Query psy14701
Match_columns 136
No_of_seqs 119 out of 485
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 18:27:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14701.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14701hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fvt_A Conserved hypothetical 100.0 4.3E-40 1.5E-44 243.5 9.8 106 2-110 23-129 (135)
2 2fi9_A Outer membrane protein; 100.0 6.6E-39 2.2E-43 234.9 10.1 102 2-107 25-127 (128)
3 2gm2_A Conserved hypothetical 100.0 1.3E-38 4.6E-43 234.6 9.0 104 2-110 21-126 (132)
4 3cpk_A Uncharacterized protein 100.0 3.1E-37 1E-41 231.8 10.3 105 2-109 21-149 (150)
5 2ab1_A Hypothetical protein; H 100.0 1.2E-35 4.2E-40 216.2 9.8 101 2-106 13-120 (122)
6 2cyj_A Hypothetical protein PH 100.0 3E-33 1E-37 202.6 4.4 98 2-105 10-115 (118)
7 1ihn_A Hypothetical protein MT 100.0 2.3E-31 8E-36 191.5 2.7 92 2-105 11-110 (113)
8 3lhi_A Putative 6-phosphogluco 65.2 5 0.00017 30.6 3.4 28 37-64 117-144 (232)
9 3kkj_A Amine oxidase, flavin-c 52.7 6.2 0.00021 27.1 1.7 30 48-83 3-33 (336)
10 3nwp_A 6-phosphogluconolactona 52.1 10 0.00034 29.0 3.0 24 41-64 122-146 (233)
11 3lwd_A 6-phosphogluconolactona 50.1 12 0.00043 28.4 3.2 25 40-64 117-142 (226)
12 3e15_A Glucose-6-phosphate 1-d 48.0 10 0.00034 30.7 2.5 21 44-64 155-175 (312)
13 3tx2_A Probable 6-phosphogluco 47.7 14 0.00049 28.4 3.3 18 45-62 142-159 (251)
14 3hn6_A Glucosamine-6-phosphate 45.6 17 0.00057 28.8 3.4 25 39-63 143-167 (289)
15 1vl1_A 6PGL, 6-phosphogluconol 43.9 16 0.00056 27.8 3.1 23 39-61 128-151 (232)
16 3oc6_A 6-phosphogluconolactona 43.3 16 0.00054 28.1 2.9 18 45-62 140-157 (248)
17 3eb9_A 6-phosphogluconolactona 40.6 11 0.00037 29.4 1.6 19 46-64 151-169 (266)
18 2obn_A Hypothetical protein; s 37.9 27 0.00092 28.6 3.6 47 32-82 59-108 (349)
19 3ico_A 6PGL, 6-phosphogluconol 37.1 16 0.00055 28.5 2.1 17 46-62 159-175 (268)
20 2r7a_A Bacterial heme binding 35.1 1E+02 0.0034 22.5 6.2 38 37-82 51-89 (256)
21 2bkx_A Glucosamine-6-phosphate 34.6 32 0.0011 25.5 3.4 26 36-61 114-139 (242)
22 1y89_A DEVB protein; structura 34.1 20 0.00068 27.1 2.1 16 46-61 130-145 (238)
23 3md9_A Hemin-binding periplasm 33.5 57 0.0019 23.9 4.6 39 36-82 50-89 (255)
24 2q8p_A Iron-regulated surface 32.1 26 0.00089 25.9 2.4 37 37-82 52-89 (260)
25 3css_A 6-phosphogluconolactona 31.8 19 0.00066 27.8 1.7 16 46-61 154-169 (267)
26 1n2z_A Vitamin B12 transport p 31.3 47 0.0016 24.3 3.8 38 37-82 49-87 (245)
27 3psh_A Protein HI_1472; substr 31.0 50 0.0017 25.3 4.0 39 36-83 75-114 (326)
28 1r02_A Orexin-A, hypocretin-1; 30.6 20 0.00068 19.8 1.1 19 84-102 11-29 (33)
29 1ne7_A Glucosamine-6-phosphate 29.6 46 0.0016 25.8 3.6 27 38-64 121-147 (289)
30 2d59_A Hypothetical protein PH 28.4 72 0.0025 22.0 4.1 42 30-75 7-48 (144)
31 1iv0_A Hypothetical protein; r 28.0 1.2E+02 0.0042 19.8 5.1 46 35-81 40-91 (98)
32 2r79_A Periplasmic binding pro 27.7 53 0.0018 24.7 3.6 39 36-82 50-89 (283)
33 2bib_A CBPE, teichoic acid pho 26.8 60 0.002 27.1 4.0 39 38-78 238-277 (547)
34 1fs5_A Glucosamine-6-phosphate 25.7 44 0.0015 25.3 2.8 25 37-61 120-144 (266)
35 1nu0_A Hypothetical protein YQ 25.1 19 0.00064 25.5 0.5 58 34-92 41-109 (138)
36 1fs1_A SKP2 F-BOX, cyclin A/CD 24.5 34 0.0012 19.3 1.5 36 62-97 10-46 (53)
37 3r27_A HnRNP L, heterogeneous 23.7 1.6E+02 0.0053 19.4 5.0 27 31-57 31-57 (100)
38 1id1_A Putative potassium chan 21.8 74 0.0025 21.4 3.1 39 48-92 4-45 (153)
39 2g0t_A Conserved hypothetical 21.4 37 0.0013 27.7 1.7 42 37-82 81-124 (350)
40 4hn9_A Iron complex transport 20.3 1E+02 0.0035 23.8 4.0 36 37-82 108-144 (335)
41 3zqu_A Probable aromatic acid 20.3 53 0.0018 24.8 2.2 46 49-96 6-52 (209)
No 1
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=100.00 E-value=4.3e-40 Score=243.55 Aligned_cols=106 Identities=25% Similarity=0.357 Sum_probs=102.3
Q ss_pred cEEEeCCcEEecCEEEeCCceeeccCCCCCCCChhHHHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHHhh-cccee
Q psy14701 2 GFRLSNNSVVVGPLAVFNKCVFSWNILDDSDINMESLSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVRKH-CNVEV 80 (136)
Q Consensus 2 gf~i~ng~~~~gsviv~p~~v~~W~~~~~~dl~~e~l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~~~-I~vEv 80 (136)
||+| ||++|.||++++|++++.|+++++++|++++|+.++.+.|+||+||||||+++ .+++|+++++|+++ |++|+
T Consensus 23 ~f~i-ng~~~~gsilv~p~~~~~W~~~~~~~l~~e~l~~l~~~~p~pevliiGTG~~~--~~l~p~l~~~l~~~GI~vE~ 99 (135)
T 2fvt_A 23 GFYF-AGMSHQGSLLFLPDAVWGWDVTKPEQIDRYSLQRVFDNANAIDTLIVGTGADV--WIAPRQLREALRGVNVVLDT 99 (135)
T ss_dssp EEEC-SSSEECSEEEECSSCEEEESCCSTTCCCTTTTHHHHHTTTSCSEEEEECTTSC--CCCCHHHHHHHHTTTCEEEE
T ss_pred EEEE-CCEEEEeCEEEeCCCccccCCCCcccCCHHHHHHHHhcCCCCCEEEEcCCCCC--CcCCHHHHHHHHHcCCEEEE
Confidence 7999 79999999999999999999999999999999999999999999999999999 56999999999999 99999
Q ss_pred cChHHHHHHHHHhhhcchhhhhhcccccCC
