BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14700
(159 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 89.4 bits (220), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 81/135 (60%), Gaps = 3/135 (2%)
Query: 15 KLETLEDAVVLEDSDNDE--LQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTML 72
KL+ ++ + + N + LQ G AY +PE+++ + Y G AD+WS+G++LY ++
Sbjct: 146 KLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKS-YLGSEADVWSMGILLYVLM 204
Query: 73 VGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
G PF+D +L+ KI RG++ P LS + L++ +L+ DP +R+S ++ L+HPW+
Sbjct: 205 CGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWI 264
Query: 133 RESRDSSPETQTYSP 147
+ + E Q+ +P
Sbjct: 265 MQDYNYPVEWQSKNP 279
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLF 87
+D + L+ G P Y +PE++ Y+G D+WS G++LY MLVGR PF+D +LF
Sbjct: 159 TDGNFLKTSCGSPNYAAPEVINGKL-YAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF 217
Query: 88 LKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
K++ ++ PD LS A+ LIR ++ DP +R++ ++ PW
Sbjct: 218 KKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWF 262
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y+SPE+LR A G+ D+W+ GVILY +LVG PF D + L+ +I G +
Sbjct: 168 GTPGYLSPEVLRKEA--YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDF 225
Query: 98 P----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
P DT++ +AK LI +L +P++R+++ + L HPW+
Sbjct: 226 PSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 83.6 bits (205), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLF 87
SD + L+D G P Y +PE++ S Y+G D+WS GVILY +L G PF+D +LF
Sbjct: 162 SDGEFLRDSCGSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLF 220
Query: 88 LKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
KI G F P+ L+ L+ +L+ DP +R + +D H W ++
Sbjct: 221 KKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 67/121 (55%), Gaps = 3/121 (2%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLF 87
SD + L+ G P Y +PE++ S Y+G D+WS GVILY +L G PF+D +LF
Sbjct: 167 SDGEFLRXSCGSPNYAAPEVI-SGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLF 225
Query: 88 LKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES--RDSSPETQTY 145
KI G F TP L+ L++ +L+ DP +R + +D H W ++ + PE +Y
Sbjct: 226 KKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSY 285
Query: 146 S 146
S
Sbjct: 286 S 286
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y+SPE+LR G+ DMW+ GVILY +LVG PF D + L+ +I G +
Sbjct: 168 GTPGYLSPEVLRKDPY--GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 98 P----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
P DT++ +AK LI +L +P++R+++ + L HPW+
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y+SPE+LR G+ DMW+ GVILY +LVG PF D + L+ +I G +
Sbjct: 168 GTPGYLSPEVLRKDP--YGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 98 P----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
P DT++ +AK LI +L +P++R+++ + L HPW+
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLF 87
SD + L+ G P Y +PE++ S Y+G D+WS GVILY +L G PF+D +LF
Sbjct: 162 SDGEFLRTSCGSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLF 220
Query: 88 LKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
KI G F P+ L+ L+ +L+ DP +R + +D H W ++
Sbjct: 221 KKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y+SPE+LR G+ D+W+ GVILY +LVG PF D + L+ +I G +
Sbjct: 186 GTPGYLSPEVLRKDP--YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 243
Query: 98 P----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
P DT++ +AK LI +L +PS+R+++ + L HPW+
Sbjct: 244 PSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y+SPE+LR G+ D+W+ GVILY +LVG PF D + L+ +I G +
Sbjct: 195 GTPGYLSPEVLRKDP--YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDF 252
Query: 98 P----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
P DT++ +AK LI +L +P++R++++ L HPW+
Sbjct: 253 PSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWV 291
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 6/108 (5%)
Query: 29 DNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFL 88
N + G P YV+PE+L + YS +A D WS+GVI Y +L G PF + + LF
Sbjct: 160 QNGIMSTACGTPGYVAPEVL-AQKPYS-KAVDCWSIGVITYILLCGYPPFYEETESKLFE 217
Query: 89 KISRG--QFITP--DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
KI G +F +P D +S AK I LL +DP+ER + E L HPW+
Sbjct: 218 KIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWI 265
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 80.5 bits (197), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 6/99 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y+SPE+LR G+ D+W+ GVILY +LVG PF D + L+ +I G +
Sbjct: 175 GTPGYLSPEVLRKDP--YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 232
Query: 98 P----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
P DT++ +AK LI +L +PS+R+++ + L HPW+
Sbjct: 233 PSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQ--F 95
G P YV+PE+L + YS +A D WS+GVI Y +L G PF D LF +I + + F
Sbjct: 180 GTPGYVAPEVL-AQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF 237
Query: 96 ITP--DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
+P D +S AK IR L+ +DP +R + E L HPW+
Sbjct: 238 DSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 80.1 bits (196), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQ--F 95
G P YV+PE+L + YS +A D WS+GVI Y +L G PF D LF +I + + F
Sbjct: 180 GTPGYVAPEVL-AQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF 237
Query: 96 ITP--DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
+P D +S AK IR L+ +DP +R + E L HPW+
Sbjct: 238 DSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQ--F 95
G P YV+PE+L + YS +A D WS+GVI Y +L G PF D LF +I + + F
Sbjct: 180 GTPGYVAPEVL-AQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF 237
Query: 96 ITP--DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
+P D +S AK IR L+ +DP +R + E L HPW+
Sbjct: 238 DSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 64/106 (60%), Gaps = 4/106 (3%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y+SPEI A G +D+WSLG + YT+L+GR PF+ + K+ +
Sbjct: 174 GTPNYISPEIATRSAH--GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM 231
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQ 143
P LS +AK LI LLRR+P++RLS L HP++ SR+SS +++
Sbjct: 232 PSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM--SRNSSTKSK 275
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 79.7 bits (195), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 58/99 (58%), Gaps = 6/99 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQ--F 95
G P YV+PE+L + YS +A D WS+GVI Y +L G PF D LF +I + + F
Sbjct: 180 GTPGYVAPEVL-AQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF 237
Query: 96 ITP--DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
+P D +S AK IR L+ +DP +R + E L HPW+
Sbjct: 238 DSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 79.3 bits (194), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 34 QDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK---- 89
+D G PAY++PE+L Y G+ AD+WS GV LY MLVG YPF D E F K
Sbjct: 174 KDTVGTPAYIAPEVLLK-KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHR 232
Query: 90 ISRGQFITPDTLSSKAKC--LIRSLLRRDPSERLSSEDTLHHPWL 132
I Q+ PD + +C LI + DP++R+S + +H W
Sbjct: 233 ILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLF 87
SD ++ G P Y++PE+L + GRA D W LGV++Y M+ GR PF + +H LF
Sbjct: 162 SDGATMKXFCGTPEYLAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 219
Query: 88 LKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSS 123
I + P TLS +AK L+ LL++DP +RL
Sbjct: 220 ELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGG 255
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLF 87
SD ++ G P Y++PE+L + GRA D W LGV++Y M+ GR PF + +H LF
Sbjct: 157 SDGATMKXFCGTPEYLAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
Query: 88 LKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSS 123
I + P TLS +AK L+ LL++DP +RL
Sbjct: 215 ELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGG 250
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 70/130 (53%), Gaps = 15/130 (11%)
Query: 6 RVIVIRDSIKLETL----EDAVVLED--------SDNDELQDKRGCPAYVSPEILRSHAR 53
R +V RD IKLE L + + + D SD ++ G P Y++PE+L +
Sbjct: 124 RDVVYRD-IKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND- 181
Query: 54 YSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLL 113
GRA D W LGV++Y M+ GR PF + +H LF I + P TLS +AK L+ LL
Sbjct: 182 -YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
Query: 114 RRDPSERLSS 123
++DP +RL
Sbjct: 241 KKDPKQRLGG 250
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 70/130 (53%), Gaps = 15/130 (11%)
Query: 6 RVIVIRDSIKLETL----EDAVVLED--------SDNDELQDKRGCPAYVSPEILRSHAR 53
R +V RD IKLE L + + + D SD ++ G P Y++PE+L +
Sbjct: 124 RDVVYRD-IKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND- 181
Query: 54 YSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLL 113
GRA D W LGV++Y M+ GR PF + +H LF I + P TLS +AK L+ LL
Sbjct: 182 -YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
Query: 114 RRDPSERLSS 123
++DP +RL
Sbjct: 241 KKDPKQRLGG 250
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 70/130 (53%), Gaps = 15/130 (11%)
Query: 6 RVIVIRDSIKLETL----EDAVVLED--------SDNDELQDKRGCPAYVSPEILRSHAR 53
R +V RD IKLE L + + + D SD ++ G P Y++PE+L +
Sbjct: 124 RDVVYRD-IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND- 181
Query: 54 YSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLL 113
GRA D W LGV++Y M+ GR PF + +H LF I + P TLS +AK L+ LL
Sbjct: 182 -YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
Query: 114 RRDPSERLSS 123
++DP +RL
Sbjct: 241 KKDPKQRLGG 250
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 70/130 (53%), Gaps = 15/130 (11%)
Query: 6 RVIVIRDSIKLETL----EDAVVLED--------SDNDELQDKRGCPAYVSPEILRSHAR 53
R +V RD IKLE L + + + D SD ++ G P Y++PE+L +
Sbjct: 124 RDVVYRD-IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND- 181
Query: 54 YSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLL 113
GRA D W LGV++Y M+ GR PF + +H LF I + P TLS +AK L+ LL
Sbjct: 182 -YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 240
Query: 114 RRDPSERLSS 123
++DP +RL
Sbjct: 241 KKDPKQRLGG 250
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 70/130 (53%), Gaps = 15/130 (11%)
Query: 6 RVIVIRDSIKLETL----EDAVVLED--------SDNDELQDKRGCPAYVSPEILRSHAR 53
R +V RD IKLE L + + + D SD ++ G P Y++PE+L +
Sbjct: 127 RDVVYRD-IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND- 184
Query: 54 YSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLL 113
GRA D W LGV++Y M+ GR PF + +H LF I + P TLS +AK L+ LL
Sbjct: 185 -YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 243
Query: 114 RRDPSERLSS 123
++DP +RL
Sbjct: 244 KKDPKQRLGG 253
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK----ISRG 93
G PAY++PE+L Y G+ AD+WS GV LY MLVG YPF D E F K I
Sbjct: 178 GTPAYIAPEVLLK-KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 94 QFITPDTLSSKAKC--LIRSLLRRDPSERLSSEDTLHHPWL 132
Q+ PD + +C LI + DP++R+S + +H W
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Query: 27 DSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSL 86
+ D + G P YV+PE+L + YS +A D WS+GVI Y +L G PF D + L
Sbjct: 173 EGKGDVMSTACGTPGYVAPEVL-AQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDSKL 230
Query: 87 FLKISRG--QFITP--DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
F +I + +F +P D +S AK IR+L+ +DP++R + E HPW+
Sbjct: 231 FEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK----ISRG 93
G PAY++PE+L Y G+ AD+WS GV LY MLVG YPF D E F K I
Sbjct: 178 GTPAYIAPEVLLK-KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 94 QFITPDTLSSKAKC--LIRSLLRRDPSERLSSEDTLHHPWL 132
Q+ PD + +C LI + DP++R+S + +H W
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK----ISRG 93
G PAY++PE+L Y G+ AD+WS GV LY MLVG YPF D E F K I
Sbjct: 177 GTPAYIAPEVLLK-KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 235
Query: 94 QFITPDTLSSKAKC--LIRSLLRRDPSERLSSEDTLHHPWL 132
Q+ PD + +C LI + DP++R+S + +H W
Sbjct: 236 QYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK----ISRG 93
G PAY++PE+L Y G+ AD+WS GV LY MLVG YPF D E F K I
Sbjct: 178 GTPAYIAPEVLLK-KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 94 QFITPDTLSSKAKC--LIRSLLRRDPSERLSSEDTLHHPWL 132
Q+ PD + +C LI + DP++R+S + +H W
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLF 87
+D + L+ G P Y +PE++ S Y+G D+WS GVILY ML R PF+D LF
Sbjct: 163 TDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF 221
Query: 88 LKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
IS G + P LS A LI+ +L +P R+S + + W +
Sbjct: 222 KNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLF 87
+D + L+ G P Y +PE++ S Y+G D+WS GVILY ML R PF+D LF
Sbjct: 158 TDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF 216
Query: 88 LKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
IS G + P LS A LI+ +L +P R+S + + W +
Sbjct: 217 KNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLF 87
+D + L+ G P Y +PE++ S Y+G D+WS GVILY ML R PF+D LF
Sbjct: 164 TDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF 222
Query: 88 LKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
IS G + P LS A LI+ +L +P R+S + + W +
Sbjct: 223 KNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLF 87
+D + L+ G P Y +PE++ S Y+G D+WS GVILY ML R PF+D LF
Sbjct: 154 TDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF 212
Query: 88 LKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
IS G + P LS A LI+ +L +P R+S + + W +
Sbjct: 213 KNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
Query: 22 AVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDS 81
+ +E +D++ G P Y+SPE+L+ YS + D+W+ GVILY +LVG PF D
Sbjct: 153 GLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP-YS-KPVDIWACGVILYILLVGYPPFWDE 210
Query: 82 EHTSLFLKISRGQFITP----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
+ L+ +I G + P DT++ +AK LI S+L +P +R++++ L PW+
Sbjct: 211 DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
Query: 22 AVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDS 81
+ +E +D++ G P Y+SPE+L+ YS + D+W+ GVILY +LVG PF D
Sbjct: 176 GLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP-YS-KPVDIWACGVILYILLVGYPPFWDE 233
Query: 82 EHTSLFLKISRGQFITP----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
+ L+ +I G + P DT++ +AK LI S+L +P +R++++ L PW+
Sbjct: 234 DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
Query: 22 AVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDS 81
+ +E +D++ G P Y+SPE+L+ YS + D+W+ GVILY +LVG PF D
Sbjct: 152 GLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP-YS-KPVDIWACGVILYILLVGYPPFWDE 209
Query: 82 EHTSLFLKISRGQFITP----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
+ L+ +I G + P DT++ +AK LI S+L +P +R++++ L PW+
Sbjct: 210 DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
Query: 22 AVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDS 81
+ +E +D++ G P Y+SPE+L+ YS + D+W+ GVILY +LVG PF D
Sbjct: 153 GLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP-YS-KPVDIWACGVILYILLVGYPPFWDE 210
Query: 82 EHTSLFLKISRGQFITP----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
+ L+ +I G + P DT++ +AK LI S+L +P +R++++ L PW+
Sbjct: 211 DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PE+L + GRA D W LGV++Y M+ GR PF + +H LF I +
Sbjct: 314 GTPEYLAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 371
Query: 98 PDTLSSKAKCLIRSLLRRDPSERL--SSEDT 126
P TL +AK L+ LL++DP +RL SED
Sbjct: 372 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDA 402
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PE+L + GRA D W LGV++Y M+ GR PF + +H LF I +
Sbjct: 311 GTPEYLAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 368
Query: 98 PDTLSSKAKCLIRSLLRRDPSERL--SSEDT 126
P TL +AK L+ LL++DP +RL SED
Sbjct: 369 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDA 399
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PE+L + GRA D W LGV++Y M+ GR PF + +H LF I +
Sbjct: 173 GTPEYLAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 230
Query: 98 PDTLSSKAKCLIRSLLRRDPSERL--SSEDT 126
P TL +AK L+ LL++DP +RL SED
Sbjct: 231 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDA 261
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PE+L + GRA D W LGV++Y M+ GR PF + +H LF I +
Sbjct: 171 GTPEYLAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 228
Query: 98 PDTLSSKAKCLIRSLLRRDPSERL--SSEDT 126
P TL +AK L+ LL++DP +RL SED
Sbjct: 229 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDA 259
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 76.6 bits (187), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PE+L + GRA D W LGV++Y M+ GR PF + +H LF I +
Sbjct: 172 GTPEYLAPEVLEDND--YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 229
Query: 98 PDTLSSKAKCLIRSLLRRDPSERL--SSEDT 126
P TL +AK L+ LL++DP +RL SED
Sbjct: 230 PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDA 260
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Query: 33 LQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISR 92
++ K G P YVSP++L G D WS GV++Y +L G PF+ + LKI
Sbjct: 165 MRTKVGTPYYVSPQVLEG---LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE 221
Query: 93 GQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSP 140
G F P+ +S +A+ LIR LL + P +R++S L H W + SSP
Sbjct: 222 GTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 273
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Query: 33 LQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISR 92
++ K G P YVSP++L G D WS GV++Y +L G PF+ + LKI
Sbjct: 182 MRTKVGTPYYVSPQVLEG---LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE 238
Query: 93 GQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSP 140
G F P+ +S +A+ LIR LL + P +R++S L H W + SSP
Sbjct: 239 GTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 290
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 66/105 (62%), Gaps = 7/105 (6%)
Query: 32 ELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKIS 91
+++++ G Y++PE+LR +Y + D+WS GVILY +L G PF + ++
Sbjct: 162 KMKERLGTAYYIAPEVLRK--KYDEKC-DVWSCGVILYILLCGYPPFGGQTDQEILKRVE 218
Query: 92 RGQFIT--PD--TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
+G+F PD +S +AK L++ +L +PS+R+S+E+ L+HPW+
Sbjct: 219 KGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 71/125 (56%), Gaps = 10/125 (8%)
Query: 19 LEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
L D +++ + LQ P YV+PE+L +Y ++ DMWSLGVI+Y +L G PF
Sbjct: 172 LTDFGFAKETTQNALQTPCYTPYYVAPEVLGPE-KYD-KSCDMWSLGVIMYILLCGFPPF 229
Query: 79 --NDSEHTSLFLK--ISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
N + S +K I GQ+ P+ +S AK LIR LL+ DP+ERL+ ++HP
Sbjct: 230 YSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289
Query: 131 WLRES 135
W+ +S
Sbjct: 290 WINQS 294
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 71/125 (56%), Gaps = 10/125 (8%)
Query: 19 LEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
L D +++ + LQ P YV+PE+L +Y ++ DMWSLGVI+Y +L G PF
Sbjct: 153 LTDFGFAKETTQNALQTPCYTPYYVAPEVLGPE-KYD-KSCDMWSLGVIMYILLCGFPPF 210
Query: 79 --NDSEHTSLFLK--ISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
N + S +K I GQ+ P+ +S AK LIR LL+ DP+ERL+ ++HP
Sbjct: 211 YSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 270
Query: 131 WLRES 135
W+ +S
Sbjct: 271 WINQS 275
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 66/107 (61%), Gaps = 7/107 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+++++ G Y++PE+LR +Y + D+WS GVILY +L G PF + +
Sbjct: 177 GGKMKERLGTAYYIAPEVLRK--KYDEKC-DVWSCGVILYILLCGYPPFGGQTDQEILKR 233
Query: 90 ISRGQFIT--PD--TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
+ +G+F PD +S +AK L++ +L +PS+R+S+E+ L+HPW+
Sbjct: 234 VEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 32 ELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKIS 91
+++DK G Y++PE+L H Y + D+WS GVILY +L G PFN + + K+
Sbjct: 184 KMKDKIGTAYYIAPEVL--HGTYDEKC-DVWSTGVILYILLSGCPPFNGANEYDILKKVE 240
Query: 92 RGQFITP----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
+G++ +S AK LIR +L PS R+S+ D L H W++
Sbjct: 241 KGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 286
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 32 ELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKIS 91
+++DK G Y++PE+L H Y + D+WS GVILY +L G PFN + + K+
Sbjct: 208 KMKDKIGTAYYIAPEVL--HGTYDEKC-DVWSTGVILYILLSGCPPFNGANEYDILKKVE 264
Query: 92 RGQFITP----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
+G++ +S AK LIR +L PS R+S+ D L H W++
Sbjct: 265 KGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 310
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 32 ELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKIS 91
+++DK G Y++PE+L H Y + D+WS GVILY +L G PFN + + K+
Sbjct: 207 KMKDKIGTAYYIAPEVL--HGTYDEKC-DVWSTGVILYILLSGCPPFNGANEYDILKKVE 263
Query: 92 RGQFITP----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
+G++ +S AK LIR +L PS R+S+ D L H W++
Sbjct: 264 KGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 309
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+E ++ G PA+V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 171 GNEFKNIFGTPAFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 90 ISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
+S + D S+ AK IR LL +DP +R++ +D+L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS---LFLKISRGQFITP 98
+V+PE+L+ G D+WSLG++LYTML G PF + + + +I G+F
Sbjct: 191 FVAPEVLKRQGYDEG--CDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLS 248
Query: 99 ----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQ 143
+T+S AK L+ +L DP +RL+++ L HPW+ + +D P++Q
Sbjct: 249 GGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ-KDKLPQSQ 296
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS-LFLKISRGQ-- 94
G P Y +PEILR A G DMWS+G+I Y +L G PF D +F +I +
Sbjct: 212 GTPGYCAPEILRGCAY--GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYY 269
Query: 95 FITP--DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
FI+P D +S AK L+R L+ DP +RL++ L HPW+
Sbjct: 270 FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV 309
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS---LFLKISRGQFITP 98
+V+PE+L+ G D+WSLG++LYTML G PF + + + +I G+F
Sbjct: 191 FVAPEVLKRQGYDEG--CDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLS 248
Query: 99 ----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQ 143
+T+S AK L+ +L DP +RL+++ L HPW+ + +D P++Q
Sbjct: 249 GGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ-KDKLPQSQ 296
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ D G Y PE +R H RY GR+A +WSLG++LY
Sbjct: 147 RGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH-RYHGRSAAVWSLGILLYD 202
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 203 MVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 256
Query: 131 WLRE 134
W+++
Sbjct: 257 WMQD 260
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 186 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 241
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 242 MVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 295
Query: 131 WLRE 134
W+++
Sbjct: 296 WMQD 299
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 166 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 221
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 222 MVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 275
Query: 131 WLRE 134
W+++
Sbjct: 276 WMQD 279
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ D G Y PE +R H RY GR+A +WSLG++LY
Sbjct: 152 RGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH-RYHGRSAAVWSLGILLYD 207
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 208 MVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 261
Query: 131 WLRE 134
W+++
Sbjct: 262 WMQD 265
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 194 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 249
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 250 MVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 303
Query: 131 WLRE 134
W+++
Sbjct: 304 WMQD 307
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ D G Y PE +R H RY GR+A +WSLG++LY
Sbjct: 151 RGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH-RYHGRSAAVWSLGILLYD 206
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 207 MVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 260
Query: 131 WLRE 134
W+++
Sbjct: 261 WMQD 264
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ D G Y PE +R H RY GR+A +WSLG++LY
Sbjct: 150 RGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH-RYHGRSAAVWSLGILLYD 205
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 206 MVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 259
Query: 131 WLRE 134
W+++
Sbjct: 260 WMQD 263
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 152 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 207
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 208 MVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 261
Query: 131 WLRE 134
W+++
Sbjct: 262 WMQD 265
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ D G Y PE +R H RY GR+A +WSLG++LY
Sbjct: 151 RGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH-RYHGRSAAVWSLGILLYD 206
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 207 MVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 260
Query: 131 WLRE 134
W+++
Sbjct: 261 WMQD 264
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 167 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 222
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 223 MVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 276
Query: 131 WLRE 134
W+++
Sbjct: 277 WMQD 280
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 152 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 207
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 208 MVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 261
Query: 131 WLRE 134
W+++
Sbjct: 262 WMQD 265
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 73.2 bits (178), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 179 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 234
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 235 MVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 288
Query: 131 WLRE 134
W+++
Sbjct: 289 WMQD 292
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ D G Y PE +R H RY GR+A +WSLG++LY
Sbjct: 194 RGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH-RYHGRSAAVWSLGILLYD 249
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 250 MVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 303
Query: 131 WLRE 134
W+++
Sbjct: 304 WMQD 307
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 7/106 (6%)
Query: 32 ELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKIS 91
+++DK G Y++PE+L H Y + D+WS GVILY +L G PFN + + K+
Sbjct: 190 KMKDKIGTAYYIAPEVL--HGTYDEKC-DVWSTGVILYILLSGCPPFNGANEYDILKKVE 246
Query: 92 RGQFITP----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
+G++ +S AK LIR +L PS R+S+ D L H W++
Sbjct: 247 KGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 90 ISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTY 145
+S + D S+ AK IR LL +DP +R++ +D+L HPW++ + +
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAW 288
Query: 146 SPP 148
S P
Sbjct: 289 SHP 291
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 170 GNEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQETLAN 227
Query: 90 ISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTY 145
+S + D S+ AK IR LL +DP +R++ +D+L HPW++ + +
Sbjct: 228 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAW 287
Query: 146 SPP 148
S P
Sbjct: 288 SHP 290
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 90 ISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTY 145
+S + D S+ AK IR LL +DP +R++ +D+L HPW++ + +
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAW 288
Query: 146 SPP 148
S P
Sbjct: 289 SHP 291
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 170 GNEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQETLAN 227
Query: 90 ISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTY 145
+S + D S+ AK IR LL +DP +R++ +D+L HPW++ + +
Sbjct: 228 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAW 287
Query: 146 SPP 148
S P
Sbjct: 288 SHP 290
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 90 ISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTY 145
+S + D S+ AK IR LL +DP +R++ +D+L HPW++ + +
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAW 288
Query: 146 SPP 148
S P
Sbjct: 289 SHP 291
