BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14697
(175 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DH66|TM20B_DANRE Mitochondrial import receptor subunit TOM20 homolog B OS=Danio
rerio GN=tomm20b PE=1 SV=1
Length = 146
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 95/128 (74%)
Query: 43 LISGNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPD 102
++ G+ A +GAA+ VGYC+YFD+KRRSDP +K KL+ERR+K + ++ +PD
Sbjct: 1 MMGGSSSRIAAGLGAALFVGYCIYFDRKRRSDPNYKNKLRERRKKQKAAQEKAGLSRLPD 60
Query: 103 LKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVF 162
LKD AVQ++FL+EIQLGE LLA GD + GV+HL NA+ VCGQP QLL VLQQTLPP VF
Sbjct: 61 LKDAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVF 120
Query: 163 NALIEKLP 170
L+ KLP
Sbjct: 121 QMLLTKLP 128
>sp|Q8AVY0|TOM20_XENLA Mitochondrial import receptor subunit TOM20 homolog OS=Xenopus
laevis GN=tomm20 PE=2 SV=1
Length = 147
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 92/125 (73%)
Query: 46 GNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKD 105
G A V A+++GYC+YFD+KRRSDP FK +L+E+RRK + ++ + +PDLKD
Sbjct: 5 GKTSAIAAGVCGALLLGYCIYFDRKRRSDPNFKNRLREKRRKQKIAKERAGQSRLPDLKD 64
Query: 106 HSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNAL 165
AVQ++FL+EIQLGE LLA GD + GV+HL NA+ +CGQP QLL VLQQTLPP VF L
Sbjct: 65 AEAVQKFFLEEIQLGEELLAQGDFEKGVDHLTNAIAICGQPQQLLQVLQQTLPPPVFQML 124
Query: 166 IEKLP 170
+ KLP
Sbjct: 125 LTKLP 129
>sp|Q6DFM9|TOM20_XENTR Mitochondrial import receptor subunit TOM20 homolog OS=Xenopus
tropicalis GN=tomm20 PE=2 SV=1
Length = 147
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 93/128 (72%)
Query: 43 LISGNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPD 102
++ G A V A+ +GYC+YFD+KRRSDP FK +L+E+RRK + ++ + +PD
Sbjct: 2 VVVGKTSAIAAGVCGALFLGYCIYFDRKRRSDPNFKNRLREKRRKQKIAKERAGQSRLPD 61
Query: 103 LKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVF 162
LKD AVQ++FL+EIQLGE LLA GD + GV+HL NA+ +CGQP QLL VLQQTLPP VF
Sbjct: 62 LKDAEAVQKFFLEEIQLGEELLAQGDFEKGVDHLTNAIAICGQPQQLLQVLQQTLPPPVF 121
Query: 163 NALIEKLP 170
L+ KLP
Sbjct: 122 QMLLTKLP 129
>sp|Q62760|TOM20_RAT Mitochondrial import receptor subunit TOM20 homolog OS=Rattus
norvegicus GN=Tomm20 PE=1 SV=2
Length = 145
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 90/125 (72%)
Query: 46 GNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKD 105
G A V A+ +GYC+YFD+KRRSDP FK +L+ERR+K + ++ +PDLKD
Sbjct: 3 GRNSAIAAGVCGALFIGYCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKD 62
Query: 106 HSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNAL 165
AVQ++FL+EIQLGE LLA GD + GV+HL NA+ VCGQP QLL VLQQTLPP VF L
Sbjct: 63 AEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQML 122
Query: 166 IEKLP 170
+ KLP
Sbjct: 123 LTKLP 127
>sp|Q9DCC8|TOM20_MOUSE Mitochondrial import receptor subunit TOM20 homolog OS=Mus musculus
GN=Tomm20 PE=1 SV=1
