFIN|ZDB-GENE-060815-4 [details] [associations]
            symbol:her8.2 "hairy-related 8.2" species:7955 "Danio
            rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-060815-4 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG241578
            HOGENOM:HOG000236346 HOVERGEN:HBG107098 OrthoDB:EOG4G7C0H
            EMBL:BC117621 IPI:IPI00952513 UniGene:Dr.86703 InParanoid:Q1ECY5
            Uniprot:Q1ECY5
        Length = 223

 Score = 131 (51.2 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 32/77 (41%), Positives = 42/77 (54%)

Query:    92 NKLEKADILELTVRHLH-----RITKPHNPTEEVQRFQAGFTQCASEACGFLLSLPGLDT 146
             +KLEKADILE+TV+HL      R++ P   T   QR+  G+ QC  E    L S   +D 
Sbjct:    70 SKLEKADILEMTVKHLQNIQSSRVSDPVLNTGARQRYSTGYIQCMQEVHNLLHSCDWMDK 129

Query:   147 RVGKRLVEHLGKRISQS 163
              +G RL  HL K +  S
Sbjct:   130 TLGSRLFNHLFKSLPLS 146


>UNIPROTKB|Q90Z12 [details] [associations]
            symbol:hes4-a "Transcription factor HES-4-A" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0002088 "lens
            development in camera-type eye" evidence=IMP] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0008283 "cell proliferation" evidence=IMP]
            [GO:0014029 "neural crest formation" evidence=IMP] [GO:0021501
            "prechordal plate formation" evidence=IMP] [GO:0030509 "BMP
            signaling pathway" evidence=IMP] [GO:0033504 "floor plate
            development" evidence=IMP] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IMP] [GO:0043425 "bHLH transcription
            factor binding" evidence=IPI] [GO:0043565 "sequence-specific DNA
            binding" evidence=IDA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IMP] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0043066
            GO:GO:0008283 GO:GO:0043565 GO:GO:0006351 GO:GO:0000122
            GO:GO:0030509 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GO:GO:0002088 GO:GO:0033504 GO:GO:0021501
            GO:GO:0014029 KO:K06054 EMBL:AF383159 EMBL:AF139914 EMBL:BC071075
            EMBL:AF022798 RefSeq:NP_001082574.1 UniGene:Xl.25977 GeneID:398579
            KEGG:xla:398579 CTD:398579 Xenbase:XB-GENE-6256031 Uniprot:Q90Z12
        Length = 281

 Score = 130 (50.8 bits), Expect = 6.0e-06, P = 6.0e-06
 Identities = 30/82 (36%), Positives = 48/82 (58%)

Query:    92 NKLEKADILELTVRHLHRITKPHNP---TEE---VQRFQAGFTQCASEACGFLLSLPGLD 145
             +KLEKADILE+TV+HL  + +       T +   + +++AGF +C +E   FL +  G++
Sbjct:    73 SKLEKADILEMTVKHLRNLQRVQMTAALTSDPSVLGKYRAGFNECTNEVTRFLSTCEGVN 132

Query:   146 TRVGKRLVEHLGKRISQSLEAN 167
             T V  RL+ HL   + Q +  N
Sbjct:   133 TEVRTRLLGHLSSCLGQIVAMN 154


>ZFIN|ZDB-GENE-980526-144 [details] [associations]
            symbol:her6 "hairy-related 6" species:7955 "Danio
            rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001757
            "somite specification" evidence=IMP] [GO:0009952
            "anterior/posterior pattern specification" evidence=IMP]
            [GO:0007219 "Notch signaling pathway" evidence=IMP] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0021794 "thalamus development" evidence=IMP]
            [GO:0045664 "regulation of neuron differentiation" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-980526-144 GO:GO:0005634 GO:GO:0045664 GO:GO:0006355
            GO:GO:0003677 GO:GO:0007219 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511 GO:GO:0021794
            GO:GO:0001757 KO:K06054 HOGENOM:HOG000236346 HOVERGEN:HBG005960
            EMBL:X97333 IPI:IPI00511507 RefSeq:NP_571154.1 UniGene:Dr.75065
            ProteinModelPortal:Q90468 STRING:Q90468 GeneID:30288 KEGG:dre:30288
            CTD:30288 InParanoid:Q90468 NextBio:20806731 ArrayExpress:Q90468
            Uniprot:Q90468
        Length = 334

 Score = 131 (51.2 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 47/165 (28%), Positives = 81/165 (49%)

Query:    92 NKLEKADILELTVRHLHRITKPH-------NPTEEVQRFQAGFTQCASEACGFLLSLPGL 144
             +KLEKADILE+TV+HL  + +         +PT  + +++AGF++C +E   FL +  G+
Sbjct:   137 SKLEKADILEMTVKHLRNMQRAQMTAALNTDPTV-LGKYRAGFSECMNEVTRFLSTCEGV 195

Query:   145 DTRVGKRLVEHLGKRISQSLEAN-PAL-LLSNGESFSPA-GGYERDDYATLPRDARVPSS 201
             +T V  RL+ HL   ++Q    N P    +  G    P+   + +   AT   +  VP S
Sbjct:   196 NTEVRTRLLGHLASCMTQINAMNYPTQHQILPGLLIHPSVNPWFKIPSATQQANV-VPLS 254

Query:   202 LGSATQDSLRSGVADNASSQSSAMML-PQSNPGMSLNLPNSSLHP 245
              G   +    S +  +A+       L P ++   +  +PN++  P
Sbjct:   255 -GVPCKSGSSSNLTSDATKVYGGFQLVPATDGQFAFLIPNAAFAP 298


>UNIPROTKB|Q90VV1 [details] [associations]
            symbol:hes4-b "Transcription factor HES-4-B" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0002088 "lens
            development in camera-type eye" evidence=IMP] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0008283 "cell proliferation" evidence=IMP] [GO:0014029 "neural
            crest formation" evidence=IMP] [GO:0021501 "prechordal plate
            formation" evidence=IMP] [GO:0033504 "floor plate development"
            evidence=IMP] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IPI] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0046982 "protein
            heterodimerization activity" evidence=IPI] [GO:0048642 "negative
            regulation of skeletal muscle tissue development" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0043066 GO:GO:0008283 GO:GO:0043565 GO:GO:0007219
            GO:GO:0006351 GO:GO:0000122 GO:GO:0007517 Gene3D:4.10.280.10
            SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511 GO:GO:0002088
            GO:GO:0033504 GO:GO:0048642 GO:GO:0021501 GO:GO:0014029 KO:K06054
            EMBL:AF383160 EMBL:BC070547 EMBL:AF356000 RefSeq:NP_001082161.1
            UniGene:Xl.86822 ProteinModelPortal:Q90VV1 GeneID:398258
            KEGG:xla:398258 CTD:398258 Xenbase:XB-GENE-865740 Uniprot:Q90VV1
        Length = 277

 Score = 128 (50.1 bits), Expect = 9.8e-06, P = 9.8e-06
 Identities = 30/82 (36%), Positives = 48/82 (58%)

Query:    92 NKLEKADILELTVRHLHRITKPHNP---TEE---VQRFQAGFTQCASEACGFLLSLPGLD 145
             +KLEKADILE+TV+HL  + +       T +   + +++AGF +C +E   FL +  G++
Sbjct:    73 SKLEKADILEMTVKHLRNLQRVQMTAALTADPSVLGKYRAGFNECMNEVTRFLSTCEGVN 132

Query:   146 TRVGKRLVEHLGKRISQSLEAN 167
             T V  RL+ HL   + Q +  N
Sbjct:   133 TEVRTRLLGHLSSCLGQIVAMN 154


>UNIPROTKB|Q6PBD4 [details] [associations]
            symbol:hes4 "Transcription factor HES-4" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0002088 "lens development in camera-type eye" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0008283 "cell
            proliferation" evidence=ISS] [GO:0014029 "neural crest formation"
            evidence=ISS] [GO:0021501 "prechordal plate formation"
            evidence=ISS] [GO:0033504 "floor plate development" evidence=ISS]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0046982 "protein
            heterodimerization activity" evidence=ISS] [GO:0048642 "negative
            regulation of skeletal muscle tissue development" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0043066 GO:GO:0008283 GO:GO:0043565 GO:GO:0007219
            GO:GO:0006351 GO:GO:0000122 GO:GO:0007517 GO:GO:0046982
            Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
            GO:GO:0002088 GO:GO:0033504 GO:GO:0048642 eggNOG:NOG319418
            GO:GO:0021501 GO:GO:0014029 GeneTree:ENSGT00700000104168 KO:K06054
            HOGENOM:HOG000236346 OrthoDB:EOG4TTGK6 CTD:57801 EMBL:AC151819
            EMBL:CR760275 EMBL:BC059761 RefSeq:NP_988870.1 UniGene:Str.6018
            ProteinModelPortal:Q6PBD4 STRING:Q6PBD4 Ensembl:ENSXETT00000003678
            GeneID:394465 KEGG:xtr:394465 Xenbase:XB-GENE-487830
            InParanoid:Q6PBD4 Bgee:Q6PBD4 Uniprot:Q6PBD4
        Length = 281

 Score = 128 (50.1 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 30/82 (36%), Positives = 48/82 (58%)

Query:    92 NKLEKADILELTVRHLHRITKPHNP---TEE---VQRFQAGFTQCASEACGFLLSLPGLD 145
             +KLEKADILE+TV+HL  + +       T +   + +++AGF +C +E   FL +  G++
Sbjct:    73 SKLEKADILEMTVKHLRNLQRVQMTAALTADPSVLGKYRAGFNECMNEVTRFLSTCEGVN 132