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 90 ISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTY 145
+S + D S+ AK IR LL +DP +R++ +D+L HPW++ + +
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAW 288
Query: 146 SPP 148
S P
Sbjct: 289 SHP 291
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 90 ISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
+S + D S+ AK IR LL +DP +R++ +D+L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Query: 7 VIVIRDSIKLETLEDAVVLED-SDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLG 65
++ ++K+ L A L + +D + +G PA+ PEI +SG D+WS G
Sbjct: 141 LLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAG 200
Query: 66 VILYTMLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSED 125
V LY + G YPF LF I +G + P L++ +L +P++R S
Sbjct: 201 VTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQ 260
Query: 126 TLHHPWLRE 134
H W R+
Sbjct: 261 IRQHSWFRK 269
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 90 ISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
+S + D S+ AK IR LL +DP +R++ +D+L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 90 ISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
+S + D S+ AK IR LL +DP +R++ +D+L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 31 DELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI 90
+E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF +
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
Query: 91 SRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
S + D S+ AK IR LL +DP +R++ +D+L HPW++
Sbjct: 230 SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 90 ISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
+S + D S+ AK IR LL +DP +R++ +D+L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 72.0 bits (175), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 7/110 (6%)
Query: 29 DNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFL 88
+ +++++ G Y++PE+LR +Y + D+WS+GVIL+ +L G PF +
Sbjct: 191 NQKKMKERLGTAYYIAPEVLRK--KYDEKC-DVWSIGVILFILLAGYPPFGGQTDQEILR 247
Query: 89 KISRGQ--FITPD--TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
K+ +G+ F +P+ +S AK LI+ +L+ D R+S++ L HPW++E
Sbjct: 248 KVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKE 297
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 90 ISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
+S + D S+ AK IR LL +DP +R++ +D+L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 194 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 251
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 252 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ D G Y PE +R H RY GR+A +WSLG++LY
Sbjct: 147 RGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH-RYHGRSAAVWSLGILLYD 202
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +S + + LIR L PS+R + E+ +HP
Sbjct: 203 MVCGDIPFEHDE------EIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHP 256
Query: 131 WLRE 134
W+++
Sbjct: 257 WMQD 260
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 185 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 242
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 243 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 174 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 229
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +S + + LIR L PS+R + E+ +HP
Sbjct: 230 MVCGDIPFEHDE------EIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHP 283
Query: 131 WLRE 134
W+++
Sbjct: 284 WMQD 287
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 194 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 251
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 252 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 194 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 249
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +S + + LIR L PS+R + E+ +HP
Sbjct: 250 MVCGDIPFEHDE------EIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHP 303
Query: 131 WLRE 134
W+++
Sbjct: 304 WMQD 307
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 167 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 222
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +S + + LIR L PS+R + E+ +HP
Sbjct: 223 MVCGDIPFEHDE------EIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHP 276
Query: 131 WLRE 134
W+++
Sbjct: 277 WMQD 280
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 90 ISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
+S + D S+ AK IR LL +DP +R++ +D+L HPW++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 166 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 221
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +S + + LIR L PS+R + E+ +HP
Sbjct: 222 MVCGDIPFEHDE------EIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHP 275
Query: 131 WLRE 134
W+++
Sbjct: 276 WMQD 279
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 10/134 (7%)
Query: 8 IVIRDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILR-----SHARYSGRAADMW 62
I++ D++++ + ++L++ G P Y++PEIL+ +H Y G+ D+W
Sbjct: 231 ILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGY-GKEVDLW 289
Query: 63 SLGVILYTMLVGRYPFNDSEHTSLFLKISRG--QFITP--DTLSSKAKCLIRSLLRRDPS 118
+ GVIL+T+L G PF + I G QF +P D SS K LI LL+ DP
Sbjct: 290 ACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPE 349
Query: 119 ERLSSEDTLHHPWL 132
RL++E L HP+
Sbjct: 350 ARLTAEQALQHPFF 363
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 12/106 (11%)
Query: 38 GCPAYVSPEILRS--HARYSGRAADMWSLGVILYTMLVGRYPFNDSEH---TSLFLKISR 92
G P Y++PE+L S A Y+ RA D WSLGVIL+ L G PF SEH SL +I+
Sbjct: 178 GTPTYLAPEVLVSVGTAGYN-RAVDCWSLGVILFICLSGYPPF--SEHRTQVSLKDQITS 234
Query: 93 GQF-ITPDT---LSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
G++ P+ +S KA L++ LL DP R ++E+ L HPWL++
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 199 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 254
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +S + + LIR L PS+R + E+ +HP
Sbjct: 255 MVCGDIPFEHDE------EIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHP 308
Query: 131 WLRE 134
W+++
Sbjct: 309 WMQD 312
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 70/118 (59%), Gaps = 10/118 (8%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E + ++ L + P YV+PE+L +Y ++ DMWSLGVI+Y +L G PF + +
Sbjct: 167 ETTSHNSLTEPCYTPYYVAPEVL-GPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 224
Query: 86 ----LFLKISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
+ +I GQ+ P+ +S + K LIR+LL+ +P++R++ + ++HPW+ +S
Sbjct: 225 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 173 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 231 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 12/106 (11%)
Query: 38 GCPAYVSPEILRS--HARYSGRAADMWSLGVILYTMLVGRYPFNDSEH---TSLFLKISR 92
G P Y++PE+L S A Y+ RA D WSLGVIL+ L G PF SEH SL +I+
Sbjct: 177 GTPTYLAPEVLVSVGTAGYN-RAVDCWSLGVILFICLSGYPPF--SEHRTQVSLKDQITS 233
Query: 93 GQF-ITPDT---LSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
G++ P+ +S KA L++ LL DP R ++E+ L HPWL++
Sbjct: 234 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 12/106 (11%)
Query: 38 GCPAYVSPEILRS--HARYSGRAADMWSLGVILYTMLVGRYPFNDSEH---TSLFLKISR 92
G P Y++PE+L S A Y+ RA D WSLGVIL+ L G PF SEH SL +I+
Sbjct: 178 GTPTYLAPEVLVSVGTAGYN-RAVDCWSLGVILFICLSGYPPF--SEHRTQVSLKDQITS 234
Query: 93 GQF-ITPDT---LSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
G++ P+ +S KA L++ LL DP R ++E+ L HPWL++
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 12/106 (11%)
Query: 38 GCPAYVSPEILRS--HARYSGRAADMWSLGVILYTMLVGRYPFNDSEH---TSLFLKISR 92
G P Y++PE+L S A Y+ RA D WSLGVIL+ L G PF SEH SL +I+
Sbjct: 178 GTPTYLAPEVLVSVGTAGYN-RAVDCWSLGVILFICLSGYPPF--SEHRTQVSLKDQITS 234
Query: 93 GQF-ITPDT---LSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
G++ P+ +S KA L++ LL DP R ++E+ L HPWL++
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 168 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 168 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 168 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 173 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 231 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 173 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 231 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 169 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 226
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 227 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 171 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 229 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 169 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 226
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 227 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 12/106 (11%)
Query: 38 GCPAYVSPEILRS--HARYSGRAADMWSLGVILYTMLVGRYPFNDSEH---TSLFLKISR 92
G P Y++PE+L S A Y+ RA D WSLGVIL+ L G PF SEH SL +I+
Sbjct: 184 GTPTYLAPEVLVSVGTAGYN-RAVDCWSLGVILFICLSGYPPF--SEHRTQVSLKDQITS 240
Query: 93 GQF-ITPDT---LSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
G++ P+ +S KA L++ LL DP R ++E+ L HPWL++
Sbjct: 241 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 170 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 227
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 228 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 171 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 229 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 168 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 169 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 226
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQT 144
PD ++ A+ LI LL+ +PS+R + L HPW+ + +Q
Sbjct: 227 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNSQN 273
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 171 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 229 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 171 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 229 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 173 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 231 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 170 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 227
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 228 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 167 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 224
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 225 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 168 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 171 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 229 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
N +++D+ G Y++PE+LR Y + D+WS GVILY +L G PF + +
Sbjct: 177 NTKMKDRIGTAYYIAPEVLR--GTYDEKC-DVWSAGVILYILLSGTPPFYGKNEYDILKR 233
Query: 90 ISRGQ--FITPD--TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSP 140
+ G+ F P T+S AK LIR +L PS R+++ L HPW+++ +P
Sbjct: 234 VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETP 288
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 168 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 168 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 165 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 222
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 223 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 257
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 172 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 229
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 230 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 264
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 171 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 229 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 12/106 (11%)
Query: 38 GCPAYVSPEILRS--HARYSGRAADMWSLGVILYTMLVGRYPFNDSEH---TSLFLKISR 92
G P Y++PE+L S A Y+ RA D WSLGVIL+ L G PF SEH SL +I+
Sbjct: 303 GTPTYLAPEVLVSVGTAGYN-RAVDCWSLGVILFICLSGYPPF--SEHRTQVSLKDQITS 359
Query: 93 GQF-ITPDT---LSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
G++ P+ +S KA L++ LL DP R ++E+ L HPWL++
Sbjct: 360 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 12/106 (11%)
Query: 38 GCPAYVSPEILRS--HARYSGRAADMWSLGVILYTMLVGRYPFNDSEH---TSLFLKISR 92
G P Y++PE+L S A Y+ RA D WSLGVIL+ L G PF SEH SL +I+
Sbjct: 317 GTPTYLAPEVLVSVGTAGYN-RAVDCWSLGVILFICLSGYPPF--SEHRTQVSLKDQITS 373
Query: 93 GQF-ITPDT---LSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
G++ P+ +S KA L++ LL DP R ++E+ L HPWL++
Sbjct: 374 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-------NDSEHTS--LFL 88
G P Y++PEILR G + D W+LGV+++ M+ GR PF N ++T LF
Sbjct: 168 GTPNYIAPEILRGEDY--GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 225
Query: 89 KISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSE------DTLHHPWLRESRDSSPET 142
I Q P +LS KA +++S L +DP ERL D HP+ R E
Sbjct: 226 VILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQ 285
Query: 143 QTYSPP 148
+ PP
Sbjct: 286 KQVVPP 291
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ D G Y PE +R H RY GR+A +WSLG++LY
Sbjct: 147 RGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEWIRYH-RYHGRSAAVWSLGILLYD 202
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I GQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 203 MVCGDIPFEHDE------EIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 256
Query: 131 WLRE 134
W+++
Sbjct: 257 WMQD 260
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-------NDSEHTS--LFL 88
G P Y++PEILR G + D W+LGV+++ M+ GR PF N ++T LF
Sbjct: 172 GTPNYIAPEILRGED--YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 229
Query: 89 KISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSE------DTLHHPWLRESRDSSPET 142
I Q P +LS KA +++S L +DP ERL D HP+ R E
Sbjct: 230 VILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQ 289
Query: 143 QTYSPP 148
+ PP
Sbjct: 290 KQVVPP 295
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 10/118 (8%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E + ++ L P YV+PE+L +Y ++ DMWSLGVI+Y +L G PF + +
Sbjct: 174 ETTSHNSLTTPCYTPYYVAPEVL-GPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 231
Query: 86 ----LFLKISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
+ +I GQ+ P+ +S + K LIR+LL+ +P++R++ + ++HPW+ +S
Sbjct: 232 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 289
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG PF + + +ISR +F
Sbjct: 172 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF 229
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
PD ++ A+ LI LL+ + S+RL+ + L HPW++ +
Sbjct: 230 PDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKAN 267
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE + R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 173 GTLDYLPPEXIE--GRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 231 PDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG+ PF + + + +ISR +F
Sbjct: 168 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTF 225
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ A+ LI LL+ +PS+R + L HPW+
Sbjct: 226 PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSE----HTSLFLKISRG 93
G PAY++PE+L Y G+ AD+WS GV LY MLVG YPF D E + +I
Sbjct: 179 GTPAYIAPEVLLRQ-EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSV 237
Query: 94 QFITPDTLSSKAKC--LIRSLLRRDPSERLSSEDTLHHPWL 132
++ PD + +C LI + DP+ R+S + H W
Sbjct: 238 KYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 180 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 235
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I GQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 236 MVCGDIPFEHDE------EIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 289
Query: 131 WLRE 134
W+++
Sbjct: 290 WMQD 293
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 180 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 235
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I GQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 236 MVCGDIPFEHDE------EIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 289
Query: 131 WLRE 134
W+++
Sbjct: 290 WMQD 293
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 10/118 (8%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E + ++ L P YV+PE+L +Y ++ DMWSLGVI+Y +L G PF + +
Sbjct: 183 ETTSHNSLTTPCYTPYYVAPEVL-GPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 240
Query: 86 ----LFLKISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
+ +I GQ+ P+ +S + K LIR+LL+ +P++R++ + ++HPW+ +S
Sbjct: 241 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 298
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 10/118 (8%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E + ++ L P YV+PE+L +Y ++ DMWSLGVI+Y +L G PF + +
Sbjct: 169 ETTSHNSLTTPCYTPYYVAPEVL-GPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 226
Query: 86 ----LFLKISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
+ +I GQ+ P+ +S + K LIR+LL+ +P++R++ + ++HPW+ +S
Sbjct: 227 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 179 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 234
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I GQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 235 MVCGDIPFEHDE------EIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 288
Query: 131 WLRE 134
W+++
Sbjct: 289 WMQD 292
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ R D+WSLGV+ Y LVG PF + + +ISR +F
Sbjct: 172 GTLDYLPPEMIE--GRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF 229
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
PD ++ A+ LI LL+ + S+RL+ + L HPW++ +
Sbjct: 230 PDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKAN 267
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 10/118 (8%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E + ++ L P YV+PE+L +Y ++ DMWSLGVI+Y +L G PF + +
Sbjct: 173 ETTSHNSLTTPCYTPYYVAPEVL-GPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 230
Query: 86 ----LFLKISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
+ +I GQ+ P+ +S + K LIR+LL+ +P++R++ + ++HPW+ +S
Sbjct: 231 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 288
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-------NDSEHTS--LFL 88
G P Y++PEILR G + D W+LGV+++ M+ GR PF N ++T LF
Sbjct: 215 GTPNYIAPEILRGEDY--GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 272
Query: 89 KISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSE------DTLHHPWLRESRDSSPET 142
I Q P +LS KA +++S L +DP ERL D HP+ R E
Sbjct: 273 VILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQ 332
Query: 143 QTYSPP 148
+ PP
Sbjct: 333 KQVVPP 338
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 10/118 (8%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E + ++ L P YV+PE+L +Y ++ DMWSLGVI+Y +L G PF + +
Sbjct: 168 ETTSHNSLTTPCYTPYYVAPEVL-GPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 225
Query: 86 ----LFLKISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
+ +I GQ+ P+ +S + K LIR+LL+ +P++R++ + ++HPW+ +S
Sbjct: 226 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 283
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 70.5 bits (171), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 179 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 234
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I GQ +SS+ + LIR L PS+R + E+ +HP
Sbjct: 235 MVCGDIPFEHDE------EIIGGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 288
Query: 131 WLRE 134
W+++
Sbjct: 289 WMQD 292
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 10/118 (8%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E + ++ L P YV+PE+L +Y ++ DMWSLGVI+Y +L G PF + +
Sbjct: 175 ETTSHNSLTTPCYTPYYVAPEVL-GPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 232
Query: 86 ----LFLKISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
+ +I GQ+ P+ +S + K LIR+LL+ +P++R++ + ++HPW+ +S
Sbjct: 233 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 290
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 10/118 (8%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E + ++ L P YV+PE+L +Y ++ DMWSLGVI+Y +L G PF + +
Sbjct: 167 ETTSHNSLTTPCYTPYYVAPEVL-GPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 224
Query: 86 ----LFLKISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
+ +I GQ+ P+ +S + K LIR+LL+ +P++R++ + ++HPW+ +S
Sbjct: 225 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 10/118 (8%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E + ++ L P YV+PE+L +Y ++ DMWSLGVI+Y +L G PF + +
Sbjct: 219 ETTSHNSLTTPCYTPYYVAPEVL-GPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 276
Query: 86 ----LFLKISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
+ +I GQ+ P+ +S + K LIR+LL+ +P++R++ + ++HPW+ +S
Sbjct: 277 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 334
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 10/118 (8%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E + ++ L P YV+PE+L +Y ++ DMWSLGVI+Y +L G PF + +
Sbjct: 213 ETTSHNSLTTPCYTPYYVAPEVL-GPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 270
Query: 86 ----LFLKISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
+ +I GQ+ P+ +S + K LIR+LL+ +P++R++ + ++HPW+ +S
Sbjct: 271 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 10/118 (8%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E + ++ L P YV+PE+L +Y ++ DMWSLGVI+Y +L G PF + +
Sbjct: 169 ETTSHNSLTTPCYTPYYVAPEVL-GPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLA 226
Query: 86 ----LFLKISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
+ +I GQ+ P+ +S + K LIR+LL+ +P++R++ + ++HPW+ +S
Sbjct: 227 ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 167 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 222
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I RGQ +S + + LIR L P +R + E+ +HP
Sbjct: 223 MVCGDIPFEHDE------EIIRGQVFFRQRVSXECQHLIRWCLALRPXDRPTFEEIQNHP 276
Query: 131 WLRE 134
W+++
Sbjct: 277 WMQD 280
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEIL +Y+ + D WS GV+LY ML+G+ PF+ + LF I
Sbjct: 181 GTPDYIAPEILLGQ-KYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY 238
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSE-DTLHHPWLRESRDSSPETQTYSPP 148
P L +AK L+ L R+P +RL D HP RE E + PP
Sbjct: 239 PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPP 290
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEIL +Y+ + D WS GV+LY ML+G+ PF+ + LF I
Sbjct: 180 GTPDYIAPEILLGQ-KYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY 237
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSE-DTLHHPWLRESRDSSPETQTYSPP 148
P L +AK L+ L R+P +RL D HP RE E + PP
Sbjct: 238 PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPP 289
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-------NDSEHTS--LFL 88
G P Y++PEILR G + D W+LGV+++ M+ GR PF N ++T LF
Sbjct: 183 GTPNYIAPEILRGED--YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 240
Query: 89 KISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSS------EDTLHHPWLRESRDSSPET 142
I Q P ++S KA +++S L +DP ERL D HP+ R E
Sbjct: 241 VILEKQIRIPRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQ 300
Query: 143 QTYSPP 148
+ PP
Sbjct: 301 KQVVPP 306
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 22/126 (17%)
Query: 32 ELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYP----------FNDS 81
+++ RG ++ PE + + Y+G D+WSLG+ LY M P FN+
Sbjct: 206 KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI 265
Query: 82 EHTSLFLKISRGQFITPDTLSSKAKC-----------LIRSLLRRDPSERLSSEDTLHHP 130
++ + R F+ P T + K+ C ++ LR++P+ER++SED L H
Sbjct: 266 RTKNIEYPLDRNHFLYPLT-NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE 324
Query: 131 WLRESR 136
WL ++
Sbjct: 325 WLADTN 330
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 180 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 235
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I GQ +S + + LIR L PS+R + E+ +HP
Sbjct: 236 MVCGDIPFEHDE------EIIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHP 289
Query: 131 WLRE 134
W+++
Sbjct: 290 WMQD 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 179 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 234
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I GQ +S + + LIR L PS+R + E+ +HP
Sbjct: 235 MVCGDIPFEHDE------EIIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHP 288
Query: 131 WLRE 134
W+++
Sbjct: 289 WMQD 292
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 61/101 (60%), Gaps = 7/101 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQF-I 96
G P +++PE+++ G+ D+W GVIL+ +L G PF ++ LF I +G++ +
Sbjct: 195 GTPHFMAPEVVKREP--YGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKM 251
Query: 97 TP---DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
P +S AK L+R +L DP+ER++ + L+HPWL+E
Sbjct: 252 NPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R +KL +L+D+ + R Y PE +R H RY GR+A +WSLG++LY
Sbjct: 180 RGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH-RYHGRSAAVWSLGILLYD 235
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF E +I GQ +S + + LIR L PS+R + E+ +HP
Sbjct: 236 MVCGDIPFEHDE------EIIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHP 289
Query: 131 WLRE 134
W+++
Sbjct: 290 WMQD 293
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 68.9 bits (167), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 34 QDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRG 93
+DK G Y++PE+L H Y + D+WS GVILY +L G PFN + + K+ +G
Sbjct: 186 KDKIGTAYYIAPEVL--HGTYDEKC-DVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 242
Query: 94 QFITP----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
++ +S AK LIR L PS R+S+ D L H W++
Sbjct: 243 KYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQ 286
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
N +++D+ G Y++PE+LR Y + D+WS GVILY +L G PF + +
Sbjct: 177 NTKMKDRIGTAYYIAPEVLR--GTYDEKC-DVWSAGVILYILLSGTPPFYGKNEYDILKR 233
Query: 90 ISRGQ--FITPD--TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
+ G+ F P T+S AK LIR +L PS R+++ L HPW+++
Sbjct: 234 VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
N +++D+ G Y++PE+LR Y + D+WS GVILY +L G PF + +
Sbjct: 177 NTKMKDRIGTAYYIAPEVLR--GTYDEKC-DVWSAGVILYILLSGTPPFYGKNEYDILKR 233
Query: 90 ISRGQ--FITPD--TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
+ G+ F P T+S AK LIR +L PS R+++ L HPW+++
Sbjct: 234 VETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 61/101 (60%), Gaps = 7/101 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQF-I 96
G P +++PE+++ G+ D+W GVIL+ +L G PF ++ LF I +G++ +
Sbjct: 195 GTPHFMAPEVVKREP--YGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKM 251
Query: 97 TP---DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
P +S AK L+R +L DP+ER++ + L+HPWL+E
Sbjct: 252 NPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 61/101 (60%), Gaps = 7/101 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQF-I 96
G P +++PE+++ G+ D+W GVIL+ +L G PF ++ LF I +G++ +
Sbjct: 197 GTPHFMAPEVVKREPY--GKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKM 253
Query: 97 TP---DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
P +S AK L+R +L DP+ER++ + L+HPWL+E
Sbjct: 254 NPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE 294
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E + ++L + G P Y +PE+ + +Y G D+WSLGVILYT++ G PF+
Sbjct: 162 EFTFGNKLDEFCGSPPYAAPELFQG-KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 220
Query: 86 LFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTY 145
L ++ RG++ P +S+ + L++ L +PS+R + E + W+ + E + Y
Sbjct: 221 LRERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDD-ELKPY 279
Query: 146 SPP 148
P
Sbjct: 280 VEP 282
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y +PE+ + +Y G D+WSLGVILYT++ G PF+ L ++ RG++
Sbjct: 174 GAPPYAAPELFQG-KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 232
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPP 148
P +S+ + L++ L +PS+R + E + W+ + E + Y P
Sbjct: 233 PFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDD-ELKPYVEP 282
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PE++ + ++ D WS G+++Y ML G PF DS + KI +
Sbjct: 165 GTPDYIAPEVVSTKP--YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF 222
Query: 98 PDTLSSKAKCLIRSLLRRDPSERL-----SSEDTLHHPWLRE 134
P + K L+ L+ RD S+RL +ED +HPW +E
Sbjct: 223 PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y +PE+ + +Y G D+WSLGVILYT++ G PF+ L ++ RG++
Sbjct: 174 GSPPYAAPELFQG-KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 232