Length = 145
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 90/125 (72%)
Query: 46 GNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKD 105
G A V A+ +GYC+YFD+KRRSDP FK +L+ERR+K + ++ +PDLKD
Sbjct: 3 GRNSAIAAGVCGALFIGYCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKD 62
Query: 106 HSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNAL 165
AVQ++FL+EIQLGE LLA GD + GV+HL NA+ VCGQP QLL VLQQTLPP VF L
Sbjct: 63 AEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQML 122
Query: 166 IEKLP 170
+ KLP
Sbjct: 123 LTKLP 127
>sp|Q5RA31|TOM20_PONAB Mitochondrial import receptor subunit TOM20 homolog OS=Pongo abelii
GN=TOMM20 PE=2 SV=1
Length = 145
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 90/125 (72%)
Query: 46 GNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKD 105
G A V A+ +GYC+YFD+KRRSDP FK +L+ERR+K + ++ +PDLKD
Sbjct: 3 GRNSAIAAGVCGALFIGYCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKD 62
Query: 106 HSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNAL 165
AVQ++FL+EIQLGE LLA G+ + GV+HL NA+ VCGQP QLL VLQQTLPP VF L
Sbjct: 63 AEAVQKFFLEEIQLGEELLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQML 122
Query: 166 IEKLP 170
+ KLP
Sbjct: 123 LTKLP 127
>sp|Q15388|TOM20_HUMAN Mitochondrial import receptor subunit TOM20 homolog OS=Homo sapiens
GN=TOMM20 PE=1 SV=1
Length = 145
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 90/125 (72%)
Query: 46 GNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKD 105
G A V A+ +GYC+YFD+KRRSDP FK +L+ERR+K + ++ +PDLKD
Sbjct: 3 GRNSAIAAGVCGALFIGYCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKD 62
Query: 106 HSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNAL 165
AVQ++FL+EIQLGE LLA G+ + GV+HL NA+ VCGQP QLL VLQQTLPP VF L
Sbjct: 63 AEAVQKFFLEEIQLGEELLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQML 122
Query: 166 IEKLP 170
+ KLP
Sbjct: 123 LTKLP 127
>sp|A6H7B1|TOM20_BOVIN Mitochondrial import receptor subunit TOM20 homolog OS=Bos taurus
GN=TOMM20 PE=2 SV=1
Length = 145
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 90/125 (72%)
Query: 46 GNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKD 105
G A V A+ +GYC+YFD+KRRSDP FK +L+ERR+K + ++ +PDLKD
Sbjct: 3 GRNSAIAAGVCGALFIGYCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDLKD 62
Query: 106 HSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNAL 165
AVQ++FL+EIQLGE LLA G+ + GV+HL NA+ VCGQP QLL VLQQTLPP VF L
Sbjct: 63 AEAVQKFFLEEIQLGEELLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQML 122
Query: 166 IEKLP 170
+ KLP
Sbjct: 123 LTKLP 127
>sp|Q19766|TOM20_CAEEL Mitochondrial import receptor subunit TOM20 homolog
OS=Caenorhabditis elegans GN=tomm-20 PE=1 SV=1
Length = 188
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 84/131 (64%), Gaps = 7/131 (5%)
Query: 47 NKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKR-------G 99
