BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14703
(356 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 113/213 (53%), Gaps = 32/213 (15%)
Query: 151 YIKLVTDEVLLVDQRIVENAKKTYDVAGTTALIAILEGTRLIVANVGDSRGVMCDSKGNA 210
+ K + + + VD I E + G+T+++A++ T + VAN GDSR V+C K
Sbjct: 106 WKKALFNSFMRVDSEI-ETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGK-TP 163
Query: 211 IPLSFDHKPQQMRERKRIKEAGG-FIAFNGVWRVAGILATSRALGDYPLKDKKLVIADPD 269
+ LS DHKP + E RI+ AGG I +NG RV G+LA SR++GD LK VI DP+
Sbjct: 164 LALSVDHKPDRDDEAARIEAAGGKVIRWNGA-RVFGVLAMSRSIGDRYLKPS--VIPDPE 220
Query: 270 ILTFDLSDHKPQFLILASDGLWDIFSNEEAVNFIKQRL----------GEELF------- 312
+ + LILASDGLWD+ +NEE + ++R+ GE L
Sbjct: 221 VTSVRRVKED-DCLILASDGLWDVMTNEEVCDLARKRILLWHKKNAMAGEALLPAEKRGE 279
Query: 313 --------GAKSLTLQAYYKGSLDNITVIVINL 337
A+ L+ A KGS DNI+V+V++L
Sbjct: 280 GKDPAAMSAAEYLSKMALQKGSKDNISVVVVDL 312
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 18 LIAVFDGHGGEFAANFARDNLMTSLNDKVIELKKIIAQG 56
V+DGHGG AN+ R+ + +L +++++ K G
Sbjct: 61 FFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDG 99
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 115/215 (53%), Gaps = 35/215 (16%)
Query: 150 NYIKLVTDEVLLVDQRIVENAKKTYDVAGTTALIAILEGTRLIVANVGDSRGVMCDSKGN 209
+ K + + L VD I A +T G+T+++A++ + + VAN GDSR V+C K
Sbjct: 113 KWKKALFNSFLRVDSEIESVAPET---VGSTSVVAVVFPSHIFVANCGDSRAVLCRGK-T 168
Query: 210 AIPLSFDHKPQQMRERKRIKEAGG-FIAFNGVWRVAGILATSRALGDYPLKDKKLVIADP 268
A+PLS DHKP + E RI+ AGG I +NG RV G+LA SR++GD LK +I DP
Sbjct: 169 ALPLSVDHKPDREDEAARIEAAGGKVIQWNGA-RVFGVLAMSRSIGDRYLKPS--IIPDP 225
Query: 269 DILTFDLSDHKPQFLILASDGLWDIFSNEEAVNFIKQR----------------LGEE-- 310
++ LILASDG+WD+ ++EEA ++R L +E
Sbjct: 226 EVTAVKRVKED-DCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERR 284
Query: 311 --------LFGAKSLTLQAYYKGSLDNITVIVINL 337
+ A+ L+ A +GS DNI+V+V++L
Sbjct: 285 KEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDL 319
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 14 TGVSLIAVFDGHGGEFAANFARDNLMTSLNDKVIELKKIIAQG 56
+ V+DGHGG AN+ R+ + +L +++ + K ++ G
Sbjct: 65 SAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDG 107
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 114/215 (53%), Gaps = 35/215 (16%)
Query: 150 NYIKLVTDEVLLVDQRIVENAKKTYDVAGTTALIAILEGTRLIVANVGDSRGVMCDSKGN 209
+ K + + L VD I A +T G+T+++A++ + + VAN GDSR V+C K
Sbjct: 98 KWKKALFNSFLRVDSEIESVAPET---VGSTSVVAVVFPSHIFVANCGDSRAVLCRGK-T 153
Query: 210 AIPLSFDHKPQQMRERKRIKEAGG-FIAFNGVWRVAGILATSRALGDYPLKDKKLVIADP 268
A+PLS DHKP + E RI+ AGG I +NG RV G+LA SR++GD LK +I DP
Sbjct: 154 ALPLSVDHKPDREDEAARIEAAGGKVIQWNGA-RVFGVLAMSRSIGDRYLKPS--IIPDP 210
Query: 269 DILTFDLSDHKPQFLILASDGLWDIFSNEEAVNFIKQRL-----------GEELFG---- 313
++ LILASDG+WD+ ++EEA ++R+ G L
Sbjct: 211 EVTAVKRVKED-DCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERR 269