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPP 148
P +S+ + L++ L +PS+R + E + W+ + E + Y P
Sbjct: 233 PFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDD-ELKPYVAP 282
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y +PE+ + +Y G D+WSLGVILYT++ G PF+ L ++ RG++
Sbjct: 167 GSPPYAAPELFQG-KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 225
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPP 148
P +S+ + L++ L +PS+R + E + W+ + E + Y P
Sbjct: 226 PFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDD-ELKPYVEP 275
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y +PE+ + +Y G D+WSLGVILYT++ G PF+ L ++ RG++
Sbjct: 174 GSPPYAAPELFQG-KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 232
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPP 148
P +S+ + L++ L +PS+R + E + W+ + E + Y P
Sbjct: 233 PFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDD-ELKPYVEP 282
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y +PE+ + +Y G D+WSLGVILYT++ G PF+ L ++ RG++
Sbjct: 174 GSPPYAAPELFQG-KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 232
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPP 148
P +S+ + L++ L +PS+R + E + W+ + E + Y P
Sbjct: 233 PFYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDD-ELKPYVEP 282
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 61/124 (49%), Gaps = 22/124 (17%)
Query: 32 ELQDKRGCPAYVSPEILR---SHARYSGRAADMWSLGVILYTMLVGRYPF---------- 78
EL G Y++PE++ A + + D+WSLGV+LY ML G PF
Sbjct: 177 ELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGW 236
Query: 79 NDSE-----HTSLFLKISRGQFITPDT----LSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
+ E LF I G++ PD +SS+AK LI LL RD +RLS+ L H
Sbjct: 237 DRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQH 296
Query: 130 PWLR 133
PW++
Sbjct: 297 PWVQ 300
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 29 DNDELQDKRGCPAYVSPEIL--RSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSL 86
D + +D G P Y++PE+L + H+ D+WSLG ILYT+LVG+ PF S
Sbjct: 195 DGERKKDLCGTPNYIAPEVLCKKGHSF----EVDIWSLGCILYTLLVGKPPFETSCLKET 250
Query: 87 FLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTL 127
+++I + ++ P ++ A LIR +L DP+ R S + L
Sbjct: 251 YIRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEIL+ G A D W++GV+LY ML G PF LF I + +
Sbjct: 186 GTPDYIAPEILQE--MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY 243
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS------EDTLHHPWLRESRDSSPETQTYSPP 148
P L A +++S + ++P+ RL S L HP+ +E + + PP
Sbjct: 244 PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPP 300
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 29 DNDELQDKRGCPAYVSPEIL--RSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSL 86
D + +D G P Y++PE+L + H+ D+WSLG ILYT+LVG+ PF S
Sbjct: 179 DGERKKDLCGTPNYIAPEVLCKKGHSF----EVDIWSLGCILYTLLVGKPPFETSCLKET 234
Query: 87 FLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTL 127
+++I + ++ P ++ A LIR +L DP+ R S + L
Sbjct: 235 YIRIKKNEYSVPRHINPVASALIRRMLHADPTLRPSVAELL 275
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPDTL 101
Y+ PE++ R D+W +GV+ Y +LVG PF + H + +I + P ++
Sbjct: 187 YLPPEMIE--GRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASV 244
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
+ A+ LI LLR +PSERL HPW+R +
Sbjct: 245 PTGAQDLISKLLRHNPSERLPLAQVSAHPWVRAN 278
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 10/136 (7%)
Query: 8 IVIRDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILR-----SHARYSGRAADMW 62
I++ D + ++ + + ++L++ G P+Y++PEI+ +H Y G+ DMW
Sbjct: 142 ILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGY-GKEVDMW 200
Query: 63 SLGVILYTMLVGRYPFNDSEHTSLFLKISRG--QFITP--DTLSSKAKCLIRSLLRRDPS 118
S GVI+YT+L G PF + + I G QF +P D S K L+ L P
Sbjct: 201 STGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQ 260
Query: 119 ERLSSEDTLHHPWLRE 134
+R ++E+ L HP+ ++
Sbjct: 261 KRYTAEEALAHPFFQQ 276
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 10/136 (7%)
Query: 8 IVIRDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILR-----SHARYSGRAADMW 62
I++ D + ++ + + ++L++ G P+Y++PEI+ +H Y G+ DMW
Sbjct: 155 ILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGY-GKEVDMW 213
Query: 63 SLGVILYTMLVGRYPFNDSEHTSLFLKISRG--QFITP--DTLSSKAKCLIRSLLRRDPS 118
S GVI+YT+L G PF + + I G QF +P D S K L+ L P
Sbjct: 214 STGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQ 273
Query: 119 ERLSSEDTLHHPWLRE 134
+R ++E+ L HP+ ++
Sbjct: 274 KRYTAEEALAHPFFQQ 289
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y +PE+ + +Y G D+WSLGVILYT++ G PF+ L ++ RG++
Sbjct: 175 GAPPYAAPELFQG-KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 233
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPD 154
P +S+ + L++ L +P +R + E + W+ + E + + P+ + D
Sbjct: 234 PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEED-ELKPFVEPELDISD 289
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.9 bits (159), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y +PE+ + +Y G D+WSLGVILYT++ G PF+ L ++ RG++
Sbjct: 172 GSPPYAAPELFQG-KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 230
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPD 154
P +S+ + L++ L +P +R + E + W+ + E + + P+ + D
Sbjct: 231 PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEED-ELKPFVEPELDISD 286
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 10/136 (7%)
Query: 8 IVIRDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILR-----SHARYSGRAADMW 62
I++ D + ++ + + ++L+ G P+Y++PEI+ +H Y G+ DMW
Sbjct: 155 ILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGY-GKEVDMW 213
Query: 63 SLGVILYTMLVGRYPFNDSEHTSLFLKISRG--QFITP--DTLSSKAKCLIRSLLRRDPS 118
S GVI+YT+L G PF + + I G QF +P D S K L+ L P
Sbjct: 214 STGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQ 273
Query: 119 ERLSSEDTLHHPWLRE 134
+R ++E+ L HP+ ++
Sbjct: 274 KRYTAEEALAHPFFQQ 289
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 38 GCPAYVSPEIL--RSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQF 95
G P Y++PE+L + H+ D+WSLG ILYT+LVG+ PF S +++I + ++
Sbjct: 204 GTPNYIAPEVLCKKGHSF----EVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY 259
Query: 96 ITPDTLSSKAKCLIRSLLRRDPSERLSSEDTL 127
P ++ A LIR +L DP+ R S + L
Sbjct: 260 SVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 38 GCPAYVSPEIL--RSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQF 95
G P Y++PE+L + H+ D+WSLG ILYT+LVG+ PF S +++I + ++
Sbjct: 204 GTPNYIAPEVLCKKGHSF----EVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY 259
Query: 96 ITPDTLSSKAKCLIRSLLRRDPSERLSSEDTL 127
P ++ A LIR +L DP+ R S + L
Sbjct: 260 SVPRHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y +PE+ + +Y G D+WSLGVILYT++ G PF+ L ++ RG++
Sbjct: 174 GAPPYAAPELFQG-KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 232
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPW 131
P S+ + L++ L +PS+R + E W
Sbjct: 233 PFYXSTDCENLLKKFLILNPSKRGTLEQIXKDRW 266
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ ++ Y G++ D W+ GV+LY ML G+ PF+ + LF I
Sbjct: 182 GTPDYIAPEII-AYQPY-GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY 239
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWLRESRDSSPETQTYSPP 148
P +LS +A + + L+ + P++RL D H + R E + PP
Sbjct: 240 PKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPP 295
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ ++ Y G++ D W+ GV+LY ML G+ PF + LF I
Sbjct: 183 GTPDYIAPEII-AYQPY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 240
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWLRESRDSSPETQTYSPP 148
P ++S +A + + L+ + P +RL D H + R E + PP
Sbjct: 241 PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPP 296
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 25 LEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF---NDS 81
L + + + K G P +V+PE+L + G D WS GV+L+ +L+G PF ND+
Sbjct: 223 LNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA 282
Query: 82 EHTSLFLKISRGQFITP--DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRD 137
+ S L + F P + LS A+ L+ +LL R+ ER + L HPW+ + D
Sbjct: 283 DTISQVLN-KKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFN---DSEHTSLFLKISRGQFITP 98
+V+PE+L + A D+WSLGV+LYTML G PF D + +I G+F
Sbjct: 186 FVAPEVLERQGYDA--ACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLS 243
Query: 99 ----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
+++S AK L+ +L DP +RL++ L HPW+
Sbjct: 244 GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 27 DSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSL 86
+ D + + G P Y++PE+L D+WS+G I+YT+LVG+ PF S
Sbjct: 168 EYDGERKKTLCGTPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKET 225
Query: 87 FLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLH 128
+L+I + ++ P ++ A LI+ +L+ DP+ R + + L+
Sbjct: 226 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLN 267
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PE+L D+WS+G I+YT+LVG+ PF S +L+I + ++
Sbjct: 201 GTPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 258
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLH 128
P ++ A LI+ +L+ DP+ R + + L+
Sbjct: 259 PKHINPVAASLIQKMLQTDPTARPTINELLN 289
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PE+L D+WS+G I+YT+LVG+ PF S +L+I + ++
Sbjct: 203 GTPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 260
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLH 128
P ++ A LI+ +L+ DP+ R + + L+
Sbjct: 261 PKHINPVAASLIQKMLQTDPTARPTINELLN 291
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 27 DSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSL 86
+ D + + G P Y++PE+L D+WS+G I+YT+LVG+ PF S
Sbjct: 168 EYDGERKKTLCGTPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKET 225
Query: 87 FLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLH 128
+L+I + ++ P ++ A LI+ +L+ DP+ R + + L+
Sbjct: 226 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLN 267
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 27 DSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSL 86
+ D + + G P Y++PE+L D+WS+G I+YT+LVG+ PF S
Sbjct: 172 EYDGERKKTLCGTPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKET 229
Query: 87 FLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLH 128
+L+I + ++ P ++ A LI+ +L+ DP+ R + + L+
Sbjct: 230 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLN 271
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y +PE+ + +Y G D+WSLGVILYT++ G PF+ L ++ RG++
Sbjct: 175 GSPPYAAPELFQG-KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 233
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPDID 156
P +S+ + L++ LL +P +R S E + W+ + E + Y+ PD PD +
Sbjct: 234 PFYMSTDCENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEE-ELKPYTEPD---PDFN 288
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 25/138 (18%)
Query: 32 ELQDKRGCPAYVSPEILRSHARYSG---RAADMWSLGVILYTMLVGRYPFND-------- 80
EL G Y++PE++ + + + + D+WSLGVILY +L G PF
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGW 236
Query: 81 -------SEHTSLFLKISRGQFITPDT----LSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
+ LF I G++ PD +S AK LI LL RD +RLS+ L H
Sbjct: 237 DRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296
Query: 130 PWLRESRDSSPETQTYSP 147
PW+ + +PE +P
Sbjct: 297 PWV---QGCAPENTLPTP 311
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 25/138 (18%)
Query: 32 ELQDKRGCPAYVSPEILRSHARYSG---RAADMWSLGVILYTMLVGRYPFND-------- 80
EL G Y++PE++ + + + + D+WSLGVILY +L G PF
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGW 236
Query: 81 -------SEHTSLFLKISRGQFITPDT----LSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
+ LF I G++ PD +S AK LI LL RD +RLS+ L H
Sbjct: 237 DRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296
Query: 130 PWLRESRDSSPETQTYSP 147
PW+ + +PE +P
Sbjct: 297 PWV---QGCAPENTLPTP 311
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 10/104 (9%)
Query: 40 PAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLF----LKISRGQF 95
P YV+PE+L +Y ++ D WSLGVI Y +L G PF + ++ +I GQ+
Sbjct: 227 PYYVAPEVL-GPEKYD-KSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQY 284
Query: 96 ITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
P+ +S + K LIR+LL+ +P++R + + +HPW+ +S
Sbjct: 285 EFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQS 328
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PE+L D+WS+G I+YT+LVG+ PF S +L+I + ++
Sbjct: 177 GTPNYIAPEVLSKKGH--SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 234
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLH 128
P ++ A LI+ +L+ DP+ R + + L+
Sbjct: 235 PKHINPVAASLIQKMLQTDPTARPTINELLN 265
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF E ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.9 bits (154), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLF 87
S + +L+D+ G Y++PE+L+ +Y+ + D+WS GVI+Y +L G PF +
Sbjct: 200 SKDYKLRDRLGTAYYIAPEVLKK--KYNEKC-DVWSCGVIMYILLCGYPPFGGQNDQDII 256
Query: 88 LKISRGQ----FITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
K+ +G+ F +S +AK LI+ +L D ++R ++E+ L+ W+++
Sbjct: 257 KKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKK 307
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 33 LQDKRGCPAYVSPEILRSHAR-YSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKIS 91
L + G PA+++PE L + +SG+A D+W++GV LY + G+ PF D L KI
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIK 253
Query: 92 RGQFITPDT--LSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
PD ++ K LI +L ++P R+ + HPW+
Sbjct: 254 SQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E D E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 86 LFLKISRGQFITPDTLSSK----AKCLIRSLLRRDPSERLSSEDTLHHPWL 132
I+ + + S+ AK IR LL ++ +RL+ ++ L HPW+
Sbjct: 226 TLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E D E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 86 LFLKISRGQFITPDTLSSK----AKCLIRSLLRRDPSERLSSEDTLHHPWL 132
I+ + + S+ AK IR LL ++ +RL+ ++ L HPW+
Sbjct: 226 TLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.2 bits (152), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ ++ Y G++ D W+ GV+LY ML G+ PF + LF I
Sbjct: 504 GTPDYIAPEII-AYQPY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY 561
Query: 98 PDTLSSKAKCLIRSLLRRDPSERL-----SSEDTLHHPWLRESRDSSPETQTYSPP 148
P ++S +A + + L+ + P +RL D H + R E + PP
Sbjct: 562 PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPP 617
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 57 RAADMWSLGVILYTMLVGRYPFNDSEHTS----LFLKISRGQFITPD----TLSSKAKCL 108
++ DMWSLGVI+Y +L G PF + + + +I GQ+ P+ +S + K L
Sbjct: 177 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 236
Query: 109 IRSLLRRDPSERLSSEDTLHHPWLRES 135
IR+LL+ +P++R++ + ++HPW+ +S
Sbjct: 237 IRNLLKTEPTQRMTITEFMNHPWIMQS 263
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 201 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWF 298
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 16/129 (12%)
Query: 32 ELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKIS 91
EL++ G P Y++PEIL + A DMW++G+I Y +L PF ++ +L IS
Sbjct: 189 ELREIMGTPEYLAPEILNYDPITT--ATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNIS 246
Query: 92 RGQF-ITPDTLSSKAKC---LIRSLLRRDPSERLSSEDTLHHPWLR----------ESRD 137
+ + +T SS ++ I+SLL ++P +R ++E L H WL+ E
Sbjct: 247 QVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETS 306
Query: 138 SSPETQTYS 146
SS +TQ +S
Sbjct: 307 SSSQTQDHS 315
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 165 GNEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGETKQETLTN 222
Query: 90 ISRGQFITPDTLSSK----AKCLIRSLLRRDPSERLSSEDTLHHPWLRESR 136
IS + + S AK IR LL +DP R++ +L H W++ R
Sbjct: 223 ISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 195 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 252
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 253 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 292
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E D E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 86 LFLKISRGQFITPDTLSSK----AKCLIRSLLRRDPSERLSSEDTLHHPWL 132
I+ + + S AK IR LL ++ +RL+ ++ L HPW+
Sbjct: 226 TLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 187 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 244
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 245 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 284
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 201 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 201 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 193 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 250
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 251 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 290
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 186 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 243
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 244 PSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWF 283
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 193 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 250
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 251 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 290
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E D E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEP--LGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 86 LFLKISRGQFITPDTLSSK----AKCLIRSLLRRDPSERLSSEDTLHHPWL 132
I+ + + S+ AK IR LL ++ +RL+ ++ L HPW+
Sbjct: 226 TLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 201 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWF 297
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 201 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 201 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 201 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 201 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 201 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 201 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 201 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIIISKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 221 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 278
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 279 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 201 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 258
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 259 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 221 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 278
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 279 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 221 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 278
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 279 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E D E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 86 LFLKISRGQFITPDTLSSK----AKCLIRSLLRRDPSERLSSEDTLHHPWL 132
I+ + + S AK IR LL ++ +RL+ ++ L HPW+
Sbjct: 226 TLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 26 EDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
E D E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 168 EIEDGVEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 86 LFLKISRGQFITPDTLSSK----AKCLIRSLLRRDPSERLSSEDTLHHPWL 132
I+ + + S AK IR LL ++ +RL+ ++ L HPW+
Sbjct: 226 TLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 20/142 (14%)
Query: 25 LEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHT 84
L+ DN L+ Y +PE+L + + D+WSLGVILYTML G+ PF + +
Sbjct: 158 LKPPDNQPLKTPCFTLHYAAPELLNQNGY--DESCDLWSLGVILYTMLSGQVPFQSHDRS 215
Query: 85 -------SLFLKISRGQFITP----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
+ KI +G F +S +AK LI+ LL DP++RL ++ WL+
Sbjct: 216 LTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQ 275
Query: 134 ESRDSSPETQTYSPPDQMVPDI 155
+ +Q S P M PDI
Sbjct: 276 DG------SQLSSNP-LMTPDI 290
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 186 GNEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGETKQETLTN 243
Query: 90 ISRGQFITPDTLSSK----AKCLIRSLLRRDPSERLSSEDTLHHPWLRESR 136
IS + + S AK IR LL +DP R+ +L H W++ R
Sbjct: 244 ISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAIR 294
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y++PE++ +AD WS GV+++ ML G PF + I + +
Sbjct: 192 GTVEYMAPEVVNRQGH--SHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGM 249
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS 123
P LS++A+ L+R+L +R+P+ RL S
Sbjct: 250 PQFLSTEAQSLLRALFKRNPANRLGS 275
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+E ++ G P +V+PEI+ G ADMWS+GVI Y +L G PF
Sbjct: 172 GNEFKNIFGTPEFVAPEIVNYEPL--GLEADMWSIGVITYILLSGASPFLGETKQETLTN 229
Query: 90 ISRGQFITPDTLSSK----AKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
IS + + S AK IR LL +DP R+ +L H W++
Sbjct: 230 ISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFN---DSEHTSLFLKISRGQFITP 98
+V+PE+L + A D+WSLGV+LYT L G PF D + +I G+F
Sbjct: 186 FVAPEVLERQGYDA--ACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLS 243
Query: 99 ----DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
+++S AK L+ L DP +RL++ L HPW+
Sbjct: 244 GGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 38 GCPAYVSPEIL--RSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQF 95
G Y++PE++ R H + +AD WS GV+++ ML G PF + I + +
Sbjct: 188 GTVEYMAPEVVNRRGHTQ----SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL 243
Query: 96 ITPDTLSSKAKCLIRSLLRRDPSERLSS 123
P LS +A+ L+R L +R+P+ RL +
Sbjct: 244 GMPQFLSPEAQSLLRMLFKRNPANRLGA 271
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 38 GCPAYVSPEIL--RSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQF 95
G Y++PE++ R H + +AD WS GV+++ ML G PF + I + +
Sbjct: 188 GTVEYMAPEVVNRRGHTQ----SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL 243
Query: 96 ITPDTLSSKAKCLIRSLLRRDPSERLSS 123
P LS +A+ L+R L +R+P+ RL +
Sbjct: 244 GMPQFLSPEAQSLLRMLFKRNPANRLGA 271
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++P I+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPAIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 38 GCPAYVSPEIL--RSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQF 95
G Y++PE++ R H + +AD WS GV+++ ML G PF + I + +
Sbjct: 189 GTVEYMAPEVVNRRGHTQ----SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL 244
Query: 96 ITPDTLSSKAKCLIRSLLRRDPSERLSS 123
P LS +A+ L+R L +R+P+ RL +
Sbjct: 245 GMPQFLSPEAQSLLRMLFKRNPANRLGA 272
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEYLAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++ + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWF 297
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P ++PEI+ S +A D W+LGV++Y M G PF + ++ KI G+
Sbjct: 200 GTPEALAPEIILSKG--YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF 257
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSS-----EDTLHHPWL 132
P SS K L+R+LL+ D ++R + D +H W
Sbjct: 258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ + D+W GV+ Y LVG PF+ HT +I
Sbjct: 174 GTLDYLPPEMIE--GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
P LS +K LI LLR P +RL + + HPW++ +
Sbjct: 232 PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ + D+W GV+ Y LVG PF+ HT +I
Sbjct: 175 GTLDYLPPEMIE--GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 232
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
P LS +K LI LLR P +RL + + HPW++ +
Sbjct: 233 PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 270
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y+ PE++ + D+W GV+ Y LVG PF+ HT +I
Sbjct: 174 GTLDYLPPEMIE--GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
P LS +K LI LLR P +RL + + HPW++ +
Sbjct: 232 PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 12/137 (8%)
Query: 7 VIVIRDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGV 66
+ V RD+ +++ ++ + ++L+ G P +++PE++ + + DMWS+GV
Sbjct: 219 LCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVV--NYDFVSFPTDMWSVGV 276
Query: 67 ILYTMLVGRYPF---NDSEHTSLFLK----ISRGQFITPDTLSSKAKCLIRSLLRRDPSE 119
I Y +L G PF ND+E + L + +F +S +AK I LL ++ S
Sbjct: 277 IAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEF---QDISEEAKEFISKLLIKEKSW 333
Query: 120 RLSSEDTLHHPWLRESR 136
R+S+ + L HPWL + +
Sbjct: 334 RISASEALKHPWLSDHK 350
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 196 GTAQYVSPELLTEKS--AXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDF 253
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 254 PEKFFPKARDLVEKLLVLDATKRLGCEE 281
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 38 GCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI--SRG 93
G P Y+SPE+L+S Y GR D WS+GV L+ MLVG PF + KI +
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKN 296
Query: 94 QFITPD--TLSSKAKCLIRSLL--RRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPD 149
P+ +S AK LI + L R R E+ HP+ + + + + + P
Sbjct: 297 SLCFPEDAEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAP- 355
Query: 150 QMVPDIDFDM 159
+VP++ D+
Sbjct: 356 -VVPELSSDI 364
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 8/107 (7%)
Query: 40 PAYVSPEILRSHARYS-GRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITP 98
P Y +PEI+ ++ + G D+W+LG ILY + ++PF D L+I G++ P
Sbjct: 214 PMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK----LRIVNGKYSIP 269
Query: 99 --DTLSSKAKCLIRSLLRRDPSERLSSEDTLHH-PWLRESRDSSPET 142
DT + LIR++L+ +P ERLS + +H + +R+ +P++
Sbjct: 270 PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKS 316
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 196 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDF 253
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 254 PEKFFPKARDLVEKLLVLDATKRLGCEE 281
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 196 GTAQYVSPELLTEKS--ASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 254 PEKFFPKARDLVEKLLVLDATKRLGCEE 281
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 173 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 230
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 231 PEKFFPKARDLVEKLLVLDATKRLGCEE 258
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQF-ITPDT 100
+ +PEI+ G DMW++GV+ Y +L G PF + + R + D
Sbjct: 216 FAAPEIVDREP--VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDA 273
Query: 101 LSS---KAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
SS +AK I++LL+++P +RL+ D L HPWL+
Sbjct: 274 FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 178 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 235
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 236 PEKFFPKARDLVEKLLVLDATKRLGCEE 263
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 174 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 231
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 232 PEKFFPKARDLVEKLLVLDATKRLGCEE 259
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 172 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 229
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 230 PEKFFPKARDLVEKLLVLDATKRLGCEE 257
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 171 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 228
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 229 PEKFFPKARDLVEKLLVLDATKRLGCEE 256
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 193 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 250
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 251 PEKFFPKARDLVEKLLVLDATKRLGCEE 278
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 193 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 250
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 251 PEKFFPKARDLVEKLLVLDATKRLGCEE 278
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 201 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 258
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 259 PEKFFPKARDLVEKLLVLDATKRLGCEE 286
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 194 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 252 PEKFFPKARDLVEKLLVLDATKRLGCEE 279
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 194 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 252 PEKFFPKARDLVEKLLVLDATKRLGCEE 279
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 196 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 254 PEKFFPKARDLVEKLLVLDATKRLGCEE 281
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 194 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 252 PEKFFPKARDLVEKLLVLDATKRLGCEE 279
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 196 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 254 PEKFFPKARDLVEKLLVLDATKRLGCEE 281