+ VV A + A +GYC+YFD KR + P +K+K++++RR +R
Sbjct: 11 SNVVLAAGIAGAAFLGYCIYFDHKRINAPDYKDKIRQKRRAQAGAGGMAPRRPAAAGNDA 70
Query: 100 IPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPP 159
PD+ D S +Q++FLQE+QLGE L+AAG++D G H+ANA+ +CG+ QLL + QQTL
Sbjct: 71 APDVTDPSQMQRFFLQEVQLGEELMAAGNVDEGAVHIANAVMLCGESQQLLSIFQQTLSE 130
Query: 160 NVFNALIEKLP 170
+ F A++++LP
Sbjct: 131 DQFRAVVQQLP 141
>sp|A8Y3V5|TOM20_CAEBR Mitochondrial import receptor subunit TOM20 homolog
OS=Caenorhabditis briggsae GN=tomm-20 PE=3 SV=1
Length = 188
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 75/115 (65%), Gaps = 7/115 (6%)
Query: 63 YCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRG-------IPDLKDHSAVQQYFLQ 115
YC+YFD KR + P +K+K++++RR +R PD+ D S +Q++FLQ
Sbjct: 27 YCIYFDHKRINAPDYKDKIRQKRRAQAGSGGMAARRPPAGGNEMAPDVTDPSQMQRFFLQ 86
Query: 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLP 170
E+QLGE L+AAG+++ G H+ANA+ +CG+ QLL + QQTL F A++++LP
Sbjct: 87 EVQLGEELMAAGNVEEGAVHIANAVMLCGESQQLLSIFQQTLSEEQFRAVVQQLP 141
>sp|Q6UXN7|TO20L_HUMAN TOMM20-like protein 1 OS=Homo sapiens GN=TOMM20L PE=2 SV=1
Length = 152
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 73/109 (66%), Gaps = 1/109 (0%)
Query: 62 GYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKDHSAVQQYFLQEIQLGE 121
GYC+Y ++KRR DP FK +L+++RR + +++ + + D + +Q+ FLQE+++GE
Sbjct: 24 GYCIYLNRKRRGDPAFKRRLRDKRRAEPQKAEEQGTQ-LWDPTKNKKLQELFLQEVRMGE 82
Query: 122 TLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLP 170
L+ G+ G++HL NAL VC QP +LL V + TLPP VF L+ K+P
Sbjct: 83 LWLSRGEHRMGIQHLGNALLVCEQPRELLKVFKHTLPPKVFEMLLHKIP 131
>sp|Q9D4V6|TO20L_MOUSE TOMM20-like protein 1 OS=Mus musculus GN=Tomm20l PE=2 SV=1
Length = 152
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 1/109 (0%)
Query: 62 GYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKDHSAVQQYFLQEIQLGE 121
YC+Y D +R DP F+ +L+++RR + Q R + D +Q+YF +E+Q+G+
Sbjct: 24 SYCVYLDWRRHRDPAFRRRLQDKRRAGQPKAQ-APARQLWDPVKKEELQEYFFREVQMGK 82
Query: 122 TLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLP 170
L G+ G EHL NAL VC QP +LL ++TLPP VF L++K+P
Sbjct: 83 LCLIRGERGMGFEHLTNALLVCEQPKELLMFFKKTLPPEVFQMLLDKIP 131
>sp|O14225|TOM20_SCHPO Mitochondrial import receptor subunit tom20 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=tom20 PE=3 SV=1
Length = 152
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 21/129 (16%)
Query: 57 AAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIP--DLKDHSAVQQ--- 111
A VGY +YFD KRR+DP F++ LK R +K E +Q+ K D+ A+Q
Sbjct: 12 ATAAVGYAIYFDYKRRNDPHFRKTLKRRYKKVHEAKKQEEKLATKKFDITVEEALQVVAS 71
Query: 112 ------------YFLQEIQLGETLLAAGDLDNGVEHLA---NALTVCGQPNQLLGVLQQT 156
+F+Q++ GE L DN E A +AL V QP +L + ++T
Sbjct: 72 TPVPSSAEEKELFFMQQVARGEQLFQQQP-DNIKESAACFYSALKVYPQPVELFAIYERT 130
Query: 157 LPPNVFNAL 165
+P + N L
Sbjct: 131 VPEPIMNLL 139