Query: 314 -----------AKSLTLQAYYKGSLDNITVIVINL 337
A+ L+ A +GS DNI+V+V++L
Sbjct: 270 KEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDL 304
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 25/43 (58%)
Query: 14 TGVSLIAVFDGHGGEFAANFARDNLMTSLNDKVIELKKIIAQG 56
+ V+DGHGG AN+ R+ + +L +++ + K +++ G
Sbjct: 50 SAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDG 92
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 115/215 (53%), Gaps = 35/215 (16%)
Query: 150 NYIKLVTDEVLLVDQRIVENAKKTYDVAGTTALIAILEGTRLIVANVGDSRGVMCDSKGN 209
+ K + + L VD I A +T G+T+++A++ + + VAN GDSR V+C K
Sbjct: 101 KWKKALFNSFLRVDSEIESVAPET---VGSTSVVAVVFPSHIFVANCGDSRAVLCRGK-T 156
Query: 210 AIPLSFDHKPQQMRERKRIKEAGG-FIAFNGVWRVAGILATSRALGDYPLKDKKLVIADP 268
A+PLS DHKP + E RI+ AGG I +NG RV G+LA SR++GD LK +I DP
Sbjct: 157 ALPLSVDHKPDREDEAARIEAAGGKVIQWNGA-RVFGVLAMSRSIGDRYLKPS--IIPDP 213
Query: 269 DILTFDLSDHKPQFLILASDGLWDIFSNEEAVNFIKQR----------------LGEE-- 310
++ LILASDG+WD+ ++EEA ++R L +E
Sbjct: 214 EVTAVKRVKED-DCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGDASLLADERR 272
Query: 311 --------LFGAKSLTLQAYYKGSLDNITVIVINL 337
+ A+ L+ A +GS DNI+V+V++L
Sbjct: 273 KEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDL 307
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 14 TGVSLIAVFDGHGGEFAANFARDNLMTSLNDKVIELKKIIAQG 56
+ V+DGHGG AN+ R+ + +L +++ + K ++ G
Sbjct: 53 SAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDG 95
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 106/184 (57%), Gaps = 26/184 (14%)
Query: 175 DVAGTTALIAILEGTRLIVANVGDSRGVMCDSKGNAIPLSFDHKPQQMRERKRIKEAGG- 233
+ G+TA++A++ + ++V+N GDSR V+ K A+PLS DHKP + E RI+ AGG
Sbjct: 152 ETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK-EAMPLSVDHKPDREDEYARIENAGGK 210
Query: 234 FIAFNGVWRVAGILATSRALGDYPLKDKKLVIADPDILTFDLSDHKPQFLILASDGLWDI 293
I + G RV G+LA SR++GD LK VI +P++ TF + + LILASDGLWD+
Sbjct: 211 VIQWQGA-RVFGVLAMSRSIGDRYLK--PYVIPEPEV-TFMPRSREDECLILASDGLWDV 266
Query: 294 FSNEEAVNFIKQR------------LGEELFG--------AKSLTLQAYYKGSLDNITVI 333
+N+E ++R L E G A L++ A KGS DNI++I
Sbjct: 267 MNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISII 326
Query: 334 VINL 337
VI+L
Sbjct: 327 VIDL 330
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 19/69 (27%)
Query: 1 MEDRFVINENI----------DDTGVS---------LIAVFDGHGGEFAANFARDNLMTS 41
MED F ++ + D G+S V+DGHGG A++ RD L +
Sbjct: 31 MEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFA 90
Query: 42 LNDKVIELK 50
L +++ +K
Sbjct: 91 LAEEIERIK 99
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 106/184 (57%), Gaps = 26/184 (14%)
Query: 175 DVAGTTALIAILEGTRLIVANVGDSRGVMCDSKGNAIPLSFDHKPQQMRERKRIKEAGG- 233
+ G+TA++A++ + ++V+N GDSR V+ K A+PLS DHKP + E RI+ AGG
Sbjct: 153 ETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK-EAMPLSVDHKPDREDEYARIENAGGK 211
