Query psy14704
Match_columns 162
No_of_seqs 202 out of 1071
Neff 6.7
Searched_HMMs 46136
Date Fri Aug 16 18:30:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14704.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14704hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0424 Maf Nucleotide-binding 100.0 1.6E-53 3.4E-58 336.1 21.5 144 11-162 2-146 (193)
2 TIGR00172 maf MAF protein. Thi 100.0 2.4E-53 5.1E-58 334.2 21.4 143 11-162 2-144 (183)
3 PRK04056 Maf-like protein; Rev 100.0 5.7E-53 1.2E-57 331.2 21.2 142 13-162 1-142 (180)
4 PRK00032 Maf-like protein; Rev 100.0 1.2E-52 2.7E-57 331.8 21.2 142 13-162 3-144 (190)
5 PRK14368 Maf-like protein; Pro 100.0 1.3E-52 2.8E-57 332.3 21.3 144 10-162 3-148 (193)
6 PRK00884 Maf-like protein; Rev 100.0 1.4E-52 2.9E-57 332.4 21.4 142 12-162 2-145 (194)
7 PRK00648 Maf-like protein; Rev 100.0 2.8E-52 6E-57 330.1 21.5 144 11-162 2-146 (191)
8 PRK00078 Maf-like protein; Rev 100.0 3.4E-52 7.3E-57 329.8 21.1 144 12-162 1-147 (192)
9 PRK14367 Maf-like protein; Pro 100.0 4.1E-52 8.9E-57 331.5 21.4 146 13-162 3-150 (202)
10 PRK14362 Maf-like protein; Pro 100.0 4.6E-52 1E-56 332.2 21.3 145 10-162 10-155 (207)
11 PRK02141 Maf-like protein; Rev 100.0 5.4E-52 1.2E-56 331.8 21.3 146 11-162 8-155 (207)
12 PRK14366 Maf-like protein; Pro 100.0 6.1E-52 1.3E-56 328.9 21.3 144 10-162 3-148 (195)
13 PRK00148 Maf-like protein; Rev 100.0 6.5E-52 1.4E-56 328.6 21.2 142 12-162 1-144 (194)
14 PRK14361 Maf-like protein; Pro 100.0 8.7E-52 1.9E-56 326.2 20.3 139 14-162 1-139 (187)
15 PRK04694 Maf-like protein; Rev 100.0 1.3E-51 2.8E-56 326.0 21.0 145 13-162 1-146 (190)
16 PRK00234 Maf-like protein; Rev 100.0 1.6E-51 3.4E-56 326.0 21.4 141 13-162 3-145 (192)
17 PRK14363 Maf-like protein; Pro 100.0 1.6E-51 3.4E-56 328.4 20.7 142 12-162 1-142 (204)
18 PRK14364 Maf-like protein; Pro 100.0 1.6E-51 3.5E-56 323.3 20.2 138 16-162 1-138 (181)
19 PRK04425 Maf-like protein; Rev 100.0 5.1E-51 1.1E-55 323.9 21.5 143 11-162 4-149 (196)
20 PRK01526 Maf-like protein; Rev 100.0 5.2E-51 1.1E-55 325.8 21.5 145 10-162 6-155 (205)
21 cd00555 Maf Nucleotide binding 100.0 4.3E-51 9.4E-56 320.6 20.3 141 14-162 1-142 (180)
22 PRK01441 Maf-like protein; Rev 100.0 7.7E-51 1.7E-55 325.3 21.6 150 9-162 2-154 (207)
23 PRK01839 Maf-like protein; Rev 100.0 1E-50 2.2E-55 325.0 21.4 147 12-162 10-164 (209)
24 PRK02478 Maf-like protein; Rev 100.0 1.2E-50 2.7E-55 322.4 21.3 143 11-162 2-153 (199)
25 PRK14365 Maf-like protein; Pro 100.0 1.3E-50 2.8E-55 321.9 20.7 141 13-162 3-146 (197)
26 PF02545 Maf: Maf-like protein 100.0 6.9E-51 1.5E-55 323.0 16.8 144 12-162 1-147 (195)
27 KOG1509|consensus 100.0 8.1E-42 1.7E-46 267.6 17.1 157 4-162 2-164 (209)
28 cd00985 Maf_Ham1 Maf_Ham1. Maf 100.0 8.5E-33 1.9E-37 205.4 17.9 121 14-144 1-123 (131)
29 cd00515 HAM1 NTPase/HAM1. Thi 96.7 0.08 1.7E-06 41.6 13.1 101 14-131 1-120 (183)
30 PRK14824 putative deoxyribonuc 96.5 0.13 2.9E-06 41.1 13.3 102 13-131 2-132 (201)
31 PRK14821 putative deoxyribonuc 96.5 0.21 4.7E-06 39.3 14.1 102 12-131 1-117 (184)
32 PRK14823 putative deoxyribonuc 96.4 0.21 4.5E-06 39.7 13.6 101 13-130 2-124 (191)
33 COG0127 Xanthosine triphosphat 95.8 0.63 1.4E-05 37.2 13.7 109 12-132 2-127 (194)
34 PF01725 Ham1p_like: Ham1 fami 95.6 0.3 6.6E-06 38.5 11.2 102 14-132 1-126 (189)
35 PRK14822 nucleoside-triphospha 95.5 0.97 2.1E-05 36.1 14.5 105 13-130 3-128 (200)
36 PRK00120 dITP/XTP pyrophosphat 95.5 0.98 2.1E-05 36.0 14.2 105 12-131 1-127 (196)
37 PRK02491 putative deoxyribonuc 95.3 0.53 1.2E-05 40.5 12.6 104 11-130 127-255 (328)
38 PRK14825 putative deoxyribonuc 93.7 2.9 6.3E-05 33.4 13.2 105 13-131 3-129 (199)
39 TIGR00042 non-canonical purine 93.7 2.8 6E-05 33.0 13.1 104 13-131 1-119 (184)
40 PRK14826 putative deoxyribonuc 91.0 4.9 0.00011 32.6 10.9 108 10-129 7-143 (222)
41 COG4090 Uncharacterized protei 67.8 11 0.00024 28.5 4.3 42 85-129 84-126 (154)
42 PF09897 DUF2124: Uncharacteri 64.0 6.3 0.00014 30.2 2.4 40 87-129 81-121 (147)
43 COG0181 HemC Porphobilinogen d 61.1 6.4 0.00014 33.6 2.2 113 14-131 121-253 (307)
44 PF01379 Porphobil_deam: Porph 58.8 8.6 0.00019 31.2 2.5 26 13-38 120-145 (215)
45 COG0041 PurE Phosphoribosylcar 58.8 13 0.00028 28.8 3.3 27 12-38 5-36 (162)
46 cd00494 HMBS Hydroxymethylbila 56.5 11 0.00025 31.9 3.0 33 14-47 118-152 (292)
47 PRK00072 hemC porphobilinogen 54.1 13 0.00029 31.5 3.0 33 14-47 122-156 (295)
48 COG2425 Uncharacterized protei 52.8 53 0.0012 29.5 6.7 57 54-116 288-344 (437)
49 cd04911 ACT_AKiii-YclM-BS_1 AC 51.4 14 0.00031 25.0 2.3 18 25-42 23-40 (76)
50 PRK13843 conjugal transfer pro 49.9 24 0.00053 28.4 3.7 26 93-118 39-66 (207)
51 TIGR00212 hemC porphobilinogen 48.0 18 0.0004 30.7 2.9 32 14-46 118-151 (292)
52 PRK01066 porphobilinogen deami 46.9 19 0.00041 29.6 2.7 33 13-46 132-166 (231)
53 PF00107 ADH_zinc_N: Zinc-bind 46.9 26 0.00056 24.5 3.2 24 11-34 14-37 (130)
54 PRK07143 hypothetical protein; 46.5 50 0.0011 27.7 5.3 94 21-160 68-163 (279)
55 PLN02691 porphobilinogen deami 44.4 22 0.00048 30.9 2.9 34 13-47 164-199 (351)
56 PF07131 DUF1382: Protein of u 38.6 18 0.00039 23.5 1.1 20 25-45 17-36 (61)
57 PF08373 RAP: RAP domain; Int 38.4 24 0.00052 21.7 1.7 21 18-38 18-38 (58)
58 PRK06372 translation initiatio 38.0 2.3E+02 0.0051 23.4 9.3 93 18-124 94-193 (253)
59 TIGR00511 ribulose_e2b2 ribose 37.6 1.4E+02 0.003 25.2 6.6 80 29-125 137-226 (301)
60 PF06690 DUF1188: Protein of u 37.1 62 0.0013 26.9 4.3 34 54-87 17-50 (252)
61 PRK08535 translation initiatio 37.0 1.3E+02 0.0029 25.4 6.5 79 30-125 143-231 (310)
62 COG5552 Uncharacterized conser 36.8 26 0.00056 24.0 1.7 17 104-120 21-37 (88)
63 TIGR00315 cdhB CO dehydrogenas 36.3 60 0.0013 25.1 3.9 59 86-158 100-158 (162)
64 PRK08238 hypothetical protein; 35.9 1.4E+02 0.0031 26.9 6.8 30 10-40 87-119 (479)
65 COG4186 Predicted phosphoester 33.5 59 0.0013 25.6 3.4 38 84-122 42-80 (186)
66 PRK12677 xylose isomerase; Pro 33.4 1.8E+02 0.004 25.4 6.9 77 24-109 73-153 (384)
67 TIGR00083 ribF riboflavin kina 33.1 67 0.0014 27.0 4.0 39 19-63 55-93 (288)
68 PRK08335 translation initiatio 32.9 2.3E+02 0.0051 23.7 7.2 79 29-124 131-219 (275)
69 COG1094 Predicted RNA-binding 32.8 87 0.0019 25.1 4.4 34 81-119 133-167 (194)
70 cd06532 Glyco_transf_25 Glycos 32.4 1.9E+02 0.0041 20.7 9.2 98 14-116 5-119 (128)
71 PF13419 HAD_2: Haloacid dehal 32.1 72 0.0016 22.7 3.7 29 5-33 85-117 (176)
72 cd02064 FAD_synthetase_N FAD s 32.0 84 0.0018 24.1 4.2 38 19-62 57-94 (180)
73 COG4274 Uncharacterized conser 30.6 37 0.00081 24.4 1.8 61 96-157 24-101 (104)
74 PF12585 DUF3759: Protein of u 30.6 30 0.00065 24.5 1.3 20 98-117 39-58 (93)
75 COG1926 Predicted phosphoribos 30.4 97 0.0021 25.3 4.3 94 56-158 92-210 (220)
76 TIGR01664 DNA-3'-Pase DNA 3'-p 30.1 1.7E+02 0.0037 22.1 5.6 36 5-40 50-102 (166)
77 KOG3332|consensus 29.6 1.3E+02 0.0029 24.8 5.0 57 19-95 82-145 (247)
78 PF09082 DUF1922: Domain of un 29.0 63 0.0014 21.5 2.6 28 89-116 28-55 (68)
79 COG4126 Hydantoin racemase [Am 28.5 1.8E+02 0.0039 23.9 5.6 55 25-89 127-184 (230)
80 PRK11590 hypothetical protein; 28.1 51 0.0011 25.7 2.4 32 11-42 112-147 (211)
81 KOG1252|consensus 27.4 2.7E+02 0.0059 24.4 6.8 90 5-124 121-219 (362)
82 COG0807 RibA GTP cyclohydrolas 27.0 2.6E+02 0.0056 22.3 6.2 39 4-42 134-173 (193)
83 cd03054 GST_N_Metaxin GST_N fa 26.9 95 0.0021 19.4 3.2 30 13-42 9-41 (72)
84 COG4017 Uncharacterized protei 26.6 87 0.0019 25.6 3.4 34 54-87 20-53 (254)
85 cd03028 GRX_PICOT_like Glutare 26.5 1.5E+02 0.0033 19.8 4.3 31 7-37 3-43 (90)
86 PRK05627 bifunctional riboflav 26.4 1.1E+02 0.0024 25.8 4.3 35 21-61 73-107 (305)
87 TIGR01548 HAD-SF-IA-hyp1 haloa 26.1 2.9E+02 0.0062 20.9 6.3 23 11-33 122-146 (197)
88 TIGR00524 eIF-2B_rel eIF-2B al 26.1 1.7E+02 0.0037 24.7 5.4 85 29-124 148-239 (303)
89 PF01408 GFO_IDH_MocA: Oxidore 24.4 41 0.00089 23.2 1.1 20 96-115 89-110 (120)
90 PF04405 ScdA_N: Domain of Unk 24.1 35 0.00076 21.6 0.6 21 17-37 9-29 (56)
91 TIGR00631 uvrb excinuclease AB 23.9 1E+02 0.0022 29.0 3.9 39 86-128 510-548 (655)
92 COG4073 Uncharacterized protei 23.4 34 0.00074 27.0 0.6 30 13-42 119-150 (198)
93 PRK05772 translation initiatio 23.2 2.8E+02 0.006 24.3 6.2 41 80-123 247-287 (363)
94 PF01008 IF-2B: Initiation fac 22.9 1.2E+02 0.0027 24.7 3.9 91 18-124 115-218 (282)
95 PRK09880 L-idonate 5-dehydroge 22.4 1.1E+02 0.0023 25.5 3.4 25 12-36 195-219 (343)
96 KOG1548|consensus 22.3 2.1E+02 0.0045 25.2 5.1 56 102-160 322-379 (382)
97 TIGR02199 rfaE_dom_II rfaE bif 22.3 3.3E+02 0.0071 20.1 6.4 60 21-119 65-125 (144)
98 PF06574 FAD_syn: FAD syntheta 22.2 99 0.0021 23.4 2.9 75 18-118 62-136 (157)
99 COG0637 Predicted phosphatase/ 22.1 92 0.002 24.6 2.9 35 5-39 94-134 (221)
100 cd01211 GAPCenA GAPCenA Phosph 21.8 3.2E+02 0.0068 20.4 5.4 50 95-144 11-74 (125)
101 KOG0181|consensus 21.6 61 0.0013 26.2 1.7 18 141-158 215-232 (233)
