Query psy14695
Match_columns 241
No_of_seqs 227 out of 1407
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 18:16:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14695.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14695hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ci0_A Protein (PNP oxidase); 100.0 9.7E-59 3.3E-63 405.2 19.6 198 32-241 26-228 (228)
2 2a2j_A Pyridoxamine 5'-phospha 100.0 3.6E-56 1.2E-60 392.5 18.5 191 33-241 53-244 (246)
3 1nrg_A Pyridoxine 5'-phosphate 100.0 1.6E-55 5.4E-60 391.5 20.8 196 33-241 49-261 (261)
4 1dnl_A Pyridoxine 5'-phosphate 100.0 2E-55 6.8E-60 376.6 19.1 195 33-241 4-199 (199)
5 1ty9_A Phenazine biosynthesis 100.0 1.6E-54 5.6E-59 377.1 17.8 191 35-241 31-222 (222)
6 2i51_A Uncharacterized conserv 100.0 3.3E-46 1.1E-50 318.4 15.6 180 40-241 2-195 (195)
7 2ou5_A Pyridoxamine 5'-phospha 100.0 5.3E-38 1.8E-42 263.6 14.5 145 61-241 26-175 (175)
8 3dmb_A Putative general stress 99.9 2.2E-24 7.5E-29 175.0 11.3 117 61-216 17-136 (147)
9 2qea_A Putative general stress 99.9 3.1E-24 1.1E-28 176.3 11.8 117 61-218 14-134 (160)
10 2re7_A Uncharacterized protein 99.9 2.1E-23 7.3E-28 164.7 11.7 116 61-214 16-134 (134)
11 2iab_A Hypothetical protein; N 99.9 5.7E-23 1.9E-27 167.9 12.3 131 61-236 22-153 (155)
12 2hhz_A Pyridoxamine 5'-phospha 99.9 3E-21 1E-25 155.9 14.2 119 61-216 12-132 (150)
13 3u35_A General stress protein; 99.9 4.2E-22 1.4E-26 168.0 9.0 125 61-225 36-163 (182)
14 2ig6_A NIMC/NIMA family protei 99.9 1.8E-21 6.1E-26 158.6 11.5 116 61-216 28-144 (150)
15 2i02_A General stress protein 99.9 6.1E-21 2.1E-25 153.1 13.4 117 61-215 20-139 (148)
16 2hq7_A Protein, related to gen 99.8 5.5E-20 1.9E-24 146.6 11.1 116 61-215 16-134 (146)
17 3ec6_A General stress protein 99.8 2.1E-19 7.2E-24 143.2 12.5 117 61-215 13-130 (139)
18 3db0_A LIN2891 protein; putati 99.8 1.4E-18 4.9E-23 136.0 13.6 111 61-212 15-127 (128)
19 2fhq_A Putative general stress 99.7 1.5E-17 5.1E-22 131.7 13.4 113 61-213 18-132 (141)
20 1vl7_A Hypothetical protein AL 99.7 6.8E-18 2.3E-22 137.5 10.9 125 61-213 28-154 (157)
21 2asf_A Hypothetical protein RV 99.7 4.3E-16 1.5E-20 123.7 14.9 114 61-215 19-134 (137)
22 3f7e_A Pyridoxamine 5'-phospha 99.7 3.1E-16 1E-20 123.5 12.6 117 61-212 13-130 (131)
23 1rfe_A Hypothetical protein RV 99.6 6.2E-15 2.1E-19 119.3 15.2 121 62-215 21-148 (162)
24 3ba3_A Protein LP_0091, pyrido 99.6 2.3E-15 7.7E-20 122.7 9.9 115 61-214 12-135 (145)
25 2aq6_A Pyridoxine 5'-phosphate 99.6 7.8E-15 2.7E-19 116.7 12.3 76 61-143 15-92 (147)
26 3tgv_A Heme-binding protein HU 99.5 1.2E-13 4E-18 112.0 11.0 82 61-143 12-94 (148)
27 2htd_A Predicted flavin-nucleo 99.5 1E-13 3.5E-18 111.2 9.9 74 64-143 39-113 (140)
28 2arz_A Hypothetical protein PA 99.4 2.9E-12 1E-16 111.3 14.3 123 61-215 17-142 (247)
29 2q9k_A Uncharacterized protein 99.4 8.4E-13 2.9E-17 107.7 8.9 76 61-144 19-96 (151)
30 2fg9_A 5-nitroimidazole antibi 99.4 7E-12 2.4E-16 104.2 13.7 121 62-213 37-170 (178)
31 3cp3_A Uncharacterized protein 99.4 7.6E-12 2.6E-16 100.6 12.9 111 61-213 25-139 (148)
32 3swj_A CHUZ, putative uncharac 99.3 2E-11 6.8E-16 107.4 13.5 124 61-213 96-223 (251)
33 2hq9_A MLL6688 protein; struct 99.3 8.7E-11 3E-15 94.1 13.2 78 61-144 17-94 (149)
34 2hti_A BH0577 protein; structu 99.2 1.9E-10 6.5E-15 95.7 14.6 80 62-143 24-110 (185)
35 2fur_A Hypothetical protein; s 99.2 1.7E-10 5.8E-15 98.2 12.3 81 61-143 30-117 (209)
36 3u5w_A Putative uncharacterize 99.2 4.3E-10 1.5E-14 90.8 12.7 77 61-143 20-96 (148)
37 1xhn_A CREG, cellular represso 99.1 3.7E-10 1.3E-14 94.1 12.3 124 61-214 28-167 (184)
38 3gas_A Heme oxygenase; FMN-bin 99.1 1.4E-09 4.8E-14 96.1 13.5 124 61-214 96-224 (259)
39 2vpa_A NIMA-related protein; c 99.1 1.1E-09 3.7E-14 94.0 12.5 81 61-143 53-146 (216)
40 3fkh_A Putative pyridoxamine 5 99.0 3.9E-09 1.3E-13 84.8 12.9 76 61-143 19-94 (138)
41 3dnh_A Uncharacterized protein 99.0 3.1E-09 1.1E-13 93.5 13.2 121 61-213 37-159 (258)
42 3a6r_A FMN-binding protein; el 98.4 6.3E-07 2.2E-11 70.7 7.5 78 63-143 13-95 (122)
43 3in6_A FMN-binding protein; st 98.2 3.2E-06 1.1E-10 68.7 7.1 70 65-140 32-105 (148)
44 2ol5_A PAI 2 protein; structur 98.0 0.00022 7.6E-09 60.2 14.8 78 62-142 21-111 (202)
45 3r5l_A Deazaflavin-dependent n 97.3 0.0012 3.9E-08 51.9 9.0 76 62-150 14-95 (122)
46 3r5y_A Putative uncharacterize 95.7 0.082 2.8E-06 42.5 9.8 75 63-150 39-119 (147)
47 3r5z_A Putative uncharacterize 95.4 0.13 4.6E-06 41.2 10.2 75 63-150 37-117 (145)
48 3h96_A F420-H2 dependent reduc 95.1 0.048 1.6E-06 43.7 6.6 77 62-150 29-113 (143)
49 2ptf_A Uncharacterized protein 58.5 15 0.00053 31.0 5.6 55 64-118 36-90 (233)
50 3b5m_A Uncharacterized protein 58.2 8.4 0.00029 31.9 3.8 53 66-118 7-65 (205)
51 1uv7_A General secretion pathw 48.2 35 0.0012 25.5 5.5 46 37-85 54-99 (110)
52 2iml_A Hypothetical protein; F 44.7 33 0.0011 28.3 5.3 56 63-118 14-70 (199)
53 2d5m_A Flavoredoxin; flavoprot 34.9 38 0.0013 27.0 4.1 56 65-120 16-74 (190)
54 3e4v_A NADH:FMN oxidoreductase 34.3 53 0.0018 26.2 4.9 56 65-120 20-78 (186)
55 1eje_A FMN-binding protein; st 32.6 54 0.0019 26.2 4.7 57 64-120 28-87 (192)
56 3bpk_A Nitrilotriacetate monoo 30.4 71 0.0024 25.8 5.1 57 64-120 29-92 (206)
57 3fge_A Putative flavin reducta 29.4 53 0.0018 26.6 4.2 56 65-120 30-91 (203)
58 2nr4_A Conserved hypothetical 29.2 52 0.0018 27.2 4.1 51 66-118 32-82 (213)
59 1ekz_A DSRBDIII, maternal effe 20.8 1.7E+02 0.0058 19.6 4.9 58 37-105 5-62 (76)
No 1
>1ci0_A Protein (PNP oxidase); B6 metabolism, structural genomics, PSI, protein structure initiative; HET: FMN; 2.70A {Saccharomyces cerevisiae} SCOP: b.45.1.1
Probab=100.00 E-value=9.7e-59 Score=405.24 Aligned_cols=198 Identities=26% Similarity=0.540 Sum_probs=186.7
Q ss_pred CCCCCCCCChHHHHHHHHHHHH-HhcCCCccccceEEEEeeC-CCCceeEEEEEeeEEeCCeEEEEeCCC-Cccchhccc
Q psy14695 32 QKIDPIPADPMQLFKSWFTHHS-ELHSDSNLVANVMNVSTAS-KDGRVNSRSLILRRLDEDGFVIMTDGR-SSKSKDLKE 108 (241)
Q Consensus 32 ~~~~~~~~~P~~lf~~Wl~~A~-~~~~~~~~~~~~~~LATv~-~dG~P~~R~V~lr~~d~~g~~F~T~~~-S~K~~eL~~ 108 (241)
+.+++++.||+.+|..||++|+ +++. .++++|+||||+ +||.|++|+|++++++++||+||||++ |+|++||++
T Consensus 26 l~~~~~~~~P~~~f~~wl~~A~~~~~~---~~~~~~~LATvd~~dG~P~~R~V~lk~~d~~g~~F~Tn~~~S~K~~eL~~ 102 (228)
T 1ci0_A 26 LNEKQLTDDPIDLFTKWFNEAKEDPRE---TLPEAITFSSAELPSGRVSSRILLFKELDHRGFTIYSNWGTSRKAHDIAT 102 (228)
T ss_dssp CCGGGCCSSHHHHHHHHHHHHHHCSSC---SCTTEEEEEEEETTTTEEEEEEEECCEECSSSEEEEEECSSSHHHHHHHH
T ss_pred CChhhcCCChHHHHHHHHHHHHhhcCC---CCCCEEEEEEeeCCCCCeEEEEEEEEEECCCEEEEEeCCCCCcchHHHhh
Confidence 3447789999999999999999 7887 899999999999 999999999999999988999999999 999999999
Q ss_pred CCcEEEEEEecCCcCCcccceeEEEEEEEEEeCCcchHhhhccCCccceeeEeecCCCCcC-ChHHHHHHHHHHHhhhcc
Q psy14695 109 NPNAAFTFLWINNVDGLYLARQIRIAGKVVQLETSNWIDIYEAEPLFCKIRAYVCHQGQPV-DWDTHKKNHDELLSKFEK 187 (241)
Q Consensus 109 NP~val~f~~~~~~~~~~~~rQVri~G~a~~~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i-~r~~l~~~~~~~~~~~~~ 187 (241)
||+|+|||+|+. ..+||||+|+|++++++++++||++||++|||+||+|+||++| +|+.|++++.++.++|++
T Consensus 103 NP~val~f~~~~------~~rqVrI~G~ae~v~~~~~~~yf~~rp~~s~i~awas~qs~~i~~r~~l~~~~~~~~~~f~~ 176 (228)
T 1ci0_A 103 NPNAAIVFFWKD------LQRQVRVEGITEHVNRETSERYFKTRPRGSKIGAWASRQSDVIKNREELDELTQKNTERFKD 176 (228)
T ss_dssp CCEEEEEEEETT------TTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHCCTTCEESCHHHHHHHHHHHHHHTTS
T ss_pred CCeEEEEEEeCC------CCEEEEEEEEEEEcCchhhHHHHHhCCHHHhhceeeCCCCcccCCHHHHHHHHHHHHHhhcC
Confidence 999999999999 8999999999999999999999999999999999999999999 999999999999999987
Q ss_pred CCCCCCCCCceEEEEEEeeEEEEeecCCCCceeEEEEEEcC-CCCCCceEEEecC
Q psy14695 188 GQHDLARPDHVIAYKLFPTFMDFYESHGLKIADRLKYVRDN-ENAKDWECTRIAA 241 (241)
Q Consensus 188 ~~~~~p~p~~w~~~~l~P~~iEfw~~~~~r~h~R~~y~~~~-~~~~~W~~~rL~P 241 (241)
++ ++|+|++||||+|+|++|||||++++|+|+|++|.++. + ++|+.+||+|
T Consensus 177 ~~-~~p~p~~w~g~rv~P~~iEfWq~~~~rlHdR~~y~r~~~~--~~W~~~rL~P 228 (228)
T 1ci0_A 177 AE-DIPCPDYWGGLRIVPLEIEFWQGRPSRLHDRFVYRRKTEN--DPWKVVRLAP 228 (228)
T ss_dssp CS-SCCCCTTEEEEEEEEEEEEEEECCTTSCCEEEEEECSSTT--SCCEEEEECC
T ss_pred CC-CCCCCCcEEEEEEEccEEEEeeCCCCCcEEEEEEEecCCC--CCeEEEEecC
Confidence 62 39999999999999999999999999999999999962 2 2599999998
No 2
>2a2j_A Pyridoxamine 5'-phosphate oxidase; beta barrel, structural genomics, mycobacterium tuberculosis structural proteomics project, XMTB; HET: CME; 2.50A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=100.00 E-value=3.6e-56 Score=392.46 Aligned_cols=191 Identities=22% Similarity=0.424 Sum_probs=181.9
Q ss_pred CCCCCCCChHHHHHHHHHHHHHhcCCCccccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcE
Q psy14695 33 KIDPIPADPMQLFKSWFTHHSELHSDSNLVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNA 112 (241)
Q Consensus 33 ~~~~~~~~P~~lf~~Wl~~A~~~~~~~~~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~v 112 (241)
.+++++.||++||..||++|++++. .++++|+||||+ +|.|++|+|++++++++||+||||++|+|++||++||+|
T Consensus 53 ~~~~~~~~P~~~f~~Wl~~A~~~~~---~e~~~~~LATvd-dG~P~~R~Vllk~~d~~gl~F~Tn~~S~K~~eL~~NP~v 128 (246)
T 2a2j_A 53 DFDWLDDGWLTLLRRWLNDAQRAGV---SEPNAMVLATVA-DGKPVTRSVLCKILDESGVAFFTSYTSAKGEQLAVTPYA 128 (246)
T ss_dssp CGGGGTTHHHHHHHHHHHHHHHTTC---SSTTEEEEEEEE-TTEEEEEEEEEEEEETTEEEEEEETTSHHHHHHHHSCEE
T ss_pred ChhhcCCCHHHHHHHHHHHHHhccC---CCCceEEEEEcC-CCceEEEEEEEEEEcCCEEEEEEcCCChhhHHHhhCCeE
Confidence 3467889999999999999999988 899999999999 999999999999999999999999999999999999999
Q ss_pred EEEEEecCCcCCcccceeEEEEEEEEEeCCcchHhhhccCCccceeeEeecCCCCcC-ChHHHHHHHHHHHhhhccCCCC
Q psy14695 113 AFTFLWINNVDGLYLARQIRIAGKVVQLETSNWIDIYEAEPLFCKIRAYVCHQGQPV-DWDTHKKNHDELLSKFEKGQHD 191 (241)
Q Consensus 113 al~f~~~~~~~~~~~~rQVri~G~a~~~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i-~r~~l~~~~~~~~~~~~~~~~~ 191 (241)
+|||+|+. ..+||||+|+|++++++++++||++||++|||+||+|+||++| +|+.|+++++++.++|+++. +
T Consensus 129 aL~f~~~~------~~rqVrI~G~ae~v~~~es~~yf~srp~~sqi~awas~QS~~i~~r~~L~~~~~~~~~~f~~~~-~ 201 (246)
T 2a2j_A 129 SATFPWYQ------LGRQAHVQGPVSKVSTEEIFTYWSMRPRGAQLGAWASQQSRPVGSRAQLDNQLAEVTRRFADQD-Q 201 (246)
T ss_dssp EEEEEEGG------GTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHSCTTCCCCCSHHHHHHHHHHHHHHTTCS-S
T ss_pred EEEEEeCC------CCEEEEEEEEEEEeccHhHHHHHHhCCHhhhceEEeCCCCcccCCHHHHHHHHHHHHHhcccCC-C
Confidence 99999999 8999999999999999999999999999999999999999999 99999999999988897653 5
Q ss_pred CCCCCceEEEEEEeeEEEEeecCCCCceeEEEEEEcCCCCCCceEEEecC
Q psy14695 192 LARPDHVIAYKLFPTFMDFYESHGLKIADRLKYVRDNENAKDWECTRIAA 241 (241)
Q Consensus 192 ~p~p~~w~~~~l~P~~iEfw~~~~~r~h~R~~y~~~~~~~~~W~~~rL~P 241 (241)
+|+|++||||+|+|++|||||++++|+|+|++|.+ + +.+||+|
T Consensus 202 vp~pp~w~g~rv~P~~iEfWqg~~~rlHdR~~y~r---~----~~~rL~P 244 (246)
T 2a2j_A 202 IPVPPGWGGYRIAPEIVEFWQGRENRMHNRIRVAN---G----RLERLQP 244 (246)
T ss_dssp CCCCTTEEEEEECCSEEEEEECCTTSCCEEEEEET---T----EEEECCT
T ss_pred CCCCCcEEEEEEEcCEEEEccCCCCCCeEEEEEEC---C----CcEECCC
Confidence 89999999999999999999999999999999987 1 8999998
No 3
>1nrg_A Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidoreductase; HET: FMN PLP; 1.95A {Homo sapiens} SCOP: b.45.1.1 PDB: 3hy8_A*
Probab=100.00 E-value=1.6e-55 Score=391.54 Aligned_cols=196 Identities=30% Similarity=0.559 Sum_probs=186.2
Q ss_pred CCCCC-CCChHHHHHHHHHHHHHh-cCCCccccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCC
Q psy14695 33 KIDPI-PADPMQLFKSWFTHHSEL-HSDSNLVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENP 110 (241)
Q Consensus 33 ~~~~~-~~~P~~lf~~Wl~~A~~~-~~~~~~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP 110 (241)
.++++ +.||+.+|..||++|+++ +. .++++|+||||++||.|++|+|++++++++||+||||++|+|++||++||
