BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy147
(378 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P301|YIF1B_XENTR Protein YIF1B OS=Xenopus tropicalis GN=yif1b PE=2 SV=1
Length = 300
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/274 (42%), Positives = 177/274 (64%), Gaps = 27/274 (9%)
Query: 99 PQQATNFPGIPAGYTDIISNPLVSNVMKEYGKNIIESAGGQMLGQ-------VGGLKYYF 151
P ++ GIPA +S P+ SN YG ++ S G +M+ + V +KYYF
Sbjct: 44 PNHSSPALGIPA--QAFLSEPM-SNFAMAYGSSL-ASQGKEMMDKNIDRIIPVSKIKYYF 99
Query: 152 AVDTRYVMKKLKLILFPFLHKEWSVQYEQDQPVQPRYEINAPDLYIPTMAYVTYILLAGL 211
AVDT YV KK+ L++FP++H++W V+Y+QD PV PR++INAPDLYIP MA++TYIL+AGL
Sbjct: 100 AVDTVYVGKKIGLLMFPYMHQDWEVRYQQDTPVAPRFDINAPDLYIPVMAFITYILVAGL 159
Query: 212 VLGIQNRFSPEKLGMHASTATGCALVELVLQYIFLYVTNIQSNLKTWDLLSYSGYKYVGI 271
LG Q+RFSPE LGM AS+A +VE++ + LY+ + ++L T DL+++SGYKYVG+
Sbjct: 160 ALGTQSRFSPEILGMQASSALAWLIVEVLAILLSLYLVTVNTDLTTVDLVAFSGYKYVGM 219
Query: 272 ILAILVGQLFQWTGYLVSISYCGLALAFFMMRSLKSRVMETPVQHGGVAQTDIYGQPVPP 331
I ++ G LF TGY V +S+CG+++ FFM+R+L+ +++ G
Sbjct: 220 ISGVISGLLFGKTGYYVVLSWCGISVVFFMIRTLRLKILSEAAAEG-------------- 265
Query: 332 QMLQGTKR--RMYFLVFVALSQPVLMLWVSYHLI 363
+++G + RMY + +A QP+ M W++YHL+
Sbjct: 266 VLVRGARNQLRMYLTMAIAAVQPIFMYWLTYHLV 299
>sp|Q4FZQ0|YF1BB_XENLA Protein YIF1B-B OS=Xenopus laevis GN=yif1b-b PE=2 SV=1
Length = 300
Score = 223 bits (569), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/274 (41%), Positives = 176/274 (64%), Gaps = 27/274 (9%)
Query: 99 PQQATNFPGIPAGYTDIISNPLVSNVMKEYGKNIIESAGGQMLGQ-------VGGLKYYF 151
P ++ GIPA +S P+ SN YG ++ S G +M+ + V +KYYF
Sbjct: 44 PNHSSPALGIPA--QAFLSEPM-SNFAMAYGSSL-ASQGKEMMDKNIDRIIPVSKIKYYF 99
Query: 152 AVDTRYVMKKLKLILFPFLHKEWSVQYEQDQPVQPRYEINAPDLYIPTMAYVTYILLAGL 211
AVDT YV KK+ L++FP++H++W V+Y+QD PV PR++INAPDLYIP MA++TYIL+AGL
Sbjct: 100 AVDTVYVGKKIGLLMFPYMHQDWEVRYQQDTPVAPRFDINAPDLYIPVMAFITYILVAGL 159
Query: 212 VLGIQNRFSPEKLGMHASTATGCALVELVLQYIFLYVTNIQSNLKTWDLLSYSGYKYVGI 271
LG Q+RFSPE LGM AS+A +VE++ + LY+ + ++L T DL+++SGYKYVG+
Sbjct: 160 ALGTQSRFSPEILGMQASSALAWLIVEVLAILLSLYLVTVNTDLTTVDLVAFSGYKYVGM 219
Query: 272 ILAILVGQLFQWTGYLVSISYCGLALAFFMMRSLKSRVMETPVQHGGVAQTDIYGQPVPP 331
I ++ G LF TGY V +++C +++ FFM+R+L+ +++ G
Sbjct: 220 ISGVIAGLLFGNTGYYVVLAWCCISIVFFMIRTLRLKILSEAAAEG-------------- 265