102 COG1158 Rho Transcription term 21.4 1.3E+02 0.0029 26.6 3.8 45 32-90 225-269 (422)
103 PRK06036 translation initiatio 21.3 1.4E+02 0.0031 25.8 4.0 41 80-124 227-267 (339)
104 TIGR02631 xylA_Arthro xylose i 21.1 4.3E+02 0.0094 23.0 7.0 77 24-109 74-154 (382)
105 cd00136 PDZ PDZ domain, also c 20.9 2E+02 0.0043 17.6 3.8 32 87-120 34-66 (70)
106 PRK05456 ATP-dependent proteas 20.7 90 0.0019 24.2 2.5 21 80-100 10-30 (172)
107 TIGR00505 ribA GTP cyclohydrol 20.7 1.4E+02 0.0031 23.3 3.6 31 4-34 132-162 (191)
108 KOG1466|consensus 20.6 2E+02 0.0044 24.4 4.6 24 81-105 200-223 (313)
109 PF08557 Lipid_DES: Sphingolip 20.6 60 0.0013 19.3 1.1 10 20-29 16-25 (39)
No 1
>COG0424 Maf Nucleotide-binding protein implicated in inhibition of septum formation [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.6e-53 Score=336.06 Aligned_cols=144 Identities=47% Similarity=0.711 Sum_probs=138.1
Q ss_pred CCcEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceE
Q psy14704 11 NLKIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTV 90 (162)
Q Consensus 11 ~~~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTv 90 (162)
+++|||||+||||++||+++|++|++++++|| |+..+.+ .|.+||+++|++||++|+.+++ ++.+|||||||
T Consensus 2 ~~~LiLAS~SPrR~elL~~~gi~f~~~~~~iD-E~~~~~~---~P~~~v~~LA~~KA~~va~~~~----~~~~VigaDtv 73 (193)
T COG0424 2 MPRLILASSSPRRRELLEQLGIPFEVIPSDID-EPLLKAE---EPREYVLRLAEEKARAVAARLP----PDALVIGADTV 73 (193)
T ss_pred CccEEEecCCHHHHHHHHHCCCCeEEecCCCC-CCcccCC---CHHHHHHHHHHHHHHHHHHhCC----CCCEEEecCeE
Confidence 56899999999999999999999999999999 9988887 7999999999999999999984 48999999999
Q ss_pred EeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCc-ceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 91 VSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDK-DSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 91 V~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~-~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
|++||+|+|||+|.+||++||+.|||++|+||||+||+++++ .++.+++|+|+|++||+++|++||++|||+
T Consensus 74 v~ldgrilgKP~~~~eA~~~L~~lSG~~h~v~T~v~li~~~~~~~~~~~~t~V~F~~ls~~~I~~Yv~sgepl 146 (193)
T COG0424 74 VVLDGRILGKPKDEEEAREMLRKLSGRTHQVYTGVALIDPGKRVQSEVEVTKVRFRTLSDEEIEAYVASGEPL 146 (193)
T ss_pred EEECCEEecCCCCHHHHHHHHHHhcCCeEEEEEEEEEEECCCeEEEEEEEEEEEEccCCHHHHHHHHHcCCcc
Confidence 999999999999999999999999999999999999999886 668999999999999999999999999996
No 2
>TIGR00172 maf MAF protein. This nonessential gene causes inhibition of septation when overexpressed. A member of the family is found in the Archaeon Pyrococcus horikoshii and another in the round worm Caenorhabditis elegans.
Probab=100.00 E-value=2.4e-53 Score=334.16 Aligned_cols=143 Identities=44% Similarity=0.662 Sum_probs=136.3
Q ss_pred CCcEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceE
Q psy14704 11 NLKIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTV 90 (162)
Q Consensus 11 ~~~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTv 90 (162)
+++|||||+||||++||+++|++|+++|++|| |+..+.. +|.+||.++|.+||++|++++ ++.+|||||||
T Consensus 2 ~~~lILAS~SprR~elL~~~g~~f~v~~~~id-E~~~~~~---~p~~~~~~lA~~Ka~~v~~~~-----~~~~vI~aDTv 72 (183)
T TIGR00172 2 TKELILASQSPRRKELLEELGISFEQIVSEFD-EKSLKTT---SPRELVYRLAKEKAQAVAELL-----ADALIIGADTV 72 (183)
T ss_pred CCCEEEeCCCHHHHHHHHHCCCCeEEEcCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHHhC-----CCCEEEEeCeE
Confidence 56899999999999999999999999999999 8887777 899999999999999999887 47899999999
Q ss_pred EeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCcceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 91 VSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDKDSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 91 V~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
|++||+|+|||.|++||++||++|||++|+|+|||||+..+..+++++.|+|+|+++++++|++||++|||+
T Consensus 73 V~~~g~ilgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~t~v~f~~l~~~~I~~Yl~~~e~~ 144 (183)
T TIGR00172 73 VILDGEIYGKPKDKEEAAEFLRKLSGQEHEVYTAVALIDSVHLLTFLDVTKVHFRALDPEEIEKYVESGEPL 144 (183)
T ss_pred EEECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEECCEEEEEEEEEEEEECCCCHHHHHHHHhcCCCc
Confidence 999999999999999999999999999999999999998776678999999999999999999999999996
No 3
>PRK04056 Maf-like protein; Reviewed
Probab=100.00 E-value=5.7e-53 Score=331.21 Aligned_cols=142 Identities=28% Similarity=0.323 Sum_probs=134.7
Q ss_pred cEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEEe
Q psy14704 13 KIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVVS 92 (162)
Q Consensus 13 ~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV~ 92 (162)
.|||||+||||++||+++|++|+++||+|| |+..++. +|.+||.++|++||++|+++++ ++.+||||||||+
T Consensus 1 ~iILAS~SprR~elL~~~g~~f~v~~~~id-E~~~~~~---~p~~~v~~lA~~Ka~~v~~~~~----~~~~vI~aDTvV~ 72 (180)
T PRK04056 1 MIILASSSSTRANLLKEAGIEFEQKSLDFD-EESIKKT---SPKEFVYLAVKGKLEQFLKKYG----NECNLLVADSVVS 72 (180)
T ss_pred CEEEeCCCHHHHHHHHHCCCCeEEEcCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHHhCC----CCCEEEEeCEEEE
Confidence 389999999999999999999999999999 9887777 8999999999999999999874 3479999999999
Q ss_pred eCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCcceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 93 INDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDKDSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 93 ~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
+||+|||||.|++||++||+.|||++|+|+|||||+..+...+++++|+|+|+++|+++|++||++|||+
T Consensus 73 ~~g~ilgKP~~~~eA~~~L~~lsg~~h~V~T~v~l~~~~~~~~~~~~t~V~f~~ls~~~I~~Yv~~~e~~ 142 (180)
T PRK04056 73 CGNKILRKAKDKEEAREMLKLQSGNEISVLTCMILKSPEKEWLDLSVTTYRFKKFDEDDLEKYLESGLWQ 142 (180)
T ss_pred ECCEEecCCCCHHHHHHHHHHHCCCcEEEEEEEEEEECCeEEEEEEEEEEEECCCCHHHHHHHHhcCCcc
Confidence 9999999999999999999999999999999999998777778999999999999999999999999996
No 4
>PRK00032 Maf-like protein; Reviewed
Probab=100.00 E-value=1.2e-52 Score=331.77 Aligned_cols=142 Identities=34% Similarity=0.491 Sum_probs=135.3
Q ss_pred cEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEEe
Q psy14704 13 KIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVVS 92 (162)
Q Consensus 13 ~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV~ 92 (162)
+|||||+||||++||+++|++|+++|+++| |+..+.. +|.+||.++|++||++|++++. ++.+||||||||+
T Consensus 3 ~iILAS~SprR~elL~~~g~~f~v~~~~id-E~~~~~~---~p~~~v~~lA~~KA~~v~~~~~----~~~~vI~aDTvV~ 74 (190)
T PRK00032 3 SLYLASGSPRRRELLTQLGVPFEVLVPGIE-EQRQPGE---SAQQYVERLARDKAQAGVALAP----QDLPVLGADTIVV 74 (190)
T ss_pred CEEEeCCCHHHHHHHHHCCCCeEEEcCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHHhcC----CCCEEEEeCeEEE
Confidence 799999999999999999999999999999 8887777 8999999999999999988753 5789999999999
Q ss_pred eCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCcceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 93 INDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDKDSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 93 ~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
+||+|||||.|++||++||++|||++|+|+|||||+..+...+++++|+|+|+++|+++|++||++|||+
T Consensus 75 ~~g~IlgKP~~~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~t~V~F~~l~~~~I~~Yv~~~ep~ 144 (190)
T PRK00032 75 LDGEVLEKPRDAADAAAMLRALSGRTHQVMTAVALADSQRILSCLVVTDVTFRTLSDEEIARYWASGEPL 144 (190)
T ss_pred ECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEECCeEEEEEEEEEEEECcCCHHHHHHHHhcCCcc
Confidence 9999999999999999999999999999999999998777788999999999999999999999999996
No 5
>PRK14368 Maf-like protein; Provisional
Probab=100.00 E-value=1.3e-52 Score=332.29 Aligned_cols=144 Identities=37% Similarity=0.522 Sum_probs=135.7
Q ss_pred CCCcEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEece
Q psy14704 10 NNLKIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADT 89 (162)
Q Consensus 10 ~~~~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDT 89 (162)
.+.+|||||+||||++||+++|++|+++|++|| |+..++. +|.+||.++|+.||++|+++. ++.+||||||
T Consensus 3 ~~~~lILAS~SprR~eLL~~~g~~f~v~~~~iD-E~~~~~~---~p~~~v~~lA~~KA~~v~~~~-----~~~~vI~aDT 73 (193)
T PRK14368 3 ANSPIVLASASPRRSELLASAGIEFDVVPADIP-EEPLPGE---EPVDHVLRLAREKARAAAALA-----EGRFFIGADT 73 (193)
T ss_pred CCCcEEEeCCCHHHHHHHHHCCCCeEEEcCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHHhC-----CCCEEEEeCc
Confidence 467899999999999999999999999999999 8887777 899999999999999999886 5789999999
Q ss_pred EEeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECC--cceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 90 VVSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKD--KDSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 90 vV~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~--~~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
