Query psy14697
Match_columns 175
No_of_seqs 111 out of 204
Neff 4.1
Searched_HMMs 29240
Date Fri Aug 16 18:19:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14697.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14697hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ax2_A Mitochondrial import re 100.0 8.5E-34 2.9E-38 203.5 5.7 72 98-169 2-73 (73)
2 1om2_A Protein (mitochondrial 100.0 2.7E-33 9.2E-38 209.7 7.1 78 96-173 3-80 (95)
3 4gcn_A Protein STI-1; structur 89.9 0.74 2.5E-05 32.2 5.8 33 116-148 11-43 (127)
4 4gco_A Protein STI-1; structur 89.8 0.78 2.7E-05 32.2 5.9 27 119-145 19-45 (126)
5 3gyz_A Chaperone protein IPGC; 88.9 0.73 2.5E-05 34.2 5.4 31 117-147 108-138 (151)
6 2kc7_A BFR218_protein; tetratr 86.5 0.51 1.7E-05 30.4 2.9 35 116-150 38-72 (99)
7 4gco_A Protein STI-1; structur 85.9 1.2 4.1E-05 31.2 4.8 39 117-155 85-123 (126)
8 4gcn_A Protein STI-1; structur 85.7 1.2 4E-05 31.1 4.7 33 117-149 87-119 (127)
9 2kc7_A BFR218_protein; tetratr 85.7 0.77 2.6E-05 29.5 3.5 33 116-148 3-35 (99)
10 3k9i_A BH0479 protein; putativ 85.4 1.2 4.2E-05 30.0 4.6 29 118-146 32-60 (117)
11 2l6j_A TPR repeat-containing p 85.1 1.4 4.9E-05 28.2 4.6 30 117-146 42-71 (111)
12 3vtx_A MAMA; tetratricopeptide 84.7 1.1 3.9E-05 31.8 4.2 30 118-147 10-39 (184)
13 2vgx_A Chaperone SYCD; alterna 84.3 1.4 4.9E-05 31.6 4.7 30 117-146 93-122 (148)
14 2r5s_A Uncharacterized protein 83.9 1.8 6.3E-05 31.1 5.2 31 117-147 112-142 (176)
15 1a17_A Serine/threonine protei 83.4 3.7 0.00013 27.9 6.4 32 117-148 51-82 (166)
16 1na3_A Designed protein CTPR2; 83.2 2 7E-05 26.5 4.6 34 117-150 47-80 (91)
17 3upv_A Heat shock protein STI1 83.2 1.8 6.1E-05 29.0 4.6 32 117-148 42-73 (126)
18 1na3_A Designed protein CTPR2; 82.8 2.2 7.4E-05 26.4 4.6 32 117-148 13-44 (91)
19 3upv_A Heat shock protein STI1 82.4 2 6.9E-05 28.8 4.6 39 117-155 76-120 (126)
20 2xcb_A PCRH, regulatory protei 81.3 3.8 0.00013 28.4 5.9 32 117-148 56-87 (142)
21 2dba_A Smooth muscle cell asso 81.1 2.3 7.9E-05 28.3 4.5 38 117-154 103-140 (148)
22 2xev_A YBGF; tetratricopeptide 81.0 2.8 9.4E-05 27.7 4.8 34 117-150 80-113 (129)
23 2dba_A Smooth muscle cell asso 80.7 2.4 8.3E-05 28.2 4.5 28 118-145 33-60 (148)
24 1elw_A TPR1-domain of HOP; HOP 80.3 2.9 9.9E-05 26.4 4.6 31 117-147 42-72 (118)
25 2l6j_A TPR repeat-containing p 80.2 2.8 9.5E-05 26.8 4.5 34 117-150 8-41 (111)
26 1elr_A TPR2A-domain of HOP; HO 80.0 3.1 0.00011 26.8 4.7 33 116-148 82-114 (131)
27 1elw_A TPR1-domain of HOP; HOP 79.8 3 0.0001 26.3 4.5 38 117-154 76-113 (118)
28 3ma5_A Tetratricopeptide repea 79.2 2.6 9.1E-05 27.9 4.2 27 118-144 46-72 (100)
29 2kck_A TPR repeat; tetratricop 79.1 3.3 0.00011 25.9 4.5 29 117-145 44-72 (112)
30 2vyi_A SGTA protein; chaperone 78.7 5.7 0.00019 25.3 5.6 31 117-147 50-80 (131)
31 3q49_B STIP1 homology and U bo 78.2 3.3 0.00011 27.5 4.6 30 117-146 47-76 (137)
32 1hxi_A PEX5, peroxisome target 78.1 3.2 0.00011 28.6 4.6 32 117-148 55-86 (121)
33 4i17_A Hypothetical protein; T 78.0 5.4 0.00018 29.3 6.0 44 102-145 106-149 (228)
34 2xcb_A PCRH, regulatory protei 77.9 1.7 5.7E-05 30.3 3.0 35 117-151 90-124 (142)
35 2lni_A Stress-induced-phosphop 77.8 3.1 0.00011 27.0 4.2 36 117-152 88-123 (133)
36 3sz7_A HSC70 cochaperone (SGT) 77.8 3.2 0.00011 29.3 4.6 30 117-146 49-78 (164)
37 3k9i_A BH0479 protein; putativ 77.7 2.2 7.5E-05 28.7 3.5 35 117-151 65-99 (117)
38 3qou_A Protein YBBN; thioredox 77.7 5.2 0.00018 31.6 6.2 39 117-155 223-267 (287)
39 2fbn_A 70 kDa peptidylprolyl i 77.6 4.7 0.00016 29.3 5.5 42 105-146 30-71 (198)
40 1elr_A TPR2A-domain of HOP; HO 77.6 3.8 0.00013 26.3 4.6 27 118-144 43-69 (131)
41 1a17_A Serine/threonine protei 77.4 3.9 0.00013 27.8 4.8 34 117-150 85-118 (166)
42 2xev_A YBGF; tetratricopeptide 77.4 3.9 0.00013 26.9 4.7 30 117-146 43-72 (129)
43 3uq3_A Heat shock protein STI1 76.5 4 0.00014 29.6 4.9 25 119-143 213-237 (258)
44 2kck_A TPR repeat; tetratricop 75.6 4 0.00014 25.5 4.2 33 117-149 10-42 (112)
45 2lni_A Stress-induced-phosphop 75.1 3 0.0001 27.1 3.5 28 118-145 55-82 (133)
46 2vyi_A SGTA protein; chaperone 74.5 5.4 0.00019 25.4 4.6 34 117-150 84-117 (131)
47 4ga2_A E3 SUMO-protein ligase 74.3 7.3 0.00025 27.6 5.7 32 117-148 69-100 (150)
48 2kat_A Uncharacterized protein 74.2 5 0.00017 26.4 4.6 27 118-144 58-84 (115)
49 3urz_A Uncharacterized protein 72.9 11 0.00036 28.0 6.5 28 119-146 60-87 (208)
50 1na0_A Designed protein CTPR3; 72.4 6.3 0.00022 24.9 4.6 32 117-148 47-78 (125)
51 3bee_A Putative YFRE protein; 72.3 13 0.00043 25.5 6.4 65 60-145 11-75 (93)
52 2vgx_A Chaperone SYCD; alterna 72.3 9.1 0.00031 27.2 5.9 29 117-145 59-87 (148)
53 4ga2_A E3 SUMO-protein ligase 72.3 5.3 0.00018 28.4 4.6 33 117-149 35-67 (150)
54 3rkv_A Putative peptidylprolyl 71.3 4 0.00014 28.7 3.7 32 113-144 11-42 (162)
55 3qou_A Protein YBBN; thioredox 71.2 12 0.00041 29.5 6.9 28 117-144 121-148 (287)
56 3rkv_A Putative peptidylprolyl 71.2 6.2 0.00021 27.7 4.7 31 117-147 101-131 (162)
57 3urz_A Uncharacterized protein 71.1 7.8 0.00027 28.8 5.4 33 117-149 92-124 (208)
58 2fbn_A 70 kDa peptidylprolyl i 70.8 5.5 0.00019 28.9 4.4 38 117-154 126-163 (198)
59 2e2e_A Formate-dependent nitri 69.4 5.1 0.00017 28.3 3.9 36 117-152 119-154 (177)
60 2hr2_A Hypothetical protein; a 69.3 3.1 0.00011 32.4 2.9 29 117-145 15-43 (159)
61 3gyz_A Chaperone protein IPGC; 69.0 4.4 0.00015 29.8 3.6 30 117-146 74-103 (151)
62 3sz7_A HSC70 cochaperone (SGT) 68.8 7.1 0.00024 27.4 4.6 32 117-148 83-114 (164)
63 2gw1_A Mitochondrial precursor 68.6 8.3 0.00028 31.2 5.4 31 118-148 44-74 (514)
64 1na0_A Designed protein CTPR3; 68.2 9.2 0.00032 24.1 4.6 37 117-153 81-117 (125)
65 3u4t_A TPR repeat-containing p 68.2 6.5 0.00022 29.1 4.4 42 116-157 224-265 (272)
66 1hxi_A PEX5, peroxisome target 67.9 7.9 0.00027 26.6 4.6 30 117-146 89-118 (121)
67 3q49_B STIP1 homology and U bo 67.8 8.4 0.00029 25.5 4.6 29 117-145 81-109 (137)
68 3vtx_A MAMA; tetratricopeptide 67.7 7.7 0.00026 27.3 4.6 32 117-148 111-142 (184)
69 3qky_A Outer membrane assembly 67.6 11 0.00038 28.4 5.7 31 116-146 151-181 (261)
70 2pl2_A Hypothetical conserved 67.1 11 0.00039 28.1 5.6 41 102-149 35-75 (217)
71 2yhc_A BAMD, UPF0169 lipoprote 66.7 7.3 0.00025 29.1 4.5 32 116-147 150-181 (225)
72 3fp2_A TPR repeat-containing p 65.8 12 0.00042 30.6 6.0 33 112-144 24-56 (537)
73 2fo7_A Synthetic consensus TPR 65.0 11 0.00038 23.8 4.6 32 117-148 73-104 (136)
74 2pl2_A Hypothetical conserved 64.4 7.8 0.00027 29.0 4.2 30 118-147 156-185 (217)
75 2yhc_A BAMD, UPF0169 lipoprote 63.7 10 0.00034 28.4 4.7 31 117-147 45-75 (225)
76 2fo7_A Synthetic consensus TPR 63.7 11 0.00036 23.9 4.2 33 117-149 39-71 (136)
77 4fdd_A Transportin-1; heat rep 63.5 6.1 0.00021 36.2 4.1 69 100-171 763-840 (852)
78 2e2e_A Formate-dependent nitri 63.1 9.4 0.00032 26.8 4.3 31 117-147 48-78 (177)
79 3ieg_A DNAJ homolog subfamily 62.3 10 0.00035 28.7 4.6 32 117-148 41-72 (359)
80 4h7y_A Dual specificity protei 61.5 9.1 0.00031 30.7 4.3 38 117-154 98-135 (161)
81 2kat_A Uncharacterized protein 61.5 3.1 0.00011 27.5 1.3 30 117-146 23-52 (115)
82 4i17_A Hypothetical protein; T 61.0 12 0.0004 27.4 4.6 32 117-148 80-111 (228)
83 3fp2_A TPR repeat-containing p 61.0 25 0.00084 28.8 7.0 45 102-146 232-276 (537)
84 3ieg_A DNAJ homolog subfamily 60.4 11 0.00037 28.6 4.4 28 118-145 277-304 (359)
85 3ma5_A Tetratricopeptide repea 60.4 5.5 0.00019 26.3 2.4 31 117-147 11-41 (100)
86 3qky_A Outer membrane assembly 60.1 9.1 0.00031 28.9 3.9 29 117-145 56-84 (261)
87 2vq2_A PILW, putative fimbrial 58.7 14 0.00049 25.9 4.6 32 117-148 46-77 (225)
88 3as5_A MAMA; tetratricopeptide 58.5 15 0.00053 24.7 4.6 32 117-148 114-145 (186)
89 3ro2_A PINS homolog, G-protein 57.6 19 0.00066 26.6 5.3 33 114-146 6-38 (338)
90 3uq3_A Heat shock protein STI1 57.4 15 0.00052 26.4 4.6 35 114-148 80-114 (258)
91 2c2l_A CHIP, carboxy terminus 55.0 15 0.00052 28.9 4.6 31 118-148 43-73 (281)
92 4eqf_A PEX5-related protein; a 54.5 14 0.00048 28.9 4.2 26 119-144 71-96 (365)
93 2r5s_A Uncharacterized protein 54.5 8.8 0.0003 27.4 2.9 31 116-146 43-73 (176)
94 2vq2_A PILW, putative fimbrial 53.8 19 0.00066 25.2 4.6 25 117-141 80-105 (225)
95 3ro3_A PINS homolog, G-protein 53.8 9.6 0.00033 25.0 2.8 25 118-142 94-118 (164)
96 3as5_A MAMA; tetratricopeptide 53.5 21 0.00072 24.0 4.6 27 118-144 47-73 (186)
97 2q7f_A YRRB protein; TPR, prot 53.1 19 0.00065 25.8 4.5 32 117-148 163-194 (243)
98 1hh8_A P67PHOX, NCF-2, neutrop 53.0 20 0.00067 25.6 4.6 31 116-146 40-70 (213)
99 3t5x_A PCI domain-containing p 52.7 9.5 0.00033 30.3 3.0 29 118-146 19-47 (203)
100 2gw1_A Mitochondrial precursor 52.7 20 0.00068 28.9 5.0 37 117-153 453-489 (514)
101 4a1s_A PINS, partner of inscut 52.5 25 0.00085 27.8 5.5 31 116-146 51-81 (411)
102 1xnf_A Lipoprotein NLPI; TPR, 52.0 18 0.0006 26.5 4.2 28 118-145 82-109 (275)
103 2ho1_A Type 4 fimbrial biogene 51.8 22 0.00075 25.9 4.7 33 117-149 75-107 (252)
104 1hh8_A P67PHOX, NCF-2, neutrop 50.4 14 0.00049 26.4 3.5 30 117-146 125-154 (213)
105 1ihg_A Cyclophilin 40; ppiase 50.2 20 0.00067 30.0 4.8 38 117-154 311-348 (370)
106 3edt_B KLC 2, kinesin light ch 49.6 22 0.00076 25.7 4.4 27 117-143 47-73 (283)
107 3hym_B Cell division cycle pro 49.5 14 0.00047 27.8 3.4 28 119-146 276-303 (330)
108 1qqe_A Vesicular transport pro 49.4 22 0.00076 27.7 4.7 29 117-145 81-109 (292)
109 4b4t_Q 26S proteasome regulato 48.8 10 0.00036 30.3 2.7 29 116-144 7-35 (434)
110 1p5q_A FKBP52, FK506-binding p 48.6 22 0.00075 28.9 4.7 33 117-149 234-266 (336)
111 4g1t_A Interferon-induced prot 48.6 24 0.00083 28.5 4.9 32 118-149 339-370 (472)
112 3nf1_A KLC 1, kinesin light ch 48.5 12 0.0004 27.9 2.8 30 116-145 281-310 (311)
113 2if4_A ATFKBP42; FKBP-like, al 48.5 20 0.00067 29.2 4.4 43 105-147 171-213 (338)
114 3bee_A Putative YFRE protein; 48.3 30 0.001 23.5 4.7 30 117-146 10-42 (93)
115 2q7f_A YRRB protein; TPR, prot 48.2 26 0.00089 25.1 4.6 27 119-145 131-157 (243)
116 1ihg_A Cyclophilin 40; ppiase 48.2 19 0.00064 30.2 4.3 42 104-145 214-255 (370)
117 3ro3_A PINS homolog, G-protein 48.1 9.7 0.00033 24.9 2.1 27 120-146 56-82 (164)
118 2v5f_A Prolyl 4-hydroxylase su 47.6 28 0.00097 23.3 4.5 35 117-151 50-84 (104)
119 3u4t_A TPR repeat-containing p 47.4 23 0.00078 26.1 4.2 28 118-145 79-106 (272)
120 1qqe_A Vesicular transport pro 47.4 16 0.00055 28.6 3.6 31 117-147 162-192 (292)
121 4eqf_A PEX5-related protein; a 46.8 25 0.00084 27.4 4.6 28 118-145 252-279 (365)
122 1kt0_A FKBP51, 51 kDa FK506-bi 46.1 30 0.001 29.5 5.3 40 107-146 262-301 (457)
123 1fch_A Peroxisomal targeting s 46.0 25 0.00086 27.1 4.4 31 118-148 103-133 (368)
124 2ho1_A Type 4 fimbrial biogene 45.8 30 0.001 25.2 4.6 34 117-150 179-212 (252)
125 1xnf_A Lipoprotein NLPI; TPR, 45.5 29 0.001 25.3 4.6 33 116-148 46-78 (275)
126 3ly7_A Transcriptional activat 45.4 25 0.00087 31.0 4.9 36 115-150 312-347 (372)
127 3gw4_A Uncharacterized protein 44.3 37 0.0013 23.6 4.8 27 116-142 69-95 (203)
128 3edt_B KLC 2, kinesin light ch 44.3 30 0.001 25.0 4.4 29 115-143 87-115 (283)
129 1fch_A Peroxisomal targeting s 44.0 30 0.001 26.7 4.6 34 117-150 136-169 (368)
130 1p5q_A FKBP52, FK506-binding p 43.8 37 0.0013 27.5 5.4 36 111-146 145-180 (336)
131 3nf1_A KLC 1, kinesin light ch 43.8 28 0.00095 25.8 4.2 28 116-143 114-141 (311)
132 3cv0_A Peroxisome targeting si 43.2 32 0.0011 25.6 4.6 34 117-150 59-92 (327)
133 3txn_A 26S proteasome regulato 43.2 31 0.0011 30.4 5.1 43 111-153 94-142 (394)
134 3sf4_A G-protein-signaling mod 42.8 34 0.0012 26.4 4.8 31 116-146 12-42 (406)
135 1w3b_A UDP-N-acetylglucosamine 42.7 16 0.00056 28.8 3.0 32 117-148 37-68 (388)
136 4abn_A Tetratricopeptide repea 42.6 23 0.0008 30.2 4.1 30 117-146 141-170 (474)
137 2y4t_A DNAJ homolog subfamily 42.1 31 0.0011 27.5 4.6 31 117-147 64-94 (450)
138 2hr2_A Hypothetical protein; a 41.4 22 0.00074 27.6 3.4 38 108-145 97-134 (159)
139 3gw4_A Uncharacterized protein 41.2 30 0.001 24.1 3.9 29 116-144 29-57 (203)
140 2ifu_A Gamma-SNAP; membrane fu 40.6 12 0.00042 29.5 1.9 27 118-144 160-186 (307)
141 1o4v_A Phosphoribosylaminoimid 40.5 30 0.001 28.1 4.2 20 71-90 142-161 (183)
142 3hym_B Cell division cycle pro 40.5 34 0.0012 25.6 4.3 28 119-146 165-192 (330)
143 3cv0_A Peroxisome targeting si 40.4 38 0.0013 25.3 4.6 28 118-145 211-238 (327)
144 2y4t_A DNAJ homolog subfamily 39.2 37 0.0013 27.0 4.6 35 117-151 215-249 (450)
145 2ifu_A Gamma-SNAP; membrane fu 38.8 44 0.0015 26.2 4.9 26 118-143 81-106 (307)
146 1w3b_A UDP-N-acetylglucosamine 38.7 34 0.0012 27.0 4.2 28 118-145 276-303 (388)
147 1rh5_B Preprotein translocase 38.5 22 0.00074 24.9 2.7 24 44-67 34-57 (74)
148 3ro2_A PINS homolog, G-protein 38.4 21 0.00071 26.4 2.8 30 116-145 266-295 (338)
149 2xpi_A Anaphase-promoting comp 38.1 42 0.0015 27.9 4.9 29 117-145 520-548 (597)
150 2ond_A Cleavage stimulation fa 36.5 93 0.0032 24.2 6.5 47 102-148 46-100 (308)
151 1afo_A Glycophorin A; integral 36.3 30 0.001 21.8 2.8 21 45-65 13-34 (40)
152 2if4_A ATFKBP42; FKBP-like, al 36.0 42 0.0014 27.2 4.5 30 117-146 234-263 (338)
153 4abn_A Tetratricopeptide repea 35.2 35 0.0012 29.1 4.1 31 117-147 262-292 (474)
154 2jpu_A ORF C02003 protein; sol 34.7 26 0.0009 26.8 2.8 25 117-141 11-35 (129)