Query: 332 QMLQGTKR--RMYFLVFVALSQPVLMLWVSYHLI 363
+++G + RMY + +A QP+ M W++YHL+
Sbjct: 266 VLVRGARNQLRMYLTMAIAAVQPIFMYWLTYHLV 299
>sp|Q6GN58|YF1BA_XENLA Protein YIF1B-A OS=Xenopus laevis GN=yif1b-a PE=2 SV=1
Length = 300
Score = 222 bits (566), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 113/274 (41%), Positives = 176/274 (64%), Gaps = 27/274 (9%)
Query: 99 PQQATNFPGIPAGYTDIISNPLVSNVMKEYGKNIIESAGGQMLGQ-------VGGLKYYF 151
P ++ GIPA +S P+ SN YG ++ S G +M+ + V +KYYF
Sbjct: 44 PNHSSPALGIPA--QAFLSEPM-SNFAMAYGSSL-ASQGKEMMDKNIDRIIPVSKIKYYF 99
Query: 152 AVDTRYVMKKLKLILFPFLHKEWSVQYEQDQPVQPRYEINAPDLYIPTMAYVTYILLAGL 211
AVDT YV KK+ L++FP++H++W V+Y+QD PV PR++INAPDLYIP MA+VTYIL+AGL
Sbjct: 100 AVDTVYVGKKIGLLMFPYMHQDWEVRYQQDTPVAPRFDINAPDLYIPVMAFVTYILVAGL 159
Query: 212 VLGIQNRFSPEKLGMHASTATGCALVELVLQYIFLYVTNIQSNLKTWDLLSYSGYKYVGI 271
LG Q+RFSPE LGM AS+A +VE++ + LY+ + ++L T DL++++GYKYVG+
Sbjct: 160 ALGTQSRFSPEILGMQASSALAWLIVEVLAILLSLYLVTVNTDLTTVDLVAFTGYKYVGM 219
Query: 272 ILAILVGQLFQWTGYLVSISYCGLALAFFMMRSLKSRVMETPVQHGGVAQTDIYGQPVPP 331
I ++ G LF TGY + +++C +++ FFM+R+L+ +++ G
Sbjct: 220 ISGVISGLLFGKTGYYIVLAWCCISIVFFMIRTLRLKILSEAAAEG-------------- 265
Query: 332 QMLQGTKR--RMYFLVFVALSQPVLMLWVSYHLI 363
+++G + RMY + +A QP+ M W++YHL+
Sbjct: 266 VLVRGARNQLRMYLTMAIAAVQPIFMYWLTYHLV 299
>sp|Q9CX30|YIF1B_MOUSE Protein YIF1B OS=Mus musculus GN=Yif1b PE=2 SV=2
Length = 311
Score = 212 bits (539), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 167/252 (66%), Gaps = 24/252 (9%)
Query: 121 VSNVMKEYGKNIIESAGGQMLGQ-------VGGLKYYFAVDTRYVMKKLKLILFPFLHKE 173
+SN+ YG ++ + G +++ + V LKYYFAVDT YV KKL L++FP+LH++
Sbjct: 74 MSNMAMVYGSSL-AAQGKELVDKNIDRFIPVSKLKYYFAVDTVYVGKKLGLLVFPYLHQD 132
Query: 174 WSVQYEQDQPVQPRYEINAPDLYIPTMAYVTYILLAGLVLGIQNRFSPEKLGMHASTATG 233
W VQY+QD PV PR++INAPDLYIP MA++TYIL+AGL LG Q+RFSP+ LG+ AS+A
Sbjct: 133 WEVQYQQDTPVAPRFDINAPDLYIPAMAFITYILVAGLALGTQDRFSPDLLGLQASSALA 192
Query: 234 CALVELVLQYIFLYVTNIQSNLKTWDLLSYSGYKYVGIILAILVGQLFQWTGYLVSISYC 293
+E+V + LY+ + ++L T DL+++ GYKYVG+I +L G LF GY + +++C
Sbjct: 193 WLTLEVVAILLSLYLVTVNTDLTTIDLVAFLGYKYVGMIGGVLTGLLFGKIGYYLVLAWC 252
Query: 294 GLALAFFMMRSLKSRVMETPVQHGGVAQTDIYGQPVPPQMLQGTKR--RMYFLVFVALSQ 351
+++ FM+R+L+ +++ AQ G PV +G + RMY + VA +Q