||++||+|||||.|++||++||++|||++|+|||||||+... ..++++++|+|+|+++|+++|++||++|||+
T Consensus 74 vV~~~g~ilgKP~~~~eA~~~L~~lsG~~h~v~Tgv~l~~~~~~~~~~~~~~t~V~f~~l~~~~I~~Yl~~~ep~ 148 (193)
T PRK14368 74 IVVCDGEIMGKPKDEADAVRMLKKLSGVPHEVITGFAVYDRERDGCVTKAVRTKVFFKPLRDEEIRDYIATGCPM 148 (193)
T ss_pred EEEECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEECCCCEEEEEEEEEEEEECCCCHHHHHHHHhcCCcc
Confidence 999999999999999999999999999999999999999754 3568999999999999999999999999996
No 6
>PRK00884 Maf-like protein; Reviewed
Probab=100.00 E-value=1.4e-52 Score=332.45 Aligned_cols=142 Identities=32% Similarity=0.478 Sum_probs=133.8
Q ss_pred CcEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEE
Q psy14704 12 LKIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVV 91 (162)
Q Consensus 12 ~~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV 91 (162)
.+|||||+||||++||+++|++|+++++++| |+..+.. +|.+||.++|..||++|++++ ++.+||||||||
T Consensus 2 ~~iILAS~SprR~elL~~~g~~f~v~~~~id-E~~~~~~---~p~~~v~~lA~~KA~~v~~~~-----~~~~VI~aDTvV 72 (194)
T PRK00884 2 PQLILASTSPYRRALLEKLQLPFECAAPEVD-ETPRPGE---SPRQLVLRLAQEKAQSLASRY-----PDHLIIGSDQVC 72 (194)
T ss_pred CCEEEeCCCHHHHHHHHHCCCCCEEECCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHhhC-----CCCEEEEeCeEE
Confidence 3799999999999999999999999999999 8877777 899999999999999999876 578999999999
Q ss_pred eeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEEC--CcceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 92 SINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTK--DKDSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 92 ~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~--~~~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
++||+|||||.|.+||++||++|||++|+|||||||+.. +...+++++|+|+|++||+++|++||++|||+
T Consensus 73 ~~~g~ilgKP~~~eeA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~~~t~V~f~~ls~~~I~~Yv~~~ep~ 145 (194)
T PRK00884 73 VLDGEITGKPLTEENARAQLRKASGNIVTFYTGLALFNSATGHLQTEVEPFDVHFRHLSEAEIDRYVRKEHPL 145 (194)
T ss_pred EECCEEecCCCCHHHHHHHHHHHCCCceEEEEEEEEEECCCCeEEEEEEEEEEEECCCCHHHHHHHHhhCCCc
Confidence 999999999999999999999999999999999999975 33568999999999999999999999999996
No 7
>PRK00648 Maf-like protein; Reviewed
Probab=100.00 E-value=2.8e-52 Score=330.07 Aligned_cols=144 Identities=46% Similarity=0.588 Sum_probs=135.8
Q ss_pred CCcEEEecCCHHHHHHHHhCCCCeEEe-cCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEece
Q psy14704 11 NLKIVLASSSPRRSQILKSIGLKFEVI-PSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADT 89 (162)
Q Consensus 11 ~~~iILAS~SprR~~lL~~~g~~f~v~-~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDT 89 (162)
+++|||||+||||++||+++|++|+++ ++++| |+..+.. +|.+||.++|++||++|++++. ++.+||||||
T Consensus 2 ~~~lILAS~SprR~elL~~~g~~f~v~~~~~~d-E~~~~~~---~p~~~v~~lA~~Ka~~v~~~~~----~~~~VI~aDT 73 (191)
T PRK00648 2 KYKIILASSSPRRKEILEGFRIPFEVVPSPFVE-ESYPYSL---DPEEITLELARLKAEAVRSDLF----PDELIITADT 73 (191)
T ss_pred CCcEEEeCCCHHHHHHHHHCCCCeEEEeCCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHHhhC----CCCEEEEeCe
Confidence 578999999999999999999999999 77888 9877777 8999999999999999998653 5789999999
Q ss_pred EEeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCcceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 90 VVSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDKDSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 90 vV~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
||++||+|||||.|++||++||++|||++|+|||||||+..+...+++++|+|+|+++|+++|++||++|||+
T Consensus 74 vV~~~g~ilgKP~~~~eA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~t~V~f~~ls~~~I~~Yv~~~ep~ 146 (191)
T PRK00648 74 IVWYDGKVLGKPKDEEEAVEMLRTLSGKTHEVITGVCLLHNGKLLSGSETTQVTFRELSDEEIEYYIDTYKPL 146 (191)
T ss_pred EEEECCEEeCCCCCHHHHHHHHHHhCCCCeEEEEEEEEEECCEEEEEEEEEEEEECCCCHHHHHHHHcCCCcc
Confidence 9999999999999999999999999999999999999998777789999999999999999999999999996
No 8
>PRK00078 Maf-like protein; Reviewed
Probab=100.00 E-value=3.4e-52 Score=329.81 Aligned_cols=144 Identities=46% Similarity=0.668 Sum_probs=132.8
Q ss_pred CcEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceE
Q psy14704 12 LKIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPV-SKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTV 90 (162)
Q Consensus 12 ~~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~-~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTv 90 (162)
++|||||+||||++||+++|++|+++|++|| |+... .. +|.+||.++|++||++|++++. .++.+|||||||
T Consensus 1 ~~iILAS~SprR~elL~~~g~~f~v~~~~id-E~~~~~~~---~p~~~~~~lA~~KA~~v~~~~~---~~~~lvI~aDTv 73 (192)
T PRK00078 1 MKIILASASERRQELLKRILEDFQVIVSDFD-ESSVPFKG---NIESYVMNLAEGKARSVSKKLD---QESSIVIGCDTI 73 (192)
T ss_pred CcEEEeCCCHHHHHHHHhCCCCeEEeCCCCC-CCCCCCCC---CHHHHHHHHHHHHHHHHHHhcC---CCCCEEEEeCeE
Confidence 5799999999999999999999999999999 88655 35 8999999999999999998762 146799999999
Q ss_pred EeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEEC--CcceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 91 VSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTK--DKDSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 91 V~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~--~~~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
|++||+|||||.|++||++||++|||++|+|||||||+.. +...+++++|+|+|++||+++|++||++|||+
T Consensus 74 V~~~g~ilgKP~~~eeA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~~~t~V~f~~ls~~~I~~Yi~~~ep~ 147 (192)
T PRK00078 74 VAFNGKVLGKPKDEEDAFEMLKALSGNEHEVYSGIAILDTKSNKIIKDFVCTEVKFSKLTDRQIRKYINTGEPM 147 (192)
T ss_pred EEECCEEeCCCCCHHHHHHHHHHHCCCcEEEEEEEEEEECCCCEEEEEEEEEEEEECCCCHHHHHHHHcCCCcc
Confidence 9999999999999999999999999999999999999973 34568999999999999999999999999996
No 9
>PRK14367 Maf-like protein; Provisional
Probab=100.00 E-value=4.1e-52 Score=331.55 Aligned_cols=146 Identities=34% Similarity=0.537 Sum_probs=135.4
Q ss_pred cEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhccc--CCCCCceEEEeceE
Q psy14704 13 KIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKE--DNVEPDLIIGADTV 90 (162)
Q Consensus 13 ~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~--~~~~~~~vI~aDTv 90 (162)
+|||||+||||++||+++|++|+++|++|| |+..+++ +|.+||.++|++||++|++.+.. ...++.+|||||||
T Consensus 3 ~iILAS~SprR~eLL~~~Gi~f~v~~~~iD-E~~~~~~---~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~~~vI~aDTv 78 (202)
T PRK14367 3 TLYLGSNSPRRMEILTQLGYRVVKLPAGID-ETVKAGE---TPARYVQRMAEEKNRTALTLFCETNGTMPDFPLITADTC 78 (202)
T ss_pred CEEEeCCCHHHHHHHHHCCCCeEEECCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHHhhccccccCCCCEEEEeCcE
Confidence 799999999999999999999999999999 8877777 89999999999999999876421 11257899999999
Q ss_pred EeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCcceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 91 VSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDKDSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 91 V~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
|++||+|+|||.|++||++||++|||++|+|||||||+..+...+++++|+|+|+++|+++|++||++||||
T Consensus 79 V~~dg~IlgKP~~~eeA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~T~V~f~~ls~~~I~~Yv~~~e~~ 150 (202)
T PRK14367 79 VVSDGIILGKPRSQAEAIEFLNRLSGKQHTVLTAVCIHYRGKTSSRVQTNRVVFKPLSSEEISAYVQSGEPM 150 (202)
T ss_pred EEECCEEecCCCCHHHHHHHHHHhCCCCeEEEEEEEEEECCEEEEEEEEEEEEECCCCHHHHHHHHhcCCcc
Confidence 999999999999999999999999999999999999998777778999999999999999999999999996
No 10
>PRK14362 Maf-like protein; Provisional
Probab=100.00 E-value=4.6e-52 Score=332.22 Aligned_cols=145 Identities=37% Similarity=0.510 Sum_probs=133.9
Q ss_pred CCCcEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEece
Q psy14704 10 NNLKIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADT 89 (162)
Q Consensus 10 ~~~~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDT 89 (162)
.+.+|||||+||||++||+++|++|+++++++|||...++. +|.+||.++|++||++|++++ ++.+||||||
T Consensus 10 ~~~~iILAS~SprR~eLL~~~g~~f~v~~~~~dEe~~~~~~---~p~~~v~~lA~~KA~~v~~~~-----~~~~VI~ADT 81 (207)
T PRK14362 10 AACPVVLASGSPRRREFLEQMGLPFEVILPGAAEPSPIEGE---QPEAYARRAAEAKARAVAADH-----AGRLVIAADT 81 (207)
T ss_pred cCceEEEeCCCHHHHHHHHHCCCCcEEECCCCCCCCCCCCC---CHHHHHHHHHHHHHHHHHHhC-----CCCEEEEeCe
Confidence 35679999999999999999999999999999944555666 899999999999999999887 5789999999
Q ss_pred EEeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEEC-CcceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 90 VVSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTK-DKDSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 90 vV~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~-~~~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
||++||+|+|||.|++||++||++|||++|+|||||||+.. +....++++|+|+|++|++++|++||++|||+
T Consensus 82 vV~~~g~ilgKP~~~eeA~~~L~~lsG~~H~V~Tgv~l~~~~~~~~~~~~~T~V~F~~ls~~~I~~Yv~~~ep~ 155 (207)