T Consensus 49 ~~~~~~~~~P~~~f~~Wl~~A~~~~~l---~e~~~~~LATvd~dG~P~~R~V~lk~~d~~gl~F~Tn~~S~K~~eL~~NP 125 (261)
T 1nrg_A 49 EETHLTSLDPVKQFAAWFEEAVQCPDI---GEANAMCLATCTRDGKPSARMLLLKGFGKDGFRFFTNFESRKGKELDSNP 125 (261)
T ss_dssp CCSSCSCSSHHHHHHHHHHHHHHCTTC---SCTTEEEEEEECTTSCEEEEEEECCCEETTEEEEEEETTSHHHHHHHHSC
T ss_pred CHHHcCCCCHHHHHHHHHHHHHhhccC---CCCcEEEEEEECCCCCeeEEEEEEEEEcCCEEEEEECCCChhHHHHhhCC
Confidence 45677 899999999999999998 88 89999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEecCCcCCcccceeEEEEEEEEEeCCcchHhhhccCCccceeeEeecCCCCcC-ChHHHHHHHHHHHhhhccCC
Q psy14695 111 NAAFTFLWINNVDGLYLARQIRIAGKVVQLETSNWIDIYEAEPLFCKIRAYVCHQGQPV-DWDTHKKNHDELLSKFEKGQ 189 (241)
Q Consensus 111 ~val~f~~~~~~~~~~~~rQVri~G~a~~~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i-~r~~l~~~~~~~~~~~~~~~ 189 (241)
+|+|||+|+. ..+||||+|+|++++++++++||++||+++||+||+|+||++| +|+.|+++..++.++|+++
T Consensus 126 ~vaL~f~~~~------~~rqVrI~G~ae~v~d~e~~~~w~srp~~s~i~awas~Qs~~i~~r~~l~~~~~~~~~~f~~~- 198 (261)
T 1nrg_A 126 FASLVFYWEP------LNRQVRVEGPVKKLPEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQDQ- 198 (261)
T ss_dssp EEEEEEEEGG------GTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHCCTTSCCSCHHHHHHHHHHHHHHTTTS-
T ss_pred eEEEEEEeCC------CCEEEEEEEEEEEecCcchHHHHhcCChhhhhhhhcCCCCCccCCHHHHHHHHHHHHhhcccC-
Confidence 9999999999 8999999999999999999999999999999999999999999 9999999999999999876
Q ss_pred CCCCCCCceEEEEEEeeEEEEeecCCCCceeEEEEEEcC--------------CCCCCceEEEecC
Q psy14695 190 HDLARPDHVIAYKLFPTFMDFYESHGLKIADRLKYVRDN--------------ENAKDWECTRIAA 241 (241)
Q Consensus 190 ~~~p~p~~w~~~~l~P~~iEfw~~~~~r~h~R~~y~~~~--------------~~~~~W~~~rL~P 241 (241)
++|+|++||||+|+|++|||||++.+|+|+|++|.++. + ++|+.+||+|
T Consensus 199 -~vp~p~~w~g~rv~P~~vEfwq~~~~rlHdR~~y~r~~~~~~~~~~~~~~~~~--~~W~~~rL~P 261 (261)
T 1nrg_A 199 -EVPKPKSWGGYVLYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGPMTHRGE--EDWLYERLAP 261 (261)
T ss_dssp -CCCCCTTEEEEEECCSEEEEEECCTTSCCEEEEEEECSSTTSCCCCTTCEECS--TTEEEEECCC
T ss_pred -CCCCCCcEEEEEEEccEEEEEECCCCCCeEEEEEEECCccccccccccccCCC--CCeEEEEccC
Confidence 68999999999999999999999999999999999943 2 2699999998
No 4
>1dnl_A Pyridoxine 5'-phosphate oxidase; beta barrel, protein-FMN complex, oxidoreductase; HET: MSE FMN; 1.80A {Escherichia coli K12} SCOP: b.45.1.1 PDB: 1g79_A* 1g76_A* 1g78_A* 1g77_A* 1jnw_A* 1wv4_A*
Probab=100.00 E-value=2e-55 Score=376.62 Aligned_cols=195 Identities=27% Similarity=0.525 Sum_probs=185.8
Q ss_pred CCCCCCCChHHHHHHHHHHHHHhcCCCccccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcE
Q psy14695 33 KIDPIPADPMQLFKSWFTHHSELHSDSNLVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNA 112 (241)
Q Consensus 33 ~~~~~~~~P~~lf~~Wl~~A~~~~~~~~~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~v 112 (241)
++++++.||+++|+.||++|++++. .++++|+||||++||.|++|+|+++.++++||+|||+.+|+|++||++||+|
T Consensus 4 ~~~~~~~~p~~~f~~wl~~a~~~~~---~~~~~~~LATv~~dG~P~~R~v~~~~~d~~gl~F~T~~~S~K~~~L~~np~v 80 (199)
T 1dnl_A 4 RRRDLPADPLTLFERWLSQACEAKL---ADPTAMVVATVDEHGQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRV 80 (199)
T ss_dssp CGGGCCSSHHHHHHHHHHHHHHTTC---SCTTEEEEEEECTTSCEEEEEEECCEEETTEEEEEEETTSHHHHHHHHCCEE
T ss_pred ChhhcCCChHHHHHHHHHHHHHcCc---CCCcEEEEEEECCCCCEEEEEEEEEEEcCCEEEEEECCCCHHHHHHhhCCeE
Confidence 3467899999999999999999988 8999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCcCCcccceeEEEEEEEEEeCCcchHhhhccCCccceeeEeecCCCCcC-ChHHHHHHHHHHHhhhccCCCC
Q psy14695 113 AFTFLWINNVDGLYLARQIRIAGKVVQLETSNWIDIYEAEPLFCKIRAYVCHQGQPV-DWDTHKKNHDELLSKFEKGQHD 191 (241)
Q Consensus 113 al~f~~~~~~~~~~~~rQVri~G~a~~~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i-~r~~l~~~~~~~~~~~~~~~~~ 191 (241)
+|||+|+. ..+||||+|+|++++++++++||+++|+++|++||+|+||++| +|+.|+++..++.++|+++ +
T Consensus 81 ~l~f~~~~------~~~qvri~G~a~~v~d~~~~~~w~~~p~~s~~~aw~s~qs~~i~~r~~l~~~~~~~~~~~~~~--~ 152 (199)
T 1dnl_A 81 SLLFPWHT------LERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQG--E 152 (199)
T ss_dssp EEEECCGG------GTEEEEEEEEEEECCHHHHHHHHTTSCHHHHHHHHHCCTTSCCSCTHHHHHHHHHHHHHSTTS--S
T ss_pred EEEEEcCC------CCEEEEEEEEEEEeCCccHHHHHHhCChhhhcccccCCCCcccCCHHHHHHHHHHHHhhccCC--C
Confidence 99999998 8999999999999999999999999999999999999999999 9999999999999999866 6
Q ss_pred CCCCCceEEEEEEeeEEEEeecCCCCceeEEEEEEcCCCCCCceEEEecC
Q psy14695 192 LARPDHVIAYKLFPTFMDFYESHGLKIADRLKYVRDNENAKDWECTRIAA 241 (241)
Q Consensus 192 ~p~p~~w~~~~l~P~~iEfw~~~~~r~h~R~~y~~~~~~~~~W~~~rL~P 241 (241)
+|+|++||||+|+|++||||+++.+|+|+|++|.++++ +|+.+||+|
T Consensus 153 ~p~p~~~~~~~v~p~~vefw~~~~~rlh~R~~y~~~~~---~W~~~~l~P 199 (199)
T 1dnl_A 153 VPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQREND---AWKIDRLAP 199 (199)
T ss_dssp CCCCTTEEEEEECCSEEEEEECCGGGCCEEEEEEECSS---SEEEEECCC
T ss_pred CCCCCceEEEEEECCEEEEEecCCCCCceEEEEEECCC---CEEEEEecC
Confidence 89999999999999999999999999999999999643 599999998
No 5
>1ty9_A Phenazine biosynthesis protein PHZG; chorismate, oxidoreductase; HET: FMN; 1.80A {Pseudomonas fluorescens} SCOP: b.45.1.1 PDB: 1t9m_A*
Probab=100.00 E-value=1.6e-54 Score=377.11 Aligned_cols=191 Identities=23% Similarity=0.466 Sum_probs=179.4
Q ss_pred CCCCCChHHHHHHHHHHHHHhcCCCccccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEE
Q psy14695 35 DPIPADPMQLFKSWFTHHSELHSDSNLVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAF 114 (241)
Q Consensus 35 ~~~~~~P~~lf~~Wl~~A~~~~~~~~~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val 114 (241)
++++.||+++|..||++|++++. .++++|+||||++||.|++|+|++++++++||+||||++|+|++||++||+|+|
T Consensus 31 ~~~~~~P~~~f~~Wl~~A~~~~~---~~~~~~~LATvd~dG~P~~R~v~l~~~d~~gl~F~T~~~S~K~~eL~~nP~val 107 (222)
T 1ty9_A 31 QTLPADPMSVLHNWLERARRVGI---REPRALALATADSQGRPSTRIVVISEISDAGVVFSTHAGSQKGRELLHNPWASG 107 (222)
T ss_dssp HHCCSCHHHHHHHHHHHHHHHTC---SSTTEEEEEEECTTCCEEEEEEECCEECSSEEEEEEETTSHHHHHHHHCCEEEE
T ss_pred hccCCCHHHHHHHHHHHHHHhcc---CCCCEEEEEEECCCCCEEEEEEEEEEEcCCEEEEEECCCCcchHHHhhCCeEEE
Confidence 56789999999999999999998 899999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCcCCcccceeEEEEEEEEEeCCcchHhhhccCCccceeeEeecCCCCcC-ChHHHHHHHHHHHhhhccCCCCCC
Q psy14695 115 TFLWINNVDGLYLARQIRIAGKVVQLETSNWIDIYEAEPLFCKIRAYVCHQGQPV-DWDTHKKNHDELLSKFEKGQHDLA 193 (241)
Q Consensus 115 ~f~~~~~~~~~~~~rQVri~G~a~~~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i-~r~~l~~~~~~~~~~~~~~~~~~p 193 (241)
||+|+. ..+||||+|+|++++++++++||++||++||++||+|+||.+| +++.|++....+.++ ++ ++|
T Consensus 108 ~f~~~~------~~rqvrI~G~ae~v~~~~~~~~w~~rp~~s~i~A~as~qs~~~~~~~~l~~~~~~~~~~--~~--~~p 177 (222)
T 1ty9_A 108 VLYWRE------TSQQIILNGQAVRLPNAKADDAWLKRPYATHPMSSVSRQSEELQDVQAMRNAARQLAEL--QG--PLP 177 (222)
T ss_dssp EEEETT------TTEEEEEEEEEEECCHHHHHHHHHTSCGGGHHHHHHCCTTSBCCCHHHHHHHHHHHHTS--CS--CCC
T ss_pred EEEcCC------CCeEEEEEEEEEEEccHHhHHHHHhCccccccceeeccCCCcCCChHHHHHHHHHHhhc--cC--CCC
Confidence 999999 8999999999999999999999999999999999999999999 999999877666543 23 688
Q ss_pred CCCceEEEEEEeeEEEEeecCCCCceeEEEEEEcCCCCCCceEEEecC
Q psy14695 194 RPDHVIAYKLFPTFMDFYESHGLKIADRLKYVRDNENAKDWECTRIAA 241 (241)
Q Consensus 194 ~p~~w~~~~l~P~~iEfw~~~~~r~h~R~~y~~~~~~~~~W~~~rL~P 241 (241)
.|++||||+|+|++||||+++.+|+|+|++|.++++ +|+.+||+|
T Consensus 178 ~p~~w~~~rv~P~~vEfwq~~~~rlHdR~~y~~~~~---~W~~~rL~P 222 (222)
T 1ty9_A 178 RPEGYCVFELRLESLEFWGNGQERLHERLRYDRSDT---GWNVRRLQP 222 (222)
T ss_dssp CCTTEEEEEEEEEEEEEEEEEETTEEEEEEEEEETT---EEEEEEECC
T ss_pred CCCCEEEEEEEeeEEEEEECCCCCCcEEEEEEECCC---CEEEEEecC
Confidence 999999999999999999999999999999999654 499999998
No 6
>2i51_A Uncharacterized conserved protein of COG5135; pyridoxamine 5'-phosphate oxidase-related protein, structura genomics; HET: MSE FMN; 1.40A {Nostoc punctiforme}
Probab=100.00 E-value=3.3e-46 Score=318.40 Aligned_cols=180 Identities=18% Similarity=0.327 Sum_probs=159.0
Q ss_pred ChHHHHHHHHHHHHHhcCCCccccc--eEEEEeeCCCCceeEEEEEeeEEeCC--eEEEEeCCCCccchhcccCCcEEEE
Q psy14695 40 DPMQLFKSWFTHHSELHSDSNLVAN--VMNVSTASKDGRVNSRSLILRRLDED--GFVIMTDGRSSKSKDLKENPNAAFT 115 (241)
Q Consensus 40 ~P~~lf~~Wl~~A~~~~~~~~~~~~--~~~LATv~~dG~P~~R~V~lr~~d~~--g~~F~T~~~S~K~~eL~~NP~val~ 115 (241)
.|++.|+.||++|++++. .+|+ +|+|||||+||.|++|+|++++++++ +|+||||.+|+|++||++||+|+||
T Consensus 2 ~~~~~w~~wl~~a~~~~~---~~p~~~~~~LATv~~dG~P~~R~v~~~~~d~~~~~l~F~T~~~S~K~~~l~~np~v~l~ 78 (195)
T 2i51_A 2 MSLAPWRGAIAHALHRNR---SLVYARYLQLATVQPNGRPANRTLVFRGFLEDTNQLRFITDTRSAKADQIQQQPWAEIC 78 (195)
T ss_dssp CCCCTTHHHHHHHHHHTT---TCGGGGEEEEEEECTTSCEEEEEEECCCBCTTSSCEEEEEETTSHHHHHHHHCCEEEEE
T ss_pred CchhHHHHHHHHHHHhCC---CCCCCCEEEEEEECCCCCeeEEEEEEEEEcCCCCeEEEEEcCCccHHHHHhhCCeEEEE
Confidence 356789999999999887 5655 89999999999999999999999886 9999999999999999999999999
Q ss_pred EEecCCcCCcccceeEEEEEEEEEeCCcchH--------hhhccCCcccee-eEeecCCCCcC-ChHHHHHHHHHHHhhh
Q psy14695 116 FLWINNVDGLYLARQIRIAGKVVQLETSNWI--------DIYEAEPLFCKI-RAYVCHQGQPV-DWDTHKKNHDELLSKF 185 (241)
Q Consensus 116 f~~~~~~~~~~~~rQVri~G~a~~~~~~~~~--------~~f~~rp~~s~i-~a~~s~qs~~i-~r~~l~~~~~~~~~~~ 185 (241)
|+|+. ..+||||+|+|+++++++++ +||+++|..+|+ .+|+++ |++| +.. .++.++|
T Consensus 79 f~~~~------~~~qvri~G~a~~v~~~~~~~~~~~~r~~~w~~~~~~sr~~~~~~sp-g~~~~~~~------~~~~~~~ 145 (195)
T 2i51_A 79 WYFPN------TREQFRMAGDLTLISSDDSHQDLQPARIAMWQELSDAARLQFGWPYP-GKPRIKES------GAFEPSP 145 (195)
T ss_dssp EEETT------TTEEEEEEEEEEEECSSSTTGGGHHHHHHHHHHSCHHHHHGGGSCCT-TSBCCCCG------GGGCCCC
T ss_pred EEeCC------CCEEEEEEEEEEEEChHHhhhhhHHHHHHHHHhCChhhhhhcccCCC-CCCccchh------HHhhhhc
Confidence 99999 89999999999999998886 999999999999 489877 5888 443 1234455
Q ss_pred ccCCCCCCCCCceEEEEEEeeEEEEeecCCCCceeEEEEEEcCCCCCCceEEEecC
Q psy14695 186 EKGQHDLARPDHVIAYKLFPTFMDFYESHGLKIADRLKYVRDNENAKDWECTRIAA 241 (241)
Q Consensus 186 ~~~~~~~p~p~~w~~~~l~P~~iEfw~~~~~r~h~R~~y~~~~~~~~~W~~~rL~P 241 (241)
+ + .+|+|++||||+|+|++|||||++.+| |+|++|.++.++ +|+.+||+|
T Consensus 146 ~-~--~~p~p~~w~~~~v~P~~iefwq~~~~r-h~R~~y~~~~~~--~W~~~rl~P 195 (195)
T 2i51_A 146 P-D--PIEPVPNFCLLLLDPVQVDHLELRGEP-QNRWLYHRNDQQ--EWSSEAINP 195 (195)
T ss_dssp C-C--SSSCCTTEEEEEEEEEEEEEEESSSSS-CEEEEEEECTTS--CEEEEEBCC
T ss_pred c-C--CCCCCCceEEEEEEccEEEEEecCCCC-ceEEEEEECCCC--CEEEEEeCC
Confidence 4 3 678999999999999999999999999 999999996432 599999998
No 7
>2ou5_A Pyridoxamine 5'-phosphate oxidase-related, FMN-BI; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: MSE FMN; 1.60A {Jannaschia SP}
Probab=100.00 E-value=5.3e-38 Score=263.65 Aligned_cols=145 Identities=17% Similarity=0.248 Sum_probs=132.7
Q ss_pred ccc-ceEEEEeeCCCCceeEEEEEeeEEeC--CeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEE
Q psy14695 61 LVA-NVMNVSTASKDGRVNSRSLILRRLDE--DGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKV 137 (241)
Q Consensus 61 ~~~-~~~~LATv~~dG~P~~R~V~lr~~d~--~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a 137 (241)
.+| ++|+|||+++|| |++|+|+++++++ ++|+|+||.+|+|++||++||+|+|+|+|+. ..+||||+|+|
T Consensus 26 ~~p~~~~~LATv~~dG-P~~R~v~~~~~~~~~~~l~F~T~~~s~K~~~l~~nP~v~l~f~~~~------~~~qvri~G~a 98 (175)
T 2ou5_A 26 HHPARHPTLATIGTDG-PDLRTLVLRAASHAEATLEFHTDAASPKVAHIRRDARVAIHIWIPK------ASLQVRAKAIA 98 (175)
T ss_dssp TSGGGSCEEEEEETTE-EEEEECCCCEEETTTTEEEEEEETTSHHHHHHHHCCEEEEEEEEGG------GTEEEEEEEEE
T ss_pred CCCcceEEEEEeCCCC-CceeEEEEEEEEcCCCEEEEEECCCChHHHHHhhCCcEEEEEEeCC------CCEEEEEEEEE
Confidence 566 999999999999 9999999999974 6899999999999999999999999999999 89999999999
Q ss_pred EEeCCcchHhhhccCCccceeeEeec-CCCCcC-ChHHHHHHHHHHHhhhccCCCCCCCCCceEEEEEEeeEEEEeecCC
Q psy14695 138 VQLETSNWIDIYEAEPLFCKIRAYVC-HQGQPV-DWDTHKKNHDELLSKFEKGQHDLARPDHVIAYKLFPTFMDFYESHG 215 (241)
Q Consensus 138 ~~~~~~~~~~~f~~rp~~s~i~a~~s-~qs~~i-~r~~l~~~~~~~~~~~~~~~~~~p~p~~w~~~~l~P~~iEfw~~~~ 215 (241)
++++++ ++||+++|+.+|++ |.+ .||.+| + . -+|.|++|+||+|+|++|||||++.