Q psy14701 81 LPTERAIATFNFMVSEGRVAGAALVPPVRI 110 (136)
Q Consensus 81 M~T~aAcrTyN~L~sEgR~VaAALip~~~~ 110 (136)
|+|++||||||+|++|||+|||||||+++-
T Consensus 100 M~T~aAcrTyNiL~~EgR~VaAaLi~~~~~ 129 (135)
T 2fvt_A 100 MQTGPAIRTYNIMIGERRRVAAALIAVPLE 129 (135)
T ss_dssp ECHHHHHHHHHHHHHHTSCEEEEEECCCTT
T ss_pred eCHHHHHHHHHHHHhCCCcEEEEEcCCCch
Confidence 999999999999999999999999998763
No 2
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=100.00 E-value=6.6e-39 Score=234.86 Aligned_cols=102 Identities=21% Similarity=0.294 Sum_probs=98.6
Q ss_pred cEEEeCCcEEecCEEEeCCceeeccCCCCCCCChhHHHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHHhh-cccee
Q psy14701 2 GFRLSNNSVVVGPLAVFNKCVFSWNILDDSDINMESLSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVRKH-CNVEV 80 (136)
Q Consensus 2 gf~i~ng~~~~gsviv~p~~v~~W~~~~~~dl~~e~l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~~~-I~vEv 80 (136)
||+| ||++|.||++++|+++..|++++ +++++++|+.++.+.|+||+||||||.+. +++||+++++|+++ |++|+
T Consensus 25 ~f~i-~g~~~~g~i~v~p~~~~~W~~~~-~~l~~~~l~~l~~~~p~pevliiGtG~~~--~~l~p~~~~~l~~~GI~vE~ 100 (128)
T 2fi9_A 25 GFRF-ADMSHRGSIICIPSGIYGIDMTG-PVPTQEDISRVLEESDQIEVLLIGTGVEL--LRLPEELRVLLWEKRISSDT 100 (128)
T ss_dssp EEEE-TTEEEESEEEEETTEEEEECCSS-SSCCTGGGHHHHHTGGGCSEEEEECTTSC--CCCCHHHHHHHHHTTCEEEE
T ss_pred EEEE-CCEEEEeCEEEeCCCeeccCCCc-CCCCHHHHHHHHhcCCCCCEEEECCCCCC--CCCCHHHHHHHHHcCCEEEE
Confidence 7999 79999999999999999999999 99999999999999988999999999997 67999999999999 99999
Q ss_pred cChHHHHHHHHHhhhcchhhhhhcccc
Q psy14701 81 LPTERAIATFNFMVSEGRVAGAALVPP 107 (136)
Q Consensus 81 M~T~aAcrTyN~L~sEgR~VaAALip~ 107 (136)
|+|++||||||+|++|||+|||||||.
T Consensus 101 m~T~aAcrtyNiL~~EgR~VaaaLi~~ 127 (128)
T 2fi9_A 101 MSTGAAVRTFNVLLAEDRAVAALLFAV 127 (128)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eCHHHHHHHHHHHHhCCCcEEEEEEec
Confidence 999999999999999999999999984
No 3
>2gm2_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Xanthomonas campestris PV}
Probab=100.00 E-value=1.3e-38 Score=234.60 Aligned_cols=104 Identities=17% Similarity=0.309 Sum_probs=99.4
Q ss_pred cEEEeCCcEEecCEEEeCCce-eeccCCCCCCCChhHHHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHHhh-ccce
Q psy14701 2 GFRLSNNSVVVGPLAVFNKCV-FSWNILDDSDINMESLSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVRKH-CNVE 79 (136)
Q Consensus 2 gf~i~ng~~~~gsviv~p~~v-~~W~~~~~~dl~~e~l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~~~-I~vE 79 (136)
||+| ||++|.||++++|+++ ..|+++++++|++++|+.++...| |+||||||+++ ++++|+++++|+++ |++|
T Consensus 21 ~f~i-~g~~~~g~ilv~p~~~v~~W~~~~~~~l~~e~l~~ll~~~p--evliiGTG~~~--~~l~p~~~~~l~~~GI~vE 95 (132)
T 2gm2_A 21 HAKV-NEQILQQSFILMPDELVEHWPVPSLGQLQPAHMDAVLALNP--AVILLGTGERQ--QFPSTDVLAACLTRGIGLE 95 (132)
T ss_dssp CEEE-TTEEECSEEEECSSCEECCCCCSSGGGCCTTTSHHHHHHCC--SEEEEECTTSC--CCCCHHHHHHHHHHTCEEE
T ss_pred EEEE-CCEEEEeCEEEeCCCceeecCCCCcccCCHHHHHHHHhcCC--CEEEECCCCCC--CcCCHHHHHHHHHcCCEEE
Confidence 7999 7999999999999997 899999999999999999999876 99999999999 56999999999999 9999
Q ss_pred ecChHHHHHHHHHhhhcchhhhhhcccccCC
Q psy14701 80 VLPTERAIATFNFMVSEGRVAGAALVPPVRI 110 (136)
Q Consensus 80 vM~T~aAcrTyN~L~sEgR~VaAALip~~~~ 110 (136)
+|+|++||||||+|++|||+|||||+|+++-
T Consensus 96 ~m~T~aAcrTyNiL~~EgR~VaAaLi~~~~~ 126 (132)
T 2gm2_A 96 AMTNAAAARTYNVLASEGRRVALAMIVGGLE 126 (132)
T ss_dssp EECHHHHHHHHHHHHHHTCCEEEEEECCCCC
T ss_pred EeCHHHHHHHHHHHHhCCCcEEEEEccCChh
Confidence 9999999999999999999999999998764
No 4
>3cpk_A Uncharacterized protein Q7W7N7_borpa; BPP2477, BER31, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Bordetella parapertussis 12822} PDB: 2k2e_A
Probab=100.00 E-value=3.1e-37 Score=231.82 Aligned_cols=105 Identities=24% Similarity=0.293 Sum_probs=97.7
Q ss_pred cEEEeCCcEEecCEEEeCCce-eeccCCCCCCCChhHHHHHHhhCC----------------------CccEEEEecCCC
Q psy14701 2 GFRLSNNSVVVGPLAVFNKCV-FSWNILDDSDINMESLSLFLHLEP----------------------KLDVLIIGLGDF 58 (136)
Q Consensus 2 gf~i~ng~~~~gsviv~p~~v-~~W~~~~~~dl~~e~l~~l~~~~P----------------------~~EvlIiGTG~~ 58 (136)
||+| ||++|.||++++|++. ..|+++++++|++++|+.++.+.| +||+||||||.+
T Consensus 21 ~~~i-ng~~~~gsv~v~p~g~v~~W~~~~~~~i~~~~l~~l~~l~~~~~~~~~~~~~~~~~~~~~p~~~pEvliiGTG~~ 99 (150)
T 3cpk_A 21 YIEV-NQVRFSHAIAFAPEGPVASWPVQRPADITASLLQQAAGLAEVVRDPLAFLDEPEAGAGARPANAPEVLLVGTGRR 99 (150)
T ss_dssp EEEE-TTEEECSCEEECSSSCCEECCCSSGGGCCHHHHHHHHTCC-----------------------CCSEEEEECTTS
T ss_pred EEEE-CCEEEEcCEEEecCCceeecCCCChhhCCHHHHHHHHhcccccccchhhccccccccccccCCCCCEEEEcCCCC
Confidence 6899 7999999999999886 899999999999999999999855 789999999999
Q ss_pred CcCCCCCHHHHHHHHhh-ccceecChHHHHHHHHHhhhcchhhhhhcccccC
Q psy14701 59 KFNHTKLIPVINEVRKH-CNVEVLPTERAIATFNFMVSEGRVAGAALVPPVR 109 (136)
Q Consensus 59 ~~~~~l~~~l~~~l~~~-I~vEvM~T~aAcrTyN~L~sEgR~VaAALip~~~ 109 (136)
+ .+++++++++|+++ |++|+|+|++||||||+|++|||+|+|||+|++.