Sbjct: 253 CVSIFVFMIRTLRLKIL---------AQAAAEGVPV-----RGARNQLRMYLTMAVAAAQ 298
Query: 352 PVLMLWVSYHLI 363
PVLM W+++HL+
Sbjct: 299 PVLMYWLTFHLV 310
>sp|Q5U3G6|YIF1B_DANRE Protein YIF1B OS=Danio rerio GN=yif1b PE=2 SV=2
Length = 304
Score = 211 bits (538), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 175/274 (63%), Gaps = 26/274 (9%)
Query: 99 PQQATNFPGIPAGYTDIISNPLVSNVMKEYGKNIIESAGGQMLGQ-------VGGLKYYF 151
P + P + +G +++S+P+ SN+ YG ++ S G +M+ + + LKYYF
Sbjct: 47 PGRVGKSPDVFSG-QNLLSDPM-SNLAMAYGSSL-ASHGKEMMDKNLDRFIPISKLKYYF 103
Query: 152 AVDTRYVMKKLKLILFPFLHKEWSVQYEQDQPVQPRYEINAPDLYIPTMAYVTYILLAGL 211
AVDT YV KKL L++FP++H W V Y+QD PV PR++INAPDLYIP M ++TY+L+AGL
Sbjct: 104 AVDTVYVGKKLGLLVFPYMHDNWEVNYQQDTPVAPRFDINAPDLYIPVMGFITYVLVAGL 163
Query: 212 VLGIQNRFSPEKLGMHASTATGCALVELVLQYIFLYVTNIQSNLKTWDLLSYSGYKYVGI 271
LG QNRFSPE LG+ AS+A ++E++ + LY+ + ++L T DL+++SGYKYVG+
Sbjct: 164 ALGTQNRFSPEILGIQASSALVWLIIEVLAVLLSLYLVTVNTDLTTIDLVAFSGYKYVGM 223
Query: 272 ILAILVGQLFQWTGYLVSISYCGLALAFFMMRSLKSRVMETPVQHGGVAQTDIYGQPVPP 331
I+ ++ G LF TGY +++ + ++ F +R+L+ +++ G
Sbjct: 224 IVGVVAGLLFGRTGYYLALLWFCASIFVFTIRTLRLKILSEAAAEG-------------- 269
Query: 332 QMLQGTKR--RMYFLVFVALSQPVLMLWVSYHLI 363
++++GTK RMY + +A +QPV M W+++HL+
Sbjct: 270 RLVRGTKNQLRMYLTMAIAAAQPVFMYWLTFHLV 303
>sp|Q6PC24|YIF1A_DANRE Protein YIF1A OS=Danio rerio GN=yif1a PE=2 SV=1
Length = 307
Score = 211 bits (537), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 109/260 (41%), Positives = 169/260 (65%), Gaps = 14/260 (5%)
Query: 106 PGIPAGYTDIISNP--LVSNVMKEYGKNIIESAGGQMLGQVGGLKYYFAVDTRYVMKKLK 163
PG+ + D ++N + + + GK+I+ + + V LKY+FAVDT+YVMKKL
Sbjct: 59 PGVGNIFADPMANAAMMYGSTLANQGKDIVNKEINRFM-SVNKLKYFFAVDTKYVMKKLL 117
Query: 164 LILFPFLHKEWSVQYEQDQPVQPRYEINAPDLYIPTMAYVTYILLAGLVLGIQNRFSPEK 223
L++FP+ H++W V+Y +D P+ PR+++NAPDLYIPTMA++TYILLAG+ LGIQ RFSPE
Sbjct: 118 LLMFPYTHQDWEVRYHRDTPLTPRHDVNAPDLYIPTMAFITYILLAGMALGIQKRFSPEV 177
Query: 224 LGMHASTATGCALVELVLQYIFLYVTNIQSNLKTWDLLSYSGYKYVGIILAILVGQLFQW 283
LG+ ASTA ++E+++ + LY+ + ++L T+DL++YSGYKYVG+IL + G LF
Sbjct: 178 LGLCASTALVWMIIEVLVMLLSLYLLTVHTDLSTFDLVAYSGYKYVGMILTVFCGLLFGS 237
Query: 284 TGYLVSISYCGLALAFFMMRSLKSRVMETPVQHGGVAQTDIYGQPVPPQMLQGTKRRMYF 343
GY V++++ AL FF++RSLK +++ + A G P+ R+Y
Sbjct: 238 DGYYVALAWSSCALMFFIVRSLKMKILSSISADSMGA-----GASAKPRF------RLYI 286