Query: 234 FIAFNGVWRVAGILATSRALGDYPLKDKKLVIADPDILTFDLSDHKPQFLILASDGLWDI 293
I + G RV G+LA SR++GD LK VI +P++ TF + + LILASDGLWD+
Sbjct: 212 VIQWQGA-RVFGVLAMSRSIGDRYLK--PYVIPEPEV-TFMPRSREDECLILASDGLWDV 267
Query: 294 FSNEEAVNFIKQR------------LGEELFG--------AKSLTLQAYYKGSLDNITVI 333
+N+E ++R L E G A L++ A KGS DNI++I
Sbjct: 268 MNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISII 327
Query: 334 VINL 337
VI+L
Sbjct: 328 VIDL 331
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 19/69 (27%)
Query: 1 MEDRFVINENI----------DDTGVS---------LIAVFDGHGGEFAANFARDNLMTS 41
MED F ++ + D G+S V+DGHGG A++ RD L +
Sbjct: 32 MEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFA 91
Query: 42 LNDKVIELK 50
L +++ +K
Sbjct: 92 LAEEIERIK 100
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 106/184 (57%), Gaps = 26/184 (14%)
Query: 175 DVAGTTALIAILEGTRLIVANVGDSRGVMCDSKGNAIPLSFDHKPQQMRERKRIKEAGG- 233
+ G+TA++A++ + ++V+N GDSR V+ K A+PLS DHKP + E RI+ AGG
Sbjct: 162 ETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK-EAMPLSVDHKPDREDEYARIENAGGK 220
Query: 234 FIAFNGVWRVAGILATSRALGDYPLKDKKLVIADPDILTFDLSDHKPQFLILASDGLWDI 293
I + G RV G+LA SR++GD LK VI +P++ TF + + LILASDGLWD+
Sbjct: 221 VIQWQGA-RVFGVLAMSRSIGDRYLK--PYVIPEPEV-TFMPRSREDECLILASDGLWDV 276
Query: 294 FSNEEAVNFIKQR------------LGEELFG--------AKSLTLQAYYKGSLDNITVI 333
+N+E ++R L E G A L++ A KGS DNI++I
Sbjct: 277 MNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISII 336
Query: 334 VINL 337
VI+L
Sbjct: 337 VIDL 340
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 19/69 (27%)
Query: 1 MEDRFVINENI----------DDTGVS---------LIAVFDGHGGEFAANFARDNLMTS 41
MED F ++ + D G+S V+DGHGG A++ RD L +
Sbjct: 41 MEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFA 100
Query: 42 LNDKVIELK 50
L +++ +K
Sbjct: 101 LAEEIERIK 109
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 106/184 (57%), Gaps = 26/184 (14%)
Query: 175 DVAGTTALIAILEGTRLIVANVGDSRGVMCDSKGNAIPLSFDHKPQQMRERKRIKEAGG- 233
+ G+TA++A++ + ++V+N GDSR V+ K A+PLS DHKP + E RI+ AGG
Sbjct: 155 ETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK-EAMPLSVDHKPDREDEYARIENAGGK 213
Query: 234 FIAFNGVWRVAGILATSRALGDYPLKDKKLVIADPDILTFDLSDHKPQFLILASDGLWDI 293
I + G RV G+LA SR++GD LK VI +P++ TF + + LILASDGLWD+
Sbjct: 214 VIQWQGA-RVFGVLAMSRSIGDRYLK--PYVIPEPEV-TFMPRSREDECLILASDGLWDV 269
Query: 294 FSNEEAVNFIKQR------------LGEELFG--------AKSLTLQAYYKGSLDNITVI 333
+N+E ++R L E G A L++ A KGS DNI++I
Sbjct: 270 MNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISII 329
Query: 334 VINL 337
VI+L
Sbjct: 330 VIDL 333
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 19/69 (27%)
Query: 1 MEDRFVINENI----------DDTGVS---------LIAVFDGHGGEFAANFARDNLMTS 41
MED F ++ + D G+S V+DGHGG A++ RD L +
Sbjct: 34 MEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFA 93