155 4b4t_R RPN7, 26S proteasome re 34.0 25 0.00084 30.4 2.9 38 117-154 135-172 (429)
156 3mkr_A Coatomer subunit epsilo 33.6 82 0.0028 24.8 5.8 29 118-146 205-233 (291)
157 4b4k_A N5-carboxyaminoimidazol 33.4 55 0.0019 26.5 4.7 19 72-90 154-172 (181)
158 3mp7_B Preprotein translocase 33.4 30 0.001 23.2 2.7 24 44-67 30-53 (61)
159 3q15_A PSP28, response regulat 33.2 40 0.0014 26.9 3.9 28 117-144 186-213 (378)
160 3qww_A SET and MYND domain-con 32.6 29 0.001 30.4 3.2 34 118-161 345-378 (433)
161 2c2l_A CHIP, carboxy terminus 32.1 46 0.0016 26.0 4.0 30 117-146 76-105 (281)
162 1wao_1 Serine/threonine protei 32.1 37 0.0012 29.3 3.7 34 117-150 78-111 (477)
163 1kt0_A FKBP51, 51 kDa FK506-bi 32.0 38 0.0013 28.8 3.8 30 118-147 356-385 (457)
164 2vsy_A XCC0866; transferase, g 31.9 51 0.0018 28.2 4.6 28 118-145 96-123 (568)
165 4gyw_A UDP-N-acetylglucosamine 31.9 44 0.0015 31.2 4.4 33 117-149 47-79 (723)
166 2vsy_A XCC0866; transferase, g 31.3 53 0.0018 28.1 4.6 28 118-145 62-89 (568)
167 1ouv_A Conserved hypothetical 31.3 64 0.0022 24.1 4.6 26 117-142 42-71 (273)
168 4grd_A N5-CAIR mutase, phospho 31.2 81 0.0028 25.4 5.3 19 72-90 144-162 (173)
169 2v5f_A Prolyl 4-hydroxylase su 31.0 42 0.0014 22.5 3.2 30 116-145 8-37 (104)
170 2rpa_A Katanin P60 ATPase-cont 30.6 49 0.0017 23.2 3.5 28 113-140 12-39 (78)
171 2ww9_B Protein transport prote 30.5 34 0.0012 24.3 2.7 24 44-67 47-70 (80)
172 4a1s_A PINS, partner of inscut 29.4 52 0.0018 25.9 3.9 30 118-147 348-377 (411)
173 4gyw_A UDP-N-acetylglucosamine 29.1 58 0.002 30.3 4.7 34 117-150 81-114 (723)
174 3qwp_A SET and MYND domain-con 29.0 32 0.0011 29.8 2.8 36 118-163 334-369 (429)
175 3mkr_A Coatomer subunit epsilo 28.5 66 0.0023 25.4 4.4 23 127-149 180-202 (291)
176 3qe9_Y Exonuclease 1; exonucle 27.7 66 0.0023 27.7 4.5 24 120-143 103-126 (352)
177 1zu2_A Mitochondrial import re 27.5 36 0.0012 26.3 2.6 40 102-148 32-81 (158)
178 3b9w_A Ammonium transporter fa 27.5 31 0.0011 30.9 2.5 22 44-65 208-229 (407)
179 2ond_A Cleavage stimulation fa 26.9 61 0.0021 25.2 3.9 27 117-143 207-233 (308)
180 2l34_A TYRO protein tyrosine k 26.4 38 0.0013 20.2 2.0 26 42-67 3-29 (33)
181 4b4t_S RPN3, 26S proteasome re 26.4 45 0.0015 30.9 3.4 44 117-160 274-321 (523)
182 2crb_A Nuclear receptor bindin 26.2 71 0.0024 23.6 3.8 33 118-150 20-59 (97)
183 1xmp_A PURE, phosphoribosylami 26.0 69 0.0024 25.7 4.0 20 71-90 142-161 (170)
184 3n71_A Histone lysine methyltr 26.0 49 0.0017 29.4 3.5 41 118-168 356-396 (490)
185 3ulq_A Response regulator aspa 25.7 32 0.0011 27.4 2.1 30 116-145 187-216 (383)
186 1zbp_A Hypothetical protein VP 25.6 1E+02 0.0034 26.3 5.2 50 102-158 27-76 (273)
187 1hz4_A MALT regulatory protein 25.1 65 0.0022 25.2 3.7 29 117-145 139-167 (373)
188 2pzi_A Probable serine/threoni 25.1 57 0.0019 29.4 3.8 28 118-145 472-499 (681)
189 2l2t_A Receptor tyrosine-prote 24.9 45 0.0015 21.2 2.2 10 55-64 20-29 (44)
190 4g1t_A Interferon-induced prot 24.3 86 0.0029 25.2 4.4 34 117-150 251-284 (472)
191 1atx_A ATX IA; SEA anemone tox 24.3 28 0.00095 22.6 1.1 21 1-21 24-44 (46)
192 3u3w_A Transcriptional activat 24.1 37 0.0013 26.2 2.1 30 117-146 200-229 (293)
193 3ors_A N5-carboxyaminoimidazol 23.7 58 0.002 25.9 3.2 20 71-90 134-153 (163)
194 2wwb_B SEC61gamma, protein tra 23.6 30 0.001 23.8 1.3 24 44-67 33-56 (68)
195 3sf4_A G-protein-signaling mod 23.5 1.2E+02 0.0043 23.2 5.0 28 117-144 271-298 (406)
196 3tek_A Thermodbp-single strand 23.1 67 0.0023 25.1 3.3 50 27-83 40-91 (148)
197 1wao_1 Serine/threonine protei 23.1 86 0.003 27.0 4.4 32 117-148 44-75 (477)
198 3q15_A PSP28, response regulat 23.1 1.5E+02 0.0053 23.4 5.7 29 117-145 265-293 (378)
199 2k1k_A Ephrin type-A receptor 23.0 50 0.0017 20.1 2.1 25 48-72 13-38 (38)
200 1u11_A PURE (N5-carboxyaminoim 22.9 82 0.0028 25.5 3.9 20 71-90 152-171 (182)
201 3oow_A Phosphoribosylaminoimid 22.7 45 0.0015 26.6 2.4 20 71-90 136-155 (166)
202 3ldt_A Outer membrane protein, 22.5 9.1 0.00031 29.5 -1.8 24 45-70 4-27 (169)
203 3t5v_B Nuclear mRNA export pro 22.3 38 0.0013 30.5 2.0 29 118-146 225-254 (455)
204 2qfc_A PLCR protein; TPR, HTH, 22.2 65 0.0022 24.8 3.2 29 117-145 200-228 (293)
205 3rg8_A Phosphoribosylaminoimid 22.2 75 0.0026 25.1 3.5 20 71-90 129-148 (159)
206 3u3w_A Transcriptional activat 22.2 1.1E+02 0.0038 23.5 4.5 25 117-141 119-143 (293)
207 2kse_A Sensor protein QSEC; me 22.1 72 0.0025 22.4 3.2 29 57-85 25-53 (186)
208 2h6f_A Protein farnesyltransfe 22.0 1.6E+02 0.0055 24.7 5.8 35 117-151 135-170 (382)
209 3ulq_A Response regulator aspa 22.0 97 0.0033 24.5 4.2 25 119-143 109-133 (383)
210 3rjv_A Putative SEL1 repeat pr 22.0 1.1E+02 0.0039 22.5 4.4 14 128-141 68-81 (212)
211 2ooe_A Cleavage stimulation fa 21.8 90 0.0031 26.3 4.2 30 118-147 51-80 (530)
212 1q90_R Cytochrome B6-F complex 21.8 60 0.0021 21.0 2.4 22 46-67 17-38 (49)
213 1zu2_A Mitochondrial import re 21.8 40 0.0014 26.0 1.9 30 118-147 85-125 (158)
214 2h31_A Multifunctional protein 21.5 19 0.00066 32.5 -0.0 20 71-90 392-411 (425)
215 3trh_A Phosphoribosylaminoimid 21.4 59 0.002 26.0 2.8 19 72-90 138-156 (169)
216 3kuu_A Phosphoribosylaminoimid 21.3 59 0.002 26.2 2.8 20 71-90 143-162 (174)
217 2klu_A T-cell surface glycopro 21.2 82 0.0028 22.0 3.1 15 58-72 21-35 (70)
218 2l8s_A Integrin alpha-1; trans 21.1 80 0.0027 20.9 2.9 16 59-74 24-43 (54)
219 2pzi_A Probable serine/threoni 20.8 82 0.0028 28.4 3.9 34 117-150 437-470 (681)
220 2ipb_A PHON protein, class A n 20.2 1.1E+02 0.0038 24.1 4.2 17 72-88 197-213 (230)
221 4f3v_A ESX-1 secretion system 20.0 1.2E+02 0.0041 25.3 4.6 29 117-145 212-240 (282)
222 2ywx_A Phosphoribosylaminoimid 20.0 73 0.0025 25.2 3.0 20 71-90 124-143 (157)
No 1
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=100.00 E-value=8.5e-34 Score=203.54 Aligned_cols=72 Identities=65% Similarity=1.003 Sum_probs=68.9
Q ss_pred CCCCCCCChHHHHHHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHhhcCCHHHHHHHHHhc
Q psy14697 98 RGIPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKL 169 (175)
Q Consensus 98 ~~~p~~~d~e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQqTLPp~Vf~~Li~kL 169 (175)
+.+|+|+|+|++|+||++||++||+|+++|++++|+.||||||+|||||++||+|||+||||+||++|++||
T Consensus 2 ~~~p~~~d~e~~e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q~tlP~~vf~~Li~kl 73 (73)
T 3ax2_A 2 PLGSDLKDAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKL 73 (73)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHSCHHHHHHHHHHC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhhCCHHHHHHHHHhC
Confidence 457899999999999999999999999999999999999999999999999999999999999999999986
No 2
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=99.98 E-value=2.7e-33 Score=209.75 Aligned_cols=78 Identities=63% Similarity=1.029 Sum_probs=74.9
Q ss_pred hcCCCCCCCChHHHHHHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHhhcCCHHHHHHHHHhcCCCC
Q psy14697 96 NKRGIPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEKLPPAG 173 (175)
Q Consensus 96 ~~~~~p~~~d~e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQqTLPp~Vf~~Li~kLp~~~ 173 (175)
+.+++|+|+|++++|+||++||++||.|+++|++++|+.||||||+|||||++||+|||+||||+||++|+++||+++
T Consensus 3 ~~~~~p~~~d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~q~TlP~~Vf~~Li~~l~~~~ 80 (95)
T 1om2_A 3 GLSKLPDLKDAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQMLLTKLPTIS 80 (95)
T ss_dssp CCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCCHHHHHHHHHSCSHH
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Confidence 456799999999999999999999999999999999999999999999999999999999999999999999999763
No 3
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=89.87 E-value=0.74 Score=32.17 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=23.7
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
+-.+|..+..+|++++|+.+|-+||.+.|+-..
T Consensus 11 ~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~ 43 (127)
T 4gcn_A 11 EKDLGNAAYKQKDFEKAHVHYDKAIELDPSNIT 43 (127)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 345777777777777788888788777766443
No 4
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=89.77 E-value=0.78 Score=32.20 Aligned_cols=27 Identities=19% Similarity=0.321 Sum_probs=13.9
Q ss_pred hHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 119 LGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 119 lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
+|..+..+|++++|+.+|-+||...|+
T Consensus 19 ~G~~~~~~g~~~~A~~~~~~al~~~p~ 45 (126)
T 4gco_A 19 KGNEYFKKGDYPTAMRHYNEAVKRDPE 45 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 455555555555555555555555443
No 5
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=88.91 E-value=0.73 Score=34.21 Aligned_cols=31 Identities=10% Similarity=0.057 Sum_probs=27.2
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
..+|..+...|++++|..+|-+|+...|++.
T Consensus 108 ~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 108 FHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 4689999999999999999999999998875
No 6
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=86.51 E-value=0.51 Score=30.43 Aligned_cols=35 Identities=14% Similarity=0.246 Sum_probs=28.3
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL 150 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL 150 (175)
...+|..+...|++++|..+|-+|+...|+-.+..
T Consensus 38 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 38 YYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 34578888888999999999999999988776655
No 7
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=85.87 E-value=1.2 Score=31.23 Aligned_cols=39 Identities=15% Similarity=0.151 Sum_probs=27.7
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHhh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQ 155 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQq 155 (175)
..+|..+...|++++|..+|-+||.+.|+=.+...-+.+
T Consensus 85 ~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~ 123 (126)
T 4gco_A 85 IRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRN 123 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHH
Confidence 456777777778888888888888877776666555443
No 8
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=85.70 E-value=1.2 Score=31.10 Aligned_cols=33 Identities=18% Similarity=0.323 Sum_probs=29.3
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQL 149 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~L 149 (175)
..+|..+...|++++|+.+|-+||.+.|+|..+
T Consensus 87 ~~lg~~~~~~~~~~~A~~~~~kal~~~~~~~~~ 119 (127)
T 4gcn_A 87 SRAGNAFQKQNDLSLAVQWFHRSLSEFRDPELV 119 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSCCHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCcCHHHH
Confidence 468999999999999999999999999998543
No 9
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=85.68 E-value=0.77 Score=29.54 Aligned_cols=33 Identities=18% Similarity=0.325 Sum_probs=27.3
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
.+.+|..+...|++++|+..|-+|+...|+-..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~ 35 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKD 35 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHH
Confidence 467888888889999999999999988887555
No 10
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=85.45 E-value=1.2 Score=29.95 Aligned_cols=29 Identities=24% Similarity=0.303 Sum_probs=14.5
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
.+|..+...|++++|+.+|-+|+...|+-
T Consensus 32 ~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 60 (117)
T 3k9i_A 32 GLGSTFRTLGEYRKAEAVLANGVKQFPNH 60 (117)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 44445555555555555555555554443
No 11
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=85.08 E-value=1.4 Score=28.19 Aligned_cols=30 Identities=10% Similarity=0.196 Sum_probs=22.3
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
..+|..+...|++++|..+|-+|+...|+-
T Consensus 42 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 42 SNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 356777777777878888888888777764
No 12
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=84.65 E-value=1.1 Score=31.78 Aligned_cols=30 Identities=17% Similarity=0.314 Sum_probs=19.2
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
.+|+.+..+|++++|..+|-+||...|+=.
T Consensus 10 ~lG~~~~~~g~~~~A~~~~~~al~~~p~~~ 39 (184)
T 3vtx_A 10 DIGDKKRTKGDFDGAIRAYKKVLKADPNNV 39 (184)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 466666666666666666666666665433
No 13
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=84.27 E-value=1.4 Score=31.58 Aligned_cols=30 Identities=23% Similarity=0.285 Sum_probs=26.5
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
..+|..+...|++++|..+|-+|+.+.|+.
T Consensus 93 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 122 (148)
T 2vgx_A 93 FHAAECLLQXGELAEAESGLFLAQELIANX 122 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 567999999999999999999999998863
No 14
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=83.91 E-value=1.8 Score=31.15 Aligned_cols=31 Identities=23% Similarity=0.160 Sum_probs=28.1
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
..+|..+...|++++|..+|-+++...|++.