Query: 344 LVFVALSQPVLMLWVSYHLI 363
V A QP ++ W++ HL+
Sbjct: 287 TVASAAFQPFIIYWLTAHLV 306
>sp|Q5BJH7|YIF1B_HUMAN Protein YIF1B OS=Homo sapiens GN=YIF1B PE=1 SV=1
Length = 314
Score = 209 bits (531), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 171/264 (64%), Gaps = 25/264 (9%)
Query: 109 PAGYTDIISNPLVSNVMKEYGKNIIESAGGQMLGQ-------VGGLKYYFAVDTRYVMKK 161
P + +++P VSN+ YG ++ + G +++ + + LKYYFAVDT YV +K
Sbjct: 66 PTPHAAFLADP-VSNMAMAYGSSL-AAQGKELVDKNIDRFIPITKLKYYFAVDTMYVGRK 123
Query: 162 LKLILFPFLHKEWSVQYEQDQPVQPRYEINAPDLYIPTMAYVTYILLAGLVLGIQNRFSP 221
L L+ FP+LH++W VQY+QD PV PR+++NAPDLYIP MA++TY+L+AGL LG Q+RFSP
Sbjct: 124 LGLLFFPYLHQDWEVQYQQDTPVAPRFDVNAPDLYIPAMAFITYVLVAGLALGTQDRFSP 183
Query: 222 EKLGMHASTATGCALVELVLQYIFLYVTNIQSNLKTWDLLSYSGYKYVGIILAILVGQLF 281
+ LG+ AS+A +E++ + LY+ + ++L T DL+++ GYKYVG+I +L+G LF
Sbjct: 184 DLLGLQASSALAWLTLEVLAILLSLYLVTVNTDLTTIDLVAFLGYKYVGMIGGVLMGLLF 243
Query: 282 QWTGYLVSISYCGLALAFFMMRSLKSRVMETPVQHGGVAQTDIYGQPVPPQMLQGTKR-- 339
GY + + +C +A+ FM+R+L+ +++ G VP ++G +
Sbjct: 244 GKIGYYLVLGWCCVAIFVFMIRTLRLKILADAAAEG-----------VP---VRGARNQL 289
Query: 340 RMYFLVFVALSQPVLMLWVSYHLI 363
RMY + VA +QP+LM W+++HL+
Sbjct: 290 RMYLTMAVAAAQPMLMYWLTFHLV 313
>sp|Q3T196|YIF1A_BOVIN Protein YIF1A OS=Bos taurus GN=YIF1A PE=2 SV=1
Length = 293
Score = 207 bits (528), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 110/256 (42%), Positives = 167/256 (65%), Gaps = 24/256 (9%)
Query: 115 IISNPLVSNVMKEYGKNIIESAGGQMLGQ-------VGGLKYYFAVDTRYVMKKLKLILF 167
++ +P+ +N+ YG +I S G M+ + V LKY+FAVDT YV KKL L++F
Sbjct: 54 LLGDPM-ANMAMAYGSSI-ASHGKDMMNKELHRFVSVNKLKYFFAVDTAYVAKKLGLLVF 111
Query: 168 PFLHKEWSVQYEQDQPVQPRYEINAPDLYIPTMAYVTYILLAGLVLGIQNRFSPEKLGMH 227
P+ H+ W VQY +D P+ PR ++NAPDLYIPTMA++TY+LLAG+ LGIQ RFSPE LG+
Sbjct: 112 PYTHQNWEVQYSRDVPLPPRQDLNAPDLYIPTMAFITYVLLAGMALGIQKRFSPEVLGLC 171
Query: 228 ASTATGCALVELVLQYIFLYVTNIQSNLKTWDLLSYSGYKYVGIILAILVGQLFQWTGYL 287
ASTA ++E++ + +Y+ ++S+L T+ LL+YSGYKYVG+IL++L G LF GY
Sbjct: 172 ASTALVWVVMEVLALLLGIYLATVRSDLSTFHLLAYSGYKYVGMILSVLTGLLFGSDGYY 231
Query: 288 VSISYCGLALAFFMMRSLKSRVMETPVQHGGVAQTDIYGQPVPPQMLQGTKRRMYFLVFV 347
V++++ AL +F++RSL++ + D G P P Q LQ +Y +
Sbjct: 232 VALAWTSSALMYFIVRSLRTAAL----------GPDSMGGPAPRQRLQ-----LYLTLGA 276
Query: 348 ALSQPVLMLWVSYHLI 363