T PRK14362 82 VVALDGMILGKPADRADALSMLRRLAGRTHEVVSACCVVLPDGGREVFHAITRVTMWDWPEAALAAYVATGEPS 155 (207)
T ss_pred EEEeCCEEcCCCCCHHHHHHHHHHhCCCceEEEEEEEEEECCCcEEEEEEEEEEEECCCCHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999999999854 44568999999999999999999999999996
No 11
>PRK02141 Maf-like protein; Reviewed
Probab=100.00 E-value=5.4e-52 Score=331.84 Aligned_cols=146 Identities=26% Similarity=0.405 Sum_probs=135.0
Q ss_pred CCcEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceE
Q psy14704 11 NLKIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTV 90 (162)
Q Consensus 11 ~~~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTv 90 (162)
+.+|||||+||||++||+++|++|++++++|| |+..+.+ +|.+||.++|++||++|++++.. .++.+|||||||
T Consensus 8 ~~~iILAS~SprR~elL~~~G~~f~v~~~~iD-E~~~~~~---~p~~~~~~lA~~KA~~v~~~l~~--~~~~iVI~aDTv 81 (207)
T PRK02141 8 PPRLILASSSRYRRELLERLRLPFDVVSPDID-ETPLAGE---TPAATALRLAAAKARAVAATIDA--PPGALVIGSDQV 81 (207)
T ss_pred CCCEEEeCCCHHHHHHHHHCCCCeEEEcCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHHhhcc--CCCCEEEEeCeE
Confidence 57899999999999999999999999999999 9887777 89999999999999999985421 257899999999
Q ss_pred EeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECC--cceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 91 VSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKD--KDSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 91 V~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~--~~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
|++||+|||||.|.+||++||++|||++|+|||||||++.. ...+++++|+|+|++||+++|++||++||||
T Consensus 82 V~~~g~ilgKP~~~~eA~~mL~~lsG~~H~V~Tgv~l~~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yv~~~ep~ 155 (207)
T PRK02141 82 ATFDGLQIGKPGTHERALAQLQAMRGRTVEFHSALCLYDSRTGETQSEDVVTRVRFRTLTDAELDAYLRAETPY 155 (207)
T ss_pred EEECCEEecCCCCHHHHHHHHHHhCCCceEEEEEEEEEECCCCeEEEEEEEEEEEECCCCHHHHHHHHccCCCC
Confidence 99999999999999999999999999999999999999743 4568899999999999999999999999996
No 12
>PRK14366 Maf-like protein; Provisional
Probab=100.00 E-value=6.1e-52 Score=328.88 Aligned_cols=144 Identities=32% Similarity=0.376 Sum_probs=133.9
Q ss_pred CCCcEEEecCCHHHHHHHHhCCC-CeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEec
Q psy14704 10 NNLKIVLASSSPRRSQILKSIGL-KFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGAD 88 (162)
Q Consensus 10 ~~~~iILAS~SprR~~lL~~~g~-~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aD 88 (162)
+..+|||||+||||++||+++|+ .|+++|++|| |+..+.+ +|.+||.++|++||++|++.+ ++.+|||||
T Consensus 3 ~~~~iILAS~SprR~elL~~~G~~~~~v~~~~iD-E~~~~~~---~p~~~v~~lA~~KA~~v~~~~-----~~~~vI~AD 73 (195)
T PRK14366 3 KFDNLILASSSKQRLALLEQIGVVPGEIVSPDID-ESPLKKE---LPKDYSIRMAKEKAEKVQSLR-----PDKFVLGAD 73 (195)
T ss_pred CCCeEEEeCCCHHHHHHHHhCCCCCCEEeCCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHHhC-----CCCEEEEeC
Confidence 44579999999999999999999 5699999999 8887777 899999999999999998876 578999999
Q ss_pred eEEeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCc-ceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 89 TVVSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDK-DSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 89 TvV~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~-~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
|||++||+|+|||.|.+||++||++|||++|+|||||||+..++ ..+++++|+|+|+++++++|++||++|||+
T Consensus 74 TvV~~~g~ilgKP~~~eeA~~mL~~lsG~~h~V~Tgv~l~~~~~~~~~~~~~T~V~F~~ls~~~I~~Yv~~~ep~ 148 (195)
T PRK14366 74 TVVCCGRRILLKAETEEQAEEYLELLSGRRHRVYTSVCLYTPGGKLHIRSVVTVVKFKRLSKQEIKYYIASGEWK 148 (195)
T ss_pred eEEEECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEECCCeEEEEEEEEEEEECCCCHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999999999997554 357899999999999999999999999996
No 13
>PRK00148 Maf-like protein; Reviewed
Probab=100.00 E-value=6.5e-52 Score=328.63 Aligned_cols=142 Identities=37% Similarity=0.559 Sum_probs=134.2
Q ss_pred CcEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEE
Q psy14704 12 LKIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVV 91 (162)
Q Consensus 12 ~~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV 91 (162)
++|||||+||||++||+++|++|++++++|| |+..+.. +|.+||.++|++||.+|++++ ++.+||||||||
T Consensus 1 ~~iILAS~SprR~elL~~~g~~f~~~~~~id-E~~~~~~---~p~~~v~~lA~~KA~~v~~~~-----~~~~vI~aDTvV 71 (194)
T PRK00148 1 TRLVLASASPARLKLLRLAGIPPLVVVSHVD-EDAIAAS---SPSELVQALARAKAEAVAENA-----PDAVVLGCDSML 71 (194)
T ss_pred CCEEEeCCCHHHHHHHHHCCCCeEEECCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHHhC-----CCCEEEEeCcEE
Confidence 4799999999999999999999999999999 8877777 899999999999999999876 478999999999
Q ss_pred eeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCc--ceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 92 SINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDK--DSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 92 ~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~--~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
++||+|||||.|.+||++||++|||++|+|||||||+...+ ..+++++|+|+|++|++++|++||++|||+
T Consensus 72 ~~~g~Il~KP~~~eeA~~~L~~lsG~~h~v~T~v~l~~~~~~~~~~~~~~T~V~F~~l~~~~I~~Yl~~~e~~ 144 (194)
T PRK00148 72 LIDGRLLGKPHTPEEAIERWQQMSGRTGELYTGHALIDLDQGKTVTFYERTEVHFAELSDEEIEAYVATGEPL 144 (194)
T ss_pred EECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEECCCCeEEEEEEEEEEEECCCCHHHHHHHHhhCCcc
Confidence 99999999999999999999999999999999999997653 568999999999999999999999999996
No 14
>PRK14361 Maf-like protein; Provisional
Probab=100.00 E-value=8.7e-52 Score=326.21 Aligned_cols=139 Identities=40% Similarity=0.597 Sum_probs=132.4
Q ss_pred EEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEEee
Q psy14704 14 IVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVVSI 93 (162)
Q Consensus 14 iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV~~ 93 (162)
|||||+||||++||+++|++|+++++++| |+. ... +|.+||.++|++||++|+.++ ++.+||||||||++
T Consensus 1 lILAS~SprR~elL~~~g~~f~v~~~~~d-E~~-~~~---~p~~~v~~lA~~Ka~~v~~~~-----~~~~vI~aDTvV~~ 70 (187)
T PRK14361 1 VILASGSPRRRELLENLGVPFQVVVSGEA-EDS-TET---DPARLAAELALLKARAVARLH-----PDAVVIAADTVVAL 70 (187)
T ss_pred CEEccCCHHHHHHHHHCCCCcEEECCCCC-CCC-CCC---CHHHHHHHHHHHHHHHHHHhC-----CCCEEEEeCeEEEE
Confidence 69999999999999999999999999999 876 445 899999999999999998876 57899999999999
Q ss_pred CCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCcceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 94 NDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDKDSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 94 ~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
||+|+|||.|.+||++||++|||++|+|+||||++..++..+++++|+|+|+++|+++|++||++||||
T Consensus 71 ~g~ilgKP~~~eeA~~~L~~lsG~~h~V~T~v~l~~~~~~~~~~~~t~V~f~~ls~~~I~~Yv~~~e~~ 139 (187)
T PRK14361 71 GGVLLAKPADEAENEAFLRVLSGRTHQVYTGVAVLSRGTEQVGVERTDVTFRALTAAEISFYARSGEGL 139 (187)
T ss_pred CCEEecCCCCHHHHHHHHHHhCCCceEEEEEEEEEECCEEEEEEEEEEEEECCCCHHHHHHHHhCCCCc
Confidence 999999999999999999999999999999999998887788999999999999999999999999996
No 15
>PRK04694 Maf-like protein; Reviewed
Probab=100.00 E-value=1.3e-51 Score=325.99 Aligned_cols=145 Identities=29% Similarity=0.475 Sum_probs=133.7
Q ss_pred cEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEEe
Q psy14704 13 KIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVVS 92 (162)
Q Consensus 13 ~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV~ 92 (162)
.|||||+||||++||+++|++|+++|+++| |+..+.. +|.+||.++|.+||++|++++.. ..++.+||||||||+
T Consensus 1 mlILAS~SprR~elL~~~g~~f~~~~~~id-E~~~~~~---~p~~~v~~lA~~KA~~v~~~~~~-~~~~~lvI~aDTvv~ 75 (190)
T PRK04694 1 MLYLASRSPRRRELLQRLDVPFQTLQLDVP-EVRAADE---SPDHYVQRVALEKAHAGLALVQA-ADADAIVLGSDTEVV 75 (190)
T ss_pred CEEEcCCCHHHHHHHHHCCCCcEEecCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHHHhhc-cCCCCEEEEeCeEEE
Confidence 389999999999999999999999999999 9887777 89999999999999999887521 125789999999999
Q ss_pred eCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCc-ceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 93 INDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDK-DSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 93 ~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~-~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
+||+|||||.|.+||++||++|||++|+|+|||||+..+. ..+++++|+|+|+++|+++|++||++|||+
T Consensus 76 ~~g~ilgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~~t~V~F~~ls~~~I~~Yv~~~ep~ 146 (190)
T PRK04694 76 LGERVFGKPVDVDDAIAMLRALSGRTHQVLTAVVLVCAQRAPAQALVVSEVTFDLLDDAQIAAYAASGEPM 146 (190)
T ss_pred ECCEEecCCCCHHHHHHHHHHhCCCceEEEEEEEEEECCccEEEEEEEEEEEECCCCHHHHHHHHcCCCcc
Confidence 9999999999999999999999999999999999997554 458899999999999999999999999996
No 16
>PRK00234 Maf-like protein; Reviewed