T Consensus 99 ~~~~d~--~~~w~~~~~~~~~~-~~~~~~~~~~~~--~-----------------l~~~p~~~~~~~v~p~~vefw~~~~ 156 (175)
T 2ou5_A 99 KILPGD--PNLFAQLPEAARMN-YQGPVPGTPLPA--E-----------------PDATPNRFTRLICHLSEIDVLHLTT 156 (175)
T ss_dssp EEEECC--HHHHHHSCHHHHGG-GSSSCTTCBSSC--C-----------------CCCCSCCEEEEEEEEEEEEEEECCS
T ss_pred EEeCcH--HHHHHHCCHhHHhc-ccCCCCCCcccc--c-----------------cCCCCCcEEEEEEEeeEEEEEeCCC
Confidence 999887 89999999999998 776 599998 5 1 1467899999999999999999998
Q ss_pred CCceeEEEEEEcCCCCCCceEEEecC
Q psy14695 216 LKIADRLKYVRDNENAKDWECTRIAA 241 (241)
Q Consensus 216 ~r~h~R~~y~~~~~~~~~W~~~rL~P 241 (241)
+ |+|++|.++ + |+.+||+|
T Consensus 157 ~--h~R~~y~~~----~-W~~~~l~P 175 (175)
T 2ou5_A 157 P--HQRAVYTAP----D-WRGIWVSP 175 (175)
T ss_dssp S--CEEEEEETT----T-CCCEEECC
T ss_pred C--ceEEEEEcC----C-ceEEEecC
Confidence 8 999999883 2 99999998
No 8
>3dmb_A Putative general stress protein 26 with A PNP-OXI fold; PNP-oxidase like fold, structural genomics; HET: MSE; 2.30A {Xanthomonas campestris PV}
Probab=99.91 E-value=2.2e-24 Score=175.01 Aligned_cols=117 Identities=9% Similarity=0.063 Sum_probs=96.0
Q ss_pred cccceEEEEeeCCCCceeEEEEEee-EEeCCe-EEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILR-RLDEDG-FVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVV 138 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr-~~d~~g-~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~ 138 (241)
.+.++++|||+++|| |++|+|.+. +.+++| |||+|+..|+|+++|++||+|+|||+|+. ..+||+|+|+|+
T Consensus 17 ~~~~~~~LaT~~~d~-~~~~pm~~~~~~d~~g~l~F~T~~~s~K~~~l~~np~v~l~~~~~~------~~~~v~v~G~a~ 89 (147)
T 3dmb_A 17 KSDRTVMLGLDGVED-GHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKG------HDLFASISGSLR 89 (147)
T ss_dssp HHHCEEEEEETTSSS-CCCEEEEEECSSSSCCCEEEEECTTCTTHHHHTTCEEEEEEEECTT------SSEEEEEEEEEE
T ss_pred hcCCEEEEEEEcCCC-CceEeCccccccCCCceEEEEecCCcHHHHHHhhCCeEEEEEEcCC------CCeEEEEEEEEE
Confidence 457789999999886 899999986 334445 99999999999999999999999999998 789999999999
Q ss_pred EeCCcc-hHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCCCCCCCceEEEEEEeeEEEEeecCCC
Q psy14695 139 QLETSN-WIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHDLARPDHVIAYKLFPTFMDFYESHGL 216 (241)
Q Consensus 139 ~~~~~~-~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~~p~p~~w~~~~l~P~~iEfw~~~~~ 216 (241)
++++.+ .+++|. ..+..+|+++ +.+|+|++|+|.|+++|||+++.+
T Consensus 90 ~~~d~~~~~~~~~----------------------------~~~~~~~~~g----~~dp~~~vl~v~p~~~e~W~~~~~ 136 (147)
T 3dmb_A 90 EDTDPAVVDRLWN----------------------------PYVAAWYEGG----KDDPKLALLRLDADHAQIWLNGSS 136 (147)
T ss_dssp ECCCHHHHHHHCC----------------------------HHHHHHCTTG----GGCTTCEEEEEEEEEEEEEECCCC
T ss_pred EecCHHHHHHHhh----------------------------HHHHHHccCC----CCCCCEEEEEEEcCEEEEEECCCC
Confidence 998543 344553 1134456544 357899999999999999998865
No 9
>2qea_A Putative general stress protein 26; structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.46A {Jannaschia SP}
Probab=99.91 E-value=3.1e-24 Score=176.26 Aligned_cols=117 Identities=12% Similarity=0.075 Sum_probs=97.2
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeCCe--EEEEeCCCCccchhcccCCc-EEEEEEecCCcCCcccceeEEEEEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDEDG--FVIMTDGRSSKSKDLKENPN-AAFTFLWINNVDGLYLARQIRIAGKV 137 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g--~~F~T~~~S~K~~eL~~NP~-val~f~~~~~~~~~~~~rQVri~G~a 137 (241)
.+.++++||| ||.|++|+|++..++++| |||+|+..|+|+++|++||+ |+|+|+|+. ..+||+|+|+|
T Consensus 14 ~~~~~~~LaT---dG~P~~rpv~~~~~~~~g~~l~f~t~~~s~K~~~l~~np~~v~l~~~~~~------~~~~v~v~G~a 84 (160)
T 2qea_A 14 EDVRSGMLGI---KGQGRLIPMSPQTDDDAPGAIWFITAKGTDLAKGVAAGPQPAQFVVSDDG------EGLYADLDGTL 84 (160)
T ss_dssp TTCCCEEEEE---TTSSCCEEECCBCCTTSCSCEEEEEETTSHHHHHTSSSCEEEEEEEEETT------TTEEEEEEEEE
T ss_pred hcCCEEEEEe---CCCeeEEEeeeeEecCCCCEEEEEECCCCHHHHHHHhCCceEEEEEECCC------CCeEEEEEEEE
Confidence 4677899999 899999999998766566 99999999999999999999 999999998 88999999999
Q ss_pred EEeCCcchHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhh-hccCCCCCCCCCceEEEEEEeeEEEEeecCCC
Q psy14695 138 VQLETSNWIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSK-FEKGQHDLARPDHVIAYKLFPTFMDFYESHGL 216 (241)
Q Consensus 138 ~~~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~-~~~~~~~~p~p~~w~~~~l~P~~iEfw~~~~~ 216 (241)
+++.+ ++++++.+..+..+ |+++ |.+++|++|+|.|+++|||+++.+
T Consensus 85 ~~v~d----------------------------~~~~~~~~~~~~~~~~~~~----~~~p~~~v~~i~p~~~e~w~~~~~ 132 (160)
T 2qea_A 85 ERSTD----------------------------REALDEFWSFVADAWFDGG----QHDPDVCLLKFTPASGEISITEGG 132 (160)
T ss_dssp EEECC----------------------------HHHHHHSCCHHHHHHCTTC----SSCTTEEEEEEEEEEEEEEEECCS
T ss_pred EEEcC----------------------------HHHHHHHHHHHHHHHccCC----CCCCCEEEEEEECCEEEEEECCCC
Confidence 99874 33333333343333 4443 467899999999999999999888
Q ss_pred Cc
Q psy14695 217 KI 218 (241)
Q Consensus 217 r~ 218 (241)
|+
T Consensus 133 ~l 134 (160)
T 2qea_A 133 GA 134 (160)
T ss_dssp SH
T ss_pred hH
Confidence 76
No 10
>2re7_A Uncharacterized protein; general stress protein COG3871, structural genomics, joint C structural genomics, JCSG; 2.50A {Psychrobacter arcticus}
Probab=99.90 E-value=2.1e-23 Score=164.70 Aligned_cols=116 Identities=14% Similarity=0.211 Sum_probs=94.5
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEe--CCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLD--EDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVV 138 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d--~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~ 138 (241)
.++++++|||+++||.|++|+|.+...+ ++.|||+|+..|+|+++|++||+|+|+|+++. ..++|+|+|+|+
T Consensus 16 ~~~~~~~LaT~~~dG~P~~~pv~~~~~~~~~~~l~f~t~~~s~K~~~l~~np~v~l~~~~~~------~~~~v~v~G~a~ 89 (134)
T 2re7_A 16 KDVKFAMISTSNKKGDIHAWPMTTSEVNLDNKEIWFIGDKTSDVVKDIQDDARIGLTYATQD------EKNYVSISGDAE 89 (134)
T ss_dssp HHCSCEEEEEECTTSCEEEEEECCSEEETTTTEEEEEEETTSHHHHHHHHCCEEEEEEECTT------SSCEEEEEEEEE
T ss_pred hcCCEEEEEEEcCCCCEEEEecEeeeecCCCceEEEEECCCCHHHHHHhhCCcEEEEEEcCC------CCeEEEEEEEEE
Confidence 4577899999999999999999998776 45699999999999999999999999999988 789999999999
Q ss_pred EeCCcchHhhhccCCccceeeEeecCCCCcCChHHHHHHHHH-HHhhhccCCCCCCCCCceEEEEEEeeEEEEeecC
Q psy14695 139 QLETSNWIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDE-LLSKFEKGQHDLARPDHVIAYKLFPTFMDFYESH 214 (241)
Q Consensus 139 ~~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~-~~~~~~~~~~~~p~p~~w~~~~l~P~~iEfw~~~ 214 (241)
++++.+ .+++.+.. +..+|+++ +.+++|++|+|.|+++|||+++
T Consensus 90 ~~~d~~----------------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~w~~~ 134 (134)
T 2re7_A 90 LPTDKA----------------------------KLDELWSPVYSAFFANG----KEDANIQLIKVVPHGVECWLSG 134 (134)
T ss_dssp CCCCHH----------------------------HHHHHCCHHHHHTSTTG----GGCTTEEEEEEEEEEEEEECCC
T ss_pred EECCHH----------------------------HHHHHhhHHHHHHccCC----CCCCCEEEEEEEeCEEEEecCC
Confidence 987533 22222222 23345433 3467899999999999999963
No 11
>2iab_A Hypothetical protein; NP_828636.1, structural genomics, JOIN for structural genomics, JCSG; 2.00A {Streptomyces avermitilis}
Probab=99.89 E-value=5.7e-23 Score=167.89 Aligned_cols=131 Identities=16% Similarity=0.182 Sum_probs=103.1
Q ss_pred cccceEEEEeeCCC-CceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEEE
Q psy14695 61 LVANVMNVSTASKD-GRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVVQ 139 (241)
Q Consensus 61 ~~~~~~~LATv~~d-G~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~~ 139 (241)
.+.++++|||+++| |.|++|+|.+. +++++|||+|+..|+|+++|++||+|+|++.+. .++|+|+|+|++
T Consensus 22 ~~~~~~~LaT~~~d~G~P~~~pv~~~-~d~~~l~f~t~~~s~K~~~l~~np~Vsl~v~~~--------~~~v~v~G~a~~ 92 (155)
T 2iab_A 22 ELDVDAWVSTAGADGGAPYLVPLSYL-WDGETFLVATPAASPTGRNLSETGRVRLGIGPT--------RDLVLVEGTALP 92 (155)
T ss_dssp HHCCEEEEEEECTTSSCEEEEEEECE-ECSSCEEEEEETTSHHHHHHHHHCEEEEEESST--------TCEEEEEEEEEE
T ss_pred hCCCeEEEEEecCCCCCceEEEEEEE-EECCEEEEEECCCCHHHHHHhhCCcEEEEEEcC--------CCEEEEEEEEEE
Confidence 46788999999999 99999999997 677789999999999999999999999999764 368999999999
Q ss_pred eCCcchHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCCCCCCCceEEEEEEeeEEEEeecCCCCce
Q psy14695 140 LETSNWIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHDLARPDHVIAYKLFPTFMDFYESHGLKIA 219 (241)
Q Consensus 140 ~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~~p~p~~w~~~~l~P~~iEfw~~~~~r~h 219 (241)
+++.+ ++++.++.+..+|+... ..+. +.|++|+|.|++++||+. .+++|
T Consensus 93 v~d~~----------------------------~~~~~~~~~~~k~~~~~-~~~~-~~~~~~ri~p~~v~~w~~-~~~l~ 141 (155)
T 2iab_A 93 LEPAG----------------------------LPDGVGDTFAEKTGFDP-RRLT-TSYLYFRISPRRVQAWRE-ANELS 141 (155)
T ss_dssp ECGGG----------------------------CCTTHHHHHHHHHSCCG-GGCS-SCEEEEEEEEEEEEEESS-GGGST
T ss_pred ecCch----------------------------hHHHHHHHHHHHhCCCc-cccC-CCEEEEEEEEEEEEEecC-CCCcC
Confidence 98543 11122234444553110 1122 459999999999999995 88899
Q ss_pred eEEEEEEcCCCCCCceE
Q psy14695 220 DRLKYVRDNENAKDWEC 236 (241)
Q Consensus 220 ~R~~y~~~~~~~~~W~~ 236 (241)
+|++|. ++ .|..
T Consensus 142 ~r~~~~--~~---~w~~ 153 (155)
T 2iab_A 142 GRELMR--DG---EWLV 153 (155)
T ss_dssp TCEEEE--TT---EECC
T ss_pred cceEEE--CC---eeee
Confidence 999997 22 4864
No 12
>2hhz_A Pyridoxamine 5'-phosphate oxidase-related; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.00A {Streptococcus suis}
Probab=99.86 E-value=3e-21 Score=155.90 Aligned_cols=119 Identities=13% Similarity=0.203 Sum_probs=98.1
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCccc--ceeEEEEEEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYL--ARQIRIAGKVV 138 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~--~rQVri~G~a~ 138 (241)
.+.++++|||+++||.|++|+|.+...++++|||+|+.+|+|+++|++||+|+++|+++. . .++|+|+|+|+
T Consensus 12 ~~~~~~~LaTv~~dG~P~~~p~~~~~~~~~~l~f~t~~~s~k~~~l~~np~V~l~~~~~~------~~~~~~v~i~G~a~ 85 (150)
T 2hhz_A 12 EDMKVGVFATLDEYGNPHARHAHITAANEEGIFFMTSPETHFYDQLMGDQRVAMTAISEE------GYLIQVVRVEGTAR 85 (150)
T ss_dssp HHTCEEEEEEECTTCCEEEEEEEEEEEETTEEEEEECTTSHHHHHHHHCCEEEEEEEECS------TTCCEEEEEEEEEE
T ss_pred hcCCeEEEEEECCCCCEEEEEEEEEEEcCCEEEEEecCCCHHHHHHhhCCeEEEEEEcCC------cceeEEEEEEEEEE
Confidence 457789999999999999999999876777899999999999999999999999999876 3 38999999999
Q ss_pred EeCCcchHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCCCCCCCceEEEEEEeeEEEEeecCCC
Q psy14695 139 QLETSNWIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHDLARPDHVIAYKLFPTFMDFYESHGL 216 (241)
Q Consensus 139 ~~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~~p~p~~w~~~~l~P~~iEfw~~~~~ 216 (241)
++++.+..++|+.+|.. .++|++ +..+.+++|+|.|.+++||+...+
T Consensus 86 ~v~d~~~~~~~~~~p~~--------------------------~~~~~~-----~~~~~~~v~~i~~~~~~~~d~~~~ 132 (150)
T 2hhz_A 86 PVENDYLKTVFADNPYY--------------------------QHIYKD-----ESSDTMQVFQIYAGHGFYHSLTQG 132 (150)
T ss_dssp EECHHHHHHHHTTCGGG--------------------------GGGCC----------CCEEEEEEEEEEEEEEGGGT
T ss_pred ECCcHHHHHHHHhChhh--------------------------hhcccC-----CCCCcEEEEEEEccEEEEEECCCC
Confidence 99987777888755432 234422 234579999999999999998654
No 13
>3u35_A General stress protein; PNP-oxidase like fold, FMN/FAD, protein BI; HET: PGE; 2.50A {Xanthomonas axonopodis PV} PDB: 3u34_A*
Probab=99.86 E-value=4.2e-22 Score=167.99 Aligned_cols=125 Identities=10% Similarity=0.084 Sum_probs=101.6
Q ss_pred cccceEEEEeeCCCCceeEEEEEee-EEeCCe-EEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILR-RLDEDG-FVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVV 138 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr-~~d~~g-~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~ 138 (241)
.+.++++|||+++|| |++|+|++. +.+++| |||+|+..|+|+++|++||+|+|||+++. ..++|+|+|+|+
T Consensus 36 ~~~~~~~LaTv~~dg-p~~rpm~~~~d~d~~g~l~F~T~~~s~K~~~l~~np~v~l~~~~~~------~~~~V~v~G~a~ 108 (182)
T 3u35_A 36 KSDRTVMLGLDGVED-GHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKG------HDLFASISGSLR 108 (182)
T ss_dssp HHHCEEEECCTTSGG-GCCEEEECBCSSSSCSCEEEEEETTCGGGGGCTTCEEEEEEEECTT------SSEEEEEEEEEE
T ss_pred ccCCEEEEEEecCCC-CcEEEEEEEEeecCCCEEEEEECCCCHHHHHHHHCCcEEEEEECCC------CCeEEEEEEEEE
Confidence 467789999999886 899999986 334445 99999999999999999999999999998 789999999999
Q ss_pred EeCCcc-hHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCCCCCCCceEEEEEEeeEEEEeecCCCC
Q psy14695 139 QLETSN-WIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHDLARPDHVIAYKLFPTFMDFYESHGLK 217 (241)
Q Consensus 139 ~~~~~~-~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~~p~p~~w~~~~l~P~~iEfw~~~~~r 217 (241)
++++.+ .+++|. ..+..+|+++ |.+|++++|+|.|+++|||+++.+
T Consensus 109 vv~D~e~~~~lw~----------------------------~~~~~~~p~g----~~dP~~~vlrv~p~~~e~Wd~~~~- 155 (182)
T 3u35_A 109 EDTDPAMVDRLWN----------------------------PYVAAWYEGG----KTDPNLALLRLDADHAQIWLNESS- 155 (182)
T ss_dssp ECCCHHHHHHHCC----------------------------HHHHTTCTTG----GGCTTEEEEEEEEEEEEEEEEEEE-
T ss_pred EEcCHHHHHHHHH----------------------------HHHHHhccCC----CCCCCEEEEEEEeCEEEEEeCCCC-
Confidence 998654 355653 1234566654 356789999999999999998775
Q ss_pred ceeEEEEE
Q psy14695 218 IADRLKYV 225 (241)
Q Consensus 218 ~h~R~~y~ 225 (241)
+--|+.+.
T Consensus 156 ~~~~~~~~ 163 (182)
T 3u35_A 156 LLAGIKVL 163 (182)
T ss_dssp ECCCEEEE
T ss_pred ceeeeeee
Confidence 44566664
No 14
>2ig6_A NIMC/NIMA family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: FMN; 1.80A {Clostridium acetobutylicum}
Probab=99.86 E-value=1.8e-21 Score=158.57 Aligned_cols=116 Identities=14% Similarity=0.088 Sum_probs=98.8
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEEEe
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVVQL 140 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~~~ 140 (241)
.++++++|||++ +|.|++|+|.+...++++|||+|+.+|+|+++|++||+|+|+|+++. .++|+|+|+|+++
T Consensus 28 ~~~~~~~LaTv~-dG~P~~rpv~~~~~~~~~l~f~t~~~s~K~~~l~~np~V~l~~~~~~-------~~~v~i~G~a~~v 99 (150)
T 2ig6_A 28 KECGVFYLATNE-GDQPRVRPFGAVFEYEGKLYIVSNNTKKCFKQMIQNPKVEISGMNKK-------GQWIRLTGEVAND 99 (150)
T ss_dssp HHHCSEEEEEEE-TTEEEEEEECCCEEETTEEEEEEETTSHHHHHHHHCCEEEEEEECTT-------SCEEEEEEEEEEC
T ss_pred HhCCeEEEEEcc-CCceEEEEeEEEEEcCCEEEEEeCCCcHHHHHHHHCCCEEEEEEcCC-------CeEEEEEEEEEEE
Confidence 457789999999 99999999999876777899999999999999999999999999876 6899999999999
Q ss_pred CCcc-hHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCCCCCCCceEEEEEEeeEEEEeecCCC
Q psy14695 141 ETSN-WIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHDLARPDHVIAYKLFPTFMDFYESHGL 216 (241)
Q Consensus 141 ~~~~-~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~~p~p~~w~~~~l~P~~iEfw~~~~~ 216 (241)
++.+ .+++|..+|..+ ++| + +..+.+++|+|.|.+++||....+
T Consensus 100 ~d~e~~~~~~~~~p~~~--------------------------~~~--~----~~dp~~~l~~v~~~~a~~wd~~~~ 144 (150)
T 2ig6_A 100 DRREVKELALEAVPSLK--------------------------NMY--S----VDDGIFAVLYFTKGEGTICSFKGE 144 (150)
T ss_dssp CCHHHHHHHHHHSGGGG--------------------------GTC--C----TTSSCEEEEEEEEEEEEEECSSSC
T ss_pred CCHHHHHHHHHhChHHH--------------------------Hhh--c----CCCCcEEEEEEECCEEEEEeCCCC
Confidence 9865 578998776532 344 2 134679999999999999997543
No 15
>2i02_A General stress protein of COG3871; pyridoxamine 5'-phosphate like family protein, structural genomics, joint center for structural genomics; HET: MSE FMN P33; 1.80A {Nostoc punctiforme} SCOP: b.45.1.1
Probab=99.85 E-value=6.1e-21 Score=153.12 Aligned_cols=117 Identities=17% Similarity=0.254 Sum_probs=93.4
Q ss_pred cccceEEEEeeCCCCceeEEEEEe-eEEe-CCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLIL-RRLD-EDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVV 138 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~l-r~~d-~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~ 138 (241)
.+.++++|||+++||.|++|+|.+ ..++ ++.|||+|+..|+|+++|++||+|+|+|+++. ..++|+|+|+|+
T Consensus 20 ~~~~~~~LaT~~~dG~P~~~pv~~~~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~------~~~~v~v~G~a~ 93 (148)
T 2i02_A 20 KNIDYGMFTTVDDDGSLHSYPMSKSGDINSEATLWFFTYAGSHKVTEIEHHEQVNVSFSSPE------QQRYVSISGTSQ 93 (148)
T ss_dssp TTCCEEEEEEECTTSCEEEEEEECBCC---CCEEEEEEETTSHHHHHHHHCCEEEEEEEETT------TTEEEEEEEEEE
T ss_pred hcCCEEEEEEEcCCCCEEEEEeEeeEEEcCCCeEEEEEcCCCHHHHHHHhCCcEEEEEEcCC------CCeEEEEEEEEE
Confidence 568899999999999999999999 7666 44599999999999999999999999999988 789999999999
Q ss_pred EeCCcch-HhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCCCCCCCceEEEEEEeeEEEEeecCC
Q psy14695 139 QLETSNW-IDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHDLARPDHVIAYKLFPTFMDFYESHG 215 (241)
Q Consensus 139 ~~~~~~~-~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~~p~p~~w~~~~l~P~~iEfw~~~~ 215 (241)
++.+.+. +++|... +..+|+++ +..+.|++|+|.|++++||++..
