Your job contains 1 sequence.
>psy14698
MSGGHYKVAQNYFIFNFQTKNAFELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDS
PLNRAGLLQVYIHTEKNVLIEVNPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKV
IKNPITQHLPVGVRKIGTSFSSSKLTKPADLVPADEPIVIVIGAMAHGQVDTDYTEGNIS
ISNFPLSAALTCTKLCSAFEEAWGVT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14698
(206 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1N832 - symbol:EMG1 "Uncharacterized protein" ... 693 2.7e-68 1
FB|FBgn0029714 - symbol:CG3527 species:7227 "Drosophila m... 691 4.4e-68 1
UNIPROTKB|F1N532 - symbol:EMG1 "Uncharacterized protein" ... 683 3.1e-67 1
UNIPROTKB|E2RKH8 - symbol:EMG1 "Uncharacterized protein" ... 683 3.1e-67 1
UNIPROTKB|I3LPQ4 - symbol:EMG1 "Uncharacterized protein" ... 681 5.1e-67 1
UNIPROTKB|Q92979 - symbol:EMG1 "Ribosomal RNA small subun... 680 6.5e-67 1
RGD|1307665 - symbol:Emg1 "EMG1 nucleolar protein homolog... 678 1.1e-66 1
MGI|MGI:1315195 - symbol:Emg1 "EMG1 nucleolar protein hom... 677 1.3e-66 1
ZFIN|ZDB-GENE-060421-2909 - symbol:zgc:136360 "zgc:136360... 670 7.4e-66 1
WB|WBGene00012652 - symbol:Y39A1A.14 species:6239 "Caenor... 540 4.4e-52 1
UNIPROTKB|Q9XX15 - symbol:Y39A1A.14 "Ribosomal RNA small ... 540 4.4e-52 1
UNIPROTKB|Q96UP2 - symbol:NEP1 "Ribosomal RNA small subun... 526 1.3e-50 1
SGD|S000004176 - symbol:EMG1 "Methyltransferase for rRNA"... 523 2.8e-50 1
CGD|CAL0001059 - symbol:NEP1 species:5476 "Candida albica... 515 2.0e-49 1
UNIPROTKB|Q59W59 - symbol:NEP1 "Putative uncharacterized ... 515 2.0e-49 1
POMBASE|SPAC18G6.07c - symbol:mra1 "rRNA (pseudouridine) ... 510 6.7e-49 1
ASPGD|ASPL0000035794 - symbol:AN2759 species:162425 "Emer... 504 2.9e-48 1
TAIR|locus:2080645 - symbol:AT3G57000 species:3702 "Arabi... 481 7.9e-46 1
DICTYBASE|DDB_G0272732 - symbol:emg1 "putative ribosome b... 445 5.2e-42 1
GENEDB_PFALCIPARUM|PF08_0041 - symbol:PF08_0041 "ribosome... 364 2.0e-33 1
UNIPROTKB|Q8IB49 - symbol:PF08_0041 "Ribosome biogenesis ... 364 2.0e-33 1
UNIPROTKB|Q57977 - symbol:nep1 "Ribosomal RNA small subun... 191 4.2e-15 1
>UNIPROTKB|F1N832 [details] [associations]
symbol:EMG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008168 "methyltransferase activity" evidence=IEA]
InterPro:IPR005304 Pfam:PF03587 GO:GO:0008168 GO:GO:0032259
PANTHER:PTHR12636 GeneTree:ENSGT00390000000305 OMA:THQSLLM
EMBL:AADN02061112 IPI:IPI00574378 Ensembl:ENSGALT00000023493
Uniprot:F1N832
Length = 238
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 134/183 (73%), Positives = 149/183 (81%)
Query: 23 FELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEV 82
FELLNCD H LL + GR+PG RPDI HQ LLMLMDSPLNRAGLLQVYIHT+KNVLIEV
Sbjct: 55 FELLNCDKHKALLLRSGRDPGEVRPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEV 114
Query: 83 NPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKIGTSFSS 142
NPQTRIPRTF RF GLMVQLLHK SVRA+D KLLKVIKNP++ HLPVG KIGTSF+
Sbjct: 115 NPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHLPVGCMKIGTSFAV 174
Query: 143 SKLTKPADLVPADEPIVIVIGAMAHGQVDTDYTEGNISISNFPLSAALTCTKLCSAFEEA 202
+T +LVP EP+ IV+GA AHG V+ DYTE ISISN+PLSAALTC K+ +AFEEA
Sbjct: 175 PNVTDLRELVPTAEPVTIVVGAFAHGSVNVDYTEKMISISNYPLSAALTCAKITTAFEEA 234
Query: 203 WGV 205
WGV
Sbjct: 235 WGV 237
>FB|FBgn0029714 [details] [associations]
symbol:CG3527 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=NAS] [GO:0042274 "ribosomal
small subunit biogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=NAS] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR005304 Pfam:PF03587 GO:GO:0005730 GO:GO:0022008
EMBL:AE014298 GO:GO:0042742 GO:GO:0019843 eggNOG:COG1756 KO:K14568
GO:GO:0070037 PANTHER:PTHR12636 GeneTree:ENSGT00390000000305
OMA:THQSLLM RefSeq:NP_572170.1 UniGene:Dm.17712
ProteinModelPortal:Q9W4J5 SMR:Q9W4J5 DIP:DIP-23557N
MINT:MINT-760426 STRING:Q9W4J5 PaxDb:Q9W4J5
EnsemblMetazoa:FBtr0070678 GeneID:31387 KEGG:dme:Dmel_CG3527
UCSC:CG3527-RA FlyBase:FBgn0029714 InParanoid:Q9W4J5
OrthoDB:EOG43J9MR PhylomeDB:Q9W4J5 GenomeRNAi:31387 NextBio:773388
Bgee:Q9W4J5 GermOnline:CG3527 Uniprot:Q9W4J5
Length = 252
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 132/193 (68%), Positives = 153/193 (79%)
Query: 21 NAFELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLI 80
N FELLNCDDH +++K+ R+PGSCRPDI HQCLLML DSPLNRAGLLQV++ TE NVLI
Sbjct: 59 NTFELLNCDDHAGIMRKNQRDPGSCRPDITHQCLLMLFDSPLNRAGLLQVFVRTEHNVLI 118
Query: 81 EVNPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKIGTSF 140