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 194 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 251
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 252 PEKFFPKARDLVEKLLVLDATKRLGCEE 279
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 196 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 253
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 254 PEKFFPKARDLVEKLLVLDATKRLGCEE 281
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 197 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 254
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 255 PEKFFPKARDLVEKLLVLDATKRLGCEE 282
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 38 GCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI--SRG 93
G P Y+SPE+L+S Y GR D WS+GV LY MLVG PF + KI +
Sbjct: 231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN 290
Query: 94 QFITPD--TLSSKAKCLIRSLL 113
PD +S +AK LI + L
Sbjct: 291 SLTFPDDNDISKEAKNLICAFL 312
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 197 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 254
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P+ KA+ L+ LL D ++RL E+
Sbjct: 255 PEKFFPKARDLVEKLLVLDATKRLGCEE 282
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 38 GCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI--SRG 93
G P Y+SPE+L+S Y GR D WS+GV LY MLVG PF + KI +
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN 295
Query: 94 QFITPD--TLSSKAKCLIRSLL 113
PD +S +AK LI + L
Sbjct: 296 SLTFPDDNDISKEAKNLICAFL 317
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 38 GCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI--SRG 93
G P Y+SPE+L+S Y GR D WS+GV LY MLVG PF + KI +
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN 295
Query: 94 QFITPD--TLSSKAKCLIRSLL 113
PD +S +AK LI + L
Sbjct: 296 SLTFPDDNDISKEAKNLICAFL 317
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y++PEIL RA D WSLG ++Y ML G PF KI + +
Sbjct: 183 GTIEYMAPEILMRSGH--NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLS-----SEDTLHHPWLR 133
P L+ +A+ L++ LL+R+ + RL + + HP+ R
Sbjct: 241 PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y++PEIL RA D WSLG ++Y ML G PF KI + +
Sbjct: 183 GTIEYMAPEILMRSGH--NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLS-----SEDTLHHPWLR 133
P L+ +A+ L++ LL+R+ + RL + + HP+ R
Sbjct: 241 PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFND-SEHTSLFLKISRGQFI 96
G Y++PEI+ R G+AAD+WSLG + M G+ PF + E + K+ G F
Sbjct: 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV--GMFK 242
Query: 97 T----PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
P+++S++AK I DP +R + D L +L+ S
Sbjct: 243 VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVS 285
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G YVSPE+L + + +++D+W+LG I+Y ++ G PF +F KI + ++
Sbjct: 199 GTAQYVSPELLTEKS--ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF 256
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
P KA+ L+ LL D ++RL E+
Sbjct: 257 PAAFFPKARDLVEKLLVLDATKRLGCEE 284
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 18/132 (13%)
Query: 8 IVIRDSIKLETL----EDAVVLED---------SDNDELQDKRGCPAYVSPEILRSHARY 54
I+ RD IKLE + VVL D + + D G Y++P+I+R
Sbjct: 180 IIYRD-IKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSG 238
Query: 55 SGRAADMWSLGVILYTMLVGRYPFN-DSEHTS---LFLKISRGQFITPDTLSSKAKCLIR 110
+A D WSLGV++Y +L G PF D E S + +I + + P +S+ AK LI+
Sbjct: 239 HDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQ 298
Query: 111 SLLRRDPSERLS 122
LL +DP +RL
Sbjct: 299 RLLMKDPKKRLG 310
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 35 DKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQ 94
+ G Y++PE+ + + D+WS GV++Y +L G PF TSL +
Sbjct: 185 NAAGTALYMAPEVFKRDVTFK---CDIWSAGVVMYFLLTGCLPFTG---TSLEEVQQKAT 238
Query: 95 FITPDT------LSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
+ P+ L+ +A L++ +L +DP R S+ LHH W +++
Sbjct: 239 YKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFND-SEHTSLFLKISRGQFI 96
G Y++PEI+ R G+AAD+WSLG + M G+ PF + E + K+ G F
Sbjct: 171 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV--GMFK 228
Query: 97 T----PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
P+++S++AK I DP +R + D L +L+
Sbjct: 229 VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y++PE+L H + R D W LG +LY ML G PF ++ I
Sbjct: 201 GTPEYLAPEVL--HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL 258
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSED 125
+++ A+ L+ LL++D ++RL ++D
Sbjct: 259 KPNITNSARHLLEGLLQKDRTKRLGAKD 286
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G + +PE+ + + G DMWS+GV+ Y +L G PF + +
Sbjct: 212 GTAEFAAPEV--AEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM 269
Query: 98 PDT----LSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
D+ +S K IR LL DP+ R++ L HPWL
Sbjct: 270 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G + +PE+ + + G DMWS+GV+ Y +L G PF + +
Sbjct: 318 GTAEFAAPEV--AEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM 375
Query: 98 PDT----LSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
D+ +S K IR LL DP+ R++ L HPWL
Sbjct: 376 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 1 MKGVLRVIVIRDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAA- 59
M G +R+ +KL +ED V + G P Y+SPEIL++ GR
Sbjct: 210 MNGHIRLADFGSCLKL--MEDGTV-------QSSVAVGTPDYISPEILQAMEGGKGRYGP 260
Query: 60 --DMWSLGVILYTMLVGRYPFNDSEHTSLFLKI----SRGQFITPDT-LSSKAKCLIRSL 112
D WSLGV +Y ML G PF + KI R QF T T +S AK LIR L
Sbjct: 261 ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRL 320
Query: 113 L--RRDPSERLSSEDTLHHPWL 132
+ R + ED HP+
Sbjct: 321 ICSREHRLGQNGIEDFKKHPFF 342
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 10/138 (7%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R KL +L D + R Y PE + H +Y A +WSLG++LY
Sbjct: 176 RGCAKLIDFGSGALLHDEPYTDFDGTR---VYSPPEWISRH-QYHALPATVWSLGILLYD 231
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
M+ G PF + +I + P +S LIR L PS R S E+ L P
Sbjct: 232 MVCGDIPFERDQ------EILEAELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDP 285
Query: 131 WLRESRDSSPETQTYSPP 148
W++ + P + P
Sbjct: 286 WMQTPAEDVPLNPSKGGP 303
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF----NDSEHTSLFLKISRG 93
G P +++PE+L + D ++LGV LY M+ R PF E+ L ++
Sbjct: 351 GTPGFMAPELLLGEEY--DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408
Query: 94 QFITPDTLSSKAKCLIRSLLRRDPSERL-----SSEDTLHHPWLRESRDSSPETQTYSPP 148
PD S +K +LL++DP +RL S + HP R+ E +PP
Sbjct: 409 AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPP 468
Query: 149 DQMVPD 154
VPD
Sbjct: 469 --FVPD 472
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF----NDSEHTSLFLKISRG 93
G P +++PE+L + D ++LGV LY M+ R PF E+ L ++
Sbjct: 351 GTPGFMAPELLLGEEY--DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408
Query: 94 QFITPDTLSSKAKCLIRSLLRRDPSERL-----SSEDTLHHPWLRESRDSSPETQTYSPP 148
PD S +K +LL++DP +RL S + HP R+ E +PP
Sbjct: 409 AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPP 468
Query: 149 DQMVPD 154
VPD
Sbjct: 469 --FVPD 472
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF----NDSEHTSLFLKISRG 93
G P +++PE+L + D ++LGV LY M+ R PF E+ L ++
Sbjct: 351 GTPGFMAPELLLGEEY--DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408
Query: 94 QFITPDTLSSKAKCLIRSLLRRDPSERL-----SSEDTLHHPWLRESRDSSPETQTYSPP 148
PD S +K +LL++DP +RL S + HP R+ E +PP
Sbjct: 409 AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPP 468
Query: 149 DQMVPD 154
VPD
Sbjct: 469 --FVPD 472
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 51.6 bits (122), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 13/126 (10%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF----NDSEHTSLFLKISRG 93
G P +++PE+L + D ++LGV LY M+ R PF E+ L ++
Sbjct: 351 GTPGFMAPELLLGEEY--DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408
Query: 94 QFITPDTLSSKAKCLIRSLLRRDPSERL-----SSEDTLHHPWLRESRDSSPETQTYSPP 148
PD S +K +LL++DP +RL S + HP R+ E +PP
Sbjct: 409 AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPP 468
Query: 149 DQMVPD 154
VPD
Sbjct: 469 --FVPD 472
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 13 SIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTML 72
+IK+ A L+ DN L P Y +PE+ H S A DMWSLG ++Y +L
Sbjct: 142 TIKIIEFGQARQLKPGDNFRLLFT--APEYYAPEV-HQHDVVST-ATDMWSLGTLVYVLL 197
Query: 73 VGRYPFNDSEHTSLFLKISRGQFITPD----TLSSKAKCLIRSLLRRDPSERLSSEDTLH 128
G PF + + I ++ + +S +A + LL ++ R+++ + L
Sbjct: 198 SGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257
Query: 129 HPWLRE 134
HPWL++
Sbjct: 258 HPWLKQ 263
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P Y+SPEI + Y+ ++ D+W+LG +LY + ++ F +L LKI G F
Sbjct: 187 GTPYYLSPEICENKP-YNNKS-DIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-P 243
Query: 98 PDTL--SSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
P +L S + L+ L +R+P +R S L ++
Sbjct: 244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFI 280
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 38 GCPAYVSPEILR--SHARYSGRAA-------DMWSLGVILYTMLVGRYPFND--SEHTSL 86
G Y+ PE ++ S +R +G++ D+WSLG ILY M G+ PF ++ + L
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 277
Query: 87 FLKISRGQFIT-PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
I I PD + +++ L+RDP +R+S + L HP+++
Sbjct: 278 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 49.3 bits (116), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 33 LQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISR 92
++ + G Y++PE++++ RY+ + D W+LG +LY M+ G+ PF + ++ R
Sbjct: 342 IKGRVGTVGYMAPEVVKNE-RYT-FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER 399
Query: 93 GQFITPDTLSSK----AKCLIRSLLRRDPSERL-----SSEDTLHHPWLRE 134
P+ S + A+ L LL +DP+ERL S+ + HP ++
Sbjct: 400 LVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y +PE+L + Y G +MWSLGV LYT++ PF + E T
Sbjct: 191 GTIEYCAPEVLMGNP-YRGPELEMWSLGVTLYTLVFEENPFCELEET------VEAAIHP 243
Query: 98 PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
P +S + L+ LL+ P R + E + PW+ +
Sbjct: 244 PYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 38 GCPAYVSPEILR--SHARYSGRAA-------DMWSLGVILYTMLVGRYPFND--SEHTSL 86
G Y+ PE ++ S +R +G++ D+WSLG ILY M G+ PF ++ + L
Sbjct: 218 GAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 277
Query: 87 FLKISRGQFIT-PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
I I PD + +++ L+RDP +R+S + L HP+++
Sbjct: 278 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 38 GCPAYVSPEILR--SHARYSGRAA-------DMWSLGVILYTMLVGRYPFND--SEHTSL 86
G Y+ PE ++ S +R +G++ D+WSLG ILY M G+ PF ++ + L
Sbjct: 174 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 233
Query: 87 FLKISRGQFIT-PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
I I PD + +++ L+RDP +R+S + L HP+++
Sbjct: 234 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 38 GCPAYVSPEILR--SHARYSGRAA-------DMWSLGVILYTMLVGRYPFND--SEHTSL 86
G Y+ PE ++ S +R +G++ D+WSLG ILY M G+ PF ++ + L
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 249
Query: 87 FLKISRGQFIT-PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
I I PD + +++ L+RDP +R+S + L HP+++
Sbjct: 250 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 33 LQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISR 92
++ + G Y++PE++++ RY+ + D W+LG +LY M+ G+ PF + ++ R
Sbjct: 342 IKGRVGTVGYMAPEVVKNE-RYT-FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER 399
Query: 93 GQFITPDT----LSSKAKCLIRSLLRRDPSERL-----SSEDTLHHPWLRE 134
P+ S +A+ L LL +DP+ERL S+ + HP ++
Sbjct: 400 LVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 38 GCPAYVSPEILR--SHARYSGRAA-------DMWSLGVILYTMLVGRYPFND--SEHTSL 86
G Y+ PE ++ S +R +G++ D+WSLG ILY M G+ PF ++ + L
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 249
Query: 87 FLKISRGQFIT-PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
I I PD + +++ L+RDP +R+S + L HP+++
Sbjct: 250 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 38 GCPAYVSPEILR--SHARYSGRAA-------DMWSLGVILYTMLVGRYPFND--SEHTSL 86
G Y+ PE ++ S +R +G++ D+WSLG ILY M G+ PF ++ + L
Sbjct: 170 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 229
Query: 87 FLKISRGQFIT-PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
I I PD + +++ L+RDP +R+S + L HP+++
Sbjct: 230 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 34 QDKR----GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFL 88
Q KR G P +++PE++ A G D+WSLG++ M+ G P+ N++ +L+L
Sbjct: 170 QSKRSXMVGTPYWMAPEVVTRKAY--GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 89 KISRG--QFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESR 136
+ G + P+ LS+ + + L D +R S+++ L H +L+ ++
Sbjct: 228 IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAK 277
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 38 GCPAYVSPEILR--SHARYSGRAA-------DMWSLGVILYTMLVGRYPFND--SEHTSL 86
G Y+ PE ++ S +R +G++ D+WSLG ILY M G+ PF ++ + L
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 277
Query: 87 FLKISRGQFIT-PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
I I PD + +++ L+RDP +R+S + L HP+++
Sbjct: 278 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 38 GCPAYVSPEILR--SHARYSGRAA-------DMWSLGVILYTMLVGRYPFND--SEHTSL 86
G Y+ PE ++ S +R +G++ D+WSLG ILY M G+ PF ++ + L
Sbjct: 171 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 230
Query: 87 FLKISRGQFIT-PDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLR 133
I I PD + +++ L+RDP +R+S + L HP+++
Sbjct: 231 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 10 IRDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAA---DMWSLGV 66
+ I+L + + D + G P Y+SPEIL++ G+ D WSLGV
Sbjct: 210 VNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGV 269
Query: 67 ILYTMLVGRYPFNDSEHTSLFLKI----SRGQFITPDT-LSSKAKCLIRSLL 113
+Y ML G PF + KI R QF + T +S +AK LI+ L+
Sbjct: 270 CMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLI 321
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 10 IRDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAA---DMWSLGV 66
+ I+L + + D + G P Y+SPEIL++ G+ D WSLGV
Sbjct: 226 VNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGV 285
Query: 67 ILYTMLVGRYPFNDSEHTSLFLKI----SRGQFITPDT-LSSKAKCLIRSLL 113
+Y ML G PF + KI R QF + T +S +AK LI+ L+
Sbjct: 286 CMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLI 337
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 34 QDKR----GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFL 88
Q KR G P +++PE++ A G D+WSLG++ M+ G P+ N++ +L+L
Sbjct: 170 QSKRSEMVGTPYWMAPEVVTRKAY--GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 89 KISRG--QFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESR 136
+ G + P+ LS+ + + L D +R S+++ L H +L+ ++
Sbjct: 228 IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAK 277
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 34 QDKR----GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFL 88
Q KR G P +++PE++ A G D+WSLG++ M+ G P+ N++ +L+L
Sbjct: 171 QSKRSTMVGTPYWMAPEVVTRKAY--GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 89 KISRG--QFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESR 136
+ G + P+ LS+ + + L D +R S+++ + H +L+ ++
Sbjct: 229 IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAK 278
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 34 QDKR----GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFL 88
Q KR G P +++PE++ A G D+WSLG++ M+ G P+ N++ +L+L
Sbjct: 170 QSKRSTMVGTPYWMAPEVVTRKAY--GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227
Query: 89 KISRG--QFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESR 136
+ G + P+ LS+ + + L D +R S+++ L H +L+ ++
Sbjct: 228 IATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAK 277
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 34 QDKR----GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFL 88
Q KR G P +++PE++ A G D+WSLG++ M+ G P+ N++ +L+L
Sbjct: 171 QSKRSXMVGTPYWMAPEVVTRKAY--GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 228
Query: 89 KISRG--QFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESR 136
+ G + P+ LS+ + + L D +R S+++ + H +L+ ++
Sbjct: 229 IATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAK 278
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRG---Q 94
G P +++PE+++ AD+WSLG+ M G+ P+ D I
Sbjct: 187 GTPFWMAPEVIQEIGYNC--VADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPT 244
Query: 95 FITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSS 139
F P+ S ++ L + P +R ++ L HP++R ++ S
Sbjct: 245 FRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVS 289
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 31 DELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI 90
D L G YV+ E+L Y+ + DM+SLG+I + M+ YPF+ LK
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKI-DMYSLGIIFFEMI---YPFSTGMERVNILKK 240
Query: 91 SRGQFIT--PDTLSSKAKC---LIRSLLRRDPSERLSSEDTLHHPWL 132
R I PD +K K +IR L+ DP++R + L+ WL
Sbjct: 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDK-RGCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 198
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 199 AMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
Query: 127 LHHPW 131
W
Sbjct: 259 KKDRW 263
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 31 DELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI 90
D L G YV+ E+L Y+ + DM+SLG+I + M+ YPF+ LK
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKI-DMYSLGIIFFEMI---YPFSTGMERVNILKK 240
Query: 91 SRGQFIT--PDTLSSKAKC---LIRSLLRRDPSERLSSEDTLHHPWL 132
R I PD +K K +IR L+ DP++R + L+ WL
Sbjct: 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y++PE+L+ Y +AD +SLG +L+ +L G PF + T +I R
Sbjct: 352 GTHGYMAPEVLQKGVAYDS-SADWFSLGCMLFKLLRGHSPFRQHK-TKDKHEIDRMTLTM 409
Query: 98 ----PDTLSSKAKCLIRSLLRRDPSERL-----SSEDTLHHPWLRESRDSSPETQTYSPP 148
PD+ S + + L+ LL+RD + RL +++ P+ R Q Y PP
Sbjct: 410 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPP 469
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y++PE+L+ Y +AD +SLG +L+ +L G PF + T +I R
Sbjct: 352 GTHGYMAPEVLQKGVAYDS-SADWFSLGCMLFKLLRGHSPFRQHK-TKDKHEIDRMTLTM 409
Query: 98 ----PDTLSSKAKCLIRSLLRRDPSERL-----SSEDTLHHPWLRESRDSSPETQTYSPP 148
PD+ S + + L+ LL+RD + RL +++ P+ R Q Y PP
Sbjct: 410 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPP 469
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y++PE+L+ Y +AD +SLG +L+ +L G PF + T +I R
Sbjct: 351 GTHGYMAPEVLQKGVAYDS-SADWFSLGCMLFKLLRGHSPFRQHK-TKDKHEIDRMTLTM 408
Query: 98 ----PDTLSSKAKCLIRSLLRRDPSERL-----SSEDTLHHPWLRESRDSSPETQTYSPP 148
PD+ S + + L+ LL+RD + RL +++ P+ R Q Y PP
Sbjct: 409 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPP 468
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G Y++PE+L+ Y +AD +SLG +L+ +L G PF + T +I R
Sbjct: 352 GTHGYMAPEVLQKGVAYDS-SADWFSLGCMLFKLLRGHSPFRQHK-TKDKHEIDRMTLTM 409
Query: 98 ----PDTLSSKAKCLIRSLLRRDPSERL-----SSEDTLHHPWLRESRDSSPETQTYSPP 148
PD+ S + + L+ LL+RD + RL +++ P+ R Q Y PP
Sbjct: 410 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPP 469
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 38 GCPAYVSPEILRSHARYSGR--AADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQF 95
GC Y++PE + A G +D+WSLG+ LY + GR+P+ + S+F ++++
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY--PKWNSVFDQLTQVVK 244
Query: 96 ITPDTLSSKAK--------CLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTY 145
P LS+ + + L +D S+R ++ L HP++ + + E Y
Sbjct: 245 GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACY 302
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDK-RGCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 198
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 199 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
Query: 127 LHHPW 131
W
Sbjct: 259 KKDRW 263
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDK-RGCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 198
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 199 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
Query: 127 LHHPW 131
W
Sbjct: 259 KKDRW 263
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDK-RGCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 199
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 259
Query: 127 LHHPW 131
W
Sbjct: 260 KKDRW 264
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 39 CPAYVSPEILRSHARYSGR-AADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQF-- 95
PA+V+PE L+ + R +ADMWS V+L+ ++ PF D + + +K++
Sbjct: 171 APAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP 230
Query: 96 ITPDTLSSKAKCLIRSLLRRDPSER 120
P +S L++ + DP++R
Sbjct: 231 TIPPGISPHVSKLMKICMNEDPAKR 255
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDK-RGCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 198
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 199 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
Query: 127 LHHPW 131
W
Sbjct: 259 KKDRW 263
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKR-GCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 198
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 199 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
Query: 127 LHHPW 131
W
Sbjct: 259 KKDRW 263
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKR-GCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 199
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 259
Query: 127 LHHPW 131
W
Sbjct: 260 KKDRW 264
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKR-GCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 199
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 259
Query: 127 LHHPW 131
W
Sbjct: 260 KKDRW 264
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKR-GCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 198
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 199 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
Query: 127 LHHPW 131
W
Sbjct: 259 KKDRW 263
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKR-GCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 199
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 259
Query: 127 LHHPW 131
W
Sbjct: 260 KKDRW 264
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKR-GCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 199
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 259
Query: 127 LHHPW 131
W
Sbjct: 260 KKDRW 264
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKR-GCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 199
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 259
Query: 127 LHHPW 131
W
Sbjct: 260 KKDRW 264
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKR-GCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 198
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 199 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
Query: 127 LHHPW 131
W
Sbjct: 259 KKDRW 263
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKR-GCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 198
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 199 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
Query: 127 LHHPW 131
W
Sbjct: 259 KKDRW 263
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKR-GCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 198
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 199 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
Query: 127 LHHPW 131
W
Sbjct: 259 KKDRW 263
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKR-GCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 199
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 259
Query: 127 LHHPW 131
W
Sbjct: 260 KKDRW 264
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKR-GCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 139 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 197
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 198 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 257
Query: 127 LHHPW 131
W
Sbjct: 258 KKDRW 262
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKR-GCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 198
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 199 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
Query: 127 LHHPW 131
W
Sbjct: 259 KKDRW 263
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKR-GCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 198
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 199 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
Query: 127 LHHPW 131
W
Sbjct: 259 KKDRW 263
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKR-GCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 140 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 198
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 199 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 258
Query: 127 LHHPW 131
W
Sbjct: 259 KKDRW 263
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYP-FNDSEHTSLFLKISRG--- 93
G P +++PE++ S Y G D+WSLG+++ M+ G P FN+ ++ K+ R
Sbjct: 187 GTPYWMAPELI-SRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM--KMIRDNLP 242
Query: 94 -QFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQMV 152
+ +S K + LL RDP++R ++ + L HP+L ++ PP +V
Sbjct: 243 PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA----------GPPASIV 292
Query: 153 P 153
P
Sbjct: 293 P 293
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYP-FNDSEHTSLFLKISRG--- 93
G P +++PE++ S Y G D+WSLG+++ M+ G P FN+ ++ K+ R
Sbjct: 189 GTPYWMAPELI-SRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM--KMIRDNLP 244
Query: 94 -QFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQMV 152
+ +S K + LL RDP++R ++ + L HP+L ++ PP +V
Sbjct: 245 PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA----------GPPASIV 294
Query: 153 P 153
P
Sbjct: 295 P 295
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYP-FNDSEHTSLFLKISRG--- 93
G P +++PE++ S Y G D+WSLG+++ M+ G P FN+ ++ K+ R
Sbjct: 178 GTPYWMAPELI-SRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM--KMIRDNLP 233
Query: 94 -QFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQMV 152
+ +S K + LL RDP++R ++ + L HP+L ++ PP +V
Sbjct: 234 PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA----------GPPASIV 283
Query: 153 P 153
P
Sbjct: 284 P 284
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKR-GCPAYVSPEILRSHARYSGRAADMWSLGVILY 69
RD++K+ A V ++ + L +K G YV+PE+L+ + D+WS G++L
Sbjct: 141 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR-EFHAEPVDVWSCGIVLT 199
Query: 70 TMLVGRYPFN---DSEHTSLFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDT 126
ML G P++ DS K + + S L+ +L +PS R++ D
Sbjct: 200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 259
Query: 127 LHHPW 131
W
Sbjct: 260 KKDRW 264
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 38 GCPAYVSPEIL--RSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS---LFLKISR 92
G Y++PE+ R A YS A D WSLGV Y +L GR P++ TS +
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSF-AVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFET 234
Query: 93 GQFITPDTLSSKAKCLIRSLLRRDPSERLSS-EDTLHHPWLRE 134
P S + L++ LL +P +R S D + P++ +
Sbjct: 235 TVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYP-FNDSEHTSLFLKISRG--- 93
G P +++PE++ S Y G D+WSLG+++ M+ G P FN+ ++ K+ R
Sbjct: 182 GTPYWMAPELI-SRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM--KMIRDNLP 237
Query: 94 -QFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQMV 152
+ +S K + LL RDP++R ++ + L HP+L ++ PP +V
Sbjct: 238 PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA----------GPPASIV 287
Query: 153 P 153
P
Sbjct: 288 P 288
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
+ ++KL A +L + D D ++ G P Y+SPE + + +D+WSLG +LY
Sbjct: 152 KQNVKLGDFGLARIL-NHDEDFAKEFVGTPYYMSPEQMNRMS--YNEKSDIWSLGCLLYE 208
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQF-ITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
+ PF L KI G+F P S + +I +L R S E+ L +
Sbjct: 209 LCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268
Query: 130 PWLRE 134
P + E
Sbjct: 269 PLILE 273
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYP-FNDSEHTSLFLKISRG--- 93
G P +++PE++ S Y G D+WSLG+++ M+ G P FN+ ++ K+ R
Sbjct: 232 GTPYWMAPELI-SRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM--KMIRDNLP 287
Query: 94 -QFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQMV 152
+ +S K + LL RDP++R ++ + L HP+L ++ PP +V
Sbjct: 288 PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA----------GPPASIV 337
Query: 153 P 153
P
Sbjct: 338 P 338
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYP-FNDSEHTSLFLKISRG--- 93
G P +++PE++ S Y G D+WSLG+++ M+ G P FN+ ++ K+ R