Query:   146 TRVGKRLVEHLGKRISQSLEAN 167
             T V  RL+ HL   + Q +  N
Sbjct:   133 TEVRTRLLGHLSSCLGQIVAMN 154


>MGI|MGI:104853 [details] [associations]
            symbol:Hes1 "hairy and enhancer of split 1 (Drosophila)"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter"
            evidence=ISO;IGI;IMP;IDA] [GO:0000981 "sequence-specific DNA
            binding RNA polymerase II transcription factor activity"
            evidence=IDA] [GO:0001078 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IDA]
            [GO:0001701 "in utero embryonic development" evidence=IGI]
            [GO:0001889 "liver development" evidence=IMP] [GO:0003143
            "embryonic heart tube morphogenesis" evidence=IMP] [GO:0003151
            "outflow tract morphogenesis" evidence=IMP] [GO:0003266 "regulation
            of secondary heart field cardioblast proliferation" evidence=IMP]
            [GO:0003281 "ventricular septum development" evidence=IMP]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IGI] [GO:0006461 "protein complex assembly"
            evidence=IDA] [GO:0007155 "cell adhesion" evidence=IGI] [GO:0007219
            "Notch signaling pathway" evidence=ISO;NAS;TAS] [GO:0007224
            "smoothened signaling pathway" evidence=IDA] [GO:0007262 "STAT
            protein import into nucleus" evidence=IDA] [GO:0007389 "pattern
            specification process" evidence=IGI;IMP] [GO:0008134 "transcription
            factor binding" evidence=NAS] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IMP] [GO:0016477 "cell migration"
            evidence=IGI] [GO:0021537 "telencephalon development"
            evidence=IGI;IMP] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IGI] [GO:0021557 "oculomotor nerve
            development" evidence=IGI] [GO:0021558 "trochlear nerve
            development" evidence=IGI] [GO:0021575 "hindbrain morphogenesis"
            evidence=IGI] [GO:0021861 "forebrain radial glial cell
            differentiation" evidence=ISO] [GO:0021915 "neural tube
            development" evidence=IGI] [GO:0021983 "pituitary gland
            development" evidence=IGI;IMP] [GO:0021984 "adenohypophysis
            development" evidence=IMP] [GO:0030324 "lung development"
            evidence=IMP] [GO:0030513 "positive regulation of BMP signaling
            pathway" evidence=IGI] [GO:0030901 "midbrain development"
            evidence=IGI] [GO:0031016 "pancreas development" evidence=IMP]
            [GO:0035019 "somatic stem cell maintenance" evidence=IMP]
            [GO:0035909 "aorta morphogenesis" evidence=IMP] [GO:0035910
            "ascending aorta morphogenesis" evidence=IMP] [GO:0042102 "positive
            regulation of T cell proliferation" evidence=IMP] [GO:0042491
            "auditory receptor cell differentiation" evidence=IMP] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IDA] [GO:0042668 "auditory receptor cell fate
            determination" evidence=IMP] [GO:0042803 "protein homodimerization
            activity" evidence=IDA] [GO:0042826 "histone deacetylase binding"
            evidence=ISO] [GO:0043388 "positive regulation of DNA binding"
            evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0045165 "cell fate commitment" evidence=IMP]
            [GO:0045596 "negative regulation of cell differentiation"
            evidence=IMP] [GO:0045598 "regulation of fat cell differentiation"
            evidence=IMP] [GO:0045608 "negative regulation of auditory receptor
            cell differentiation" evidence=IMP] [GO:0045665 "negative
            regulation of neuron differentiation" evidence=IGI;IMP] [GO:0045747
            "positive regulation of Notch signaling pathway" evidence=IMP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISO;IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IGI;IMP] [GO:0045977 "positive regulation of mitotic cell
            cycle, embryonic" evidence=IMP] [GO:0046331 "lateral inhibition"
            evidence=IMP] [GO:0046427 "positive regulation of JAK-STAT cascade"
            evidence=IDA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0048469 "cell maturation" evidence=IGI]
            [GO:0048505 "regulation of timing of cell differentiation"
            evidence=IMP] [GO:0048538 "thymus development" evidence=IMP]
            [GO:0048667 "cell morphogenesis involved in neuron differentiation"
            evidence=IGI] [GO:0048711 "positive regulation of astrocyte
            differentiation" evidence=IDA] [GO:0048715 "negative regulation of
            oligodendrocyte differentiation" evidence=IDA] [GO:0048844 "artery
            morphogenesis" evidence=IMP] [GO:0050767 "regulation of
            neurogenesis" evidence=IGI] [GO:0060037 "pharyngeal system
            development" evidence=IMP] [GO:0060164 "regulation of timing of
            neuron differentiation" evidence=IGI;IMP] [GO:0060253 "negative
            regulation of glial cell proliferation" evidence=IDA] [GO:0060412
            "ventricular septum morphogenesis" evidence=IMP] [GO:0060716
            "labyrinthine layer blood vessel development" evidence=IMP]
            [GO:0061009 "common bile duct development" evidence=IMP]
            [GO:0061106 "negative regulation of stomach neuroendocrine cell
            differentiation" evidence=IMP] [GO:0061309 "cardiac neural crest
            cell development involved in outflow tract morphogenesis"
            evidence=IMP] [GO:0071820 "N-box binding" evidence=IDA] [GO:0090102
            "cochlea development" evidence=IGI;IMP] [GO:0097084 "vascular
            smooth muscle cell development" evidence=IMP] [GO:0097150 "neuronal
            stem cell maintenance" evidence=ISO;IMP] [GO:2000227 "negative
            regulation of pancreatic A cell differentiation" evidence=IMP]
            [GO:2000737 "negative regulation of stem cell differentiation"
            evidence=ISO] [GO:2000974 "negative regulation of pro-B cell
            differentiation" evidence=ISO] [GO:2000978 "negative regulation of
            forebrain neuron differentiation" evidence=ISO] [GO:2000981
            "negative regulation of inner ear receptor cell differentiation"
            evidence=IMP] Reactome:REACT_13641 InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 MGI:MGI:104853 GO:GO:0005737
            GO:GO:0042803 GO:GO:0005654 GO:GO:0016477 GO:GO:0006461
            GO:GO:0030324 GO:GO:0001078 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007155 GO:GO:0007219 GO:GO:0001889 GO:GO:0045747
            Reactome:REACT_127416 GO:GO:0030901 GO:GO:0030513 GO:GO:0003143
            GO:GO:0060037 GO:GO:0042102 GO:GO:0097084 GO:GO:0046331
            GO:GO:0048538 GO:GO:0035019 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 GO:GO:0031018 GO:GO:0060716 GO:GO:0045598
            GO:GO:0072012 GO:GO:0003151 GO:GO:0007224 GO:GO:0042517
            GO:GO:0021984 GO:GO:0021575 GO:GO:0090102 GO:GO:0042668
            GO:GO:0048469 InterPro:IPR018352 SMART:SM00511 GO:GO:0048711
            GO:GO:0021537 GO:GO:0060675 GO:GO:0048715 GO:GO:0043388
            GO:GO:0060412 GO:GO:0003266 GO:GO:0045608 GO:GO:0097150
            eggNOG:NOG319418 GO:GO:0048667 GO:GO:0007262 GO:GO:0060253
            GO:GO:0021555 GO:GO:0021861 GO:GO:0061309 KO:K06054 CTD:3280
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 OrthoDB:EOG4TTGK6
            GO:GO:0071820 GO:GO:2000978 GO:GO:2000974 OMA:TKVYGGF GO:GO:0035910
            GO:GO:0072049 GO:GO:0061009 GO:GO:0072282 GO:GO:2000227
            GO:GO:2000737 GO:GO:0061106 GO:GO:0021557 GO:GO:0045977
            GO:GO:0060164 GO:GO:0072141 GO:GO:0072050 GO:GO:0021558 EMBL:D16464
            EMBL:BC018375 EMBL:BC051428 IPI:IPI00118341 PIR:A53336
            RefSeq:NP_032261.1 UniGene:Mm.390859 ProteinModelPortal:P35428
            SMR:P35428 STRING:P35428 PhosphoSite:P35428 PRIDE:P35428
            Ensembl:ENSMUST00000023171 GeneID:15205 KEGG:mmu:15205
            InParanoid:P35428 Reactome:REACT_118814 ChEMBL:CHEMBL1075292
            NextBio:287757 Bgee:P35428 CleanEx:MM_HES1 Genevestigator:P35428
            GermOnline:ENSMUSG00000022528 Uniprot:P35428
        Length = 282

 Score = 128 (50.1 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 41/126 (32%), Positives = 67/126 (53%)

Query:    92 NKLEKADILELTVRHLHRITKPHNP----TEE--VQRFQAGFTQCASEACGFLLSLPGLD 145
             +KLEKADILE+TV+HL  + +        T+   + +++AGF++C +E   FL +  G++
Sbjct:    73 SKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTCEGVN 132

Query:   146 TRVGKRLVEHLGKRISQ--SL----EANPALLLSNGESFSPAGGYERDDYATLPRDARVP 199
             T V  RL+ HL   ++Q  ++    +A+PAL        S   G +   +A  P    VP
Sbjct:   133 TEVRTRLLGHLANCMTQINAMTYPGQAHPALQAPPPPPPSGPAGPQHAPFAP-PPPPLVP 191

Query:   200 SSLGSA 205
                G+A
Sbjct:   192 IPGGAA 197


>UNIPROTKB|Q8AVU4 [details] [associations]
            symbol:hes1-b "Transcription factor HES-1-B" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0007219 "Notch signaling pathway"
            evidence=ISS] [GO:0043425 "bHLH transcription factor binding"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0046982 "protein
            heterodimerization activity" evidence=ISS] [GO:0048635 "negative
            regulation of muscle organ development" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003677 GO:GO:0007219 GO:GO:0006351
            GO:GO:0000122 GO:GO:0046982 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GO:GO:0043425 KO:K06054
            GO:GO:0048635 EMBL:BC041261 EMBL:BC128932 RefSeq:NP_001079386.1
            UniGene:Xl.972 ProteinModelPortal:Q8AVU4 GeneID:379073
            KEGG:xla:379073 CTD:379073 Xenbase:XB-GENE-6256448 Uniprot:Q8AVU4
        Length = 267

 Score = 127 (49.8 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 32/85 (37%), Positives = 51/85 (60%)

Query:    92 NKLEKADILELTVRHLHRITKPHNP----TEE--VQRFQAGFTQCASEACGFLLSLPGLD 145
             +KLEKADILE+TV+HL  + +        T+   + +++AGF++C +E   FL +  G++
Sbjct:    73 SKLEKADILEMTVKHLRNLQRVQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTCEGVN 132

Query:   146 TRVGKRLVEHLGKRISQSLEAN-PA 169
             T V  RL+ HL   ++Q    N PA
Sbjct:   133 TDVRTRLLGHLANCVNQIHAMNYPA 157


>UNIPROTKB|J9NTM5 [details] [associations]
            symbol:HES4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104168
            EMBL:AAEX03003836 EMBL:AAEX03003832 EMBL:AAEX03003833
            EMBL:AAEX03003834 EMBL:AAEX03003835 Ensembl:ENSCAFT00000049600
            Uniprot:J9NTM5
        Length = 214

 Score = 124 (48.7 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 31/85 (36%), Positives = 46/85 (54%)

Query:    84 FQAEGENINKLEKADILELTVRHLH-----RITKPHNPTEEVQ-RFQAGFTQCASEACGF 137
             F+ +    +KLEKADILE+TVRHL      ++T   +    V  +++AGF +C +E   F
Sbjct:    65 FRKDSSRHSKLEKADILEMTVRHLQSLRRVQVTAALSADPAVLGKYRAGFNECLAEVNRF 124

Query:   138 LLSLPGLDTRVGKRLVEHLGKRISQ 162
             L    G+   V  RL+ HL   + Q
Sbjct:   125 LAGCEGVPAEVRSRLLGHLAACLGQ 149


>UNIPROTKB|Q3ZBG4 [details] [associations]
            symbol:HES1 "Transcription factor HES-1" species:9913 "Bos
            taurus" [GO:0021861 "forebrain radial glial cell differentiation"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:2000978 "negative regulation of forebrain neuron
            differentiation" evidence=ISS] [GO:0046427 "positive regulation of
            JAK-STAT cascade" evidence=ISS] [GO:0043388 "positive regulation of
            DNA binding" evidence=ISS] [GO:0007262 "STAT protein import into
            nucleus" evidence=ISS] [GO:0071820 "N-box binding" evidence=ISS]
            [GO:0001078 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=ISS]
            [GO:0042517 "positive regulation of tyrosine phosphorylation of
            Stat3 protein" evidence=ISS] [GO:0006461 "protein complex assembly"
            evidence=ISS] [GO:0042803 "protein homodimerization activity"
            evidence=ISS] [GO:2000974 "negative regulation of pro-B cell
            differentiation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0060253 "negative regulation of glial cell proliferation"
            evidence=ISS] [GO:0048715 "negative regulation of oligodendrocyte
            differentiation" evidence=ISS] [GO:0048711 "positive regulation of
            astrocyte differentiation" evidence=ISS] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0042803
            GO:GO:0006461 GO:GO:0001078 GO:GO:0043565 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0042517 InterPro:IPR018352 SMART:SM00511
            GO:GO:0048711 GO:GO:0048715 GO:GO:0043388 eggNOG:NOG319418
            GO:GO:0007262 GO:GO:0060253 GO:GO:0021861
            GeneTree:ENSGT00700000104168 KO:K06054 EMBL:BC103309
            IPI:IPI00694289 RefSeq:NP_001029850.1 UniGene:Bt.49417
            ProteinModelPortal:Q3ZBG4 STRING:Q3ZBG4 PRIDE:Q3ZBG4
            Ensembl:ENSBTAT00000000742 GeneID:539547 KEGG:bta:539547 CTD:3280
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 InParanoid:Q3ZBG4
            OrthoDB:EOG4TTGK6 NextBio:20878064 GO:GO:0071820 GO:GO:2000978
            GO:GO:2000974 Uniprot:Q3ZBG4
        Length = 280

 Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 29/77 (37%), Positives = 48/77 (62%)

Query:    92 NKLEKADILELTVRHLHRITKPHNP----TEE--VQRFQAGFTQCASEACGFLLSLPGLD 145
             +KLEKADILE+TV+HL  + +        T+   + +++AGF++C +E   FL +  G++
Sbjct:    73 SKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTCEGVN 132

Query:   146 TRVGKRLVEHLGKRISQ 162
             T V  RL+ HL   ++Q
Sbjct:   133 TEVRTRLLGHLANCMTQ 149


>UNIPROTKB|Q14469 [details] [associations]
            symbol:HES1 "Transcription factor HES-1" species:9606 "Homo
            sapiens" [GO:0001889 "liver development" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
            [GO:0007224 "smoothened signaling pathway" evidence=IEA]
            [GO:0016477 "cell migration" evidence=IEA] [GO:0021537
            "telencephalon development" evidence=IEA] [GO:0021555
            "midbrain-hindbrain boundary morphogenesis" evidence=IEA]
            [GO:0021557 "oculomotor nerve development" evidence=IEA]
            [GO:0021558 "trochlear nerve development" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021984
            "adenohypophysis development" evidence=IEA] [GO:0030324 "lung
            development" evidence=IEA] [GO:0030513 "positive regulation of BMP
            signaling pathway" evidence=IEA] [GO:0030901 "midbrain development"
            evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
            evidence=IEA] [GO:0042102 "positive regulation of T cell
            proliferation" evidence=IEA] [GO:0042668 "auditory receptor cell
            fate determination" evidence=IEA] [GO:0045598 "regulation of fat
            cell differentiation" evidence=IEA] [GO:0045608 "negative
            regulation of auditory receptor cell differentiation" evidence=IEA]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IEA] [GO:0046331 "lateral inhibition" evidence=IEA]
            [GO:0048469 "cell maturation" evidence=IEA] [GO:0048667 "cell
            morphogenesis involved in neuron differentiation" evidence=IEA]
            [GO:0060164 "regulation of timing of neuron differentiation"
            evidence=IEA] [GO:0060675 "ureteric bud morphogenesis"
            evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
            development" evidence=IEA] [GO:0061009 "common bile duct
            development" evidence=IEA] [GO:0061106 "negative regulation of
            stomach neuroendocrine cell differentiation" evidence=IEA]
            [GO:0072012 "glomerulus vasculature development" evidence=IEA]
            [GO:0072049 "comma-shaped body morphogenesis" evidence=IEA]
            [GO:0072050 "S-shaped body morphogenesis" evidence=IEA] [GO:0072141
            "renal interstitial cell development" evidence=IEA] [GO:0072282
            "metanephric nephron tubule morphogenesis" evidence=IEA]
            [GO:0090102 "cochlea development" evidence=IEA] [GO:2000227
            "negative regulation of pancreatic A cell differentiation"
            evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IMP;IDA;TAS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0048711 "positive
            regulation of astrocyte differentiation" evidence=ISS] [GO:0048715
            "negative regulation of oligodendrocyte differentiation"
            evidence=ISS] [GO:0060253 "negative regulation of glial cell
            proliferation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:2000974 "negative regulation of pro-B cell differentiation"
            evidence=IMP] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0042803 "protein
            homodimerization activity" evidence=ISS] [GO:0006461 "protein
            complex assembly" evidence=ISS] [GO:0042517 "positive regulation of
            tyrosine phosphorylation of Stat3 protein" evidence=ISS]
            [GO:0001078 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=ISS]
            [GO:0071820 "N-box binding" evidence=ISS] [GO:0007262 "STAT protein
            import into nucleus" evidence=ISS] [GO:0043388 "positive regulation
            of DNA binding" evidence=ISS] [GO:0046427 "positive regulation of
            JAK-STAT cascade" evidence=ISS] [GO:2000978 "negative regulation of
            forebrain neuron differentiation" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0021861
            "forebrain radial glial cell differentiation" evidence=ISS]
            [GO:0097150 "neuronal stem cell maintenance" evidence=IEP]
            [GO:2000737 "negative regulation of stem cell differentiation"
            evidence=IMP] [GO:0008134 "transcription factor binding"
            evidence=NAS] [GO:0003677 "DNA binding" evidence=TAS] [GO:0007399
            "nervous system development" evidence=TAS] [GO:0031018 "endocrine
            pancreas development" evidence=TAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0042826 "histone deacetylase binding"
            evidence=IPI] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0003143 "embryonic heart tube
            morphogenesis" evidence=ISS] [GO:0035910 "ascending aorta
            morphogenesis" evidence=ISS] [GO:0045977 "positive regulation of
            mitotic cell cycle, embryonic" evidence=ISS] [GO:0060412
            "ventricular septum morphogenesis" evidence=ISS] [GO:0003266
            "regulation of secondary heart field cardioblast proliferation"
            evidence=ISS] [GO:0061309 "cardiac neural crest cell development
            involved in outflow tract morphogenesis" evidence=ISS] [GO:0003151
            "outflow tract morphogenesis" evidence=ISS] [GO:0003281
            "ventricular septum development" evidence=ISS] [GO:0008284
            "positive regulation of cell proliferation" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0048538 "thymus
            development" evidence=ISS] [GO:0048844 "artery morphogenesis"
            evidence=ISS] [GO:0060037 "pharyngeal system development"
            evidence=ISS] [GO:0097084 "vascular smooth muscle cell development"
            evidence=ISS] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0005634 GO:GO:0005737 Reactome:REACT_111045
            Reactome:REACT_111102 GO:GO:0042803 GO:GO:0016477 GO:GO:0006461
            GO:GO:0030324 GO:GO:0008284 GO:GO:0001078 GO:GO:0043565
            GO:GO:0001701 GO:GO:0045944 GO:GO:0007155 GO:GO:0007219
            GO:GO:0001889 GO:GO:0045747 GO:GO:0030901 GO:GO:0030513
            GO:GO:0003143 GO:GO:0060037 GO:GO:0042102 GO:GO:0097084
            GO:GO:0046331 GO:GO:0048538 GO:GO:0035019 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0031018 GO:GO:0045598
            GO:GO:0072012 GO:GO:0003151 GO:GO:0007224 GO:GO:0042517
            GO:GO:0021984 GO:GO:0021575 GO:GO:0090102 GO:GO:0042668
            GO:GO:0048469 InterPro:IPR018352 SMART:SM00511 GO:GO:0048711
            GO:GO:0021537 GO:GO:0060675 GO:GO:0048715 GO:GO:0043388
            GO:GO:0060412 GO:GO:0003266 GO:GO:0045608 GO:GO:0097150
            eggNOG:NOG319418 GO:GO:0048667 GO:GO:0007262 CleanEx:HS_HES1
            GO:GO:0060253 GO:GO:0021555 GO:GO:0021861 GO:GO:0061309 KO:K06054
            CTD:3280 HOGENOM:HOG000236346 HOVERGEN:HBG005960 OrthoDB:EOG4TTGK6
            GO:GO:0071820 GO:GO:2000978 GO:GO:2000974 EMBL:L19314 EMBL:AF264785
            EMBL:AK000415 EMBL:CR541843 IPI:IPI00030964 PIR:A53027
            RefSeq:NP_005515.1 UniGene:Hs.250666 ProteinModelPortal:Q14469
            SMR:Q14469 IntAct:Q14469 STRING:Q14469 PhosphoSite:Q14469
            DMDM:3913825 PRIDE:Q14469 DNASU:3280 Ensembl:ENST00000232424
            GeneID:3280 KEGG:hsa:3280 UCSC:uc003ftq.2 GeneCards:GC03P193853
            HGNC:HGNC:5192 MIM:139605 neXtProt:NX_Q14469 PharmGKB:PA29465
            InParanoid:Q14469 OMA:TKVYGGF PhylomeDB:Q14469 GenomeRNAi:3280
            NextBio:13023 ArrayExpress:Q14469 Bgee:Q14469 Genevestigator:Q14469
            GermOnline:ENSG00000114315 GO:GO:0035910 GO:GO:0072049
            GO:GO:0061009 GO:GO:0072282 GO:GO:2000227 GO:GO:2000737
            GO:GO:0061106 GO:GO:0021557 GO:GO:0045977 GO:GO:0060164
            GO:GO:0072141 GO:GO:0072050 GO:GO:0021558 Uniprot:Q14469
        Length = 280

 Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 29/77 (37%), Positives = 48/77 (62%)

Query:    92 NKLEKADILELTVRHLHRITKPHNP----TEE--VQRFQAGFTQCASEACGFLLSLPGLD 145
             +KLEKADILE+TV+HL  + +        T+   + +++AGF++C +E   FL +  G++
Sbjct:    73 SKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTCEGVN 132