E+NPQTRIPRTFKRFAGLMVQLLHKF +RA+DS+ +L+ VIKNPIT H+PVG +K SF
Sbjct: 119 EINPQTRIPRTFKRFAGLMVQLLHKFQIRANDSSRRLMSVIKNPITDHVPVGCKKYAMSF 178
Query: 141 SSSKLTKPADLVPA--------DEPIVIVIGAMAHGQVDTDYTEGNISISNFPLSAALTC 192
S L DLVP DEP+VIVIGA AHG + TDYTE SISN+PLSAA+ C
Sbjct: 179 SGKLLPNCRDLVPHGDETSASYDEPVVIVIGAFAHGVLKTDYTEELFSISNYPLSAAIAC 238
Query: 193 TKLCSAFEEAWGV 205
+K+CSAFEE WGV
Sbjct: 239 SKICSAFEEVWGV 251
>UNIPROTKB|F1N532 [details] [associations]
symbol:EMG1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008168 "methyltransferase activity" evidence=IEA]
InterPro:IPR005304 Pfam:PF03587 GO:GO:0008168 GO:GO:0032259
KO:K14568 PANTHER:PTHR12636 GeneTree:ENSGT00390000000305
OMA:THQSLLM CTD:10436 EMBL:DAAA02014453 IPI:IPI00716727
RefSeq:NP_001039662.2 UniGene:Bt.111383 Ensembl:ENSBTAT00000017445
GeneID:515362 KEGG:bta:515362 NextBio:20871789 Uniprot:F1N532
Length = 244
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 130/183 (71%), Positives = 150/183 (81%)
Query: 23 FELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEV 82
+ELLNCD H +L K+GR+PG RPDI HQ LLMLMDSPLNRAGLLQVYIHT+KNVLIEV
Sbjct: 61 YELLNCDKHKSMLLKNGRDPGEVRPDIAHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEV 120
Query: 83 NPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKIGTSFSS 142
NPQTRIPRTF RF GLMVQLLHK SVRA+D KLLKVIKNP++ H PVG KIGTSFS
Sbjct: 121 NPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKIGTSFSV 180
Query: 143 SKLTKPADLVPADEPIVIVIGAMAHGQVDTDYTEGNISISNFPLSAALTCTKLCSAFEEA 202
++ +L P+ +PIV V+GA AHG+VD +YTE +SISN+PLSAALTC K+ +AFEEA
Sbjct: 181 PVVSDVRELAPSSDPIVFVVGAFAHGKVDVEYTEKMVSISNYPLSAALTCAKVTTAFEEA 240
Query: 203 WGV 205
WGV
Sbjct: 241 WGV 243
>UNIPROTKB|E2RKH8 [details] [associations]
symbol:EMG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] InterPro:IPR005304 Pfam:PF03587 GO:GO:0008168
GO:GO:0032259 KO:K14568 PANTHER:PTHR12636
GeneTree:ENSGT00390000000305 OMA:THQSLLM CTD:10436
EMBL:AAEX03015269 RefSeq:XP_853373.1 Ensembl:ENSCAFT00000022923
GeneID:477708 KEGG:cfa:477708 NextBio:20853136 Uniprot:E2RKH8
Length = 244
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 131/183 (71%), Positives = 149/183 (81%)
Query: 23 FELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEV 82
+ELLNCD H +L K+GR+PG RPDI HQ LLMLMDSPLNRAGLLQVYIHT+KNVLIEV
Sbjct: 61 YELLNCDKHKSVLLKNGRDPGEVRPDIAHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEV 120
Query: 83 NPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKIGTSFSS 142
NPQTRIPRTF RF GLMVQLLHK SVRA+D KLLKVIKNP++ H PVG KIGTSFS
Sbjct: 121 NPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKIGTSFSI 180
Query: 143 SKLTKPADLVPADEPIVIVIGAMAHGQVDTDYTEGNISISNFPLSAALTCTKLCSAFEEA 202
++ +LVP+ +PIV V+GA AHGQV +YTE +SISN+PLSAALTC KL +AFEE
Sbjct: 181 PVVSDVRELVPSSDPIVFVVGAFAHGQVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEV 240
Query: 203 WGV 205
WGV
Sbjct: 241 WGV 243
>UNIPROTKB|I3LPQ4 [details] [associations]
symbol:EMG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008168 "methyltransferase activity" evidence=IEA]
InterPro:IPR005304 Pfam:PF03587 GO:GO:0008168 GO:GO:0032259
PANTHER:PTHR12636 GeneTree:ENSGT00390000000305 OMA:THQSLLM
EMBL:FP325257 Ensembl:ENSSSCT00000025035 Uniprot:I3LPQ4
Length = 244
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 130/183 (71%), Positives = 149/183 (81%)
Query: 23 FELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEV 82
+ELLNCD H +L K+GR+PG RPDI HQ LLMLMDSPLNRAGLLQVYIHT+KNVLIEV
Sbjct: 61 YELLNCDKHKSMLLKNGRDPGEVRPDIAHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEV 120
Query: 83 NPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKIGTSFSS 142
NPQTRIPRTF RF GLMVQLLHK SVRA+D KLLKVIKNP++ H PVG KIGTSFS
Sbjct: 121 NPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKIGTSFSI 180
Query: 143 SKLTKPADLVPADEPIVIVIGAMAHGQVDTDYTEGNISISNFPLSAALTCTKLCSAFEEA 202
++ +LVP+ +P+V V+GA AHGQVD +YTE +SISN+PLSAALTC KL +AFEE
Sbjct: 181 PVVSDVRELVPSSDPVVFVVGAFAHGQVDVEYTEKMVSISNYPLSAALTCAKLTTAFEEV 240
Query: 203 WGV 205
W V
Sbjct: 241 WRV 243
>UNIPROTKB|Q92979 [details] [associations]
symbol:EMG1 "Ribosomal RNA small subunit methyltransferase
NEP1" species:9606 "Homo sapiens" [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0070037
"rRNA (pseudouridine) methyltransferase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISS] InterPro:IPR005304 Pfam:PF03587
GO:GO:0005737 GO:GO:0005730 GO:GO:0003723 GO:GO:0019843 EMBL:U47924