Sbjct: 309 GTPYWMAPELI-SRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM--KMIRDNLP 364
Query: 94 -QFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQMV 152
+ +S K + LL RDP++R ++ + L HP+L ++ PP +V
Sbjct: 365 PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA----------GPPASIV 414
Query: 153 P 153
P
Sbjct: 415 P 415
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 13/105 (12%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYP-FNDSEHTSLFLKISRGQFI 96
G P +++PE++ S + Y+ D+WSLG+++ M+ G P F+DS ++ R +
Sbjct: 203 GTPYWMAPEVI-SRSLYATEV-DIWSLGIMVIEMVDGEPPYFSDSPVQAM----KRLRDS 256
Query: 97 TPDTLSSKAKC------LIRSLLRRDPSERLSSEDTLHHPWLRES 135
P L + K + +L RDP ER ++++ L HP+L ++
Sbjct: 257 PPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT 301
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 41/143 (28%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGR--YPFNDSEHTSLFLKISRGQFITPD 99
Y +PE++ + A+YS RA D+WS G IL + + R +P D H L + G TP
Sbjct: 188 YRAPEVMLTSAKYS-RAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI---FGIIGTPH 243
Query: 100 T---------------------------------LSSKAKCLIRSLLRRDPSERLSSEDT 126
+ ++ K L++ +L DP++R+++++
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 127 LHHPWLRESRDSS--PETQTYSP 147
L HP+L+ D + PE + P
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPP 326
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 41/143 (28%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGR--YPFNDSEHTSLFLKISRGQFITPD 99
Y +PE++ + A+YS RA D+WS G IL + + R +P D H L + G TP
Sbjct: 188 YRAPEVMLTSAKYS-RAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI---FGIIGTPH 243
Query: 100 T---------------------------------LSSKAKCLIRSLLRRDPSERLSSEDT 126
+ ++ K L++ +L DP++R+++++
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 127 LHHPWLRESRDSS--PETQTYSP 147
L HP+L+ D + PE + P
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPP 326
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 29/126 (23%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P +++PE++ S Y G D+WSLG+++ M+ G P+ + +I
Sbjct: 203 GTPYWMAPEVI-SRLPY-GTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIR------ 254
Query: 98 PDTLSSKAKCL--IRSLLR--------RDPSERLSSEDTLHHPWLRESRDSSPETQTYSP 147
D+L + K L + S+LR R+PS+R ++++ L HP+L+ + P
Sbjct: 255 -DSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLKLA----------GP 303
Query: 148 PDQMVP 153
P +VP
Sbjct: 304 PSCIVP 309
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 41/143 (28%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGR--YPFNDSEHTSLFLKISRGQFITPD 99
Y +PE++ + A+YS RA D+WS G IL + + R +P D H L + G TP
Sbjct: 188 YRAPEVMLTSAKYS-RAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI---FGIIGTPH 243
Query: 100 T---------------------------------LSSKAKCLIRSLLRRDPSERLSSEDT 126
+ ++ K L++ +L DP++R+++++
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 127 LHHPWLRESRDSS--PETQTYSP 147
L HP+L+ D + PE + P
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPP 326
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 38 GCPAYVSPEIL---RSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQ 94
G P +++PE++ S R AD+WSLG+ L M P ++ + LKI++ +
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 256
Query: 95 ---FITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
P SS K ++ L ++ R ++ L HP++
Sbjct: 257 PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
S ++ + G P + +PE+L + A DMWS GVI ++L GRYPF
Sbjct: 198 SRRQQVAPRAGTPGFRAPEVL-TKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 38 GCPAYVSPEIL---RSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQ 94
G P +++PE++ S R AD+WSLG+ L M P ++ + LKI++ +
Sbjct: 171 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 230
Query: 95 ---FITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
P SS K ++ L ++ R ++ L HP++
Sbjct: 231 PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 271
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
G Y SPE + A + D++S+G++LY MLVG PFN S+ +K
Sbjct: 174 GTVQYFSPEQAKGEA--TDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIK 223
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 38 GCPAYVSPEIL---RSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQ 94
G P +++PE++ S R AD+WSLG+ L M P ++ + LKI++ +
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 256
Query: 95 ---FITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
P SS K ++ L ++ R ++ L HP++
Sbjct: 257 PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 38 GCPAYVSPEIL---RSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQ 94
G P +++PE++ S R AD+WSLG+ L M P ++ + LKI++ +
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 256
Query: 95 ---FITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
P SS K ++ L ++ R ++ L HP++
Sbjct: 257 PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 48/127 (37%), Gaps = 35/127 (27%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF---NDSEHTSLFLKISRG----- 93
Y +P++L YS + D+WS G IL M+ G+ F ND E L I
Sbjct: 174 YRAPDVLMGSRTYS-TSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESL 232
Query: 94 -----------------------QFITPDT---LSSKAKCLIRSLLRRDPSERLSSEDTL 127
Q + P T L + LL+ +P RLS++ L
Sbjct: 233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQAL 292
Query: 128 HHPWLRE 134
HHPW E
Sbjct: 293 HHPWFAE 299
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 32/139 (23%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISR------GQF 95
Y +PE++ S Y+ + D+WS+G I+ ML G+ F ++ +I + +F
Sbjct: 207 YRAPEVILSWMHYN-QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF 265
Query: 96 IT--------------PDT-----------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
+ P T S +A L+ +L D +RL++ L HP
Sbjct: 266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 325
Query: 131 WLRESRDSSPETQTYSPPD 149
+ RD ET+ P D
Sbjct: 326 FFEPFRDPEEETEAQQPFD 344
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 16 LETLEDAVVLED----SDNDELQDKR----GCPAYVSPEILRSHARYSG---RAADMWSL 64
L TLE + L D + N + KR G P +++PE++ AD+WSL
Sbjct: 141 LMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSL 200
Query: 65 GVILYTMLVGRYPFNDSEHTSLFLKISRG---QFITPDTLSSKAKCLIRSLLRRDPSERL 121
G+ L M P ++ + LKI++ +TP S + + ++ L ++P R
Sbjct: 201 GITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRP 260
Query: 122 SSEDTLHHPWL 132
S+ L HP++
Sbjct: 261 SAAQLLEHPFV 271
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 16 LETLEDAVVLED----SDNDELQDKR----GCPAYVSPEILRSHARYSG---RAADMWSL 64
L TLE + L D + N + KR G P +++PE++ AD+WSL
Sbjct: 149 LMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSL 208
Query: 65 GVILYTMLVGRYPFNDSEHTSLFLKISRG---QFITPDTLSSKAKCLIRSLLRRDPSERL 121
G+ L M P ++ + LKI++ +TP S + + ++ L ++P R
Sbjct: 209 GITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRP 268
Query: 122 SSEDTLHHPWL 132
S+ L HP++
Sbjct: 269 SAAQLLEHPFV 279
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 32/139 (23%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISR------GQF 95
Y +PE++ S Y+ + D+WS+G I+ ML G+ F ++ +I + +F
Sbjct: 189 YRAPEVILSWMHYN-QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF 247
Query: 96 IT--------------PDT-----------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
+ P T S +A L+ +L D +RL++ L HP
Sbjct: 248 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 307
Query: 131 WLRESRDSSPETQTYSPPD 149
+ RD ET+ P D
Sbjct: 308 FFEPFRDPEEETEAQQPFD 326
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P +++PE+++ A S AD+WSLG+ + G P +D + I +
Sbjct: 182 GTPFWMAPEVIQQSAYDS--KADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN---N 236
Query: 98 PDTL----SSKAKCLIRSLLRRDPSERLSSEDTLHHPWL-RESRDSSPETQ 143
P TL + K I + L +DPS R ++++ L H ++ + S+ +S T+
Sbjct: 237 PPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSYLTE 287
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 31 DELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI 90
D L G YV+ E+L Y+ + D +SLG+I + + YPF+ LK
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYNEKI-DXYSLGIIFFEXI---YPFSTGXERVNILKK 240
Query: 91 SRGQFIT--PDTLSSKAKC---LIRSLLRRDPSERLSSEDTLHHPWL 132
R I PD +K K +IR L+ DP++R + L+ WL
Sbjct: 241 LRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P +++PE+++ A S AD+WSLG+ + G P ++ + I +
Sbjct: 186 GTPFWMAPEVIKQSAYDS--KADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN--- 240
Query: 98 PDTL----SSKAKCLIRSLLRRDPSERLSSEDTLHHPW-LRESRDSSPETQ 143
P TL S K + + L ++PS R ++++ L H + LR ++ +S T+
Sbjct: 241 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTE 291
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 55/137 (40%), Gaps = 34/137 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 173 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 229
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 230 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 289
Query: 131 WLRESRDSSPETQTYSP 147
+ ++ P + P
Sbjct: 290 FFQDVTKPVPHLRLERP 306
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P +++PE+++ A S AD+WSLG+ + G P ++ + I +
Sbjct: 181 GTPFWMAPEVIKQSAYDS--KADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN---N 235
Query: 98 PDTL----SSKAKCLIRSLLRRDPSERLSSEDTLHHPW-LRESRDSS 139
P TL S K + + L ++PS R ++++ L H + LR ++ +S
Sbjct: 236 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTS 282
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQF-I 96
G P Y+SPE + + +D+WSLG +LY + PF L KI G+F
Sbjct: 178 GTPYYMSPEQMNRMS--YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
Query: 97 TPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
P S + +I +L R S E+ L +P + E
Sbjct: 236 IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P +++PE+++ A S AD+WSLG+ + G P ++ + I +
Sbjct: 166 GTPFWMAPEVIKQSAYDS--KADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN---N 220
Query: 98 PDTL----SSKAKCLIRSLLRRDPSERLSSEDTLHHPW-LRESRDSSPETQ 143
P TL S K + + L ++PS R ++++ L H + LR ++ +S T+
Sbjct: 221 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTE 271
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P +++PE+++ A S AD+WSLG+ + G P ++ + I +
Sbjct: 166 GTPFWMAPEVIKQSAYDS--KADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN---N 220
Query: 98 PDTL----SSKAKCLIRSLLRRDPSERLSSEDTLHHPW-LRESRDSSPETQ 143
P TL S K + + L ++PS R ++++ L H + LR ++ +S T+
Sbjct: 221 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTE 271
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQF-I 96
G P Y+SPE + + +D+WSLG +LY + PF L KI G+F
Sbjct: 178 GTPYYMSPEQMNRMS--YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
Query: 97 TPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
P S + +I +L R S E+ L +P + E
Sbjct: 236 IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 8/142 (5%)
Query: 7 VIVIRDSIKLETLEDAVVLEDSDNDELQDKR--GCPAYVSPEILRSHARYSGRAADMWSL 64
+I +++K+ A + DS N Q G Y+SPE R + R+ D++SL
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARS-DVYSL 205
Query: 65 GVILYTMLVGRYPFNDSEHTSLFLKISRGQFITP----DTLSSKAKCLIRSLLRRDPSER 120
G +LY +L G PF S+ + R I P + LS+ ++ L ++P R
Sbjct: 206 GCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
Query: 121 LSSEDTLHHPWLRESRDSSPET 142
+ + +R PE
Sbjct: 266 YQTAAEMRADLVRVHNGEPPEA 287
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 8/142 (5%)
Query: 7 VIVIRDSIKLETLEDAVVLEDSDNDELQDKR--GCPAYVSPEILRSHARYSGRAADMWSL 64
+I +++K+ A + DS N Q G Y+SPE R + R+ D++SL
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARS-DVYSL 205
Query: 65 GVILYTMLVGRYPFNDSEHTSLFLKISRGQFITP----DTLSSKAKCLIRSLLRRDPSER 120
G +LY +L G PF S+ + R I P + LS+ ++ L ++P R
Sbjct: 206 GCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
Query: 121 LSSEDTLHHPWLRESRDSSPET 142
+ + +R PE
Sbjct: 266 YQTAAEMRADLVRVHNGEPPEA 287
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 8/142 (5%)
Query: 7 VIVIRDSIKLETLEDAVVLEDSDNDELQDKR--GCPAYVSPEILRSHARYSGRAADMWSL 64
+I +++K+ A + DS N Q G Y+SPE R + R+ D++SL
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARS-DVYSL 205
Query: 65 GVILYTMLVGRYPFNDSEHTSLFLKISRGQFITP----DTLSSKAKCLIRSLLRRDPSER 120
G +LY +L G PF S+ + R I P + LS+ ++ L ++P R
Sbjct: 206 GCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
Query: 121 LSSEDTLHHPWLRESRDSSPET 142
+ + +R PE
Sbjct: 266 YQTAAEMRADLVRVHNGEPPEA 287
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 172 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 228
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 229 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 289 FFQDVTKPVPH 299
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 38 GCPAYVSPEILRSH----ARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRG 93
G P +++PE++ A Y ++ D+WSLG+ M G P D I R
Sbjct: 191 GTPYWMAPEVIACDENPDATYDFKS-DLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN 249
Query: 94 QF--ITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
+ S K + I S L ++ S+R ++E + HP++R+
Sbjct: 250 PAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ 293
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 38/143 (26%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVG----------------RYPFND--SEH 83
Y SPE+L +Y G D+W++G + +L G R D H
Sbjct: 168 YRSPELLVGDTQY-GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRH 226
Query: 84 TSLFLKISRGQFIT----PD------------TLSSKAKCLIRSLLRRDPSERLSSEDTL 127
+F S Q+ + PD +S A L++ L DP+ERL+ E L
Sbjct: 227 QQVF---STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLL 283
Query: 128 HHPWLRESRDSSPETQTYSPPDQ 150
HHP+ R+ + + P +
Sbjct: 284 HHPYFENIREIEDLAKEHDKPAE 306
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 168 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 224
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 285 FFQDVTKPVPH 295
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 168 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 224
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 285 FFQDVTKPVPH 295
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 171 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 227
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 228 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 287
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 288 FFQDVTKPVPH 298
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 8/142 (5%)
Query: 7 VIVIRDSIKLETLEDAVVLEDSDNDELQDKR--GCPAYVSPEILRSHARYSGRAADMWSL 64
+I +++K+ A + DS N Q G Y+SPE R + R+ D++SL
Sbjct: 148 LISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDS-VDARS-DVYSL 205
Query: 65 GVILYTMLVGRYPFNDSEHTSLFLKISRGQFITP----DTLSSKAKCLIRSLLRRDPSER 120
G +LY +L G PF S+ + R I P + LS+ ++ L ++P R
Sbjct: 206 GCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
Query: 121 LSSEDTLHHPWLRESRDSSPET 142
+ + +R PE
Sbjct: 266 YQTAAEMRADLVRVHNGEPPEA 287
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 169 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 225
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 286 FFQDVTKPVPH 296
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 168 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 224
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 285 FFQDVTKPVPH 295
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 168 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 224
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 285 FFQDVTKPVPH 295
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 170 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 226
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 227 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 286
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 287 FFQDVTKPVPH 297
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 169 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 225
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 286 FFQDVTKPVPH 296
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 168 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 224
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 285 FFQDVTKPVPH 295
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 169 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 225
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 286 FFQDVTKPVPH 296
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 171 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 227
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 228 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 287
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 288 FFQDVTKPVPH 298
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 171 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 227
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 228 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 287
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 288 FFQDVTKPVPH 298
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 169 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 225
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 286 FFQDVTKPVPH 296
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 173 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 229
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 230 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 289
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 290 FFQDVTKPVPH 300
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 170 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 226
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 227 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 286
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 287 FFQDVTKPVPH 297
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 169 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 225
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 286 FFQDVTKPVPH 296
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 168 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 224
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 285 FFQDVTKPVPH 295
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 176 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 232
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 233 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 292
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 293 FFQDVTKPVPH 303
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 170 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 226
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 227 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 286
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 287 FFQDVTKPVPH 297
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 170 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 226
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 227 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 286
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 287 FFQDVTKPVPH 297
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 170 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 226
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 227 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 286
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 287 FFQDVTKPVPH 297
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 172 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 228
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 229 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 289 FFQDVTKPVPH 299
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 172 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 228
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 229 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 289 FFQDVTKPVPH 299
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 169 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 225
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 286 FFQDVTKPVPH 296
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 172 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 228
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 229 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 289 FFQDVTKPVPH 299
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 171 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 227
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 228 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 287
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 288 FFQDVTKPVPH 298
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 169 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 225
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 286 FFQDVTKPVPH 296
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 172 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 228
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 229 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 289 FFQDVTKPVPH 299
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 169 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 225
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 286 FFQDVTKPVPH 296
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 172 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 228
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 229 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 289 FFQDVTKPVPH 299
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL YS A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 176 YRAPEILLGXKYYS-TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 232
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 233 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 292
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 293 FFQDVTKPVPH 303
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 62/156 (39%), Gaps = 50/156 (32%)
Query: 26 EDSDNDE--LQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGR-------- 75
E+ D+D+ L D Y +PEIL +Y+ + DMWSLG IL +L G+
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYT-KGIDMWSLGCILGEILCGKPIFPGSST 236
Query: 76 -----------------------YPFNDSEHTSLFLKISRGQFITPDTLSS--------- 103
PF + SL K+ Q D +
Sbjct: 237 MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKIN 296
Query: 104 -KAKC------LIRSLLRRDPSERLSSEDTLHHPWL 132
KA C L+ LL+ +P++R+S+ D L HP++
Sbjct: 297 PKADCNEEALDLLDKLLQFNPNKRISANDALKHPFV 332
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 34/131 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL YS A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 169 YRAPEILLGXKYYS-TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 225
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 131 WLRESRDSSPE 141
+ ++ P
Sbjct: 286 FFQDVTKPVPH 296
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFI- 96
G A+++PE++R A + +D+WS GV+L+ +L G PF + ++ ++ +
Sbjct: 176 GAYAWMAPEVIR--ASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLAL 233
Query: 97 -TPDTLSSKAKCLIRSLLRRDPSERLSSEDTL 127
P T L+ DP R S + L
Sbjct: 234 PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 34/137 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISR------GQF 95
Y +PE++ + RY+ + D+WS+G I+ M+ G+ F S+H +I + +F
Sbjct: 191 YRAPEVILNWMRYT-QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 249
Query: 96 IT--------------PD-----------TLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
+ P+ S A L+ +L D +R+++ + L HP
Sbjct: 250 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 309
Query: 131 WLRESRDS--SPETQTY 145
+ D+ P+ Q Y
Sbjct: 310 YFESLHDTEDEPQVQKY 326
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 8/142 (5%)
Query: 7 VIVIRDSIKLETLEDAVVLEDSDNDELQDKR--GCPAYVSPEILRSHARYSGRAADMWSL 64
+I +++K+ A + DS N Q G Y+SPE R + R+ D++SL
Sbjct: 148 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARS-DVYSL 205
Query: 65 GVILYTMLVGRYPFNDSEHTSLFLKISRGQFITP----DTLSSKAKCLIRSLLRRDPSER 120
G +LY +L G PF S+ + R I P + LS+ ++ L ++P R
Sbjct: 206 GCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
Query: 121 LSSEDTLHHPWLRESRDSSPET 142
+ + +R PE
Sbjct: 266 YQTAAEMRADLVRVHNGEPPEA 287
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 34/124 (27%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISRGQFITPDT 100
Y +PEIL +Y A D+WSLG I M+ R F DSE LF +I R TPD
Sbjct: 169 YRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF-RIFR-TLGTPDE 225
Query: 101 ------------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
L + L+ +L DP++R+S++ L HP
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 131 WLRE 134
+ ++
Sbjct: 286 FFQD 289
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHT--SLFLKISRGQF 95
G P Y+SPE R H +D+WSLG +LY M + PF + SL KI + +
Sbjct: 198 GTPYYMSPE--RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY 255
Query: 96 --ITPDTLSSKAKCLIRSLLRRDPSER 120
+ D S + + L+ + DP +R
Sbjct: 256 PPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 34/149 (22%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ D+WS+G I+ +L GR F ++H + +
Sbjct: 205 DDEMTGYVATRWYRAPEIMLNWMHYN-MTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQ 263
Query: 90 ISRGQFITPDTLSSK-------------------------------AKCLIRSLLRRDPS 118
I R P ++ S+ A L+ +L D
Sbjct: 264 IMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTD 323
Query: 119 ERLSSEDTLHHPWLRESR--DSSPETQTY 145
+R+++ + L HP+ + D PE++ Y
Sbjct: 324 KRITASEALAHPYFSQYHDPDDEPESEPY 352
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 32 ELQDKRGCPAYVSPEILR-SHARYSGRAADMWSLGVILYTMLV-GRYPFNDSEHTSLFLK 89
L + G + +PE+L S R R+ D++S+G + Y +L G++PF D S
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK--YSRESN 263
Query: 90 ISRGQF-------ITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
I RG F + +L ++A LI ++ DP +R ++ L HP
Sbjct: 264 IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 32 ELQDKRGCPAYVSPEILR-SHARYSGRAADMWSLGVILYTMLV-GRYPFNDSEHTSLFLK 89
L + G + +PE+L S R R+ D++S+G + Y +L G++PF D S
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK--YSRESN 263
Query: 90 ISRGQF-------ITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
I RG F + +L ++A LI ++ DP +R ++ L HP
Sbjct: 264 IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPF-NDSEHT 84
S + + + G +++PE++R + YS ++ D+++ G++LY ++ G+ P+ N +
Sbjct: 163 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS-DVYAFGIVLYELMTGQLPYSNINNRD 221
Query: 85 SLFLKISRGQFITPDTLSSKAKC------LIRSLLRRDPSER 120
+ + RG +++PD ++ C L+ L++ ER
Sbjct: 222 QIIFMVGRG-YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 262
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPF-NDSEHT 84
S + + + G +++PE++R + YS ++ D+++ G++LY ++ G+ P+ N +
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS-DVYAFGIVLYELMTGQLPYSNINNRD 216
Query: 85 SLFLKISRGQFITPDTLSSKAKC------LIRSLLRRDPSER 120
+ + RG +++PD ++ C L+ L++ ER
Sbjct: 217 QIIFMVGRG-YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 257
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPF-NDSEHT 84
S + + + G +++PE++R + YS ++ D+++ G++LY ++ G+ P+ N +
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS-DVYAFGIVLYELMTGQLPYSNINNRD 216
Query: 85 SLFLKISRGQFITPDTLSSKAKC------LIRSLLRRDPSER 120
+ + RG +++PD ++ C L+ L++ ER
Sbjct: 217 QIIFMVGRG-YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 257
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPF-NDSEHT 84
S + + + G +++PE++R + YS ++ D+++ G++LY ++ G+ P+ N +
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS-DVYAFGIVLYELMTGQLPYSNINNRD 216
Query: 85 SLFLKISRGQFITPDTLSSKAKC------LIRSLLRRDPSER 120
+ + RG +++PD ++ C L+ L++ ER
Sbjct: 217 QIIFMVGRG-YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 257
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPF-NDSEHT 84
S + + + G +++PE++R + YS ++ D+++ G++LY ++ G+ P+ N +
Sbjct: 160 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS-DVYAFGIVLYELMTGQLPYSNINNRD 218
Query: 85 SLFLKISRGQFITPDTLSSKAKC------LIRSLLRRDPSER 120
+ + RG +++PD ++ C L+ L++ ER
Sbjct: 219 QIIFMVGRG-YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 259
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPF-NDSEHT 84
S + + + G +++PE++R + YS ++ D+++ G++LY ++ G+ P+ N +
Sbjct: 163 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS-DVYAFGIVLYELMTGQLPYSNINNRD 221
Query: 85 SLFLKISRGQFITPDTLSSKAKC------LIRSLLRRDPSER 120
+ + RG +++PD ++ C L+ L++ ER
Sbjct: 222 QIIFMVGRG-YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 262
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPF-NDSEHT 84