Query:   146 TRVGKRLVEHLGKRISQ 162
             T V  RL+ HL   ++Q
Sbjct:   133 TEVRTRLLGHLANCMTQ 149


>UNIPROTKB|I3LM61 [details] [associations]
            symbol:HES1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2000974 "negative regulation of pro-B cell
            differentiation" evidence=IEA] [GO:2000737 "negative regulation of
            stem cell differentiation" evidence=IEA] [GO:2000227 "negative
            regulation of pancreatic A cell differentiation" evidence=IEA]
            [GO:0097150 "neuronal stem cell maintenance" evidence=IEA]
            [GO:0097084 "vascular smooth muscle cell development" evidence=IEA]
            [GO:0090102 "cochlea development" evidence=IEA] [GO:0072282
            "metanephric nephron tubule morphogenesis" evidence=IEA]
            [GO:0072141 "renal interstitial cell development" evidence=IEA]
            [GO:0072050 "S-shaped body morphogenesis" evidence=IEA] [GO:0072049
            "comma-shaped body morphogenesis" evidence=IEA] [GO:0072012
            "glomerulus vasculature development" evidence=IEA] [GO:0071820
            "N-box binding" evidence=IEA] [GO:0061309 "cardiac neural crest
            cell development involved in outflow tract morphogenesis"
            evidence=IEA] [GO:0061106 "negative regulation of stomach
            neuroendocrine cell differentiation" evidence=IEA] [GO:0061009
            "common bile duct development" evidence=IEA] [GO:0060716
            "labyrinthine layer blood vessel development" evidence=IEA]
            [GO:0060675 "ureteric bud morphogenesis" evidence=IEA] [GO:0060412
            "ventricular septum morphogenesis" evidence=IEA] [GO:0060253
            "negative regulation of glial cell proliferation" evidence=IEA]
            [GO:0060164 "regulation of timing of neuron differentiation"
            evidence=IEA] [GO:0060037 "pharyngeal system development"
            evidence=IEA] [GO:0048715 "negative regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0048711 "positive regulation of
            astrocyte differentiation" evidence=IEA] [GO:0048667 "cell
            morphogenesis involved in neuron differentiation" evidence=IEA]
            [GO:0048538 "thymus development" evidence=IEA] [GO:0048469 "cell
            maturation" evidence=IEA] [GO:0046331 "lateral inhibition"
            evidence=IEA] [GO:0045977 "positive regulation of mitotic cell
            cycle, embryonic" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IEA] [GO:0045608 "negative regulation of auditory receptor
            cell differentiation" evidence=IEA] [GO:0045598 "regulation of fat
            cell differentiation" evidence=IEA] [GO:0043388 "positive
            regulation of DNA binding" evidence=IEA] [GO:0042826 "histone
            deacetylase binding" evidence=IEA] [GO:0042803 "protein
            homodimerization activity" evidence=IEA] [GO:0042668 "auditory
            receptor cell fate determination" evidence=IEA] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IEA] [GO:0042102 "positive regulation of T cell
            proliferation" evidence=IEA] [GO:0035910 "ascending aorta
            morphogenesis" evidence=IEA] [GO:0035019 "somatic stem cell
            maintenance" evidence=IEA] [GO:0031016 "pancreas development"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0030513 "positive regulation of BMP signaling pathway"
            evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
            [GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021558 "trochlear
            nerve development" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0021537 "telencephalon
            development" evidence=IEA] [GO:0016477 "cell migration"
            evidence=IEA] [GO:0007262 "STAT protein import into nucleus"
            evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
            [GO:0007155 "cell adhesion" evidence=IEA] [GO:0006461 "protein
            complex assembly" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003266
            "regulation of secondary heart field cardioblast proliferation"
            evidence=IEA] [GO:0003143 "embryonic heart tube morphogenesis"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0001078 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0005737 GO:GO:0016477 GO:GO:0006461 GO:GO:0030324
            GO:GO:0001078 GO:GO:0001701 GO:GO:0045944 GO:GO:0007155
            GO:GO:0007219 GO:GO:0001889 GO:GO:0045747 GO:GO:0030901
            GO:GO:0030513 GO:GO:0060037 GO:GO:0042102 GO:GO:0097084
            GO:GO:0046331 GO:GO:0048538 GO:GO:0035019 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0031016 GO:GO:0045598 GO:GO:0048844
            GO:GO:0072012 GO:GO:0003151 GO:GO:0007224 GO:GO:0042517
            GO:GO:0021984 GO:GO:0021575 GO:GO:0090102 GO:GO:0042668
            GO:GO:0048469 InterPro:IPR018352 SMART:SM00511 GO:GO:0048711
            GO:GO:0021537 GO:GO:0060675 GO:GO:0048715 GO:GO:0043388
            GO:GO:0003281 GO:GO:0003266 GO:GO:0045608 GO:GO:0097150
            GO:GO:0048667 GO:GO:0007262 GO:GO:0060253 GO:GO:0021555
            GeneTree:ENSGT00700000104168 GO:GO:0061309 GO:GO:0071820
            GO:GO:2000974 OMA:TKVYGGF GO:GO:0072049 GO:GO:0061009 GO:GO:0072282
            GO:GO:2000227 GO:GO:2000737 GO:GO:0061106 GO:GO:0021557
            GO:GO:0060164 GO:GO:0072141 GO:GO:0072050 GO:GO:0021558
            EMBL:FP565159 ProteinModelPortal:I3LM61 PRIDE:I3LM61
            Ensembl:ENSSSCT00000026743 Uniprot:I3LM61
        Length = 280

 Score = 127 (49.8 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 29/77 (37%), Positives = 48/77 (62%)

Query:    92 NKLEKADILELTVRHLHRITKPHNP----TEE--VQRFQAGFTQCASEACGFLLSLPGLD 145
             +KLEKADILE+TV+HL  + +        T+   + +++AGF++C +E   FL +  G++
Sbjct:    73 SKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTCEGVN 132

Query:   146 TRVGKRLVEHLGKRISQ 162
             T V  RL+ HL   ++Q
Sbjct:   133 TEVRTRLLGHLANCMTQ 149


>UNIPROTKB|E2R7Q8 [details] [associations]
            symbol:HES4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104168
            CTD:57801 KO:K09089 EMBL:AAEX03003836 EMBL:AAEX03003832
            EMBL:AAEX03003833 EMBL:AAEX03003834 EMBL:AAEX03003835
            RefSeq:XP_546724.1 Ensembl:ENSCAFT00000030751 GeneID:489604
            KEGG:cfa:489604 Uniprot:E2R7Q8
        Length = 225

 Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 31/85 (36%), Positives = 46/85 (54%)

Query:    84 FQAEGENINKLEKADILELTVRHLH-----RITKPHNPTEEVQ-RFQAGFTQCASEACGF 137
             F+ +    +KLEKADILE+TVRHL      ++T   +    V  +++AGF +C +E   F
Sbjct:    65 FRKDSSRHSKLEKADILEMTVRHLQSLRRVQVTAALSADPAVLGKYRAGFNECLAEVNRF 124

Query:   138 LLSLPGLDTRVGKRLVEHLGKRISQ 162
             L    G+   V  RL+ HL   + Q
Sbjct:   125 LAGCEGVPAEVRSRLLGHLAACLGQ 149


>UNIPROTKB|G3N2D5 [details] [associations]
            symbol:HES1 "Transcription factor HES-1" species:9913 "Bos
            taurus" [GO:2000974 "negative regulation of pro-B cell
            differentiation" evidence=IEA] [GO:2000737 "negative regulation of
            stem cell differentiation" evidence=IEA] [GO:2000227 "negative
            regulation of pancreatic A cell differentiation" evidence=IEA]
            [GO:0097150 "neuronal stem cell maintenance" evidence=IEA]
            [GO:0097084 "vascular smooth muscle cell development" evidence=IEA]
            [GO:0090102 "cochlea development" evidence=IEA] [GO:0072282
            "metanephric nephron tubule morphogenesis" evidence=IEA]
            [GO:0072141 "renal interstitial cell development" evidence=IEA]
            [GO:0072050 "S-shaped body morphogenesis" evidence=IEA] [GO:0072049
            "comma-shaped body morphogenesis" evidence=IEA] [GO:0072012
            "glomerulus vasculature development" evidence=IEA] [GO:0071820
            "N-box binding" evidence=IEA] [GO:0061309 "cardiac neural crest
            cell development involved in outflow tract morphogenesis"
            evidence=IEA] [GO:0061106 "negative regulation of stomach
            neuroendocrine cell differentiation" evidence=IEA] [GO:0061009
            "common bile duct development" evidence=IEA] [GO:0060716
            "labyrinthine layer blood vessel development" evidence=IEA]
            [GO:0060675 "ureteric bud morphogenesis" evidence=IEA] [GO:0060412
            "ventricular septum morphogenesis" evidence=IEA] [GO:0060253
            "negative regulation of glial cell proliferation" evidence=IEA]
            [GO:0060164 "regulation of timing of neuron differentiation"
            evidence=IEA] [GO:0060037 "pharyngeal system development"
            evidence=IEA] [GO:0048715 "negative regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0048711 "positive regulation of
            astrocyte differentiation" evidence=IEA] [GO:0048667 "cell
            morphogenesis involved in neuron differentiation" evidence=IEA]
            [GO:0048538 "thymus development" evidence=IEA] [GO:0048469 "cell
            maturation" evidence=IEA] [GO:0046331 "lateral inhibition"
            evidence=IEA] [GO:0045977 "positive regulation of mitotic cell
            cycle, embryonic" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IEA] [GO:0045608 "negative regulation of auditory receptor
            cell differentiation" evidence=IEA] [GO:0045598 "regulation of fat
            cell differentiation" evidence=IEA] [GO:0043388 "positive
            regulation of DNA binding" evidence=IEA] [GO:0042826 "histone
            deacetylase binding" evidence=IEA] [GO:0042803 "protein
            homodimerization activity" evidence=IEA] [GO:0042668 "auditory
            receptor cell fate determination" evidence=IEA] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IEA] [GO:0042102 "positive regulation of T cell
            proliferation" evidence=IEA] [GO:0035910 "ascending aorta
            morphogenesis" evidence=IEA] [GO:0035019 "somatic stem cell
            maintenance" evidence=IEA] [GO:0031016 "pancreas development"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0030513 "positive regulation of BMP signaling pathway"
            evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
            [GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021558 "trochlear
            nerve development" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0021537 "telencephalon
            development" evidence=IEA] [GO:0016477 "cell migration"
            evidence=IEA] [GO:0007262 "STAT protein import into nucleus"
            evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
            [GO:0007155 "cell adhesion" evidence=IEA] [GO:0006461 "protein
            complex assembly" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003266
            "regulation of secondary heart field cardioblast proliferation"
            evidence=IEA] [GO:0003143 "embryonic heart tube morphogenesis"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0001078 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0005737 GO:GO:0016477 GO:GO:0006461 GO:GO:0030324
            GO:GO:0001078 GO:GO:0001701 GO:GO:0045944 GO:GO:0007155
            GO:GO:0007219 GO:GO:0001889 GO:GO:0045747 GO:GO:0030901
            GO:GO:0030513 GO:GO:0060037 GO:GO:0042102 GO:GO:0097084
            GO:GO:0046331 GO:GO:0048538 GO:GO:0035019 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0031016 GO:GO:0045598 GO:GO:0048844
            GO:GO:0072012 GO:GO:0003151 GO:GO:0007224 GO:GO:0042517
            GO:GO:0021984 GO:GO:0021575 GO:GO:0090102 GO:GO:0042668
            GO:GO:0048469 InterPro:IPR018352 SMART:SM00511 GO:GO:0048711
            GO:GO:0021537 GO:GO:0060675 GO:GO:0048715 GO:GO:0043388
            GO:GO:0003281 GO:GO:0003266 GO:GO:0045608 GO:GO:0097150
            GO:GO:0048667 GO:GO:0007262 GO:GO:0060253 GO:GO:0021555
            GeneTree:ENSGT00700000104168 GO:GO:0061309 GO:GO:0071820
            GO:GO:2000974 OMA:TKVYGGF GO:GO:0072049 GO:GO:0061009 GO:GO:0072282
            GO:GO:2000227 GO:GO:2000737 GO:GO:0061106 GO:GO:0021557
            GO:GO:0060164 GO:GO:0072141 GO:GO:0072050 GO:GO:0021558
            EMBL:DAAA02001738 Ensembl:ENSBTAT00000062965 Uniprot:G3N2D5
        Length = 304

 Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 29/77 (37%), Positives = 48/77 (62%)

Query:    92 NKLEKADILELTVRHLHRITKPHNP----TEE--VQRFQAGFTQCASEACGFLLSLPGLD 145
             +KLEKADILE+TV+HL  + +        T+   + +++AGF++C +E   FL +  G++
Sbjct:    73 SKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTCEGVN 132

Query:   146 TRVGKRLVEHLGKRISQ 162
             T V  RL+ HL   ++Q
Sbjct:   133 TEVRTRLLGHLANCMTQ 149


>UNIPROTKB|A1L3K9 [details] [associations]
            symbol:LOC100037036 "LOC100037036 protein" species:8355
            "Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
            [GO:0043425 "bHLH transcription factor binding" evidence=IPI]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 HOVERGEN:HBG107098 EMBL:BC130161 UniGene:Xl.74933
            Uniprot:A1L3K9
        Length = 222

 Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 28/93 (30%), Positives = 49/93 (52%)

Query:    70 RITKPHDPTEEVQRFQAEGENINKLEKADILELTVRHLHRITKPHNPT------EEVQRF 123
             R  + ++  +E++   ++ E   K+E A++L+LTV+ + RI +           E  +RF
Sbjct:    52 RRARINESLQELRGILSDNEFQTKIENAEVLDLTVKRVERILRNRTAEADRLQREASERF 111

Query:   124 QAGFTQCASEACGFLLSLPGLDTRVGKRLVEHL 156
              AG+ QC  E   F+ S PG+D  +   L+ HL
Sbjct:   112 AAGYIQCMHEVHTFVSSCPGIDASLAAELLNHL 144