T Consensus 94 ~v~d~~~~~~~~~~~----------------------------~~~~~~~~----~~~~~~~v~~i~~~~~~~~~~~~ 139 (148)
T 2i02_A 94 LVKDRNKMRELWKPE----------------------------LQTWFPKG----LDEPDIALLKVNINQVNYWDSTS 139 (148)
T ss_dssp EECCHHHHHHHCCGG----------------------------GGGTCTTG----GGCTTEEEEEEEEEEEEEEEGGG
T ss_pred EEcCHHHHHHHHhHH----------------------------HHHHccCC----CCCCCEEEEEEEeCEEEEEcCCC
Confidence 9986543 4555311 12223322 12356999999999999999753
No 16
>2hq7_A Protein, related to general stress protein 26(GS2 B.subtilis; NP_350077.1, structural genomics, joint center for structural genomics; 2.00A {Clostridium acetobutylicum} SCOP: b.45.1.1
Probab=99.82 E-value=5.5e-20 Score=146.62 Aligned_cols=116 Identities=15% Similarity=0.187 Sum_probs=93.9
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeC-CeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDE-DGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVVQ 139 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~-~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~~ 139 (241)
.+.++++|||++++|.|++|+|.+...++ +.|||+|+..|+|+++|++||+|+++|+++. ..++|+|+|+|++
T Consensus 16 ~~~~~~~LaT~~~~G~P~~~pv~~~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~------~~~~v~v~G~a~~ 89 (146)
T 2hq7_A 16 ESSKIVMVGTNGENGYPNIKAMMRLKHDGLKKFWLSTNTSTRMVERLKKNNKICLYFVDDN------KFAGLMLVGTIEI 89 (146)
T ss_dssp HHCSEEEEEEECGGGCEEEEEEEEEEEETTTEEEEEEECCHHHHHHHHHCCEEEEEEECSS------SSEEEEEEEEEEE
T ss_pred hcCCEEEEEEECCCCCEEEEEEEEEEEcCCCEEEEEecCCCHHHHHHhhCCeEEEEEECCC------CceEEEEEEEEEE
Confidence 45678999999999999999999987664 4699999999999999999999999999987 7899999999999
Q ss_pred eCCcc-hHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHH-hhhccCCCCCCCCCceEEEEEEeeEEEEeecCC
Q psy14695 140 LETSN-WIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELL-SKFEKGQHDLARPDHVIAYKLFPTFMDFYESHG 215 (241)
Q Consensus 140 ~~~~~-~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~-~~~~~~~~~~p~p~~w~~~~l~P~~iEfw~~~~ 215 (241)
+.+.+ ..+.|. .+. ..++++ +.++.|++|+|.|++++||++..
T Consensus 90 v~d~~~~~~~~~-----------------------------~~~~~~~~~~----~~~~~~~~~~i~p~~~~~w~~~~ 134 (146)
T 2hq7_A 90 LHDRASKEMLWT-----------------------------DGCEIYYPLG----IDDPDYTALCFTAEWGNYYRHLK 134 (146)
T ss_dssp ECCHHHHHHHCC-----------------------------TTHHHHCTTG----GGCTTEEEEEEEEEEEEEEETTE
T ss_pred EcCHHHHHHHHH-----------------------------HHHHHHCCCC----CCCCCEEEEEEEccEEEEEeCCC
Confidence 98653 234443 212 222222 23468999999999999999754
No 17
>3ec6_A General stress protein 26; alpha-beta structure, structural genomics of niaid; HET: FAD; 1.60A {Bacillus anthracis} SCOP: b.45.1.0
Probab=99.81 E-value=2.1e-19 Score=143.25 Aligned_cols=117 Identities=16% Similarity=0.167 Sum_probs=90.4
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEEEe
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVVQL 140 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~~~ 140 (241)
.+.++++|||++ ||.|++|+|.+.. +++.|||+|+..|+|+++|++||+|+|++.+.. |. ...++|+|+|+|+++
T Consensus 13 ~~~~~~~LaT~~-dg~P~~~pv~~~~-~~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~--d~-~~~~~v~v~G~a~~~ 87 (139)
T 3ec6_A 13 QGQRTGVLSTVR-NDKPHSAFMMFFH-EDFVLYVATDRQSKKITDIENNPNVHVLLGREG--KK-LDEDYIEVEGLASIE 87 (139)
T ss_dssp HSCCEEEEEEEE-TTEEEEEEEECEE-ETTEEEEEEETTCHHHHHHHHCCEEEEEECC-----C-TTCCEEEEEEEEEEE
T ss_pred hcCCEEEEEEec-CCCEEEEEEEEEE-eCCEEEEEECCCCHHHHHHHhCCcEEEEEEecC--CC-CCccEEEEEEEEEEE
Confidence 467889999999 9999999999986 777899999999999999999999999984321 00 157899999999999
Q ss_pred CCcc-hHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCCCCCCCceEEEEEEeeEEEEeecCC
Q psy14695 141 ETSN-WIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHDLARPDHVIAYKLFPTFMDFYESHG 215 (241)
Q Consensus 141 ~~~~-~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~~p~p~~w~~~~l~P~~iEfw~~~~ 215 (241)
.+.+ .+++|.. .++.+| ++ +..+.+++++|.|++++||.+..
T Consensus 88 ~d~~~~~~~~~~----------------------------~~~~~~-~~----~~~~~~~~i~i~p~~~~~~d~~g 130 (139)
T 3ec6_A 88 EDSTLKNKFWNN----------------------------SLKRWL-LR----PEDPNYVLIKINPDTIYYIDGAG 130 (139)
T ss_dssp CCHHHHHHHCCG----------------------------GGGGTC-SS----TTCTTEEEEEEEEEEEEEEC---
T ss_pred cCHHHHHHHHHH----------------------------HHHHHh-CC----CCCCCEEEEEEEeeEEEEEcCCC
Confidence 8644 4666641 123344 23 23467999999999999999754
No 18
>3db0_A LIN2891 protein; putative pyridoxamine 5'-phosphate oxidase, STR genomics, joint center for structural genomics, JCSG; 2.00A {Listeria innocua}
Probab=99.79 E-value=1.4e-18 Score=136.01 Aligned_cols=111 Identities=12% Similarity=0.171 Sum_probs=82.1
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEe-cCCcCCcccceeEEEEEEEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLW-INNVDGLYLARQIRIAGKVVQ 139 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~-~~~~~~~~~~rQVri~G~a~~ 139 (241)
.+.++++|||++ +|.|++|+|.+.. +++.|||+|+..|+|+++|++||+|+|++.+ +. ..++|+|.|+|++
T Consensus 15 ~~~~~~~LaT~~-~g~P~~~pv~~~~-~~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~~------~~~~v~v~G~a~~ 86 (128)
T 3db0_A 15 EQHQVGVLTSVQ-GDFPHARYMTFLH-DGLTLYTPSGKELPKTEEVRRNPHVCVLIGYDSP------GSAFLEINGLASL 86 (128)
T ss_dssp HTCCEEEEEEEE-TTEEEEEEEECEE-ETTEEEEEC----CTTCCCCCCCEEEEEECCCST------TCCEEEEEEEEEE
T ss_pred hhCCEEEEEEec-CCCEEEEEEEEEe-cCCEEEEEECCCCHHHHHHHhCCceEEEEEEcCC------CCcEEEEEEEEEE
Confidence 567889999997 8999999999985 7778999999999999999999999999865 44 6789999999999
Q ss_pred eCCcc-hHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCCCCCCCceEEEEEEeeEEEEee
Q psy14695 140 LETSN-WIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHDLARPDHVIAYKLFPTFMDFYE 212 (241)
Q Consensus 140 ~~~~~-~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~~p~p~~w~~~~l~P~~iEfw~ 212 (241)
+.+.+ .+++| ..+..+|..+ +..+.+++++|.|++++||.
T Consensus 87 v~d~~~~~~~~-----------------------------~~~~~~~~~~----~~~~~~~~~ri~p~~~~~~~ 127 (128)
T 3db0_A 87 EEDESIKERIW-----------------------------ENISKDWFQG----EDSPSFVVIKIVPEQIRILN 127 (128)
T ss_dssp CCCHHHHHHHH-----------------------------HHHCSSCCC----------CCEEEEEEEEEEEEC
T ss_pred EcCHHHHHHHH-----------------------------HHHHHHhCCC----CCCCCEEEEEEEeEEEEEec
Confidence 97432 33444 3322223222 23367999999999999996
No 19
>2fhq_A Putative general stress protein; alpha-beta structure, structural genomics, PSI, protein STRU initiative; HET: MSE; 1.87A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=99.75 E-value=1.5e-17 Score=131.66 Aligned_cols=113 Identities=14% Similarity=0.239 Sum_probs=90.9
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeC-CeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDE-DGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVVQ 139 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~-~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~~ 139 (241)
...++++|||++++|.|++++|.+...++ +.|||+|+..|+|+++|++||+|+++|.++. ++|+|.|+|+.
T Consensus 18 ~~~~~~~LaT~~~~G~P~~~pv~~~~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~--------~~v~v~G~a~~ 89 (141)
T 2fhq_A 18 QKCEVVTLASVNKEGYPRPVPMSKIAAEGISTIWMSTGADSLKTIDFLSNPKAGLCFQEKG--------DSVALMGEVEV 89 (141)
T ss_dssp HTCSEEEEEEECTTSCEEEEEEECCEEETTTEEEEEEETTSHHHHHHHHCCEEEEEEEETT--------EEEEEEEEEEE
T ss_pred hcCCEEEEEEECCCCCEEEEeeEEEEeCCCCeEEEEeCCCCHHHHHHHhCCcEEEEEEeCC--------CEEEEEEEEEE
Confidence 45678999999999999999999976665 5799999999999999999999999998765 58999999999
Q ss_pred eCCcc-hHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCCCCCCCceEEEEEEeeEEEEeec
Q psy14695 140 LETSN-WIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHDLARPDHVIAYKLFPTFMDFYES 213 (241)
Q Consensus 140 ~~~~~-~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~~p~p~~w~~~~l~P~~iEfw~~ 213 (241)
+++.+ .++.|... +..+|+++ +..+.+++|+|+|++++||++
T Consensus 90 v~d~~~~~~~~~~~----------------------------~~~~~p~~----~~~~~~~~~~i~p~~~~~~~~ 132 (141)
T 2fhq_A 90 VTDEKLKQELWQDW----------------------------FIEHFPGG----PTDPGYVLLKFTANHATYWIE 132 (141)
T ss_dssp ECCHHHHHHSCCGG----------------------------GGGTCTTC----TTCTTEEEEEEEEEEEEEEET
T ss_pred ECCHHHHHHHHHHH----------------------------HHHHcCCC----CCCCCEEEEEEEcCEEEEeeC
Confidence 98643 34555411 12233332 123579999999999999997
No 20
>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1
Probab=99.74 E-value=6.8e-18 Score=137.53 Aligned_cols=125 Identities=16% Similarity=0.150 Sum_probs=89.6
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcc-cceeEEEEEEEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLY-LARQIRIAGKVVQ 139 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~-~~rQVri~G~a~~ 139 (241)
.+.++++|||+++||.|++++|.+...+++++||+|+..|+|+++|++||+|+|+|.++......+ ..++|+|+|+|++
T Consensus 28 ~~~~~~~LaTv~~dG~P~~~~v~~~~~~~g~~~f~t~~~s~k~~nl~~np~vsl~v~~~~~~~~~~~~~~~v~i~G~a~~ 107 (157)
T 1vl7_A 28 QEFQSAIISTISEQGIPNGSYAPFVIDDAKNIYIYVSGLAVHTKNIEANPLVNVLFVDDEAKTNQIFARRRLSFDCTATL 107 (157)
T ss_dssp TTCSEEEEEEECTTSCEEEEEEEEEECTTCCEEEEECTTSHHHHHHHHCCEEEEEEECCGGGCSSGGGCCEEEEEEEEEE
T ss_pred HhCCEEEEEEECCCCCEEEEEEEEEEcCCCCEEEEEeCccHHHHHHHhCCcEEEEEEcCccccCCcccCceEEEEEEEEE
Confidence 578899999999999999999998754446799999999999999999999999999875211111 2578999999999
Q ss_pred eCCcchHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccC-CCCCCCCCceEEEEEEeeEEEEeec
Q psy14695 140 LETSNWIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKG-QHDLARPDHVIAYKLFPTFMDFYES 213 (241)
Q Consensus 140 ~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~-~~~~p~p~~w~~~~l~P~~iEfw~~ 213 (241)
+++++. .| +...+.+.++|++. . .....+.+.+|+|.|+++.||.|
T Consensus 108 v~~~~~--~~-------------------------~~~~~~~~~~~p~~~~-~~~~~~~~~l~~l~~~~~~~~~G 154 (157)
T 1vl7_A 108 IERESQ--KW-------------------------NQVVDQFQERFGQIIE-VLRGLADFRIFQLTPKEGRFVIG 154 (157)
T ss_dssp ECTTSH--HH-------------------------HHHHHHHHHHHTHHHH-HHHHHSCCEEEEEEEEEEEEECS
T ss_pred cCCCcH--HH-------------------------HHHHHHHHHHCchHHH-HhhccCCEEEEEEEEeEEEEEcC
Confidence 986521 01 00111122222210 0 00112468999999999999975
No 21
>2asf_A Hypothetical protein RV2074; H37RV, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: CIT; 1.60A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.70 E-value=4.3e-16 Score=123.67 Aligned_cols=114 Identities=11% Similarity=0.031 Sum_probs=91.1
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeC--CeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDE--DGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVV 138 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~--~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~ 138 (241)
.+.++++|||+++||.|++++|.+. +++ +.|||+|+..|+|+++|++||+|+|+++++ .+.++|.|+|+
T Consensus 19 ~~~~~~~LaT~~~dG~P~~~pv~~~-~~~~~~~l~f~t~~~s~k~~~l~~np~V~l~~~~~--------~~~v~v~G~a~ 89 (137)
T 2asf_A 19 SERHLAMLTTLRADNSPHVVAVGFT-FDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDG--------ARWLSLEGRAA 89 (137)
T ss_dssp TSSCCEEEEEECTTSCEEEEEECCE-EETTTTEEEEEEETTCHHHHHHHHHCEEEEEEEET--------TEEEEEEEEEE
T ss_pred hCCCeEEEEEECCCCCEEEEEEEEE-EECCCCEEEEEeCCCCHHHHHHhhCCeEEEEEECC--------CCEEEEEEEEE
Confidence 5688899999999999999999996 554 469999999999999999999999998753 37899999999
Q ss_pred EeCCcchHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCCCCCCCceEEEEEEeeEEEEeecCC
Q psy14695 139 QLETSNWIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHDLARPDHVIAYKLFPTFMDFYESHG 215 (241)
Q Consensus 139 ~~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~~p~p~~w~~~~l~P~~iEfw~~~~ 215 (241)
++.+ .++..+.+..+..+|+.+ .+ .+..++|+|.|+++..|..-.
T Consensus 90 ~~~d----------------------------~~~~~~~~~~~~~~~~~~---~~-~~~~~viri~~~~v~g~~~~~ 134 (137)
T 2asf_A 90 VNSD----------------------------IDAVRDAELRYAQRYRTP---RP-NPRRVVIEVQIERVLGSADLL 134 (137)
T ss_dssp EECC----------------------------HHHHHHHHHHHHHHSCCC---CC-CTTEEEEEEEEEEEEECTTTC
T ss_pred EecC----------------------------HHHHHHHHHHHHHhcCcc---cC-CCCEEEEEEEEEEEEEecccc
Confidence 9983 333344445556667432 22 356899999999999887543
No 22
>3f7e_A Pyridoxamine 5'-phosphate oxidase-related, FMN- binding; F420 dependent reductase, unknown function; HET: MSE; 1.23A {Mycobacterium smegmatis}
Probab=99.69 E-value=3.1e-16 Score=123.46 Aligned_cols=117 Identities=15% Similarity=0.131 Sum_probs=89.1
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEEEe
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVVQL 140 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~~~ 140 (241)
.+.++++|||+++||.|++++|.+. ++++.|||+|+..|+|+++|++||+|+|++.++.. ..++|+|+|+|+.+
T Consensus 13 ~~~~~~~LaT~~~dG~P~~~pv~~~-~d~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~~-----~~~~v~v~G~a~~v 86 (131)
T 3f7e_A 13 ERPLYGHLATVRPDGTPQVNAMWFA-WDGEVLRFTHTTKRQKYRNIKANPAVAMSVIDPDN-----PYRYLEVRGLVEDI 86 (131)
T ss_dssp HSCCCEEEEEECTTSCEEEEEECCE-ECSSCEEEEEETTSHHHHHHHHCCEEEEEEECSSC-----TTCEEEEEEEEEEE
T ss_pred hCCCcEEEEEECCCCCEEEEEEEEE-EECCEEEEEECCCCHHHHHHhhCCcEEEEEEcCCC-----CeeEEEEEEEEEEe
Confidence 4577899999999999999999986 67778999999999999999999999999998761 26899999999988
Q ss_pred CCcchHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCC-CCCCCceEEEEEEeeEEEEee
Q psy14695 141 ETSNWIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHD-LARPDHVIAYKLFPTFMDFYE 212 (241)
Q Consensus 141 ~~~~~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~-~p~p~~w~~~~l~P~~iEfw~ 212 (241)
++++..+ .++.+.++|.....+ ....+..++|+|.|+++..|.