GO:GO:0042274 eggNOG:COG1756 HOGENOM:HOG000193819 KO:K14568
GO:GO:0070037 PANTHER:PTHR12636 EMBL:U72514 EMBL:BC055314
IPI:IPI00025347 RefSeq:NP_006322.4 UniGene:Hs.731673
ProteinModelPortal:Q92979 SMR:Q92979 IntAct:Q92979
MINT:MINT-1367632 STRING:Q92979 PhosphoSite:Q92979 DMDM:20532172
PaxDb:Q92979 PRIDE:Q92979 DNASU:10436 GeneID:10436 KEGG:hsa:10436
UCSC:uc001qsh.4 CTD:10436 GeneCards:GC12P007079 HGNC:HGNC:16912
MIM:211180 MIM:611531 neXtProt:NX_Q92979 Orphanet:1270
PharmGKB:PA142671909 HOVERGEN:HBG029983 InParanoid:Q92979
ChiTaRS:EMG1 GenomeRNAi:10436 NextBio:39554 CleanEx:HS_EMG1
Genevestigator:Q92979 GermOnline:ENSG00000126749 Uniprot:Q92979
Length = 244
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 129/183 (70%), Positives = 149/183 (81%)
Query: 23 FELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEV 82
+ELLNCD H +L K+GR+PG RPDI HQ LLMLMDSPLNRAGLLQVYIHT+KNVLIEV
Sbjct: 61 YELLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEV 120
Query: 83 NPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKIGTSFSS 142
NPQTRIPRTF RF GLMVQLLHK SVRA+D KLLKVIKNP++ H PVG K+GTSFS
Sbjct: 121 NPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFSI 180
Query: 143 SKLTKPADLVPADEPIVIVIGAMAHGQVDTDYTEGNISISNFPLSAALTCTKLCSAFEEA 202
++ +LVP+ +PIV V+GA AHG+V +YTE +SISN+PLSAALTC KL +AFEE
Sbjct: 181 PVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEV 240
Query: 203 WGV 205
WGV
Sbjct: 241 WGV 243
>RGD|1307665 [details] [associations]
symbol:Emg1 "EMG1 nucleolar protein homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0070037 "rRNA (pseudouridine)
methyltransferase activity" evidence=ISO] InterPro:IPR005304
Pfam:PF03587 RGD:1307665 GO:GO:0008168 GO:GO:0032259 EMBL:CH473964
KO:K14568 PANTHER:PTHR12636 GeneTree:ENSGT00390000000305
OMA:THQSLLM CTD:10436 OrthoDB:EOG43N7DH IPI:IPI00192021
RefSeq:NP_001101358.2 UniGene:Rn.162786 Ensembl:ENSRNOT00000017334
GeneID:312706 KEGG:rno:312706 UCSC:RGD:1307665 Uniprot:D3ZDS4
Length = 244
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 128/183 (69%), Positives = 149/183 (81%)
Query: 23 FELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEV 82
+ELLNCD H +L K+GR+PG RPDI HQ LLMLMDSPLNRAGLLQVYIHT+KNVLIEV
Sbjct: 61 YELLNCDKHKSMLLKNGRDPGEVRPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEV 120
Query: 83 NPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKIGTSFSS 142
NPQTRIPRTF RF GLMVQLLHK SVRA+D KLLKVIKNP++ H PVG KIGTSFS
Sbjct: 121 NPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKIGTSFSV 180
Query: 143 SKLTKPADLVPADEPIVIVIGAMAHGQVDTDYTEGNISISNFPLSAALTCTKLCSAFEEA 202
++ +LVP+ +P+V V+GA AHG+V +YTE +SISN+PLSAALTC K+ +AFEE
Sbjct: 181 EDISDIRELVPSSDPVVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKVTTAFEEV 240
Query: 203 WGV 205
WGV
Sbjct: 241 WGV 243
>MGI|MGI:1315195 [details] [associations]
symbol:Emg1 "EMG1 nucleolar protein homolog (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0032259 "methylation"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0070037 "rRNA (pseudouridine) methyltransferase activity"
evidence=ISO] InterPro:IPR005304 Pfam:PF03587 MGI:MGI:1315195
GO:GO:0005730 GO:GO:0019843 EMBL:AC002397 eggNOG:COG1756
HOGENOM:HOG000193819 KO:K14568 GO:GO:0070037 PANTHER:PTHR12636
OMA:THQSLLM CTD:10436 HOVERGEN:HBG029983 ChiTaRS:EMG1 EMBL:BC002004
IPI:IPI00127554 RefSeq:NP_038564.1 UniGene:Mm.6390
ProteinModelPortal:O35130 SMR:O35130 STRING:O35130
PhosphoSite:O35130 PaxDb:O35130 PRIDE:O35130 DNASU:14791
Ensembl:ENSMUST00000004379 GeneID:14791 KEGG:mmu:14791
InParanoid:O35130 OrthoDB:EOG43N7DH NextBio:286931 Bgee:O35130
CleanEx:MM_EMG1 Genevestigator:O35130 GermOnline:ENSMUSG00000004268
Uniprot:O35130
Length = 244
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 128/183 (69%), Positives = 149/183 (81%)
Query: 23 FELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEV 82
+ELLNCD H +L K+GR+PG RPDI HQ LLMLMDSPLNRAGLLQVYIHT+KNVLIEV
Sbjct: 61 YELLNCDRHKSMLLKNGRDPGEVRPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEV 120
Query: 83 NPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKIGTSFSS 142
NPQTRIPRTF RF GLMVQLLHK SVRA+D KLLKVIKNP++ H PVG KIGTSFS
Sbjct: 121 NPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKIGTSFSV 180
Query: 143 SKLTKPADLVPADEPIVIVIGAMAHGQVDTDYTEGNISISNFPLSAALTCTKLCSAFEEA 202
++ +LVP+ +P+V V+GA AHG+V +YTE +SISN+PLSAALTC K+ +AFEE