>UNIPROTKB|Q5PPM5 [details] [associations]
            symbol:hes1 "Transcription factor HES-1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0007219 "Notch signaling
            pathway" evidence=ISS] [GO:0043425 "bHLH transcription factor
            binding" evidence=ISS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0046982 "protein
            heterodimerization activity" evidence=ISS] [GO:0048635 "negative
            regulation of muscle organ development" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003677 GO:GO:0007219 GO:GO:0006351
            GO:GO:0000122 GO:GO:0046982 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GO:GO:0043425 eggNOG:NOG319418
            GeneTree:ENSGT00700000104168 KO:K06054 GO:GO:0048635 CTD:3280
            HOGENOM:HOG000236346 OrthoDB:EOG4TTGK6 EMBL:AC160833 EMBL:CR760467
            EMBL:BC087608 RefSeq:NP_001011194.1 UniGene:Str.10866
            ProteinModelPortal:Q5PPM5 STRING:Q5PPM5 Ensembl:ENSXETT00000036731
            GeneID:496617 KEGG:xtr:496617 Xenbase:XB-GENE-487995
            InParanoid:Q5PPM5 Bgee:Q5PPM5 Uniprot:Q5PPM5
        Length = 267

 Score = 124 (48.7 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 29/77 (37%), Positives = 48/77 (62%)

Query:    92 NKLEKADILELTVRHLHRITKPHNP----TEE--VQRFQAGFTQCASEACGFLLSLPGLD 145
             +KLEKADILE+TV+HL  + +        T+   + +++AGF++C +E   FL +  G++
Sbjct:    73 SKLEKADILEMTVKHLRNLQRVQMTAALSTDPSVLGKYRAGFSECMNEVTRFLSTCEGVN 132

Query:   146 TRVGKRLVEHLGKRISQ 162
             T V  RL+ HL   ++Q
Sbjct:   133 TDVRTRLLGHLANCMNQ 149


>UNIPROTKB|Q6IRB2 [details] [associations]
            symbol:hes1-a "Transcription factor HES-1-A" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0005634
            "nucleus" evidence=ISS] [GO:0007219 "Notch signaling pathway"
            evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
            evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0046982 "protein
            heterodimerization activity" evidence=IPI] [GO:0048635 "negative
            regulation of muscle organ development" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0007219 GO:GO:0006351
            GO:GO:0000122 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 EMBL:U36194 EMBL:BC070988 RefSeq:NP_001081396.1
            UniGene:Xl.21817 ProteinModelPortal:Q6IRB2 GeneID:397813
            KEGG:xla:397813 CTD:397813 Xenbase:XB-GENE-865756 KO:K06054
            GO:GO:0048635 Uniprot:Q6IRB2
        Length = 267

 Score = 124 (48.7 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 29/77 (37%), Positives = 48/77 (62%)

Query:    92 NKLEKADILELTVRHLHRITKPHNP----TEE--VQRFQAGFTQCASEACGFLLSLPGLD 145
             +KLEKADILE+TV+HL  + +        T+   + +++AGF++C +E   FL +  G++
Sbjct:    73 SKLEKADILEMTVKHLRNLQRVQMSAALSTDPSVLGKYRAGFSECMNEVTRFLSTCEGVN 132

Query:   146 TRVGKRLVEHLGKRISQ 162
             T V  RL+ HL   ++Q
Sbjct:   133 TDVRTRLLGHLANCMNQ 149


>UNIPROTKB|F1NWS0 [details] [associations]
            symbol:F1NWS0 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR003650 Pfam:PF07527 PROSITE:PS51054 GO:GO:0006355
            GO:GO:0003677 InterPro:IPR018352 SMART:SM00511
            GeneTree:ENSGT00700000104168 EMBL:AADN02040837 EMBL:AADN02040838
            IPI:IPI01017247 Ensembl:ENSGALT00000040166 ArrayExpress:F1NWS0
            Uniprot:F1NWS0
        Length = 219

 Score = 121 (47.7 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 29/83 (34%), Positives = 48/83 (57%)

Query:    92 NKLEKADILELTVRHLHRITKPH-------NPTEEVQRFQAGFTQCASEACGFLLSLPGL 144
             +KLEKADILE+TV+HL  + +         +P+  + +++AGF +C +E   FL +  G+
Sbjct:     5 SKLEKADILEMTVKHLRNLQRAQMAAALSADPSV-LGKYRAGFNECMNEVTRFLSTCEGV 63

Query:   145 DTRVGKRLVEHLGKRISQSLEAN 167
             +  V  RL+ HL   + Q +  N
Sbjct:    64 NADVRARLLGHLSACLGQIVAMN 86


>UNIPROTKB|F1P2S5 [details] [associations]
            symbol:F1P2S5 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0001078 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in negative regulation of transcription"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0003143 "embryonic heart tube morphogenesis" evidence=IEA]
            [GO:0003266 "regulation of secondary heart field cardioblast
            proliferation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006461 "protein complex
            assembly" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0007224
            "smoothened signaling pathway" evidence=IEA] [GO:0007262 "STAT
            protein import into nucleus" evidence=IEA] [GO:0016477 "cell
            migration" evidence=IEA] [GO:0021537 "telencephalon development"
            evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021558 "trochlear nerve
            development" evidence=IEA] [GO:0021575 "hindbrain morphogenesis"
            evidence=IEA] [GO:0021984 "adenohypophysis development"
            evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
            [GO:0030513 "positive regulation of BMP signaling pathway"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0031016 "pancreas development" evidence=IEA] [GO:0035019
            "somatic stem cell maintenance" evidence=IEA] [GO:0035910
            "ascending aorta morphogenesis" evidence=IEA] [GO:0042102 "positive
            regulation of T cell proliferation" evidence=IEA] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IEA] [GO:0042668 "auditory receptor cell fate
            determination" evidence=IEA] [GO:0042803 "protein homodimerization
            activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
            evidence=IEA] [GO:0045598 "regulation of fat cell differentiation"
            evidence=IEA] [GO:0045608 "negative regulation of auditory receptor
            cell differentiation" evidence=IEA] [GO:0045747 "positive
            regulation of Notch signaling pathway" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0045977 "positive regulation of mitotic
            cell cycle, embryonic" evidence=IEA] [GO:0046331 "lateral
            inhibition" evidence=IEA] [GO:0048469 "cell maturation"
            evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
            [GO:0048667 "cell morphogenesis involved in neuron differentiation"
            evidence=IEA] [GO:0048711 "positive regulation of astrocyte
            differentiation" evidence=IEA] [GO:0048715 "negative regulation of
            oligodendrocyte differentiation" evidence=IEA] [GO:0060037
            "pharyngeal system development" evidence=IEA] [GO:0060164
            "regulation of timing of neuron differentiation" evidence=IEA]
            [GO:0060253 "negative regulation of glial cell proliferation"
            evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
            evidence=IEA] [GO:0060675 "ureteric bud morphogenesis"
            evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
            development" evidence=IEA] [GO:0061009 "common bile duct
            development" evidence=IEA] [GO:0061106 "negative regulation of
            stomach neuroendocrine cell differentiation" evidence=IEA]
            [GO:0061309 "cardiac neural crest cell development involved in
            outflow tract morphogenesis" evidence=IEA] [GO:0071820 "N-box
            binding" evidence=IEA] [GO:0072012 "glomerulus vasculature
            development" evidence=IEA] [GO:0072049 "comma-shaped body
            morphogenesis" evidence=IEA] [GO:0072050 "S-shaped body
            morphogenesis" evidence=IEA] [GO:0072141 "renal interstitial cell
            development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
            morphogenesis" evidence=IEA] [GO:0090102 "cochlea development"
            evidence=IEA] [GO:0097084 "vascular smooth muscle cell development"
            evidence=IEA] [GO:0097150 "neuronal stem cell maintenance"
            evidence=IEA] [GO:2000227 "negative regulation of pancreatic A cell
            differentiation" evidence=IEA] [GO:2000737 "negative regulation of
            stem cell differentiation" evidence=IEA] [GO:2000974 "negative
            regulation of pro-B cell differentiation" evidence=IEA]
            InterPro:IPR003650 Pfam:PF07527 PROSITE:PS51054 GO:GO:0005634
            GO:GO:0005737 GO:GO:0016477 GO:GO:0006461 GO:GO:0001078
            GO:GO:0045944 GO:GO:0007155 GO:GO:0045747 GO:GO:0030513
            GO:GO:0042102 GO:GO:0046331 GO:GO:0045598 GO:GO:0007224
            GO:GO:0042517 InterPro:IPR018352 SMART:SM00511 GO:GO:0043388
            GO:GO:0003266 GO:GO:0007262 GO:GO:0048505
            GeneTree:ENSGT00700000104168 GO:GO:0071820 GO:GO:2000227
            GO:GO:0061106 EMBL:AADN02040837 EMBL:AADN02040838 IPI:IPI00602379
            Ensembl:ENSGALT00000003195 ArrayExpress:F1P2S5 Uniprot:F1P2S5
        Length = 221

 Score = 121 (47.7 bits), Expect = 3.1e-05, P = 3.1e-05
 Identities = 29/83 (34%), Positives = 48/83 (57%)

Query:    92 NKLEKADILELTVRHLHRITKPH-------NPTEEVQRFQAGFTQCASEACGFLLSLPGL 144
             +KLEKADILE+TV+HL  + +         +P+  + +++AGF +C +E   FL +  G+
Sbjct:     5 SKLEKADILEMTVKHLRNLQRAQMAAALSADPSV-LGKYRAGFNECMNEVTRFLSTCEGV 63