T Consensus 100 ~--~~l~p~~~~~L~~~GIgvE~M~T~aA~rTyNiL~~EgRrVaaaLi~~~~ 149 (150)
T 3cpk_A 100 Q--HLLGPEQVRPLLAMGVGVEAMDTQAAARTYNILMAEGRRVVVALLPDGD 149 (150)
T ss_dssp C--CCCCHHHHHHHHTTTCEEEEECHHHHHHHHHHHHHTTCCEEEEECCC--
T ss_pred C--CCCCHHHHHHHHHcCCEEEEeCHHHHHHHHHHHHhCCCcEEEEEecCCC
Confidence 9 56999999999999 9999999999999999999999999999999764
No 5
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=100.00 E-value=1.2e-35 Score=216.18 Aligned_cols=101 Identities=19% Similarity=0.298 Sum_probs=94.0
Q ss_pred cEEEeCCcEEec-CEEEeCCceeecc-----CCCCCCCChhHHHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHHhh
Q psy14701 2 GFRLSNNSVVVG-PLAVFNKCVFSWN-----ILDDSDINMESLSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVRKH 75 (136)
Q Consensus 2 gf~i~ng~~~~g-sviv~p~~v~~W~-----~~~~~dl~~e~l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~~~ 75 (136)
||+| ||++|.| |++++|+++.+|+ +.+++++++++|+.++.. +||+||||||.++.| ++||+++++|+++
T Consensus 13 ~~~i-ng~~~~~~siiv~p~~~~~w~w~~~g~~~~~~l~~~~l~~ll~~--~~evliiGtG~~~~~-~~~~~~~~~l~~~ 88 (122)
T 2ab1_A 13 QMKV-KGSNTTYKDCKVWPGGSRTWDWRETGTEHSPGVQPADVKEVVEK--GVQTLVIGRGMSEAL-KVPSSTVEYLKKH 88 (122)
T ss_dssp EEEE-TTCSCEESEEEEETTEEEEECHHHHTCCSSSCCCHHHHHHHHTT--CCSEEEEEECSSCCS-CCCHHHHHHHHHT
T ss_pred EEEE-CCEEEeCCCEEEECCccccCcccccCcCChhHCCHHHHHHHhhC--CCCEEEECCCCCCcc-CCCHHHHHHHHHc
Confidence 6899 7999999 9999999999998 899999999999999664 459999999999932 4999999999999
Q ss_pred -ccceecChHHHHHHHHHhhhcchhhhhhccc
Q psy14701 76 -CNVEVLPTERAIATFNFMVSEGRVAGAALVP 106 (136)
Q Consensus 76 -I~vEvM~T~aAcrTyN~L~sEgR~VaAALip 106 (136)
|++|+|+|++||||||+|++|||+|||||+.
T Consensus 89 gI~ve~m~T~~A~rtyN~L~~EgR~VaAal~~ 120 (122)
T 2ab1_A 89 GIDVRVLQTEQAVKEYNALVAQGVRVGGVFHS 120 (122)
T ss_dssp TCEEEEECHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEEeCHHHHHHHHHHHHhCCCcEEEEEee
Confidence 9999999999999999999999999999974
No 6
>2cyj_A Hypothetical protein PH1505; conserved hypothetical protein, structural genomics, NPPSFA; HET: OCS; 1.50A {Pyrococcus horikoshii} SCOP: c.103.1.1
Probab=99.97 E-value=3e-33 Score=202.63 Aligned_cols=98 Identities=16% Similarity=0.169 Sum_probs=89.1
Q ss_pred cEEEeCCcEEecCEEEeCCce---eeccCCC-----CCCCChhHHHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHH
Q psy14701 2 GFRLSNNSVVVGPLAVFNKCV---FSWNILD-----DSDINMESLSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVR 73 (136)
Q Consensus 2 gf~i~ng~~~~gsviv~p~~v---~~W~~~~-----~~dl~~e~l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~ 73 (136)
+|+| ||++|.||++++|+++ ..|+... +++|++++|+.++...| |+||||||.++. .++|+++++.|+
T Consensus 10 ~~~i-~g~~~~~sviv~p~g~v~~~~w~~~~~~~gt~~~l~~~~~~~ll~~~~--evlliGTG~~~~-~~~~~~~~~~l~ 85 (118)
T 2cyj_A 10 LVKI-DGKEFDHDIVIYPSGRIERRMKEISKKKHGTSHKLDPEELEKYLVEDF--DVLLVGTGIYGM-LSLLPESKKLVE 85 (118)
T ss_dssp EEEE-TTEEESSCEEECTTSCEEECCTHHHHHHHSSTTEECHHHHHTTTTSCC--SEEEEEECTTCC-CEECHHHHHHTT
T ss_pred EEEE-CCEEEeeCEEEeCCCcccccccCccccccCCcccCCHHHHHHHHhcCC--CEEEECCCCCcc-ccCCHHHHHHHH
Confidence 5899 7999999999999987 6666544 78899999999999986 999999999974 469999999999
Q ss_pred hhccceecChHHHHHHHHHhhhcchhhhhhcc
Q psy14701 74 KHCNVEVLPTERAIATFNFMVSEGRVAGAALV 105 (136)
Q Consensus 74 ~~I~vEvM~T~aAcrTyN~L~sEgR~VaAALi 105 (136)
++ ++|+|+|++||||||+|+ |||+|+|||=
T Consensus 86 ~~-~ve~M~T~aAcrTYNiL~-EgRrV~aalh 115 (118)
T 2cyj_A 86 DK-EVIEKPTKEALKLLEELW-GKKRILAIIH 115 (118)
T ss_dssp TS-EEEEECHHHHHHHHHHHB-TTBCEEEEEE
T ss_pred HC-CcEEeCHHHHHHHHHHHh-cCCeEEEEEe
Confidence 99 999999999999999999 9999999983
No 7
>1ihn_A Hypothetical protein MTH938; methanobacterium thermoautotrophicum, unknown function; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.103.1.1
Probab=99.96 E-value=2.3e-31 Score=191.46 Aligned_cols=92 Identities=23% Similarity=0.180 Sum_probs=79.8
Q ss_pred cEEEeCCcEEecCEEEeCCce---eeccCCC-----CCCCChhHHHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHH
Q psy14701 2 GFRLSNNSVVVGPLAVFNKCV---FSWNILD-----DSDINMESLSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVR 73 (136)
Q Consensus 2 gf~i~ng~~~~gsviv~p~~v---~~W~~~~-----~~dl~~e~l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~ 73 (136)
+|+| ||++|.||++++|+++ ..|+... .++|++++|+.++...| |+||||||.++.+ +++++++
T Consensus 11 ~~~i-~g~~~~~sviv~p~g~v~~~~w~~~~~~~gt~~~l~~~~~~~ll~~~~--evlliGTG~~~~~-~~~~~~~---- 82 (113)