T Consensus 112 ~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 142 (176)
T 2r5s_A 112 CELAVQYNQVGRDEEALELLWNILKVNLGAQ 142 (176)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCTTTT
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHhCcccC
Confidence 5689999999999999999999999998863
No 15
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=83.43 E-value=3.7 Score=27.86 Aligned_cols=32 Identities=6% Similarity=-0.079 Sum_probs=23.2
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|..+|-+|+...|+-.+
T Consensus 51 ~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 82 (166)
T 1a17_A 51 GNRSLAYLRTECYGYALGDATRAIELDKKYIK 82 (166)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCcccHH
Confidence 34667777778888888888888888775433
No 16
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=83.23 E-value=2 Score=26.49 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=29.0
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL 150 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL 150 (175)
..+|..+...|++++|..+|-+|+...|+-.+.+
T Consensus 47 ~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 80 (91)
T 1na3_A 47 YNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAK 80 (91)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHH
Confidence 4689999999999999999999999988755444
No 17
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=83.16 E-value=1.8 Score=29.01 Aligned_cols=32 Identities=6% Similarity=-0.039 Sum_probs=22.6
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|..+|-+|+.+.|+-.+
T Consensus 42 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~ 73 (126)
T 3upv_A 42 SNRAAALAKLMSFPEAIADCNKAIEKDPNFVR 73 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHH
Confidence 34677777777777788888888877766433
No 18
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=82.77 E-value=2.2 Score=26.35 Aligned_cols=32 Identities=25% Similarity=0.402 Sum_probs=27.7
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|..+|-+|+...|+..+
T Consensus 13 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 44 (91)
T 1na3_A 13 YNLGNAYYKQGDYDEAIEYYQKALELDPNNAE 44 (91)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhcCCCCHH
Confidence 46788999999999999999999999886544
No 19
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=82.43 E-value=2 Score=28.76 Aligned_cols=39 Identities=15% Similarity=0.168 Sum_probs=32.6
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhc------CChHHHHHHHhh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVC------GQPNQLLGVLQQ 155 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vc------pqP~~LL~IyQq 155 (175)
..+|..+...|++++|..+|-+|+... |+-.+++..+.+
T Consensus 76 ~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~ 120 (126)
T 3upv_A 76 IRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYK 120 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHH
Confidence 568999999999999999999999999 766666655543
No 20
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=81.29 E-value=3.8 Score=28.42 Aligned_cols=32 Identities=9% Similarity=0.108 Sum_probs=22.7
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|+.+|-+|+...|+-.+
T Consensus 56 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 87 (142)
T 2xcb_A 56 LGLGACRQSLGLYEQALQSYSYGALMDINEPR 87 (142)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcH
Confidence 35677777777777777788887777765433
No 21
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.07 E-value=2.3 Score=28.33 Aligned_cols=38 Identities=18% Similarity=0.250 Sum_probs=29.1
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQ 154 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQ 154 (175)
..+|..+...|++++|..+|-+|+...|+-.++...+.
T Consensus 103 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 140 (148)
T 2dba_A 103 YRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALR 140 (148)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence 35788888888888999999999988887665554443
No 22
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=80.99 E-value=2.8 Score=27.67 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=24.7
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL 150 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL 150 (175)
..+|..+...|++++|..+|-+++..+|+.....
T Consensus 80 ~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~ 113 (129)
T 2xev_A 80 LKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAAR 113 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHH
Confidence 3567777777888888888888888887765443
No 23
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.68 E-value=2.4 Score=28.23 Aligned_cols=28 Identities=21% Similarity=0.373 Sum_probs=13.7
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
.+|..+...|++++|+.+|.+|+...|+
T Consensus 33 ~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 60 (148)
T 2dba_A 33 KEGNELFKCGDYGGALAAYTQALGLDAT 60 (148)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHccc
Confidence 3444444445555555555555554444
No 24
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=80.29 E-value=2.9 Score=26.35 Aligned_cols=31 Identities=10% Similarity=0.057 Sum_probs=22.5
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
..+|..+...|++++|...|-+|+...|.-.
T Consensus 42 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~ 72 (118)
T 1elw_A 42 SNRSAAYAKKGDYQKAYEDGCKTVDLKPDWG 72 (118)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHhCcccH
Confidence 4456677777888888888888888877533
No 25
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=80.23 E-value=2.8 Score=26.77 Aligned_cols=34 Identities=18% Similarity=0.141 Sum_probs=28.6
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL 150 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL 150 (175)
..+|..+...|++++|+.+|-+|+...|+-...+
T Consensus 8 ~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 41 (111)
T 2l6j_A 8 KEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGY 41 (111)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHH
Confidence 5689999999999999999999999998655443
No 26
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=79.97 E-value=3.1 Score=26.76 Aligned_cols=33 Identities=9% Similarity=0.284 Sum_probs=28.9
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
...+|..+...|++++|..+|-+|+...|+|..
T Consensus 82 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 114 (131)
T 1elr_A 82 YARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDV 114 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHhCCCHHH
Confidence 357899999999999999999999999997643
No 27
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=79.80 E-value=3 Score=26.28 Aligned_cols=38 Identities=16% Similarity=0.073 Sum_probs=31.8
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQ 154 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQ 154 (175)
..+|..+...|++++|..+|-+|+...|+..+....+.
T Consensus 76 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 113 (118)
T 1elw_A 76 SRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQ 113 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 56888899999999999999999999998766655443
No 28
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=79.16 E-value=2.6 Score=27.90 Aligned_cols=27 Identities=19% Similarity=0.343 Sum_probs=15.0
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcC
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCG 144 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcp 144 (175)
.+|..+...|++++|..+|-+|+...+
T Consensus 46 ~lg~~~~~~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 46 HLGKLYERLDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhhh
Confidence 345555555555555555555555543
No 29
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=79.09 E-value=3.3 Score=25.90 Aligned_cols=29 Identities=14% Similarity=0.260 Sum_probs=26.8
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
..+|..+...|++++|..+|-+|+...|+
T Consensus 44 ~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 44 LMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 57899999999999999999999999987
No 30
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=78.66 E-value=5.7 Score=25.35 Aligned_cols=31 Identities=10% Similarity=0.100 Sum_probs=22.2
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
..+|..+...|++++|...|-+|+...|...
T Consensus 50 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~ 80 (131)
T 2vyi_A 50 CNRAAAYSKLGNYAGAVQDCERAICIDPAYS 80 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHhhchHHHHHHHHHHHhcCccCH
Confidence 4567777777777788888888887776643
No 31
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=78.25 E-value=3.3 Score=27.55 Aligned_cols=30 Identities=17% Similarity=0.163 Sum_probs=19.4
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
..+|..+...|++++|..+|-+|+...|+-
T Consensus 47 ~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 76 (137)
T 3q49_B 47 TNRALCYLKMQQPEQALADCRRALELDGQS 76 (137)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCchh
Confidence 345666666667777777777777766653
No 32
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=78.10 E-value=3.2 Score=28.63 Aligned_cols=32 Identities=16% Similarity=-0.027 Sum_probs=24.0
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|+.+|-+|+..-|+-.+
T Consensus 55 ~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~ 86 (121)
T 1hxi_A 55 RSLGLTQAENEKDGLAIIALNHARMLDPKDIA 86 (121)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 45777888788888888888888888775443
No 33
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=77.96 E-value=5.4 Score=29.29 Aligned_cols=44 Identities=16% Similarity=0.270 Sum_probs=35.8
Q ss_pred CCCChHHHHHHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 102 DLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 102 ~~~d~e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
+|.++......-.-...+|..+...|++++|..+|-+||...|+
T Consensus 106 ~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 106 VPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCH
T ss_pred CCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 35666655555556678999999999999999999999999776
No 34
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=77.90 E-value=1.7 Score=30.34 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=29.5
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLG 151 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~ 151 (175)
..+|..+...|++++|..+|-+|+...|+..+...
T Consensus 90 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 124 (142)
T 2xcb_A 90 FHAAECHLQLGDLDGAESGFYSARALAAAQPAHEA 124 (142)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHH
Confidence 56899999999999999999999999986544433
No 35
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=77.85 E-value=3.1 Score=27.02 Aligned_cols=36 Identities=14% Similarity=0.095 Sum_probs=28.4
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGV 152 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~I 152 (175)
..+|..+...|++++|..+|-+|+...|+-.+....
T Consensus 88 ~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~ 123 (133)
T 2lni_A 88 TRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADG 123 (133)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHH
Confidence 467888888899999999999999988876554443
No 36
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=77.76 E-value=3.2 Score=29.26 Aligned_cols=30 Identities=17% Similarity=0.078 Sum_probs=20.5
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
..+|..+...|++++|+.+|-+||...|+-
T Consensus 49 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 78 (164)
T 3sz7_A 49 SNRAAAYSASGQHEKAAEDAELATVVDPKY 78 (164)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence 345666667777777777777777776653
No 37
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=77.68 E-value=2.2 Score=28.68 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=30.9
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLG 151 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~ 151 (175)
..+|..+...|++++|..+|-+|+...|+..++..
T Consensus 65 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 99 (117)
T 3k9i_A 65 VFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQS 99 (117)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 45899999999999999999999999998877653
No 38
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=77.68 E-value=5.2 Score=31.65 Aligned_cols=39 Identities=21% Similarity=0.179 Sum_probs=32.3
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCCh------HHHHHHHhh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQP------NQLLGVLQQ 155 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP------~~LL~IyQq 155 (175)
..+|..+...|++++|..+|-+++..-|+. ..|..+|+.
T Consensus 223 ~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~ 267 (287)
T 3qou_A 223 TQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAA 267 (287)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHH
Confidence 578999999999999999999999999886 335555554
No 39
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=77.60 E-value=4.7 Score=29.32 Aligned_cols=42 Identities=10% Similarity=0.143 Sum_probs=34.3
Q ss_pred ChHHHHHHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 105 DHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 105 d~e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
+.++..+.-..-..+|..+..+|++++|+..|-+|+..+|+-
T Consensus 30 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~ 71 (198)
T 2fbn_A 30 TDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHT 71 (198)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc
Confidence 445555556666789999999999999999999999988763
No 40
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=77.56 E-value=3.8 Score=26.29 Aligned_cols=27 Identities=19% Similarity=0.224 Sum_probs=16.0
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcC
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCG 144 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcp 144 (175)
.+|..+...|++++|..+|-+|+...|
T Consensus 43 ~la~~~~~~~~~~~A~~~~~~~~~~~~ 69 (131)
T 1elr_A 43 NQAAVYFEKGDYNKCRELCEKAIEVGR 69 (131)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhcc
Confidence 445555556666666666666666544
No 41
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=77.40 E-value=3.9 Score=27.77 Aligned_cols=34 Identities=9% Similarity=0.135 Sum_probs=30.1
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL 150 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL 150 (175)
..+|..+...|++++|..+|-+|+...|+..+..
T Consensus 85 ~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~ 118 (166)
T 1a17_A 85 YRRAASNMALGKFRAALRDYETVVKVKPHDKDAK 118 (166)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHH
Confidence 5789999999999999999999999999876654
No 42
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=77.36 E-value=3.9 Score=26.88 Aligned_cols=30 Identities=13% Similarity=0.187 Sum_probs=27.4
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
..+|+.+...|++++|+.+|-+++..+|+.
T Consensus 43 ~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~ 72 (129)
T 2xev_A 43 YWLGESYYATRNFQLAEAQFRDLVSRYPTH 72 (129)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHCCCC
Confidence 458999999999999999999999999985
No 43
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=76.45 E-value=4 Score=29.58 Aligned_cols=25 Identities=20% Similarity=0.157 Sum_probs=12.8
Q ss_pred hHhHHhhcCChhhHHHHHHHHHHhc
Q psy14697 119 LGETLLAAGDLDNGVEHLANALTVC 143 (175)
Q Consensus 119 lGE~L~a~G~~~eaa~hf~nAl~Vc 143 (175)
+|..+...|++++|..+|-+|+...
T Consensus 213 l~~~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 213 KATAQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 4444444555555555555555555
No 44
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=75.55 E-value=4 Score=25.49 Aligned_cols=33 Identities=12% Similarity=0.218 Sum_probs=27.4
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQL 149 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~L 149 (175)
..+|..+...|++++|..+|-+|+...|...+.
T Consensus 10 ~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 42 (112)
T 2kck_A 10 YLEGVLQYDAGNYTESIDLFEKAIQLDPEESKY 42 (112)
T ss_dssp GGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHH
Confidence 357888888999999999999999998875543
No 45
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=75.06 E-value=3 Score=27.13 Aligned_cols=28 Identities=0% Similarity=-0.026 Sum_probs=16.8
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
.+|..+...|++++|...|-+|+...|+
T Consensus 55 ~la~~~~~~~~~~~A~~~~~~a~~~~~~ 82 (133)
T 2lni_A 55 NRAACYTKLLEFQLALKDCEECIQLEPT 82 (133)
T ss_dssp HHHHHHTTTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 4455555566666666666666666554
No 46
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=74.46 E-value=5.4 Score=25.43 Aligned_cols=34 Identities=15% Similarity=0.073 Sum_probs=29.3
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL 150 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL 150 (175)
..+|..+...|++++|..+|-+|+...|+-....
T Consensus 84 ~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 117 (131)
T 2vyi_A 84 GRMGLALSSLNKHVEAVAYYKKALELDPDNETYK 117 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHH
Confidence 6789999999999999999999999988655443
No 47
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=74.28 E-value=7.3 Score=27.62 Aligned_cols=32 Identities=16% Similarity=0.124 Sum_probs=24.2
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|..+|-+||...|+-.+
T Consensus 69 ~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~ 100 (150)
T 4ga2_A 69 RFLGLLYELEENTDKAVECYRRSVELNPTQKD 100 (150)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHcCchHHHHHHHHHHHHhCCCCHH
Confidence 45777888888888888888888888776433
No 48
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=74.24 E-value=5 Score=26.45 Aligned_cols=27 Identities=26% Similarity=0.345 Sum_probs=15.1
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcC
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCG 144 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcp 144 (175)
.+|+.+...|++++|..+|-+|+...|
T Consensus 58 ~la~~~~~~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 58 WLGKTLQGQGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 445555555555555555555555554
No 49
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=72.86 E-value=11 Score=28.05 Aligned_cols=28 Identities=11% Similarity=0.038 Sum_probs=15.9
Q ss_pred hHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 119 LGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 119 lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
+|..+...|++++|..+|-+||...|+-
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~ 87 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNN 87 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence 5555555555555555555555555543
No 50
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=72.44 E-value=6.3 Score=24.87 Aligned_cols=32 Identities=25% Similarity=0.402 Sum_probs=24.7
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|...|-+++...|+...
T Consensus 47 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 78 (125)
T 1na0_A 47 YNLGNAYYKQGDYDEAIEYYQKALELDPNNAE 78 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhCCccHH
Confidence 45677777888888888888888888775443
No 51
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=72.34 E-value=13 Score=25.46 Aligned_cols=65 Identities=9% Similarity=0.083 Sum_probs=43.9
Q ss_pred HhhhhheeccCCCCChhhHHHhHHHHHHhHHHHHHhhcCCCCCCCChHHHHHHHHHHHHhHhHHhhcCChhhHHHHHHHH
Q psy14697 60 VVGYCLYFDKKRRSDPLFKEKLKERRRKNRELLQQKNKRGIPDLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANA 139 (175)
Q Consensus 60 flGYcIYFD~KRR~dP~FRKkLrerRrk~~~~~~~a~~~~~p~~~d~e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nA 139 (175)
..|-+.||--.+.-.++-++-|++-.+ -||+++.+. +-+|.....+|++++|+.++-++
T Consensus 11 ~~a~al~~~~~~~~~~~A~~~l~~AL~--------------~dp~~~rA~-------~~lg~~~~~~g~y~~Ai~~w~~~ 69 (93)
T 3bee_A 11 AKATTLYYLHKQAMTDEVSLLLEQALQ--------------LEPYNEAAL-------SLIANDHFISFRFQEAIDTWVLL 69 (93)
T ss_dssp HHHHHHHHTTTTCCCHHHHHHHHHHHH--------------HCTTCHHHH-------HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHH--------------HCcCCHHHH-------HHHHHHHHHcCCHHHHHHHHHHH
Confidence 345666765555555665555543211 145665554 34599999999999999999999
Q ss_pred HHhcCC
Q psy14697 140 LTVCGQ 145 (175)
Q Consensus 140 l~Vcpq 145 (175)
+..-|.
T Consensus 70 l~~~p~ 75 (93)
T 3bee_A 70 LDSNDP 75 (93)
T ss_dssp HTCCCT
T ss_pred HhhCCC
Confidence 988777
No 52
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=72.31 E-value=9.1 Score=27.22 Aligned_cols=29 Identities=17% Similarity=0.182 Sum_probs=20.0
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
..+|..+...|++++|+.+|-+|+...|+
T Consensus 59 ~~lg~~~~~~g~~~~A~~~~~~al~l~p~ 87 (148)
T 2vgx_A 59 LGLGACRQAMGQYDLAIHSYSYGAVMDIX 87 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 34666667777777777777777777664
No 53
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=72.27 E-value=5.3 Score=28.38 Aligned_cols=33 Identities=9% Similarity=0.108 Sum_probs=28.7
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQL 149 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~L 149 (175)
..+|..+...|++++|..+|-+||.+-|+-.+.