Query: 42 LNDKVIELK 50
L +++ +K
Sbjct: 94 LAEEIERIK 102
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 106/184 (57%), Gaps = 26/184 (14%)
Query: 175 DVAGTTALIAILEGTRLIVANVGDSRGVMCDSKGNAIPLSFDHKPQQMRERKRIKEAGG- 233
+ G+TA++A++ + ++V+N GDSR V+ K A+PLS DHKP + E RI+ AGG
Sbjct: 138 ETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK-EAMPLSVDHKPDREDEYARIENAGGK 196
Query: 234 FIAFNGVWRVAGILATSRALGDYPLKDKKLVIADPDILTFDLSDHKPQFLILASDGLWDI 293
I + G RV G+LA SR++GD LK VI +P++ TF + + LILASDGLWD+
Sbjct: 197 VIQWQGA-RVFGVLAMSRSIGDRYLK--PYVIPEPEV-TFMPRSREDECLILASDGLWDV 252
Query: 294 FSNEEAVNFIKQR------------LGEELFG--------AKSLTLQAYYKGSLDNITVI 333
+N+E ++R L E G A L++ A KGS DNI++I
Sbjct: 253 MNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISII 312
Query: 334 VINL 337
VI+L
Sbjct: 313 VIDL 316
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 19/69 (27%)
Query: 1 MEDRFVINENI----------DDTGVS---------LIAVFDGHGGEFAANFARDNLMTS 41
MED F ++ + D G+S V+DGHGG A++ RD L +
Sbjct: 17 MEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFA 76
Query: 42 LNDKVIELK 50
L +++ +K
Sbjct: 77 LAEEIERIK 85
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 106/184 (57%), Gaps = 26/184 (14%)
Query: 175 DVAGTTALIAILEGTRLIVANVGDSRGVMCDSKGNAIPLSFDHKPQQMRERKRIKEAGG- 233
+ G+TA++A++ + ++V+N GDSR V+ K A+PLS DHKP + E RI+ AGG
Sbjct: 149 ETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK-EAMPLSVDHKPDREDEYARIENAGGK 207
Query: 234 FIAFNGVWRVAGILATSRALGDYPLKDKKLVIADPDILTFDLSDHKPQFLILASDGLWDI 293
I + G RV G+LA SR++GD LK VI +P++ TF + + LILASDGLWD+
Sbjct: 208 VIQWQGA-RVFGVLAMSRSIGDRYLK--PYVIPEPEV-TFMPRSREDECLILASDGLWDV 263
Query: 294 FSNEEAVNFIKQR------------LGEELFG--------AKSLTLQAYYKGSLDNITVI 333
+N+E ++R L E G A L++ A KGS DNI++I
Sbjct: 264 MNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISII 323
Query: 334 VINL 337
VI+L
Sbjct: 324 VIDL 327
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 19/69 (27%)
Query: 1 MEDRFVINENI----------DDTGVS---------LIAVFDGHGGEFAANFARDNLMTS 41
MED F ++ + D G+S V+DGHGG A++ RD L +
Sbjct: 28 MEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFA 87
Query: 42 LNDKVIELK 50
L +++ +K
Sbjct: 88 LAEEIERIK 96
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 102/187 (54%), Gaps = 18/187 (9%)
Query: 165 RIVENAKKTYDVAGTTALIAILEGTRLIVANVGDSRGVMCDSKGNAIPLSFDHKPQQMRE 224
R++ K D +G+TA+ ++ N GDSRG++C ++ + DHKP E
Sbjct: 113 RVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHF-FTQDHKPSNPLE 171
Query: 225 RKRIKEAGGFIAFNGVWRVAGILATSRALGDYPLK-------DKKLVIADPDILTFDLSD 277
++RI+ AGG + + RV G LA SRALGD+ K ++LV +P++ + S+
Sbjct: 172 KERIQNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSE 228
Query: 278 HKPQFLILASDGLWDIFSNEEAVNFIKQRLG-----EELFGAKSLTLQAYYKGSLDNITV 332
QF+ILA DG+WD+ NEE +F++ RL E++ + YKGS DN++V