S + + + G +++PE++R + YS ++ D+++ G++LY ++ G+ P+ N +
Sbjct: 185 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS-DVYAFGIVLYELMTGQLPYSNINNRD 243
Query: 85 SLFLKISRGQFITPDTLSSKAKC------LIRSLLRRDPSER 120
+ + RG +++PD ++ C L+ L++ ER
Sbjct: 244 QIIFMVGRG-YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 284
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 39 CPAYVSPEILRSHARYSGR-AADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQF-- 95
PA+V+PE L+ + R +AD WS V+L+ ++ PF D + + K++
Sbjct: 171 APAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRP 230
Query: 96 ITPDTLSSKAKCLIRSLLRRDPSER 120
P +S L + DP++R
Sbjct: 231 TIPPGISPHVSKLXKICXNEDPAKR 255
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPF-NDSEHT 84
S + + + G +++PE++R + YS ++ D+++ G++LY ++ G+ P+ N +
Sbjct: 178 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS-DVYAFGIVLYELMTGQLPYSNINNRD 236
Query: 85 SLFLKISRGQFITPDTLSSKAKC------LIRSLLRRDPSER 120
+ + RG +++PD ++ C L+ L++ ER
Sbjct: 237 QIIFMVGRG-YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 277
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPF-NDSEHT 84
S + + + G +++PE++R + YS ++ D+++ G++LY ++ G+ P+ N +
Sbjct: 186 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS-DVYAFGIVLYELMTGQLPYSNINNRD 244
Query: 85 SLFLKISRGQFITPDTLSSKAKC------LIRSLLRRDPSER 120
+ + RG +++PD ++ C L+ L++ ER
Sbjct: 245 QIIFMVGRG-YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 285
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPF-NDSEHT 84
S + + + G +++PE++R + YS ++ D+++ G++LY ++ G+ P+ N +
Sbjct: 186 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS-DVYAFGIVLYELMTGQLPYSNINNRD 244
Query: 85 SLFLKISRGQFITPDTLSSKAKC------LIRSLLRRDPSER 120
+ + RG +++PD ++ C L+ L++ ER
Sbjct: 245 QIIFMVGRG-YLSPDLSKVRSNCPKAMKRLMAECLKKKRDER 285
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G +Y+SPE L+ YS ++ D+WS+G+ L M VGRYP + ++
Sbjct: 184 GTRSYMSPERLQG-THYSVQS-DIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNE 241
Query: 98 P------DTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRES 135
P S + + + L ++P+ER + + H +++ S
Sbjct: 242 PPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 285
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P +++PE+++ A Y +A D+WSLG+ + G P +D + I + +
Sbjct: 178 GTPFWMAPEVIKQSA-YDFKA-DIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN---S 232
Query: 98 PDTL----SSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
P TL S K + + L +DP R ++++ L H ++
Sbjct: 233 PPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFI 271
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 8/123 (6%)
Query: 7 VIVIRDSIKLETLEDAVVLEDSDNDELQDKR--GCPAYVSPEILRSHARYSGRAADMWSL 64
+I +++K+ A + DS N Q G Y+SPE R + + +D++SL
Sbjct: 165 MISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA--RSDVYSL 222
Query: 65 GVILYTMLVGRYPFNDSEHTSLFLKISRGQFITP----DTLSSKAKCLIRSLLRRDPSER 120
G +LY +L G PF S+ + R I P + LS+ ++ L ++P R
Sbjct: 223 GCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 282
Query: 121 LSS 123
+
Sbjct: 283 YQT 285
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 38 GCPAYVSPEILRSHARYSGRA--ADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISR--- 92
GC Y++PE + G + +D+WSLG+ + + + R+P+ DS T F ++ +
Sbjct: 215 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY-DSWGTP-FQQLKQVVE 272
Query: 93 --GQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPW--LRESRDS 138
+ D S++ L+++ ER + + + HP+ L ES+ +
Sbjct: 273 EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGT 322
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 38 GCPAYVSPEILRSHARYSGRA--ADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISR--- 92
GC Y++PE + G + +D+WSLG+ + + + R+P+ DS T F ++ +
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY-DSWGTP-FQQLKQVVE 228
Query: 93 --GQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPW--LRESRDS 138
+ D S++ L+++ ER + + + HP+ L ES+ +
Sbjct: 229 EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGT 278
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 32 ELQDKRGCPAYVSPEILRSH-----ARYSGRAADMWSLGVILYTMLV-GRYPFNDSEHTS 85
L + G + +PE+L R R+ D++S+G + Y +L G++PF D S
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK--YS 245
Query: 86 LFLKISRGQF-------ITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
I RG F + +L ++A LI ++ DP +R ++ L HP
Sbjct: 246 RESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 32 ELQDKRGCPAYVSPEILRSH-----ARYSGRAADMWSLGVILYTMLV-GRYPFNDSEHTS 85
L + G + +PE+L R R+ D++S+G + Y +L G++PF D S
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK--YS 245
Query: 86 LFLKISRGQF-------ITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHP 130
I RG F + +L ++A LI ++ DP +R ++ L HP
Sbjct: 246 RESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 32/139 (23%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGR--YPFNDSEHTSLFLKISRG------ 93
Y +PE++ S Y+ +A D+WS+G I ML R +P + H + + G
Sbjct: 228 YRAPELMLSLHEYT-QAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV 286
Query: 94 -QFITPDTLSS----------------------KAKCLIRSLLRRDPSERLSSEDTLHHP 130
Q + + + + +A L+ +LR +PS R+S+ L HP
Sbjct: 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP 346
Query: 131 WLRESRDSSPETQTYSPPD 149
+L + D E P D
Sbjct: 347 FLAKYHDPDDEPDCAPPFD 365
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 32/139 (23%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGR--YPFNDSEHTSLFLKISRG------ 93
Y +PE++ S Y+ +A D+WS+G I ML R +P + H + + G
Sbjct: 229 YRAPELMLSLHEYT-QAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAV 287
Query: 94 -QFITPDTLSS----------------------KAKCLIRSLLRRDPSERLSSEDTLHHP 130
Q + + + + +A L+ +LR +PS R+S+ L HP
Sbjct: 288 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP 347
Query: 131 WLRESRDSSPETQTYSPPD 149
+L + D E P D
Sbjct: 348 FLAKYHDPDDEPDCAPPFD 366
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R KL V L + E+Q+ G P Y++PE+L+ G AAD++SLG+ +
Sbjct: 193 RGRCKLGDFGLLVELGTAGAGEVQE--GDPRYMAPELLQGS---YGTAADVFSLGLTILE 247
Query: 71 MLVGRYPFNDSEHTSLFLKISRGQFITPD---TLSSKAKCLIRSLLRRDPSERLSSEDTL 127
+ + H + R ++ P+ LSS+ + ++ +L DP R ++E L
Sbjct: 248 VACNM----ELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALL 303
Query: 128 HHPWLRE 134
P LR+
Sbjct: 304 ALPVLRQ 310
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P+
Sbjct: 191 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPEQE 248
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 249 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 308
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 309 PYLEQYYDPSDEPIAEAP 326
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITP--- 98
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 213 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 270
Query: 99 --------------DTLSSKAKC---------------LIRSLLRRDPSERLSSEDTLHH 129
+L SK K L+ +L +P++R++ E+ L H
Sbjct: 271 DLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAH 330
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D + E P
Sbjct: 331 PYLEQYYDPTDEPVAEEP 348
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 13 SIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEIL--RSHARYSGRAADMWSLGVILYT 70
I +E A+ L+D +R +Y +PE+ +SH R D+WSLG +LY
Sbjct: 185 CIHVEGSRQALTLQD-----WAAQRCTISYRAPELFSVQSHCVIDERT-DVWSLGCVLYA 238
Query: 71 MLVGRYPFN--DSEHTSLFLKISRGQFITPDT--LSSKAKCLIRSLLRRDPSER 120
M+ G P++ + S+ L + + Q P + SS L+ S++ DP +R
Sbjct: 239 MMFGEGPYDMVFQKGDSVALAV-QNQLSIPQSPRHSSALWQLLNSMMTVDPHQR 291
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Query: 38 GCPAYVSPEILRSHARYSGRA-----ADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI 90
G P Y+SPEIL++ G D W+LGV Y M G+ PF + KI
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI 282
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 33 LQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISR 92
+ + +G A+++PE+ + YS + D++S G+IL+ ++ R PF++ + + +
Sbjct: 161 MTNNKGSAAWMAPEVFEG-SNYSEKC-DVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV 218
Query: 93 GQFITPDTLSSKAKCLIRSLLRR----DPSERLSSEDTL 127
P + + K I SL+ R DPS+R S E+ +
Sbjct: 219 HNGTRPPLIKNLPK-PIESLMTRCWSKDPSQRPSMEEIV 256
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 33 LQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISR 92
+ + +G A+++PE+ + YS + D++S G+IL+ ++ R PF++ + + +
Sbjct: 160 MTNNKGSAAWMAPEVFEG-SNYSEKC-DVFSWGIILWEVITRRKPFDEIGGPAFRIMWAV 217
Query: 93 GQFITPDTLSSKAKCLIRSLLRR----DPSERLSSEDTL 127
P + + K I SL+ R DPS+R S E+ +
Sbjct: 218 HNGTRPPLIKNLPK-PIESLMTRCWSKDPSQRPSMEEIV 255
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 201 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 258
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 259 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 318
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 319 PYLEQYYDPSDEPIAEAP 336
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 193 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 250
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 311 PYLEQYYDPSDEPIAEAP 328
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 31/121 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF---NDSEHTSLFLK--------- 89
Y SP +L S Y+ +A DMW+ G I ML G+ F ++ E L L+
Sbjct: 190 YRSPRLLLSPNNYT-KAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248
Query: 90 ----------ISRGQFITPDT--------LSSKAKCLIRSLLRRDPSERLSSEDTLHHPW 131
R P +S +A + +L P +RL++E+ L HP+
Sbjct: 249 RQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPY 308
Query: 132 L 132
+
Sbjct: 309 M 309
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
G +Y+SPE L+ YS ++ D+WS+G+ L M VGRYP
Sbjct: 192 GTRSYMSPERLQG-THYSVQS-DIWSMGLSLVEMAVGRYPI 230
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 196 DDEMXGXVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 255 ILRLVGTPGAELLKKISSESARNYIQSL 282
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 197 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 254
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 315 PYLEQYYDPSDEPIAEAP 332
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
G +Y+SPE L+ YS ++ D+WS+G+ L M VGRYP
Sbjct: 227 GTRSYMSPERLQG-THYSVQS-DIWSMGLSLVEMAVGRYPI 265
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGXVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 197 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 254
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 315 PYLEQYYDPSDEPIAEAP 332
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 198 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 255
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 256 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 315
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 316 PYLEQYYDPSDEPIAEAP 333
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R IKL + L D +E R +Y+SPE L+ YS ++ D+WS+G+ L
Sbjct: 144 RGEIKLCDFGVSGQLIDEMANEFVGTR---SYMSPERLQG-THYSVQS-DIWSMGLSLVE 198
Query: 71 MLVGRYP 77
M VGRYP
Sbjct: 199 MAVGRYP 205
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 191 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 248
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 249 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 308
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 309 PYLEQYYDPSDEPIAEAP 326
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 213 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 270
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 271 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 330
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 331 PYLEQYYDPSDEPIAEAP 348
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 195 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 252
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 253 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 313 PYLEQYYDPSDEPIAEAP 330
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 241 ILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 213 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 270
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 271 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 330
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 331 PYLEQYYDPSDEPIAEAP 348
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 193 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 250
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 311 PYLEQYYDPSDEPIAEAP 328
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 198 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 255
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 256 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 315
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 316 PYLEQYYDPSDEPIAEAP 333
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 193 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 250
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 251 DLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 311 PYLEQYYDPSDEPIAEAP 328
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 199 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 256
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 257 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 316
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 317 PYLEQYYDPSDEPIAEAP 334
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 190 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 247
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 248 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 307
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 308 PYLEQYYDPSDEPIAEAP 325
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 197 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 254
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 315 PYLEQYYDPSDEPIAEAP 332
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 193 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 250
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 251 DLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 311 PYLEQYYDPSDEPIAEAP 328
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 197 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 254
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 315 PYLEQYYDPSDEPIAEAP 332
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 197 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 254
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 315 PYLEQYYDPSDEPIAEAP 332
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 193 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 250
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 311 PYLEQYYDPSDEPIAEAP 328
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 197 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 254
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 315 PYLEQYYDPSDEPIAEAP 332
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 245
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 246 ILRLVGTPGAELLKKISSESARNYIQSL 273
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 240 ILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 237 ILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 240 ILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 241 ILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNAMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 237 ILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 247 ILRLVGTPGAELLKKISSESARNYIQSL 274
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 199 DDEMXGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 257
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 258 ILRLVGTPGAELLKKISSESARNYIQSL 285
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 247 ILRLVGTPGAELLKKISSESARNYIQSL 274
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 195 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 253
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 254 ILRLVGTPGAELLKKISSESARNYIQSL 281
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 188 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 247 ILRLVGTPGAELLKKISSESARNYIQSL 274
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 237 ILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 240 ILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 186 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 244
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 245 ILRLVGTPGAELLKKISSESARNYIQSL 272
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 245
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 246 ILRLVGTPGAELLKKISSESARNYIQSL 273
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 8 IVIRDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVI 67
+ + + +L+ L DA + +D DE+ Y +PEI+ + Y+ + D+WS+G I
Sbjct: 156 LAVNEDCELKIL-DAGLARHTD-DEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCI 212
Query: 68 LYTMLVGRYPFNDSEHTSLFLKISR-----GQFITPDTLSSKAKCLIRSL 112
+ +L GR F ++H I R G + S A+ I+SL
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 175 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 233
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 234 ILRLVGTPGAELLKKISSESARNYIQSL 261
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 178 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 237 ILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 199 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 257
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 258 ILRLVGTPGAELLKKISSESARNYIQSL 285
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 195 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 253
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 254 ILRLVGTPGAELLKKISSESARNYIQSL 281
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 196 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 255 ILRLVGTPGAELLKKISSESARNYIQSL 282
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 181 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 240 ILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 196 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 255 ILRLVGTPGAELLKKISSESARNYIQSL 282
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 241 ILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 183 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 242 ILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 48/159 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI----------- 90
Y +PE++ D+WS+GVI+ M+ G F ++H + K+
Sbjct: 191 YRAPEVILGMGYKEN--VDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEF 248
Query: 91 -------------SRGQF-------ITPDTL-----------SSKAKCLIRSLLRRDPSE 119
+R ++ + PD L +S+A+ L+ +L D S+
Sbjct: 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 120 RLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPDIDFD 158
R+S ++ L HP++ D S + +PP + +PD D
Sbjct: 309 RISVDEALQHPYINVWYDPS---EAEAPPPK-IPDKQLD 343
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 48/159 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI----------- 90
Y +PE++ D+WS+GVI+ M+ G F ++H + K+
Sbjct: 191 YRAPEVILGMGYKEN--VDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEF 248
Query: 91 -------------SRGQF-------ITPDTL-----------SSKAKCLIRSLLRRDPSE 119
+R ++ + PD L +S+A+ L+ +L D S+
Sbjct: 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 120 RLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPDIDFD 158
R+S ++ L HP++ D S + +PP + +PD D
Sbjct: 309 RISVDEALQHPYINVWYDPS---EAEAPPPK-IPDKQLD 343
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 173 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 231
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 232 ILRLVGTPGAELLKKISSESARNYIQSL 259
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 30 NDELQDKR-GCPAYVSPEILR----SHARYSGRAADMWSLGVILYTMLVGRYPFNDSE 82
+D+ +D+ GC AY++PE + + Y RA D+WSLG+ L + G++P+ + +
Sbjct: 177 DDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRA-DVWSLGISLVELATGQFPYKNCK 233
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 182 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 241 ILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R IKL + L DS + R +Y+SPE L+ YS ++ D+WS+G+ L
Sbjct: 141 RGEIKLCDFGVSGQLIDSMANSFVGTR---SYMSPERLQG-THYSVQS-DIWSMGLSLVE 195
Query: 71 MLVGRYPF 78
M VGRYP
Sbjct: 196 MAVGRYPI 203
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 195 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 252
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 253 DLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 313 PYLAQYYDPSDEPIAEAP 330
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPD-- 99
Y +PEI+ + Y+ ++ D+WS+G IL ML R P +H L G +P
Sbjct: 195 YRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNR-PIFPGKHYLDQLNHILGILGSPSQE 252
Query: 100 ------------------------------TLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
SKA L+ +L +P +R+ E L H
Sbjct: 253 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 130 PWLRESRDSSPETQTYSP 147
P+L + D S E +P
Sbjct: 313 PYLAQYYDPSDEPIAEAP 330
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 173 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 231
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 232 ILRLVGTPGAELLKKISSESARNYIQSL 259
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 11 RDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYT 70
R IKL + L DS + R +Y+SPE L+ YS ++ D+WS+G+ L
Sbjct: 141 RGEIKLCDFGVSGQLIDSMANSFVGTR---SYMSPERLQG-THYSVQS-DIWSMGLSLVE 195
Query: 71 MLVGRYPF 78
M VGRYP
Sbjct: 196 MAVGRYPI 203
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 174 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 232
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 233 ILRLVGTPGAELLKKISSESARNYIQSL 260
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 31 DELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI 90
DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H I
Sbjct: 184 DEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
Query: 91 SR-----GQFITPDTLSSKAKCLIRSL 112
R G + S A+ I+SL
Sbjct: 243 LRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 172 DDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 31 DELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI 90
DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H I
Sbjct: 184 DEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
Query: 91 SR-----GQFITPDTLSSKAKCLIRSL 112
R G + S A+ I+SL
Sbjct: 243 LRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
G +Y+SPE L+ YS ++ D+WS+G+ L M VGRYP
Sbjct: 165 GTRSYMSPERLQG-THYSVQS-DIWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
G +Y+SPE L+ YS ++ D+WS+G+ L M VGRYP
Sbjct: 165 GTRSYMSPERLQG-THYSVQS-DIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
G +Y+SPE L+ YS ++ D+WS+G+ L M VGRYP
Sbjct: 165 GTRSYMSPERLQG-THYSVQS-DIWSMGLSLVEMAVGRYPI 203
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMAGFVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 31/121 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGR--YPFNDSEHTSLFL----------- 88
Y P+IL YS + DMW +G I Y M GR +P + E F+
Sbjct: 166 YRPPDILLGSTDYSTQI-DMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEET 224
Query: 89 ---KISRGQFITPDT--------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHPW 131
+S +F T + L S L+ LL+ + R+S+ED + HP+
Sbjct: 225 WPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF 284
Query: 132 L 132
Sbjct: 285 F 285
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 31 DELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI 90
DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H I
Sbjct: 184 DEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242
Query: 91 SR-----GQFITPDTLSSKAKCLIRSL 112
R G + S A+ I+SL
Sbjct: 243 LRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 176 DDEMAGFVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 38 GCPAYVSPEILRSHARYS-GRAADMWSLGVILYTMLV-GRYPFNDS--EHTSLFLKISRG 93
G +++PE+L + + D++S G + Y ++ G +PF S ++ L
Sbjct: 188 GTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSL 247
Query: 94 QFITPDTLSSK-AKCLIRSLLRRDPSERLSSEDTLHHPWL 132
+ P+ A+ LI ++ DP +R S++ L HP+
Sbjct: 248 DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPF-NDSEHT 84
S + + + G +++PE++R YS ++ D+++ G++LY ++ G+ P+ N +
Sbjct: 162 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS-DVYAFGIVLYELMTGQLPYSNINNRD 220
Query: 85 SLFLKISRGQFITPDTLSSKAKC------LIRSLLRRDPSER 120
+ + RG ++PD ++ C L+ L++ ER
Sbjct: 221 QIIEMVGRGS-LSPDLSKVRSNCPKRMKRLMAECLKKKRDER 261
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 30 NDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLK 89
+DE+ Y +PEI+ + Y+ + D+WS+G I+ +L GR F ++H
Sbjct: 172 DDEMAGFVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 90 ISR-----GQFITPDTLSSKAKCLIRSL 112
I R G + S A+ I+SL
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPF-NDSEHT 84
S + + + G +++PE++R YS ++ D+++ G++LY ++ G+ P+ N +
Sbjct: 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS-DVYAFGIVLYELMTGQLPYSNINNRD 232
Query: 85 SLFLKISRGQFITPDTLSSKAKC------LIRSLLRRDPSER 120
+ + RG ++PD ++ C L+ L++ ER
Sbjct: 233 QIIEMVGRGS-LSPDLSKVRSNCPKRMKRLMAECLKKKRDER 273
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPF-NDSEHT 84
S + + + G +++PE++R YS ++ D+++ G++LY ++ G+ P+ N +
Sbjct: 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS-DVYAFGIVLYELMTGQLPYSNINNRD 232
Query: 85 SLFLKISRGQFITPDTLSSKAKC------LIRSLLRRDPSER 120
+ + RG ++PD ++ C L+ L++ ER
Sbjct: 233 QIIEMVGRGS-LSPDLSKVRSNCPKRMKRLMAECLKKKRDER 273
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 38 GCPAYVSPEILRSHARYSGRA--ADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISR--- 92
GC Y +PE + G + +D+WSLG+ + + R+P+ DS T F ++ +
Sbjct: 198 GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPY-DSWGTP-FQQLKQVVE 255
Query: 93 --GQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPW--LRESRDS 138
+ D S++ L+++ ER + + HP+ L ES+ +
Sbjct: 256 EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTLHESKGT 305
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSL-FLKISRGQFI 96
G +++PE + + AD +S +ILYT+L G PF++ + + F+ + R + +
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL 247
Query: 97 ---TPDTLSSKAKCLIRSLLRRDPSER 120
P+ + + +I DP +R
Sbjct: 248 RPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSL-FLKISRGQFI 96
G +++PE + + AD +S +ILYT+L G PF++ + + F+ + R + +
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL 247
Query: 97 ---TPDTLSSKAKCLIRSLLRRDPSER 120
P+ + + +I DP +R
Sbjct: 248 RPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSL-FLKISRGQFI 96
G +++PE + + AD +S +ILYT+L G PF++ + + F+ + R + +
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL 247
Query: 97 ---TPDTLSSKAKCLIRSLLRRDPSER 120
P+ + + +I DP +R
Sbjct: 248 RPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 33/130 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFN---------------------- 79
Y +PE++ + Y+ A D+WS+G I M++G F
Sbjct: 197 YRAPELIFGNQHYT-TAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREV 255
Query: 80 ----DSEHTSLFLKISRG----QFITPDTL--SSKAKCLIRSLLRRDPSERLSSEDTLHH 129
+ HT + L S+G + +L + +A L+ +LL+ P ER+ + L H
Sbjct: 256 LRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315
Query: 130 PWLRESRDSS 139
P+ E D +
Sbjct: 316 PYFDELHDPA 325
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 34.3 bits (77), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/112 (19%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFN------------DSEHTS 85
G P +++PE++ Y +A D+WS G+ + G P++ ++ S
Sbjct: 188 GTPCWMAPEVMEQVRGYDFKA-DIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 246
Query: 86 LFLKISRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRD 137
L + + + S + +I L++DP +R ++ + L H + +++++
Sbjct: 247 LETGVQDKEMLKKYGKSFRK--MISLCLQKDPEKRPTAAELLRHKFFQKAKN 296
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 27 DSDNDELQDKRGCPAY-VSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
D + ++D R P + +PE L Y A+D+WS GV L+ +L Y +DS +
Sbjct: 179 DKEXXTVKDDRDSPVFWYAPECLMQSKFYI--ASDVWSFGVTLHELLT--YCDSDSSPMA 234
Query: 86 LFLKI 90
LFLK+
Sbjct: 235 LFLKM 239
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 26 EDSDNDELQDKRGCPAYVSPEIL------RSHARYSGRAADMWSLGVILYTMLVGRYPF 78
E D+++ G Y+ P++ + H + G D+WS+GV Y G PF
Sbjct: 165 ELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 27 DSDNDELQDKRGCPAY-VSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTS 85