Query:   145 DTRVGKRLVEHLGKRISQSLEAN 167
             +  V  RL+ HL   + Q +  N
Sbjct:    64 NADVRARLLGHLSACLGQIVAMN 86


>UNIPROTKB|F1NWR8 [details] [associations]
            symbol:F1NWR8 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0001078 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in negative regulation of transcription"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0003143 "embryonic heart tube morphogenesis" evidence=IEA]
            [GO:0003266 "regulation of secondary heart field cardioblast
            proliferation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006461 "protein complex
            assembly" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0007224
            "smoothened signaling pathway" evidence=IEA] [GO:0007262 "STAT
            protein import into nucleus" evidence=IEA] [GO:0016477 "cell
            migration" evidence=IEA] [GO:0021537 "telencephalon development"
            evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021558 "trochlear nerve
            development" evidence=IEA] [GO:0021575 "hindbrain morphogenesis"
            evidence=IEA] [GO:0021984 "adenohypophysis development"
            evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
            [GO:0030513 "positive regulation of BMP signaling pathway"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0031016 "pancreas development" evidence=IEA] [GO:0035019
            "somatic stem cell maintenance" evidence=IEA] [GO:0035910
            "ascending aorta morphogenesis" evidence=IEA] [GO:0042102 "positive
            regulation of T cell proliferation" evidence=IEA] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IEA] [GO:0042668 "auditory receptor cell fate
            determination" evidence=IEA] [GO:0042803 "protein homodimerization
            activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
            evidence=IEA] [GO:0045598 "regulation of fat cell differentiation"
            evidence=IEA] [GO:0045608 "negative regulation of auditory receptor
            cell differentiation" evidence=IEA] [GO:0045747 "positive
            regulation of Notch signaling pathway" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0045977 "positive regulation of mitotic
            cell cycle, embryonic" evidence=IEA] [GO:0046331 "lateral
            inhibition" evidence=IEA] [GO:0048469 "cell maturation"
            evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
            [GO:0048667 "cell morphogenesis involved in neuron differentiation"
            evidence=IEA] [GO:0048711 "positive regulation of astrocyte
            differentiation" evidence=IEA] [GO:0048715 "negative regulation of
            oligodendrocyte differentiation" evidence=IEA] [GO:0060037
            "pharyngeal system development" evidence=IEA] [GO:0060164
            "regulation of timing of neuron differentiation" evidence=IEA]
            [GO:0060253 "negative regulation of glial cell proliferation"
            evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
            evidence=IEA] [GO:0060675 "ureteric bud morphogenesis"
            evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
            development" evidence=IEA] [GO:0061009 "common bile duct
            development" evidence=IEA] [GO:0061106 "negative regulation of
            stomach neuroendocrine cell differentiation" evidence=IEA]
            [GO:0061309 "cardiac neural crest cell development involved in
            outflow tract morphogenesis" evidence=IEA] [GO:0071820 "N-box
            binding" evidence=IEA] [GO:0072012 "glomerulus vasculature
            development" evidence=IEA] [GO:0072049 "comma-shaped body
            morphogenesis" evidence=IEA] [GO:0072050 "S-shaped body
            morphogenesis" evidence=IEA] [GO:0072141 "renal interstitial cell
            development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
            morphogenesis" evidence=IEA] [GO:0090102 "cochlea development"
            evidence=IEA] [GO:0097084 "vascular smooth muscle cell development"
            evidence=IEA] [GO:0097150 "neuronal stem cell maintenance"
            evidence=IEA] [GO:2000227 "negative regulation of pancreatic A cell
            differentiation" evidence=IEA] [GO:2000737 "negative regulation of
            stem cell differentiation" evidence=IEA] [GO:2000974 "negative
            regulation of pro-B cell differentiation" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF07527 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0005737 GO:GO:0016477
            GO:GO:0006461 GO:GO:0001078 GO:GO:0045944 GO:GO:0007155
            GO:GO:0045747 GO:GO:0030513 GO:GO:0042102 GO:GO:0046331
            Gene3D:4.10.280.10 GO:GO:0045598 GO:GO:0007224 GO:GO:0042517
            InterPro:IPR018352 SMART:SM00511 GO:GO:0043388 GO:GO:0003266
            GO:GO:0007262 GO:GO:0048505 GeneTree:ENSGT00700000104168
            GO:GO:0071820 GO:GO:2000227 GO:GO:0061106 EMBL:AADN02040837
            EMBL:AADN02040838 IPI:IPI00823163 Ensembl:ENSGALT00000040170
            OMA:HTPDKPK ArrayExpress:F1NWR8 Uniprot:F1NWR8
        Length = 264

 Score = 123 (48.4 bits), Expect = 3.3e-05, P = 3.3e-05
 Identities = 31/96 (32%), Positives = 53/96 (55%)

Query:    79 EEVQRFQAEGENINKLEKADILELTVRHLHRITKPH-------NPTEEVQRFQAGFTQCA 131
             EE +  + +    +KLEKADILE+TV+HL  + +         +P+  + +++AGF +C 
Sbjct:    35 EEEKSKKNKSSRHSKLEKADILEMTVKHLRNLQRAQMAAALSADPSV-LGKYRAGFNECM 93

Query:   132 SEACGFLLSLPGLDTRVGKRLVEHLGKRISQSLEAN 167
             +E   FL +  G++  V  RL+ HL   + Q +  N
Sbjct:    94 NEVTRFLSTCEGVNADVRARLLGHLSACLGQIVAMN 129


>UNIPROTKB|D6REB3 [details] [associations]
            symbol:HES4 "Transcription factor HES-4" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR003650 Pfam:PF07527 PROSITE:PS51054 GO:GO:0006355
            GO:GO:0003677 EMBL:AL645608 InterPro:IPR018352 SMART:SM00511
            HOGENOM:HOG000236346 HGNC:HGNC:24149 IPI:IPI00966381
            ProteinModelPortal:D6REB3 SMR:D6REB3 Ensembl:ENST00000484667
            ArrayExpress:D6REB3 Bgee:D6REB3 Uniprot:D6REB3
        Length = 189

 Score = 118 (46.6 bits), Expect = 3.5e-05, P = 3.5e-05
 Identities = 35/97 (36%), Positives = 50/97 (51%)

Query:    92 NKLEKADILELTVRHLH-----RITKPHNPTEEVQ-RFQAGFTQCASEACGFLLSLPGLD 145
             +KLEKADILE+TVRHL      ++T   +    V  +++AGF +C +E   FL    G+ 
Sbjct:    41 SKLEKADILEMTVRHLRSLRRVQVTAALSADPAVLGKYRAGFHECLAEVNRFLAGCEGVP 100

Query:   146 TRVGKRLVEHLGKRISQ-SLEANPALLLSNGESFSPA 181
               V  RL+ HL   + Q      PA L     + +PA
Sbjct:   101 ADVRSRLLGHLAACLRQLGPSRRPASLSPAAPAEAPA 137


>UNIPROTKB|I3LBX1 [details] [associations]
            symbol:HES4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 KO:K09089 OMA:GPWRPWL
            EMBL:FP565685 RefSeq:XP_003481977.1 Ensembl:ENSSSCT00000024059
            GeneID:100739264 KEGG:ssc:100739264 Uniprot:I3LBX1
        Length = 228

 Score = 121 (47.7 bits), Expect = 3.5e-05, P = 3.5e-05
 Identities = 31/82 (37%), Positives = 45/82 (54%)

Query:    87 EGENINKLEKADILELTVRHLH-----RITKPHNPTEEVQ-RFQAGFTQCASEACGFLLS 140
             E    +KLEKADILE+TVRHL      ++T   +    V  +++AGF +C +E   FL+ 
Sbjct:    68 ESSRHSKLEKADILEMTVRHLQSLRRVQVTAALSADPAVLGKYRAGFNECLAEVNRFLVG 127

Query:   141 LPGLDTRVGKRLVEHLGKRISQ 162
               G+   V  RL+ HL   + Q
Sbjct:   128 CEGVPADVRSRLLGHLAACLGQ 149


>UNIPROTKB|Q9HCC6 [details] [associations]
            symbol:HES4 "Transcription factor HES-4" species:9606 "Homo
            sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
            system development" evidence=IEA] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=NAS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0007399 GO:GO:0030154 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 EMBL:AL645608 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 InterPro:IPR018352 SMART:SM00511 eggNOG:NOG319418
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 EMBL:AB048791 EMBL:BC012351
            IPI:IPI00028151 RefSeq:NP_001135939.1 RefSeq:NP_066993.1
            UniGene:Hs.154029 ProteinModelPortal:Q9HCC6 SMR:Q9HCC6
            IntAct:Q9HCC6 STRING:Q9HCC6 PhosphoSite:Q9HCC6 DMDM:34098717
            UCD-2DPAGE:Q9HCC6 PRIDE:Q9HCC6 DNASU:57801 Ensembl:ENST00000304952
            GeneID:57801 KEGG:hsa:57801 UCSC:uc001aci.2 CTD:57801
            GeneCards:GC01M000924 HGNC:HGNC:24149 MIM:608060 neXtProt:NX_Q9HCC6
            PharmGKB:PA134975318 InParanoid:Q9HCC6 KO:K09089 PhylomeDB:Q9HCC6
            GenomeRNAi:57801 NextBio:64747 ArrayExpress:Q9HCC6 Bgee:Q9HCC6
            CleanEx:HS_HES4 Genevestigator:Q9HCC6 GermOnline:ENSG00000188290
            Uniprot:Q9HCC6
        Length = 221

 Score = 120 (47.3 bits), Expect = 4.2e-05, P = 4.2e-05
 Identities = 36/102 (35%), Positives = 51/102 (50%)

Query:    87 EGENINKLEKADILELTVRHLH-----RITKPHNPTEEVQ-RFQAGFTQCASEACGFLLS 140
             E    +KLEKADILE+TVRHL      ++T   +    V  +++AGF +C +E   FL  
Sbjct:    68 ESSRHSKLEKADILEMTVRHLRSLRRVQVTAALSADPAVLGKYRAGFHECLAEVNRFLAG 127

Query:   141 LPGLDTRVGKRLVEHLGKRISQ-SLEANPALLLSNGESFSPA 181
               G+   V  RL+ HL   + Q      PA L     + +PA
Sbjct:   128 CEGVPADVRSRLLGHLAACLRQLGPSRRPASLSPAAPAEAPA 169


>UNIPROTKB|E9PB28 [details] [associations]
            symbol:HES4 "Transcription factor HES-4" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 EMBL:AL645608 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 RefSeq:NP_001135939.1
            UniGene:Hs.154029 DNASU:57801 GeneID:57801 KEGG:hsa:57801 CTD:57801
            HGNC:HGNC:24149 KO:K09089 GenomeRNAi:57801 NextBio:64747
            IPI:IPI00917954 ProteinModelPortal:E9PB28 SMR:E9PB28
            Ensembl:ENST00000428771 UCSC:uc010nyc.1 OMA:GPWRPWL
            ArrayExpress:E9PB28 Bgee:E9PB28 Uniprot:E9PB28
        Length = 247

 Score = 120 (47.3 bits), Expect = 6.0e-05, P = 6.0e-05
 Identities = 36/102 (35%), Positives = 51/102 (50%)

Query:    87 EGENINKLEKADILELTVRHLH-----RITKPHNPTEEVQ-RFQAGFTQCASEACGFLLS 140
             E    +KLEKADILE+TVRHL      ++T   +    V  +++AGF +C +E   FL  
Sbjct:    94 ESSRHSKLEKADILEMTVRHLRSLRRVQVTAALSADPAVLGKYRAGFHECLAEVNRFLAG 153

Query:   141 LPGLDTRVGKRLVEHLGKRISQ-SLEANPALLLSNGESFSPA 181
               G+   V  RL+ HL   + Q      PA L     + +PA
Sbjct:   154 CEGVPADVRSRLLGHLAACLRQLGPSRRPASLSPAAPAEAPA 195


>UNIPROTKB|O57337 [details] [associations]
            symbol:HES1 "Transcription factor HES-1" species:9031
            "Gallus gallus" [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 eggNOG:NOG319418 KO:K06054
            CTD:3280 HOGENOM:HOG000236346 HOVERGEN:HBG005960 EMBL:AF032966
            IPI:IPI00604360 RefSeq:NP_001005848.1 RefSeq:NP_989803.1
            UniGene:Gga.3754 ProteinModelPortal:O57337 STRING:O57337
            GeneID:395128 KEGG:gga:395128 NextBio:20815220 Uniprot:O57337
        Length = 290

 Score = 121 (47.7 bits), Expect = 7.0e-05, P = 7.0e-05
 Identities = 29/83 (34%), Positives = 48/83 (57%)

Query:    92 NKLEKADILELTVRHLHRITKPH-------NPTEEVQRFQAGFTQCASEACGFLLSLPGL 144
             +KLEKADILE+TV+HL  + +         +P+  + +++AGF +C +E   FL +  G+
Sbjct:    74 SKLEKADILEMTVKHLRNLQRAQMAAALSADPSV-LGKYRAGFNECMNEVTRFLSTCEGV 132

Query:   145 DTRVGKRLVEHLGKRISQSLEAN 167
             +  V  RL+ HL   + Q +  N
Sbjct:   133 NADVRARLLGHLSACLGQIVAMN 155


>UNIPROTKB|F1SIU5 [details] [associations]
            symbol:HES6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0007399 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
            GO:GO:0006357 GO:GO:0006351 GO:GO:0005667 GO:GO:0003712
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104130
            KO:K09087 OMA:EGSSFQD EMBL:CU929385 RefSeq:XP_003359740.1
            Ensembl:ENSSSCT00000017797 GeneID:100622397 KEGG:ssc:100622397
            Uniprot:F1SIU5
        Length = 224