Probab=100.00 E-value=1.6e-51 Score=325.98 Aligned_cols=141 Identities=32% Similarity=0.429 Sum_probs=132.8
Q ss_pred cEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEEe
Q psy14704 13 KIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVVS 92 (162)
Q Consensus 13 ~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV~ 92 (162)
+|||||+||||++||+++|++|+++|++|| |+..+.. +|.+||.++|++||++|++++ ++.+||||||||+
T Consensus 3 ~iILAS~SprR~elL~~~gi~f~v~~~~iD-E~~~~~~---~p~~~v~~lA~~Ka~~v~~~~-----~~~~vI~aDTvV~ 73 (192)
T PRK00234 3 PLLLASSSPYRRELLARLRLPFTWASPDID-ESHRPDE---SAEELVRRLARQKAEALAGSH-----PQHLIIGSDQVAV 73 (192)
T ss_pred CEEEecCCHHHHHHHHHCCCCcEEECCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHhhC-----CCCEEEEeCeEEE
Confidence 799999999999999999999999999999 8887777 899999999999999999877 4789999999999
Q ss_pred eCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCc--ceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 93 INDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDK--DSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 93 ~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~--~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
+||+|||||.|++||++||++|||++|+|+|||||++..+ ...++++|+|+|+++++++|++||++|||+
T Consensus 74 ~~g~Il~KP~~~~eA~~mL~~lsG~~h~V~T~v~l~~~~~~~~~~~~~~t~v~f~~l~~~~I~~Yl~~ge~~ 145 (192)
T PRK00234 74 LGGQILGKPHTFERAREQLLAASGQSVTFLTGLALLNSATGHCQVDCVPFTVHMRELDRARIERYLEAEQPL 145 (192)
T ss_pred eCCEECCCCCCHHHHHHHHHHHCCCcEEEEEEEEEEECCCCeEEEEEEEEEEEECCCCHHHHHHHHhcCCcc
Confidence 9999999999999999999999999999999999997543 347889999999999999999999999996
No 17
>PRK14363 Maf-like protein; Provisional
Probab=100.00 E-value=1.6e-51 Score=328.42 Aligned_cols=142 Identities=42% Similarity=0.625 Sum_probs=133.5
Q ss_pred CcEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEE
Q psy14704 12 LKIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVV 91 (162)
Q Consensus 12 ~~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV 91 (162)
++|||||+||||++||+++|++|+++|++|| |+.. . +|.+||.++|++||++|++++. .++.+||||||||
T Consensus 1 ~~iILAS~SprR~elL~~~G~~f~v~~~~iD-E~~~--~---~P~~~v~~lA~~KA~~v~~~~~---~~~~lvI~aDTVV 71 (204)
T PRK14363 1 MRIILASSSPRRRQLMELLGIEFEVEKPDVE-EEFL--E---SPEETVRELSLRKAEWVFKKRK---EEEILVIGSDTVV 71 (204)
T ss_pred CcEEEeCCCHHHHHHHHhCCCCeEEEcCCCC-CCCC--C---CHHHHHHHHHHHHHHHHHHhcc---CCCCEEEEeCeEE
Confidence 5799999999999999999999999999999 8763 5 8999999999999999998752 1578999999999
Q ss_pred eeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCcceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 92 SINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDKDSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 92 ~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
++||+|||||.|.+||++||++|||++|+|||||||+..+...+++++|+|+|+++|+++|++||++|||+
T Consensus 72 ~~~g~IlgKP~~~eeA~~~L~~lsG~~H~V~T~v~l~~~~~~~~~~~~T~V~F~~ls~~~I~~Yv~~~ep~ 142 (204)
T PRK14363 72 VLDGNILGKPESLEEAKGMLKKLSGRWHVVYTGVAFVSSETKDVIVSSTKVRFRELPESVIDYYVEKYRPL 142 (204)
T ss_pred EECCEEcCCCCCHHHHHHHHHHHCCCCcEEEEEEEEEECCeEEEEEEEEEEEECCCCHHHHHHHHhcCCCh
Confidence 99999999999999999999999999999999999998877788999999999999999999999999996
No 18
>PRK14364 Maf-like protein; Provisional
Probab=100.00 E-value=1.6e-51 Score=323.29 Aligned_cols=138 Identities=38% Similarity=0.578 Sum_probs=132.4
Q ss_pred EecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEEeeCC
Q psy14704 16 LASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVVSIND 95 (162)
Q Consensus 16 LAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV~~~g 95 (162)
|||+||||++||+++|++|+++|+++| |+..+.. +|.+||.++|.+||++|++++ ++.+||||||||++||
T Consensus 1 LAS~SprR~elL~~~g~~f~v~~~~~d-E~~~~~~---~p~~~~~~lA~~KA~~v~~~~-----~~~~vI~aDTvV~~~g 71 (181)
T PRK14364 1 LASSSPRRRELLQQLGLNFEIYSPDID-ESVHEGE---LVHQYVERLAREKAQAVLNIF-----PDSVIIAADTSLGLDG 71 (181)
T ss_pred CCCCCHHHHHHHHHCCCCeEEECCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHHhC-----CCCEEEEeCeEEEECC
Confidence 899999999999999999999999999 9988777 899999999999999999877 5789999999999999
Q ss_pred EEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCcceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 96 MMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDKDSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 96 ~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
+|||||.|.+||++||++|||++|+|||||||...+....++++|+|+|+++|+++|++||++|||+
T Consensus 72 ~ilgKP~~~eeA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~t~V~f~~ls~~~I~~Yv~~~e~~ 138 (181)
T PRK14364 72 QIIGKPDSKQHAFDIWKQLSGRWHDVFSGICIATQQQILSQVVQTQVEFASLTTQDMEDYWATGEPV 138 (181)
T ss_pred EEecCCCCHHHHHHHHHHhCCCCeEEEEEEEEEECCEEEEEEEEEEEEECCCCHHHHHHHHhcCCCc
Confidence 9999999999999999999999999999999998777778999999999999999999999999996
No 19
>PRK04425 Maf-like protein; Reviewed
Probab=100.00 E-value=5.1e-51 Score=323.89 Aligned_cols=143 Identities=24% Similarity=0.392 Sum_probs=133.3
Q ss_pred CCcEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceE
Q psy14704 11 NLKIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTV 90 (162)
Q Consensus 11 ~~~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTv 90 (162)
.++|||||+||||++||+++|++|+++|++|| |+..+.+ +|.++|.++|.+||+++++++ ++.+|||||||
T Consensus 4 ~~~iILAS~SprR~elL~~~g~~f~v~~~~iD-E~~~~~~---~p~~~~~~lA~~KA~~v~~~~-----~~~lvI~aDTv 74 (196)
T PRK04425 4 ELPLVLGTSSVFRREQMERLGIAFQAASPDFD-ETPMLGE---SAPQTALRLAEGKARSLTGRF-----PEALIVGADQV 74 (196)
T ss_pred CCcEEEeCCCHHHHHHHHHCCCCeEEECCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHhhC-----CCCEEEEeCeE
Confidence 46899999999999999999999999999999 8887777 899999999999999998876 57899999999
Q ss_pred EeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECC--cceEEEEEEEEEEcCCCHHHHHHHHHcC-CCC
Q psy14704 91 VSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKD--KDSRFYNQTQVTFANLTPAVISAYVKTR-EPL 162 (162)
Q Consensus 91 V~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~--~~~~~~~~t~V~F~~l~~~~I~~Yv~tg-ep~ 162 (162)
|++||+|+|||.|.+||++||++|||++|+|||||||+... ...+++++|+|+|+++|+++|++||+++ +|+
T Consensus 75 V~~~g~ilgKP~~~eeA~~~L~~lsg~~h~v~T~v~l~~~~~~~~~~~~~~t~V~f~~ls~~~I~~Yv~~~~~~~ 149 (196)
T PRK04425 75 AWCDGRQWGKPMNLANAQKMLMHLSGREIEFYSALVLLNTVTGRMQRHIDKTVVVMRQLDELHILRYLEREPDAV 149 (196)
T ss_pred EEECCEEecCCCCHHHHHHHHHHhCCCcEEEEEEEEEEECCCCeEEEEEEEEEEEECCCCHHHHHHHHhCCCCcc
Confidence 99999999999999999999999999999999999999743 3457899999999999999999999996 775
No 20
>PRK01526 Maf-like protein; Reviewed
Probab=100.00 E-value=5.2e-51 Score=325.81 Aligned_cols=145 Identities=34% Similarity=0.522 Sum_probs=133.6
Q ss_pred CCCcEEEecCCHHHHHHHHhCCC-CeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEec
Q psy14704 10 NNLKIVLASSSPRRSQILKSIGL-KFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGAD 88 (162)
Q Consensus 10 ~~~~iILAS~SprR~~lL~~~g~-~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aD 88 (162)
+..+|||||+||||++||+++|+ .|+++|++|| |+..+.+ +|.+||.++|++||++|+++++ ++.+|||||
T Consensus 6 ~~~~lILAS~SprR~elL~~~g~~~~~v~~~~iD-E~~~~~~---~p~~~v~~lA~~KA~~v~~~~~----~~~~VI~aD 77 (205)
T PRK01526 6 KNLPIILASSSPARIELLNRIKIIPSQIIPADID-ETPNLRE---LPAPLAIRLAYEKAIKIASQIE----ESAIIIAAD 77 (205)
T ss_pred CCCEEEEeCCCHHHHHHHHhcCCCCceEecCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHhhcC----CCCEEEEeC
Confidence 45789999999999999999999 5679999999 9888777 8999999999999999998873 468999999
Q ss_pred eEEeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCc----ceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 89 TVVSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDK----DSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 89 TvV~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~----~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
|||++||+|+|||.|.+||++||++|||++|+|||||||+.... ..+++++|+|+|+++|+++|++||++|||+
T Consensus 78 TvV~~~g~IlgKP~~~~eA~~mL~~lsG~~h~V~Tgv~l~~~~~~~~~~~~~~~~t~V~f~~ls~~~I~~Yv~~~e~~ 155 (205)
T PRK01526 78 TVAAVGRRILPKATTYEEVKNCIKMLSGRRHRVYTGLCIIKKENDQLTVRQKIVQTIVKFKKLSDEEINFYCSLDEGI 155 (205)
T ss_pred eEEEECCEEecCCCCHHHHHHHHHHhCCCCeEEEEEEEEEECCCCceEEEEEEEEEEEEECCCCHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999999999999997432 247899999999999999999999999996
No 21
>cd00555 Maf Nucleotide binding protein Maf. Maf has been implicated in inhibition of septum formation in eukaryotes, bacteria and archaea, but homologs in B.subtilis and S.cerevisiae are nonessential for cell division. Maf has been predicted to be a nucleotide- or nucleic acid-binding protein with structural similarity to the hypoxanthine/xanthine NTP pyrophosphatase Ham1 from Methanococcus jannaschii, RNase H from Escherichia coli, and some other nucleotide or RNA-binding proteins.