T Consensus 87 ~~~~~~~-----------------------------~~~~l~~ky~~~~~~~~~~~~~~~v~ri~~~~~~gk~ 130 (131)
T 3f7e_A 87 VPDPTGA-----------------------------FYLKLNDRYDGPLTEPPADKADRVIIVVRPTAFSKQV 130 (131)
T ss_dssp EECTTCH-----------------------------HHHHHHHHTTCSCCSCCTTGGGEEEEEEEEEEEECC-
T ss_pred ccCccHH-----------------------------HHHHHHHHhCCcccCCCCCCCCEEEEEEEeEEEEeec
Confidence 7542111 123445555432101 112256899999999998774
No 23
>1rfe_A Hypothetical protein RV2991; structural genomics, TB, FMN BIN PSI, protein structure initiative, TB structural genomics consortium; 2.00A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.63 E-value=6.2e-15 Score=119.28 Aligned_cols=121 Identities=11% Similarity=0.154 Sum_probs=88.3
Q ss_pred ccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEEEeC
Q psy14695 62 VANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVVQLE 141 (241)
Q Consensus 62 ~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~~~~ 141 (241)
+..+++|||++++|.|++++|.+. ++++.|||+|+..|+|+++|++||+|+++|..+.. ....+.|+|.|+|++++
T Consensus 21 ~~~~~~LaT~~~~G~P~~~pv~~~-~~~~~l~~~t~~~~~k~~~l~~np~v~l~~~~~~~---~~~~~~v~~~G~a~~v~ 96 (162)
T 1rfe_A 21 SSRTGTLATIGPDGQPHLTAMWYA-VIDGEIWLETKAKSQKAVNLRRDPRVSFLLEDGDT---YDTLRGVSFEGVAEIVE 96 (162)
T ss_dssp HCCCEEEEEECTTSCEEEEEECCE-EETTEEEEEEETTSHHHHHHHHCCEEEEEEEECSS---GGGCEEEEEEEEEEEEC
T ss_pred cCcEEEEEEECCCCCEEEEEEEEE-EECCEEEEEecCccHHHHHHhhCCeEEEEEEcCCC---cccccEEEEEEEEEEeC
Confidence 456799999999999999999986 56678999999999999999999999999986551 00247899999999998
Q ss_pred Ccc-hHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCC------CCCCCceEEEEEEeeEEEEeecC
Q psy14695 142 TSN-WIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHD------LARPDHVIAYKLFPTFMDFYESH 214 (241)
Q Consensus 142 ~~~-~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~------~p~p~~w~~~~l~P~~iEfw~~~ 214 (241)
+++ ..+.|. .+.++|..+..+ -...+..++|+|.|+++++|...
T Consensus 97 d~~~~~~~~~-----------------------------~l~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~ 147 (162)
T 1rfe_A 97 EPEALHRVGV-----------------------------SVWERYTGPYTDECKPMVDQMMNKRVGVRIVARRTRSWDHR 147 (162)
T ss_dssp CHHHHHHHHH-----------------------------HHHHHHTCCCCGGGHHHHHHHTTTEEEEEEEEEEEEEEEGG
T ss_pred ChHHHHHHHH-----------------------------HHHHHhcCcccchhHHHHHhccCceEEEEEEEEEEEEeccc
Confidence 643 233332 222222110000 00124789999999999999864
Q ss_pred C
Q psy14695 215 G 215 (241)
Q Consensus 215 ~ 215 (241)
.
T Consensus 148 ~ 148 (162)
T 1rfe_A 148 K 148 (162)
T ss_dssp G
T ss_pred c
Confidence 3
No 24
>3ba3_A Protein LP_0091, pyridoxamine 5'-phosphate oxidase-like protein; NP_783940.1, structural genomics; HET: MSE; 1.55A {Lactobacillus plantarum WCFS1}
Probab=99.61 E-value=2.3e-15 Score=122.70 Aligned_cols=115 Identities=15% Similarity=0.103 Sum_probs=91.1
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEe--CCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCccc---ceeEEEE-
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLD--EDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYL---ARQIRIA- 134 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d--~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~---~rQVri~- 134 (241)
.+.+.+.|||++ +|.|++|+|.+..++ ++.|||.|+.+|+|++||++||+|++|.+.++ . ..+||++
T Consensus 12 ~~~~~~~LAT~~-~g~P~vR~v~f~~~~~~~~~LYF~T~~~k~k~~ql~~Np~V~i~~~~~d------~~~~~~~IRi~~ 84 (145)
T 3ba3_A 12 QSTNKIALSTAV-NNEADVKIVNFVWYEAQPDTLYFSSVKTSPALKVYDQNPDIAFITIPND------GTAGNPYLRAQH 84 (145)
T ss_dssp HTEEEEEEEEEE-TTEEEEEEEECEECTTSTTEEEEEEETTCTHHHHHTTCCEEEEEEEECT------TCTTCCEEEEEE
T ss_pred HhCCcEEEEECC-CCCEEEEEEEEEEEecCCCEEEEEECCCCHHHHHHHhCCCEEEEEECCC------CCccceEEEEEe
Confidence 457789999965 899999999998444 56799999999999999999999999988766 3 5899999
Q ss_pred EEEEEeCC---cchHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCCCCCCCceEEEEEEeeEEEEe
Q psy14695 135 GKVVQLET---SNWIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHDLARPDHVIAYKLFPTFMDFY 211 (241)
Q Consensus 135 G~a~~~~~---~~~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~~p~p~~w~~~~l~P~~iEfw 211 (241)
|+|++.++ +..+.+|+..|. ++..|+.. . +.+.+|.|.|.++.+.
T Consensus 85 G~a~~~~~~~~~~k~~~~e~~P~--------------------------~k~~y~~~-----~-~~l~vf~i~~~~a~~~ 132 (145)
T 3ba3_A 85 VKLQRSTKTMTDLLPQYLETVPN--------------------------YQQVWDAI-----G-STLVVFELKLTDLFVD 132 (145)
T ss_dssp EEEEECSCCHHHHHHHHHHHSTT--------------------------HHHHHHHH-----G-GGEEEEEEECSEEEEE
T ss_pred EEEEEcCCchHHHHHHHHHhChh--------------------------hhhcccCC-----C-CcEEEEEEECCEEEEE
Confidence 99999874 223566765553 33444321 2 3799999999999998
Q ss_pred ecC
Q psy14695 212 ESH 214 (241)
Q Consensus 212 ~~~ 214 (241)
...
T Consensus 133 ~~~ 135 (145)
T 3ba3_A 133 AGV 135 (145)
T ss_dssp CCT
T ss_pred CCC
Confidence 844
No 25
>2aq6_A Pyridoxine 5'-phosphate oxidase; pyridoxal 5'-phosphate, STR genomics, PSI, protein structure initiative, TB structural consortium; HET: PLP; 1.70A {Mycobacterium tuberculosis} SCOP: b.45.1.1 PDB: 1xxo_A 1y30_A* 1w9a_A*
Probab=99.60 E-value=7.8e-15 Score=116.68 Aligned_cols=76 Identities=13% Similarity=0.105 Sum_probs=67.6
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeCC--eEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDED--GFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVV 138 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~~--g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~ 138 (241)
....+++|||++.||.|++++|.+. ++++ .+||+|+..|+|+++|++||+|+++|..+. ..++|+|+|+|+
T Consensus 15 ~~~~~~~LaT~~~~G~P~~~pv~~~-~~~~~~~l~~~t~~~~~k~~~l~~np~v~l~~~~~~------~~~~v~v~G~a~ 87 (147)
T 2aq6_A 15 SGNSIGVLATIKHDGRPQLSNVQYH-FDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADD------GWSYAVAEGTAQ 87 (147)
T ss_dssp HTCSEEEEEEECTTSCEEEEEEECE-EETTTTEEEEEEETTSHHHHHHHHCCEEEEEEECTT------SSCEEEEEEECE
T ss_pred hcCCeEEEEEECCCCCEEEEEEEEE-EcCCCCEEEEEecCCCHHHHHHhhCCcEEEEEEcCC------CcEEEEEEEEEE
Confidence 4577899999999999999999996 5655 689999999999999999999999998766 567899999999
Q ss_pred EeCCc
Q psy14695 139 QLETS 143 (241)
Q Consensus 139 ~~~~~ 143 (241)
.+.+.
T Consensus 88 ~~~d~ 92 (147)
T 2aq6_A 88 LTPPA 92 (147)
T ss_dssp ECCCC
T ss_pred EcCCC
Confidence 99864
No 26
>3tgv_A Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}
Probab=99.50 E-value=1.2e-13 Score=112.01 Aligned_cols=82 Identities=11% Similarity=0.236 Sum_probs=68.8
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcc-cceeEEEEEEEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLY-LARQIRIAGKVVQ 139 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~-~~rQVri~G~a~~ 139 (241)
.+.+.++|||+++||.|++.+|.+. ++++++||+|+..|+|.++|++||+|||++..++...+.. ...-+.+.|+|+.
T Consensus 12 ~~~~~~~LaT~~~~G~P~~s~v~~~-~~~~~~~~~~s~~~~~~~nl~~~prvsl~v~~~~~~~~~~~~~~rltl~G~a~~ 90 (148)
T 3tgv_A 12 QERKTLQLATVDAQGRPNVSYAPFV-QNQEGYFVLISHIARHARNLEVNPQVSIMMIEDETEAKQLFARKRLTFDAVASM 90 (148)
T ss_dssp HHCCEEEEEEECTTCCEEEEEEEEE-EETTEEEEEEETTSHHHHHHHHSCEEEEEEECCGGGCSCGGGCCEEEEEEEEEE
T ss_pred hhCCEEEEEEECCCCCEEEEEEEEE-EECCEEEEEECCccHHHHHHHhCCCeEEEEecCcccccCcccceEEEEeeeEEE
Confidence 4578899999999999999999985 5778999999999999999999999999998766332322 2356999999999
Q ss_pred eCCc
Q psy14695 140 LETS 143 (241)
Q Consensus 140 ~~~~ 143 (241)
+.+.
T Consensus 91 v~~~ 94 (148)
T 3tgv_A 91 VERD 94 (148)
T ss_dssp ECTT
T ss_pred cCCC
Confidence 9854
No 27
>2htd_A Predicted flavin-nucleotide-binding protein from family structurally related to pyridoxine...; putative pyridoxamine 5'-phosphate oxidase; HET: MSE; 1.60A {Lactobacillus delbrueckii subsp}
Probab=99.49 E-value=1e-13 Score=111.18 Aligned_cols=74 Identities=14% Similarity=0.161 Sum_probs=67.0
Q ss_pred ceEEEEeeCCCCceeEEEEEeeE-EeCCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEEEeCC
Q psy14695 64 NVMNVSTASKDGRVNSRSLILRR-LDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVVQLET 142 (241)
Q Consensus 64 ~~~~LATv~~dG~P~~R~V~lr~-~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~~~~~ 142 (241)
..++|||+++||.|+++++.+.. .+++.|+|+|...++|+++|++||+|+|+|+++. ..++++|+|+|+.+.+
T Consensus 39 ~~~~LATv~~dG~P~~~p~~f~~~~d~~~l~f~~~~~~~k~~nL~~np~V~l~~~~~~------~~~~v~i~G~a~~v~d 112 (140)
T 2htd_A 39 NLVYLATVDADGNPQVGPKGSMTVLDPSHLQYLEKTKGEAYENIKRGSKVALVAADVP------SHTAVRVLATAEVHED 112 (140)
T ss_dssp SCEEEEEECTTCCEEEEEETTCEEEETTEEEEEESSCCHHHHHHHTTCCEEEEEEETT------TTEEEEEEEEEEEESS
T ss_pred CCEEEEEECCCCCEEEecceeEEecCCCEEEEeccCCchHHHHhhcCCeEEEEEEecC------CCCEEEEEEEEEEecC
Confidence 46899999999999999998754 4667899999999999999999999999999998 7899999999999985
Q ss_pred c
Q psy14695 143 S 143 (241)
Q Consensus 143 ~ 143 (241)
.
T Consensus 113 ~ 113 (140)
T 2htd_A 113 D 113 (140)
T ss_dssp S
T ss_pred h
Confidence 4
No 28
>2arz_A Hypothetical protein PA4388; hypothetical protein,structural genomics,MCSG, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa} SCOP: b.45.1.1
Probab=99.41 E-value=2.9e-12 Score=111.26 Aligned_cols=123 Identities=18% Similarity=0.192 Sum_probs=90.6
Q ss_pred cccceEEEEeeCC--CCceeEEEEEeeEEeCCe-EEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEE
Q psy14695 61 LVANVMNVSTASK--DGRVNSRSLILRRLDEDG-FVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKV 137 (241)
Q Consensus 61 ~~~~~~~LATv~~--dG~P~~R~V~lr~~d~~g-~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a 137 (241)
...+.++|||+++ ||.|++.+|.+. ++.+| +||+|...|+|+++|++||+|+|++..+...+.. ....|+|.|+|
T Consensus 17 ~~~~~~~LaT~~~~~dG~P~~s~v~~~-~d~~g~~~f~~s~~s~k~~nl~~nprvsl~v~~~~~~~~~-~~~~v~l~G~a 94 (247)
T 2arz_A 17 LKEYRAVLSTHSKKWPGFPFGSVVPYC-LDAEGRPLILISRIAQHTHNLQADPRCSMLVGERGAEDIQ-AVGRLTLLAEA 94 (247)
T ss_dssp HHCSEEEEEEECSSSTTCEEEEEEECE-ECTTSCEEEEEETTSHHHHHHHHCCEEEEEEECTTCSSTT-SSCEEEEEEEE
T ss_pred HhCCEEEEEEcCCCCCCcceEEEEEEE-ECCCCCEEEEEeChhHHHHHHHhCCCeEEEEecCCCCChh-hCceEEEEEEE
Confidence 4567899999999 999999999775 56555 9999999999999999999999999765411111 24579999999
Q ss_pred EEeCCcchHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCCCCCCCceEEEEEEeeEEEEeecCC
Q psy14695 138 VQLETSNWIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHDLARPDHVIAYKLFPTFMDFYESHG 215 (241)
Q Consensus 138 ~~~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~~p~p~~w~~~~l~P~~iEfw~~~~ 215 (241)
+.+.+++ .+.+ .+.+..+|++.+ ..+..+.+.+|+|.|+++.||.+-.
T Consensus 95 ~~v~d~e-~~~~----------------------------~~~~~~~~P~~~-~~~~~~~~~l~rl~~~~~~~~~gfG 142 (247)
T 2arz_A 95 RQLAEEE-VAAA----------------------------AERYYRYFPESA-DYHRVHDFDFWVLQPVQWRFIGGFG 142 (247)
T ss_dssp EECCHHH-HHHH----------------------------HHHHHHHCGGGT-TCBTTBBEEEEEEEEEEEEEECTTC
T ss_pred EECCcHH-HHHH----------------------------HHHHHHHCcChh-hcccccCcEEEEEEEEEEEEEcCCC
Confidence 9998432 1111 123445555432 2223457999999999999998643
No 29
>2q9k_A Uncharacterized protein; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.59A {Exiguobacterium sibiricum}
Probab=99.39 E-value=8.4e-13 Score=107.69 Aligned_cols=76 Identities=12% Similarity=0.056 Sum_probs=66.3
Q ss_pred cccceEEEEeeCCC-CceeEEEEEee-EEeCCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEE
Q psy14695 61 LVANVMNVSTASKD-GRVNSRSLILR-RLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVV 138 (241)
Q Consensus 61 ~~~~~~~LATv~~d-G~P~~R~V~lr-~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~ 138 (241)
.+.++++|||+++| |.|+++++... ..|++.+||+|+..++|+++|++||+|+|+|..+. ..++|+|+|+
T Consensus 19 ~~~~~~~LATv~~d~G~P~~sp~~~~~~~d~~~l~f~~~~~~~k~~nl~~np~Vsl~v~~~~--------~~~~i~G~A~ 90 (151)
T 2q9k_A 19 TDLPLVFLITHDQSKSWPITHAISWVYAKDETTIRFAIEADSLLVKTLADHPVFTLIFFADQ--------STYSLTCTDV 90 (151)
T ss_dssp SSCCCEEEEECCTTSSSCEEEEECCEEEEETTEEEEEEETTCTHHHHHHHSCCEEEEEEETT--------EEEEEEEEEE
T ss_pred hcCCEEEEEEEcCCCCcEeEeeeEEEEEeCCCEEEEEECCCcHHHHHHHhCCcEEEEEECCC--------CEEEEEEEEE
Confidence 45688999999999 99999999444 67778899999999999999999999999998655 3689999999
Q ss_pred EeCCcc
Q psy14695 139 QLETSN 144 (241)
Q Consensus 139 ~~~~~~ 144 (241)
++.+..
T Consensus 91 ~v~d~~ 96 (151)
T 2q9k_A 91 AAWETT 96 (151)
T ss_dssp EEECCS
T ss_pred EEeCcc
Confidence 998643
No 30
>2fg9_A 5-nitroimidazole antibiotic resistance protein; STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: FAD; 2.20A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=99.38 E-value=7e-12 Score=104.17 Aligned_cols=121 Identities=16% Similarity=0.167 Sum_probs=86.4
Q ss_pred ccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEecCCc-------CCc--ccceeEE
Q psy14695 62 VANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNV-------DGL--YLARQIR 132 (241)
Q Consensus 62 ~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~-------~~~--~~~rQVr 132 (241)
...+++|||+++||.|++++|.+. ++++.|||+|...++|+++|++||+|+++|..+... ... ...+.|.
T Consensus 37 ~~~~~~Lat~~~dg~P~v~Pv~f~-~~~~~lyfhta~~~~k~~~l~~np~V~~~v~~~~~~is~~~~~~~~~t~~y~sV~ 115 (178)
T 2fg9_A 37 QADACFVGITDLEGNPYVVPMNFG-YENDTLYLHSGPEGGKIEMLQRNNNVCITFSLGHKLVYQHKQVACSYSMRSESAM 115 (178)
T ss_dssp HCSCEEEEEECTTSCEEEEEECCE-EETTEEEEEECSCSHHHHHHHHCCEEEEEEECCCEEEEEC----CEEEEEEEEEE
T ss_pred hCCEEEEEEECCCCcEEEEEEEEE-EECCEEEEEcCCcchHHHHhhcCCcEEEEEEeCCceeeccCCCCCCCcccEEEEE
Confidence 455799999999999999999984 566689999999999999999999999999765410 000 0246789
Q ss_pred EEEEEEEeCCcchHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCCCCCC----CceEEEEEEeeEE
Q psy14695 133 IAGKVVQLETSNWIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHDLARP----DHVIAYKLFPTFM 208 (241)
Q Consensus 133 i~G~a~~~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~~p~p----~~w~~~~l~P~~i 208 (241)
|.|+|+.+++. ++..+.++.+..+|..+ +.+.+ +..++|+|.|+++
T Consensus 116 v~G~a~~v~d~----------------------------~e~~~~l~~l~~~y~~~--~~~~~~~~~~~~~v~rI~i~~i 165 (178)
T 2fg9_A 116 CRGKVEFIEDM----------------------------EEKRHALDIIMRHYTKD--QFSYSDPAVRNVKVWKVPVDQM 165 (178)
T ss_dssp EEEECEEECSH----------------------------HHHHHHHHHHHHTTCSS--CCCCCHHHHHTCEEEEEEEEEE
T ss_pred EEEEEEEECCH----------------------------HHHHHHHHHHHHHhCCC--CCCcChHhhCCeEEEEEEeEEE
Confidence 99999999843 23333334444455322 11111 2468999999999
Q ss_pred EEeec
Q psy14695 209 DFYES 213 (241)
Q Consensus 209 Efw~~ 213 (241)
.-..-
T Consensus 166 tgK~~ 170 (178)
T 2fg9_A 166 TGKVF 170 (178)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 87653
No 31
>3cp3_A Uncharacterized protein; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID}
Probab=99.37 E-value=7.6e-12 Score=100.57 Aligned_cols=111 Identities=6% Similarity=-0.082 Sum_probs=80.1
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEE-e--CCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRL-D--EDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKV 137 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~-d--~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a 137 (241)
.+..+++|||++ +|.|++++|.+.-- + ++.|||+|. .++|..+|++||+|++++.... ....+.|.|.|+|
T Consensus 25 ~~~~~~~Lat~~-dg~P~v~Pv~f~~~~~~~~~~lyf~ta-~~~K~~~l~~np~V~~~v~~~~----~~~~~sV~v~G~a 98 (148)
T 3cp3_A 25 SSESVGRLVVHR-KDDLDIFPVNFVLDYSAEQPRVYFRTA-EGTKLFSVNLNSDVLFEVDRFD----DAEGWSVVLKGNA 98 (148)
T ss_dssp HTCSEEEEEEEE-TTEEEEEEEEEEEECSSSSCEEEEEEC---CCSSCTTSCSEEEEEEEECC------CEEEEEEEEEE
T ss_pred hcCCEEEEEEEe-CCEEEEEEEEEEEEecCCCCEEEEEcC-CCchHHHHhcCCcEEEEEEECC----CCCCeEEEEEEEE
Confidence 457789999996 99999999998632 1 456999999 9999999999999999997632 0035689999999
Q ss_pred EEeCCcc-hHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCCCCCCCceEEEEEEeeEEEEeec
Q psy14695 138 VQLETSN-WIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHDLARPDHVIAYKLFPTFMDFYES 213 (241)
Q Consensus 138 ~~~~~~~-~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~~p~p~~w~~~~l~P~~iEfw~~ 213 (241)
+.+++.+ ..+.|.. +..+| ...+..++|+|.|+++.....