Sbjct: 181 EDISDIRELVPSSDPVVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKVTTAFEEV 240
Query: 203 WGV 205
WGV
Sbjct: 241 WGV 243
>ZFIN|ZDB-GENE-060421-2909 [details] [associations]
symbol:zgc:136360 "zgc:136360" species:7955 "Danio
rerio" [GO:0008168 "methyltransferase activity" evidence=IEA]
InterPro:IPR005304 Pfam:PF03587 ZFIN:ZDB-GENE-060421-2909
GO:GO:0008168 GO:GO:0032259 eggNOG:COG1756 HOGENOM:HOG000193819
KO:K14568 PANTHER:PTHR12636 HOVERGEN:HBG029983 OrthoDB:EOG43N7DH
EMBL:BC115095 IPI:IPI00759094 RefSeq:NP_001035427.1
UniGene:Dr.41525 ProteinModelPortal:Q1RM81 STRING:Q1RM81
PRIDE:Q1RM81 GeneID:678588 KEGG:dre:678588 InParanoid:Q1RM81
NextBio:20902413 Bgee:Q1RM81 Uniprot:Q1RM81
Length = 238
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 125/183 (68%), Positives = 143/183 (78%)
Query: 23 FELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEV 82
FELLNCD H ++ K GR+PG RPDI HQCLLML+DSPLNRAGLLQVYIHTEKNVLIE+
Sbjct: 55 FELLNCDQHKSMIIKSGRDPGKIRPDIAHQCLLMLLDSPLNRAGLLQVYIHTEKNVLIEI 114
Query: 83 NPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKIGTSFSS 142
NPQTRIPRTF RF GLMVQLLHK SVRA+D +LL++IKNP++ HLP G + TSF +
Sbjct: 115 NPQTRIPRTFARFCGLMVQLLHKLSVRAADGPQRLLRLIKNPVSDHLPPGCPRFSTSFKA 174
Query: 143 SKLTKPADLVPADEPIVIVIGAMAHGQVDTDYTEGNISISNFPLSAALTCTKLCSAFEEA 202
P +VP D P IVIGA AHG V+ DYTE +SISN+PLSAAL C K+CSAFEE
Sbjct: 175 GDAVCPRTIVPDDGPAAIVIGAFAHGAVNVDYTEKTVSISNYPLSAALACAKICSAFEEV 234
Query: 203 WGV 205
WGV
Sbjct: 235 WGV 237
>WB|WBGene00012652 [details] [associations]
symbol:Y39A1A.14 species:6239 "Caenorhabditis elegans"
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR005304 Pfam:PF03587 GO:GO:0009792
GO:GO:0040007 GO:GO:0005730 GO:GO:0002119 GO:GO:0000003
GO:GO:0019843 eggNOG:COG1756 HOGENOM:HOG000193819 KO:K14568
GO:GO:0070037 PANTHER:PTHR12636 EMBL:AL031633 PIR:T26736
RefSeq:NP_499349.1 ProteinModelPortal:Q9XX15 SMR:Q9XX15
STRING:Q9XX15 PaxDb:Q9XX15 EnsemblMetazoa:Y39A1A.14.1
EnsemblMetazoa:Y39A1A.14.2 GeneID:176488 KEGG:cel:CELE_Y39A1A.14
UCSC:Y39A1A.14 CTD:176488 WormBase:Y39A1A.14
GeneTree:ENSGT00390000000305 InParanoid:Q9XX15 OMA:THQSLLM
NextBio:892792 Uniprot:Q9XX15
Length = 231
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 103/202 (50%), Positives = 140/202 (69%)
Query: 6 YKVAQNYFIFNFQTKNAFELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRA 65
Y V + + + + +L+ D H L+K ++P RPDI+HQCLL L+DSPLNRA
Sbjct: 29 YVVLEGCSLETAKVGGEYAILSSDKHANFLRKQKKDPADYRPDILHQCLLNLLDSPLNRA 88
Query: 66 GLLQVYIHTEKNVLIEVNPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPI 125
G L+V+ T KNVL++V+PQ RIPRTF RF GLMVQLLHK S+RA+++ KL+ V+KNP+
Sbjct: 89 GKLRVFFRTSKNVLVDVSPQCRIPRTFDRFCGLMVQLLHKLSIRAAETTQKLMSVVKNPV 148
Query: 126 TQHLPVGVRKIGTSFSSSKLTKPADLV-P-ADEPIVIVIGAMAHGQVDTDYTEGNISISN 183
+ HLPVG RK+ SF+ +LT LV P DEP+V++IG +A G++ DY + ISN
Sbjct: 149 SNHLPVGSRKMLMSFNVPELTMANKLVAPETDEPLVLIIGGIARGKIVVDYNDSETKISN 208
Query: 184 FPLSAALTCTKLCSAFEEAWGV 205
+PLSAALTC K+ S EE WG+
Sbjct: 209 YPLSAALTCAKVTSGLEEIWGI 230
>UNIPROTKB|Q9XX15 [details] [associations]
symbol:Y39A1A.14 "Ribosomal RNA small subunit
methyltransferase nep-1" species:6239 "Caenorhabditis elegans"
[GO:0070037 "rRNA (pseudouridine) methyltransferase activity"
evidence=ISS] InterPro:IPR005304 Pfam:PF03587 GO:GO:0009792
GO:GO:0040007 GO:GO:0005730 GO:GO:0002119 GO:GO:0000003
GO:GO:0019843 eggNOG:COG1756 HOGENOM:HOG000193819 KO:K14568
GO:GO:0070037 PANTHER:PTHR12636 EMBL:AL031633 PIR:T26736
RefSeq:NP_499349.1 ProteinModelPortal:Q9XX15 SMR:Q9XX15
STRING:Q9XX15 PaxDb:Q9XX15 EnsemblMetazoa:Y39A1A.14.1
EnsemblMetazoa:Y39A1A.14.2 GeneID:176488 KEGG:cel:CELE_Y39A1A.14
UCSC:Y39A1A.14 CTD:176488 WormBase:Y39A1A.14
GeneTree:ENSGT00390000000305 InParanoid:Q9XX15 OMA:THQSLLM
NextBio:892792 Uniprot:Q9XX15
Length = 231
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 103/202 (50%), Positives = 140/202 (69%)
Query: 6 YKVAQNYFIFNFQTKNAFELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRA 65
Y V + + + + +L+ D H L+K ++P RPDI+HQCLL L+DSPLNRA
Sbjct: 29 YVVLEGCSLETAKVGGEYAILSSDKHANFLRKQKKDPADYRPDILHQCLLNLLDSPLNRA 88
Query: 66 GLLQVYIHTEKNVLIEVNPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPI 125
G L+V+ T KNVL++V+PQ RIPRTF RF GLMVQLLHK S+RA+++ KL+ V+KNP+
Sbjct: 89 GKLRVFFRTSKNVLVDVSPQCRIPRTFDRFCGLMVQLLHKLSIRAAETTQKLMSVVKNPV 148
Query: 126 TQHLPVGVRKIGTSFSSSKLTKPADLV-P-ADEPIVIVIGAMAHGQVDTDYTEGNISISN 183
+ HLPVG RK+ SF+ +LT LV P DEP+V++IG +A G++ DY + ISN