T Consensus 35 ~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a 67 (150)
T 4ga2_A 35 FYFAKLYYEAKEYDLAKKYICTYINVQERDPKA 67 (150)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 468999999999999999999999998865443
No 54
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=71.26 E-value=4 Score=28.68 Aligned_cols=32 Identities=22% Similarity=0.246 Sum_probs=27.4
Q ss_pred HHHHHHhHhHHhhcCChhhHHHHHHHHHHhcC
Q psy14697 113 FLQEIQLGETLLAAGDLDNGVEHLANALTVCG 144 (175)
Q Consensus 113 Fl~eV~lGE~L~a~G~~~eaa~hf~nAl~Vcp 144 (175)
-..-..+|..+...|++++|+.+|.+||..++
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~ 42 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLD 42 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 34456789999999999999999999999843
No 55
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=71.21 E-value=12 Score=29.46 Aligned_cols=28 Identities=14% Similarity=0.236 Sum_probs=15.6
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcC
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCG 144 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcp 144 (175)
+.+|+.+..+|++++|..+|-+|+...|
T Consensus 121 ~~~a~~~~~~g~~~~A~~~~~~al~~~P 148 (287)
T 3qou_A 121 AQQAMQLMQESNYTDALPLLXDAWQLSN 148 (287)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHhCC
Confidence 4455555555555555555555555554
No 56
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=71.21 E-value=6.2 Score=27.67 Aligned_cols=31 Identities=23% Similarity=0.159 Sum_probs=27.2
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
..+|..+...|++++|..+|-+|+.+.|+-.
T Consensus 101 ~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 101 FRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 4578899999999999999999999988754
No 57
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=71.07 E-value=7.8 Score=28.80 Aligned_cols=33 Identities=9% Similarity=0.072 Sum_probs=29.1
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQL 149 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~L 149 (175)
..+|..+...|++++|..+|-+||..-|+-.+.
T Consensus 92 ~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a 124 (208)
T 3urz_A 92 EACAEMQVCRGQEKDALRMYEKILQLEADNLAA 124 (208)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Confidence 568999999999999999999999999875543
No 58
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=70.85 E-value=5.5 Score=28.94 Aligned_cols=38 Identities=18% Similarity=0.193 Sum_probs=29.0
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQ 154 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQ 154 (175)
..+|..+...|++++|..+|-+|+...|+..++...+.
T Consensus 126 ~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 163 (198)
T 2fbn_A 126 YKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYE 163 (198)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHH
Confidence 45788888888888888888888888887766554443
No 59
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=69.42 E-value=5.1 Score=28.27 Aligned_cols=36 Identities=6% Similarity=0.106 Sum_probs=28.5
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGV 152 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~I 152 (175)
..+|..+...|++++|..+|-+|+...|+..+...+
T Consensus 119 ~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 154 (177)
T 2e2e_A 119 MLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQL 154 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHH
Confidence 457888888899999999999999999876544333
No 60
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=69.27 E-value=3.1 Score=32.43 Aligned_cols=29 Identities=17% Similarity=0.320 Sum_probs=27.2
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
...|..+...|++++|+.+|-+||.+.|+
T Consensus 15 ~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~ 43 (159)
T 2hr2_A 15 LSDAQRQLVAGEYDEAAANCRRAMEISHT 43 (159)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhhCCC
Confidence 67899999999999999999999999998
No 61
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=69.05 E-value=4.4 Score=29.84 Aligned_cols=30 Identities=10% Similarity=0.131 Sum_probs=27.1
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
..+|..+...|++++|+.+|-+|+.+.|+-
T Consensus 74 ~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~ 103 (151)
T 3gyz_A 74 MGLAAIYQIKEQFQQAADLYAVAFALGKND 103 (151)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSSSC
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhhCCCC
Confidence 468999999999999999999999998863
No 62
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=68.80 E-value=7.1 Score=27.40 Aligned_cols=32 Identities=16% Similarity=0.231 Sum_probs=28.3
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|..+|-+|+...|+-.+
T Consensus 83 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 114 (164)
T 3sz7_A 83 SRLGLARFDMADYKGAKEAYEKGIEAEGNGGS 114 (164)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCchH
Confidence 56789999999999999999999999987655
No 63
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=68.60 E-value=8.3 Score=31.21 Aligned_cols=31 Identities=26% Similarity=0.322 Sum_probs=22.1
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
.+|+.+...|++++|..+|-+|+...|+-.+
T Consensus 44 ~la~~~~~~g~~~~A~~~~~~al~~~p~~~~ 74 (514)
T 2gw1_A 44 NLSACYVSVGDLKKVVEMSTKALELKPDYSK 74 (514)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCSCCHH
T ss_pred hHHHHHHHHhhHHHHHHHHHHHhccChHHHH
Confidence 3677777777777777777777777766543
No 64
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=68.19 E-value=9.2 Score=24.06 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=30.5
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVL 153 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~Iy 153 (175)
..+|..+...|++++|..+|-+++...|+..+.+..+
T Consensus 81 ~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 117 (125)
T 1na0_A 81 YNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNL 117 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 4678888899999999999999999988766655443
No 65
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=68.15 E-value=6.5 Score=29.10 Aligned_cols=42 Identities=12% Similarity=0.010 Sum_probs=34.6
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHhhcC
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTL 157 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQqTL 157 (175)
...+|..+...|++++|..+|-+|+.+.|+-.+..+.+.+..
T Consensus 224 ~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~ 265 (272)
T 3u4t_A 224 NEYIAYYYTINRDKVKADAAWKNILALDPTNKKAIDGLKMKL 265 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHC---
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCccHHHHHHHhhhhh
Confidence 345889999999999999999999999999888887776544
No 66
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=67.90 E-value=7.9 Score=26.57 Aligned_cols=30 Identities=13% Similarity=0.003 Sum_probs=15.9
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
..+|..+...|++++|..+|-+|+...|+-
T Consensus 89 ~~la~~~~~~g~~~~A~~~~~~al~~~P~~ 118 (121)
T 1hxi_A 89 AALAVSHTNEHNANAALASLRAWLLSQPQY 118 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCcCC
Confidence 345666666666666666666666665543
No 67
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=67.82 E-value=8.4 Score=25.49 Aligned_cols=29 Identities=21% Similarity=0.379 Sum_probs=25.9
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
..+|..+...|++++|..+|-+|+...|+
T Consensus 81 ~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 81 FFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 46888888999999999999999999887
No 68
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=67.74 E-value=7.7 Score=27.30 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=25.2
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|+.+|-+|+...|+-.+
T Consensus 111 ~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~ 142 (184)
T 3vtx_A 111 YKLGLVYDSMGEHDKAIEAYEKTISIKPGFIR 142 (184)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHhCCchhHHHHHHHHHHhcchhhh
Confidence 45788888888888888888888888776544
No 69
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=67.57 E-value=11 Score=28.38 Aligned_cols=31 Identities=0% Similarity=-0.063 Sum_probs=28.5
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
...+|+.+...|++++|+.+|-+++..+|+.
T Consensus 151 ~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 181 (261)
T 3qky_A 151 QYEAARLYERRELYEAAAVTYEAVFDAYPDT 181 (261)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHHCCCC
Confidence 3788999999999999999999999999973
No 70
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=67.14 E-value=11 Score=28.08 Aligned_cols=41 Identities=17% Similarity=0.082 Sum_probs=32.9
Q ss_pred CCCChHHHHHHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCChHHH
Q psy14697 102 DLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQL 149 (175)
Q Consensus 102 ~~~d~e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~L 149 (175)
+|.+++.. ..+|..+...|++++|..+|-+|+...|+-.+.
T Consensus 35 ~p~~~~a~-------~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a 75 (217)
T 2pl2_A 35 NPQDPEAL-------YWLARTQLKLGLVNPALENGKTLVARTPRYLGG 75 (217)
T ss_dssp SSSCHHHH-------HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CCCCHHHH-------HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH
Confidence 45666543 568999999999999999999999998875443
No 71
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=66.65 E-value=7.3 Score=29.15 Aligned_cols=32 Identities=16% Similarity=0.119 Sum_probs=28.8
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
+..+|+.+..+|++++|+..|-++|..+|+..
T Consensus 150 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~ 181 (225)
T 2yhc_A 150 EYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQ 181 (225)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCC
Confidence 36789999999999999999999999999854
No 72
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=65.81 E-value=12 Score=30.58 Aligned_cols=33 Identities=15% Similarity=0.275 Sum_probs=16.1
Q ss_pred HHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcC
Q psy14697 112 YFLQEIQLGETLLAAGDLDNGVEHLANALTVCG 144 (175)
Q Consensus 112 fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~Vcp 144 (175)
....-..+|..+..+|++++|+.+|-+|+...|
T Consensus 24 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p 56 (537)
T 3fp2_A 24 YAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDP 56 (537)
T ss_dssp HHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCC
Confidence 333344455555555555555555555555544
No 73
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=65.00 E-value=11 Score=23.75 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=26.7
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|..+|-+++...|+..+
T Consensus 73 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 104 (136)
T 2fo7_A 73 YNLGNAYYKQGDYDEAIEYYQKALELDPRSAE 104 (136)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCCChH
Confidence 35788888899999999999999999886544
No 74
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=64.42 E-value=7.8 Score=28.98 Aligned_cols=30 Identities=30% Similarity=0.391 Sum_probs=16.9
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
.+|..+...|++++|..+|-+|+...|+-.
T Consensus 156 ~la~~~~~~g~~~~A~~~~~~al~~~P~~~ 185 (217)
T 2pl2_A 156 ALAELYLSMGRLDEALAQYAKALEQAPKDL 185 (217)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 455555555555566666666665555443
No 75
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=63.72 E-value=10 Score=28.38 Aligned_cols=31 Identities=10% Similarity=0.041 Sum_probs=28.0
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
..+|+.+...|++++|+..|-+++..+|+-.
T Consensus 45 ~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~ 75 (225)
T 2yhc_A 45 LDLIYAYYKNADLPLAQAAIDRFIRLNPTHP 75 (225)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHCcCCC
Confidence 4589999999999999999999999999854
No 76
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=63.70 E-value=11 Score=23.87 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=26.0
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQL 149 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~L 149 (175)
..+|..+...|++++|..+|-+++...|+....
T Consensus 39 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 71 (136)
T 2fo7_A 39 YNLGNAYYKQGDYDEAIEYYQKALELDPRSAEA 71 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHH
Confidence 346777788899999999999999988775443
No 77
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=63.49 E-value=6.1 Score=36.19 Aligned_cols=69 Identities=9% Similarity=0.182 Sum_probs=48.9
Q ss_pred CCCCCChHHHHHHHHHHHHhHhHHhhcCC-hhhHHHHHHHHHHhcCCh--------HHHHHHHhhcCCHHHHHHHHHhcC
Q psy14697 100 IPDLKDHSAVQQYFLQEIQLGETLLAAGD-LDNGVEHLANALTVCGQP--------NQLLGVLQQTLPPNVFNALIEKLP 170 (175)
Q Consensus 100 ~p~~~d~e~~E~fFl~eV~lGE~L~a~G~-~~eaa~hf~nAl~VcpqP--------~~LL~IyQqTLPp~Vf~~Li~kLp 170 (175)
+|...|.++++.-|..= ......+++ ......+|.+|++-+.+| .++|+.|++.+|++.++..+..+|
T Consensus 763 l~~~~d~~e~~~a~~~l---~~li~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 839 (852)
T 4fdd_A 763 LRNIRDNEEKDSAFRGI---CTMISVNPSGVIQDFIFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFP 839 (852)
T ss_dssp HHTSCSSHHHHHHHHHH---HHHHHHCGGGTGGGHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCC
T ss_pred hccccccHHHHHHHHHH---HHHHHhChHhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCchhHHHHHHhCC
Confidence 45667787777665432 222222222 455667888999999999 789999999999888888877776
Q ss_pred C
Q psy14697 171 P 171 (175)
Q Consensus 171 ~ 171 (175)
+
T Consensus 840 ~ 840 (852)
T 4fdd_A 840 L 840 (852)
T ss_dssp H
T ss_pred H
Confidence 4
No 78
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=63.07 E-value=9.4 Score=26.85 Aligned_cols=31 Identities=29% Similarity=0.338 Sum_probs=20.3
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
..+|..+...|++++|..+|-+|+...|+-.
T Consensus 48 ~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 78 (177)
T 2e2e_A 48 ALLGEYYLWQNDYSNSLLAYRQALQLRGENA 78 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHCSCH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 4466666666777777777777777666443
No 79
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=62.27 E-value=10 Score=28.69 Aligned_cols=32 Identities=13% Similarity=0.168 Sum_probs=21.4
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|..+|-+|+...|+-.+
T Consensus 41 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 72 (359)
T 3ieg_A 41 YRRATVFLAMGKSKAALPDLTKVIALKMDFTA 72 (359)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCcch
Confidence 34566666677777777777777777665443
No 80
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=61.50 E-value=9.1 Score=30.68 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=31.9
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQ 154 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQ 154 (175)
|.-.+--+++|+...|-.-+-+||-.||.|.+||++-=
T Consensus 98 i~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~le~a~ 135 (161)
T 4h7y_A 98 ISFAQFELSQGNVKKSKQLLQKAVERGAVPLEMLEIAL 135 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHHHHHH
Confidence 34455567799999999999999999999999998753
No 81
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=61.46 E-value=3.1 Score=27.53 Aligned_cols=30 Identities=27% Similarity=0.327 Sum_probs=26.0
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
..+|..+...|++++|..+|-+|+...|+-
T Consensus 23 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 52 (115)
T 2kat_A 23 FTLGKTYAEHEQFDAALPHLRAALDFDPTY 52 (115)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHCCCc
Confidence 468888999999999999999999988763
No 82
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=61.03 E-value=12 Score=27.45 Aligned_cols=32 Identities=6% Similarity=0.030 Sum_probs=27.5
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|..+|-+|+...|+-..
T Consensus 80 ~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 111 (228)
T 4i17_A 80 IGKSAAYRDMKNNQEYIATLTEGIKAVPGNAT 111 (228)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHCCCcHH
Confidence 46888999999999999999999999987553
No 83
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=61.02 E-value=25 Score=28.76 Aligned_cols=45 Identities=13% Similarity=0.092 Sum_probs=33.0
Q ss_pred CCCChHHHHHHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 102 DLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 102 ~~~d~e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
+|.+++.....-.--..+|..+...|++++|..+|-+|+...|++
T Consensus 232 ~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~~ 276 (537)
T 3fp2_A 232 NTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPTP 276 (537)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred CCCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCCc
Confidence 456666555555556678888888888888888888888888774
No 84
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=60.44 E-value=11 Score=28.57 Aligned_cols=28 Identities=4% Similarity=0.016 Sum_probs=16.0
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
.+|+.+...|++++|..+|-+|+...|+
T Consensus 277 ~la~~~~~~~~~~~A~~~~~~~~~~~~~ 304 (359)
T 3ieg_A 277 RICHCFSKDEKPVEAIRICSEVLQMEPD 304 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 4555555555555666666666555553
No 85
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=60.38 E-value=5.5 Score=26.28 Aligned_cols=31 Identities=6% Similarity=0.030 Sum_probs=26.6
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
..+|..+...|++++|..+|-+|+...|+-.
T Consensus 11 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 41 (100)
T 3ma5_A 11 YALAQEHLKHDNASRALALFEELVETDPDYV 41 (100)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH
Confidence 5788899999999999999999999887643
No 86
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=60.05 E-value=9.1 Score=28.86 Aligned_cols=29 Identities=3% Similarity=0.009 Sum_probs=26.7
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
..+|+.+...|++++|+.+|-+++..+|+
T Consensus 56 ~~lg~~~~~~~~~~~A~~~~~~~l~~~p~ 84 (261)
T 3qky_A 56 FYLARAYYQNKEYLLAASEYERFIQIYQI 84 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHCCC
Confidence 56899999999999999999999999984
No 87
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=58.66 E-value=14 Score=25.93 Aligned_cols=32 Identities=16% Similarity=0.105 Sum_probs=24.8
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|..+|-+|+...|+..+
T Consensus 46 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 77 (225)
T 2vq2_A 46 LVRAEIYQYLKVNDKAQESFRQALSIKPDSAE 77 (225)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhCCCChH
Confidence 44677777888888888888888888876544
No 88
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=58.48 E-value=15 Score=24.69 Aligned_cols=32 Identities=22% Similarity=0.361 Sum_probs=24.0
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|..+|-+++...|+..+
T Consensus 114 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 145 (186)
T 3as5_A 114 FRLGVALDNLGRFDEAIDSFKIALGLRPNEGK 145 (186)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHhcCccchH
Confidence 45677777788888888888888888765443
No 89
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=57.57 E-value=19 Score=26.59 Aligned_cols=33 Identities=30% Similarity=0.379 Sum_probs=23.9
Q ss_pred HHHHHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 114 LQEIQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 114 l~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
.+-+..|+.+...|++++|..+|-+|+...|+.
T Consensus 6 ~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~ 38 (338)
T 3ro2_A 6 LELALEGERLCKSGDCRAGVSFFEAAVQVGTED 38 (338)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhCccc
Confidence 344566777777888888888888888776654
No 90
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=57.40 E-value=15 Score=26.40 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=29.6
Q ss_pred HHHHHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 114 LQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 114 l~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
.-...+|..+...|++++|..+|-+|+...|++..
T Consensus 80 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~ 114 (258)
T 3uq3_A 80 KSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADI 114 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHH
Confidence 34467899999999999999999999999887643
No 91
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=54.96 E-value=15 Score=28.86 Aligned_cols=31 Identities=16% Similarity=0.157 Sum_probs=19.9
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
.+|..+...|++++|..+|-+|+...|+-..