>sp|P35180|TOM20_YEAST Mitochondrial import receptor subunit TOM20 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TOM20 PE=1
SV=1
Length = 183
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 28/156 (17%)
Query: 43 LISGNKVVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKN------ 96
++ G + TA+A +A GY +YFD +RR+ P F++ L++R ++ ++ +Q
Sbjct: 7 ILRGLAITTAIAALSAT--GYAIYFDYQRRNSPQFRKVLRQRAKEQAKMEEQAKTHAKEV 64
Query: 97 --------------KRGIPDLKDHSAVQQYFLQEIQLGETL-LAAGDLDNGVEHLANALT 141
K IP D S + F ++ GE L + G ALT
Sbjct: 65 KLQKVTEFLSMELAKDPIPS--DPSEREATFTTNVENGERLSMQQGKELEAASKFYKALT 122
Query: 142 VCGQPNQLLGVLQQTLPPNVFNA---LIEKLPPAGI 174
V QP LLG+ Q+++P ++ +I LPPA +
Sbjct: 123 VYPQPADLLGIYQRSIPEAIYEYIILMIAILPPANV 158
>sp|Q9UPQ0|LIMC1_HUMAN LIM and calponin homology domains-containing protein 1 OS=Homo
sapiens GN=LIMCH1 PE=1 SV=4
Length = 1083
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 69 KKRRSDPLFKEKLKERRRKNRELLQQ-KNKRGIPDLKDHSAVQQYFLQEIQLGETLLAAG 127
++R+S ++E ++E+ R+ REL + KN R ++ + Q +++ + E +L
Sbjct: 404 ERRKSIKTYREIVQEKERRERELHEAYKNAR---SQEEAEGILQQYIERFTISEAVLERL 460
Query: 128 DLDNGVEHL----ANALTVCGQPNQLLGVLQQTLPPNVFNALIE 167
++ +E N + PN + + QQ+LPP F A +E
Sbjct: 461 EMPKILERSHSTEPNLSSFLNDPNPMKYLRQQSLPPPKFTATVE 504
>sp|P35848|TOM20_NEUCR Mitochondrial import receptor subunit tom-20 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=tom-20 PE=3 SV=1
Length = 181
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 26/131 (19%)
Query: 61 VGYCLYFDKKRRSDPLF-------KEKLKERRRKNREL------------LQQKNKRGIP 101
+ Y +YFD KRR+DP F + + ++ EL + + + G P
Sbjct: 21 LAYAVYFDYKRRNDPEFRRQLRRSARRQARQEKEYAELSQQAQRQRIRQMVDEAKEEGFP 80
Query: 102 DLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVE---HLANALTVCGQPNQLLGVLQQTLP 158
D + YFL+++Q GE L D ++ AL V P L+ + +T+
Sbjct: 81 TTSDEK--EAYFLEQVQAGEIL--GQDPTKAIDASLAFYKALKVYPTPGDLISIYDKTVA 136
Query: 159 PNVFNALIEKL 169
+ + L E +
Sbjct: 137 KPILDILAEMI 147
>sp|Q3UH68|LIMC1_MOUSE LIM and calponin homology domains-containing protein 1 OS=Mus
musculus GN=Limch1 PE=1 SV=2
Length = 1057
Score = 37.0 bits (84), Expect = 0.065, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 69 KKRRSDPLFKEKLKERRRKNRELLQQ-KNKRGIPDLKDHSAVQQYFLQEIQLGETLLAAG 127
++R+S ++E ++E+ R+ REL + KN R ++ + Q +++ + E +L
Sbjct: 404 ERRKSIKTYREIVQEKERRERELHEAYKNAR---SQEEAEGILQQYIERFTISEAVLERL 460
Query: 128 DLDNGVEHL----ANALTVCGQPNQLLGVLQQTLPPNVFNALIE 167
++ +E N + P+ + + QQ+LPP F A +E
Sbjct: 461 EMPKILERSHSTEPNVSSFPNDPSPMKYLRQQSLPPPKFTATVE 504
>sp|Q2UH15|GPI10_ASPOR GPI mannosyltransferase 3 OS=Aspergillus oryzae (strain ATCC 42149
/ RIB 40) GN=gpi10 PE=3 SV=1
Length = 728
Score = 32.7 bits (73), Expect = 1.1, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 113 FLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLPPA 172
F Q + ++L A G H AN T+CG P+ L +LQ L P + AL P +