Sbjct: 149 SNHLPVGSRKMLMSFNVPELTMANKLVAPETDEPLVLIIGGIARGKIVVDYNDSETKISN 208
Query: 184 FPLSAALTCTKLCSAFEEAWGV 205
+PLSAALTC K+ S EE WG+
Sbjct: 209 YPLSAALTCAKVTSGLEEIWGI 230
>UNIPROTKB|Q96UP2 [details] [associations]
symbol:NEP1 "Ribosomal RNA small subunit methyltransferase
NEP1" species:284593 "Candida glabrata CBS 138" [GO:0070037 "rRNA
(pseudouridine) methyltransferase activity" evidence=ISS]
InterPro:IPR005304 Pfam:PF03587 GO:GO:0005730 GO:GO:0019843
HOGENOM:HOG000193819 KO:K14568 OrthoDB:EOG41K2N7 GO:GO:0070037
PANTHER:PTHR12636 OMA:THQSLLM EMBL:AY034788 EMBL:AY181247
EMBL:CR380948 RefSeq:XP_445023.1 ProteinModelPortal:Q96UP2
SMR:Q96UP2 GeneID:2886681 GenomeReviews:CR380948_GR
KEGG:cgr:CAGL0B01232g Uniprot:Q96UP2
Length = 229
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 99/184 (53%), Positives = 135/184 (73%)
Query: 25 LLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEVNP 84
LLNCDDH +L+K GR+ RPDI HQCLL L+DSP+N+AGLLQVYI T+KNVLIEVNP
Sbjct: 46 LLNCDDHQGILRKMGRDIAEARPDITHQCLLTLLDSPINKAGLLQVYILTKKNVLIEVNP 105
Query: 85 QTRIPRTFKRFAGLMVQLLHKFSVRASDS-NIKLLKVIKNPITQHLPVGVRKIGTSFSSS 143
RIPRTFKRF+GLMVQLLHK S+R+ +S N LL+V+KNP+T++LP RK+ SF +
Sbjct: 106 SVRIPRTFKRFSGLMVQLLHKLSIRSMESSNTHLLRVVKNPVTKYLPADCRKVTLSFDA- 164
Query: 144 KLTKPADLVPADEPIVIVIGAMA--HGQVDTDYTEGNISISNFPLSAALTCTKLCSAFEE 201
++ +P + + + + + +GAMA H +Y + I+ISN+PLSA++ C+K C E+
Sbjct: 165 EVMRPQEYLGDKQSVCVFVGAMARGHDSFADEYVDDKIAISNYPLSASVACSKFCHGAED 224
Query: 202 AWGV 205
AW +
Sbjct: 225 AWAI 228
>SGD|S000004176 [details] [associations]
symbol:EMG1 "Methyltransferase for rRNA" species:4932
"Saccharomyces cerevisiae" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0030686
"90S preribosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IGI;IMP] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005880 "nuclear microtubule" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0070475 "rRNA base methylation"
evidence=ISO;IMP] [GO:0070037 "rRNA (pseudouridine)
methyltransferase activity" evidence=ISO;IMP] InterPro:IPR005304
Pfam:PF03587 SGD:S000004176 GO:GO:0005737 GO:GO:0005730
EMBL:BK006945 GO:GO:0019843 EMBL:U17246 GO:GO:0005880 GO:GO:0030686
GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
eggNOG:COG1756 KO:K14568 OrthoDB:EOG41K2N7 GO:GO:0070037
GO:GO:0070475 PANTHER:PTHR12636 GeneTree:ENSGT00390000000305
OMA:THQSLLM EMBL:AY557941 PIR:S51431 RefSeq:NP_013287.1 PDB:2V3J
PDB:2V3K PDB:3OII PDB:3OIJ PDB:3OIN PDBsum:2V3J PDBsum:2V3K
PDBsum:3OII PDBsum:3OIJ PDBsum:3OIN ProteinModelPortal:Q06287
SMR:Q06287 DIP:DIP-6504N IntAct:Q06287 MINT:MINT-658100
STRING:Q06287 PaxDb:Q06287 PeptideAtlas:Q06287 EnsemblFungi:YLR186W
GeneID:850883 KEGG:sce:YLR186W CYGD:YLR186w
EvolutionaryTrace:Q06287 NextBio:967239 Genevestigator:Q06287
GermOnline:YLR186W Uniprot:Q06287
Length = 252
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 101/187 (54%), Positives = 132/187 (70%)
Query: 23 FELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEV 82
+ LLNCDDH LLKK GR+ RPDI HQCLL L+DSP+N+AG LQVYI T + +LIEV
Sbjct: 65 YVLLNCDDHQGLLKKMGRDISEARPDITHQCLLTLLDSPINKAGKLQVYIQTSRGILIEV 124
Query: 83 NPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKIGTSFSS 142
NP RIPRTFKRF+GLMVQLLHK S+R+ +S KLLKVIKNPIT HLP RK+ SF +
Sbjct: 125 NPTVRIPRTFKRFSGLMVQLLHKLSIRSVNSEEKLLKVIKNPITDHLPTKCRKVTLSFDA 184
Query: 143 S--KLTKPADLVPADEPIVIVIGAMAHGQVD--TDYTEGNISISNFPLSAALTCTKLCSA 198
++ + + DE I + +GAMA G+ + +Y + + +SN+PLSA++ C+K C
Sbjct: 185 PVIRVQDYIEKLDDDESICVFVGAMARGKDNFADEYVDEKVGLSNYPLSASVACSKFCHG 244
Query: 199 FEEAWGV 205
E+AW +
Sbjct: 245 AEDAWNI 251
>CGD|CAL0001059 [details] [associations]
symbol:NEP1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IGI;ISS] [GO:0030686 "90S preribosome" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005880
"nuclear microtubule" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0000747
"conjugation with cellular fusion" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR005304 Pfam:PF03587
CGD:CAL0001059 GO:GO:0005730 GO:GO:0042254 GO:GO:0008168
GO:GO:0032259 EMBL:AACQ01000117 EMBL:AACQ01000116 KO:K14568
PANTHER:PTHR12636 RefSeq:XP_713798.1 RefSeq:XP_713838.1
ProteinModelPortal:Q59W59 SMR:Q59W59 STRING:Q59W59 GeneID:3644526
GeneID:3644545 KEGG:cal:CaO19.665 KEGG:cal:CaO19.8282
Uniprot:Q59W59
Length = 267
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 102/188 (54%), Positives = 132/188 (70%)