T Consensus 43 ~la~~~~~~~~~~~A~~~~~~al~~~p~~~~ 73 (281)
T 2c2l_A 43 NRALCYLKMQQPEQALADCRRALELDGQSVK 73 (281)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTSCTTCHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCCCHH
Confidence 4566666666777777777777766655433
No 92
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=54.47 E-value=14 Score=28.88 Aligned_cols=26 Identities=23% Similarity=0.183 Sum_probs=12.8
Q ss_pred hHhHHhhcCChhhHHHHHHHHHHhcC
Q psy14697 119 LGETLLAAGDLDNGVEHLANALTVCG 144 (175)
Q Consensus 119 lGE~L~a~G~~~eaa~hf~nAl~Vcp 144 (175)
+|..+...|++++|..+|-+|+...|
T Consensus 71 ~~~~~~~~g~~~~A~~~~~~al~~~p 96 (365)
T 4eqf_A 71 EGLKRLKEGDLPVTILFMEAAILQDP 96 (365)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCc
Confidence 34444444555555555555554444
No 93
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=54.47 E-value=8.8 Score=27.44 Aligned_cols=31 Identities=16% Similarity=0.156 Sum_probs=27.7
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
...+|..+...|++++|..+|-+|+...|+|
T Consensus 43 ~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~ 73 (176)
T 2r5s_A 43 KLAKADCLLETKQFELAQELLATIPLEYQDN 73 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTTCCGGGCCH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHhhhccCCh
Confidence 4678999999999999999999999998855
No 94
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=53.79 E-value=19 Score=25.24 Aligned_cols=25 Identities=16% Similarity=0.110 Sum_probs=21.4
Q ss_pred HHhHhHHhhc-CChhhHHHHHHHHHH
Q psy14697 117 IQLGETLLAA-GDLDNGVEHLANALT 141 (175)
Q Consensus 117 V~lGE~L~a~-G~~~eaa~hf~nAl~ 141 (175)
..+|..+... |++++|..+|-+++.
T Consensus 80 ~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 80 NNYGWFLCGRLNRPAESMAYFDKALA 105 (225)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHc
Confidence 4578888888 999999999999998
No 95
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=53.76 E-value=9.6 Score=24.97 Aligned_cols=25 Identities=20% Similarity=0.353 Sum_probs=12.5
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHh
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTV 142 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~V 142 (175)
.+|..+...|++++|..+|-+|+..
T Consensus 94 ~l~~~~~~~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 94 SLGNTYTLLQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4455555555555555555555444
No 96
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=53.49 E-value=21 Score=24.00 Aligned_cols=27 Identities=30% Similarity=0.484 Sum_probs=13.6
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcC
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCG 144 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcp 144 (175)
.+|..+...|++++|..+|-+++...|
T Consensus 47 ~~~~~~~~~~~~~~A~~~~~~~~~~~~ 73 (186)
T 3as5_A 47 HLGIAYVKTGAVDRGTELLERSLADAP 73 (186)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 344444455555555555555555544
No 97
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=53.05 E-value=19 Score=25.82 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=21.7
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|...|-+++...|+-.+
T Consensus 163 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 194 (243)
T 2q7f_A 163 FQFGMCLANEGMLDEALSQFAAVTEQDPGHAD 194 (243)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCcccHH
Confidence 45677777777777777777777777665433
No 98
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=52.99 E-value=20 Score=25.60 Aligned_cols=31 Identities=3% Similarity=0.055 Sum_probs=22.5
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
...+|..+...|++++|..+|-+|+...|+-
T Consensus 40 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 70 (213)
T 1hh8_A 40 CFNIGCMYTILKNMTEAEKAFTRSINRDKHL 70 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 3557777777788888888888887776654
No 99
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=52.69 E-value=9.5 Score=30.33 Aligned_cols=29 Identities=21% Similarity=0.355 Sum_probs=25.7
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
-+|...+.++++.+|-+||..|+.-||+.
T Consensus 19 YlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 19 YVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 35777788999999999999999999975
No 100
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=52.65 E-value=20 Score=28.94 Aligned_cols=37 Identities=16% Similarity=0.291 Sum_probs=31.6
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVL 153 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~Iy 153 (175)
..+|..+...|++++|..+|-+|+...|+..+.+..+
T Consensus 453 ~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 489 (514)
T 2gw1_A 453 IGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAI 489 (514)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHH
Confidence 4678888889999999999999999999988777655
No 101
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=52.52 E-value=25 Score=27.75 Aligned_cols=31 Identities=29% Similarity=0.328 Sum_probs=24.2
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
-..+|+.+...|++++|..+|-+|+...|+-
T Consensus 51 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~ 81 (411)
T 4a1s_A 51 LALEGERLCNAGDCRAGVAFFQAAIQAGTED 81 (411)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHhcccC
Confidence 3467888888888888888888888887663
No 102
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=52.00 E-value=18 Score=26.55 Aligned_cols=28 Identities=29% Similarity=0.361 Sum_probs=16.5
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
.+|..+...|++++|..+|-+|+...|.
T Consensus 82 ~la~~~~~~~~~~~A~~~~~~al~~~~~ 109 (275)
T 1xnf_A 82 YLGIYLTQAGNFDAAYEAFDSVLELDPT 109 (275)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHccCHHHHHHHHHHHHhcCcc
Confidence 4555555566666666666666665553
No 103
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=51.80 E-value=22 Score=25.91 Aligned_cols=33 Identities=12% Similarity=0.059 Sum_probs=26.7
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQL 149 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~L 149 (175)
..+|..+...|++++|..+|-+|+...|+-.+.
T Consensus 75 ~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 107 (252)
T 2ho1_A 75 AALAVVFQTEMEPKLADEEYRKALASDSRNARV 107 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHH
Confidence 457888888899999999999999998765443
No 104
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=50.41 E-value=14 Score=26.35 Aligned_cols=30 Identities=17% Similarity=0.193 Sum_probs=27.5
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
..+|..+...|++++|..+|-+|+...|+.
T Consensus 125 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 125 YNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 568999999999999999999999999966
No 105
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=50.21 E-value=20 Score=30.02 Aligned_cols=38 Identities=11% Similarity=0.154 Sum_probs=28.5
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQ 154 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQ 154 (175)
..+|..+...|++++|..+|-+|+...|+-.++...+.
T Consensus 311 ~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~ 348 (370)
T 1ihg_A 311 YRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELL 348 (370)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 46788888888888888888888888887655554443
No 106
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=49.57 E-value=22 Score=25.73 Aligned_cols=27 Identities=15% Similarity=0.119 Sum_probs=21.8
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhc
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVC 143 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vc 143 (175)
..+|..+...|++++|..+|-+|+..+
T Consensus 47 ~~l~~~~~~~g~~~~A~~~~~~al~~~ 73 (283)
T 3edt_B 47 NILALVYRDQNKYKEAAHLLNDALAIR 73 (283)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 357888888888888888888888775
No 107
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=49.49 E-value=14 Score=27.77 Aligned_cols=28 Identities=21% Similarity=0.331 Sum_probs=14.2
Q ss_pred hHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 119 LGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 119 lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
+|..+...|++++|..+|-+|+.+.|+-
T Consensus 276 la~~~~~~g~~~~A~~~~~~al~~~p~~ 303 (330)
T 3hym_B 276 IGYIHSLMGNFENAVDYFHTALGLRRDD 303 (330)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTTTTCSCC
T ss_pred HHHHHHHhccHHHHHHHHHHHHccCCCc
Confidence 4444444555555555555555555443
No 108
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=49.39 E-value=22 Score=27.73 Aligned_cols=29 Identities=21% Similarity=0.360 Sum_probs=25.5
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
..+|..+...|++++|+.+|-+||.++++
T Consensus 81 ~~lg~~~~~~g~~~~A~~~~~~Al~l~~~ 109 (292)
T 1qqe_A 81 VEAYKCFKSGGNSVNAVDSLENAIQIFTH 109 (292)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999998753
No 109
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=48.78 E-value=10 Score=30.31 Aligned_cols=29 Identities=7% Similarity=0.098 Sum_probs=17.2
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcC
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCG 144 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~Vcp 144 (175)
.++.++.+..+|++++|..+|.+++...+
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~~~~ 35 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLDKDS 35 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhhCc
Confidence 35556666666666666666666655443
No 110
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=48.62 E-value=22 Score=28.87 Aligned_cols=33 Identities=18% Similarity=0.246 Sum_probs=24.0
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQL 149 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~L 149 (175)
..+|..+...|++++|..+|-+|+...|+-.+.
T Consensus 234 ~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a 266 (336)
T 1p5q_A 234 SRRGEAHLAVNDFELARADFQKVLQLYPNNKAA 266 (336)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
Confidence 356777777788888888888888887765443
No 111
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=48.55 E-value=24 Score=28.52 Aligned_cols=32 Identities=9% Similarity=-0.018 Sum_probs=25.6
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCChHHH
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQPNQL 149 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~L 149 (175)
.+|..+...|++++|..+|-+||...++|.+.
T Consensus 339 ~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~~ 370 (472)
T 4g1t_A 339 ILASLHALADQYEEAEYYFQKEFSKELTPVAK 370 (472)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHSCCCHHHH
T ss_pred hHHHHHHHhccHHHHHHHHHHHHhcCCCChHH
Confidence 56777888888888888888888888877653
No 112
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=48.53 E-value=12 Score=27.90 Aligned_cols=30 Identities=17% Similarity=0.119 Sum_probs=26.0
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
-..+|+.+...|++++|..+|-+|+.+.++
T Consensus 281 ~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 281 LKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHhhc
Confidence 356899999999999999999999998765
No 113
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=48.52 E-value=20 Score=29.24 Aligned_cols=43 Identities=12% Similarity=0.094 Sum_probs=34.5
Q ss_pred ChHHHHHHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 105 DHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 105 d~e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
+.++....-.....+|..+...|++++|..+|-+||...|+-.
T Consensus 171 ~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~ 213 (338)
T 2if4_A 171 TVEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDF 213 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccch
Confidence 3445555555667899999999999999999999999988754
No 114
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=48.35 E-value=30 Score=23.49 Aligned_cols=30 Identities=20% Similarity=0.008 Sum_probs=22.7
Q ss_pred HHhHhHHhhcCC---hhhHHHHHHHHHHhcCCh
Q psy14697 117 IQLGETLLAAGD---LDNGVEHLANALTVCGQP 146 (175)
Q Consensus 117 V~lGE~L~a~G~---~~eaa~hf~nAl~VcpqP 146 (175)
..+|+.|...++ .++|..+|-+||.+-|+=
T Consensus 10 ~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~ 42 (93)
T 3bee_A 10 AAKATTLYYLHKQAMTDEVSLLLEQALQLEPYN 42 (93)
T ss_dssp HHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCC
Confidence 567888865544 578999999999987653
No 115
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=48.21 E-value=26 Score=25.06 Aligned_cols=27 Identities=19% Similarity=0.220 Sum_probs=14.7
Q ss_pred hHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 119 LGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 119 lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
+|..+...|++++|..+|-+|+...|+
T Consensus 131 ~a~~~~~~~~~~~A~~~~~~~~~~~~~ 157 (243)
T 2q7f_A 131 LGTVLVKLEQPKLALPYLQRAVELNEN 157 (243)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 444455555555555555555555554
No 116
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=48.17 E-value=19 Score=30.15 Aligned_cols=42 Identities=12% Similarity=0.181 Sum_probs=33.6
Q ss_pred CChHHHHHHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 104 KDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 104 ~d~e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
.+.++...--..-..+|..+..+|++++|+.+|.+||..+++
T Consensus 214 ~~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~ 255 (370)
T 1ihg_A 214 KDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEG 255 (370)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 345555555556678999999999999999999999996654
No 117
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=48.14 E-value=9.7 Score=24.94 Aligned_cols=27 Identities=19% Similarity=0.349 Sum_probs=17.4
Q ss_pred HhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 120 GETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 120 GE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
|..+...|++++|..+|-+|+..+++.
T Consensus 56 ~~~~~~~g~~~~A~~~~~~a~~~~~~~ 82 (164)
T 3ro3_A 56 GNAYIFLGEFETASEYYKKTLLLARQL 82 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 444455677777777777777666554
No 118
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=47.56 E-value=28 Score=23.34 Aligned_cols=35 Identities=20% Similarity=0.198 Sum_probs=30.5
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLG 151 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~ 151 (175)
..+|..+...|++++|..++-+|++.-|+-...+.
T Consensus 50 ~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 50 DYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 57899999999999999999999999888766643
No 119
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=47.39 E-value=23 Score=26.06 Aligned_cols=28 Identities=14% Similarity=0.197 Sum_probs=15.7
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
.+|..+...|++++|..+|-+|+...|+
T Consensus 79 ~lg~~~~~~~~~~~A~~~~~~a~~~~~~ 106 (272)
T 3u4t_A 79 YYGKILMKKGQDSLAIQQYQAAVDRDTT 106 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHcccHHHHHHHHHHHHhcCcc
Confidence 4555555555555555555555555443
No 120
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=47.35 E-value=16 Score=28.56 Aligned_cols=31 Identities=6% Similarity=0.038 Sum_probs=27.1
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
..+|+.+...|++++|+.+|-+|+...|+..
T Consensus 162 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 192 (292)
T 1qqe_A 162 IKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (292)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC
Confidence 4568899999999999999999999988753
No 121
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=46.79 E-value=25 Score=27.43 Aligned_cols=28 Identities=29% Similarity=0.369 Sum_probs=14.3
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
.+|..+...|++++|..+|-+|+...|+
T Consensus 252 ~l~~~~~~~g~~~~A~~~~~~al~~~p~ 279 (365)
T 4eqf_A 252 RLGATLANGDRSEEAVEAYTRALEIQPG 279 (365)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 3444455555555555555555555444
No 122
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=46.13 E-value=30 Score=29.52 Aligned_cols=40 Identities=8% Similarity=0.004 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 107 SAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 107 e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
+.....-.....+|..+..+|++++|+.+|.+||...|+-
T Consensus 262 ~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~ 301 (457)
T 1kt0_A 262 KEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEME 301 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccc
Confidence 3344455556678999999999999999999999998875
No 123
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=45.97 E-value=25 Score=27.06 Aligned_cols=31 Identities=16% Similarity=0.085 Sum_probs=21.7
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
.+|..+...|++++|..+|-+|+...|+-.+
T Consensus 103 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~ 133 (368)
T 1fch_A 103 YLGTTQAENEQELLAISALRRCLELKPDNQT 133 (368)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHCcCHHHHHHHHHHHHhcCCCCHH
Confidence 4677777777777777777777777765443
No 124
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=45.79 E-value=30 Score=25.19 Aligned_cols=34 Identities=12% Similarity=0.082 Sum_probs=26.1
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL 150 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL 150 (175)
..+|..+...|++++|..+|-+++...|+..+.+
T Consensus 179 ~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 212 (252)
T 2ho1_A 179 LEMADLLYKEREYVPARQYYDLFAQGGGQNARSL 212 (252)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHH
Confidence 5678888888888888888888888777655443
No 125
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=45.50 E-value=29 Score=25.33 Aligned_cols=33 Identities=12% Similarity=0.019 Sum_probs=28.3
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
...+|..+...|++++|..+|-+|+...|+-.+
T Consensus 46 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 78 (275)
T 1xnf_A 46 LYERGVLYDSLGLRALARNDFSQALAIRPDMPE 78 (275)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHH
Confidence 357899999999999999999999999886433
No 126
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=45.43 E-value=25 Score=31.00 Aligned_cols=36 Identities=17% Similarity=0.191 Sum_probs=30.2
Q ss_pred HHHHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697 115 QEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL 150 (175)
Q Consensus 115 ~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL 150 (175)
..+.+|..+...|+.++|++||.+|+..-|.+..++
T Consensus 312 a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t~~ 347 (372)
T 3ly7_A 312 NYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLY 347 (372)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcChHH
Confidence 346778888889999999999999999999886543
No 127
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=44.33 E-value=37 Score=23.60 Aligned_cols=27 Identities=19% Similarity=0.152 Sum_probs=23.5
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHh
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTV 142 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~V 142 (175)
...+|..+...|++++|..+|-+|+..
T Consensus 69 ~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 69 LHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 356888888999999999999999988
No 128
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=44.30 E-value=30 Score=25.01 Aligned_cols=29 Identities=14% Similarity=0.017 Sum_probs=24.5
Q ss_pred HHHHhHhHHhhcCChhhHHHHHHHHHHhc
Q psy14697 115 QEIQLGETLLAAGDLDNGVEHLANALTVC 143 (175)
Q Consensus 115 ~eV~lGE~L~a~G~~~eaa~hf~nAl~Vc 143 (175)
--..+|..+...|++++|..+|.+|+..+
T Consensus 87 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 115 (283)
T 3edt_B 87 TLNNLAVLYGKRGKYKEAEPLCKRALEIR 115 (283)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 34568888999999999999999999885
No 129
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=44.03 E-value=30 Score=26.66 Aligned_cols=34 Identities=15% Similarity=0.099 Sum_probs=26.9
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL 150 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL 150 (175)
..+|..+...|++++|..+|-+++...|+.....
T Consensus 136 ~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~ 169 (368)
T 1fch_A 136 MALAVSFTNESLQRQACEILRDWLRYTPAYAHLV 169 (368)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHH
Confidence 4567788888999999999999999888765443
No 130
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=43.80 E-value=37 Score=27.45 Aligned_cols=36 Identities=6% Similarity=0.025 Sum_probs=30.7
Q ss_pred HHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 111 QYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 111 ~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
..-.....+|..+...|++++|+.+|-+||...|+.
T Consensus 145 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~ 180 (336)
T 1p5q_A 145 EQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYE 180 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhcc
Confidence 344445678999999999999999999999999886
No 131
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=43.77 E-value=28 Score=25.81 Aligned_cols=28 Identities=14% Similarity=0.018 Sum_probs=23.8
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhc
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVC 143 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~Vc 143 (175)
...+|..+...|++++|..+|-+|+..+
T Consensus 114 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 141 (311)
T 3nf1_A 114 LNNLAVLYGKRGKYKEAEPLCKRALEIR 141 (311)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 4567888888999999999999999886
No 132
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=43.23 E-value=32 Score=25.65 Aligned_cols=34 Identities=15% Similarity=-0.026 Sum_probs=26.8
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL 150 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL 150 (175)
..+|..+...|++++|..+|-+|+...|+-.+.+
T Consensus 59 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 92 (327)
T 3cv0_A 59 RSLGLTQAENEKDGLAIIALNHARMLDPKDIAVH 92 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHH
Confidence 3578888888999999999999999887654433
No 133
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=43.15 E-value=31 Score=30.38 Aligned_cols=43 Identities=21% Similarity=0.168 Sum_probs=37.3
Q ss_pred HHHHH---HHHhHhHHhhcCChhhHHHHHHHHHHhcCC---hHHHHHHH
Q psy14697 111 QYFLQ---EIQLGETLLAAGDLDNGVEHLANALTVCGQ---PNQLLGVL 153 (175)
Q Consensus 111 ~fFl~---eV~lGE~L~a~G~~~eaa~hf~nAl~Vcpq---P~~LL~Iy 153 (175)
+-|+. |+.+|+-+...|++.+|...+.+.+.-|.. +..|+.||
T Consensus 94 r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~ 142 (394)
T 3txn_A 94 RTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQ 142 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHH
Confidence 67876 679999999999999999999999998877 77777775
No 134
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=42.85 E-value=34 Score=26.44 Aligned_cols=31 Identities=29% Similarity=0.342 Sum_probs=22.0
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
-..+|+.+...|++++|..+|-+|+...|+.