T Consensus 99 ~~v~d~~e~~~~l~~-----------------------------~~~~~-------~~~~~~~viri~~~~~tgk~~ 139 (148)
T 3cp3_A 99 YVVRDTEEARHADTL-----------------------------GLKPW-------LPTLKYNFVRIDVREVSGRAF 139 (148)
T ss_dssp EECCCHHHHHHHTTS-----------------------------CCCCC-------CTTCCCEEEEEEEEEEEEEEE
T ss_pred EEECCHHHHHHHHhc-----------------------------ccccc-------CCCCceEEEEEEeEEEEEEEc
Confidence 9998643 3333331 01111 112467999999999987764
No 32
>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}
Probab=99.31 E-value=2e-11 Score=107.39 Aligned_cols=124 Identities=19% Similarity=0.129 Sum_probs=90.6
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCC-cEEEEEEecCCcCCcc-cceeEEEEEEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENP-NAAFTFLWINNVDGLY-LARQIRIAGKVV 138 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP-~val~f~~~~~~~~~~-~~rQVri~G~a~ 138 (241)
...+.++|||+++||.|++-+|.+.. +++.+||+++.-++|.++|++|| +|+|++..++..-+.+ ..+-|.|.|+|+
T Consensus 96 ~~~~~~~LAT~~~dG~P~~s~v~~~~-~~g~~~~~~s~~a~h~~NL~~nP~rvSl~v~e~e~~~~~~~~~~rltl~G~a~ 174 (251)
T 3swj_A 96 LSFNSVALATLNANGEVVCSYAPFVS-TQWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDESKAASVILRKRLRYRVNAS 174 (251)
T ss_dssp HTCSEEEEEEECTTSCEEEEEEEEEE-ETTEEEEEEETTSHHHHHHHHSTTCEEEEEECCTTTSSCTTCCCEEEEEEEEE
T ss_pred hhCCEEEEEEECCCCCEEEEEEEEEE-ECCEEEEEEeCchHHHHHHHhCCCeEEEEEEcCcccccCccccceEEEEEEEE
Confidence 46788999999999999999998864 46679999999999999999999 9999998665211111 357799999999
Q ss_pred EeCCcchHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCC--CCCCCCCceEEEEEEeeEEEEeec
Q psy14695 139 QLETSNWIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQ--HDLARPDHVIAYKLFPTFMDFYES 213 (241)
Q Consensus 139 ~~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~--~~~p~p~~w~~~~l~P~~iEfw~~ 213 (241)
++++++ +.++..+.+..+|++.. ..+..-+.|..|+|+|+.+-|-.|
T Consensus 175 ~v~~~~----------------------------e~~~~~~~~~~k~p~a~~~~~~~~~~Df~l~rl~p~~~r~v~G 223 (251)
T 3swj_A 175 FLERGE----------------------------RFDQIYDEFEKQTGGEGGIKTIRKMLDFHLVKLEFKKGRFVKG 223 (251)
T ss_dssp ECCSSH----------------------------HHHHHHHHHHHHHCSTTTHHHHHTCTTEEEEEEEEEEEEEEEE
T ss_pred EecChh----------------------------HHHHHHHHHHHHCCCchhhhhcCcccCEEEEEEEeeEEEEECC
Confidence 998531 11222334455554310 011223579999999999988875
No 33
>2hq9_A MLL6688 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FAD; 1.95A {Mesorhizobium loti} SCOP: b.45.1.1
Probab=99.26 E-value=8.7e-11 Score=94.09 Aligned_cols=78 Identities=14% Similarity=0.135 Sum_probs=64.4
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEEEe
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVVQL 140 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~~~ 140 (241)
.+..+++|||++ ||.|++++|.+. ++++.|||+| ..++|.++|++||+|++++..... + ...+.|.++|+|+.+
T Consensus 17 ~~~~~~~Lat~~-~g~P~~~pv~~~-~~~~~l~~~t-~~~~k~~~l~~~p~V~~~v~~~~~--~-~~y~sV~v~G~a~~v 90 (149)
T 2hq9_A 17 TANRVGRLACAK-DGQPYVVPLYYA-YSDAHLYAFS-MPGKKIEWMRANPRVSVQVDEHGQ--G-RGWKSVVVDGRYEEL 90 (149)
T ss_dssp HHCCEEEEEEEE-TTEEEEEEEECE-EETTEEEEEE-CSSHHHHHHHHCCEEEEEEEEECS--T-TCEEEEEEEEEEEEC
T ss_pred HhCCEEEEEEcc-CCeEEEEEEEEE-EECCEEEEEe-CccHHHHHHhcCCcEEEEEEecCC--C-CcEEEEEEEEEEEEE
Confidence 346789999999 999999999984 5666799998 689999999999999999986541 0 124679999999999
Q ss_pred CCcc
Q psy14695 141 ETSN 144 (241)
Q Consensus 141 ~~~~ 144 (241)
++.+
T Consensus 91 ~d~~ 94 (149)
T 2hq9_A 91 PDLI 94 (149)
T ss_dssp CSCG
T ss_pred cCcc
Confidence 8654
No 34
>2hti_A BH0577 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, FMN-binding protein; HET: FAD; 2.50A {Bacillus halodurans} SCOP: b.45.1.1
Probab=99.23 E-value=1.9e-10 Score=95.70 Aligned_cols=80 Identities=13% Similarity=0.057 Sum_probs=64.0
Q ss_pred ccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEec----CCc---CCcccceeEEEE
Q psy14695 62 VANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWI----NNV---DGLYLARQIRIA 134 (241)
Q Consensus 62 ~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~----~~~---~~~~~~rQVri~ 134 (241)
+..+++|||++ +|.|++++|.+. ++++.|||+|...++|+++|++||+|++++... ... +-....+.|.|.
T Consensus 24 ~~~~~~Lat~~-~g~P~~~Pv~f~-~~~~~ly~hta~~~~k~~~l~~np~V~~~v~~~~~~~~~~v~~~~t~~y~sV~v~ 101 (185)
T 2hti_A 24 KARTGFLGLST-NDQPYVIPLNFV-WHNHAIYFHGASEGRKIKMIEANPEVCFTICEDLGTIVSPVPAHTDTAYMSVIIF 101 (185)
T ss_dssp HCCCEEEEEEE-TTEEEEEEECCE-EETTEEEEEEESSSHHHHHHHHCCEEEEEEEECC-------------CEEEEEEE
T ss_pred cCCEEEEEEee-CCEEEEEEEEEE-EECCEEEEEeCCcCHHHHHhhcCCeEEEEEEeccccccccccccCcceEEEEEEE
Confidence 45679999999 789999999984 566679999999999999999999999999876 300 001135779999
Q ss_pred EEEEEeCCc
Q psy14695 135 GKVVQLETS 143 (241)
Q Consensus 135 G~a~~~~~~ 143 (241)
|+|+++++.
T Consensus 102 G~a~~v~d~ 110 (185)
T 2hti_A 102 GTIEPVSAI 110 (185)
T ss_dssp EEEEECCCH
T ss_pred EEEEEECCH
Confidence 999999864
No 35
>2fur_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Thermoplasma acidophilum} SCOP: b.45.1.1
Probab=99.19 E-value=1.7e-10 Score=98.24 Aligned_cols=81 Identities=16% Similarity=0.070 Sum_probs=65.1
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEecCCc-CC------cccceeEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNV-DG------LYLARQIRI 133 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~-~~------~~~~rQVri 133 (241)
.+..+++|||++ +|.|++++|.+. ++++.|||+|...++|+++|++||+|+++|...... .+ ....+.|.|
T Consensus 30 ~~~~~~~Lat~~-dg~P~v~Pv~f~-~~~~~lyfhta~~~~k~~~l~~np~V~~~v~~~~~~v~~~~~~~~t~~y~sV~v 107 (209)
T 2fur_A 30 DRNFTCTVSFID-GGIPYAIPMMLA-SEGKTIYLHGSMKSRIYGILKTGQLIAISLLEINGIVLAKEIKNNSINYVSALI 107 (209)
T ss_dssp HHCSEEEEEEEE-TTEEEEEEEECE-EETTEEEEEEETTSHHHHHHHTTCCEEEEEEEEEEEEECSBGGGCEEEEEEEEE
T ss_pred HhCCEEEEEEcc-CCEEEEEEEEEE-EECCEEEEEeCCcCHHHHHhhcCCeEEEEEEcCCeeecCCCCCCCccEEEEEEE
Confidence 346679999999 999999999985 456789999999999999999999999999765410 00 001477999
Q ss_pred EEEEEEeCCc
Q psy14695 134 AGKVVQLETS 143 (241)
Q Consensus 134 ~G~a~~~~~~ 143 (241)
.|+|+.+.+.
T Consensus 108 ~G~a~~v~d~ 117 (209)
T 2fur_A 108 FGRPYEIDDT 117 (209)
T ss_dssp EECCEECCCH
T ss_pred EEEEEEECCH
Confidence 9999999853
No 36
>3u5w_A Putative uncharacterized protein; ssgcid, seattle structural genomics center for infectious DI FMN-binding protein; 2.05A {Brucella melitensis biovar abortus} SCOP: b.45.1.0 PDB: 3u0i_A
Probab=99.16 E-value=4.3e-10 Score=90.80 Aligned_cols=77 Identities=16% Similarity=0.210 Sum_probs=63.5
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEEEe
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVVQL 140 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~~~ 140 (241)
....++.|||++ ||.|++.||.+. ++++.|||+|. .++|..+|++||+|++++..... ....+.|.+.|+|+.+
T Consensus 20 ~~~~~~~Lat~~-dg~P~~~Pv~~~-~~~~~ly~~~~-~g~K~~~l~~np~V~~~v~~~~~---~~~y~sV~v~G~a~~v 93 (148)
T 3u5w_A 20 QHKHVGRLGYVV-DDRPIIVPMTFR-FSGGSFYSFTT-DGQKTNAMRKNDAICILFDQIES---QTKWRTVLVQGRYREI 93 (148)
T ss_dssp HHCCEEEEEEEE-TTEEEEEEEECE-EETTEEEEEEC-CHHHHHHHHHCCEEEEEEEEESS---SSSEEEEEEEEEEEEC
T ss_pred hcCCEEEEEEcc-CCcEEEEEEEEE-EECCEEEEEEC-CchhHHHHhcCCcEEEEEEecCC---CCcEEEEEEEEEEEEe
Confidence 346679999996 899999999985 56678999995 68999999999999999986541 1135679999999999
Q ss_pred CCc
Q psy14695 141 ETS 143 (241)
Q Consensus 141 ~~~ 143 (241)
.+.
T Consensus 94 ~d~ 96 (148)
T 3u5w_A 94 ARE 96 (148)
T ss_dssp CGG
T ss_pred CCH
Confidence 864
No 37
>1xhn_A CREG, cellular repressor of E1A-stimulated genes; beta-barrel, unknown function; HET: MSE; 1.95A {Homo sapiens} SCOP: b.45.1.1
Probab=99.15 E-value=3.7e-10 Score=94.14 Aligned_cols=124 Identities=18% Similarity=0.123 Sum_probs=86.8
Q ss_pred cccceEEEEeeCC----CCceeEEEEEeeE--E-eC-CeEEEEeCCCCccchhcccCCcEEEEEEecCC-------cCCc
Q psy14695 61 LVANVMNVSTASK----DGRVNSRSLILRR--L-DE-DGFVIMTDGRSSKSKDLKENPNAAFTFLWINN-------VDGL 125 (241)
Q Consensus 61 ~~~~~~~LATv~~----dG~P~~R~V~lr~--~-d~-~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~-------~~~~ 125 (241)
...+.++|||++. +|.|.+-+|.+.. . ++ +.++|++...+.|.++|++||+|+|++.+... .|..
T Consensus 28 ~~~~~g~LaTi~~~~~~dG~P~~s~v~~~~~~~~d~~g~~~f~~s~~~~~~~nl~~nprvSl~v~~~~~~~~~~~~~dp~ 107 (184)
T 1xhn_A 28 HVSDWGALATISTLEAVRGRPFADVLSLSDGPPGAGSGVPYFYLSPLQLSVSNLQENPYATLTMTLAQTNFCKKHGFDPQ 107 (184)
T ss_dssp HHCSEEEEEEECCCGGGTTCEEEEEEECBSCSTTCCCSCCEEEECTTSHHHHHHHHCCEEEEEEEGGGTTHHHHHTCCTT
T ss_pred HhCCEEEEEecccCCCCCCcceEEEEEEEeccCcCCCCCEEEEEeCccHhHHHHhhCCCEEEEEecCCCccccccCCCCc
Confidence 3467799999998 9999999998752 0 33 45899999999999999999999999986531 1211
Q ss_pred -ccceeEEEEEEEEEeCCcchHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCCCCCCCceEEEEEE
Q psy14695 126 -YLARQIRIAGKVVQLETSNWIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHDLARPDHVIAYKLF 204 (241)
Q Consensus 126 -~~~rQVri~G~a~~~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~~p~p~~w~~~~l~ 204 (241)
+...-|.|.|+|+.+++++.++ ..+.+..++++.. .......|..|+|.
T Consensus 108 ~~~~~rvtl~G~a~~v~d~e~~~-----------------------------~~~~~~~~hP~~~-~~~~~~~~~~~~l~ 157 (184)
T 1xhn_A 108 SPLCVHIMLSGTVTKVNETEMDI-----------------------------AKHSLFIRHPEMK-TWPSSHNWFFAKLN 157 (184)
T ss_dssp STTSCEEEEEEEEEECCGGGHHH-----------------------------HHHHHHHHCGGGG-GSCGGGCCEEEEEE
T ss_pred cccCceEEEEEEEEECChHHHHH-----------------------------HHHHHHHHCcChh-HcccCCCEEEEEEE
Confidence 1256799999999998643211 1112223333221 12223578999999
Q ss_pred eeEEEEeecC
Q psy14695 205 PTFMDFYESH 214 (241)
Q Consensus 205 P~~iEfw~~~ 214 (241)
|+++.|..+-
T Consensus 158 i~~i~~v~gF 167 (184)
T 1xhn_A 158 ITNIWVLDYF 167 (184)
T ss_dssp EEEEEEECSS
T ss_pred EeEEEEEccC
Confidence 9999887753
No 38
>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}
Probab=99.08 E-value=1.4e-09 Score=96.13 Aligned_cols=124 Identities=18% Similarity=0.124 Sum_probs=90.9
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCC-cEEEEEEecCCcCCcc-cceeEEEEEEEE
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENP-NAAFTFLWINNVDGLY-LARQIRIAGKVV 138 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP-~val~f~~~~~~~~~~-~~rQVri~G~a~ 138 (241)
.+.+.++|||++++|.|++-+|.+- .+++++||+++.-|+|.++|++|| +|+|++.-++...+.+ ..+-|++.|+|+
T Consensus 96 ~~~~~~~LAT~~~~G~P~~S~v~f~-~~~g~~~iliS~lA~Ht~NL~~np~rvSllviede~~~~~~~a~~Rlt~~g~A~ 174 (259)
T 3gas_A 96 EGFDSVCLATLHPNGHVVCSYAPLM-SDGKQYYIYVSEVAEHFAGLKNNPHNVEVMFLEDESKAKSAILRKRLRYKTNTR 174 (259)
T ss_dssp HTCSEEEEEEECTTSCEEEEEEEEE-EETTEEEEEEETTSHHHHHHHHSTTSEEEEEECCTTTSSBTTBCCEEEEEEEEE
T ss_pred HhCCEEEEEeeCcCCCEEEEEEEEE-EECCEEEEEEeCchHHHHHHHhCCCeEEEEEEeCccccCChhhcCeEEEEEEEE
Confidence 4678899999999999999999986 455789999999999999999999 9999997665322222 357899999999
Q ss_pred EeCCcchHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccC---CCCCCCCCceEEEEEEeeEEEEeecC
Q psy14695 139 QLETSNWIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKG---QHDLARPDHVIAYKLFPTFMDFYESH 214 (241)
Q Consensus 139 ~~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~---~~~~p~p~~w~~~~l~P~~iEfw~~~ 214 (241)
.+.+++ +..+..+.+..+|+.. +.-.+. +.|..|+|+|..+-|-.|-
T Consensus 175 ~v~~~~----------------------------~~~~~~~~~~~r~p~~~~~~~~~~~-~DF~l~rl~p~~~r~v~GF 224 (259)
T 3gas_A 175 FIERGA----------------------------EFDKAFDSFIEKTGGAGGIKTIRAM-QDFHLIALDFKEGRFVKGF 224 (259)
T ss_dssp EECSSH----------------------------HHHHHHHHHHHHHCSTTTHHHHHTC-TTEEEEEEEEEEEEEEEET
T ss_pred ECCCch----------------------------HHHHHHHHHHHHcCCchhhHhcccC-CCeEEEEEEEeEEEEEccc
Confidence 998631 1112223444555431 000112 4699999999999988763
No 39
>2vpa_A NIMA-related protein; cofactor, atomic resolution, antibiotic resistance, oxidoreductase; 1.2A {Deinococcus radiodurans} SCOP: b.45.1.1 PDB: 1w3p_A 1w3q_A 1w3r_A* 1w3o_A 2x1k_A 2x1j_A
Probab=99.08 E-value=1.1e-09 Score=94.02 Aligned_cols=81 Identities=14% Similarity=0.062 Sum_probs=64.9
Q ss_pred cccceEEEEeeC----CCCceeEEEEEeeEEeCCe--EEEEeCCCCccchhcccCCcEEEEEEecCCc--CC-----ccc
Q psy14695 61 LVANVMNVSTAS----KDGRVNSRSLILRRLDEDG--FVIMTDGRSSKSKDLKENPNAAFTFLWINNV--DG-----LYL 127 (241)
Q Consensus 61 ~~~~~~~LATv~----~dG~P~~R~V~lr~~d~~g--~~F~T~~~S~K~~eL~~NP~val~f~~~~~~--~~-----~~~ 127 (241)
.+..+++|||++ ++|.|++++|.+. ++++. |||+|...++|+++|++||+|+++|..+... .+ ...