Query: 23 FELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEV 82
F LLNCDDH LL+K GR+ RPDI HQCLL L+DSP+N+AG LQVYI T + VLIEV
Sbjct: 80 FALLNCDDHQGLLRKMGRDIAEARPDITHQCLLTLLDSPINKAGRLQVYIQTARGVLIEV 139
Query: 83 NPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKIGTSFSS 142
NP RIPRTFKRF+GLMVQLLHK S+R+ +S LLKVIKNPIT HLP RK+ SF +
Sbjct: 140 NPSVRIPRTFKRFSGLMVQLLHKLSIRSENSKEVLLKVIKNPITDHLPTKCRKVTLSFDA 199
Query: 143 SKLTKPADLVPA---DEPIVIVIGAMAHGQVD--TDYTEGNISISNFPLSAALTCTKLCS 197
+L + D V +E I + +GAMA G+ + ++ + I +S++PLSA++ C+K C
Sbjct: 200 -ELKRVQDYVTTLDENESICVFVGAMARGKDNFADEFVDEKIGLSDYPLSASVACSKFCH 258
Query: 198 AFEEAWGV 205
E+ WG+
Sbjct: 259 GCEDVWGI 266
>UNIPROTKB|Q59W59 [details] [associations]
symbol:NEP1 "Putative uncharacterized protein NEP1"
species:237561 "Candida albicans SC5314" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IGI]
InterPro:IPR005304 Pfam:PF03587 CGD:CAL0001059 GO:GO:0005730
GO:GO:0042254 GO:GO:0008168 GO:GO:0032259 EMBL:AACQ01000117
EMBL:AACQ01000116 KO:K14568 PANTHER:PTHR12636 RefSeq:XP_713798.1
RefSeq:XP_713838.1 ProteinModelPortal:Q59W59 SMR:Q59W59
STRING:Q59W59 GeneID:3644526 GeneID:3644545 KEGG:cal:CaO19.665
KEGG:cal:CaO19.8282 Uniprot:Q59W59
Length = 267
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 102/188 (54%), Positives = 132/188 (70%)
Query: 23 FELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEV 82
F LLNCDDH LL+K GR+ RPDI HQCLL L+DSP+N+AG LQVYI T + VLIEV
Sbjct: 80 FALLNCDDHQGLLRKMGRDIAEARPDITHQCLLTLLDSPINKAGRLQVYIQTARGVLIEV 139
Query: 83 NPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKIGTSFSS 142
NP RIPRTFKRF+GLMVQLLHK S+R+ +S LLKVIKNPIT HLP RK+ SF +
Sbjct: 140 NPSVRIPRTFKRFSGLMVQLLHKLSIRSENSKEVLLKVIKNPITDHLPTKCRKVTLSFDA 199
Query: 143 SKLTKPADLVPA---DEPIVIVIGAMAHGQVD--TDYTEGNISISNFPLSAALTCTKLCS 197
+L + D V +E I + +GAMA G+ + ++ + I +S++PLSA++ C+K C
Sbjct: 200 -ELKRVQDYVTTLDENESICVFVGAMARGKDNFADEFVDEKIGLSDYPLSASVACSKFCH 258
Query: 198 AFEEAWGV 205
E+ WG+
Sbjct: 259 GCEDVWGI 266
>POMBASE|SPAC18G6.07c [details] [associations]
symbol:mra1 "rRNA (pseudouridine) methyltransferase
Mra1" species:4896 "Schizosaccharomyces pombe" [GO:0000747
"conjugation with cellular fusion" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0019236 "response to
pheromone" evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=ISO] [GO:0042274
"ribosomal small subunit biogenesis" evidence=ISO] [GO:0070037
"rRNA (pseudouridine) methyltransferase activity" evidence=ISO;ISS]
[GO:0070475 "rRNA base methylation" evidence=ISO]
InterPro:IPR005304 Pfam:PF03587 PomBase:SPAC18G6.07c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0019843 GO:GO:0000747 GO:GO:0019236 GO:GO:0032040
GO:GO:0042274 EMBL:D78582 PIR:T37921 RefSeq:NP_593671.1
ProteinModelPortal:Q10107 SMR:Q10107 STRING:Q10107 PRIDE:Q10107
EnsemblFungi:SPAC18G6.07c.1 GeneID:2542139 KEGG:spo:SPAC18G6.07c
eggNOG:COG1756 HOGENOM:HOG000193819 KO:K14568 OrthoDB:EOG41K2N7
NextBio:20803211 GO:GO:0070037 GO:GO:0070475 PANTHER:PTHR12636
Uniprot:Q10107
Length = 359
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 105/193 (54%), Positives = 136/193 (70%)
Query: 18 QTKNA-FELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEK 76
+ K+A ++LLNCDDH +LKK R RPDI HQCLL L+DSPLN+AG LQVYIHT K
Sbjct: 166 KAKDAKYQLLNCDDHQGILKKLNRNIAQARPDITHQCLLTLLDSPLNKAGRLQVYIHTAK 225
Query: 77 NVLIEVNPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKI 136
VLIEVNP RIPRTFKRF+GLMVQLLHK S+R+ + N KLLKVIKNP+T +LP RK
Sbjct: 226 KVLIEVNPSVRIPRTFKRFSGLMVQLLHKLSIRSVNGNEKLLKVIKNPVTDYLPPNCRKA 285
Query: 137 GTSFSSSKLT--KPADLVPADEPIVIVIGAMAHGQVD-TD-YTEGNISISNFPLSAALTC 192
SF + + K + + ++ + I IGAMAHG D +D + + ISIS++PLSA++ C
Sbjct: 286 TLSFDAPTVPPRKYLETLQPNQSVCIAIGAMAHGPDDFSDGWVDEKISISDYPLSASIAC 345
Query: 193 TKLCSAFEEAWGV 205
+K + E+ G+
Sbjct: 346 SKFLHSMEDFLGI 358
>ASPGD|ASPL0000035794 [details] [associations]
symbol:AN2759 species:162425 "Emericella nidulans"
[GO:0000747 "conjugation with cellular fusion" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0070475 "rRNA
base methylation" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005880
"nuclear microtubule" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0070037 "rRNA (pseudouridine) methyltransferase activity"
evidence=IEA] InterPro:IPR005304 Pfam:PF03587 GO:GO:0005737
GO:GO:0005730 EMBL:BN001306 GO:GO:0003723 GO:GO:0008168
GO:GO:0032259 GO:GO:0005880 GO:GO:0030686 EMBL:AACD01000049
GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
eggNOG:COG1756 HOGENOM:HOG000193819 KO:K14568 OrthoDB:EOG41K2N7
PANTHER:PTHR12636 OMA:THQSLLM RefSeq:XP_660363.1
ProteinModelPortal:Q5B9M1 SMR:Q5B9M1 STRING:Q5B9M1
EnsemblFungi:CADANIAT00010350 GeneID:2874369 KEGG:ani:AN2759.2
Uniprot:Q5B9M1
Length = 260
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 102/188 (54%), Positives = 132/188 (70%)
Query: 23 FELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEV 82
+ LLN D+H +++K R+ RPDI HQCLL L+DSP+N+AG LQ+YIHT K VLIEV
Sbjct: 73 YSLLNSDEHIGVMRKMNRDISEARPDITHQCLLTLLDSPVNKAGKLQIYIHTAKGVLIEV 132
Query: 83 NPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKIGTSFSS 142
NP RIPRTFKRFAGLMVQLLH+ S+R+++S KLLKVIKNPIT HLP RK+ S+ +
Sbjct: 133 NPSVRIPRTFKRFAGLMVQLLHRLSIRSTNSQEKLLKVIKNPITDHLPPNCRKVTLSYEA 192
Query: 143 SKLTKPADLVPA---DEPIVIVIGAMAHGQVD-TD-YTEGNISISNFPLSAALTCTKLCS 197
+ + D + + E I I +GAMA GQ D D + + ISISN+ LSA++ C+K C
Sbjct: 193 P-VVRVKDYIESLGPKESICIFVGAMAKGQDDFADSFKDDTISISNYSLSASVACSKFCH 251
Query: 198 AFEEAWGV 205
A EE W +
Sbjct: 252 AAEEVWDI 259
>TAIR|locus:2080645 [details] [associations]
symbol:AT3G57000 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0006626 "protein targeting to
mitochondrion" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0034968 "histone lysine methylation" evidence=RCA]
InterPro:IPR005304 Pfam:PF03587 EMBL:CP002686 GO:GO:0008168
EMBL:AL138655 KO:K14568 PANTHER:PTHR12636 EMBL:BT004815
EMBL:AK227852 IPI:IPI00538779 PIR:T47760 RefSeq:NP_191259.1
UniGene:At.43946 ProteinModelPortal:Q9M1J8 SMR:Q9M1J8 STRING:Q9M1J8
PRIDE:Q9M1J8 EnsemblPlants:AT3G57000.1 GeneID:824867
KEGG:ath:AT3G57000 TAIR:At3g57000 InParanoid:Q9M1J8 OMA:CISRICE
PhylomeDB:Q9M1J8 ProtClustDB:CLSN2684529 Genevestigator:Q9M1J8
Uniprot:Q9M1J8
Length = 298
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 96/189 (50%), Positives = 126/189 (66%)
Query: 23 FELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQ-VYIHTEKNVLIE 81
++LLN DDH LKK+ R P RPDI HQ LLM++DSP+N+AG L+ VY+ TEK VL E
Sbjct: 109 YQLLNSDDHANFLKKNNRNPADYRPDITHQALLMILDSPVNKAGRLKAVYVRTEKGVLFE 168
Query: 82 VNPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQH-LPVGVRKIGTSF 140
V P RIPRTFKRFAG+M+QLL K S+ A +S KLL+ +KNPI +H LPV +IG S
Sbjct: 169 VKPHVRIPRTFKRFAGIMLQLLQKLSITAVNSREKLLRCVKNPIEEHHLPVNSHRIGFSH 228
Query: 141 SSSKLTKP----ADLVPADEPIVIVIGAMAHGQVDTDYTEGNISISNFPLSAALTCTKLC 196
SS KL A + D V V+GAMAHG++D +Y + +S+S +PLSAA +++C
Sbjct: 229 SSEKLVNMQKHLATVCDDDRDTVFVVGAMAHGKIDCNYIDEFVSVSEYPLSAAYCISRIC 288
Query: 197 SAFEEAWGV 205
A W +
Sbjct: 289 EALATNWNI 297
>DICTYBASE|DDB_G0272732 [details] [associations]
symbol:emg1 "putative ribosome biogenesis protein"
species:44689 "Dictyostelium discoideum" [GO:0032259 "methylation"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=ISS] [GO:0030515 "snoRNA binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] InterPro:IPR005304 Pfam:PF03587
dictyBase:DDB_G0272732 GO:GO:0005737 GO:GO:0005730 GO:GO:0030515
GenomeReviews:CM000151_GR EMBL:AAFI02000008 GO:GO:0008168
GO:GO:0032259 GO:GO:0042274 eggNOG:COG1756 KO:K14568
PANTHER:PTHR12636 RefSeq:XP_644981.1 ProteinModelPortal:Q7KWM6
SMR:Q7KWM6 STRING:Q7KWM6 EnsemblProtists:DDB0238378 GeneID:8618658
KEGG:ddi:DDB_G0272732 OMA:VIGAMST Uniprot:Q7KWM6
Length = 338
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 97/187 (51%), Positives = 122/187 (65%)
Query: 18 QTKNAFELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKN 77
+ K +F+LLNCDDH +LKK G+E RPDI+HQCLL L DSPLN+AGLLQV+I T KN
Sbjct: 29 KVKESFQLLNCDDHADILKKHGKEASEARPDILHQCLLALFDSPLNKAGLLQVFIKTTKN 88
Query: 78 VLIEVNPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKIG 137
VLIEV+PQTRIPRTF RFAGLMVQLL K S+RA++ KL KVIKNPIT HL G +
Sbjct: 89 VLIEVHPQTRIPRTFNRFAGLMVQLLKKLSIRATNGPDKLFKVIKNPITDHLAPGTKIYA 148
Query: 138 TSFSSSKLTKPADLVP---ADEPI-VIVIGAMAHGQVDTDYTEGNISISNFPLSAALTCT 193
TSFS+ K + VP +P+ VI + G T N ++++ +L
Sbjct: 149 TSFSAPKCVDLFEFVPEIFGYDPLPVIPVSTTPTGVALGSSTNNNNNVNSIQSLNSLGGA 208
Query: 194 KLCSAFE 200
++ SA E
Sbjct: 209 QVRSAGE 215
Score = 125 (49.1 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 144 KLTKPADLVPADEPIVIVIGAMAHGQVDTDYTEGNISISNFPLSAALTCTKLCSAFEEAW 203
K K +D + + + IVIGAM+ G + +Y I+ SN+PLSAA C K+ + FE W
Sbjct: 276 KPEKKSDQLNGLQQVCIVIGAMSTGAMKIEYKHEEIAFSNYPLSAAGACFKITTVFERQW 335
Query: 204 GV 205
G+
Sbjct: 336 GI 337
>GENEDB_PFALCIPARUM|PF08_0041 [details] [associations]