A QP+++ W+++HL+
Sbjct: 277 AAFQPLIIYWLTFHLV 292
>sp|O95070|YIF1A_HUMAN Protein YIF1A OS=Homo sapiens GN=YIF1A PE=1 SV=2
Length = 293
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 181/303 (59%), Gaps = 28/303 (9%)
Query: 72 YNTYNAPNQFQPQLQPQQQFAQTPFMMPQQATNFPGIPA----GYTDIISNPLVSNVMKE 127
Y + + ++ + P F T Q +P A ++ +P+ +NV
Sbjct: 7 YGAHGSKHRARAAPDPPPLFDDTSGGYSSQPGGYPATGADVAFSVNHLLGDPM-ANVAMA 65
Query: 128 YGKNIIESAGGQMLGQ-------VGGLKYYFAVDTRYVMKKLKLILFPFLHKEWSVQYEQ 180
YG +I S G M+ + V LKY+FAVDT YV KKL L++FP+ H+ W VQY +
Sbjct: 66 YGSSI-ASHGKDMVHKELHRFVSVSKLKYFFAVDTAYVAKKLGLLVFPYTHQNWEVQYSR 124
Query: 181 DQPVQPRYEINAPDLYIPTMAYVTYILLAGLVLGIQNRFSPEKLGMHASTATGCALVELV 240
D P+ PR ++NAPDLYIPTMA++TY+LLAG+ LGIQ RFSPE LG+ ASTA ++E++
Sbjct: 125 DAPLPPRQDLNAPDLYIPTMAFITYVLLAGMALGIQKRFSPEVLGLCASTALVWVVMEVL 184
Query: 241 LQYIFLYVTNIQSNLKTWDLLSYSGYKYVGIILAILVGQLFQWTGYLVSISYCGLALAFF 300
+ LY+ ++S+L T+ LL+YSGYKYVG+IL++L G LF GY V++++ AL +F
Sbjct: 185 ALLLGLYLATVRSDLSTFHLLAYSGYKYVGMILSVLTGLLFGSDGYYVALAWTSSALMYF 244
Query: 301 MMRSLKSRVMETPVQHGGVAQTDIYGQPVPPQMLQGTKRRMYFLVFVALSQPVLMLWVSY 360
++RSL++ + D G PVP Q LQ +Y + A QP+++ W+++
Sbjct: 245 IVRSLRTAAL----------GPDSMGGPVPRQRLQ-----LYLTLGAAAFQPLIIYWLTF 289
Query: 361 HLI 363
HL+
Sbjct: 290 HLV 292
>sp|Q91XB7|YIF1A_MOUSE Protein YIF1A OS=Mus musculus GN=Yif1a PE=2 SV=1
Length = 293
Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 178/304 (58%), Gaps = 26/304 (8%)
Query: 70 NMYNTYNAPNQFQPQLQPQQQFAQTPFMMPQQATNFPGIPAGYTDIISNPL---VSNVMK 126
+ Y + + ++ + P F T Q +P A ++N L V+N+
Sbjct: 5 SAYGVHGSKHRTRAAPDPPPLFDDTSGGYSSQLGGYPAPGADVAFSVNNLLGDPVANMAM 64
Query: 127 EYGKNIIESAGGQMLGQ-------VGGLKYYFAVDTRYVMKKLKLILFPFLHKEWSVQYE 179
YG +I S G ++ + V LKY+FAVDT YV KKL L++FP+ H+ W +QY
Sbjct: 65 AYGTSI-ASQGKDIVHKELHRFVSVNKLKYFFAVDTAYVAKKLGLLVFPYTHQNWKMQYS 123
Query: 180 QDQPVQPRYEINAPDLYIPTMAYVTYILLAGLVLGIQNRFSPEKLGMHASTATGCALVEL 239
D P+ PR ++NAPDLYIPTMA++TY+LLAG+ LGIQ RFSPE LG+ ASTA +E+
Sbjct: 124 HDVPLPPRKDLNAPDLYIPTMAFITYVLLAGMALGIQQRFSPEVLGLCASTALVWVFMEV 183
Query: 240 VLQYIFLYVTNIQSNLKTWDLLSYSGYKYVGIILAILVGQLFQWTGYLVSISYCGLALAF 299
+ + LY+ ++S L T+ LL+YSGYKYVG+IL++L G LF GY V++++ AL +
Sbjct: 184 LALLLGLYLATVRSELSTFHLLAYSGYKYVGMILSVLTGLLFGSDGYYVALAWTSSALMY 243