 Score = 118 (46.6 bits), Expect = 7.6e-05, P = 7.6e-05
 Identities = 46/171 (26%), Positives = 76/171 (44%)

Query:    70 RITKPHDPTEEVQRFQAEGENINKLEKADILELTVRHLHRITKPH-NPTEEVQ-----RF 123
             R  + ++  +E++   A  E   KLE A++LELTVR +    +      E++Q     RF
Sbjct:    37 RRARINESLQELRLLLAGAEVQAKLENAEVLELTVRRVQGALRGRAREREQLQAEASERF 96

Query:   124 QAGFTQCASEACGFLLSLPGLDTRVGKRLVEHLGKRISQSLEANPALLLSNGESFS-PAG 182
              AG+ QC  E   F+ +   +D  V   L+ HL +  S  L  + +     G++ S P G
Sbjct:    97 AAGYIQCMHEVHTFVSTCQAIDATVAAELLNHLLE--SMPLRESSSFRDLLGDALSGPPG 154

Query:   183 GYERDDYATL-PRDARVPSSLGSATQDSLRSGVADNASSQSSAMMLPQSNP 232
              + R ++    P  + +PS  GS    S     A  A    + +  P+  P
Sbjct:   155 VHGRSNWPVGGPLGSPLPSPRGSGDDQSSDLEEAPEAELSRATVEGPELVP 205


>ZFIN|ZDB-GENE-050228-1 [details] [associations]
            symbol:her13 "hairy-related 13" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 ZFIN:ZDB-GENE-050228-1 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            eggNOG:NOG241578 HOGENOM:HOG000236346 HOVERGEN:HBG107098
            OrthoDB:EOG4G7C0H EMBL:BC092944 IPI:IPI00611159
            RefSeq:NP_001017901.1 UniGene:Dr.151885 GeneID:550600
            KEGG:dre:550600 CTD:550600 InParanoid:Q568A5 NextBio:20879837
            Uniprot:Q568A5
        Length = 224

 Score = 118 (46.6 bits), Expect = 7.6e-05, P = 7.6e-05
 Identities = 27/93 (29%), Positives = 50/93 (53%)

Query:    70 RITKPHDPTEEVQRFQAEGENINKLEKADILELTVRHLHRITKPHNP-----TEEV-QRF 123
             R  + ++  ++++      +   K+E A++LELTV+ +  I +  +      T+E  +RF
Sbjct:    36 RRARINESLQDLRTLLTNNDLQTKMENAEVLELTVKRVESILQSRSQETGTVTQEASERF 95

Query:   124 QAGFTQCASEACGFLLSLPGLDTRVGKRLVEHL 156
              AG+ QC  E   F+ + PG++ RV   L+ HL
Sbjct:    96 AAGYIQCMHEVHTFVSTCPGIEARVAAELLNHL 128


>FB|FBgn0032741 [details] [associations]
            symbol:Side "similar to Deadpan" species:7227 "Drosophila
            melanogaster" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=IC] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0005634 EMBL:AE014134 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104130 EMBL:AY060791 RefSeq:NP_523599.1
            UniGene:Dm.2592 SMR:Q9VJ16 IntAct:Q9VJ16 STRING:Q9VJ16
            EnsemblMetazoa:FBtr0081141 GeneID:35168 KEGG:dme:Dmel_CG10446
            UCSC:CG10446-RA CTD:35168 FlyBase:FBgn0032741 eggNOG:NOG287577
            InParanoid:Q9VJ16 OMA:EIDVEIC OrthoDB:EOG4GHX5R GenomeRNAi:35168
            NextBio:792196 Uniprot:Q9VJ16
        Length = 507

 Score = 124 (48.7 bits), Expect = 8.8e-05, P = 8.8e-05
 Identities = 39/118 (33%), Positives = 62/118 (52%)

Query:    78 TEEVQRFQAEGENINKLEKADILELTVRHLHRITKPHNPTEEVQRFQAGFTQCASEACGF 137
             T+  +  + + ++  KLEKADILELTVRH  R     +PT  V +++AG+T CA E   +
Sbjct:    83 TQNAKNGEGQAKH-TKLEKADILELTVRHFQRHRNLDDPT--VNKYRAGYTDCAREVARY 139

Query:   138 LLS--------LPGLDTRVGK-RLVEHLGKRISQ-SLEANPALLLSNGESFSPAGGYE 185
             L +        +P L     K RL+ HL + I++  +E  P    +  ES S +  ++
Sbjct:   140 LATPEPPPMGTMPTLAEPGSKARLLRHLDQCIAEIDVEICPHSTAAFAESPSSSSCFD 197


>UNIPROTKB|F1N0L3 [details] [associations]
            symbol:HES2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 CTD:54626 KO:K09087
            OMA:EGYSACV EMBL:DAAA02043087 IPI:IPI01000073 RefSeq:NP_001185934.1
            UniGene:Bt.36457 Ensembl:ENSBTAT00000028261 GeneID:516433
            KEGG:bta:516433 NextBio:20872221 Uniprot:F1N0L3
        Length = 165

 Score = 109 (43.4 bits), Expect = 0.00019, P = 0.00019
 Identities = 27/80 (33%), Positives = 40/80 (50%)

Query:    87 EGENINKLEKADILELTVRHLHRITKPHNPTEEV---QRFQAGFTQCASEACGFLLSLPG 143
             E    +KLEKADILE+TVR L  +     PT        ++ G+  C +     L +   
Sbjct:    47 ESSRYSKLEKADILEMTVRFLQELPASSGPTAAPTPSDSYREGYRACLARLARVLPTCRV 106

Query:   144 LDTRVGKRLVEHLGKRISQS 163
             L+  V  RL+EHL +R + +
Sbjct:   107 LEPAVSARLLEHLRRRAASA 126


>FB|FBgn0001168 [details] [associations]
            symbol:h "hairy" species:7227 "Drosophila melanogaster"
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA;TAS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=NAS;IMP;IDA;TAS;IPI]
            [GO:0070888 "E-box binding" evidence=IDA] [GO:0000978 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding" evidence=IDA] [GO:0001078 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in negative regulation of transcription"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0008134 "transcription factor
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0008407 "chaeta morphogenesis" evidence=NAS] [GO:0007366
            "periodic partitioning by pair rule gene" evidence=NAS;TAS]
            [GO:0007460 "R8 cell fate commitment" evidence=NAS] [GO:0007435
            "salivary gland morphogenesis" evidence=IGI;IMP;TAS] [GO:0000902
            "cell morphogenesis" evidence=IMP] [GO:0035239 "tube morphogenesis"
            evidence=IMP] [GO:0007431 "salivary gland development"
            evidence=TAS] [GO:0016044 "cellular membrane organization"
            evidence=TAS] [GO:0007399 "nervous system development"
            evidence=TAS] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0035289 "posterior head segmentation"
            evidence=TAS] [GO:0035290 "trunk segmentation" evidence=TAS]
            [GO:0007424 "open tracheal system development" evidence=IMP]
            [GO:0031323 "regulation of cellular metabolic process"
            evidence=IMP] [GO:0001666 "response to hypoxia" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            EMBL:AE014296 GO:GO:0007435 GO:GO:0001078 GO:GO:0001666
            GO:GO:0000978 GO:GO:0000902 GO:GO:0007366 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0016044 GO:GO:0070888 InterPro:IPR018352
            SMART:SM00511 GO:GO:0035289 GO:GO:0007424 GO:GO:0007460
            eggNOG:NOG319418 KO:K09090 OrthoDB:EOG4M37RH GO:GO:0035290
            GO:GO:0035239 EMBL:X15904 EMBL:X15905 EMBL:AY055833 EMBL:AY055834
            EMBL:AY055835 EMBL:AY055836 EMBL:AY055837 EMBL:AY055838
            EMBL:AY055839 EMBL:AY055840 EMBL:AY055841 EMBL:AY055842
            EMBL:AY119633 PIR:S06956 RefSeq:NP_001014577.1 RefSeq:NP_523977.2
            UniGene:Dm.2554 ProteinModelPortal:P14003 SMR:P14003 DIP:DIP-637N
            IntAct:P14003 STRING:P14003 EnsemblMetazoa:FBtr0076569
            EnsemblMetazoa:FBtr0100153 GeneID:38995 KEGG:dme:Dmel_CG6494
            UCSC:CG6494-RA CTD:38995 FlyBase:FBgn0001168
            GeneTree:ENSGT00700000104168 InParanoid:P14003 OMA:NGMQVIP
            PhylomeDB:P14003 ChiTaRS:FUT1 GenomeRNAi:38995 NextBio:811370
            Bgee:P14003 GermOnline:CG6494 Uniprot:P14003
        Length = 337

 Score = 118 (46.6 bits), Expect = 0.00021, P = 0.00021
 Identities = 28/76 (36%), Positives = 43/76 (56%)

Query:    92 NKLEKADILELTVRHLHRITKPHNPTEE------VQRFQAGFTQCASEACGFLLSLPGLD 145
             +KLEKADILE TV+HL  + +     ++      V +F+AGF  C +E   F    PG++
Sbjct:    70 SKLEKADILEKTVKHLQELQRQQAAMQQAADPKIVNKFKAGFADCVNEVSRF----PGIE 125

Query:   146 TRVGKRLVEHLGKRIS 161
                 +RL++HL   I+
Sbjct:   126 PAQRRRLLQHLSNCIN 141


>FB|FBgn0027788 [details] [associations]
            symbol:Hey "Hairy/E(spl)-related with YRPW motif"
            species:7227 "Drosophila melanogaster" [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=ISS] [GO:0045746 "negative
            regulation of Notch signaling pathway" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 EMBL:AE013599
            GO:GO:0007275 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0007219 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GO:GO:0045746
            GeneTree:ENSGT00700000104130 eggNOG:NOG241271 KO:K09091
            EMBL:AF151523 EMBL:BT029144 RefSeq:NP_523657.1 UniGene:Dm.516
            ProteinModelPortal:Q7KM13 SMR:Q7KM13 IntAct:Q7KM13 STRING:Q7KM13
            PRIDE:Q7KM13 EnsemblMetazoa:FBtr0088869 GeneID:35764
            KEGG:dme:Dmel_CG11194 CTD:100188776 FlyBase:FBgn0027788
            InParanoid:Q7KM13 OMA:TIEGMDI OrthoDB:EOG4MPG67 PhylomeDB:Q7KM13
            GenomeRNAi:35764 NextBio:795108 Bgee:Q7KM13 Uniprot:Q7KM13
        Length = 425

 Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
 Identities = 45/174 (25%), Positives = 82/174 (47%)

Query:    87 EGENINKLEKADILELTVRHLHRITKP------HNPTEEVQRFQA-GFTQCASEACGFLL 139
             E +   KLEKA+IL+LTV HL  +         ++P      +   GF +CA+E   +L+
Sbjct:   132 EKQGSAKLEKAEILQLTVEHLKSLQSKTLDSLSYDPQRVAMDYHIIGFRECAAEVARYLV 191

Query:   140 SLPGLDTR--VGKRLVEHLGKRISQSLEANPALLLSNGESFSPAG----GYERDDYATLP 193
             ++ G+D +  +  RL+ HL   + Q  E +     S G  +SPA     GY+ +  A   
Sbjct:   192 TIEGMDIQDPLRLRLMSHLQYFVQQR-ELSAKSCASPG-GWSPAAPSSSGYQPNCAAAPY 249

Query:   194 RDARVPSSLGS--ATQDSLRSGVADNASSQSSAMMLPQ-SNPGMSLNLPNSSLH 244
             +    P++ G+  ++  +L +  +  A        + + S   ++ +LP+  LH
Sbjct:   250 QSYAAPANPGAYVSSYPTLSASPSQQAQQLGGRTSVSRTSGSAVTESLPSHDLH 303