symbol:PF08_0041 "ribosome biogenesis protein
nep1 homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR005304
Pfam:PF03587 GO:GO:0042254 GO:GO:0008168 GO:GO:0032259
EMBL:AL844507 HOGENOM:HOG000193819 KO:K14568 PANTHER:PTHR12636
OMA:THQSLLM RefSeq:XP_001349310.1 ProteinModelPortal:Q8IB49
IntAct:Q8IB49 MINT:MINT-1568361 EnsemblProtists:PF08_0041:mRNA
GeneID:2655492 KEGG:pfa:PF08_0041 EuPathDB:PlasmoDB:PF3D7_0821500
ProtClustDB:CLSZ2433261 Uniprot:Q8IB49
Length = 279
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 78/191 (40%), Positives = 113/191 (59%)
Query: 23 FELLNCDDHGYLLKK---DGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVL 79
+EL N H +LKK D + RPDI+HQCL+ L++SPLN+ G LQ+YI T N L
Sbjct: 88 YELANSRKHKNILKKNKVDEENIKNFRPDILHQCLIHLLESPLNKFGYLQIYIKTHDNQL 147
Query: 80 IEVNPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKIGTS 139
V+ +IP+TF++F LMV L K+ ++A++ NI LLK+IKN + LP+ KIG S
Sbjct: 148 FYVSSNLKIPKTFQQFESLMVTFLRKYKIKANEKNIYLLKIIKNDLQNILPINGHKIGLS 207
Query: 140 FSSSK--LTKPADLVP-ADEPIVIVIGAMAHGQ--VDTDYTEGNISISNFPLSAALTCTK 194
K L + ++P+ IGA+A+ + + NISIS+F LSAA+ C+
Sbjct: 208 LKGKKVELNNYIKVYKNTNQPVTFFIGAVAYSNPTMKLQILDDNISISDFSLSAAMCCSS 267
Query: 195 LCSAFEEAWGV 205
+CS FE W +
Sbjct: 268 ICSEFEHLWNL 278
>UNIPROTKB|Q8IB49 [details] [associations]
symbol:PF08_0041 "Ribosome biogenesis protein nep1
homologue, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR005304
Pfam:PF03587 GO:GO:0042254 GO:GO:0008168 GO:GO:0032259
EMBL:AL844507 HOGENOM:HOG000193819 KO:K14568 PANTHER:PTHR12636
OMA:THQSLLM RefSeq:XP_001349310.1 ProteinModelPortal:Q8IB49
IntAct:Q8IB49 MINT:MINT-1568361 EnsemblProtists:PF08_0041:mRNA
GeneID:2655492 KEGG:pfa:PF08_0041 EuPathDB:PlasmoDB:PF3D7_0821500
ProtClustDB:CLSZ2433261 Uniprot:Q8IB49
Length = 279
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 78/191 (40%), Positives = 113/191 (59%)
Query: 23 FELLNCDDHGYLLKK---DGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVL 79
+EL N H +LKK D + RPDI+HQCL+ L++SPLN+ G LQ+YI T N L
Sbjct: 88 YELANSRKHKNILKKNKVDEENIKNFRPDILHQCLIHLLESPLNKFGYLQIYIKTHDNQL 147
Query: 80 IEVNPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHLPVGVRKIGTS 139
V+ +IP+TF++F LMV L K+ ++A++ NI LLK+IKN + LP+ KIG S
Sbjct: 148 FYVSSNLKIPKTFQQFESLMVTFLRKYKIKANEKNIYLLKIIKNDLQNILPINGHKIGLS 207
Query: 140 FSSSK--LTKPADLVP-ADEPIVIVIGAMAHGQ--VDTDYTEGNISISNFPLSAALTCTK 194
K L + ++P+ IGA+A+ + + NISIS+F LSAA+ C+
Sbjct: 208 LKGKKVELNNYIKVYKNTNQPVTFFIGAVAYSNPTMKLQILDDNISISDFSLSAAMCCSS 267
Query: 195 LCSAFEEAWGV 205
+CS FE W +
Sbjct: 268 ICSEFEHLWNL 278
>UNIPROTKB|Q57977 [details] [associations]
symbol:nep1 "Ribosomal RNA small subunit methyltransferase
Nep1" species:243232 "Methanocaldococcus jannaschii DSM 2661"
[GO:0019843 "rRNA binding" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0070037 "rRNA
(pseudouridine) methyltransferase activity" evidence=IDA]
HAMAP:MF_00554 InterPro:IPR005304 InterPro:IPR023503 Pfam:PF03587
GO:GO:0042803 GO:GO:0019843 EMBL:L77117 GenomeReviews:L77117_GR
eggNOG:COG1756 KO:K14568 GO:GO:0070037 PANTHER:PTHR12636 PIR:E64369
RefSeq:NP_247536.1 PDB:3BBD PDB:3BBE PDB:3BBH PDBsum:3BBD
PDBsum:3BBE PDBsum:3BBH ProteinModelPortal:Q57977 SMR:Q57977
GeneID:1451422 KEGG:mja:MJ_0557 OMA:SPINHEK ProtClustDB:PRK04171
EvolutionaryTrace:Q57977 Uniprot:Q57977
Length = 205
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 54/180 (30%), Positives = 94/180 (52%)
Query: 23 FELLNCDDHGYLLKKDGREPGSCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEV 82
+++L+ + H ++K + RPDI+H LL ++DSP+N L +YIHT + ++++
Sbjct: 31 YDILDSNYHYKAMEKLKDKEMRGRPDIIHISLLNILDSPINHEKKLNIYIHTYDDKVLKI 90
Query: 83 NPQTRIPRTFKRFAGLMVQLLHKFSVRASDSNIKLLKVIKNPITQHL-PVGVRKIGTSFS 141
NP+TR+PR + RF G+M ++L + N L+K+ + + L + +KI
Sbjct: 91 NPETRLPRNYFRFLGVMEKVLK------GERN-HLIKMEEKTLEDLLNEINAKKIAIMTK 143
Query: 142 SSKLTKPADLVPADEPIVIVIGAMAHGQ--VDTDYTEGNI---SISNFPLSAALTCTKLC 196
+ KLT P L D +IG +G+ ++ + G+I SI N L A C +C
Sbjct: 144 TGKLTHPKLLKEYD---TFIIGGFPYGKLKINKEKVFGDIKEISIYNKGLMAWTVCGIIC 200
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 206 206 0.00097 111 3 11 22 0.46 32
31 0.47 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 601 (64 KB)
Total size of DFA: 171 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.03u 0.09s 19.12t Elapsed: 00:00:20
Total cpu time: 19.03u 0.09s 19.12t Elapsed: 00:00:22
Start: Thu Aug 15 13:42:11 2013 End: Thu Aug 15 13:42:33 2013