Sbjct: 75 FFQPDEFFQSLEPAWQTAFGETHGANGDTICGLPSILCYLLQFILSPTLPRALFVSPPHS 134
Query: 173 GIV 175
I+
Sbjct: 135 AIL 137
>sp|B3ER86|CINAL_AMOA5 CinA-like protein OS=Amoebophilus asiaticus (strain 5a2)
GN=Aasi_0301 PE=3 SV=1
Length = 416
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKL 169
I +G LL LD+ +H++ AL+ G L V+Q T+ P+ A++E L
Sbjct: 6 ISIGNELLQGQILDSNAQHISTALSQIG-----LKVMQITVLPDEIEAIVEAL 53
>sp|Q26061|FRI_PACLE Ferritin OS=Pacifastacus leniusculus PE=1 SV=1
Length = 181
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 25/116 (21%)
Query: 47 NKVVTAVAVGAAVVVGYCLYFDKKRRSDP----LFKEKLKERRRKNRELLQQKNKRG--- 99
NK + + V + YFD+ S P FK+ E R ++L++ +NKRG
Sbjct: 17 NKQINLEFYASYVYMSMGHYFDRDDISLPGASKFFKDSSDEEREHGQKLMKYQNKRGARI 76
Query: 100 ------IPDLKD----HSAVQQYFLQEIQLGETLLAAGDLDNGVE-----HLANAL 140
P L++ H A+Q E ++ ++LL DLD HL N L
Sbjct: 77 VLQAIAAPSLQEWGNLHDALQAALDLENEVNQSLL---DLDATASKINDPHLTNML 129
>sp|B2VE39|ZIPA_ERWT9 Cell division protein ZipA homolog OS=Erwinia tasmaniensis (strain
DSM 17950 / Et1/99) GN=zipA PE=3 SV=1
Length = 304
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 49 VVTAVAVGAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKDHSA 108
VV A+A+ A ++ G L+ +K RS +F+++ +R ++NRE + ++ G+ +++ H A
Sbjct: 10 VVGAIAIIALLLHG--LWTSRKERSS-VFRDRPHKRLKQNREEAFEDDEEGVGEVRTHRA 66
Query: 109 VQQYFLQEIQLGETLLAAGD 128
+ E LGE L GD
Sbjct: 67 SAE--APEPSLGE--LDPGD 82
>sp|Q0P5X1|LRIQ1_MOUSE Leucine-rich repeat and IQ domain-containing protein 1 OS=Mus
musculus GN=Lrriq1 PE=2 SV=2
Length = 1673
Score = 30.4 bits (67), Expect = 6.0, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 31 IGPSGRLMSPMELISGNKVVTAVAV--GAAVVVGYCLYFDKKRRSDPLFKEKLKERRRKN 88
+ PS R +S E+I+ + + + A + GY ++ R+S +++K +E K+
Sbjct: 134 LAPSARCVSVREIITPDTPMDEYILPDEADLSFGYFEVEERCRKSFEAWQDKQQELEEKD 193
Query: 89 RELLQQKNKRGIPDLKDHSAVQQYFLQEIQL 119
+E L+ +N+R ++ +Q ++++ ++
Sbjct: 194 KETLEAQNEREKRTFQEEDEKRQCWMRQFEV 224
>sp|O24243|MDL1_PRUDU (R)-mandelonitrile lyase 1 OS=Prunus dulcis GN=MDL1 PE=2 SV=1
Length = 559
Score = 29.6 bits (65), Expect = 9.5, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 130 DNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLPPAGIV 175
+NG H A+ L G PN LL +Q ++ +F++ L G++
Sbjct: 217 NNGTRHAADELLNKGDPNNLLVAVQASVEKILFSSNTSNLSAIGVI 262
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.140 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,549,804
Number of Sequences: 539616
Number of extensions: 2770643
Number of successful extensions: 9231
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 9202
Number of HSP's gapped (non-prelim): 30
length of query: 175
length of database: 191,569,459
effective HSP length: 110
effective length of query: 65
effective length of database: 132,211,699
effective search space: 8593760435
effective search space used: 8593760435
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)