Query: 300 FMMRSLKSRVMETPVQHGGVAQTDIYGQPVPPQMLQGTKRRMYFLVFVALSQPVLMLWVS 359
F++RSL++ + D G P P Q LQ +Y + A QP+++ W++
Sbjct: 244 FIVRSLRT----------AASGPDSMGGPAPRQRLQ-----LYLTLGAAAFQPLIIYWLT 288
Query: 360 YHLI 363
+HL+
Sbjct: 289 FHLV 292
>sp|Q6PEC3|YIF1B_RAT Protein YIF1B OS=Rattus norvegicus GN=Yif1b PE=2 SV=2
Length = 259
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 132/252 (52%), Gaps = 76/252 (30%)
Query: 121 VSNVMKEYGKNIIESAGGQMLGQ-------VGGLKYYFAVDTRYVMKKLKLILFPFLHKE 173
+SN+ YG ++ + G +++ + V LKYYFAVDT YV KKL L++FP+LH++
Sbjct: 74 MSNMAMAYGSSL-AAQGKELVDKNIDRFIPVSKLKYYFAVDTVYVGKKLGLLVFPYLHQD 132
Query: 174 WSVQYEQDQPVQPRYEINAPDLYIPTMAYVTYILLAGLVLGIQNRFSPEKLGMHASTATG 233
W VQY+QD PV PR++INAPDLYIP MA++TYIL+AGL LG Q+R
Sbjct: 133 WEVQYQQDTPVAPRFDINAPDLYIPAMAFITYILVAGLALGTQDR--------------- 177
Query: 234 CALVELVLQYIFLYVTNIQSNLKTWDLLSYSGYKYVGIILAILVGQLFQWTGYLVSISYC 293
+I +L G LF GY + +++C
Sbjct: 178 -------------------------------------MIGGVLTGLLFGKIGYYLVLAWC 200
Query: 294 GLALAFFMMRSLKSRVMETPVQHGGVAQTDIYGQPVPPQMLQGTKR--RMYFLVFVALSQ 351
+++ FM+R+L+ +++ AQ G PV +G + RMY + VA +Q
Sbjct: 201 CVSIFVFMIRTLRLKIL---------AQAAAEGVPV-----RGARNQLRMYLTMAVAAAQ 246
Query: 352 PVLMLWVSYHLI 363
PVLM W+++HL+
Sbjct: 247 PVLMYWLTFHLV 258
>sp|P87148|YIF1_SCHPO Protein transport protein yif1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hrf1 PE=3 SV=1
Length = 293
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 126/236 (53%), Gaps = 23/236 (9%)
Query: 129 GKNIIESAGGQMLGQVGGLKYYFAVDTRYVMKKLKLILFPFLHKEWSVQYEQDQP----- 183
G+ +E G+ L L +YF V YV+ KL LI+FP+ + W+ + + +
Sbjct: 68 GQEYVEQNFGKWLSTTR-LHHYFTVTNSYVVAKLLLIIFPWRRRSWARKLRRSEINGSAE 126
Query: 184 --VQPRYEINAPDLYIPTMAYVTYILLAGLVLGIQNRFSPEKLGMHASTATGCALVELVL 241
P ++N+PD+YIP MA+ T+ILL + G+Q+ F PE G+ AS A LVE +
Sbjct: 127 GYCPPAEDLNSPDMYIPLMAFTTHILLLCALAGLQDDFQPELFGLRASKACAVVLVEFLA 186
Query: 242 QYIFLYVTNIQSNLKTWDLLSYSGYKYVGIILAILVGQLFQ--WTGYLVSISYCGLALAF 299
+ Y+ NI S + DLL++SGYK+VG+IL L +LF+ W V + Y LA AF
Sbjct: 187 TRLGCYLLNISSQSQVLDLLAFSGYKFVGLILTSL-SKLFEMPWVTRFVFL-YMYLATAF 244
Query: 300 FMMRSLKSRVMETPVQHGGVAQTDIYGQPVPPQMLQGTKRRMYFLVFVALSQPVLM 355
F++RSLK V+ P + T Q RR+YFL F+A SQ + M
Sbjct: 245 FLLRSLKYAVL--PESTMAINATITSHQ---------RSRRIYFLFFIAASQILFM 289