D + ++D R P + +PE L Y A+D+WS GV L+ +L Y +DS +
Sbjct: 167 DKEXXTVKDDRDSPVFWYAPECLMQSKFYI--ASDVWSFGVTLHELLT--YCDSDSSPMA 222
Query: 86 LFLKI 90
LFLK+
Sbjct: 223 LFLKM 227
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 31/123 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF----NDSEHTSLF---------- 87
Y +P++L +YS + D+WS+G I M+ G+ F +D + +F
Sbjct: 185 YRAPDVLMGSKKYS-TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPRE 243
Query: 88 ---------LKISRGQFITPDTLSS--KAKC-----LIRSLLRRDPSERLSSEDTLHHPW 131
K Q SS C L+ ++L DP++R+S+ D ++HP+
Sbjct: 244 WPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
Query: 132 LRE 134
++
Sbjct: 304 FKD 306
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 31/123 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF----NDSEHTSLF---------- 87
Y +P++L +YS + D+WS+G I M+ G+ F +D + +F
Sbjct: 185 YRAPDVLMGSKKYS-TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPRE 243
Query: 88 ---------LKISRGQFITPDTLSS--KAKC-----LIRSLLRRDPSERLSSEDTLHHPW 131
K Q SS C L+ ++L DP++R+S+ D ++HP+
Sbjct: 244 WPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
Query: 132 LRE 134
++
Sbjct: 304 FKD 306
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 39/129 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYP-FNDSEHTSLFLKISR-------- 92
+ PE+L + Y + DMWSLG +L +M+ R P F+ ++ ++I++
Sbjct: 203 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELY 261
Query: 93 ------------------GQ--------FITPDT---LSSKAKCLIRSLLRRDPSERLSS 123
GQ FI + +S +A L+ LLR D +RL++
Sbjct: 262 GYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTA 321
Query: 124 EDTLHHPWL 132
++ + HP+
Sbjct: 322 KEAMEHPYF 330
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Query: 4 VLRVIVIRDSIKLETLED-AVVLEDSDNDELQDKRGCPAYVSPEIL------RSHARYSG 56
++RVI D + L D E D+++ G Y+ P++ + H + G
Sbjct: 143 IMRVIG-EDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYG 201
Query: 57 RAADMWSLGVILYTMLVGRYPF 78
D+WS+GV Y G PF
Sbjct: 202 ATVDLWSIGVTFYHAATGSLPF 223
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 33.9 bits (76), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 39/129 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYP-FNDSEHTSLFLKISR-------- 92
+ PE+L + Y + DMWSLG +L +M+ R P F+ ++ ++I++
Sbjct: 198 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELY 256
Query: 93 ------------------GQ--------FITPDT---LSSKAKCLIRSLLRRDPSERLSS 123
GQ FI + +S +A L+ LLR D +RL++
Sbjct: 257 GYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTA 316
Query: 124 EDTLHHPWL 132
++ + HP+
Sbjct: 317 KEAMEHPYF 325
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 48/159 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI----------- 90
Y +PE++ D+WS+G I+ M+ G F ++H + K+
Sbjct: 193 YRAPEVILGMGYKEN--VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF 250
Query: 91 -------------SRGQF-------ITPDTL-----------SSKAKCLIRSLLRRDPSE 119
+R ++ + PD L +S+A+ L+ +L D S+
Sbjct: 251 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 310
Query: 120 RLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPDIDFD 158
R+S ++ L HP++ D S + +PP + +PD D
Sbjct: 311 RISVDEALQHPYINVWYDPS---EAEAPPPK-IPDKQLD 345
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 48/159 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI----------- 90
Y +PE++ D+WS+G I+ M+ G F ++H + K+
Sbjct: 192 YRAPEVILGMGYKEN--VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF 249
Query: 91 -------------SRGQF-------ITPDTL-----------SSKAKCLIRSLLRRDPSE 119
+R ++ + PD L +S+A+ L+ +L D S+
Sbjct: 250 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 309
Query: 120 RLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPDIDFD 158
R+S ++ L HP++ D S + +PP + +PD D
Sbjct: 310 RISVDEALQHPYINVWYDPS---EAEAPPPK-IPDKQLD 344
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 28 SDNDELQDKRGCPAYVSPEILRSHAR--YSGRAADMWSLGVILYTMLVGRYPFND-SEHT 84
S + +++ G +++PE++R +S ++ D++S G++LY ++ G P++ +
Sbjct: 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS-DVYSYGIVLYELMTGELPYSHINNRD 244
Query: 85 SLFLKISRGQFITPDTLSSKAKC------LIRSLLRRDPSER------LSSEDTLHH 129
+ + RG + +PD C L+ +++ ER LSS + L H
Sbjct: 245 QIIFMVGRG-YASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 48/159 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI----------- 90
Y +PE++ D+WS+G I+ M+ G F ++H + K+
Sbjct: 191 YRAPEVILGMGYKEN--VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEF 248
Query: 91 -------------SRGQF-------ITPDTL-----------SSKAKCLIRSLLRRDPSE 119
+R ++ + PD L +S+A+ L+ +L D S+
Sbjct: 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 120 RLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPDIDFD 158
R+S ++ L HP++ D S + +PP + +PD D
Sbjct: 309 RISVDEALQHPYINVWYDPS---EAEAPPPK-IPDKQLD 343
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 48/159 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI----------- 90
Y +PE++ D+WS+G I+ M+ G F ++H + K+
Sbjct: 191 YRAPEVILGMGYKEN--VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF 248
Query: 91 -------------SRGQF-------ITPDTL-----------SSKAKCLIRSLLRRDPSE 119
+R ++ + PD L +S+A+ L+ +L D S+
Sbjct: 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASK 308
Query: 120 RLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPDIDFD 158
R+S ++ L HP++ D S + +PP + +PD D
Sbjct: 309 RISVDEALQHPYINVWYDPS---EAEAPPPK-IPDKQLD 343
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 59 ADMWSLGVILYTMLV-GRYPFNDSEHTSLFLKISRGQFIT-PDTLSSKAKCLIRSLLRRD 116
+D+WS GV+L+ + G+ P+ +T I++G+ + P + ++R +R+
Sbjct: 212 SDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQRE 271
Query: 117 PSERLSSEDT 126
P +R S +D
Sbjct: 272 PQQRHSIKDV 281
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 48/159 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI----------- 90
Y +PE++ D+WS+G I+ M+ G F ++H + K+
Sbjct: 191 YRAPEVILGMGYKEN--VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEF 248
Query: 91 -------------SRGQF-------ITPDTL-----------SSKAKCLIRSLLRRDPSE 119
+R ++ + PD L +S+A+ L+ +L D S+
Sbjct: 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 120 RLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPDIDFD 158
R+S ++ L HP++ D S + +PP + +PD D
Sbjct: 309 RISVDEALQHPYINVWYDPS---EAEAPPPK-IPDKQLD 343
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 33.5 bits (75), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/112 (18%), Positives = 50/112 (44%), Gaps = 17/112 (15%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFIT 97
G P +++PE++ Y +A D+WS G+ + G P++ + + +
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKA-DIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND--- 238
Query: 98 PDTLSSKA-------------KCLIRSLLRRDPSERLSSEDTLHHPWLRESR 136
P +L + + +I L++DP +R ++ + L H + ++++
Sbjct: 239 PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 290
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 48/159 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI----------- 90
Y +PE++ D+WS+G I+ M+ G F ++H + K+
Sbjct: 191 YRAPEVILGMGYKEN--VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEF 248
Query: 91 -------------SRGQF-------ITPDTL-----------SSKAKCLIRSLLRRDPSE 119
+R ++ + PD L +S+A+ L+ +L D S+
Sbjct: 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 120 RLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPDIDFD 158
R+S ++ L HP++ D S + +PP + +PD D
Sbjct: 309 RISVDEALQHPYINVWYDPS---EAEAPPPK-IPDKQLD 343
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 59 ADMWSLGVILYTMLV-GRYPFNDSEHTSLFLKISRGQFIT-PDTLSSKAKCLIRSLLRRD 116
+D+WS GV+L+ + G+ P+ +T I++G+ + P + ++R +R+
Sbjct: 218 SDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQRE 277
Query: 117 PSERLSSEDT 126
P +R S +D
Sbjct: 278 PQQRHSIKDV 287
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 48/159 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI----------- 90
Y +PE++ D+WS+G I+ M+ G F ++H + K+
Sbjct: 191 YRAPEVILGMGYKEN--VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEF 248
Query: 91 -------------SRGQF-------ITPDTL-----------SSKAKCLIRSLLRRDPSE 119
+R ++ + PD L +S+A+ L+ +L D S+
Sbjct: 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 120 RLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPDIDFD 158
R+S ++ L HP++ D S + +PP + +PD D
Sbjct: 309 RISVDEALQHPYINVWYDPS---EAEAPPPK-IPDKQLD 343
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 48/159 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI----------- 90
Y +PE++ D+WS+G I+ M+ G F ++H + K+
Sbjct: 191 YRAPEVILGMGYKEN--VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF 248
Query: 91 -------------SRGQF-------ITPDTL-----------SSKAKCLIRSLLRRDPSE 119
+R ++ + PD L +S+A+ L+ +L D S+
Sbjct: 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 120 RLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPDIDFD 158
R+S ++ L HP++ D S + +PP + +PD D
Sbjct: 309 RISVDEALQHPYINVWYDPS---EAEAPPPK-IPDKQLD 343
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 33.5 bits (75), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQM 151
+S+A+ L+ +L DP++R+S +D L HP++ D + + +PP Q+
Sbjct: 284 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA---EVEAPPPQI 330
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 33.5 bits (75), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQM 151
+S+A+ L+ +L DP++R+S +D L HP++ D + + +PP Q+
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA---EVEAPPPQI 337
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 33.5 bits (75), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 48/159 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI----------- 90
Y +PE++ D+WS+G I+ M+ G F ++H + K+
Sbjct: 191 YRAPEVILGMGYKEN--VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEF 248
Query: 91 -------------SRGQF-------ITPDTL-----------SSKAKCLIRSLLRRDPSE 119
+R ++ + PD L +S+A+ L+ +L D S+
Sbjct: 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 308
Query: 120 RLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPDIDFD 158
R+S ++ L HP++ D S + +PP + +PD D
Sbjct: 309 RISVDEALQHPYINVWYDPS---EAEAPPPK-IPDKQLD 343
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 33.5 bits (75), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 59 ADMWSLGVILYTMLV-GRYPFNDSEHTSLFLKISRGQFIT-PDTLSSKAKCLIRSLLRRD 116
+D+WS GV+L+ + G+ P+ +T I++G+ + P + ++R +R+
Sbjct: 241 SDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQRE 300
Query: 117 PSERLSSEDT 126
P +R S +D
Sbjct: 301 PQQRHSIKDV 310
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 33.5 bits (75), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQM 151
+S+A+ L+ +L DP++R+S +D L HP++ D + + +PP Q+
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA---EVEAPPPQI 337
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 33.5 bits (75), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQM 151
+S+A+ L+ +L DP++R+S +D L HP++ D + + +PP Q+
Sbjct: 284 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA---EVEAPPPQI 330
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 33.5 bits (75), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQM 151
+S+A+ L+ +L DP++R+S +D L HP++ D + + +PP Q+
Sbjct: 285 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA---EVEAPPPQI 331
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 33.5 bits (75), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
G +Y++PE L+ YS ++ D+WS+G+ L + VGRYP
Sbjct: 175 GTRSYMAPERLQG-THYSVQS-DIWSMGLSLVELAVGRYPI 213
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 33.5 bits (75), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQM 151
+S+A+ L+ +L DP++R+S +D L HP++ D + + +PP Q+
Sbjct: 285 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA---EVEAPPPQI 331
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQM 151
+S+A+ L+ +L DP++R+S +D L HP++ D + + +PP Q+
Sbjct: 292 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA---EVEAPPPQI 338
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQM 151
+S+A+ L+ +L DP++R+S +D L HP++ D + + +PP Q+
Sbjct: 292 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA---EVEAPPPQI 338
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQM 151
+S+A+ L+ +L DP++R+S +D L HP++ D + + +PP Q+
Sbjct: 290 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA---EVEAPPPQI 336
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQM 151
+S+A+ L+ +L DP++R+S +D L HP++ D + + +PP Q+
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA---EVEAPPPQI 337
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQM 151
+S+A+ L+ +L DP++R+S +D L HP++ D + + +PP Q+
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA---EVEAPPPQI 337
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQM 151
+S+A+ L+ +L DP++R+S +D L HP++ D + + +PP Q+
Sbjct: 329 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA---EVEAPPPQI 375
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 33.1 bits (74), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSE 82
Y +PE++ ARY G DMWSLG IL +L G YP E
Sbjct: 265 YRAPEVILG-ARY-GMPIDMWSLGCILAELLTG-YPLLPGE 302
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 108 LIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYS 146
++ L DP+ R++ L HPWLR P + S
Sbjct: 388 FLKQCLEWDPAVRMTPGQALRHPWLRRRLPKPPTGEKTS 426
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 33.1 bits (74), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSE 82
Y +PE++ ARY G DMWSLG IL +L G YP E
Sbjct: 265 YRAPEVILG-ARY-GMPIDMWSLGCILAELLTG-YPLLPGE 302
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 108 LIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYS 146
++ L DP+ R++ L HPWLR P + S
Sbjct: 388 FLKQCLEWDPAVRMTPGQALRHPWLRRRLPKPPTGEKTS 426
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 33.1 bits (74), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQM 151
+S+A+ L+ +L DP++R+S +D L HP++ D + + +PP Q+
Sbjct: 329 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA---EVEAPPPQI 375
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 33.1 bits (74), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSE 82
Y +PE++ ARY G DMWSLG IL +L G YP E
Sbjct: 265 YRAPEVILG-ARY-GMPIDMWSLGCILAELLTG-YPLLPGE 302
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 108 LIRSLLRRDPSERLSSEDTLHHPWLR 133
++ L DP+ R++ L HPWLR
Sbjct: 388 FLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 32.7 bits (73), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
Y +PE+L AR G DMW++G IL +L+ R PF
Sbjct: 178 YRAPELLFG-ARMYGVGVDMWAVGCILAELLL-RVPF 212
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 32.7 bits (73), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLF 87
Y +PE+L +Y G+A D+W++G ++ M +G F DS+ L+
Sbjct: 190 YRAPELLVGDVKY-GKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY 235
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 32.7 bits (73), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 32/124 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPDT- 100
Y +P++L +YS D+WS+G I M+ G F ++I R TP++
Sbjct: 166 YRAPDVLMGSKKYS-TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR-ILGTPNSK 223
Query: 101 -----------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHPW 131
L L+ +L+ DP++R++++ L H +
Sbjct: 224 NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
Query: 132 LRES 135
+E+
Sbjct: 284 FKEN 287
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 32.7 bits (73), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 32/124 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPDT- 100
Y +P++L +YS D+WS+G I M+ G F ++I R TP++
Sbjct: 166 YRAPDVLMGSKKYS-TTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFR-ILGTPNSK 223
Query: 101 -----------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHPW 131
L L+ +L+ DP++R++++ L H +
Sbjct: 224 NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
Query: 132 LRES 135
+E+
Sbjct: 284 FKEN 287
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 32.7 bits (73), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 32/124 (25%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPDT- 100
Y +P++L +YS D+WS+G I M+ G F ++I R TP++
Sbjct: 166 YRAPDVLMGSKKYS-TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR-ILGTPNSK 223
Query: 101 -----------------------------LSSKAKCLIRSLLRRDPSERLSSEDTLHHPW 131
L L+ +L+ DP++R++++ L H +
Sbjct: 224 NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283
Query: 132 LRES 135
+E+
Sbjct: 284 FKEN 287
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDS-EHTSLFLKISRGQFI 96
G Y+SPE + H D++SLG+IL+ +L YPF+ E + +F
Sbjct: 192 GTKLYMSPEQI--HGNSYSHKVDIFSLGLILFELL---YPFSTQMERVRTLTDVRNLKF- 245
Query: 97 TPDTLSSKAKC---LIRSLLRRDPSER 120
P + K C +++ +L P ER
Sbjct: 246 -PPLFTQKYPCEYVMVQDMLSPSPMER 271
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 47/186 (25%)
Query: 8 IVIRDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVI 67
IV++ L+ L+ + S N + Y +PE++ D+WS+G I
Sbjct: 155 IVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKEN--VDIWSVGCI 212
Query: 68 LYTMLVGRYPFNDSEHTSLFLKISR------GQFIT------------------------ 97
+ ++ G F ++H + K+ +F+
Sbjct: 213 MGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEEL 272
Query: 98 -PDTL-----------SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTY 145
PD + +S+A+ L+ +L DP +R+S ++ L HP++ D + +
Sbjct: 273 FPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPA---EAE 329
Query: 146 SPPDQM 151
+PP Q+
Sbjct: 330 APPPQI 335
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 30/126 (23%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI-------SRGQ 94
Y +PE++ Y+ + D+WS+G + +++G+ F+ ++I ++ Q
Sbjct: 207 YRAPELMLGATEYT-PSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQ 265
Query: 95 FI----------------------TPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
I P+ S A L+ +LR +P R++ + + HP+
Sbjct: 266 MIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325
Query: 133 RESRDS 138
R+S
Sbjct: 326 DHLRNS 331
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 59 ADMWSLGVILYTMLV-GRYPFNDSEHTSLFLKISRGQFIT-PDTLSSKAKCLIRSLLRRD 116
+D+WS GVIL+ + G+ P+ +T + I++G+ + P + ++ +R+
Sbjct: 216 SDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQRE 275
Query: 117 PSERLSSED 125
P +RL+ ++
Sbjct: 276 PQQRLNIKE 284
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 24/32 (75%)
Query: 101 LSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
L++ + L+++LL+ +P +R+S+E+ L HP+
Sbjct: 255 LNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 65/171 (38%), Gaps = 54/171 (31%)
Query: 13 SIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTML 72
IK+ L +A ++ + +Q + Y SPE+L G AD+WS +++ ++
Sbjct: 176 QIKIADLGNACWYDEHYTNSIQTRE----YRSPEVLLGAP--WGCGADIWSTACLIFELI 229
Query: 73 VGRYPF---------NDSEHTS----------------------------LFLKISRGQF 95
G + F D +H + L IS+ +F
Sbjct: 230 TGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKF 289
Query: 96 I-TPDTLSSKAKC----------LIRSLLRRDPSERLSSEDTLHHPWLRES 135
D L+ K K + +L+ DP +R + ++HPWL+++
Sbjct: 290 WPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 65/171 (38%), Gaps = 54/171 (31%)
Query: 13 SIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTML 72
IK+ L +A ++ + +Q + Y SPE+L G AD+WS +++ ++
Sbjct: 176 QIKIADLGNACWYDEHYTNSIQTRE----YRSPEVLLGAP--WGCGADIWSTACLIFELI 229
Query: 73 VGRYPF---------NDSEHTS----------------------------LFLKISRGQF 95
G + F D +H + L IS+ +F
Sbjct: 230 TGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKF 289
Query: 96 I-TPDTLSSKAKC----------LIRSLLRRDPSERLSSEDTLHHPWLRES 135
D L+ K K + +L+ DP +R + ++HPWL+++
Sbjct: 290 WPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 24/32 (75%)
Query: 101 LSSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
L++ + L+++LL+ +P +R+S+E+ L HP+
Sbjct: 255 LNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
+S+A+ L+ +L DP++R+S +D L HP++
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWL 132
+S+A+ L+ +L DP++R+S +D L HP++
Sbjct: 291 ASQARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 31.2 bits (69), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 59 ADMWSLGVILYTMLV-GRYPFNDSEHTSLFLKISRGQFIT-PDTLSSKAKCLIRSLLRRD 116
+D+WSLGV+L+ + G+ P+ + + I++G+ + P T + L+ +R+
Sbjct: 211 SDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQRE 270
Query: 117 PSERLSSEDTLHHPWLRESRDSSP 140
P R + + H L+ +SP
Sbjct: 271 PHMRKNIKGI--HTLLQNLAKASP 292
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQF-ITPDT 100
++SPE+L+ + + +D++S+G+ + G PF D T + L+ G DT
Sbjct: 185 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 244
Query: 101 LSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPE---TQTYSP 147
+ A+ L S R + LS T P R S SP +T+SP
Sbjct: 245 STIPAEELTMSPSRSVANSGLSDSLTTSTP--RPSNGDSPSHPYHRTFSP 292
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 76/188 (40%), Gaps = 51/188 (27%)
Query: 8 IVIRDSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAA--DMWSLG 65
IV++ L+ L+ + N + Y +PE++ G AA D+WS+G
Sbjct: 157 IVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILG----MGYAANVDIWSVG 212
Query: 66 VILYTMLVGRYPFNDSEHTSLFLKI------------------------SRGQF------ 95
I+ ++ G F ++H + K+ +R ++
Sbjct: 213 CIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFE 272
Query: 96 -ITPDTL-----------SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQ 143
+ PD + +S+A+ L+ +L DP +R+S ++ L HP++ D + +
Sbjct: 273 ELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPA---E 329
Query: 144 TYSPPDQM 151
+PP Q+
Sbjct: 330 AEAPPPQI 337
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQF-ITPDT 100
++SPE+L+ + + +D++S+G+ + G PF D T + L+ G DT
Sbjct: 201 WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260
Query: 101 LSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPE---TQTYSP 147
+ A+ L S R + LS T P R S SP +T+SP
Sbjct: 261 STIPAEELTMSPSRSVANSGLSDSLTTSTP--RPSNGDSPSHPYHRTFSP 308
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 54/143 (37%), Gaps = 54/143 (37%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML----------------------------- 72
Y +PE+L AR+ +A D+W++G I +L
Sbjct: 201 YRAPELLLG-ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 259
Query: 73 VGRYPFNDS--------EHTSLFLKISRGQF-------------ITPDTLSSKAKCLIRS 111
V +P + EH++L R + + PD SKA L++
Sbjct: 260 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPD---SKAFHLLQK 316
Query: 112 LLRRDPSERLSSEDTLHHPWLRE 134
LL DP +R++SE + P+ E
Sbjct: 317 LLTMDPIKRITSEQAMQDPYFLE 339
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPDIDFD 158
+S+A+ L+ +L D S+R+S ++ L HP++ D S + +PP + +PD D
Sbjct: 285 ASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPS---EAEAPPPK-IPDKQLD 337
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPDIDFD 158
+S+A+ L+ +L D S+R+S ++ L HP++ D S + +PP + +PD D
Sbjct: 296 ASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPS---EAEAPPPK-IPDKQLD 348
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPDIDFD 158
+S+A+ L+ +L D S+R+S ++ L HP++ D S + +PP + +PD D
Sbjct: 291 ASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPS---EAEAPPPK-IPDKQLD 343
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPETQTYSPPDQMVPDIDFD 158
+S+A+ L+ +L D S+R+S ++ L HP++ D S + +PP + +PD D
Sbjct: 291 ASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPS---EAEAPPPK-IPDKQLD 343
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 34/137 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFI-TPDT 100
Y +PEI+ + Y+ + D+WS+G I+ +L G+ F S++ +I +P+
Sbjct: 194 YRAPEIMLNWMHYN-QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV 252
Query: 101 L----SSKAKCLIRSL--------------------------LRRDPSERLSSEDTLHHP 130
L S A+ I+SL L D +R+S+ + L H
Sbjct: 253 LAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHA 312
Query: 131 WLRESRD--SSPETQTY 145
+ + D PE + Y
Sbjct: 313 YFSQYHDPEDEPEAEPY 329
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 34/137 (24%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFI-TPDT 100
Y +PEI+ + Y+ + D+WS+G I+ +L G+ F S++ +I +P+
Sbjct: 194 YRAPEIMLNWMHYN-QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEV 252
Query: 101 L----SSKAKCLIRSL--------------------------LRRDPSERLSSEDTLHHP 130
L S A+ I+SL L D +R+S+ + L H
Sbjct: 253 LAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHA 312
Query: 131 WLRESRD--SSPETQTY 145
+ + D PE + Y
Sbjct: 313 YFSQYHDPEDEPEAEPY 329
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI 90
Y +PEI+ + Y+ + D+WS+G I+ +L G+ F S++ +I
Sbjct: 186 YRAPEIMLNWMHYN-QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 233
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 49/122 (40%), Gaps = 33/122 (27%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF-NDSEHTSLFLKISR-------- 92
Y PEIL YS + D+WS+ I ML+ F DSE LF KI
Sbjct: 203 YRPPEILLGSRHYS-TSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF-KIFEVLGLPDDT 260
Query: 93 ---GQFITPDTLSS----KAKCLIR---------------SLLRRDPSERLSSEDTLHHP 130
G PD S + K L R ++L DP +R+S+++ L HP
Sbjct: 261 TWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHP 320
Query: 131 WL 132
+
Sbjct: 321 YF 322
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 26/43 (60%)
Query: 100 TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPET 142
++S L+ S+L+ +P++R++ + L HP+L++ R E
Sbjct: 333 SISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLEN 375
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 30.4 bits (67), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 41/108 (37%), Gaps = 17/108 (15%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPDTL 101
Y SPE+L A DMWSLG IL M G F+ + KI I P +
Sbjct: 205 YRSPEVLLGMP--YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHI 262
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPW-LRESRDSSPETQTYSPP 148
+A P R E W L++++D E Y PP
Sbjct: 263 LDQA-----------PKARKFFEKLPDGTWNLKKTKDGKRE---YKPP 296
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 41/108 (37%), Gaps = 17/108 (15%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPDTL 101
Y SPE+L A DMWSLG IL M G F+ + KI I P +
Sbjct: 224 YRSPEVLLGMP--YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHI 281
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPW-LRESRDSSPETQTYSPP 148
+A P R E W L++++D E Y PP
Sbjct: 282 LDQA-----------PKARKFFEKLPDGTWNLKKTKDGKRE---YKPP 315
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 41/108 (37%), Gaps = 17/108 (15%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQFITPDTL 101
Y SPE+L A DMWSLG IL M G F+ + KI I P +
Sbjct: 224 YRSPEVLLGMP--YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHI 281
Query: 102 SSKAKCLIRSLLRRDPSERLSSEDTLHHPW-LRESRDSSPETQTYSPP 148
+A P R E W L++++D E Y PP
Sbjct: 282 LDQA-----------PKARKFFEKLPDGTWNLKKTKDGKRE---YKPP 315
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 41/134 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF--NDSEHTSLFLKISRG------ 93
+ PE+L Y + DMWSLG + M+ + PF H L +KI++
Sbjct: 191 FKGPELLVDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL-VKIAKVLGTDGL 248
Query: 94 ----------------------------QFITPDT---LSSKAKCLIRSLLRRDPSERLS 122
+F+ D +S +A + LLR D ERL+
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 123 SEDTLHHPWLRESR 136
+ + + HP+ ++ R
Sbjct: 309 ALEAMTHPYFQQVR 322
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 41/134 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF--NDSEHTSLFLKISRG------ 93
+ PE+L Y + DMWSLG + M+ + PF H L +KI++
Sbjct: 191 FKGPELLVDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL-VKIAKVLGTDGL 248
Query: 94 ----------------------------QFITPDT---LSSKAKCLIRSLLRRDPSERLS 122
+F+ D +S +A + LLR D ERL+
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 123 SEDTLHHPWLRESR 136
+ + + HP+ ++ R
Sbjct: 309 ALEAMTHPYFQQVR 322
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLV 73
+ +PE L+ + Y A+D+WS GV LY +L
Sbjct: 186 WYAPECLKEYKFYY--ASDVWSFGVTLYELLT 215
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLV 73
+ +PE L+ + Y A+D+WS GV LY +L
Sbjct: 186 WYAPECLKEYKFYY--ASDVWSFGVTLYELLT 215
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 30.0 bits (66), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 41/134 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF--NDSEHTSLFLKISRG------ 93
+ PE+L Y + DMWSLG + M+ + PF H L +KI++
Sbjct: 191 FKGPELLVDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL-VKIAKVLGTDGL 248
Query: 94 ----------------------------QFITPDT---LSSKAKCLIRSLLRRDPSERLS 122
+F+ D +S +A + LLR D ERL+
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 123 SEDTLHHPWLRESR 136
+ + + HP+ ++ R
Sbjct: 309 ALEAMTHPYFQQVR 322