T 1ihn_A 11 SVTY-RGREYRSDIVVHVDGSVTPRRKEISRRKYGTSHVMAEEELEELLEEKP--ESIIIGSGVHGAL-ETGFRSD---- 82 (113)
T ss_dssp EEEE-TTEEECSCEEECTTSCEEECCHHHHHHHHSSTTEECTHHHHHHHTTCC--SEEEEECCTTCCC-EESSCCS----
T ss_pred EEEE-CCEEEeeCEEEeCCCcccccccCccccccCccccCCHHHHHHHHhcCC--CEEEECCCCCccc-cCChhhE----
Confidence 5899 7999999999999987 5565543 68899999999999987 9999999999743 3455553
Q ss_pred hhccceecChHHHHHHHHHhhhcchhhhhhcc
Q psy14701 74 KHCNVEVLPTERAIATFNFMVSEGRVAGAALV 105 (136)
Q Consensus 74 ~~I~vEvM~T~aAcrTyN~L~sEgR~VaAALi 105 (136)
+|+|+|++||||||+|++|||+|+|||=
T Consensus 83 ----ve~M~T~aAcrTYNiL~~EgRrV~aalh 110 (113)
T 1ihn_A 83 ----ATVLPTCEAIKRYNEERSAGRRVAAIIH 110 (113)
T ss_dssp ----CEEECHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred ----EEEcChHHHHHHHHHHHhCCCeEEEEEe
Confidence 9999999999999999999999999983
No 8
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=65.22 E-value=5 Score=30.61 Aligned_cols=28 Identities=25% Similarity=0.336 Sum_probs=20.9
Q ss_pred HHHHHHhhCCCccEEEEecCCCCcCCCC
Q psy14701 37 SLSLFLHLEPKLDVLIIGLGDFKFNHTK 64 (136)
Q Consensus 37 ~l~~l~~~~P~~EvlIiGTG~~~~~~~l 64 (136)
..+..+...|.+|++++|.|..++.-++
T Consensus 117 ~ye~~i~~~~~~Dl~lLG~G~dGH~as~ 144 (232)
T 3lhi_A 117 VVDYALKHYKQPDVLILGMGNDGHTASI 144 (232)
T ss_dssp HHHHHHHHCCCCSEEEECCCTTSCBTTB
T ss_pred HHHHHHhhCCCCCEEEEccCCCCCeeec
Confidence 4455556678899999999999865433
No 9
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=52.67 E-value=6.2 Score=27.05 Aligned_cols=30 Identities=17% Similarity=0.278 Sum_probs=24.7
Q ss_pred ccEEEEecCCCCcCCCCCHHHHHHHHhh-ccceecCh
Q psy14701 48 LDVLIIGLGDFKFNHTKLIPVINEVRKH-CNVEVLPT 83 (136)
Q Consensus 48 ~EvlIiGTG~~~~~~~l~~~l~~~l~~~-I~vEvM~T 83 (136)
.||+|||-|..+. .....|.++ +.|.+.+-
T Consensus 3 ~dV~IIGaGpaGL------~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 3 VPIAIIGTGIAGL------SAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CCEEEECCSHHHH------HHHHHHHHTTCCEEEECS
T ss_pred CCEEEECcCHHHH------HHHHHHHHCCCCEEEEEC
Confidence 5899999999993 566688888 88888774
No 10
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=52.08 E-value=10 Score=29.01 Aligned_cols=24 Identities=25% Similarity=0.398 Sum_probs=17.1
Q ss_pred HHhhCC-CccEEEEecCCCCcCCCC
Q psy14701 41 FLHLEP-KLDVLIIGLGDFKFNHTK 64 (136)
Q Consensus 41 l~~~~P-~~EvlIiGTG~~~~~~~l 64 (136)
.+...| .+|++++|.|..++.-++
T Consensus 122 ~i~~~~~~~Dl~lLG~G~dGHias~ 146 (233)
T 3nwp_A 122 SLSNFPRPFDVVVLGMGNDGHTCSW 146 (233)
T ss_dssp HTTTSCSSBSEEEECCCTTSCBTTB
T ss_pred HHHhcCCCCCEEEEccCCCCCeeec
Confidence 333444 899999999999865333
No 11
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=50.08 E-value=12 Score=28.37 Aligned_cols=25 Identities=16% Similarity=0.074 Sum_probs=17.5
Q ss_pred HHHhhC-CCccEEEEecCCCCcCCCC
Q psy14701 40 LFLHLE-PKLDVLIIGLGDFKFNHTK 64 (136)
Q Consensus 40 ~l~~~~-P~~EvlIiGTG~~~~~~~l 64 (136)
..+... |.+|++++|.|..++.-++
T Consensus 117 ~~i~~~~~~~Dl~lLG~G~dGH~as~ 142 (226)
T 3lwd_A 117 ERLESLPWPASAVILGMGGDGHTASL 142 (226)
T ss_dssp HHHHTSCSSBSEEEECCCTTSCBTTB
T ss_pred HHHHhcCCCCCEEEECcCCCCCeeec
Confidence 334433 4899999999999865333
No 12
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}
Probab=48.02 E-value=10 Score=30.68 Aligned_cols=21 Identities=24% Similarity=0.289 Sum_probs=16.4
Q ss_pred hCCCccEEEEecCCCCcCCCC
Q psy14701 44 LEPKLDVLIIGLGDFKFNHTK 64 (136)
Q Consensus 44 ~~P~~EvlIiGTG~~~~~~~l 64 (136)
..|.+|++++|.|..++.-++
T Consensus 155 ~~g~~DL~LLGiG~DGHiasl 175 (312)
T 3e15_A 155 KYTKVDIAILGMGSDFHIASL 175 (312)
T ss_dssp HHCSCCEEEECCCTTSCBTTB
T ss_pred hcCCCcEEEEccCCCCceeec
Confidence 348899999999999854433
No 13
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=47.70 E-value=14 Score=28.40 Aligned_cols=18 Identities=28% Similarity=0.508 Sum_probs=15.4
Q ss_pred CCCccEEEEecCCCCcCC
Q psy14701 45 EPKLDVLIIGLGDFKFNH 62 (136)
Q Consensus 45 ~P~~EvlIiGTG~~~~~~ 62 (136)
.|.+|++++|.|..++.-
T Consensus 142 ~~~~Dl~lLG~G~DGH~a 159 (251)
T 3tx2_A 142 CPAFDVHLLGMGGEGHIN 159 (251)
T ss_dssp SCCCSEEEECCCTTCCBT
T ss_pred CCCCCEEEECCCCCCceE
Confidence 578999999999998654
No 14
>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi}
Probab=45.61 E-value=17 Score=28.79 Aligned_cols=25 Identities=8% Similarity=-0.057 Sum_probs=18.3