T Consensus 53 ~~~~~~~Lat~~~~~~~dg~P~v~Pv~f~-~d~~~~~Lyfhta~~~~K~~~l~~np~V~~~v~~~~~~v~~~~~~~~t~~ 131 (216)
T 2vpa_A 53 LRGTIARVATLWQGEDGAAFPFITPLAYA-YRPEQGDLVYHTNVVGRLRANAGQGHPATLEVSEIGQFLPSNSPLELSVQ 131 (216)
T ss_dssp HHCCEEEEEEEEECTTSCEEEEEEEEECE-EETTTTEEEEECCCCCSSBSSCSSEEEEEEEEEEEEEEECCSSGGGCEEE
T ss_pred HhCCEEEEEEccCCCCCCCceEEEEEEEE-EECCeeEEEEEecCcCHHHHHhccCCcEEEEEEeCCeeccCccCCCCccc
Confidence 346679999999 7999999999986 45555 9999999999999999999999999765410 00 001
Q ss_pred ceeEEEEEEEEEeCCc
Q psy14695 128 ARQIRIAGKVVQLETS 143 (241)
Q Consensus 128 ~rQVri~G~a~~~~~~ 143 (241)
.+.|.|.|+|+++ +.
T Consensus 132 y~sV~v~G~a~~v-d~ 146 (216)
T 2vpa_A 132 YRSVMVFGTARVL-AG 146 (216)
T ss_dssp EEEEEEEEEEEEC-CH
T ss_pred EEEEEEEEEEEEE-CH
Confidence 5789999999999 54
No 40
>3fkh_A Putative pyridoxamine 5'-phosphate oxidase; NP_601736.1, STR genomics, joint center for structural genomics, JCSG; HET: P33; 2.51A {Corynebacterium glutamicum atcc 13032}
Probab=99.03 E-value=3.9e-09 Score=84.83 Aligned_cols=76 Identities=11% Similarity=0.042 Sum_probs=56.0
Q ss_pred cccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEEEe
Q psy14695 61 LVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVVQL 140 (241)
Q Consensus 61 ~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~~~ 140 (241)
....++.|||++ ||.|++-||.+- ++++.|||+|.. ..|...|++||+||++..... +. ....|.+.|+|+.+
T Consensus 19 ~~~~~g~La~~~-dg~P~vvPv~f~-~~~~~iyfh~a~-g~K~~~i~~~~~V~f~vd~~~---~~-~~~SV~v~G~a~~v 91 (138)
T 3fkh_A 19 QSVSLGRVVVRR-SDEMDIFPVNFI-VDKGAIYIRTAE-GNKLFSMNLNHDVLFEADEVK---DG-KAWSVVVRATAEIV 91 (138)
T ss_dssp TTCSEEEEEEEE-TTEEEEEEEEEE-EETTEEEEEEEC---------CCSEEEEEEEEEE---TT-EEEEEEEEEEEEEC
T ss_pred ccCCEEEEEEee-CCEEEEEEEEEE-EECCEEEEEeCC-ChHHHHhhcCCCEEEEEEECC---CC-CCEEEEEEEEEEEE
Confidence 456789999998 999999999985 567789999998 559999999999999987543 11 34589999999999
Q ss_pred CCc
Q psy14695 141 ETS 143 (241)
Q Consensus 141 ~~~ 143 (241)
.+.
T Consensus 92 ~d~ 94 (138)
T 3fkh_A 92 RKL 94 (138)
T ss_dssp CSH
T ss_pred CCH
Confidence 853
No 41
>3dnh_A Uncharacterized protein ATU2129; APC6114, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2, protein structure initiative; 1.94A {Agrobacterium tumefaciens}
Probab=99.02 E-value=3.1e-09 Score=93.50 Aligned_cols=121 Identities=9% Similarity=0.144 Sum_probs=85.8
Q ss_pred cccceEEEEeeC-CCCceeEEEEEeeEEeCC-eEEEEeCCCCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEEEE
Q psy14695 61 LVANVMNVSTAS-KDGRVNSRSLILRRLDED-GFVIMTDGRSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGKVV 138 (241)
Q Consensus 61 ~~~~~~~LATv~-~dG~P~~R~V~lr~~d~~-g~~F~T~~~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~a~ 138 (241)
...+.++|||++ .||.|++-+|.+- ++.+ .++|++...+.|.++|++||+|+|++..+...|-. ....|.|.|+++
T Consensus 37 ~~~~~g~LaTv~~~dG~P~~s~v~y~-~d~~g~~~~~~s~~~~h~~NL~~dprvSl~V~~~~~~d~~-~~~rvtl~G~a~ 114 (258)
T 3dnh_A 37 HTSRTAALATLDPVSGYPYTTATNIG-IEPDGTPFFFAAGLTLHARNMETDARISVTLAPFGKGDAL-TLPRLTLVGRAD 114 (258)
T ss_dssp HHCCEEEEEEECTTTCCEEEEEEECE-ECTTSCEEEEEETTSHHHHHHHHCCEEEEEECCGGGSCGG-GSCEEEEEEEEE
T ss_pred HhCCEEEEEeccCCCCceEEEEEEEE-ECCCCCEEEEEeCCcHHHHHHhhCCCEEEEEecCCCCChh-hCCeEEEEEEEE
Confidence 457789999999 9999999999886 5644 47899999999999999999999999876511111 346799999999
Q ss_pred EeCCcchHhhhccCCccceeeEeecCCCCcCChHHHHHHHHHHHhhhccCCCCCCCCCceEEEEEEeeEEEEeec
Q psy14695 139 QLETSNWIDIYEAEPLFCKIRAYVCHQGQPVDWDTHKKNHDELLSKFEKGQHDLARPDHVIAYKLFPTFMDFYES 213 (241)
Q Consensus 139 ~~~~~~~~~~f~~rp~~s~i~a~~s~qs~~i~r~~l~~~~~~~~~~~~~~~~~~p~p~~w~~~~l~P~~iEfw~~ 213 (241)
.+.+++.+. ..+.+..++++.+ ....-+.|..|+|.|+++-|-.+
T Consensus 115 ~v~~~e~~~-----------------------------l~~~y~~rhP~a~-~~~~~~df~l~rl~~~~v~~v~G 159 (258)
T 3dnh_A 115 RIGPDEVPL-----------------------------AIARYIARYPKAK-LYLSLPDTRLYRLRTEGVQINGG 159 (258)
T ss_dssp ECCGGGHHH-----------------------------HHHHHHHHCTTHH-HHTSSTTEEEEEEEEEEEEEEC-
T ss_pred EcCchHHHH-----------------------------HHHHHHHHCcChH-HcccCCCeEEEEEEEeEEEEEcc
Confidence 998654211 1112222222110 01112469999999999988765
No 42
>3a6r_A FMN-binding protein; electron transport, flavoprotein; HET: FMN; 1.20A {Desulfovibrio vulgaris} PDB: 1axj_A* 1flm_A* 3awh_A* 3amf_A* 3a6q_A* 1wll_A* 3a20_A* 1wli_A* 1wlk_A* 2e83_A*
Probab=98.41 E-value=6.3e-07 Score=70.69 Aligned_cols=78 Identities=13% Similarity=0.136 Sum_probs=62.5
Q ss_pred cceEEEEeeCCCCceeEEEEEe---eEEeCCeEEEEeCCCCccchhcccCCcEEEEEEecCC--cCCcccceeEEEEEEE
Q psy14695 63 ANVMNVSTASKDGRVNSRSLIL---RRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWINN--VDGLYLARQIRIAGKV 137 (241)
Q Consensus 63 ~~~~~LATv~~dG~P~~R~V~l---r~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~~--~~~~~~~rQVri~G~a 137 (241)
...+.|||++ ||.||+-+.+. +-.|++.|++..+.-..-.++|++||+|+|+++..+. ..| ....++|+|+|
T Consensus 13 ~~~~~iaT~~-~g~Pnvvptw~~~~~v~dD~~ili~~~~~~kT~~Nl~~N~kvai~v~~~e~~g~~g--~~~gf~ikGta 89 (122)
T 3a6r_A 13 QGVVAIATQG-EDGPHLVNTWNSYLKVLDGNRIVVPVGGMHKTEANVARDERVLMTLGSRKVAGRNG--PGTGFLIRGSA 89 (122)
T ss_dssp CCEEEEEEEC-SSSEEEEEEEGGGCEEETTTEEEEEESSCHHHHHHHHHCCEEEEEEEEEEEECSSS--EEEEEEEEEEE
T ss_pred CCeEEEEEcC-CCCCcEEeeeceEEEEecCCEEEEEccccHHHHHHHhhCCeEEEEEEecccccccC--CCceEEEEEEE
Confidence 4568899999 99999998543 3446667999999988999999999999999986642 112 35679999999
Q ss_pred EEeCCc
Q psy14695 138 VQLETS 143 (241)
Q Consensus 138 ~~~~~~ 143 (241)
+.+++.
T Consensus 90 ~~~~~G 95 (122)
T 3a6r_A 90 AFRTDG 95 (122)
T ss_dssp EEESSS
T ss_pred EEEecc
Confidence 999854
No 43
>3in6_A FMN-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FMN; 2.12A {Syntrophomonas wolfei subsp}
Probab=98.18 E-value=3.2e-06 Score=68.68 Aligned_cols=70 Identities=19% Similarity=0.196 Sum_probs=54.4
Q ss_pred eEEEEeeCCCCceeEEEEEeeEE-eCCeEEEEeCCCCccchhcccCCcEEEEEE---ecCCcCCcccceeEEEEEEEEEe
Q psy14695 65 VMNVSTASKDGRVNSRSLILRRL-DEDGFVIMTDGRSSKSKDLKENPNAAFTFL---WINNVDGLYLARQIRIAGKVVQL 140 (241)
Q Consensus 65 ~~~LATv~~dG~P~~R~V~lr~~-d~~g~~F~T~~~S~K~~eL~~NP~val~f~---~~~~~~~~~~~rQVri~G~a~~~ 140 (241)
.++|||+|.||.|++-++..-.+ |++.++|.-+....=.++|++||+|+++|+ .+. ..++.||.++...+
T Consensus 32 ~~~LATAdkdG~PNVa~~~~~~~~Dd~tI~iad~f~~kT~~NL~eNP~aav~~~~~~~~~------~~KG~Rl~l~~~e~ 105 (148)
T 3in6_A 32 STTLSTVDRNYEVNIAVISVLEMIGDDTIICARFGADKTYANLKETGKGVFMVLLTDNDK------SKDGIRVYVELSAD 105 (148)
T ss_dssp SEEEEEECTTCCEEEEECCCEEEETTTEEEEEESSCHHHHHHHHHHCEEEEEEEEESSSC------EEEEEEEEEEEEEE
T ss_pred eEEEEEcCCCCCccEEEEeeeEEecCCEEEEEeccchhHHHHHHhCCcEEEEEEEcCCCC------ccceEEEEEEEEEE
Confidence 58999999999999998876544 445566655665566778999999999999 444 57888998866544
No 44
>2ol5_A PAI 2 protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.50A {Geobacillus stearothermophilus}
Probab=97.97 E-value=0.00022 Score=60.16 Aligned_cols=78 Identities=10% Similarity=0.080 Sum_probs=60.0
Q ss_pred ccceEEEEeeCCCCceeEEEEEeeEEeCC--eEEEEeCCCCccchhcccCCcEEEEEEecCC---------cCC--cccc
Q psy14695 62 VANVMNVSTASKDGRVNSRSLILRRLDED--GFVIMTDGRSSKSKDLKENPNAAFTFLWINN---------VDG--LYLA 128 (241)
Q Consensus 62 ~~~~~~LATv~~dG~P~~R~V~lr~~d~~--g~~F~T~~~S~K~~eL~~NP~val~f~~~~~---------~~~--~~~~ 128 (241)
+..+++|+|++ +|.|.+-++-+- ++++ .||||.....+|.+.|+. |+|+++|.-+.. ++. ....
T Consensus 21 ~~~~g~L~~~~-~~~py~~plpf~-~~~~~~~Ly~H~A~~n~k~~~l~~-~~V~~~~~g~~~yisps~y~~~~~vpT~nY 97 (202)
T 2ol5_A 21 ENSFATLVSMH-QRELFATHLPLL-LDREKTCLYGHFARSNPQWNDIQH-QTVLAIFHGPHCYISPSWYETNQAVPTWNY 97 (202)
T ss_dssp HSCEEEEEEEE-TTEEEEEEEECE-ECTTSSEEEEEEETTSGGGGGCTT-SCEEEEEEEEEEEECGGGSSCSCCCCEEEE
T ss_pred HCCEEEEEEcc-CCccEEEEeeEE-EECCCCEEEEEECCcChHHHhhCC-CCEEEEEEcCCEEechhhcccCCCCCCcce
Confidence 45578999998 568999888774 3454 699999999999999999 999999875431 011 1135
Q ss_pred eeEEEEEEEEEeCC
Q psy14695 129 RQIRIAGKVVQLET 142 (241)
Q Consensus 129 rQVri~G~a~~~~~ 142 (241)
+.|.+.|+++++++
T Consensus 98 ~SV~~~G~~~~v~D 111 (202)
T 2ol5_A 98 VAVHVYGNVELIND 111 (202)
T ss_dssp EEEEEEEEEEECCC
T ss_pred EEEEEEEEEEEECC
Confidence 78999999999973
No 45
>3r5l_A Deazaflavin-dependent nitroreductase; PA-824, split barrel-like fold, DUF385, deazaflavin-dependen nitroreductase, nitroimidazoles; HET: MES; 1.55A {Mycobacterium tuberculosis} PDB: 3r5p_A 3r5w_A* 3r5r_A*
Probab=97.32 E-value=0.0012 Score=51.87 Aligned_cols=76 Identities=14% Similarity=0.193 Sum_probs=59.2
Q ss_pred ccceEEEEeeCC-CCceeEEEEEeeEEeCCeEEEEeC-C----CCccchhcccCCcEEEEEEecCCcCCcccceeEEEEE
Q psy14695 62 VANVMNVSTASK-DGRVNSRSLILRRLDEDGFVIMTD-G----RSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAG 135 (241)
Q Consensus 62 ~~~~~~LATv~~-dG~P~~R~V~lr~~d~~g~~F~T~-~----~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G 135 (241)
....+.|.|++. +|+|+..+|.+.. +++++++... . .+..++||.+||.|.|... . -++.+
T Consensus 14 g~p~~~Ltt~GRkSG~pr~tPv~~~~-~g~~~~vvas~~G~~~~p~W~~Nl~A~P~v~v~~~----------~--~~~~~ 80 (122)
T 3r5l_A 14 KIPVALLTTTGRKTGQPRVNPLYFLR-DGGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIK----------K--EVLDL 80 (122)
T ss_dssp SCCCEEEEEECTTTCSEEEEEEEEEE-ETTEEEEECSCCGGGCSCHHHHHHHHCCEEEEEET----------T--EEEEE
T ss_pred CCcEEEEEEcCCCCCCEEEEEEEEEE-ECCEEEEEEecCCCCCCCHHHHhhccCCcEEEEEC----------C--EEEEE
Confidence 456789999998 7999999998864 5667776644 3 3566999999999999752 1 25788
Q ss_pred EEEEeCCcchHhhhc
Q psy14695 136 KVVQLETSNWIDIYE 150 (241)
Q Consensus 136 ~a~~~~~~~~~~~f~ 150 (241)
+|++++++|.++.|.
T Consensus 81 ~A~~l~~~Er~~~~~ 95 (122)
T 3r5l_A 81 TARDATDEERAEYWP 95 (122)
T ss_dssp EEEECCHHHHHHHHH
T ss_pred EEEECCcchHHHHHH
Confidence 999999888777775
No 46
>3r5y_A Putative uncharacterized protein; PA-824, nitroimidazoles, split barrel-like fold, DUF385, DEA dependent nitroreductase, unknown function; HET: F42; 1.80A {Nocardia farcinica}
Probab=95.67 E-value=0.082 Score=42.53 Aligned_cols=75 Identities=11% Similarity=0.222 Sum_probs=57.9
Q ss_pred cceEEEEeeCC-CCceeEEEEEeeEEeCCeEEEE-eCC----CCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEE
Q psy14695 63 ANVMNVSTASK-DGRVNSRSLILRRLDEDGFVIM-TDG----RSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGK 136 (241)
Q Consensus 63 ~~~~~LATv~~-dG~P~~R~V~lr~~d~~g~~F~-T~~----~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~ 136 (241)
...+.|.|++. .|+|+.-+|.... +++++++. ++. .+.-+.||.+||.|.|..- . -+..++
T Consensus 39 ~p~~lLtt~GRkSG~~r~tPl~~~~-~~g~~~vVas~gG~~~~p~W~~Nl~A~p~v~v~~g----------~--~~~~~~ 105 (147)
T 3r5y_A 39 RPLVILTTVGRKTGALRKTPVMRVE-HDGRYAVVASQGGAPTHPAWYFNLVADPRAQLRDK----------D--AVLSVV 105 (147)
T ss_dssp EEEEEEEEECTTTCCEEEEEEECCE-ETTEEEEECCGGGCSSCCHHHHHHHHCCEEEEEET----------T--EEEEEE
T ss_pred ccEEEEEEcCCCCCCEEEEEEEEEE-ECCEEEEEEcCCCCCCCChHHHhhhhCCcEEEEEC----------C--EEEEEE
Confidence 46789999998 6999999988765 34566555 443 4578999999999998741 1 257788
Q ss_pred EEEeCCcchHhhhc
Q psy14695 137 VVQLETSNWIDIYE 150 (241)
Q Consensus 137 a~~~~~~~~~~~f~ 150 (241)
|+.++++|.++.|.
T Consensus 106 Ar~~~~~Er~~~w~ 119 (147)
T 3r5y_A 106 ARELAGPERAEWWE 119 (147)
T ss_dssp EEECCHHHHHHHHH
T ss_pred EEECCchHHHHHHH
Confidence 99999988888886
No 47
>3r5z_A Putative uncharacterized protein; split barrel-like fold, DUF385, deazaflavin-dependent reduct F420-dependent reductase, FDR; HET: F42; 1.50A {Nocardia farcinica}
Probab=95.43 E-value=0.13 Score=41.18 Aligned_cols=75 Identities=11% Similarity=0.126 Sum_probs=56.9
Q ss_pred cceEEEEeeCC-CCceeEEEEEeeEEeCCeEEEE-eCC----CCccchhcccCCcEEEEEEecCCcCCcccceeEEEEEE
Q psy14695 63 ANVMNVSTASK-DGRVNSRSLILRRLDEDGFVIM-TDG----RSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRIAGK 136 (241)
Q Consensus 63 ~~~~~LATv~~-dG~P~~R~V~lr~~d~~g~~F~-T~~----~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri~G~ 136 (241)
...+.|.|++. .|+|+.-+|.... +++++++. ++. .+.=+.||.+||.|.|..- . -+..++
T Consensus 37 ~p~~lLtt~GRkSG~~r~tPl~~~~-~~~~~~vVas~gG~~~~p~W~~Nl~A~p~v~v~~g----------~--~~~~~~ 103 (145)
T 3r5z_A 37 KPVVVLTTKGAKTGKLRKTPLMRVE-HNGEYAVVASLGGAPKHPVWYHNIKAEPHVELRDG----------T--EVGDYT 103 (145)
T ss_dssp EEEEEEEEECTTTCCEEEEEEECEE-ETTEEEEECCBTTBSSCCHHHHHHHHCCEEEEEET----------T--EEEEEE
T ss_pred ceEEEEEEcCCCCCCEEEEEEEEEE-ECCEEEEEEcCCCCCCCChHHHHhhhCCcEEEEEC----------C--EEEEEE
Confidence 45789999988 5999999988765 44566554 443 3466889999999999751 2 256788
Q ss_pred EEEeCCcchHhhhc
Q psy14695 137 VVQLETSNWIDIYE 150 (241)
Q Consensus 137 a~~~~~~~~~~~f~ 150 (241)
|+.++++|.++.|.