T Consensus 12 l~~~g~~~~~~g~~~~A~~~~~~al~~~~~~ 42 (406)
T 3sf4_A 12 LALEGERLCKSGDCRAGVSFFEAAVQVGTED 42 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhcCccc
Confidence 3456777777777777777777777776553
No 135
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=42.69 E-value=16 Score=28.84 Aligned_cols=32 Identities=13% Similarity=0.080 Sum_probs=22.4
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|...+.+|+...|.-.+
T Consensus 37 ~~l~~~~~~~~~~~~a~~~~~~a~~~~p~~~~ 68 (388)
T 1w3b_A 37 LLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAE 68 (388)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCchH
Confidence 34666667777777777777778777776543
No 136
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=42.59 E-value=23 Score=30.19 Aligned_cols=30 Identities=33% Similarity=0.496 Sum_probs=25.3
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
..+|..+...|++++|..+|-+|+...|++
T Consensus 141 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 170 (474)
T 4abn_A 141 NQLGEVYWKKGDVTSAHTCFSGALTHCKNK 170 (474)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHTTCCCH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCH
Confidence 457888888899999999999999988885
No 137
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=42.13 E-value=31 Score=27.46 Aligned_cols=31 Identities=13% Similarity=0.169 Sum_probs=22.2
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
..+|..+...|++++|..+|-+|+...|+-.
T Consensus 64 ~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 94 (450)
T 2y4t_A 64 YRRATVFLAMGKSKAALPDLTKVIQLKMDFT 94 (450)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 3467777777777778888888877776543
No 138
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=41.39 E-value=22 Score=27.57 Aligned_cols=38 Identities=5% Similarity=0.024 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 108 AVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 108 ~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
..+.+.-.-...|..|...|++++|+.+|-+||.+-|+
T Consensus 97 ~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~ 134 (159)
T 2hr2_A 97 EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEE 134 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 34444223346899999999999999999999998664
No 139
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=41.22 E-value=30 Score=24.11 Aligned_cols=29 Identities=10% Similarity=0.077 Sum_probs=23.6
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcC
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCG 144 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~Vcp 144 (175)
...+|..+...|++++|..+|-+|+..+.
T Consensus 29 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 57 (203)
T 3gw4_A 29 RFMLGYVYAFMDRFDEARASFQALQQQAQ 57 (203)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 35678888888999999999999988654
No 140
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=40.64 E-value=12 Score=29.50 Aligned_cols=27 Identities=11% Similarity=0.203 Sum_probs=22.7
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcC
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCG 144 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcp 144 (175)
.+|+.+...|++++|+.+|-+|+.+++
T Consensus 160 ~lg~~~~~~g~~~~A~~~~~~al~~~~ 186 (307)
T 2ifu_A 160 KASRLLVRQQKFDEAAASLQKEKSMYK 186 (307)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 568888888999999999999988764
No 141
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=40.52 E-value=30 Score=28.14 Aligned_cols=20 Identities=20% Similarity=0.275 Sum_probs=16.6
Q ss_pred CCCChhhHHHhHHHHHHhHH
Q psy14697 71 RRSDPLFKEKLKERRRKNRE 90 (175)
Q Consensus 71 RR~dP~FRKkLrerRrk~~~ 90 (175)
+.+||+.++||++.|+++++
T Consensus 142 a~~d~~l~~kL~~~r~~~~~ 161 (183)
T 1o4v_A 142 GIKYPEIARKVKEYKERMKR 161 (183)
T ss_dssp HTTCHHHHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHHH
Confidence 37899999999998877654
No 142
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=40.47 E-value=34 Score=25.55 Aligned_cols=28 Identities=11% Similarity=0.158 Sum_probs=16.9
Q ss_pred hHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 119 LGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 119 lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
+|..+...|++++|..+|-+|+...|+-
T Consensus 165 l~~~~~~~~~~~~A~~~~~~al~~~~~~ 192 (330)
T 3hym_B 165 IGLEYGLTNNSKLAERFFSQALSIAPED 192 (330)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhCCCC
Confidence 5555555666666666666666665554
No 143
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=40.39 E-value=38 Score=25.25 Aligned_cols=28 Identities=21% Similarity=0.317 Sum_probs=17.1
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
.+|..+...|++++|..+|-+|+...|+
T Consensus 211 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 238 (327)
T 3cv0_A 211 KLGATLANGNRPQEALDAYNRALDINPG 238 (327)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 4555556666666666666666666554
No 144
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=39.17 E-value=37 Score=27.02 Aligned_cols=35 Identities=9% Similarity=0.197 Sum_probs=26.1
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLG 151 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~ 151 (175)
..+|..+...|++++|..+|-+|+...|+......
T Consensus 215 ~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~ 249 (450)
T 2y4t_A 215 YKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFA 249 (450)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHH
Confidence 45677777788888888888888888877666543
No 145
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=38.80 E-value=44 Score=26.20 Aligned_cols=26 Identities=19% Similarity=0.207 Sum_probs=13.5
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhc
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVC 143 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vc 143 (175)
.+|..+...|++++|+.+|-+|+.++
T Consensus 81 ~lg~~~~~~g~~~~A~~~~~~Al~l~ 106 (307)
T 2ifu_A 81 QAGMMLKDLQRMPEAVQYIEKASVMY 106 (307)
T ss_dssp HHHHHHHHTTCGGGGHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 34444445555555555555555554
No 146
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=38.70 E-value=34 Score=26.99 Aligned_cols=28 Identities=21% Similarity=0.427 Sum_probs=16.8
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
.+|..+...|++++|...|-+|+..+|+
T Consensus 276 ~l~~~~~~~g~~~~A~~~~~~al~~~p~ 303 (388)
T 1w3b_A 276 NLANALKEKGSVAEAEDCYNTALRLCPT 303 (388)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCcc
Confidence 4555555666666666666666666554
No 147
>1rh5_B Preprotein translocase SECE subunit; protein translocation, SECY, membrane protein, protein channels, protein transport; 3.20A {Methanocaldococcus jannaschii} SCOP: f.23.28.1 PDB: 1rhz_B 2yxq_B 2yxr_B 3dkn_B
Probab=38.48 E-value=22 Score=24.94 Aligned_cols=24 Identities=21% Similarity=0.307 Sum_probs=17.9
Q ss_pred hhhhHHHHHHHHHHHHHhhhhhee
Q psy14697 44 ISGNKVVTAVAVGAAVVVGYCLYF 67 (175)
Q Consensus 44 ~~~~~~~~~agvaga~flGYcIYF 67 (175)
..+.+..+++|.+..+++||.||.
T Consensus 34 F~~iak~~~iG~~imG~IGfiIkl 57 (74)
T 1rh5_B 34 YLAVAKVTALGISLLGIIGYIIHV 57 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556677788888999999874
No 148
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=38.35 E-value=21 Score=26.40 Aligned_cols=30 Identities=17% Similarity=0.267 Sum_probs=20.7
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
...+|+.+...|++++|..+|-+|+.+.++
T Consensus 266 ~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 295 (338)
T 3ro2_A 266 CYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 295 (338)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 356677777777777777777777766544
No 149
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=38.06 E-value=42 Score=27.95 Aligned_cols=29 Identities=17% Similarity=0.261 Sum_probs=19.1
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
..+|..+...|++++|...|-+++...|+
T Consensus 520 ~~l~~~~~~~g~~~~A~~~~~~~~~~~p~ 548 (597)
T 2xpi_A 520 ANLGHAYRKLKMYDAAIDALNQGLLLSTN 548 (597)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSSC
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCC
Confidence 45666666667777777777777666653
No 150
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=36.53 E-value=93 Score=24.16 Aligned_cols=47 Identities=13% Similarity=0.007 Sum_probs=33.0
Q ss_pred CCCChHHHHHHHHHHHHhHhHHhhcCCh-------hhHHHHHHHHHH-hcCChHH
Q psy14697 102 DLKDHSAVQQYFLQEIQLGETLLAAGDL-------DNGVEHLANALT-VCGQPNQ 148 (175)
Q Consensus 102 ~~~d~e~~E~fFl~eV~lGE~L~a~G~~-------~eaa~hf~nAl~-VcpqP~~ 148 (175)
+|.+++.--.+-.-..+.|+.|...|++ ++|..+|-+||. +.|+-..
T Consensus 46 ~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~ 100 (308)
T 2ond_A 46 LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNML 100 (308)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHH
T ss_pred cCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHH
Confidence 3677776666655555555555666775 899999999999 6675543
No 151
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=36.30 E-value=30 Score=21.84 Aligned_cols=21 Identities=10% Similarity=0.075 Sum_probs=15.3
Q ss_pred hhhHHHHHHHHHHH-HHhhhhh
Q psy14697 45 SGNKVVTAVAVGAA-VVVGYCL 65 (175)
Q Consensus 45 ~~~~~~~~agvaga-~flGYcI 65 (175)
.-.+++..||+.|+ ++++|||
T Consensus 13 ~lII~~vmaGiIG~IllI~y~I 34 (40)
T 1afo_A 13 TLIIFGVMAGVIGTILLISYGI 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677888886 7889998
No 152
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=35.97 E-value=42 Score=27.24 Aligned_cols=30 Identities=17% Similarity=0.240 Sum_probs=21.3
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
..+|..+...|++++|..+|.+||...|+-
T Consensus 234 ~nla~~~~~~g~~~~A~~~~~~al~~~p~~ 263 (338)
T 2if4_A 234 LNIAACLIKLKRYDEAIGHCNIVLTEEEKN 263 (338)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 456777777777777777777777777643
No 153
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=35.24 E-value=35 Score=29.08 Aligned_cols=31 Identities=6% Similarity=-0.041 Sum_probs=27.1
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
..+|..+...|++++|..+|-+|+...|+-.
T Consensus 262 ~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 292 (474)
T 4abn_A 262 LNRATLHKYEESYGEALEGFSQAAALDPAWP 292 (474)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 4688888899999999999999999988754
No 154
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=34.66 E-value=26 Score=26.80 Aligned_cols=25 Identities=28% Similarity=0.353 Sum_probs=20.1
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALT 141 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~ 141 (175)
+..+++++..||...|-+..|+|..
T Consensus 11 L~EA~ell~kGD~vQAsEK~ykAae 35 (129)
T 2jpu_A 11 YEEAEEFLSKGDLVQACEKYYKAAE 35 (129)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 3458899999998888888888764
No 155
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=34.01 E-value=25 Score=30.43 Aligned_cols=38 Identities=29% Similarity=0.388 Sum_probs=32.8
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQ 154 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQ 154 (175)
..+|+-+...|++++|+.+|.++..-|..+.+.+.++=
T Consensus 135 ~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l 172 (429)
T 4b4t_R 135 INLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVML 172 (429)
T ss_dssp HHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHH
Confidence 46888888899999999999999999988887777654
No 156
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=33.56 E-value=82 Score=24.82 Aligned_cols=29 Identities=17% Similarity=0.103 Sum_probs=17.5
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
.+|..+...|++++|..+|-+||..-|+-
T Consensus 205 ~la~~~~~~g~~~eA~~~l~~al~~~p~~ 233 (291)
T 3mkr_A 205 GQAACHMAQGRWEAAEGVLQEALDKDSGH 233 (291)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 35555566666666666666666666543
No 157
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=33.44 E-value=55 Score=26.53 Aligned_cols=19 Identities=16% Similarity=0.128 Sum_probs=15.6
Q ss_pred CCChhhHHHhHHHHHHhHH
Q psy14697 72 RSDPLFKEKLKERRRKNRE 90 (175)
Q Consensus 72 R~dP~FRKkLrerRrk~~~ 90 (175)
.+||+.++||++.|+++++
T Consensus 154 ~~d~~l~~kl~~~r~~~~~ 172 (181)
T 4b4k_A 154 SFHDDIHDALELRREAIEK 172 (181)
T ss_dssp TTCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHH
Confidence 5899999999987776654
No 158
>3mp7_B Preprotein translocase subunit SECE; protein transport, membrane protein complex, preprotein TRAN membrane insertion,; 2.90A {Pyrococcus furiosus}
Probab=33.35 E-value=30 Score=23.25 Aligned_cols=24 Identities=8% Similarity=0.134 Sum_probs=17.4
Q ss_pred hhhhHHHHHHHHHHHHHhhhhhee
Q psy14697 44 ISGNKVVTAVAVGAAVVVGYCLYF 67 (175)
Q Consensus 44 ~~~~~~~~~agvaga~flGYcIYF 67 (175)
..+.+..+++|.+..+++||.|+.
T Consensus 30 f~~iak~~~iG~~i~G~iGf~Ikl 53 (61)
T 3mp7_B 30 YKRAAKITGLGIILIGLIGMLIRI 53 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555677777778899999873
No 159
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=33.24 E-value=40 Score=26.90 Aligned_cols=28 Identities=18% Similarity=0.208 Sum_probs=21.8
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcC
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCG 144 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcp 144 (175)
..+|..+...|++++|..+|-+|+.++.
T Consensus 186 ~~lg~~y~~~~~~~~A~~~~~~al~~~~ 213 (378)
T 3q15_A 186 FVIAGNYDDFKHYDKALPHLEAALELAM 213 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 4577777778888888888888888754
No 160
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=32.65 E-value=29 Score=30.38 Aligned_cols=34 Identities=12% Similarity=0.056 Sum_probs=24.6
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHhhcCCHHH
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNV 161 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQqTLPp~V 161 (175)
.+|+.+..+|++++|..++-+||. |++++++++.
T Consensus 345 nLa~~y~~~g~~~eA~~~~~~aL~----------i~~~~lG~~H 378 (433)
T 3qww_A 345 QAMGVCLYMQDWEGALKYGQKIIK----------PYSKHYPVYS 378 (433)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH----------HHHHHSCSSC
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHH----------HHHHHcCCCC
Confidence 367777788899888888887754 5666666543
No 161
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=32.11 E-value=46 Score=26.04 Aligned_cols=30 Identities=20% Similarity=0.365 Sum_probs=27.0
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
..+|..+...|++++|..+|-+|+...|+-
T Consensus 76 ~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 76 FFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 568999999999999999999999998754
No 162
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=32.05 E-value=37 Score=29.34 Aligned_cols=34 Identities=9% Similarity=0.135 Sum_probs=29.2
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL 150 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL 150 (175)
..+|..+...|++++|..+|-+|+...|+-.+..
T Consensus 78 ~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~ 111 (477)
T 1wao_1 78 YRRAASNMALGKFRAALRDYETVVKVKPHDKDAK 111 (477)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 4689999999999999999999999988765444
No 163
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=32.02 E-value=38 Score=28.84 Aligned_cols=30 Identities=20% Similarity=0.303 Sum_probs=16.9
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
.+|..+...|++++|..+|-+|+.+.|+-.
T Consensus 356 ~~g~a~~~~g~~~~A~~~~~~al~l~P~~~ 385 (457)
T 1kt0_A 356 RRGEAQLLMNEFESAKGDFEKVLEVNPQNK 385 (457)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 456666666666666666666666665443
No 164
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=31.91 E-value=51 Score=28.19 Aligned_cols=28 Identities=21% Similarity=0.270 Sum_probs=15.0
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
.+|..+...|++++|..+|-+|+...|+
T Consensus 96 ~la~~~~~~g~~~~A~~~~~~al~~~p~ 123 (568)
T 2vsy_A 96 WLGHALEDAGQAEAAAAAYTRAHQLLPE 123 (568)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 3455555555555555555555555554
No 165
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=31.87 E-value=44 Score=31.18 Aligned_cols=33 Identities=18% Similarity=0.279 Sum_probs=25.5
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQL 149 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~L 149 (175)
..+|..+...|++++|..+|-+||.+-|+=.+.
T Consensus 47 ~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a 79 (723)
T 4gyw_A 47 SNLASVLQQQGKLQEALMHYKEAIRISPTFADA 79 (723)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 457888888888888888888888887765443
No 166
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=31.33 E-value=53 Score=28.09 Aligned_cols=28 Identities=14% Similarity=0.118 Sum_probs=13.4
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
.+|..+...|++++|..+|-+|+...|+
T Consensus 62 ~lg~~~~~~g~~~~A~~~~~~al~~~p~ 89 (568)
T 2vsy_A 62 RLGRVRWTQQRHAEAAVLLQQASDAAPE 89 (568)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 3444444445555555555555444443
No 167
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=31.33 E-value=64 Score=24.05 Aligned_cols=26 Identities=19% Similarity=0.282 Sum_probs=18.3
Q ss_pred HHhHhHHhh----cCChhhHHHHHHHHHHh
Q psy14697 117 IQLGETLLA----AGDLDNGVEHLANALTV 142 (175)
Q Consensus 117 V~lGE~L~a----~G~~~eaa~hf~nAl~V 142 (175)
..+|..+.. .|++++|..+|-+|+..