Q ss_pred HHHHhhCCCccEEEEecCCCCcCCC
Q psy14701 39 SLFLHLEPKLDVLIIGLGDFKFNHT 63 (136)
Q Consensus 39 ~~l~~~~P~~EvlIiGTG~~~~~~~ 63 (136)
+..+...+.+|++++|.|..++.-+
T Consensus 143 e~~i~~~~~~Dl~lLGmG~DGH~as 167 (289)
T 3hn6_A 143 EKKIKSFGGIMLFVGGIGPDGHIAF 167 (289)
T ss_dssp HHHHHHTTSCSEEEEECCTTSCBTT
T ss_pred HHHHhhcCCCCEEEEccCCCCceee
Confidence 3444555779999999999975543
No 15
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=43.94 E-value=16 Score=27.75 Aligned_cols=23 Identities=17% Similarity=0.257 Sum_probs=17.3
Q ss_pred HHHHhh-CCCccEEEEecCCCCcC
Q psy14701 39 SLFLHL-EPKLDVLIIGLGDFKFN 61 (136)
Q Consensus 39 ~~l~~~-~P~~EvlIiGTG~~~~~ 61 (136)
+..+.. .|.+|++++|.|..++.
T Consensus 128 ~~~i~~~~~~~Dl~lLGiG~dGH~ 151 (232)
T 1vl1_A 128 EREIRSATDQFDLAILGMGPDGHV 151 (232)
T ss_dssp HHHHHHHCSSCSEEEECCCTTSCB
T ss_pred HHHHHhcCCCCCEEEEecCCCCch
Confidence 344444 68899999999998654
No 16
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=43.33 E-value=16 Score=28.10 Aligned_cols=18 Identities=28% Similarity=0.527 Sum_probs=15.5
Q ss_pred CCCccEEEEecCCCCcCC
Q psy14701 45 EPKLDVLIIGLGDFKFNH 62 (136)
Q Consensus 45 ~P~~EvlIiGTG~~~~~~ 62 (136)
.|.+|++++|.|..++.-
T Consensus 140 ~~~~Dl~lLG~G~dGH~a 157 (248)
T 3oc6_A 140 VPGFDVHLLGMGGEGHVN 157 (248)
T ss_dssp SCSEEEEEECCCTTCCBT
T ss_pred CCCCCEEEECCCCCCCEE
Confidence 578999999999998654
No 17
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=40.63 E-value=11 Score=29.37 Aligned_cols=19 Identities=32% Similarity=0.606 Sum_probs=15.2
Q ss_pred CCccEEEEecCCCCcCCCC
Q psy14701 46 PKLDVLIIGLGDFKFNHTK 64 (136)
Q Consensus 46 P~~EvlIiGTG~~~~~~~l 64 (136)
|.+|++++|.|..++.-++
T Consensus 151 p~~Dl~lLGmG~DGH~as~ 169 (266)
T 3eb9_A 151 PVFDVVLLGLGSDGHTASI 169 (266)
T ss_dssp ECCSEEEECCCTTSCBTTB
T ss_pred CCCCEEEEccCCCCCeeec
Confidence 5789999999999865433
No 18
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=37.86 E-value=27 Score=28.61 Aligned_cols=47 Identities=17% Similarity=0.235 Sum_probs=29.9
Q ss_pred CCCh-hHHHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHHhh--ccceecC
Q psy14701 32 DINM-ESLSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVRKH--CNVEVLP 82 (136)
Q Consensus 32 dl~~-e~l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~~~--I~vEvM~ 82 (136)
++.. .+++..+...| |.+|+|+-..+ -.+|++.++.+.+. -|..+.+
T Consensus 59 gipi~~~l~~al~~~~--d~lvig~a~~g--G~l~~~~~~~i~~Al~~G~~Vvs 108 (349)
T 2obn_A 59 YVPIVKSVEAALEYKP--QVLVIGIAPKG--GGIPDDYWIELKTALQAGMSLVN 108 (349)
T ss_dssp CCCEESSHHHHGGGCC--SEEEECCCCCC--C-SCGGGHHHHHHHHHTTCEEEE
T ss_pred CCCccCCHHHHHhCCC--CEEEEEecCCC--CCCCHHHHHHHHHHHHcCCcEEe
Confidence 3445 78888887776 99999994444 23664555555544 4666643
No 19
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=37.10 E-value=16 Score=28.52 Aligned_cols=17 Identities=29% Similarity=0.604 Sum_probs=14.7
Q ss_pred CCccEEEEecCCCCcCC
Q psy14701 46 PKLDVLIIGLGDFKFNH 62 (136)
Q Consensus 46 P~~EvlIiGTG~~~~~~ 62 (136)
|.+|++++|.|..++.-
T Consensus 159 p~~Dl~lLGmG~DGH~a 175 (268)
T 3ico_A 159 PNFDVHLLGMGPEGHIN 175 (268)
T ss_dssp CCCSEEEECCCTTCCBT
T ss_pred CCcceEEeccCCccccc
Confidence 68999999999998654
No 20
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=35.08 E-value=1e+02 Score=22.54 Aligned_cols=38 Identities=32% Similarity=0.371 Sum_probs=27.6
Q ss_pred HHHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHHhh-ccceecC
Q psy14701 37 SLSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVRKH-CNVEVLP 82 (136)
Q Consensus 37 ~l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~~~-I~vEvM~ 82 (136)
+++.+..++| |+||...+. .+++..+.|++. |.+-+++
T Consensus 51 n~E~i~~l~P--DLIi~~~~~------~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 51 SSEGILSLRP--DSVITWQDA------GPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp CHHHHHTTCC--SEEEEETTC------SCHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHccCC--CEEEEcCCC------CCHHHHHHHHHcCCcEEEec
Confidence 5677788888 998875432 246788889888 8776664
No 21
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=34.57 E-value=32 Score=25.53 Aligned_cols=26 Identities=12% Similarity=0.208 Sum_probs=19.1
Q ss_pred hHHHHHHhhCCCccEEEEecCCCCcC
Q psy14701 36 ESLSLFLHLEPKLDVLIIGLGDFKFN 61 (136)
Q Consensus 36 e~l~~l~~~~P~~EvlIiGTG~~~~~ 61 (136)
+..+..+...+.+|++++|.|..++.