Sbjct: 229 EDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKV--CNEVVDTCLYKGSRDNMSV 286
Query: 333 IVINLMN 339
I+I N
Sbjct: 287 ILICFPN 293
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 102/187 (54%), Gaps = 18/187 (9%)
Query: 165 RIVENAKKTYDVAGTTALIAILEGTRLIVANVGDSRGVMCDSKGNAIPLSFDHKPQQMRE 224
R++ K D +G+TA+ ++ N GDSRG++C ++ + DHKP E
Sbjct: 113 RVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHF-FTQDHKPSNPLE 171
Query: 225 RKRIKEAGGFIAFNGVWRVAGILATSRALGDYPLK-------DKKLVIADPDILTFDLSD 277
++RI+ AGG + + RV G LA SRALGD+ K ++LV +P++ + S+
Sbjct: 172 KERIQNAGGSVM---IQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSE 228
Query: 278 HKPQFLILASDGLWDIFSNEEAVNFIKQRLG-----EELFGAKSLTLQAYYKGSLDNITV 332
QF+ILA DG+WD+ NEE +F++ RL E++ + YKGS DN++V
Sbjct: 229 EDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKV--CNEVVDTCLYKGSRDNMSV 286
Query: 333 IVINLMN 339
I+I N
Sbjct: 287 ILICFPN 293
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 104/181 (57%), Gaps = 27/181 (14%)
Query: 177 AGTTALIAILEGTRLIVANVGDSRGVMCDSKGNAIPLSFDHKPQQMRERKRIKEAGGFIA 236
+G TA++A+L G L VAN GDSR V+C G A+ +SFDHKP+ E +RI++AGG +
Sbjct: 130 SGCTAVVALLHGKDLYVANAGDSRCVVC-RNGKALEMSFDHKPEDTVEYQRIEKAGGRVT 188
Query: 237 FNGVWRVAGILATSRALGDYPLK-------DKKLVIADPDILTFDLSDHKPQFLILASDG 289
+G RV G L SRA+GD+ K +++++ A PDI + + +F++LA DG
Sbjct: 189 LDG--RVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGP-EDEFMVLACDG 245
Query: 290 LWDIFSNEEAVNFIKQRLG----------EELFGAKSLTLQAYYKG---SLDNITVIVIN 336
+W+ ++E+ V F+++R+ EELF L + +G DN+T I++
Sbjct: 246 IWNFMTSEQVVQFVQERINKPGMKLSKICEELF---DHCLAPHTRGDGTGCDNMTAIIVQ 302
Query: 337 L 337
Sbjct: 303 F 303
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 113/193 (58%), Gaps = 10/193 (5%)
Query: 150 NYIKLVTDEVLLVDQRIVENAKKTYD----VAGTTALIAIL-EGTRLIVANVGDSRGVMC 204
N L+T L +D+ +A+ + D +GTTA +A+L +G L+VA+VGDSR ++C
Sbjct: 184 NLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILC 243
Query: 205 DSKGNAIPLSFDHKPQQMRERKRIKEAGGFIAFN--GVWRVAGILATSRALGDYPLKDKK 262
KG + L+ DH P++ E++RIK+ GGF+A+N G V G LA +R++GD LK
Sbjct: 244 -RKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSG 302
Query: 263 LVIADPDILTFDLSDHKPQFLILASDGLWDIFSNEEAVNFIKQRLGEELFGAKSLTLQAY 322
VIA+P+ L FL+L +DG+ + +++E +F+ Q + A ++T QA
Sbjct: 303 -VIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQ-CHDPNEAAHAVTEQAI 360
Query: 323 YKGSLDNITVIVI 335
G+ DN T +V+
Sbjct: 361 QYGTEDNSTAVVV 373
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 2 EDRFVINENIDDTGVSLIAVFDGHGGEFAANFARDNLMTSLND 44
EDRF + D+ V AV+DGHGG AA+F ++ + D
Sbjct: 137 EDRFDFAQLTDE--VLYFAVYDGHGGPAAADFCHTHMEKCIMD 177
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 113/193 (58%), Gaps = 10/193 (5%)
Query: 150 NYIKLVTDEVLLVDQRIVENAKKTYD----VAGTTALIAIL-EGTRLIVANVGDSRGVMC 204