>UNIPROTKB|E1BP65 [details] [associations]
            symbol:HES4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 CTD:57801 KO:K09089
            OMA:GPWRPWL EMBL:DAAA02043249 IPI:IPI00694948 RefSeq:XP_002694182.1
            RefSeq:XP_584091.2 Ensembl:ENSBTAT00000019571 GeneID:507480
            KEGG:bta:507480 NextBio:20868081 Uniprot:E1BP65
        Length = 222

 Score = 112 (44.5 bits), Expect = 0.00038, P = 0.00038
 Identities = 29/76 (38%), Positives = 41/76 (53%)

Query:    87 EGENINKLEKADILELTVRHLHRITKPH------NPTEEVQRFQAGFTQCASEACGFLLS 140
             E    +KLEKADILELTVRHL  + +        +    + +++AGF +C +E   FL  
Sbjct:    68 ESSRRSKLEKADILELTVRHLQSLRRVQVTAALRSDPAILGKYRAGFHECLAEVNRFLAG 127

Query:   141 LPGLDTRVGKRLVEHL 156
               G+   V  RL+ HL
Sbjct:   128 CEGVPADVRSRLLCHL 143


>MGI|MGI:1859852 [details] [associations]
            symbol:Hes6 "hairy and enhancer of split 6 (Drosophila)"
            species:10090 "Mus musculus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0003712
            "transcription cofactor activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IDA;IMP]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IMP] [GO:0008134
            "transcription factor binding" evidence=NAS] [GO:0030154 "cell
            differentiation" evidence=IDA] [GO:0046983 "protein dimerization
            activity" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 MGI:MGI:1859852 GO:GO:0007399 GO:GO:0030154
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006357 GO:GO:0006351
            GO:GO:0005667 GO:GO:0003712 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 GeneTree:ENSGT00700000104130 eggNOG:NOG241578
            HOGENOM:HOG000236346 KO:K09087 CTD:55502 HOVERGEN:HBG107098
            OMA:EGSSFQD OrthoDB:EOG4G7C0H ChiTaRS:HES6 EMBL:AB035178
            EMBL:AF247040 EMBL:AF260236 EMBL:AK013443 EMBL:AK076135
            EMBL:AK155340 EMBL:BC012897 IPI:IPI00119301 RefSeq:NP_062352.1
            UniGene:Mm.280029 ProteinModelPortal:Q9JHE6 SMR:Q9JHE6
            STRING:Q9JHE6 PhosphoSite:Q9JHE6 PRIDE:Q9JHE6
            Ensembl:ENSMUST00000086851 GeneID:55927 KEGG:mmu:55927
            UCSC:uc007cau.1 InParanoid:Q9JHE6 NextBio:311596 Bgee:Q9JHE6
            CleanEx:MM_HES6 Genevestigator:Q9JHE6 GermOnline:ENSMUSG00000067071
            Uniprot:Q9JHE6
        Length = 224

 Score = 109 (43.4 bits), Expect = 0.00087, P = 0.00087
 Identities = 54/189 (28%), Positives = 81/189 (42%)

Query:    70 RITKPHDPTEEVQRFQAEGENINKLEKADILELTVRHLHRITKPH-NPTEEVQ-----RF 123
             R  + ++  +E++   A  E   KLE A++LELTVR +    +      E++Q     RF
Sbjct:    37 RRARINESLQELRLLLAGTEVQAKLENAEVLELTVRRVQGALRGRAREREQLQAEASERF 96

Query:   124 QAGFTQCASEACGFLLSLPGLDTRVGKRLVEHLGKRISQSLEANPALLLSNGESFSPAGG 183
              AG+ QC  E   F+ +   +D  V   L+ HL       LE+ P   L  G SF    G
Sbjct:    97 AAGYIQCMHEVHTFVSTCQAIDATVSAELLNHL-------LESMP---LREGSSFQDLLG 146

Query:   184 YERDDYATLPRDA-RVPSSLGSATQDSLRS--GVADNASSQSSAMMLPQSN--PGMSLNL 238
                D  A LP  + R     G + +  L S  G  D+  S    +   + N  P    +L
Sbjct:   147 ---DSLAGLPGGSGRSSWPPGGSPESPLSSPPGPGDDLCSDLEEIPEAELNRVPAEGPDL 203

Query:   239 PNSSLHPYT 247
              ++SL   T
Sbjct:   204 VSTSLGSLT 212


>UNIPROTKB|F1RIL7 [details] [associations]
            symbol:HES2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 KO:K09087 OMA:EGYSACV
            EMBL:FP102449 RefSeq:XP_003127577.1 Ensembl:ENSSSCT00000003743
            GeneID:100515666 KEGG:ssc:100515666 Uniprot:F1RIL7
        Length = 165

 Score = 104 (41.7 bits), Expect = 0.00097, P = 0.00097
 Identities = 26/76 (34%), Positives = 39/76 (51%)

Query:    87 EGENINKLEKADILELTVRHLHRITKPHNPTE---EVQRFQAGFTQCASEACGFLLSLPG 143
             E  + +KLEKADILE+TVR L  +     PT        ++ G+  C +     L +   
Sbjct:    47 ESSHYSKLEKADILEMTVRFLQELPASSCPTAAPTSSDSYREGYRACLARLARVLPACRV 106

Query:   144 LDTRVGKRLVEHLGKR 159
             L+  +  RL+EHL +R
Sbjct:   107 LEPALSARLLEHLRRR 122


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.132   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      332       332   0.00090  116 3  11 22  0.42    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  45
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  219 KB (2119 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  31.29u 0.10s 31.39t   Elapsed:  00:00:19
  Total cpu time:  31.30u 0.10s 31.40t   Elapsed:  00:00:19
  Start:  Thu Aug 15 13:33:25 2013   End:  Thu Aug 15 13:33:44 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with E(spl)mdelta-HLH E(spl)mdelta-HLH E(spl)mdelta-HLH Enhancer of split mdelta, helix-loop-helix	protein from Drosophila melanogaster	2.2e-11
BLAST match view associations BLAST with E(spl)m7-HLH E(spl)m7-HLH E(spl)m7-HLH Enhancer of split m7, helix-loop-helix	protein from Drosophila melanogaster	7.8e-11
BLAST match view associations BLAST with E(spl)mgamma-HLH E(spl)mgamma-HLH E(spl)mgamma-HLH Enhancer of split mgamma, helix-loop-helix	protein from Drosophila melanogaster	1.3e-10
BLAST match view associations BLAST with her8a her8a her8a hairy-related 8a	gene_product from Danio rerio	5.6e-10
BLAST match view associations BLAST with E(spl)mbeta-HLH E(spl)mbeta-HLH E(spl)mbeta-HLH Enhancer of split mbeta, helix-loop-helix	protein from Drosophila melanogaster	5.5e-09
BLAST match view associations BLAST with HES4 HES4 HES4 Uncharacterized protein	protein from Canis lupus familiaris	2.7e-08
BLAST match view associations BLAST with dpn dpn dpn deadpan	protein from Drosophila melanogaster	3.8e-08
BLAST match view associations BLAST with HES2 HES2 HES2 Transcription factor HES-2	protein from Homo sapiens	9.5e-08
BLAST match view associations BLAST with Hes1 Hes1 Hes1 hairy and enhancer of split 1 (Drosophila)	gene from Rattus norvegicus	9.3e-07
BLAST match view associations BLAST with her9 her9 her9 hairy-related 9	gene_product from Danio rerio	1.3e-06
BLAST match view associations BLAST with her8.2 her8.2 her8.2 hairy-related 8.2	gene_product from Danio rerio	2.0e-06
BLAST match view associations BLAST with hes4-a hes4-a hes4-a Transcription factor HES-4-A	protein from Xenopus laevis	6.0e-06
BLAST match view associations BLAST with her6 her6 her6 hairy-related 6	gene_product from Danio rerio	7.0e-06
BLAST match view associations BLAST with hes4-b hes4-b hes4-b Transcription factor HES-4-B	protein from Xenopus laevis	9.8e-06
BLAST match view associations BLAST with hes4 hes4 hes4 Transcription factor HES-4	protein from Xenopus (Silurana) tropicalis	1.0e-05
BLAST match view associations BLAST with Hes1 Hes1 Hes1 hairy and enhancer of split 1 (Drosophila)	protein from Mus musculus	1.0e-05
BLAST match view associations BLAST with hes1-b hes1-b hes1-b Transcription factor HES-1-B	protein from Xenopus laevis	1.2e-05
BLAST match view associations BLAST with HES4 HES4 HES4 Uncharacterized protein	protein from Canis lupus familiaris	1.2e-05
BLAST match view associations BLAST with HES1 HES1 HES1 Transcription factor HES-1	protein from Bos taurus	1.3e-05
BLAST match view associations BLAST with HES1 HES1 HES1 Transcription factor HES-1	protein from Homo sapiens	1.3e-05
BLAST match view associations BLAST with HES1 HES1 HES1 Uncharacterized protein	protein from Sus scrofa	1.3e-05
BLAST match view associations BLAST with HES4 HES4 HES4 Uncharacterized protein	protein from Canis lupus familiaris	1.5e-05
BLAST match view associations BLAST with HES1 HES1 HES1 Transcription factor HES-1	protein from Bos taurus	1.6e-05
BLAST match view associations BLAST with LOC100037036 LOC100037036 LOC100037036 LOC100037036 protein	protein from Xenopus laevis	2.4e-05
BLAST match view associations BLAST with hes1 hes1 hes1 Transcription factor HES-1	protein from Xenopus (Silurana) tropicalis	2.6e-05
BLAST match view associations BLAST with hes1-a hes1-a hes1-a Transcription factor HES-1-A	protein from Xenopus laevis	2.6e-05
BLAST match view associations BLAST with HES4 HES4 HES4 Transcription factor HES-4	protein from Homo sapiens	3.5e-05
BLAST match view associations BLAST with LOC100739264 LOC100739264 LOC100739264 Uncharacterized protein	protein from Sus scrofa	3.5e-05
BLAST match view associations BLAST with HES4 HES4 HES4 Transcription factor HES-4	protein from Homo sapiens	4.2e-05
BLAST match view associations BLAST with HES4 HES4 HES4 Transcription factor HES-4	protein from Homo sapiens	6.0e-05
BLAST match view associations BLAST with HES1 HES1 HES1 Transcription factor HES-1	protein from Gallus gallus	7.0e-05
BLAST match view associations BLAST with LOC100622397 LOC100622397 LOC100622397 Uncharacterized protein	protein from Sus scrofa	7.6e-05
BLAST match view associations BLAST with her13 her13 her13 hairy-related 13	gene_product from Danio rerio	7.6e-05
BLAST match view associations BLAST with Side Side Side similar to Deadpan	protein from Drosophila melanogaster	8.8e-05
BLAST match view associations BLAST with HES2 HES2 HES2 Uncharacterized protein	protein from Bos taurus	0.00019
BLAST match view associations BLAST with h h h hairy	protein from Drosophila melanogaster	0.00021
BLAST match view associations BLAST with Hey Hey Hey Hairy/E(spl)-related with YRPW motif	protein from Drosophila melanogaster	0.00032
BLAST match view associations BLAST with HES4 HES4 HES4 Uncharacterized protein	protein from Bos taurus	0.00038
BLAST match view associations BLAST with Hes6 Hes6 Hes6 hairy and enhancer of split 6	protein from Mus musculus	0.00087
BLAST match view associations BLAST with HES2 HES2 HES2 Uncharacterized protein	protein from Sus scrofa	0.00097