Probab=100.00 E-value=4.3e-51 Score=320.61 Aligned_cols=141 Identities=45% Similarity=0.697 Sum_probs=133.5
Q ss_pred EEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEEee
Q psy14704 14 IVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVVSI 93 (162)
Q Consensus 14 iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV~~ 93 (162)
|||||+||||++||+++|++|+++|++|| |+..+.. +|.+||.++|++||++|+++++ ++.+||||||||++
T Consensus 1 iILaS~SprR~elL~~~g~~f~~~~~~iD-E~~~~~~---~p~~~v~~lA~~Ka~~v~~~~~----~~~liI~aDtvv~~ 72 (180)
T cd00555 1 LILASASPRRRELLEQLGIPFEVVPSDID-ETPIKGE---SPEDYVLRLAEAKAEAVAARLP----PDALVIGADTVVVL 72 (180)
T ss_pred CEECCCCHHHHHHHHhCCCCeEEEcCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHHhCC----CCCEEEEecEEEEE
Confidence 69999999999999999999999999999 9988887 8999999999999999999873 27899999999999
Q ss_pred CCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEEC-CcceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 94 NDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTK-DKDSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 94 ~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~-~~~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
||+|+|||.|.+||++||++|||++|+|+|||||+.. +..++++++|+|+|+++++++|++||++|+|+
T Consensus 73 ~g~il~KP~~~~eA~~~L~~lsg~~h~v~T~v~l~~~~~~~~~~~~~t~v~f~~l~~~~I~~Yi~~~~~~ 142 (180)
T cd00555 73 DGRILGKPKDREEAREMLKRLSGRTHEVYTGVALIDPGGKLVTDVESTKVRFRELSDEEIEAYVASGEPL 142 (180)
T ss_pred CCEEEcCCCCHHHHHHHHHHHcCCCcEEEEEEEEEECCcEEEEEEEEEEEEECCCCHHHHHHHHhcCCcc
Confidence 9999999999999999999999999999999999987 44568999999999999999999999999996
No 22
>PRK01441 Maf-like protein; Reviewed
Probab=100.00 E-value=7.7e-51 Score=325.33 Aligned_cols=150 Identities=32% Similarity=0.445 Sum_probs=135.8
Q ss_pred cCCCcEEEecCCHHHHHHHHhCCCCeE-EecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccC-CCCCceEEE
Q psy14704 9 LNNLKIVLASSSPRRSQILKSIGLKFE-VIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKED-NVEPDLIIG 86 (162)
Q Consensus 9 l~~~~iILAS~SprR~~lL~~~g~~f~-v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~-~~~~~~vI~ 86 (162)
+.+++|||||+||||++||+++|++|. ++|++|| |+..+.. +|.+||.++|++||++|++++..+ ..++.+|||
T Consensus 2 ~~~~~iILAS~SprR~elL~~~Gi~f~~v~~~~iD-E~~~~~~---~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~~vI~ 77 (207)
T PRK01441 2 AGRPKLVLASGSPRRVELLNQAGIEPDRLMPADID-ETPKRAE---HPRSLARRLSREKAEAALEALQGDDDWRGAYILA 77 (207)
T ss_pred CCCCcEEEeCCCHHHHHHHHhcCCCCeEEeCCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHHhccccccCCCcEEEe
Confidence 356789999999999999999999875 7899999 9887777 899999999999999999876321 125789999
Q ss_pred eceEEeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCc-ceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 87 ADTVVSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDK-DSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 87 aDTvV~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~-~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
|||||++||+|||||.|++||++||++|||++|+|+|||||+..+. ..+++++|+|+|+++|+++|++||++|||+
T Consensus 78 aDTvV~~~g~il~KP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~~T~V~F~~ls~~~I~~Yv~~~e~~ 154 (207)
T PRK01441 78 ADTVVAVGRRILPKAELVDEASQCLRLLSGRNHRVYTGVCLVTPDGKLRQKLVETRVRFKRLSREDIEAYLASGEWR 154 (207)
T ss_pred cCEEEEECCEEcCCCCCHHHHHHHHHHHCCCceEEEEEEEEEECCceEEEEEEEEEEEECCCCHHHHHHHHhcCCCc
Confidence 9999999999999999999999999999999999999999986554 447899999999999999999999999996
No 23
>PRK01839 Maf-like protein; Reviewed
Probab=100.00 E-value=1e-50 Score=325.05 Aligned_cols=147 Identities=32% Similarity=0.524 Sum_probs=133.0
Q ss_pred CcEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCC------CCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEE
Q psy14704 12 LKIVLASSSPRRSQILKSIGLKFEVIPSNFDESSI------PVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLII 85 (162)
Q Consensus 12 ~~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~------~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI 85 (162)
++|||||+||||++||+++|++|+++|++|| |+. ..++ +|.+||.++|++||++|++++.....++.+||
T Consensus 10 ~~lILAS~SprR~elL~~~gi~f~v~~~~id-E~~~~~~~~~~~~---~p~~~v~~lA~~Ka~~v~~~l~~~~~~~~lvI 85 (209)
T PRK01839 10 PFLYLASQSPRRQELLQQLGVRFELLLPRPD-EDAEALEAELPGE---APDDYVQRVCVAKAEAARARLVARGLPAAPVL 85 (209)
T ss_pred CCEEEeCCCHHHHHHHHHCCCCeEEeCCCCC-cCccccccCCCCC---CHHHHHHHHHHHHHHHHHHhhccccCCCCEEE
Confidence 4699999999999999999999999999999 864 2344 79999999999999999987632223578999
Q ss_pred EeceEEeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCcc--eEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 86 GADTVVSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDKD--SRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 86 ~aDTvV~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~~--~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
||||||++||+|+|||.|.+||++||++|||++|+|||||||+..... ++++++|+|+|+++++++|++||++|||+
T Consensus 86 ~aDTvV~~~g~IlgKP~~~eeA~~~L~~lsg~~h~V~T~v~l~~~~~~~~~~~~~~T~V~F~~l~~~~I~~Yi~~~e~~ 164 (209)
T PRK01839 86 VADTTVTIDGAILGKPADAADALAMLTRLAGRTHRVLTAVAVIDADGELMPPALSRSRVRFAPATRDAIARYVASGEPF 164 (209)
T ss_pred EeCeEEEECCEEecCCCCHHHHHHHHHHhCCCCcEEEEEEEEEECCCeEEEEEEEEEEEEECCCCHHHHHHHHhcCCCh
Confidence 999999999999999999999999999999999999999999975543 38899999999999999999999999996
No 24
>PRK02478 Maf-like protein; Reviewed
Probab=100.00 E-value=1.2e-50 Score=322.43 Aligned_cols=143 Identities=31% Similarity=0.471 Sum_probs=131.4
Q ss_pred CCcEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCC------CCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceE
Q psy14704 11 NLKIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPV------SKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLI 84 (162)
Q Consensus 11 ~~~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~------~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~v 84 (162)
..+|||||+||||++||+++|++|+++++++| |+..+ .. +|.+||.++|+.||++|++++ ++.+|
T Consensus 2 ~~~iILAS~SprR~elL~~~g~~f~v~~~~id-E~~~~~~~~~~~~---~p~~~v~~lA~~Ka~~v~~~~-----~~~iv 72 (199)
T PRK02478 2 TVKLILASKSPFRRALLENAGLEFSAAAADID-ERAVEAPLEESGA---TPEDVALVLAEAKAIDVSERF-----PGALV 72 (199)
T ss_pred CCcEEEeCCCHHHHHHHHHCCCCeEEecCCCC-CCccccccccCCC---CHHHHHHHHHHHHHHHHHHHC-----CCCEE
Confidence 35799999999999999999999999999999 76543 23 799999999999999999887 47899
Q ss_pred EEeceEEeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCcc-eEEEEEEEEEEcCCCHHHHHHHHHc--CCC
Q psy14704 85 IGADTVVSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDKD-SRFYNQTQVTFANLTPAVISAYVKT--REP 161 (162)
Q Consensus 85 I~aDTvV~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~~-~~~~~~t~V~F~~l~~~~I~~Yv~t--gep 161 (162)
|||||||++||+|||||.|++||++||++|||++|+|+|||||+..+.. ++++++|+|+|+++|+++|++||++ +||
T Consensus 73 I~aDTvV~~~g~ilgKP~~~~eA~~~L~~lsG~~h~V~T~v~l~~~~~~~~~~~~~t~V~f~~ls~~~I~~Yv~~~g~e~ 152 (199)
T PRK02478 73 IGCDQTMSLGDEVFHKPKDMEEARRHLQKLSGKTHQLNSAVVLVRDGKVLWRHVSIAHMTMRDLDAGFIGRHLARVGEKA 152 (199)
T ss_pred EEeCeEEEECCEEecCCCCHHHHHHHHHHhcCCCcEEEEEEEEEECCcEEEEEEEeEEEEECCCCHHHHHHHHhcCCCCc
Confidence 9999999999999999999999999999999999999999999876553 5889999999999999999999999 588
Q ss_pred C
Q psy14704 162 L 162 (162)
Q Consensus 162 ~ 162 (162)
+
T Consensus 153 ~ 153 (199)
T PRK02478 153 L 153 (199)
T ss_pred c
Confidence 5
No 25
>PRK14365 Maf-like protein; Provisional
Probab=100.00 E-value=1.3e-50 Score=321.85 Aligned_cols=141 Identities=39% Similarity=0.579 Sum_probs=133.0
Q ss_pred cEEEecCCHHHHHHHHhC-CCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEE
Q psy14704 13 KIVLASSSPRRSQILKSI-GLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVV 91 (162)
Q Consensus 13 ~iILAS~SprR~~lL~~~-g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV 91 (162)
+|||||+||||++||+++ |++|+++|++|| |+..+.. +|.+||.++|..||++|++++ ++.+||||||||
T Consensus 3 ~iILaSsSprR~elL~~~~g~~f~vi~~~id-E~~~~~~---~p~~~v~~lA~~KA~~v~~~~-----~~~~vI~aDTvV 73 (197)
T PRK14365 3 RIILASASPRRKELLKQLIGDNFLVYPSSYE-EPPQPGL---DPEELLLKHSLEKARDVAKHF-----DSGIIISADTSV 73 (197)
T ss_pred CEEEeCCCHHHHHHHhcCcCcCeEEECCCCC-CCCCCCC---CHHHHHHHHHHHHHHHHHHhC-----CCCEEEEeCeEE
Confidence 699999999999999995 999999999999 9887777 899999999999999999887 478999999999
Q ss_pred eeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEEC--CcceEEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 92 SINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTK--DKDSRFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 92 ~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~--~~~~~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
+++|+|+|||.|.+||++||+.|||++|+|||||||++. +....++++|+|+|+++|+++|++||++|||+
T Consensus 74 ~~~g~Il~KP~~~~eA~~~L~~lsg~~h~v~T~v~l~~~~~~~~~~~~~~T~V~f~~l~~~~I~~Yv~~~e~~ 146 (197)
T PRK14365 74 FCNGEVLGKPASPENAEEMLEKLSGRKFLVITGLTVLDLDSGKEISEIESTDVWMTELSREQILAYVRTGEPL 146 (197)
T ss_pred EECCEEecCCCCHHHHHHHHHHHCCCceEEEEEEEEEECCCCeEEEEEEEEEEEECCCCHHHHHHHHhcCCcc
Confidence 999999999999999999999999999999999999864 44568899999999999999999999999996
No 26
>PF02545 Maf: Maf-like protein; InterPro: IPR003697 Maf is a putative inhibitor of septum formation in eukaryotes, bacteria, and archaea. The Maf protein shares substantial amino acid sequence identity with the Escherichia coli OrfE protein [].; GO: 0005737 cytoplasm; PDB: 2P5X_A 1EXC_B 1EX2_A.