T Consensus 104 Ar~~~~~Er~~~w~ 117 (145)
T 3r5z_A 104 AREVTGEEKRVWWE 117 (145)
T ss_dssp EEECCHHHHHHHHH
T ss_pred EEECCchHHHHHHH
Confidence 99999988888886
No 48
>3h96_A F420-H2 dependent reductase A; pnpox, flavin, aflatoxin, flavoprotein; 2.00A {Mycobacterium smegmatis str}
Probab=95.10 E-value=0.048 Score=43.72 Aligned_cols=77 Identities=13% Similarity=0.144 Sum_probs=59.2
Q ss_pred ccceEEEEeeCC-CCceeEEEEEeeEEeC--CeEEEE-eCC----CCccchhcccCCcEEEEEEecCCcCCcccceeEEE
Q psy14695 62 VANVMNVSTASK-DGRVNSRSLILRRLDE--DGFVIM-TDG----RSSKSKDLKENPNAAFTFLWINNVDGLYLARQIRI 133 (241)
Q Consensus 62 ~~~~~~LATv~~-dG~P~~R~V~lr~~d~--~g~~F~-T~~----~S~K~~eL~~NP~val~f~~~~~~~~~~~~rQVri 133 (241)
....+.|.|++. .|+|+.-+|.....+. +.+++. ++. .+.-+.||.+||.|.|..- . -+.
T Consensus 29 g~~~llLtt~GRkSG~~r~tPl~~~~~g~~~~~~~vvas~gG~~~~p~W~~Nl~A~p~v~v~~g----------~--~~~ 96 (143)
T 3h96_A 29 GAPMVLVHHVGRKTGKAAVTPMMYLPSDDDPGTIYVFASKAGAASNPAWYYNLTTAGTAQVEVG----------T--ETY 96 (143)
T ss_dssp TSCEEEEEEECTTTCCEEEEEEECEECSSCTTEEEEECCGGGCSSCCHHHHHHHHHSEEEEEET----------T--EEE
T ss_pred CCcEEEEEEcCCCCCCEEEEEEEEEEecCcCCcEEEEEcCCCCCCCChHHHhhhhCCcEEEEEC----------C--EEE
Confidence 356789999998 6999999988765331 566654 443 5788999999999999751 1 257
Q ss_pred EEEEEEeCCcchHhhhc
Q psy14695 134 AGKVVQLETSNWIDIYE 150 (241)
Q Consensus 134 ~G~a~~~~~~~~~~~f~ 150 (241)
.++|+.++++|.++.|.
T Consensus 97 ~~~A~~~~~~Er~~~~~ 113 (143)
T 3h96_A 97 AVGVTEVTGEDRDRIYS 113 (143)
T ss_dssp EEEEEEECHHHHHHHHH
T ss_pred EEEEEecCchHHHHHHH
Confidence 78889999888888886
No 49
>2ptf_A Uncharacterized protein MTH_863; structural genomics, unknown function, PSI-2, protein struct initiative; HET: FMN; 2.35A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.45.1.4
Probab=58.54 E-value=15 Score=31.05 Aligned_cols=55 Identities=9% Similarity=-0.038 Sum_probs=43.1
Q ss_pred ceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEe
Q psy14695 64 NVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLW 118 (241)
Q Consensus 64 ~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~ 118 (241)
.-.+++|.++||.++.-|+.+...++.-+.+.....|.=.++|++.+.+.+.+-.
T Consensus 36 ~e~vVtT~~~dG~~NlAP~s~~~~~~~~~~i~i~~~k~T~~NI~~tgefVVNi~~ 90 (233)
T 2ptf_A 36 YETIVVTWDDSMVGNAAPIGVLCTGDDTVTLYLYQGTRTVENVLNNGRFTVNVTL 90 (233)
T ss_dssp EEEEEEEECTTCCEEEEEEEEEECSSSEEEEEEETTCHHHHHHHHHSEEEEEECC
T ss_pred EEEEEEEeCCCCCEeeccEEEEEcCCCCEEEEEcCCChHHHHHHhCCEEEEEECC
Confidence 4467999999999999999887543324555555678888999999999998864
No 50
>3b5m_A Uncharacterized protein; structural genomics, unknown function, flavoprotein, PSI-2, structure initiative; 1.21A {Rhodopirellula baltica}
Probab=58.20 E-value=8.4 Score=31.95 Aligned_cols=53 Identities=23% Similarity=0.194 Sum_probs=42.4
Q ss_pred EEEEeeCCCCceeEEEEEeeEE------eCCeEEEEeCCCCccchhcccCCcEEEEEEe
Q psy14695 66 MNVSTASKDGRVNSRSLILRRL------DEDGFVIMTDGRSSKSKDLKENPNAAFTFLW 118 (241)
Q Consensus 66 ~~LATv~~dG~P~~R~V~lr~~------d~~g~~F~T~~~S~K~~eL~~NP~val~f~~ 118 (241)
.+++|.++||.++..|+-+.-. .+..+.|..+..|.-..+|++++..++.+..
T Consensus 7 ~vVTT~~~~G~~N~AP~g~~~~~~~Svs~~P~v~v~i~~~s~T~~Ni~~~g~fvVNi~~ 65 (205)
T 3b5m_A 7 SLVTTLDEQGRINLAPLGPIVLPPQSPGGLPQFLLRPYEGSTTCDNLLASGNAVIHVID 65 (205)
T ss_dssp EEEEEECTTCCEEEEEECCEEECCSSTTCCCEEEECCCTTSHHHHHHHHHCEEEEEECC
T ss_pred EEEEEcCCCCCEeecceEEEEeccccccCCCcEEEEECCCCchHHHHHHCCEEEEEECC
Confidence 6799999999999999877632 2235667777788999999999999998763
No 51
>1uv7_A General secretion pathway protein M; transport; HET: MSE; 1.7A {Vibrio cholerae} SCOP: d.67.4.1
Probab=48.16 E-value=35 Score=25.52 Aligned_cols=46 Identities=20% Similarity=0.413 Sum_probs=32.3
Q ss_pred CCCChHHHHHHHHHHHHHhcCCCccccceEEEEeeCCCCceeEEEEEee
Q psy14695 37 IPADPMQLFKSWFTHHSELHSDSNLVANVMNVSTASKDGRVNSRSLILR 85 (241)
Q Consensus 37 ~~~~P~~lf~~Wl~~A~~~~~~~~~~~~~~~LATv~~dG~P~~R~V~lr 85 (241)
+..-|+..+..||.+-..... -....+.|+-.+.+|...+|.+.+.
T Consensus 54 l~~v~F~~L~~WL~~L~~~~G---v~v~~l~l~~~~~~G~V~v~rL~l~ 99 (110)
T 1uv7_A 54 IQPLPFSQLVSWIAYLQERQG---VSVDAIDIDRGKVNGVVEVKRLQLK 99 (110)
T ss_dssp ECCBCHHHHHHHHHHHHHHSC---CEEEEEEEEEC----CEEEEEEEEE
T ss_pred ECCCCHHHHHHHHHHHHHhcC---ceEEEEEEeecCCCCEEEEEEEEee
Confidence 355689999999999875533 3677788888888999999977764
No 52
>2iml_A Hypothetical protein; FMN binding, PSI-2, structural genomics, protein structure initiative; HET: FMN; 1.65A {Archaeoglobus fulgidus} SCOP: b.45.1.4
Probab=44.73 E-value=33 Score=28.26 Aligned_cols=56 Identities=14% Similarity=0.006 Sum_probs=42.9
Q ss_pred cceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEe-CCCCccchhcccCCcEEEEEEe
Q psy14695 63 ANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMT-DGRSSKSKDLKENPNAAFTFLW 118 (241)
Q Consensus 63 ~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T-~~~S~K~~eL~~NP~val~f~~ 118 (241)
.....++|.++||.++.-|+.+...++..+.+.. ...|.=.++|.+++...+.+-.
T Consensus 14 i~ev~VtT~~~~G~~N~AP~s~~~~~~~~~~v~~~~~~k~T~~NI~~~gefVvNi~~ 70 (199)
T 2iml_A 14 INEIIAITENEDGSWNAAPIGIIVEDSSSDTAKAKLYRNRTRANLERSGVLFANVTD 70 (199)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEESCTTSSEEEEECCSSHHHHHHHHHCEEEEEECC
T ss_pred eEEEEEEEcCCCCCEEeccEEEEEcCCCCEEEEEcCCCChHHHHHHHCCEEEEEECC
Confidence 5568899999999999999988754431355554 4457778899999999988763
No 53
>2d5m_A Flavoredoxin; flavoprotein, FMN binding, electron transport; HET: FMN MES; 1.05A {Desulfovibrio vulgaris str}
Probab=34.94 E-value=38 Score=26.98 Aligned_cols=56 Identities=11% Similarity=0.053 Sum_probs=42.4
Q ss_pred eEEEEeeCCCCceeEEEEEee---EEeCCeEEEEeCCCCccchhcccCCcEEEEEEecC
Q psy14695 65 VMNVSTASKDGRVNSRSLILR---RLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLWIN 120 (241)
Q Consensus 65 ~~~LATv~~dG~P~~R~V~lr---~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~~~ 120 (241)
+++++|.+.+|.|+.-++..- ..+.--+.|.-+..|.=...|+++...++.+....
T Consensus 16 V~vVtt~~~~g~~n~~t~s~~~~vs~~Pp~v~v~i~~~~~t~~~i~~~~~f~Vnvl~~~ 74 (190)
T 2d5m_A 16 LFLVGTYDRDSRPNIMAAAWAGICCSQPPSIAVSLRKATYTYRSITERGAFTISIPSRA 74 (190)
T ss_dssp CEEEEEECTTCCEEEEEECSEEEEEETTEEEEECCCTTSHHHHHHHHHSEEEEEECBGG
T ss_pred eEEEEEecCCCceEEEEeeeeecccCCCCEEEEEEcCchhHHHHHHHCCeEEEEeCCHH
Confidence 467788888999998887654 22223466777888888899999999999887554
No 54
>3e4v_A NADH:FMN oxidoreductase like protein; YP_544701.1, structural genomics, joint center for structural genom JCSG; HET: MSE FMN; 1.40A {Methylobacillus flagellatus KT}
Probab=34.28 E-value=53 Score=26.22 Aligned_cols=56 Identities=16% Similarity=0.200 Sum_probs=42.1
Q ss_pred eEEEEeeCCCCceeEEEEEee-EEeCC--eEEEEeCCCCccchhcccCCcEEEEEEecC
Q psy14695 65 VMNVSTASKDGRVNSRSLILR-RLDED--GFVIMTDGRSSKSKDLKENPNAAFTFLWIN 120 (241)
Q Consensus 65 ~~~LATv~~dG~P~~R~V~lr-~~d~~--g~~F~T~~~S~K~~eL~~NP~val~f~~~~ 120 (241)
++.++|.+.+|.|+.-++..- .+..+ -+.|.-+..|.-...|+++...++.+...+
T Consensus 20 V~vVTt~~~~g~~n~~t~s~~~~vs~~PPlv~v~i~~~~~t~~~i~~~g~F~Vnvl~~~ 78 (186)
T 3e4v_A 20 IVLVSTRGADGRANLMTMGFHMMMQHEPPLVGAIIGPWDYSHQALSETGECVLAVPTVD 78 (186)
T ss_dssp CEEEEEECTTSCEEEEEECCEEEEETTTTEEEEECCTTSTHHHHHHHHCEEEEEECCGG
T ss_pred eEEEEEeCCCCceEEEEhhhhhhhcCCCCEEEEEEcChhHHHHHHHHCCeEEEEeCCHH
Confidence 467888799999998877643 23333 467888888888899999999999986443
No 55
>1eje_A FMN-binding protein; structural genomics, PSI, protein struc initiative; HET: FMN; 2.20A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.45.1.2
Probab=32.64 E-value=54 Score=26.23 Aligned_cols=57 Identities=7% Similarity=0.161 Sum_probs=44.0
Q ss_pred ceEEEEeeCCCCceeEEEEEee-EEeC--CeEEEEeCCCCccchhcccCCcEEEEEEecC
Q psy14695 64 NVMNVSTASKDGRVNSRSLILR-RLDE--DGFVIMTDGRSSKSKDLKENPNAAFTFLWIN 120 (241)
Q Consensus 64 ~~~~LATv~~dG~P~~R~V~lr-~~d~--~g~~F~T~~~S~K~~eL~~NP~val~f~~~~ 120 (241)
.+++++|.+.+|.|+.-++..- .+.. --+.|.-+..|.=...|+++...++.+...+
T Consensus 28 ~V~vVTt~~~~g~~n~~t~s~~~~vs~~Pp~v~v~i~~~~~T~~~i~~~~~F~Vnvl~~~ 87 (192)
T 1eje_A 28 PTVMVTTVDEEGNINAAPFSFTMPVSIDPPVVAFASAPDHHTARNIESTHEFVINITPAD 87 (192)
T ss_dssp ECEEEEEECTTCCEEEEEECSEEEEETTTTEEEEEECTTSHHHHHHHHHCEEEEEECBGG
T ss_pred ceEEEEEECCCCCeEEEEhhccchhcCCCCEEEEEECCchHHHHHHHHCCcEEEEeCCHH
Confidence 3477888888999998888743 3333 3577888888999999999999999986544
No 56
>3bpk_A Nitrilotriacetate monooxygenase component B; structural genomics, APC25244, PSI-2, protein structure initiative; 1.56A {Bacillus cereus atcc 14579}
Probab=30.39 E-value=71 Score=25.81 Aligned_cols=57 Identities=12% Similarity=0.117 Sum_probs=40.3
Q ss_pred ceEEEEeeCCCCceeEEEEEeeE-EeCC--eEEEEeCCC----CccchhcccCCcEEEEEEecC
Q psy14695 64 NVMNVSTASKDGRVNSRSLILRR-LDED--GFVIMTDGR----SSKSKDLKENPNAAFTFLWIN 120 (241)
Q Consensus 64 ~~~~LATv~~dG~P~~R~V~lr~-~d~~--g~~F~T~~~----S~K~~eL~~NP~val~f~~~~ 120 (241)
.+++++|.+.+|.|+.-|+..-. +..+ -+.|.-+.. |.=...|+++...++.+....
T Consensus 29 pV~vVtt~~~~g~~n~~t~s~~~~vs~~Pp~v~v~i~~~~~~~~~T~~~i~~~~~F~Vnil~~~ 92 (206)
T 3bpk_A 29 PVAFVTSVTKEGVLNGAPYSYFNIVAANPPLISVSVQRKAGERKDTSRNAIEKGEFVVHISDES 92 (206)
T ss_dssp ECEEEEEECTTCCEEEEEESSEEEEETTTTEEEEEEECBTTBCCHHHHHHHHHSEEEEEECBTT
T ss_pred ccEEEEEeCCCCCEEEEEeeeeecccCCCCEEEEEEcCCCCChhHHHHHHHHCCeEEEEeCCHH
Confidence 34788888899999988884422 2222 355665655 677788999999999886554
No 57
>3fge_A Putative flavin reductase with split barrel domai; YP_750721.1; 1.74A {Shewanella frigidimarina ncimb 400}
Probab=29.36 E-value=53 Score=26.61 Aligned_cols=56 Identities=7% Similarity=0.030 Sum_probs=39.3
Q ss_pred eEEEEeeCCCCceeEEEEEee-EE--eCCeEEEEeCC---CCccchhcccCCcEEEEEEecC
Q psy14695 65 VMNVSTASKDGRVNSRSLILR-RL--DEDGFVIMTDG---RSSKSKDLKENPNAAFTFLWIN 120 (241)
Q Consensus 65 ~~~LATv~~dG~P~~R~V~lr-~~--d~~g~~F~T~~---~S~K~~eL~~NP~val~f~~~~ 120 (241)
+++++|.+++|.|+.-|+..- .+ +.--+.|..+. .+.-...|+++...++.+....
T Consensus 30 V~vVtt~~~~G~~n~~t~s~~~~vs~~PPlv~v~i~~~~~~~~T~~~i~~~g~F~Vnvl~~~ 91 (203)
T 3fge_A 30 ANLIGTQDRQGNTNLSIVSSVIHLGANPPLMGMIIRPHSVPRHTFENIMQTGLYTINHVNQS 91 (203)
T ss_dssp CEEEEEECTTCCEEEEEESCCEEEEETTEEEEEEECC---CHHHHHHHHHHCEEEEEECBTT
T ss_pred cEEEEEeCCCCceeEEEeeeeehhcCCCCEEEEEeCCCCCccHHHHHHHHCCcEEEEECCHH
Confidence 468888899999988777542 12 22235566665 5666778999999999886544
No 58
>2nr4_A Conserved hypothetical protein; structural genomics, unknown function, flavoprotein, PSI-2, protein structure initiative; HET: FMN; 1.85A {Methanosarcina mazei} SCOP: b.45.1.4
Probab=29.20 E-value=52 Score=27.21 Aligned_cols=51 Identities=6% Similarity=0.002 Sum_probs=42.4
Q ss_pred EEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchhcccCCcEEEEEEe
Q psy14695 66 MNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKDLKENPNAAFTFLW 118 (241)
Q Consensus 66 ~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~eL~~NP~val~f~~ 118 (241)
..|.|.+.+ .++.-|+-+.. .++.+.+.....|.=.++|++++.+.+.+-.
T Consensus 32 ~vI~Tt~~~-~~N~APiG~~~-~~~~v~i~~~~~s~T~eNI~~~~~fvvNv~~ 82 (213)
T 2nr4_A 32 EIIASTGFE-HPNAAPIGIVM-KGERPFVRLFKGSHTWENVLKEKCLASNVVY 82 (213)
T ss_dssp EEEEEECSS-SCEEEEEEEEE-SSSSCEEEEETTSHHHHHHHHHCEEEEECCC
T ss_pred EEEEEecCC-CccccceEEEE-eCCEEEEEECCCCchHHHHhhCCEEEEEeCC
Confidence 456677888 99999998874 3457888888889999999999999999863
No 59
>1ekz_A DSRBDIII, maternal effect protein (staufen); structure, protein/RNA, protein DSRBD, RNA hairpin; NMR {Drosophila melanogaster} SCOP: d.50.1.1 PDB: 1stu_A
Probab=20.78 E-value=1.7e+02 Score=19.60 Aligned_cols=58 Identities=10% Similarity=0.117 Sum_probs=30.2
Q ss_pred CCCChHHHHHHHHHHHHHhcCCCccccceEEEEeeCCCCceeEEEEEeeEEeCCeEEEEeCCCCccchh
Q psy14695 37 IPADPMQLFKSWFTHHSELHSDSNLVANVMNVSTASKDGRVNSRSLILRRLDEDGFVIMTDGRSSKSKD 105 (241)
Q Consensus 37 ~~~~P~~lf~~Wl~~A~~~~~~~~~~~~~~~LATv~~dG~P~~R~V~lr~~d~~g~~F~T~~~S~K~~e 105 (241)
...||...+.+|.+. .+. . |.+-. +...|.+|.+.-...-.- ++++..-...|.|..+
T Consensus 5 ~~~d~ks~LqE~~q~---~~~---~-p~Y~~---~~~~Gp~h~~~F~~~v~i-~~~~~~G~G~sKK~Ae 62 (76)
T 1ekz_A 5 DKKSPISQVHEIGIK---RNM---T-VHFKV---LREEGPAHMKNFITACIV-GSIVTEGEGNGKKVSK 62 (76)
T ss_dssp CCSCHHHHHHHHHHH---TTC---C-CEEEE---SSSCCSSSCSCSSEEEEE-TTEEEEECCCSTTSSS
T ss_pred CCCCHHHHHHHHHHH---cCC---C-CEEEE---EEeECCCCCCcEEEEEEE-CCEEEEEeeCCHHHHH
Confidence 456899999888754 333 3 54443 444565555432222111 2344444445666544
Done!