N L+T L +D+ +A+ + D +GTTA +A+L +G L+VA+VGDSR ++C
Sbjct: 70 NLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILC 129
Query: 205 DSKGNAIPLSFDHKPQQMRERKRIKEAGGFIAFN--GVWRVAGILATSRALGDYPLKDKK 262
KG + L+ DH P++ E++RIK+ GGF+A+N G V G LA +R++GD LK
Sbjct: 130 -RKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSG 188
Query: 263 LVIADPDILTFDLSDHKPQFLILASDGLWDIFSNEEAVNFIKQRLGEELFGAKSLTLQAY 322
VIA+P+ L FL+L +DG+ + +++E +F+ Q + A ++T QA
Sbjct: 189 -VIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQ-CHDPNEAAHAVTEQAI 246
Query: 323 YKGSLDNITVIVI 335
G+ DN T +V+
Sbjct: 247 QYGTEDNSTAVVV 259
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 2 EDRFVINENIDDTGVSLIAVFDGHGGEFAANFARDNLMTSLND 44
EDRF + D+ V AV+DGHGG AA+F ++ + D
Sbjct: 23 EDRFDFAQLTDE--VLYFAVYDGHGGPAAADFCHTHMEKCIMD 63
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 97/175 (55%), Gaps = 15/175 (8%)
Query: 175 DVAGTTALIAILEGTRLIVANVGDSRGVMCDSKGNAIPLSFDHKPQQMRERKRIKEAGGF 234
D +G+TA+ ++ + N GDSR V+ G + DHKP RE++RI+ AGG
Sbjct: 130 DRSGSTAVGVMISPKHIYFINCGDSRAVL-YRNGQVCFSTQDHKPCNPREKERIQNAGGS 188
Query: 235 IAFNGVWRVAGILATSRALGDYPLK-------DKKLVIADPDILTFDLSDHKPQFLILAS 287
+ + RV G LA SRALGDY K ++LV +P++ L + +F+ILA
Sbjct: 189 VM---IQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEI-LRAEEDEFIILAX 244
Query: 288 DGLWDIFSNEEAVNFIKQRL--GEELFGAKSLTLQ-AYYKGSLDNITVIVINLMN 339
DG+WD+ SNEE ++K RL ++L + + +KGS DN++++++ N
Sbjct: 245 DGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSN 299
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 185 ILEGTRLIVA-NVGDSRGVMCDSKGNAIPLSFDHKPQQMRERKRIKEAGGFIAFNGVWRV 243
I G+ L+ A N+GDSR + S G LS DHKP E RI++AGG + V RV
Sbjct: 168 IPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFDVPRV 227
Query: 244 AGILATSRALGDYPLK-------DKKLVIADPDILTF 273
G+LA SRA GD K +++ VIA PD+ F
Sbjct: 228 DGVLALSRAFGDSDFKXNPNLPPEEQKVIAVPDVRQF 264
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 43/171 (25%)
Query: 177 AGTTALIAILEGTRLIVANVGDSRGVMC----DSKGNAIPLSFDHKPQQMRERKRIK--- 229
+G TA +A ++G L VAN GDSR ++ D +A+ LS DH Q RE +R+K
Sbjct: 199 SGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEH 258
Query: 230 ---EAGGFIAFNGVWRVAGILATSRALGDYPLK-----DKKLVIADPDILT--------- 272
EA + + R+ G+L RA GD K K+++ + PD L
Sbjct: 259 PKNEAKSVVKQD---RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIP 315
Query: 273 ------------FDLSDH--KPQ--FLILASDGLWDIFSNEEAVNFIKQRL 307
+++ H +PQ FL+LA+DGLW+ ++ V + + L
Sbjct: 316 PNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYL 366
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 43/171 (25%)
Query: 177 AGTTALIAILEGTRLIVANVGDSRGVMC----DSKGNAIPLSFDHKPQQMRERKRIK--- 229
+G TA +A ++G L VAN GDSR ++ D +A+ LS DH Q RE +R+K
Sbjct: 199 SGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREVERLKLEH 258