T Consensus 114 ~~y~~~i~~~~~~Dl~llGiG~dgh~ 139 (242)
T 2bkx_A 114 RRYEQLVDSLGDTDIQLLGIGRNGHI 139 (242)
T ss_dssp HHHHHHHHHTTSCSEEEECCCTTSCB
T ss_pred HHHHHHHHhcCCCCEEEECcCCCCcc
Confidence 34455555667899999999988754
No 22
>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str}
Probab=34.10 E-value=20 Score=27.08 Aligned_cols=16 Identities=25% Similarity=0.582 Sum_probs=13.6
Q ss_pred CCccEEEEecCCCCcC
Q psy14701 46 PKLDVLIIGLGDFKFN 61 (136)
Q Consensus 46 P~~EvlIiGTG~~~~~ 61 (136)
|.+|++++|.|..++.
T Consensus 130 ~~~Dl~lLGiG~dGH~ 145 (238)
T 1y89_A 130 PVFDWILLGVGADGHT 145 (238)
T ss_dssp ECCSEEEECCCTTSCB
T ss_pred CCCCEEEECCCCCCce
Confidence 5789999999998754
No 23
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=33.54 E-value=57 Score=23.92 Aligned_cols=39 Identities=18% Similarity=0.253 Sum_probs=28.5
Q ss_pred hHHHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHHhh-ccceecC
Q psy14701 36 ESLSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVRKH-CNVEVLP 82 (136)
Q Consensus 36 e~l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~~~-I~vEvM~ 82 (136)
-+++.+..++| |+||.+.+.. +.+..+.|++. |.+-+++
T Consensus 50 ~n~E~i~~l~P--DlIi~~~~~~------~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 50 LNAEGILAMKP--TMLLVSELAQ------PSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CCHHHHHTTCC--SEEEEETTCS------CHHHHHHHHHTTCEEEEEC
T ss_pred CCHHHHHccCC--CEEEEcCCcC------chhHHHHHHHcCCcEEEeC
Confidence 46777789999 9888765432 35778889888 8777764
No 24
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=32.08 E-value=26 Score=25.86 Aligned_cols=37 Identities=5% Similarity=-0.118 Sum_probs=26.7
Q ss_pred HHHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHHhh-ccceecC
Q psy14701 37 SLSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVRKH-CNVEVLP 82 (136)
Q Consensus 37 ~l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~~~-I~vEvM~ 82 (136)
+++.+..++| |+||...+. ++++.+.|++. |.+-+++
T Consensus 52 n~E~i~~l~P--DLIi~~~~~-------~~~~~~~L~~~gipvv~~~ 89 (260)
T 2q8p_A 52 NVEAVKKLKP--THVLSVSTI-------KDEMQPFYKQLNMKGYFYD 89 (260)
T ss_dssp CHHHHHHTCC--SEEEEEGGG-------HHHHHHHHHHHTSCCEEEC
T ss_pred CHHHHHhcCC--CEEEecCcc-------CHHHHHHHHHcCCcEEEec
Confidence 5667788888 998875431 24677888888 8877664
No 25
>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogen protozoa consortium, SGPP, leish hydrolase; 1.70A {Leishmania braziliensis} PDB: 3ch7_A
Probab=31.78 E-value=19 Score=27.77 Aligned_cols=16 Identities=25% Similarity=0.696 Sum_probs=13.6
Q ss_pred CCccEEEEecCCCCcC
Q psy14701 46 PKLDVLIIGLGDFKFN 61 (136)
Q Consensus 46 P~~EvlIiGTG~~~~~ 61 (136)
|.+|++++|.|..++.
T Consensus 154 p~~Dl~lLGiG~dGH~ 169 (267)
T 3css_A 154 PVVDIVLLGFGSDGHT 169 (267)
T ss_dssp ECCSEEEEECCTTSCB
T ss_pred CCCCEEEECCCCCccc
Confidence 4789999999998754
No 26
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=31.28 E-value=47 Score=24.27 Aligned_cols=38 Identities=18% Similarity=0.267 Sum_probs=27.4
Q ss_pred HHHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHHhh-ccceecC
Q psy14701 37 SLSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVRKH-CNVEVLP 82 (136)
Q Consensus 37 ~l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~~~-I~vEvM~ 82 (136)
+++.+..++| |+||...+. .+++..+.|++. |.+-+++
T Consensus 49 n~E~i~~l~P--DLIi~~~~~------~~~~~~~~L~~~gipvv~~~ 87 (245)
T 1n2z_A 49 NLERIVALKP--DLVIAWRGG------NAERQVDQLASLGIKVMWVD 87 (245)
T ss_dssp CHHHHHHTCC--SEEEECTTT------SCHHHHHHHHHHTCCEEECC
T ss_pred CHHHHhccCC--CEEEEeCCC------CcHHHHHHHHHCCCcEEEeC
Confidence 5777788998 998864211 245788888888 8877765
No 27
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=31.01 E-value=50 Score=25.28 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=28.9
Q ss_pred hHHHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHHhh-ccceecCh
Q psy14701 36 ESLSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVRKH-CNVEVLPT 83 (136)
Q Consensus 36 e~l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~~~-I~vEvM~T 83 (136)
-+++.++.++| |+||.+.+ .+++..+.|++. |.+-+++.