Probab=100.00 E-value=6.9e-51 Score=323.01 Aligned_cols=144 Identities=48% Similarity=0.736 Sum_probs=111.0
Q ss_pred CcEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCC-ceEEEeceE
Q psy14704 12 LKIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEP-DLIIGADTV 90 (162)
Q Consensus 12 ~~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~-~~vI~aDTv 90 (162)
|+|||||+||||++||+++|++|++++++|| |+....+. +|.+||.++|.+||+++..+.. ++ .+|||||||
T Consensus 1 M~iILaS~SprR~elL~~~g~~f~v~~~~~d-E~~~~~~~--~p~~~v~~lA~~Ka~~~~~~~~----~~~~~vi~aDTv 73 (195)
T PF02545_consen 1 MRIILASSSPRRRELLKQLGINFEVIPSDID-EDAIRKES--DPEEYVQRLAEAKAEAVVSKLY----PDSAIVIGADTV 73 (195)
T ss_dssp --EEE----HHHHHHHHCTT--EEE----------GCCSS--SHHHHHHHHHHHHHHHHHHCCH----CCHSEEEEEEEE
T ss_pred CCEEEeCCCHHHHHHHHHCCCCeEEEcCCCC-CCCCcccc--CHHHHHHHHHHHHHHHHHhhhc----ccceEEEEEeee
Confidence 5899999999999999999999999999999 98855441 6999999999999999777764 46 899999999
Q ss_pred EeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCcce--EEEEEEEEEEcCCCHHHHHHHHHcCCCC
Q psy14704 91 VSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDKDS--RFYNQTQVTFANLTPAVISAYVKTREPL 162 (162)
Q Consensus 91 V~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~~~--~~~~~t~V~F~~l~~~~I~~Yv~tgep~ 162 (162)
|++||+|+|||.|++||++||++|||++|+|+|||||+..+... .++++|+|+|+++|+++|++||++|||+
T Consensus 74 v~~~g~Il~KP~~~eeA~~~L~~lsg~~h~V~T~v~l~~~~~~~~~~~~~~t~V~F~~l~~~~I~~Yv~~ge~~ 147 (195)
T PF02545_consen 74 VVCDGEILGKPKDEEEAREMLKSLSGKTHQVYTGVCLINPDKGQIFYFVEVTKVKFRPLSDEEIEAYVESGEPL 147 (195)
T ss_dssp EECTTEEE-S-SSHHHHHHHHHHHTTSEEEEEEEEEEEECCECCCCEEEEEEEEEE----HHHHHHHHCCTCCC
T ss_pred eeeeeEEEeCCCCHHHHHHHHHhhCCCcEEEEEEEEEEECCCceEEeecCcEEEEEcCCCHHHHHHHHhhccCc
Confidence 99999999999999999999999999999999999999987644 5679999999999999999999999996
No 27
>KOG1509|consensus
Probab=100.00 E-value=8.1e-42 Score=267.64 Aligned_cols=157 Identities=41% Similarity=0.668 Sum_probs=144.1
Q ss_pred chhhhcCCCcEEEecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCC-CCc
Q psy14704 4 PYMGQLNNLKIVLASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNV-EPD 82 (162)
Q Consensus 4 ~~~~~l~~~~iILAS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~-~~~ 82 (162)
|....++.++|||||+||||++|++.+|++|++++|+|+ |++++..|. +|.+|+..+|.+||.+|.+++++... ...
T Consensus 2 ~~~~~~~~~riiL~S~s~rrk~i~~~~G~~~~~~~S~fe-Enl~k~~~~-~p~~yv~~tA~~KA~~I~erL~~~Ed~~~~ 79 (209)
T KOG1509|consen 2 PVKAMLKGKRIILASASPRRKQILAEMGLNLEVVVSTFE-ENLIKSSFE-TPEDYVVETAKQKAEEIIERLGDGEDSFPD 79 (209)
T ss_pred cchhhhcCcEEEEecCCchHHHHHHHcCCceEEEeccch-hhchhhccC-CHHHHHHHHHHHHHHHHHHHhhccccCCcc
Confidence 667788999999999999999999999999999999999 999998554 89999999999999999999874322 267
Q ss_pred eEEEeceEEeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCc----c-eEEEEEEEEEEcCCCHHHHHHHHH
Q psy14704 83 LIIGADTVVSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDK----D-SRFYNQTQVTFANLTPAVISAYVK 157 (162)
Q Consensus 83 ~vI~aDTvV~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~----~-~~~~~~t~V~F~~l~~~~I~~Yv~ 157 (162)
+||+||||+..+++|+|||.|+++|.+||++|||+.|.|+|||+|.+... + ..|+++|+|+|.+++++.|+.||+
T Consensus 80 ~vi~adtI~~~~~~Iyekp~d~~~a~~~l~rl~~~~~~v~t~v~l~~~~~~~g~~~~~~~d~t~VyF~eIpee~ie~yV~ 159 (209)
T KOG1509|consen 80 VVISADTITTDGGEIYEKPVDKKDAKRMLKRLSGRPHSVFTGVALIHCSSQLGTRVSEFYDETKVYFGEIPEEVIEEYVD 159 (209)
T ss_pred ccccccEEEEeccEEecCCCChhHHHHHHHHhcCCCcceeeeEEEEEecccCCceeecceeeeEEEeccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997653 2 379999999999999999999999
Q ss_pred cCCCC
Q psy14704 158 TREPL 162 (162)
Q Consensus 158 tgep~ 162 (162)
+|+|+
T Consensus 160 sG~~l 164 (209)
T KOG1509|consen 160 SGEPL 164 (209)
T ss_pred cCCch
Confidence 99986
No 28
>cd00985 Maf_Ham1 Maf_Ham1. Maf, a nucleotide binding protein, has been implicated in inhibition of septum formation in eukaryotes, bacteria and archaea. A Ham1-related protein from Methanococcus jannaschii is a novel NTPase that has been shown to hydrolyze nonstandard nucleotides, such as hypoxanthine/xanthine NTP, but not standard nucleotides.
Probab=100.00 E-value=8.5e-33 Score=205.37 Aligned_cols=121 Identities=38% Similarity=0.478 Sum_probs=112.5
Q ss_pred EEEecCCHHHHHHHHhCC-CCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEEe
Q psy14704 14 IVLASSSPRRSQILKSIG-LKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVVS 92 (162)
Q Consensus 14 iILAS~SprR~~lL~~~g-~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV~ 92 (162)
|||||+||||+++|+++| ++|+++++++| |+..+. .|.+++.++|..||+++++.+ ++.+||++||+|+
T Consensus 1 iiLaS~s~~R~~~l~~~~~~~~~~~~~~i~-E~~~~~----~~~~~~~~~A~~Ka~~~~~~~-----~~~~vI~~Dt~v~ 70 (131)
T cd00985 1 LILASGSPRRLEELKQIGGIEFEVLPSDID-ETGLKG----EPEDTVEELALLKARAVAERL-----PDAPVIADDTGLV 70 (131)
T ss_pred CEEecCChHHHHHHHhcCCCCEEEeCCCCC-CCCCCC----CHHHHHHHHHHHHHHHHHHHC-----CCCEEEECCcEEE
Confidence 699999999999999999 99999999999 887654 399999999999999999987 3579999999999
Q ss_pred eCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECC-cceEEEEEEEEEE
Q psy14704 93 INDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKD-KDSRFYNQTQVTF 144 (162)
Q Consensus 93 ~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~-~~~~~~~~t~V~F 144 (162)
+||+++|||.+.++|.+||+.++|++|+|+||+|++.++ ....++.+|+|+|
T Consensus 71 ~~g~~~~kp~~~~~a~~~l~~~~~r~~~~~t~v~l~~~~~~~~~~~~~t~~~~ 123 (131)
T cd00985 71 VDGRPGGKPARFAEALEMLRGLSGRTAEFVTAVALVDPDGKIITFEGETEGKI 123 (131)
T ss_pred ECCEeCcCCCCHHHHHHHHhhcCCCEEEEEEEEEEEECCCcEEEEEEEEEEEE
Confidence 999999999999999999999999999999999999876 4568999999999
No 29
>cd00515 HAM1 NTPase/HAM1. This family consists of the HAM1 protein and pyrophosphate-releasing xanthosine/ inosine triphosphatase. HAM1 protects the cell against mutagenesis by the base analog 6-N-hydroxylaminopurine (HAP) in E. Coli and S. cerevisiae. A Ham1-related protein from Methanococcus jannaschii is a novel NTPase that has been shown to hydrolyze nonstandard nucleotides such as XTP to XMP and ITP to IMP, but not the standard nucleotides, in the presence of Mg or Mn ions. The enzyme exists as a homodimer. The HAM1 protein may be acting as an NTPase by hydrolyzing the HAP triphosphate.