Query: 230 ---EAGGFIAFNGVWRVAGILATSRALGDYPLK-----DKKLVIADPDILT--------- 272
EA + + R+ G+L RA GD K K+++ + PD L
Sbjct: 259 PKNEAKSVVKQD---RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIP 315
Query: 273 ------------FDLSDH--KPQ--FLILASDGLWDIFSNEEAVNFIKQRL 307
+++ H +PQ FL+LA+DGLW+ ++ V + + L
Sbjct: 316 PNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYL 366
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 24/191 (12%)
Query: 175 DVAGTTALIAILEGTRLIVANVGDSR---GVMCDSKGNAIPLSFDHKPQQMRERKRIKEA 231
D A +T++ A+L + V ++GDSR GV + N L+ DHKP E+ RI
Sbjct: 134 DYASSTSVTAVLAKGFVAVGHLGDSRIAXGVETPNGLNCEFLTVDHKPDXPHEKLRIXRN 193
Query: 232 GGFIAF-----NGVWRVAGILATSRALGDYPLK-DKKLVIADPDILTFDLSDHK------ 279
GG + + N + G + ++ G+ P + D+ + LS+
Sbjct: 194 GGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVR 253
Query: 280 --PQF--LILASDGLWDIFSNEEAVNFIKQRLGEELFGAKSL---TL--QAYYKGSLDNI 330
PQ ILA+DGLWD+ S +AV Q E A++L TL Q S DNI
Sbjct: 254 VTPQHRVXILATDGLWDVXSAAQAVEIAXQARQEGRNPAQALVEXTLAEQQSRNQSADNI 313
Query: 331 TVIVINLMNYD 341
T + D
Sbjct: 314 TAXTVFFKKTD 324
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|B Chain B, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|C Chain C, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|D Chain D, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
Length = 377
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 193 VANVGDSRGVMCDSKGNAIPLSFDHKPQQMRERKRIKEAGG-FIAFNGVWRVAGILATSR 251
VA++G+SR V+ + AI LS H +ER R++ AGG F NG + G++ +R
Sbjct: 170 VASLGNSRCVLKSGR-TAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPXTR 228
Query: 252 ALGDYPLK-------DKKLVIADPDILTF 273
A G + K + LV A PD+ TF
Sbjct: 229 AFGSFDFKKGGQGKLQQDLVSAVPDVTTF 257
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Query: 177 AGTTALIAILEGTRLIVANVGDSRGVMCDSKGNAI---PLSFDHKPQQMRERKRIKEAGG 233
G A++A+L +L VANVG +R ++C S + + L+ DH + E R+ + G
Sbjct: 147 GGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLG- 205
Query: 234 FIAFNGVWRVAGILA---TSRALGDYPLK------------DKKLVIADPDILTFDLSDH 278
G + GI+ ++R +GDY +K K +IA+P+I D
Sbjct: 206 --LDAGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDG 263
Query: 279 KPQFLILASDGLW 291
FL+L S+GL+
Sbjct: 264 VTGFLVLMSEGLY 276
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Query: 177 AGTTALIAILEGTRLIVANVGDSRGVMCDSKGNAI---PLSFDHKPQQMRERKRIKEAGG 233
G A++A+L +L VANVG +R ++C S + + L+ DH + E R+ + G
Sbjct: 166 GGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLG- 224
Query: 234 FIAFNGVWRVAGILA---TSRALGDYPLK------------DKKLVIADPDILTFDLSDH 278
G + GI+ ++R +GDY +K K +IA+P+I D
Sbjct: 225 --LDAGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDG 282
Query: 279 KPQFLILASDGLW 291
FL+L S+GL+
Sbjct: 283 VTGFLVLMSEGLY 295
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Query: 177 AGTTALIAILEGTRLIVANVGDSRGVMCDSKGNAI---PLSFDHKPQQMRERKRIKEAGG 233