T Consensus 75 ~n~E~i~~l~P--DlIi~~~~-------~~~~~~~~L~~~Gipvv~~~~ 114 (326)
T 3psh_A 75 VNIESLLALKP--DVVFVTNY-------APSEMIKQISDVNIPVVAISL 114 (326)
T ss_dssp BCHHHHHHTCC--SEEEEETT-------CCHHHHHHHHTTTCCEEEECS
T ss_pred CCHHHHHccCC--CEEEEeCC-------CChHHHHHHHHcCCCEEEEec
Confidence 46677788998 99887632 135788899998 88887753
No 28
>1r02_A Orexin-A, hypocretin-1; turn, helix-loop-helix, neuropeptide; NMR {Synthetic} SCOP: j.6.1.1 PDB: 1wso_A*
Probab=30.61 E-value=20 Score=19.79 Aligned_cols=19 Identities=11% Similarity=0.235 Sum_probs=14.6
Q ss_pred HHHHHHHHHhhhcchhhhh
Q psy14701 84 ERAIATFNFMVSEGRVAGA 102 (136)
Q Consensus 84 ~aAcrTyN~L~sEgR~VaA 102 (136)
.-+||.|-+|..-|+..|+
T Consensus 11 ~~sCrly~lL~r~G~aAaG 29 (33)
T 1r02_A 11 TCSCRLYELLHGAGNHAAG 29 (33)
T ss_dssp SSTHHHHHHHHTSCHHHHH
T ss_pred CCChhHHHHHHccCcchhe
Confidence 3479999999998874443
No 29
>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP: c.124.1.1
Probab=29.60 E-value=46 Score=25.81 Aligned_cols=27 Identities=7% Similarity=0.102 Sum_probs=18.4
Q ss_pred HHHHHhhCCCccEEEEecCCCCcCCCC
Q psy14701 38 LSLFLHLEPKLDVLIIGLGDFKFNHTK 64 (136)
Q Consensus 38 l~~l~~~~P~~EvlIiGTG~~~~~~~l 64 (136)
.+..+...+.+|++++|.|..++.-++
T Consensus 121 ye~~i~~~~~~Dl~lLGiG~dGH~asl 147 (289)
T 1ne7_A 121 FEEKIKAAGGIELFVGGIGPDGHIAFN 147 (289)
T ss_dssp HHHHHHHTTSCSEEEECCCTTCCSTTC
T ss_pred HHHHHHhcCCCCEEEEccCCCCcceec
Confidence 334444456789999999988754333
No 30
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=28.43 E-value=72 Score=21.96 Aligned_cols=42 Identities=12% Similarity=0.118 Sum_probs=29.7
Q ss_pred CCCCChhHHHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHHhh
Q psy14701 30 DSDINMESLSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVRKH 75 (136)
Q Consensus 30 ~~dl~~e~l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~~~ 75 (136)
++.++.+.|+.|+...- .+.|||.|.+. -.+...+.++|.+.
T Consensus 7 ~~~m~~~~l~~ll~~p~--~iaVVGas~~~--g~~G~~~~~~l~~~ 48 (144)
T 2d59_A 7 IDGLTDEDIREILTRYK--KIALVGASPKP--ERDANIVMKYLLEH 48 (144)
T ss_dssp SSCCCHHHHHHHHHHCC--EEEEETCCSCT--TSHHHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHcCCC--EEEEEccCCCC--CchHHHHHHHHHHC
Confidence 34467888998885433 79999998765 34566777777765
No 31
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=28.00 E-value=1.2e+02 Score=19.83 Aligned_cols=46 Identities=26% Similarity=0.398 Sum_probs=26.5
Q ss_pred hhHHHHHHhhCCCccEEEEe-----cCCCCcCCCCCHHHHHHHHhh-ccceec
Q psy14701 35 MESLSLFLHLEPKLDVLIIG-----LGDFKFNHTKLIPVINEVRKH-CNVEVL 81 (136)
Q Consensus 35 ~e~l~~l~~~~P~~EvlIiG-----TG~~~~~~~l~~~l~~~l~~~-I~vEvM 81 (136)
.+.|..+...+ .++.+|+| -|..+....--.++.+.|+++ +.++..
T Consensus 40 ~~~l~~li~e~-~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~ 91 (98)
T 1iv0_A 40 VEALLDFVRRE-GLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELW 91 (98)
T ss_dssp HHHHHHHHHHH-TCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHc-CCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 45566666653 25999999 455543233445666666665 444443
No 32
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=27.67 E-value=53 Score=24.68 Aligned_cols=39 Identities=28% Similarity=0.293 Sum_probs=27.9
Q ss_pred hHHHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHHhh-ccceecC
Q psy14701 36 ESLSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVRKH-CNVEVLP 82 (136)
Q Consensus 36 e~l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~~~-I~vEvM~ 82 (136)
-+++.+..++| |+||...+. -+++..+.|++. |.+-+++
T Consensus 50 ~n~E~i~~l~P--DLIi~~~~~------~~~~~~~~L~~~gipvv~~~ 89 (283)
T 2r79_A 50 LAAEGVLALRP--DILIGTEEM------GPPPVLKQLEGAGVRVETLS 89 (283)
T ss_dssp CCHHHHHTTCC--SEEEECTTC------CCHHHHHHHHHTTCCEEECC
T ss_pred CCHHHHHhcCC--CEEEEeCcc------CcHHHHHHHHHcCCcEEEec
Confidence 35677788988 998865422 235788889888 8777764
No 33
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=26.78 E-value=60 Score=27.07 Aligned_cols=39 Identities=8% Similarity=0.169 Sum_probs=26.4
Q ss_pred HHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHHhh-ccc
Q psy14701 38 LSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVRKH-CNV 78 (136)
Q Consensus 38 l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~~~-I~v 78 (136)
.+.+..+.| ++.||-+|.......|++++++.|+++ +.+
T Consensus 238 ~~fl~~v~P--~~aiiS~g~~n~~~hP~~evl~~l~~~g~~v 277 (547)
T 2bib_A 238 KDFIKNLSP--SLIVQTSDSLPWKNGVDSEYVNWLKERGIER 277 (547)
T ss_dssp HHHHHHHCC--SEEEESBSSCSBSSSBCHHHHHHHHTTTCEE
T ss_pred HHHHHhcCC--cEEEEcCCcccccCCCCHHHHHHHHhCCceE
Confidence 344455667 888888887532234788888888887 543
No 34
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Probab=25.69 E-value=44 Score=25.31 Aligned_cols=25 Identities=12% Similarity=0.111 Sum_probs=17.6
Q ss_pred HHHHHHhhCCCccEEEEecCCCCcC
Q psy14701 37 SLSLFLHLEPKLDVLIIGLGDFKFN 61 (136)
Q Consensus 37 ~l~~l~~~~P~~EvlIiGTG~~~~~ 61 (136)
..+..+.....+|++++|.|..++.
T Consensus 120 ~y~~~l~~~~~~Dl~llGiG~dGh~ 144 (266)
T 1fs5_A 120 QYEEKIRSYGKIHLFMGGVGNDGHI 144 (266)
T ss_dssp HHHHHHHHHCCCSEEEECCCTTCCS
T ss_pred HHHHHHHhcCCCCEEEEccCCCCCe
Confidence 3444444445689999999988654
No 35
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=25.10 E-value=19 Score=25.54 Aligned_cols=58 Identities=19% Similarity=0.142 Sum_probs=30.1
Q ss_pred ChhHHHHHHhhCCCccEEEEe-----cCCCCcCCCCCHHHHHHHHhh--ccc----eecChHHHHHHHHH
Q psy14701 34 NMESLSLFLHLEPKLDVLIIG-----LGDFKFNHTKLIPVINEVRKH--CNV----EVLPTERAIATFNF 92 (136)
Q Consensus 34 ~~e~l~~l~~~~P~~EvlIiG-----TG~~~~~~~l~~~l~~~l~~~--I~v----EvM~T~aAcrTyN~ 92 (136)
..+.+..+...+ .++.+|+| -|..+....--.+..+.|+++ +.| |-++|.+|-+.+.-
T Consensus 41 ~~~~l~~li~e~-~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DERlTT~~A~~~l~~ 109 (138)
T 1nu0_A 41 DWNIIERLLKEW-QPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFE 109 (138)
T ss_dssp CHHHHHHHHHHH-CCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC------
T ss_pred HHHHHHHHHHHc-CCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcCHHHHHHHHHH
Confidence 467787777764 25999999 465541111112444445443 444 44589999888853
No 36
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=24.46 E-value=34 Score=19.31 Aligned_cols=36 Identities=11% Similarity=0.111 Sum_probs=28.8
Q ss_pred CCCCHHHHHHHHhh-ccceecChHHHHHHHHHhhhcc
Q psy14701 62 HTKLIPVINEVRKH-CNVEVLPTERAIATFNFMVSEG 97 (136)
Q Consensus 62 ~~l~~~l~~~l~~~-I~vEvM~T~aAcrTyN~L~sEg 97 (136)
..+|.++...+-++ =.-+.......|+.++-+..+.