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 41/134 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF--NDSEHTSLFLKISRG------ 93
+ PE+L Y + DMWSLG + M+ + PF H L +KI++
Sbjct: 191 FKGPELLVDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL-VKIAKVLGTDGL 248
Query: 94 ----------------------------QFITPDT---LSSKAKCLIRSLLRRDPSERLS 122
+F+ D +S +A + LLR D ERL+
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 123 SEDTLHHPWLRESR 136
+ + + HP+ ++ R
Sbjct: 309 ALEAMTHPYFQQVR 322
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 41/134 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF--NDSEHTSLFLKISRG------ 93
+ PE+L Y + DMWSLG + M+ + PF H L +KI++
Sbjct: 191 FKGPELLVDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL-VKIAKVLGTDGL 248
Query: 94 ----------------------------QFITPDT---LSSKAKCLIRSLLRRDPSERLS 122
+F+ D +S +A + LLR D ERL+
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 123 SEDTLHHPWLRESR 136
+ + + HP+ ++ R
Sbjct: 309 ALEAMTHPYFQQVR 322
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 30.0 bits (66), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 41/134 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF--NDSEHTSLFLKISRG------ 93
+ PE+L Y + DMWSLG + M+ + PF H L +KI++
Sbjct: 193 FKGPELLVDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL-VKIAKVLGTDGL 250
Query: 94 ----------------------------QFITPDT---LSSKAKCLIRSLLRRDPSERLS 122
+F+ D +S +A + LLR D ERL+
Sbjct: 251 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 310
Query: 123 SEDTLHHPWLRESR 136
+ + + HP+ ++ R
Sbjct: 311 ALEAMTHPYFQQVR 324
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML 72
+ +PE L+ + Y A+D+WS GV LY +L
Sbjct: 203 WYAPECLKEYKFYY--ASDVWSFGVTLYELL 231
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 41/134 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF--NDSEHTSLFLKISRG------ 93
+ PE+L Y + DMWSLG + M+ + PF H L +KI++
Sbjct: 191 FKGPELLVDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL-VKIAKVLGTDGL 248
Query: 94 ----------------------------QFITPDT---LSSKAKCLIRSLLRRDPSERLS 122
+F+ D +S +A + LLR D ERL+
Sbjct: 249 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 308
Query: 123 SEDTLHHPWLRESR 136
+ + + HP+ ++ R
Sbjct: 309 ALEAMTHPYFQQVR 322
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 41/134 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF--NDSEHTSLFLKISRG------ 93
+ PE+L Y + DMWSLG + M+ + PF H L +KI++
Sbjct: 192 FKGPELLVDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL-VKIAKVLGTDGL 249
Query: 94 ----------------------------QFITPDT---LSSKAKCLIRSLLRRDPSERLS 122
+F+ D +S +A + LLR D ERL+
Sbjct: 250 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 309
Query: 123 SEDTLHHPWLRESR 136
+ + + HP+ ++ R
Sbjct: 310 ALEAMTHPYFQQVR 323
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 41/134 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF--NDSEHTSLFLKISRG------ 93
+ PE+L Y + DMWSLG + M+ + PF H L +KI++
Sbjct: 192 FKGPELLVDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL-VKIAKVLGTDGL 249
Query: 94 ----------------------------QFITPDT---LSSKAKCLIRSLLRRDPSERLS 122
+F+ D +S +A + LLR D ERL+
Sbjct: 250 NVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 309
Query: 123 SEDTLHHPWLRESR 136
+ + + HP+ ++ R
Sbjct: 310 ALEAMTHPYFQQVR 323
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 41/134 (30%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF--NDSEHTSLFLKISRG------ 93
+ PE+L Y + DMWSLG + M+ + PF H L +KI++
Sbjct: 212 FKGPELLVDLQDYD-YSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQL-VKIAKVLGTDGL 269
Query: 94 ----------------------------QFITPDT---LSSKAKCLIRSLLRRDPSERLS 122
+F+ D +S +A + LLR D ERL+
Sbjct: 270 NAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLT 329
Query: 123 SEDTLHHPWLRESR 136
+ + + HP+ ++ R
Sbjct: 330 ALEAMTHPYFQQVR 343
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L+ + ++DMWS GV+L+ + + P+ + + + G ++ PD
Sbjct: 198 WMAPESLKDGVFTT--SSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+ L+R + +P+ R
Sbjct: 256 NCPERVTDLMRMCWQFNPNMR 276
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
+ PE+L + Y + DMWSLG +L +M+ + PF
Sbjct: 197 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRKEPF 232
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 29.6 bits (65), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
+ PE+L + Y + DMWSLG +L +M+ + PF
Sbjct: 197 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRKEPF 232
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
+ PE+L + Y + DMWSLG +L +M+ + PF
Sbjct: 197 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRKEPF 232
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
+ PE+L + Y + DMWSLG +L +M+ + PF
Sbjct: 196 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRKEPF 231
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
+ PE+L + Y + DMWSLG +L +M+ + PF
Sbjct: 197 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRKEPF 232
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
+ PE+L + Y + DMWSLG +L +M+ + PF
Sbjct: 197 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
+ PE+L + Y + DMWSLG +L +M+ + PF
Sbjct: 195 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRKEPF 230
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
+ PE+L + Y + DMWSLG +L +M+ + PF
Sbjct: 196 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRKEPF 231
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
+ PE+L + Y + DMWSLG +L +M+ + PF
Sbjct: 197 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRKEPF 232
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
+ PE+L + Y + DMWSLG +L +M+ + PF
Sbjct: 202 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRKEPF 237
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L+ + ++DMWS GV+L+ + + P+ + + + G ++ PD
Sbjct: 199 WMAPESLKDGVFTT--SSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 256
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+ L+R + +P+ R
Sbjct: 257 NCPERVTDLMRMCWQFNPNMR 277
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
+ PE+L + Y + DMWSLG +L +M+ + PF
Sbjct: 197 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRKEPF 232
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
+ PE+L + Y + DMWSLG +L +M+ + PF
Sbjct: 197 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRKEPF 232
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
+ PE+L + Y + DMWSLG +L +M+ + PF
Sbjct: 197 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 29.3 bits (64), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
+ PE+L + Y + DMWSLG +L +M+ + PF
Sbjct: 197 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRKEPF 232
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPF 78
+ PE+L + Y + DMWSLG +L +M+ + PF
Sbjct: 197 FKGPELLVDYQMYD-YSLDMWSLGCMLASMIFRKEPF 232
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L+ + ++DMWS GV+L+ + + P+ + + + G ++ PD
Sbjct: 198 WMAPESLKDGVFTT--SSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+ L+R + +P+ R
Sbjct: 256 NCPERVTDLMRMCWQFNPNMR 276
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 25/130 (19%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRG---- 93
G +++PE++ R D+WS ++ ML G +P+ L LKI+
Sbjct: 234 GTETHMAPEVVL--GRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPV 291
Query: 94 QFITPDTLSSKAKCLIRSLLRRDPSERLSSED-------------TLHHPWLRESRDSSP 140
+ I P A+ I+ LR++P R+S+ + L PW E ++
Sbjct: 292 REIPPSCAPLTAQA-IQEGLRKEPIHRVSAAELGGKVNRALQQVGGLKSPWRGEYKEPR- 349
Query: 141 ETQTYSPPDQ 150
+ PP+Q
Sbjct: 350 ----HPPPNQ 355
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 29.3 bits (64), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L+ + ++DMWS GV+L+ + + P+ + + + G ++ PD
Sbjct: 195 WMAPESLKDGVFTT--SSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 252
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+ L+R + +P R
Sbjct: 253 NCPERVTDLMRMCWQFNPKMR 273
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L+ + ++DMWS GV+L+ + + P+ + + + G ++ PD
Sbjct: 198 WMAPESLKDGVFTT--SSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+ L+R + +P R
Sbjct: 256 NCPERVTDLMRMCWQFNPKMR 276
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 59 ADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRG-QFITPDTLSSKAKCLIRSLLRRD 116
+D+WS GV+L+ ++ +G P+ L+ K+ +G + P + L+R R
Sbjct: 212 SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREK 271
Query: 117 PSERLSSEDTL 127
P ER S L
Sbjct: 272 PYERPSFAQIL 282
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 59 ADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRG-QFITPDTLSSKAKCLIRSLLRRD 116
+D+WS GV+L+ ++ +G P+ L+ K+ +G + P + L+R R
Sbjct: 222 SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREK 281
Query: 117 PSERLSSEDTL 127
P ER S L
Sbjct: 282 PYERPSFAQIL 292
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L+ + ++DMWS GV+L+ + + P+ + + + G ++ PD
Sbjct: 198 WMAPESLKDGVFTT--SSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+ L+R + +P R
Sbjct: 256 NCPERVTDLMRMCWQFNPKMR 276
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L R +D+WS GV+L+ + +G P+ LF + G + P
Sbjct: 218 WMAPEAL--FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 275
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+++ ++R PS+R
Sbjct: 276 NCTNELYMMMRDCWHAVPSQR 296
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L R +D+WS GV+L+ + +G P+ LF + G + P
Sbjct: 218 WMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 275
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+++ ++R PS+R
Sbjct: 276 NCTNELYMMMRDCWHAVPSQR 296
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 59 ADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRG-QFITPDTLSSKAKCLIRSLLRRD 116
+D+WS GV+L+ ++ +G P+ L+ K+ +G + P + L+R R
Sbjct: 219 SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREK 278
Query: 117 PSERLSSEDTL 127
P ER S L
Sbjct: 279 PYERPSFAQIL 289
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L R +D+WS GV+L+ + +G P+ LF + G + P
Sbjct: 203 WMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 260
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+++ ++R PS+R
Sbjct: 261 NCTNELYMMMRDCWHAVPSQR 281
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 26/43 (60%)
Query: 100 TLSSKAKCLIRSLLRRDPSERLSSEDTLHHPWLRESRDSSPET 142
++S + L+ S+LR + +R++ + L HP+L++ R + E
Sbjct: 338 SISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKENLEN 380
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L+ + ++DMWS GV+L+ + + P+ + + + G ++ PD
Sbjct: 198 WMAPESLKDGVFTT--SSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 255
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+ L+R + +P R
Sbjct: 256 NCPERVTDLMRMCWQFNPKMR 276
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L R +D+WS GV+L+ + +G P+ LF + G + P
Sbjct: 207 WMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 264
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+++ ++R PS+R
Sbjct: 265 NCTNELYMMMRDCWHAVPSQR 285
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQ 94
+ +PE L+ Y A+D+WS GV LY +L N S HT I Q
Sbjct: 181 WYAPECLKECKFYY--ASDVWSFGVTLYELLT-YCDSNQSPHTKFTELIGHTQ 230
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L R +D+WS GV+L+ + +G P+ LF + G + P
Sbjct: 218 WMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 275
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+++ ++R PS+R
Sbjct: 276 NCTNELYMMMRDCWHAVPSQR 296
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L R +D+WS GV+L+ + +G P+ LF + G + P
Sbjct: 211 WMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 268
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+++ ++R PS+R
Sbjct: 269 NCTNELYMMMRDCWHAVPSQR 289
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L R +D+WS GV+L+ + +G P+ LF + G + P
Sbjct: 210 WMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 267
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+++ ++R PS+R
Sbjct: 268 NCTNELYMMMRDCWHAVPSQR 288
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRGQ 94
+ +PE L+ Y A+D+WS GV LY +L N S HT I Q
Sbjct: 180 WYAPECLKECKFYY--ASDVWSFGVTLYELLT-YCDSNQSPHTKFTELIGHTQ 229
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L R +D+WS GV+L+ + +G P+ LF + G + P
Sbjct: 218 WMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 275
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+++ ++R PS+R
Sbjct: 276 NCTNELYMMMRDCWHAVPSQR 296
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 32 ELQDKRGCPAYVSPEIL-RSHARYSGRAADMWSLGVILYTMLVGRYPFNDSE 82
+L + G Y +PE SHA Y AD+++L +LY L G P+ +
Sbjct: 191 QLGNTVGTLYYXAPERFSESHATYR---ADIYALTCVLYECLTGSPPYQGDQ 239
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKISRG---- 93
G +++PE++ R D+WS ++ ML G +P+ L LKI+
Sbjct: 253 GTETHMAPEVVL--GRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPV 310
Query: 94 QFITPDTLSSKAKCLIRSLLRRDPSERLSSED 125
+ I P A+ I+ LR++P R+S+ +
Sbjct: 311 REIPPSCAPLTAQA-IQEGLRKEPIHRVSAAE 341
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L+ + ++DMWS GV+L+ + + P+ + + + G ++ PD
Sbjct: 197 WMAPESLKDGVFTT--SSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPD 254
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+ L+R + +P R
Sbjct: 255 NCPERVTDLMRMCWQFNPKMR 275
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 11/96 (11%)
Query: 38 GCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDS-EHTSLFLKISRGQFI 96
G Y+SPE + H D++SLG+IL+ +L Y F+ E + + +F
Sbjct: 238 GTKLYMSPEQI--HGNNYSHKVDIFSLGLILFELL---YSFSTQMERVRIITDVRNLKF- 291
Query: 97 TPDTLSSK---AKCLIRSLLRRDPSERLSSEDTLHH 129
P + K +++ +L P+ER + D + +
Sbjct: 292 -PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFI-TPD 99
+++PE L R +D+WS GV+L+ + +G P+ LF + G + P
Sbjct: 259 WMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS 316
Query: 100 TLSSKAKCLIRSLLRRDPSER 120
+++ ++R PS+R
Sbjct: 317 NCTNELYMMMRDCWHAVPSQR 337
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 22 AVVLEDSDNDELQDKRGCPAYVSPEILRSHARYSGRAADMWSLGVILYTMLV-GRYPFND 80
A V+ED++ + + + +PE + + ++ ++ D+WS G++LY ++ G+ P+
Sbjct: 157 ARVIEDNEYTAREGAKFPIKWTAPEAI-NFGCFTIKS-DVWSFGILLYEIVTYGKIPYPG 214
Query: 81 SEHTSLFLKISRG 93
+ + +S+G
Sbjct: 215 RTNADVMTALSQG 227
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 51/142 (35%), Gaps = 29/142 (20%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI----------- 90
Y +PE+L + + D+WS+G I M + F S KI
Sbjct: 185 YRAPEVLLQSSYAT--PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242
Query: 91 -SRGQFITPDTLSSK---------------AKCLIRSLLRRDPSERLSSEDTLHHPWLRE 134
R + SK K L+ L +P++R+S+ L HP+ ++
Sbjct: 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
Query: 135 SRDSSPETQTYSPPDQMVPDID 156
++ PP Q +++
Sbjct: 303 LERCKENLDSHLPPSQNTSELN 324
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 22 AVVLEDSDNDELQDKRGCPAYVSPEILRSHARYS-------GRAADMWSLGVILYTMLVG 74
V+ D+L+ + G +++PEI+R + + + +D+++LG I Y +
Sbjct: 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR 239
Query: 75 RYPFNDSEHTSLFLKISRG 93
+PF ++ ++ G
Sbjct: 240 EWPFKTQPAEAIIWQMGTG 258
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 33/123 (26%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI----------- 90
Y +PE++ ++ + DMWS G ++ M + F S + KI
Sbjct: 199 YRAPELVMQFKGFT-KLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIED 257
Query: 91 ---------------------SRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
+R T A LI +L +P R+S+E L H
Sbjct: 258 VVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317
Query: 130 PWL 132
P+
Sbjct: 318 PYF 320
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 33/123 (26%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGRYPFNDSEHTSLFLKI----------- 90
Y +PE++ ++ + DMWS G ++ M + F S + KI
Sbjct: 199 YRAPELVMQFKGFT-KLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIED 257
Query: 91 ---------------------SRGQFITPDTLSSKAKCLIRSLLRRDPSERLSSEDTLHH 129
+R T A LI +L +P R+S+E L H
Sbjct: 258 VVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317
Query: 130 PWL 132
P+
Sbjct: 318 PYF 320
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILY-TMLVGRYPFNDSEHTSLFLKISRGQFITP 98
+ +PE + ++ +++ A+D+WS G++++ M G P+ D + + I G + P
Sbjct: 200 WTAPEAI-AYRKFTS-ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPP 255
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 27.3 bits (59), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 58 AADMWSLGVILYTMLVGRYPFNDSEH 83
++DMWS G +L + G F EH
Sbjct: 239 SSDMWSFGCVLAELYTGSLLFRTHEH 264
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 27.3 bits (59), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILY-TMLVGRYPFNDSEHTSLFLKISRGQFITP 98
+ +PE + ++ +++ A+D+WS G++++ M G P+ D + + I G + P
Sbjct: 185 WTAPEAI-AYRKFTS-ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPP 240
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILY-TMLVGRYPFNDSEHTSLFLKISRGQFITP 98
+ +PE + ++ +++ A+D+WS G++++ M G P+ D + + I G + P
Sbjct: 179 WTAPEAI-AYRKFTS-ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPP 234
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 6 RVIVIRDSI--KLETLEDAVVLEDSDNDELQDKRGCPA---YVSPEILRSHARYSGRAAD 60
R I+I ++ K+ A VLED D + RG + SPE + ++ +++ A+D
Sbjct: 176 RNILINSNLVCKVSDFGLARVLED-DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTS-ASD 232
Query: 61 MWSLGVILY-TMLVGRYPFNDSEHTSLFLKISRGQFITP 98
+WS G++L+ M G P+ + + + + G + P
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP 271
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 26.9 bits (58), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 59 ADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFIT-PDTLSSKAKCLIRSLLRRD 116
+D+WS GV+L+ ++ +G P+ LF + G + PD S + L+ +++
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQE 292
Query: 117 PSER 120
P +R
Sbjct: 293 PDKR 296
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 59 ADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFIT-PDTLSSKAKCLIRSLLRRD 116
+D+WS GV+L+ ++ +G P+ LF + G + PD S + L+ +++
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQE 292
Query: 117 PSER 120
P +R
Sbjct: 293 PDKR 296
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 26.9 bits (58), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 59 ADMWSLGVILYTML-VGRYPFNDSEHTSLFLKISRGQFIT-PDTLSSKAKCLIRSLLRRD 116
+D+WS GV+L+ ++ +G P+ LF + G + PD S + L+ +++
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQE 292
Query: 117 PSER 120
P +R
Sbjct: 293 PDKR 296
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 26.9 bits (58), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 46/135 (34%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGR--YPFNDS-EHTSLFLKI-------- 90
Y +PE++ A + D+WS+G IL +G +P +DS EH ++ +I
Sbjct: 200 YRAPEVIL--ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHM 257
Query: 91 ---------------------SRGQFIT------------PDTLSSKAKCLIRSLLRRDP 117
S G++++ D + LI+ +L DP
Sbjct: 258 IQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317
Query: 118 SERLSSEDTLHHPWL 132
++R++ + L HP+
Sbjct: 318 AKRITLREALKHPFF 332
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 46/135 (34%)
Query: 42 YVSPEILRSHARYSGRAADMWSLGVILYTMLVGR--YPFNDS-EHTSLFLKI-------- 90
Y +PE++ A + D+WS+G IL +G +P +DS EH ++ +I
Sbjct: 200 YRAPEVIL--ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHM 257
Query: 91 ---------------------SRGQFIT------------PDTLSSKAKCLIRSLLRRDP 117
S G++++ D + LI+ +L DP
Sbjct: 258 IQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317
Query: 118 SERLSSEDTLHHPWL 132
++R++ + L HP+
Sbjct: 318 AKRITLREALKHPFF 332
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 26.9 bits (58), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 23 VVLEDSDNDELQDKRGCPAY-VSPEILRSHARYSGRAADMWSLGVILYTML 72
V+ +D + ++++ P + +PE L + +++S A+D+WS GV+LY +
Sbjct: 166 VLPQDKEXXKVKEPGESPIFWYAPESL-TESKFS-VASDVWSFGVVLYELF 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 23 VVLEDSDNDELQDKRGCPAY-VSPEILRSHARYSGRAADMWSLGVILYTMLV 73
V+ +D + ++++ P + +PE L + +++S A+D+WS GV+LY +
Sbjct: 194 VLPQDKEXXKVKEPGESPIFWYAPESL-TESKFS-VASDVWSFGVVLYELFT 243
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 23 VVLEDSDNDELQDKRGCPAY-VSPEILRSHARYSGRAADMWSLGVILYTML 72
V+ +D + ++++ P + +PE L + +++S A+D+WS GV+LY +
Sbjct: 167 VLPQDKEXXKVKEPGESPIFWYAPESL-TESKFS-VASDVWSFGVVLYELF 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 23 VVLEDSDNDELQDKRGCPAY-VSPEILRSHARYSGRAADMWSLGVILYTMLV 73
V+ +D + ++++ P + +PE L + +++S A+D+WS GV+LY +
Sbjct: 168 VLPQDKEXXKVKEPGESPIFWYAPESL-TESKFS-VASDVWSFGVVLYELFT 217
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 23 VVLEDSDNDELQDKRGCPAY-VSPEILRSHARYSGRAADMWSLGVILYTML 72
V+ +D + ++++ P + +PE L + +++S A+D+WS GV+LY +
Sbjct: 162 VLPQDKEXXKVKEPGESPIFWYAPESL-TESKFS-VASDVWSFGVVLYELF 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 23 VVLEDSDNDELQDKRGCPAY-VSPEILRSHARYSGRAADMWSLGVILYTMLV 73
V+ +D + ++++ P + +PE L + +++S A+D+WS GV+LY +
Sbjct: 170 VLPQDKEXXKVKEPGESPIFWYAPESL-TESKFS-VASDVWSFGVVLYELFT 219
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 23 VVLEDSDNDELQDKRGCPAY-VSPEILRSHARYSGRAADMWSLGVILYTML 72
V+ +D + ++++ P + +PE L + +++S A+D+WS GV+LY +
Sbjct: 163 VLPQDKEXXKVKEPGESPIFWYAPESL-TESKFS-VASDVWSFGVVLYELF 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 23 VVLEDSDNDELQDKRGCPAY-VSPEILRSHARYSGRAADMWSLGVILYTML 72
V+ +D + ++++ P + +PE L + +++S A+D+WS GV+LY +
Sbjct: 163 VLPQDKEXXKVKEPGESPIFWYAPESL-TESKFS-VASDVWSFGVVLYELF 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 23 VVLEDSDNDELQDKRGCPAY-VSPEILRSHARYSGRAADMWSLGVILYTML 72
V+ +D + ++++ P + +PE L + +++S A+D+WS GV+LY +
Sbjct: 161 VLPQDKEXXKVKEPGESPIFWYAPESL-TESKFS-VASDVWSFGVVLYELF 209
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 23 VVLEDSDNDELQDKRGCPAY-VSPEILRSHARYSGRAADMWSLGVILYTMLV 73
V+ +D + ++++ P + +PE L + +++S A+D+WS GV+LY +
Sbjct: 166 VLPQDKEXXKVKEPGESPIFWYAPESL-TESKFS-VASDVWSFGVVLYELFT 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 23 VVLEDSDNDELQDKRGCPAY-VSPEILRSHARYSGRAADMWSLGVILYTML 72
V+ +D + ++++ P + +PE L + +++S A+D+WS GV+LY +
Sbjct: 169 VLPQDKEXXKVKEPGESPIFWYAPESL-TESKFS-VASDVWSFGVVLYELF 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 23 VVLEDSDNDELQDKRGCPAY-VSPEILRSHARYSGRAADMWSLGVILYTML 72
V+ +D + ++++ P + +PE L + +++S A+D+WS GV+LY +
Sbjct: 181 VLPQDKEXXKVKEPGESPIFWYAPESL-TESKFS-VASDVWSFGVVLYELF 229
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 26.6 bits (57), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 23 VVLEDSDNDELQDKRGCPAY-VSPEILRSHARYSGRAADMWSLGVILYTML 72
V+ +D + ++++ P + +PE L + +++S A+D+WS GV+LY +
Sbjct: 166 VLPQDKEXXKVKEPGESPIFWYAPESL-TESKFS-VASDVWSFGVVLYELF 214
>pdb|2EDN|A Chain A, Solution Structure Of The First Ig-Like Domain From Human
Myosin-Binding Protein C, Fast-Type
Length = 118
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 12 DSIKLETLEDAVVLEDSDNDELQDKRGCPAYVSPEI---LRSHARYSGRAADMWSLGVIL 68
DS+ +ET +DAVV+ + EL DK + + +S AR+S + + + V
Sbjct: 20 DSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYT 79
Query: 69 YTMLVGRYPFNDSEHTSLFLK 89
+ +G+ D + L +K
Sbjct: 80 VELHIGKVVLGDRGYYRLEVK 100
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 26.6 bits (57), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 23 VVLEDSDNDELQDKRGCPAY-VSPEILRSHARYSGRAADMWSLGVILYTML 72
V+ +D + ++++ P + +PE L + +++S A+D+WS GV+LY +
Sbjct: 181 VLPQDKEXXKVKEPGESPIFWYAPESL-TESKFS-VASDVWSFGVVLYELF 229
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 24 VLEDSDNDELQDKRGCPA---YVSPEILRSHARYSGRAADMWSLGVILY-TMLVGRYPFN 79
VLED D + RG + SPE + ++ +++ A+D+WS G++L+ M G P+
Sbjct: 167 VLED-DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTS-ASDVWSYGIVLWEVMSYGERPYW 223
Query: 80 DSEHTSLFLKISRGQFITP 98
+ + + + G + P
Sbjct: 224 EMSNQDVIKAVDEGYRLPP 242
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 26.6 bits (57), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 24 VLEDSDNDELQDKRGCPA---YVSPEILRSHARYSGRAADMWSLGVILY-TMLVGRYPFN 79
VLED D + RG + SPE + ++ +++ A+D+WS G++L+ M G P+
Sbjct: 167 VLED-DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTS-ASDVWSYGIVLWEVMSYGERPYW 223
Query: 80 DSEHTSLFLKISRGQFITP 98
+ + + + G + P
Sbjct: 224 EMSNQDVIKAVDEGYRLPP 242
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 26.6 bits (57), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 24 VLEDSDNDELQDKRGCPA---YVSPEILRSHARYSGRAADMWSLGVILY-TMLVGRYPFN 79
VLED D + RG + SPE + ++ +++ A+D+WS G++L+ M G P+
Sbjct: 196 VLED-DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTS-ASDVWSYGIVLWEVMSYGERPYW 252
Query: 80 DSEHTSLFLKISRGQFITP 98
+ + + + G + P
Sbjct: 253 EMSNQDVIKAVDEGYRLPP 271
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 24 VLEDSDNDELQDKRGCPA---YVSPEILRSHARYSGRAADMWSLGVILY-TMLVGRYPFN 79
VLED D + RG + SPE + ++ +++ A+D+WS G++L+ M G P+
Sbjct: 194 VLED-DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTS-ASDVWSYGIVLWEVMSYGERPYW 250
Query: 80 DSEHTSLFLKISRGQFITP 98
+ + + + G + P
Sbjct: 251 EMSNQDVIKAVDEGYRLPP 269
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 24 VLEDSDNDELQDKRGCPA---YVSPEILRSHARYSGRAADMWSLGVILY-TMLVGRYPFN 79
VLED D + RG + SPE + ++ +++ A+D+WS G++L+ M G P+
Sbjct: 196 VLED-DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTS-ASDVWSYGIVLWEVMSYGERPYW 252
Query: 80 DSEHTSLFLKISRGQFITP 98
+ + + + G + P
Sbjct: 253 EMSNQDVIKAVDEGYRLPP 271
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 24 VLEDSDNDELQDKRGCPA---YVSPEILRSHARYSGRAADMWSLGVILY-TMLVGRYPFN 79
VLED D + RG + SPE + ++ +++ A+D+WS G++L+ M G P+
Sbjct: 196 VLED-DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTS-ASDVWSYGIVLWEVMSYGERPYW 252
Query: 80 DSEHTSLFLKISRGQFITP 98
+ + + + G + P
Sbjct: 253 EMSNQDVIKAVDEGYRLPP 271
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 26.2 bits (56), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 24 VLEDSDNDELQDKRGCPA---YVSPEILRSHARYSGRAADMWSLGVILY-TMLVGRYPFN 79
VLED D + RG + SPE + ++ +++ A+D+WS G++L+ M G P+
Sbjct: 196 VLED-DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTS-ASDVWSYGIVLWEVMSYGERPYW 252
Query: 80 DSEHTSLFLKISRGQFITP 98
+ + + + G + P
Sbjct: 253 EMSNQDVIKAVDEGYRLPP 271
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 24 VLEDSDNDELQDKRGCPA---YVSPEILRSHARYSGRAADMWSLGVILY-TMLVGRYPFN 79
VLED D + RG + SPE + ++ +++ A+D+WS G++L+ M G P+
Sbjct: 196 VLED-DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTS-ASDVWSYGIVLWEVMSYGERPYW 252
Query: 80 DSEHTSLFLKISRGQFITP 98
+ + + + G + P
Sbjct: 253 EMSNQDVIKAVDEGYRLPP 271
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 24 VLEDSDNDELQDKRGCPA---YVSPEILRSHARYSGRAADMWSLGVILY-TMLVGRYPFN 79
VLED D + RG + SPE + ++ +++ A+D+WS G++L+ M G P+
Sbjct: 196 VLED-DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTS-ASDVWSYGIVLWEVMSYGERPYW 252
Query: 80 DSEHTSLFLKISRGQFITP 98
+ + + + G + P
Sbjct: 253 EMSNQDVIKAVDEGYRLPP 271
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 26.2 bits (56), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 24 VLEDSDNDELQDKRGCPA---YVSPEILRSHARYSGRAADMWSLGVILY-TMLVGRYPFN 79
VLED D + RG + SPE + ++ +++ A+D+WS G++L+ M G P+
Sbjct: 196 VLED-DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTS-ASDVWSYGIVLWEVMSYGERPYW 252
Query: 80 DSEHTSLFLKISRGQFITP 98
+ + + + G + P
Sbjct: 253 EMSNQDVIKAVDEGYRLPP 271
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 26.2 bits (56), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 24 VLEDSDNDELQDKRGCPA---YVSPEILRSHARYSGRAADMWSLGVILY-TMLVGRYPFN 79
VLED D + RG + SPE + ++ +++ A+D+WS G++L+ M G P+
Sbjct: 184 VLED-DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTS-ASDVWSYGIVLWEVMSYGERPYW 240
Query: 80 DSEHTSLFLKISRGQFITP 98
+ + + + G + P
Sbjct: 241 EMSNQDVIKAVDEGYRLPP 259
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 24 VLEDSDNDELQDKRGCPA---YVSPEILRSHARYSGRAADMWSLGVILY-TMLVGRYPFN 79
VLED D + RG + SPE + ++ +++ A+D+WS G++L+ M G P+
Sbjct: 196 VLED-DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTS-ASDVWSYGIVLWEVMSYGERPYW 252
Query: 80 DSEHTSLFLKISRGQFITP 98
+ + + + G + P
Sbjct: 253 EMSNQDVIKAVDEGYRLPP 271
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,899,653
Number of Sequences: 62578
Number of extensions: 180776
Number of successful extensions: 1584
Number of sequences better than 100.0: 753
Number of HSP's better than 100.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 556
Number of HSP's gapped (non-prelim): 878
length of query: 159
length of database: 14,973,337
effective HSP length: 91
effective length of query: 68
effective length of database: 9,278,739
effective search space: 630954252
effective search space used: 630954252
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)