G A++A+L +L VANVG +R ++C S + + L+ DH + E R+ + G
Sbjct: 164 GGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLG- 222
Query: 234 FIAFNGVWRVAGILA---TSRALGDYPLK------------DKKLVIADPDILTFDLSDH 278
G + GI+ ++R +GDY +K K +IA+P+I D
Sbjct: 223 --LDAGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDG 280
Query: 279 KPQFLILASDGLW 291
FL+L S+GL+
Sbjct: 281 VTGFLVLMSEGLY 293
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 22/131 (16%)
Query: 178 GTTALIAILEGTRLIVANVGDSRGVMCDSKGN----AIPLSFDHKPQQMRERKRIKEAGG 233
G++A++A++ + L + N+G+ R ++C + + LS DH E R+ G
Sbjct: 154 GSSAVLALIHRSHLYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLGL 213
Query: 234 FIA-FNGVWRVAGILATSRALGDY----PLKDKKL--------VIADPDILTFDLSDHKP 280
F GV L ++R +G+Y KD VI +P+I+
Sbjct: 214 MAQNFEGVP-----LYSTRCIGNYLGKAGYKDCNFLSSATAEPVIFEPEIVGGIQITPAC 268
Query: 281 QFLILASDGLW 291
+FL+L S GL
Sbjct: 269 RFLVLMSSGLC 279
>pdb|2PK0|A Chain A, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|B Chain B, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|C Chain C, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
pdb|2PK0|D Chain D, Structure Of The S. Agalactiae Serine/threonine
Phosphatase At 2.65 Resolution
Length = 250
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 31/169 (18%)
Query: 174 YDVAGTTALIAILEGTRLIVANVGDSR-GVMCDSKGNAIPLSFDHKPQQMRERKRIKEAG 232
Y GTT + G +I A+VGDSR G++ +G L+ DH + +AG
Sbjct: 99 YKGMGTTIEAVAIVGDNIIFAHVGDSRIGIV--RQGEYHLLTSDHSL-----VNELVKAG 151
Query: 233 GFIAFNGVWRVAGILATSRALGDYPLKD---KKLVIADPDILTFDLSDH---KPQFLILA 286
T +P K+ + + A+P + DL H + +L++
Sbjct: 152 QL--------------TEEEAASHPQKNIITQSIGQANP--VEPDLGVHLLEEGDYLVVN 195
Query: 287 SDGLWDIFSNEEAVNFIKQRLGEELFGAKSLTLQAYYKGSLDNITVIVI 335
SDGL ++ SN + + Q + +TL A ++G LDNITV ++
Sbjct: 196 SDGLTNMLSNADIATVLTQEKTLDDKNQDLITL-ANHRGGLDNITVALV 243
>pdb|2CVI|A Chain A, Crystal Structure Of Hypothetical Protein Phs023 From
Pyrococcus Horikoshii
pdb|2CVI|B Chain B, Crystal Structure Of Hypothetical Protein Phs023 From
Pyrococcus Horikoshii
Length = 83
Score = 28.1 bits (61), Expect = 7.0, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 152 IKLVTDEVLLVDQRIVENAKKTYDVAGTTALIAILE 187
+K+ TD + +DQ I E +K ++ T+ +IAILE
Sbjct: 42 VKVETDTLKDLDQFITEKIRKMPEIQMTSTMIAILE 77
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,801,206
Number of Sequences: 62578
Number of extensions: 320964
Number of successful extensions: 817
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 699
Number of HSP's gapped (non-prelim): 59
length of query: 356
length of database: 14,973,337
effective HSP length: 100
effective length of query: 256
effective length of database: 8,715,537
effective search space: 2231177472
effective search space used: 2231177472
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)