T Consensus 10 ~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~ 46 (53)
T 1fs1_A 10 DSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDE 46 (53)
T ss_dssp CSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCG
T ss_pred HHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCh
Confidence 56888998888888 5567777888999999988753
No 37
>3r27_A HnRNP L, heterogeneous nuclear ribonucleoprotein L; RBD fold, protein binding, nucleus; 2.04A {Homo sapiens}
Probab=23.71 E-value=1.6e+02 Score=19.37 Aligned_cols=27 Identities=7% Similarity=-0.022 Sum_probs=19.9
Q ss_pred CCCChhHHHHHHhhCCCccEEEEecCC
Q psy14701 31 SDINMESLSLFLHLEPKLDVLIIGLGD 57 (136)
Q Consensus 31 ~dl~~e~l~~l~~~~P~~EvlIiGTG~ 57 (136)
.++++++|..++...+++.-+.+-.++
T Consensus 31 ~~~te~~L~~lF~~fG~V~~v~i~~~k 57 (100)
T 3r27_A 31 DGVVEADLVEALQEFGPISYVVVMPKK 57 (100)
T ss_dssp TTCCHHHHHHHHGGGSCEEEEEEETTT
T ss_pred CCCCHHHHHHHHhccCCEEEEEEEcCC
Confidence 578999999999988866555554433
No 38
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=21.77 E-value=74 Score=21.41 Aligned_cols=39 Identities=21% Similarity=0.283 Sum_probs=26.9
Q ss_pred ccEEEEecCCCCcCCCCCHHHHHHHHhh-ccceecCh--HHHHHHHHH
Q psy14701 48 LDVLIIGLGDFKFNHTKLIPVINEVRKH-CNVEVLPT--ERAIATFNF 92 (136)
Q Consensus 48 ~EvlIiGTG~~~~~~~l~~~l~~~l~~~-I~vEvM~T--~aAcrTyN~ 92 (136)
..++|+|.|.-+ ..+.+.|.+. ..+-+.+. .+.|+...-
T Consensus 4 ~~vlI~G~G~vG------~~la~~L~~~g~~V~vid~~~~~~~~~~~~ 45 (153)
T 1id1_A 4 DHFIVCGHSILA------INTILQLNQRGQNVTVISNLPEDDIKQLEQ 45 (153)
T ss_dssp SCEEEECCSHHH------HHHHHHHHHTTCCEEEEECCCHHHHHHHHH
T ss_pred CcEEEECCCHHH------HHHHHHHHHCCCCEEEEECCChHHHHHHHH
Confidence 379999998877 3777788877 77777755 344554443
No 39
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=21.37 E-value=37 Score=27.70 Aligned_cols=42 Identities=21% Similarity=0.254 Sum_probs=27.5
Q ss_pred HHHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHHhh--ccceecC
Q psy14701 37 SLSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVRKH--CNVEVLP 82 (136)
Q Consensus 37 ~l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~~~--I~vEvM~ 82 (136)
+++..+...| |++|+|+-..+ -.+++..+..+.+. -|..+.+
T Consensus 81 d~~~al~~~~--d~lvig~a~~g--g~l~~~~~~~I~~Al~~G~nVvs 124 (350)
T 2g0t_A 81 SVEKAKEMGA--EVLIIGVSNPG--GYLEEQIATLVKKALSLGMDVIS 124 (350)
T ss_dssp SHHHHHHTTC--CEEEECCCSCC--HHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHhcCC--CEEEEEecCCC--CCCCHHHHHHHHHHHHcCCcEEe
Confidence 7777777666 99999995554 22555666655554 4666643
No 40
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=20.33 E-value=1e+02 Score=23.76 Aligned_cols=36 Identities=14% Similarity=0.225 Sum_probs=27.2
Q ss_pred HHHHHHhhCCCccEEEEecCCCCcCCCCCHHHHHHHHhh-ccceecC
Q psy14701 37 SLSLFLHLEPKLDVLIIGLGDFKFNHTKLIPVINEVRKH-CNVEVLP 82 (136)
Q Consensus 37 ~l~~l~~~~P~~EvlIiGTG~~~~~~~l~~~l~~~l~~~-I~vEvM~ 82 (136)
+++.+..++| |+||.+.+ .++..+.|++. |.+-+++
T Consensus 108 n~E~i~al~P--DLIi~~~~--------~~~~~~~L~~~gipvv~~~ 144 (335)
T 4hn9_A 108 NTEACVAATP--DVVFLPMK--------LKKTADTLESLGIKAVVVN 144 (335)
T ss_dssp CHHHHHHTCC--SEEEEEGG--------GHHHHHHHHHTTCCEEEEC
T ss_pred CHHHHHhcCC--CEEEEeCc--------chhHHHHHHHcCCCEEEEc
Confidence 5777788998 99887653 24778888888 8877775
No 41
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=20.29 E-value=53 Score=24.80 Aligned_cols=46 Identities=9% Similarity=0.008 Sum_probs=36.7
Q ss_pred cEEEEecCCCCcCCCCCHHHHHHHHhh-ccceecChHHHHHHHHHhhhc
Q psy14701 49 DVLIIGLGDFKFNHTKLIPVINEVRKH-CNVEVLPTERAIATFNFMVSE 96 (136)
Q Consensus 49 EvlIiGTG~~~~~~~l~~~l~~~l~~~-I~vEvM~T~aAcrTyN~L~sE 96 (136)
-+++-=||.... .-..++.+.|++. ..|.++=|++|++..+-+.-+
T Consensus 6 ~IllgvTGaiaa--~k~~~ll~~L~~~g~eV~vv~T~~A~~fi~~et~~ 52 (209)
T 3zqu_A 6 RITLAMTGASGA--QYGLRLLDCLVQEEREVHFLISKAAQLVMATETDV 52 (209)
T ss_dssp EEEEEECSSSCH--HHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHCSC
T ss_pred EEEEEEECHHHH--HHHHHHHHHHHHCCCEEEEEECccHHHHHHHHhCC
Confidence 466666888873 3567889999999 999999999999998876533
Done!