T Consensus 42 ~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~ 71 (273)
T 1ouv_A 42 FNLGVLYYQGQGVEKNLKKAASFYAKACDL 71 (273)
T ss_dssp HHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCcCCCHHHHHHHHHHHHHC
Confidence 345666666 77777777777777766
No 168
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=31.21 E-value=81 Score=25.37 Aligned_cols=19 Identities=16% Similarity=0.235 Sum_probs=16.0
Q ss_pred CCChhhHHHhHHHHHHhHH
Q psy14697 72 RSDPLFKEKLKERRRKNRE 90 (175)
Q Consensus 72 R~dP~FRKkLrerRrk~~~ 90 (175)
.+||+.++||++-|+++++
T Consensus 144 ~~d~~l~~kl~~~r~~~~~ 162 (173)
T 4grd_A 144 GNSVDYANRLAAFRVRQNE 162 (173)
T ss_dssp TSCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 6899999999987777654
No 169
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=31.01 E-value=42 Score=22.47 Aligned_cols=30 Identities=17% Similarity=0.184 Sum_probs=26.5
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
-..+|..+..+|++..|+.-|-.|+...+.
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~ 37 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDE 37 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhc
Confidence 458999999999999999999999998743
No 170
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=30.56 E-value=49 Score=23.17 Aligned_cols=28 Identities=14% Similarity=0.334 Sum_probs=24.3
Q ss_pred HHHHHHhHhHHhhcCChhhHHHHHHHHH
Q psy14697 113 FLQEIQLGETLLAAGDLDNGVEHLANAL 140 (175)
Q Consensus 113 Fl~eV~lGE~L~a~G~~~eaa~hf~nAl 140 (175)
..++++++-+++-.|+|+.|...|-+|+
T Consensus 12 i~e~~k~ARe~Al~GnYdta~~yY~g~~ 39 (78)
T 2rpa_A 12 IVENVKLAREYALLGNYDSAMVYYQGVL 39 (78)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 6789999999999999998888777766
No 171
>2ww9_B Protein transport protein SSS1; ribonucleoprotein, transmembrane, phospho signal sequence, membrane, ribosome, transport; 8.60A {Saccharomyces cerevisiae} PDB: 2wwa_B
Probab=30.47 E-value=34 Score=24.34 Aligned_cols=24 Identities=13% Similarity=0.228 Sum_probs=17.4
Q ss_pred hhhhHHHHHHHHHHHHHhhhhhee
Q psy14697 44 ISGNKVVTAVAVGAAVVVGYCLYF 67 (175)
Q Consensus 44 ~~~~~~~~~agvaga~flGYcIYF 67 (175)
..+.+..+++|.+..+++||.|+.
T Consensus 47 f~~iak~t~iG~~imG~IGfiIkL 70 (80)
T 2ww9_B 47 YTKIVKAVGIGFIAVGIIGYAIKL 70 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556677788888999999863
No 172
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=29.40 E-value=52 Score=25.88 Aligned_cols=30 Identities=17% Similarity=0.268 Sum_probs=17.6
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
.+|+.+...|++++|..+|-+|+.++.+=.
T Consensus 348 ~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 377 (411)
T 4a1s_A 348 SLGNAHSAIGGHERALKYAEQHLQLAXXXX 377 (411)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHhhcc
Confidence 345555556666666666666666655433
No 173
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=29.12 E-value=58 Score=30.34 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=29.1
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL 150 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL 150 (175)
..+|..+...|++++|+.+|-+||..-|+=.+.+
T Consensus 81 ~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~ 114 (723)
T 4gyw_A 81 SNMGNTLKEMQDVQGALQCYTRAIQINPAFADAH 114 (723)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 5689999999999999999999999988755543
No 174
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=29.00 E-value=32 Score=29.83 Aligned_cols=36 Identities=8% Similarity=-0.016 Sum_probs=25.5
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHhhcCCHHHHH
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFN 163 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQqTLPp~Vf~ 163 (175)
.+|..+..+|++++|..++-+|| .||++++||..-+
T Consensus 334 ~L~~~y~~~g~~~eA~~~~~~~L----------~i~~~~lg~~Hp~ 369 (429)
T 3qwp_A 334 CAMDACINLGLLEEALFYGTRTM----------EPYRIFFPGSHPV 369 (429)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHH----------HHHHHHSCSSCHH
T ss_pred HHHHHHHhhccHHHHHHHHHHHH----------HhHHHHcCCCChH
Confidence 46777788899988888887665 4666666664433
No 175
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=28.45 E-value=66 Score=25.38 Aligned_cols=23 Identities=13% Similarity=0.170 Sum_probs=12.2
Q ss_pred CChhhHHHHHHHHHHhcCChHHH
Q psy14697 127 GDLDNGVEHLANALTVCGQPNQL 149 (175)
Q Consensus 127 G~~~eaa~hf~nAl~VcpqP~~L 149 (175)
|++++|...|-+++..+|+-..+
T Consensus 180 ~~~~eA~~~~~~~l~~~p~~~~~ 202 (291)
T 3mkr_A 180 EKLQDAYYIFQEMADKCSPTLLL 202 (291)
T ss_dssp THHHHHHHHHHHHHHHSCCCHHH
T ss_pred hHHHHHHHHHHHHHHhCCCcHHH
Confidence 44555555555555555544443
No 176
>3qe9_Y Exonuclease 1; exonuclease, hydrolase-DNA complex; HET: DNA; 2.51A {Homo sapiens} PDB: 3qeb_Z* 3qea_Z*
Probab=27.75 E-value=66 Score=27.74 Aligned_cols=24 Identities=21% Similarity=0.504 Sum_probs=15.0
Q ss_pred HhHHhhcCChhhHHHHHHHHHHhc
Q psy14697 120 GETLLAAGDLDNGVEHLANALTVC 143 (175)
Q Consensus 120 GE~L~a~G~~~eaa~hf~nAl~Vc 143 (175)
++++...|+.++|..+|.++..|.
T Consensus 103 ~~~~~~~g~~~~a~~~f~~~~~vt 126 (352)
T 3qe9_Y 103 GKQLLREGKVSEARECFTRSINIT 126 (352)
T ss_dssp HHHHTTSSCCHHHHHHHGGGCCCC
T ss_pred HHHHHHhCCHHHHHHHHhhcCCCC
Confidence 334455667677777777765554
No 177
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=27.55 E-value=36 Score=26.31 Aligned_cols=40 Identities=15% Similarity=0.315 Sum_probs=28.7
Q ss_pred CCCChHHHHHHHHHHHHhHhHHhhcCC----------hhhHHHHHHHHHHhcCChHH
Q psy14697 102 DLKDHSAVQQYFLQEIQLGETLLAAGD----------LDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 102 ~~~d~e~~E~fFl~eV~lGE~L~a~G~----------~~eaa~hf~nAl~VcpqP~~ 148 (175)
+|+|++.. +.+|..|+..|. +++|+..|-+||.+-|+=.+
T Consensus 32 ~P~~aea~-------~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~ 81 (158)
T 1zu2_A 32 NPLDADNL-------TRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDE 81 (158)
T ss_dssp CTTCHHHH-------HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred CCCCHHHH-------HHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHH
Confidence 45676654 456666666554 56999999999999987654
No 178
>3b9w_A Ammonium transporter family; membrane protein, ammonia transport, rhesus protein, transpo protein; HET: BOG; 1.30A {Nitrosomonas europaea} PDB: 3bhs_A 3b9y_A* 3b9z_A*
Probab=27.54 E-value=31 Score=30.88 Aligned_cols=22 Identities=14% Similarity=0.004 Sum_probs=14.3
Q ss_pred hhhhHHHHHHHHHHHHHhhhhh
Q psy14697 44 ISGNKVVTAVAVGAAVVVGYCL 65 (175)
Q Consensus 44 ~~~~~~~~~agvaga~flGYcI 65 (175)
+.+|.++.++|+.++.++.|.+
T Consensus 208 ~~NT~lAaaag~l~~~~~~~~~ 229 (407)
T 3b9w_A 208 IVNTLLALCGATLATYFLSALF 229 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHH
Confidence 4566676677766666666654
No 179
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=26.94 E-value=61 Score=25.22 Aligned_cols=27 Identities=15% Similarity=0.038 Sum_probs=19.3
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhc
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVC 143 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vc 143 (175)
...|+.+...|++++|...|-+|+..+
T Consensus 207 ~~~~~~~~~~g~~~~A~~~~~~al~~~ 233 (308)
T 2ond_A 207 LAYIDYLSHLNEDNNTRVLFERVLTSG 233 (308)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcc
Confidence 344666667777888888888888765
No 180
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=26.42 E-value=38 Score=20.24 Aligned_cols=26 Identities=19% Similarity=0.342 Sum_probs=15.3
Q ss_pred hhhhhhHHHHHHH-HHHHHHhhhhhee
Q psy14697 42 ELISGNKVVTAVA-VGAAVVVGYCLYF 67 (175)
Q Consensus 42 ~m~~~~~~~~~ag-vaga~flGYcIYF 67 (175)
++...+..+++.| ++++++++-.|||
T Consensus 3 ~L~~gaIaGIVvgdi~~t~~i~~~vy~ 29 (33)
T 2l34_A 3 TVSPGVLAGIVVGDLVLTVLIALAVYF 29 (33)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcceEEeEeHHHHHHHHHHHHHHhh
Confidence 4445555555544 4446677777776
No 181
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=26.38 E-value=45 Score=30.91 Aligned_cols=44 Identities=11% Similarity=-0.053 Sum_probs=35.1
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCCh----HHHHHHHhhcCCHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQP----NQLLGVLQQTLPPN 160 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP----~~LL~IyQqTLPp~ 160 (175)
.-+|--.+.+++|.+|.+||.-|+.-||+. +..+.+++.-+|-.
T Consensus 274 YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~a~gfr~~a~K~lI~V~ 321 (523)
T 4b4t_S 274 FYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSLGFLQQSNKLHCCIQ 321 (523)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSSCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCCcchhhhhHHHHHHHHHHhHH
Confidence 457888899999999999999999999865 34667776655543
No 182
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=26.15 E-value=71 Score=23.61 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=24.0
Q ss_pred HhHhHHhhcCChhhHHH-------HHHHHHHhcCChHHHH
Q psy14697 118 QLGETLLAAGDLDNGVE-------HLANALTVCGQPNQLL 150 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~-------hf~nAl~VcpqP~~LL 150 (175)
...|.++..|.++||++ .+..|++.-..++.++
T Consensus 20 RrAe~ll~~gkydeAIech~kAa~yL~eAmkltqs~qa~~ 59 (97)
T 2crb_A 20 RRADRLLAAGKYEEAISCHRKATTYLSEAMKLTESEQAHL 59 (97)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred hHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 46789999999888855 5666777776666544
No 183
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=26.03 E-value=69 Score=25.68 Aligned_cols=20 Identities=15% Similarity=0.106 Sum_probs=16.7
Q ss_pred CCCChhhHHHhHHHHHHhHH
Q psy14697 71 RRSDPLFKEKLKERRRKNRE 90 (175)
Q Consensus 71 RR~dP~FRKkLrerRrk~~~ 90 (175)
+.+||+.++||++.|+++++
T Consensus 142 a~~d~~l~~kl~~~r~~~~~ 161 (170)
T 1xmp_A 142 GSFHDDIHDALELRREAIEK 161 (170)
T ss_dssp HTTCHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHH
Confidence 46899999999998877654
No 184
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=25.99 E-value=49 Score=29.43 Aligned_cols=41 Identities=7% Similarity=-0.096 Sum_probs=0.0
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHhhcCCHHHHHHHHHh
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLPPNVFNALIEK 168 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQqTLPp~Vf~~Li~k 168 (175)
.+|+.+..+|++++|..++-+||. |++++++++.-+.....
T Consensus 356 nLa~~y~~~g~~~eA~~~~~~aL~----------i~~~~lG~~Hp~~a~~l 396 (490)
T 3n71_A 356 IASEVLSYLQAYEEASHYARRMVD----------GYMKLYHHNNAQLGMAV 396 (490)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH----------HHHHHSCTTCHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHH----------HHHHHcCCCCHHHHHHH
No 185
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=25.65 E-value=32 Score=27.37 Aligned_cols=30 Identities=10% Similarity=0.296 Sum_probs=23.4
Q ss_pred HHHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 116 EIQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 116 eV~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
...+|..+...|++++|..+|-+|+.++++
T Consensus 187 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 216 (383)
T 3ulq_A 187 HSLFATNFLDLKQYEDAISHFQKAYSMAEA 216 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 345677788888899999999998887653
No 186
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=25.61 E-value=1e+02 Score=26.33 Aligned_cols=50 Identities=20% Similarity=0.241 Sum_probs=43.7
Q ss_pred CCCChHHHHHHHHHHHHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHHHHHhhcCC
Q psy14697 102 DLKDHSAVQQYFLQEIQLGETLLAAGDLDNGVEHLANALTVCGQPNQLLGVLQQTLP 158 (175)
Q Consensus 102 ~~~d~e~~E~fFl~eV~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL~IyQqTLP 158 (175)
.|.|.+.+..+| |-|+-.|+++.|...+--+....|+-+...+.|++-|-
T Consensus 27 ~P~da~~R~~Lf-------qLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~ 76 (273)
T 1zbp_A 27 SPKDASLRSSFI-------ELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVK 76 (273)
T ss_dssp CTTCHHHHHHHH-------HHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHH-------HHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHH
Confidence 478998887776 57888999999999999999999999999999987643
No 187
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=25.14 E-value=65 Score=25.23 Aligned_cols=29 Identities=17% Similarity=0.111 Sum_probs=22.4
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
..+|..+...|++++|..++-+|+.++++
T Consensus 139 ~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 139 RIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 34677777788888888888888887764
No 188
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=25.09 E-value=57 Score=29.40 Aligned_cols=28 Identities=21% Similarity=0.296 Sum_probs=15.9
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
.+|..+...|++++|..+|-+||..-|+
T Consensus 472 ~lg~~~~~~g~~~~A~~~~~~al~l~P~ 499 (681)
T 2pzi_A 472 YRAVAELLTGDYDSATKHFTEVLDTFPG 499 (681)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 3455555555566666666666655553
No 189
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=24.92 E-value=45 Score=21.20 Aligned_cols=10 Identities=30% Similarity=0.355 Sum_probs=3.7
Q ss_pred HHHHHHhhhh
Q psy14697 55 VGAAVVVGYC 64 (175)
Q Consensus 55 vaga~flGYc 64 (175)
+++.+.++-+
T Consensus 20 v~~v~ii~~~ 29 (44)
T 2l2t_A 20 LFILVIVGLT 29 (44)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 190
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=24.32 E-value=86 Score=25.20 Aligned_cols=34 Identities=18% Similarity=0.110 Sum_probs=29.4
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL 150 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL 150 (175)
..+|..+...|++++|...|-+|+...|+-.+++
T Consensus 251 ~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 284 (472)
T 4g1t_A 251 RSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLH 284 (472)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred HHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHH
Confidence 3578889999999999999999999999876654
No 191
>1atx_A ATX IA; SEA anemone toxin; NMR {Anemonia sulcata} SCOP: g.9.1.1
Probab=24.31 E-value=28 Score=22.63 Aligned_cols=21 Identities=29% Similarity=0.498 Sum_probs=15.7
Q ss_pred CCCCCCcccccCccccccccc
Q psy14697 1 FGGCGSSWVLPSSFCWFGDWC 21 (175)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~ 21 (175)
|+||.|.|--=.+.-+++++|
T Consensus 24 ~~~CpsGW~kC~~~~~i~~CC 44 (46)
T 1atx_A 24 VFGCPSGWNNCEGRAIIGYCC 44 (46)
T ss_dssp SSCCCTTCEEECCSSSSSEEE
T ss_pred ecCCcchhhhccCccchhhhh
Confidence 578999997655556777777
No 192
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=24.11 E-value=37 Score=26.23 Aligned_cols=30 Identities=7% Similarity=0.166 Sum_probs=25.9
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCCh
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQP 146 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP 146 (175)
..+|..+...|++++|..++-+||.++++.
T Consensus 200 ~nlg~~y~~~~~y~~A~~~~~~al~~~~~~ 229 (293)
T 3u3w_A 200 YNHAKALYLDSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHc
Confidence 468888889999999999999999987543
No 193
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=23.67 E-value=58 Score=25.89 Aligned_cols=20 Identities=20% Similarity=0.230 Sum_probs=16.7
Q ss_pred CCCChhhHHHhHHHHHHhHH
Q psy14697 71 RRSDPLFKEKLKERRRKNRE 90 (175)
Q Consensus 71 RR~dP~FRKkLrerRrk~~~ 90 (175)
+.+||+.++||++.|+++++
T Consensus 134 ~~~d~~l~~kl~~~r~~~~~ 153 (163)
T 3ors_A 134 SIQNPSLVEKLNQYESSLIQ 153 (163)
T ss_dssp HTTCTHHHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHH
Confidence 46899999999998877664
No 194
>2wwb_B SEC61gamma, protein transport protein SEC61 subunit gamma; ribosome, protein EXIT tunnel, cotranslational protein translocation, protein conducting channel; 6.48A {Canis lupus familiaris}
Probab=23.58 E-value=30 Score=23.82 Aligned_cols=24 Identities=13% Similarity=0.261 Sum_probs=17.2
Q ss_pred hhhhHHHHHHHHHHHHHhhhhhee
Q psy14697 44 ISGNKVVTAVAVGAAVVVGYCLYF 67 (175)
Q Consensus 44 ~~~~~~~~~agvaga~flGYcIYF 67 (175)
..+.+..+++|.+..+++||.|+.