>sp|P53845|YIF1_YEAST Protein transport protein YIF1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YIF1 PE=1 SV=1
Length = 314
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 127/269 (47%), Gaps = 19/269 (7%)
Query: 95 PFMMPQQATNFPGIPAGYTDIISNPLVSNVMKEYGKNIIESAGGQMLGQVGGLKYYFAVD 154
PF P+ + F + +++ I + + K +AG Q + YF V
Sbjct: 58 PFQDPRGSMAFQLGQSAFSNFIGQDNFNQFQETVNKATANAAGSQQIST------YFQVS 111
Query: 155 TRYVMKKLKLILFPFLH--KEWSVQYEQDQPVQPRYEINAPDLYIPTMAYVTYILLAGLV 212
TRYV+ KLKLIL PFL+ K W + + PR ++N+PD+Y+P M VTYIL+
Sbjct: 112 TRYVINKLKLILVPFLNGTKNWQRIMDSGNFLPPRDDVNSPDMYMPIMGLVTYILIWNTQ 171
Query: 213 LGIQNRFSPEKL--GMHASTATGCALVELVLQYIFLYVTNIQSNLKTWDLLSYSGYKYVG 270
G++ F+PE L + ++ A C + ++ ++L + + + +LL Y GYK+V
Sbjct: 172 QGLKGSFNPEDLYYKLSSTLAFVCLDLLILKLGLYLLIDSKIPSFSLVELLCYVGYKFVP 231
Query: 271 IILAILVGQLFQWTGYLVSIS-YCGLALAFFMMRSLKSRVMETPVQHGGVAQTDIYGQPV 329
+ILA L+ + + I Y +A F++RS+K ++ G DI+
Sbjct: 232 LILAQLLTNVTMPFNLNILIKFYLFIAFGVFLLRSVKFNLLS----RSGAEDDDIHVSIS 287
Query: 330 PPQMLQGTKRRMYFLVFVALSQPVLMLWV 358
+ K+ YFL +++W+
Sbjct: 288 KSTV----KKCNYFLFVYGFIWQNVLMWL 312
>sp|Q2IBB2|CTTB2_RHIFE Cortactin-binding protein 2 OS=Rhinolophus ferrumequinum GN=CTTNBP2
PE=3 SV=1
Length = 1663
Score = 34.3 bits (77), Expect = 1.4, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 11/127 (8%)
Query: 27 KDGPAMTSTPYQTYNPPPPPGFSVTPQLNDDWAQDATPQFQSANMYNTYNAPN---QFQP 83
++GP+ S P T + PP P + P + A PQ S ++ ++P+ P
Sbjct: 383 ENGPSTDSAPDLTNSTPPVPSSTAPPAMQ---TPGAAPQSHSQAPLHSLHSPSANASLHP 439
Query: 84 QLQPQQQFAQTPFMM----PQQATNFPGIPAGYTDIISNPLVSNVMKEYGKNIIESAGGQ 139
L P+ Q A+ F P Q N P D+ + V K+ +N + A +
Sbjct: 440 GLNPRIQAARFRFQGNANDPDQNGNTTQSPPS-RDVSPTSRDNLVAKQLARNTVTQALSR 498
Query: 140 MLGQVGG 146
G G
Sbjct: 499 FTGPPAG 505
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,260,322
Number of Sequences: 539616
Number of extensions: 6563432
Number of successful extensions: 19044
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 18762
Number of HSP's gapped (non-prelim): 303
length of query: 378
length of database: 191,569,459
effective HSP length: 119
effective length of query: 259
effective length of database: 127,355,155
effective search space: 32984985145
effective search space used: 32984985145
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)