T Consensus 33 f~~iak~~~iG~~i~G~IGf~Ikl 56 (68)
T 2wwb_B 33 FQKIAMATAIGFAIMGFIGFFVKL 56 (68)
T ss_dssp HHHHHHHSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555667777778899999863
No 195
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=23.49 E-value=1.2e+02 Score=23.18 Aligned_cols=28 Identities=18% Similarity=0.301 Sum_probs=19.7
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcC
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCG 144 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcp 144 (175)
..+|+.+...|++++|..+|-+|+.+.+
T Consensus 271 ~~la~~~~~~g~~~~A~~~~~~a~~~~~ 298 (406)
T 3sf4_A 271 YSLGNTYTLLQDYEKAIDYHLKHLAIAQ 298 (406)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 3567777777777777777777776643
No 196
>3tek_A Thermodbp-single stranded DNA binding protein; leucine zipper; 2.00A {Thermoproteus tenax}
Probab=23.11 E-value=67 Score=25.12 Aligned_cols=50 Identities=22% Similarity=0.270 Sum_probs=31.9
Q ss_pred ccccccCCCCccchhhhhhhhHHHHHHHHHHHHH--hhhhheeccCCCCChhhHHHhHH
Q psy14697 27 WSGRIGPSGRLMSPMELISGNKVVTAVAVGAAVV--VGYCLYFDKKRRSDPLFKEKLKE 83 (175)
Q Consensus 27 ~~~~~~~~~~~~~~~~m~~~~~~~~~agvaga~f--lGYcIYFD~KRR~dP~FRKkLre 83 (175)
.-||.|+.||-= .-+.+++++||..-.-| =|-.++ .|=|+..+||+.+++
T Consensus 40 LFGryG~gGRPd-----FFrllFGAvagsLRe~fgp~ge~~F--n~iRds~~Fr~ssre 91 (148)
T 3tek_A 40 LFGRYGPGGRPE-----FFKLLFGAVAGSLREQFGPDGENIF--NRIRDSEKFRETSRE 91 (148)
T ss_dssp HHSSSBTTTBCT-----HHHHHHHHHHHHHHHHHTTHHHHHH--HHHTTSHHHHHHHHH
T ss_pred hhhccCCCCCcc-----HHHHHHHHhhhhHHHhcCccHHHHH--HHhhcHHHHHHHHHH
Confidence 448999999875 56666766666554322 122222 345778888888875
No 197
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=23.11 E-value=86 Score=26.95 Aligned_cols=32 Identities=6% Similarity=-0.079 Sum_probs=27.5
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQ 148 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~ 148 (175)
..+|..+...|++++|..+|-+|+...|+-.+
T Consensus 44 ~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~ 75 (477)
T 1wao_1 44 GNRSLAYLRTECYGYALGDATRAIELDKKYIK 75 (477)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHH
Confidence 46899999999999999999999999876443
No 198
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=23.10 E-value=1.5e+02 Score=23.41 Aligned_cols=29 Identities=21% Similarity=0.243 Sum_probs=22.0
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
..+|..+...|++++|..+|-+|+.++++
T Consensus 265 ~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 265 FGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 34677777788888888888888887654
No 199
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=22.99 E-value=50 Score=20.15 Aligned_cols=25 Identities=20% Similarity=0.165 Sum_probs=10.5
Q ss_pred HHHHHHHHH-HHHHhhhhheeccCCC
Q psy14697 48 KVVTAVAVG-AAVVVGYCLYFDKKRR 72 (175)
Q Consensus 48 ~~~~~agva-ga~flGYcIYFD~KRR 72 (175)
+.+++.|+. |.++++-.+||=++||
T Consensus 13 IAGiVvG~v~gv~li~~l~~~~~rrr 38 (38)
T 2k1k_A 13 IVAVIFGLLLGAALLLGILVFRSRRA 38 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred eeeeehHHHHHHHHHHHHHHHHeecC
Confidence 344444432 2333333444545554
No 200
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=22.92 E-value=82 Score=25.51 Aligned_cols=20 Identities=15% Similarity=0.238 Sum_probs=16.6
Q ss_pred CCCChhhHHHhHHHHHHhHH
Q psy14697 71 RRSDPLFKEKLKERRRKNRE 90 (175)
Q Consensus 71 RR~dP~FRKkLrerRrk~~~ 90 (175)
+.+||+.++||++.|+++++
T Consensus 152 a~~d~~l~~kL~~~r~~~~~ 171 (182)
T 1u11_A 152 ALYNPALAARLETWRALQTA 171 (182)
T ss_dssp GGGCHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHH
Confidence 56899999999998877654
No 201
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=22.71 E-value=45 Score=26.64 Aligned_cols=20 Identities=20% Similarity=0.240 Sum_probs=16.6
Q ss_pred CCCChhhHHHhHHHHHHhHH
Q psy14697 71 RRSDPLFKEKLKERRRKNRE 90 (175)
Q Consensus 71 RR~dP~FRKkLrerRrk~~~ 90 (175)
+.+||+.++||++.|+++++
T Consensus 136 ~~~d~~l~~kl~~~r~~~~~ 155 (166)
T 3oow_A 136 QHTDINIAKALAEFRAEQTR 155 (166)
T ss_dssp GGGCHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHH
Confidence 46899999999998877664
No 202
>3ldt_A Outer membrane protein, OMPA family protein; OMPA-like domain, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Legionella pneumophila}
Probab=22.48 E-value=9.1 Score=29.52 Aligned_cols=24 Identities=29% Similarity=0.340 Sum_probs=7.1
Q ss_pred hhhHHHHHHHHHHHHHhhhhheeccC
Q psy14697 45 SGNKVVTAVAVGAAVVVGYCLYFDKK 70 (175)
Q Consensus 45 ~~~~~~~~agvaga~flGYcIYFD~K 70 (175)
.+.++++++|.++.+.+|| |.|.+
T Consensus 4 ~ga~~ga~~g~~~g~~ig~--~~d~q 27 (169)
T 3ldt_A 4 SGTLIGAAAGGTVGLVASI--YRDSK 27 (169)
T ss_dssp -------------CCTTHH--HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHHH
Confidence 4455666666665566776 77754
No 203
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=22.28 E-value=38 Score=30.47 Aligned_cols=29 Identities=21% Similarity=0.324 Sum_probs=25.4
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHh-cCCh
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTV-CGQP 146 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~V-cpqP 146 (175)
-+|.-.+.++++.+|-+||..|+.- ||+.
T Consensus 225 YlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 225 LLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 4677778899999999999999999 9963
No 204
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=22.22 E-value=65 Score=24.78 Aligned_cols=29 Identities=7% Similarity=0.202 Sum_probs=25.2
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
..+|..+...|++++|..+|-+|+.++++
T Consensus 200 ~nlg~~y~~~~~y~~Al~~~~kal~~~~~ 228 (293)
T 2qfc_A 200 YNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHhhHHHHHHHHHHHHHHHHh
Confidence 36788888999999999999999998754
No 205
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=22.22 E-value=75 Score=25.11 Aligned_cols=20 Identities=15% Similarity=0.127 Sum_probs=16.7
Q ss_pred CCCChhhHHHhHHHHHHhHH
Q psy14697 71 RRSDPLFKEKLKERRRKNRE 90 (175)
Q Consensus 71 RR~dP~FRKkLrerRrk~~~ 90 (175)
..+||+.++||++.|+++++
T Consensus 129 ~~~d~~l~~kl~~~r~~~~~ 148 (159)
T 3rg8_A 129 SLYDKEIADSVKSYMESNAQ 148 (159)
T ss_dssp TTTCHHHHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHH
Confidence 46999999999998877664
No 206
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=22.21 E-value=1.1e+02 Score=23.45 Aligned_cols=25 Identities=16% Similarity=0.163 Sum_probs=12.1
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALT 141 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~ 141 (175)
-.+|......|++++|..+|-+|+.
T Consensus 119 ~~l~~~~~~~~~~~~Ai~~~~~al~ 143 (293)
T 3u3w_A 119 YYVAAYVLKKVDYEYCILELKKLLN 143 (293)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcccCHHHHHHHHHHHHH
Confidence 3344444555555555555554443
No 207
>2kse_A Sensor protein QSEC; methods development, histidine kinase receptor, membrane domain, two-helical hairpin, cell-free synthesis, ATP- binding; NMR {Escherichia coli}
Probab=22.08 E-value=72 Score=22.38 Aligned_cols=29 Identities=14% Similarity=0.208 Sum_probs=13.0
Q ss_pred HHHHhhhhheeccCCCCChhhHHHhHHHH
Q psy14697 57 AAVVVGYCLYFDKKRRSDPLFKEKLKERR 85 (175)
Q Consensus 57 ga~flGYcIYFD~KRR~dP~FRKkLrerR 85 (175)
+.+++++.+|+-.++.-+-.+.+.|+.+-
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~d~~L~~~a 53 (186)
T 2kse_A 25 TWLLSSFVAWKQTTDNVDELFDTQLMLFA 53 (186)
T ss_dssp HHHHHHHHHSCCCSCC-------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677899999999888888888887643
No 208
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=22.03 E-value=1.6e+02 Score=24.71 Aligned_cols=35 Identities=9% Similarity=-0.039 Sum_probs=23.8
Q ss_pred HHhHhHHhhcCC-hhhHHHHHHHHHHhcCChHHHHH
Q psy14697 117 IQLGETLLAAGD-LDNGVEHLANALTVCGQPNQLLG 151 (175)
Q Consensus 117 V~lGE~L~a~G~-~~eaa~hf~nAl~VcpqP~~LL~ 151 (175)
..+|..+...|+ +++|+.+|-+||...|+-.+...
T Consensus 135 ~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~ 170 (382)
T 2h6f_A 135 HFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWH 170 (382)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHH
Confidence 456777777775 77777777777777776555543
No 209
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=22.02 E-value=97 Score=24.53 Aligned_cols=25 Identities=12% Similarity=0.066 Sum_probs=21.5
Q ss_pred hHhHHhhcCChhhHHHHHHHHHHhc
Q psy14697 119 LGETLLAAGDLDNGVEHLANALTVC 143 (175)
Q Consensus 119 lGE~L~a~G~~~eaa~hf~nAl~Vc 143 (175)
+|..+...|++++|..+|-+|+...
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~ 133 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKL 133 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTG
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 7888888899999999999998873
No 210
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=22.01 E-value=1.1e+02 Score=22.47 Aligned_cols=14 Identities=14% Similarity=0.162 Sum_probs=8.4
Q ss_pred ChhhHHHHHHHHHH
Q psy14697 128 DLDNGVEHLANALT 141 (175)
Q Consensus 128 ~~~eaa~hf~nAl~ 141 (175)
++++|+.+|-+|+.
T Consensus 68 ~~~~A~~~~~~A~~ 81 (212)
T 3rjv_A 68 DYPQARQLAEKAVE 81 (212)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 55666666666643
No 211
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=21.81 E-value=90 Score=26.29 Aligned_cols=30 Identities=13% Similarity=0.019 Sum_probs=25.3
Q ss_pred HhHhHHhhcCChhhHHHHHHHHHHhcCChH
Q psy14697 118 QLGETLLAAGDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 118 ~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~ 147 (175)
..++.....|++++|...|-+||..+|++.
T Consensus 51 ~~~~~~~~~~~~~~a~~~~~ral~~~p~~~ 80 (530)
T 2ooe_A 51 LYIEAEIKAKNYDKVEKLFQRCLMKVLHID 80 (530)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTTCCCHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHhcCCChH
Confidence 356666778999999999999999999864
No 212
>1q90_R Cytochrome B6-F complex iron-sulfur subunit; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.12.1
Probab=21.79 E-value=60 Score=20.97 Aligned_cols=22 Identities=18% Similarity=0.096 Sum_probs=11.9
Q ss_pred hhHHHHHHHHHHHHHhhhhhee
Q psy14697 46 GNKVVTAVAVGAAVVVGYCLYF 67 (175)
Q Consensus 46 ~~~~~~~agvaga~flGYcIYF 67 (175)
..++++++.++++...-|.-||
T Consensus 17 ~l~~G~~a~~a~~~~~P~v~ff 38 (49)
T 1q90_R 17 LILAGGAGLPITTLALGYGAFF 38 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhheee
Confidence 3344455555555566666665
No 213
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=21.79 E-value=40 Score=26.03 Aligned_cols=30 Identities=10% Similarity=0.156 Sum_probs=24.4
Q ss_pred HhHhHHhhc-----------CChhhHHHHHHHHHHhcCChH
Q psy14697 118 QLGETLLAA-----------GDLDNGVEHLANALTVCGQPN 147 (175)
Q Consensus 118 ~lGE~L~a~-----------G~~~eaa~hf~nAl~VcpqP~ 147 (175)
.+|-.+.+. |++++|+.+|-+||.+-|+=.
T Consensus 85 ~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 85 CIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 577777765 479999999999999988743
No 214
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=21.53 E-value=19 Score=32.50 Aligned_cols=20 Identities=20% Similarity=0.053 Sum_probs=16.4
Q ss_pred CCCChhhHHHhHHHHHHhHH
Q psy14697 71 RRSDPLFKEKLKERRRKNRE 90 (175)
Q Consensus 71 RR~dP~FRKkLrerRrk~~~ 90 (175)
+.+||+.++||++.|.+++.
T Consensus 392 ~~~~~~l~~kl~~~~~~~~~ 411 (425)
T 2h31_A 392 GLSNHLVWSKLRASILNTWI 411 (425)
T ss_dssp HTTCHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHH
Confidence 46899999999988876653
No 215
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=21.40 E-value=59 Score=26.03 Aligned_cols=19 Identities=32% Similarity=0.426 Sum_probs=16.1
Q ss_pred CCChhhHHHhHHHHHHhHH
Q psy14697 72 RSDPLFKEKLKERRRKNRE 90 (175)
Q Consensus 72 R~dP~FRKkLrerRrk~~~ 90 (175)
.+||+.++||++.|+++++
T Consensus 138 ~~d~~l~~kl~~~r~~~~~ 156 (169)
T 3trh_A 138 LQDKSIAQKLVQQRTAKRE 156 (169)
T ss_dssp TTCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 6899999999998877654
No 216
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=21.30 E-value=59 Score=26.16 Aligned_cols=20 Identities=15% Similarity=0.242 Sum_probs=16.7
Q ss_pred CCCChhhHHHhHHHHHHhHH
Q psy14697 71 RRSDPLFKEKLKERRRKNRE 90 (175)
Q Consensus 71 RR~dP~FRKkLrerRrk~~~ 90 (175)
..+||+.++||++.|+++++
T Consensus 143 a~~d~~l~~kl~~~r~~~~~ 162 (174)
T 3kuu_A 143 ALHDTELAGRLAHWRQSQTD 162 (174)
T ss_dssp HTTCHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHH
Confidence 37899999999998877664
No 217
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=21.23 E-value=82 Score=22.01 Aligned_cols=15 Identities=20% Similarity=0.651 Sum_probs=10.5
Q ss_pred HHHhhhhheeccCCC
Q psy14697 58 AVVVGYCLYFDKKRR 72 (175)
Q Consensus 58 a~flGYcIYFD~KRR 72 (175)
..|.|.||||--|+|
T Consensus 21 ll~~glcI~ccvkcr 35 (70)
T 2klu_A 21 LLFIGLGIFFSVRSR 35 (70)
T ss_dssp HHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHhhHHH
Confidence 578999999654333
No 218
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=21.06 E-value=80 Score=20.94 Aligned_cols=16 Identities=13% Similarity=0.418 Sum_probs=9.4
Q ss_pred HHhhhhhe----eccCCCCC
Q psy14697 59 VVVGYCLY----FDKKRRSD 74 (175)
Q Consensus 59 ~flGYcIY----FD~KRR~d 74 (175)
+++-|+.| |.|||...
T Consensus 24 ~Lii~~LwK~GFFKR~~~~~ 43 (54)
T 2l8s_A 24 MLLILALWKIGFFKRPLKKK 43 (54)
T ss_dssp HHHHHHHHHHHHTTSCCSCC
T ss_pred HHHHHHHHHcCcccCCCcch
Confidence 34445555 88887643
No 219
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=20.76 E-value=82 Score=28.37 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=28.3
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCChHHHH
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQPNQLL 150 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~VcpqP~~LL 150 (175)
..+|..+...|++++|..+|-+|+...|+-.+.+
T Consensus 437 ~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~ 470 (681)
T 2pzi_A 437 LMEVRALLDLGDVAKATRKLDDLAERVGWRWRLV 470 (681)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHH
Confidence 4568888999999999999999999988765443
No 220
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A
Probab=20.17 E-value=1.1e+02 Score=24.11 Aligned_cols=17 Identities=24% Similarity=0.423 Sum_probs=12.5
Q ss_pred CCChhhHHHhHHHHHHh
Q psy14697 72 RSDPLFKEKLKERRRKN 88 (175)
Q Consensus 72 R~dP~FRKkLrerRrk~ 88 (175)
.+||+|++.+.+.|++-
T Consensus 197 ~~~~~~~~~~~~a~~e~ 213 (230)
T 2ipb_A 197 QTIPAFQKSLAKVREEL 213 (230)
T ss_dssp TTCHHHHHHHHHHHHHH
T ss_pred HcCHHHHHHHHHHHHHH
Confidence 38999999887655443
No 221
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=20.04 E-value=1.2e+02 Score=25.28 Aligned_cols=29 Identities=17% Similarity=0.039 Sum_probs=14.6
Q ss_pred HHhHhHHhhcCChhhHHHHHHHHHHhcCC
Q psy14697 117 IQLGETLLAAGDLDNGVEHLANALTVCGQ 145 (175)
Q Consensus 117 V~lGE~L~a~G~~~eaa~hf~nAl~Vcpq 145 (175)
+.+|-.|..+|+.++|..+|-+++..-|+
T Consensus 212 ~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 212 WYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 34444444455555555555555555544
No 222
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=20.02 E-value=73 Score=25.17 Aligned_cols=20 Identities=30% Similarity=0.288 Sum_probs=16.8
Q ss_pred CCCChhhHHHhHHHHHHhHH
Q psy14697 71 RRSDPLFKEKLKERRRKNRE 90 (175)
Q Consensus 71 RR~dP~FRKkLrerRrk~~~ 90 (175)
+.+||+.++||++.|+++++
T Consensus 124 ~~~d~~l~~kl~~~r~~~~~ 143 (157)
T 2ywx_A 124 ALKDENIAKKLIEYREKMKK 143 (157)
T ss_dssp TTTCHHHHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHHH
Confidence 67899999999998877654
Done!