Probab=96.71 E-value=0.08 Score=41.62 Aligned_cols=101 Identities=19% Similarity=0.306 Sum_probs=64.4
Q ss_pred EEEecCCHHHHHH----HHhCCCCeEEec--CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEe
Q psy14704 14 IVLASSSPRRSQI----LKSIGLKFEVIP--SNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGA 87 (162)
Q Consensus 14 iILAS~SprR~~l----L~~~g~~f~v~~--~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~a 87 (162)
|++||+.+.-.+= |..+|++....+ .+++ |.. . + ...+|..||+.+++.+ +.+||+=
T Consensus 1 i~~aT~N~~K~~E~~~il~~~~i~v~~~~~~~~~~-E~~---~---s----~~enA~~KA~~a~~~~------~~pviad 63 (183)
T cd00515 1 IVFATGNKGKLKEFKEILAPFGIEVVSLKDIIDIE-ETG---S---T----FEENALLKARAAAEAL------GLPVLAD 63 (183)
T ss_pred CEEECCCHHHHHHHHHHHhhcCcEEEEcCcCCCCC-CCC---C---C----HHHHHHHHHHHHHHHH------CCCEEEe
Confidence 5778888776543 443444433333 2333 332 1 2 3456888999999887 3589999
Q ss_pred ceEEeeC---C-------EEecCCCCHHHHHHHHHHcCC---CeEEEEEEEEEEECC
Q psy14704 88 DTVVSIN---D-------MMLGKPEDEEEAKEFLSKLSG---NTHSVFTGVAILTKD 131 (162)
Q Consensus 88 DTvV~~~---g-------~IlgKP~~~~eA~~~L~~lsG---~~h~V~Tgv~l~~~~ 131 (162)
||=..++ | +..|.-.+.+....+|..|++ |.....+.+|+..++
T Consensus 64 DsGL~i~aL~g~PG~ys~r~~~~~~~~~~~~~ll~~l~~~~~r~A~~~~~i~~~~~~ 120 (183)
T cd00515 64 DSGLCVDALNGFPGVYSARFAGEHDDAENNEKLLELLEGDEDRSAYFVCVIALVDPD 120 (183)
T ss_pred ccEEEEeccCCCCchhhhhhcCCCCHHHHHHHHHHHccCCCCCeEEEEEEEEEEeCC
Confidence 9987665 3 233321345677778888875 788888888887654
No 30
>PRK14824 putative deoxyribonucleotide triphosphate pyrophosphatase; Provisional
Probab=96.51 E-value=0.13 Score=41.10 Aligned_cols=102 Identities=23% Similarity=0.341 Sum_probs=65.9
Q ss_pred cEEEecCCHHHHHHHHh-CC-CCeEEecCC----CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEE
Q psy14704 13 KIVLASSSPRRSQILKS-IG-LKFEVIPSN----FDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIG 86 (162)
Q Consensus 13 ~iILAS~SprR~~lL~~-~g-~~f~v~~~~----~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~ 86 (162)
+|++||+-+.-.+=++. ++ +.+++++.. ++ |+- . + -..+|..||+.+++.. +.+||+
T Consensus 2 ~i~~aT~N~~K~~E~~~iL~~~~i~v~~~~~~~e~~-E~~---~---t----f~eNA~~KA~~~~~~~------~~pvia 64 (201)
T PRK14824 2 KILLATTNEGKVREIKRLLSDLGIEVLSPDKKIEVE-EDG---E---T----FLENAYLKARAYAEFY------KIPVLA 64 (201)
T ss_pred EEEEECCChHHHHHHHHHHhhcCCEEEEcCcCCCCC-CCC---C---C----HHHHHHHHHHHHHHHH------CCCEEE
Confidence 69999999987554443 22 234554432 22 221 1 2 3456889999999887 357999
Q ss_pred eceEEeeC---C-------EEe-----cC-----CCCHHHHHHHHHHcCC---CeEEEEEEEEEEECC
Q psy14704 87 ADTVVSIN---D-------MML-----GK-----PEDEEEAKEFLSKLSG---NTHSVFTGVAILTKD 131 (162)
Q Consensus 87 aDTvV~~~---g-------~Il-----gK-----P~~~~eA~~~L~~lsG---~~h~V~Tgv~l~~~~ 131 (162)
=||=..++ | +.. |. ..+......+|..|.| |..+..|.+|+..++
T Consensus 65 DDSGL~vdAL~G~PGvysar~~~~~~~g~~~~~~~~d~~~~~~ll~~l~~~~~R~A~f~c~ia~~~~~ 132 (201)
T PRK14824 65 DDSGLEVPALEGYPGVYSSRFYQIEFGGKEEVVESKDEANIRKLLRLLEGKQNRKARFVAFVVLYFGD 132 (201)
T ss_pred eccEEEecccCCCCceeeHHHhhhcccCccccccCCHHHHHHHHHHHccCCCCCcEEEEEEEEEEECC
Confidence 99977654 4 222 21 2355667778888876 778888888887543
No 31
>PRK14821 putative deoxyribonucleotide triphosphate pyrophosphatase; Provisional
Probab=96.47 E-value=0.21 Score=39.31 Aligned_cols=102 Identities=21% Similarity=0.191 Sum_probs=63.6
Q ss_pred CcEEEecCCHHHHH----HHHhCCCCeEEecCC--CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEE
Q psy14704 12 LKIVLASSSPRRSQ----ILKSIGLKFEVIPSN--FDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLII 85 (162)
Q Consensus 12 ~~iILAS~SprR~~----lL~~~g~~f~v~~~~--~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI 85 (162)
|+|++||+-+...+ ||..+| +++.+.. ++ |.. .. +. ..+|..||+.+++.+ +.+||
T Consensus 1 m~i~~aT~N~~K~~E~~~il~~~~--i~v~~~~~~~~-E~~--~~---t~----~enA~~KA~~~~~~~------~~pvl 62 (184)
T PRK14821 1 MKIYFATGNKGKVEEAKIILKPLG--IEVEQIKIEYP-EIQ--AD---TL----EEVAAFGAKWVYNKL------NRPVI 62 (184)
T ss_pred CEEEEECCChhHHHHHHHHHhhcC--cEEEECCCCCC-CCC--CC---CH----HHHHHHHHHHHHHHH------CCCEE
Confidence 36999999988754 444445 4444433 22 211 11 33 346888999999887 35799
Q ss_pred EeceEEee---CCE--EecCCC-CHHHHHHHHHHcCC---CeEEEEEEEEEEECC
Q psy14704 86 GADTVVSI---NDM--MLGKPE-DEEEAKEFLSKLSG---NTHSVFTGVAILTKD 131 (162)
Q Consensus 86 ~aDTvV~~---~g~--IlgKP~-~~~eA~~~L~~lsG---~~h~V~Tgv~l~~~~ 131 (162)
+=||=+.+ +|. |+-|-. +......+|..|+| |..+..+.+|+..++
T Consensus 63 aDDSGL~v~aL~g~PGvysa~~~~~~~~~~ll~~l~~~~~R~A~f~~~ia~~~~~ 117 (184)
T PRK14821 63 VEDSGLFIEALNGFPGPYSAFVYKTLGNEGILKLLEGEENRRAYFKSVIGYCDPG 117 (184)
T ss_pred EEcCEEeehhhCCCCcHHHHHHHHHHHHHHHHHHccCCCCCeEEEEEEEEEEECC
Confidence 99996654 442 211111 34455667888876 678888888887543
No 32
>PRK14823 putative deoxyribonucleoside-triphosphatase; Provisional
Probab=96.39 E-value=0.21 Score=39.66 Aligned_cols=101 Identities=19% Similarity=0.258 Sum_probs=65.7
Q ss_pred cEEEecCCHHHHHHHHh-CCCCeEEecC-------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceE
Q psy14704 13 KIVLASSSPRRSQILKS-IGLKFEVIPS-------NFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLI 84 (162)
Q Consensus 13 ~iILAS~SprR~~lL~~-~g~~f~v~~~-------~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~v 84 (162)
+|++||+-+.-.+=++. ++-.+++++. +++ |+ +. + -..+|..||+++++.+ +.+|
T Consensus 2 ki~~aT~N~~K~~E~~~il~~~~~v~~~~~~~~~~~~~-E~---~~---t----f~enA~~KA~~~~~~~------~~pv 64 (191)
T PRK14823 2 KLVFATNNKHKLEEIRSILPEKIELLSLSDIGCHEDIP-ET---AD---T----LEGNALLKAEYVYKKY------GYDC 64 (191)
T ss_pred EEEEECCChhHHHHHHHHhcCCCEEEehhhcCCCCCCC-CC---CC---C----HHHHHHHHHHHHHHHH------CCCE
Confidence 69999999987655553 4433555522 222 32 11 2 3456889999999887 3579
Q ss_pred EEeceEEeeC---C-------EEecCCC-CHHHHHHHHHHcCC---CeEEEEEEEEEEEC
Q psy14704 85 IGADTVVSIN---D-------MMLGKPE-DEEEAKEFLSKLSG---NTHSVFTGVAILTK 130 (162)
Q Consensus 85 I~aDTvV~~~---g-------~IlgKP~-~~~eA~~~L~~lsG---~~h~V~Tgv~l~~~ 130 (162)
|+-||=..++ | +..|... +.+.-..+|..|.| |..+..+.+|+...
T Consensus 65 laDDSGL~v~aL~G~PGvysar~~g~~~~~~~~~~~ll~~l~~~~~R~A~f~c~i~~~~~ 124 (191)
T PRK14823 65 FADDTGLEVEALNGAPGVYSARYAGGEHNAEANMRKLLEELEGKDNRKAQFRTVIALILD 124 (191)
T ss_pred EEecCEEEEeccCCCcchHHHHHhCcCCCHHHHHHHHHHHccCCCCCcEEEEEEEEEEeC
Confidence 9999977654 4 3455433 34444667888876 77888888888753
No 33
>COG0127 Xanthosine triphosphate pyrophosphatase [Nucleotide transport and metabolism]
Probab=95.79 E-value=0.63 Score=37.17 Aligned_cols=109 Identities=21% Similarity=0.240 Sum_probs=70.9
Q ss_pred CcEEEecCCHHHHH----HHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEe
Q psy14704 12 LKIVLASSSPRRSQ----ILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGA 87 (162)
Q Consensus 12 ~~iILAS~SprR~~----lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~a 87 (162)
++|++||+=+--.. ||...|++++.....-+ |- ... .....-...|..||+++++.. +.++|+=
T Consensus 2 ~ki~~AT~N~~K~~E~~~il~~~~~ei~~~~~~~~-~~-e~e----Etg~tf~enA~~Ka~~~a~~~------g~pviaD 69 (194)
T COG0127 2 MKIVLATGNKGKLRELKSILAPGGIEIESLKELGV-EI-EVE----ETGLTFEENALLKARAAAKAT------GLPVIAD 69 (194)
T ss_pred cEEEEEcCChHHHHHHHHHhcccCceEEEccccCC-CC-Ccc----chhhHHHHHHHHHHHHHHhhc------CCcEEEe
Confidence 57999998887644 33443344443333222 21 111 234556677999999998875 6789999
Q ss_pred ceEEee---CC-------EEecCCCCHHHHHHHHHHcCC---CeEEEEEEEEEEECCc
Q psy14704 88 DTVVSI---ND-------MMLGKPEDEEEAKEFLSKLSG---NTHSVFTGVAILTKDK 132 (162)
Q Consensus 88 DTvV~~---~g-------~IlgKP~~~~eA~~~L~~lsG---~~h~V~Tgv~l~~~~~ 132 (162)
||=... || +..|-..|.......|+.|+| |+.+.+|.+++...+.
T Consensus 70 DSGL~v~aL~G~PGvYSar~~~~~~d~~~~~klL~~l~~~~~R~A~F~~vi~~~~~~~ 127 (194)
T COG0127 70 DSGLCVDALNGFPGVYSARFAGEADDTIGNEKLLKLLEGVPDRSAYFVCVIVLARDGG 127 (194)
T ss_pred cCceEEeccCCCCcceeehhcccCchhhhHHHHHHHhcCCCCceEEEEEEEEEEeCCC
Confidence 996654 44 456655566777778888884 4778888888866544
No 34
>PF01725 Ham1p_like: Ham1 family; InterPro: IPR002637 This family contains the Saccharomyces cerevisiae (Baker's yeast) HAM1 protein P47119 from SWISSPROT and other hypothetical archaeal, bacterial and Caenorhabditis elegans proteins. S. cerevisiae HAM1 protects against the mutagenic effects of the base analog 6-N-hydroxylaminopurine (HAP) which can be a natural product of monooxygenase activity on adenine. HAM1 protein protects the cell from HAP, either on the level of deoxynucleoside triphosphate or the DNA level by a yet unidentified set of reactions [].; GO: 0016787 hydrolase activity; PDB: 3TQU_A 1VP2_B 3S86_D 1B78_A 2MJP_B 2Q16_A 2PYU_A 1K7K_A 2ZTI_A 2DVP_A ....
Probab=95.59 E-value=0.3 Score=38.47 Aligned_cols=102 Identities=23% Similarity=0.325 Sum_probs=61.2
Q ss_pred EEEecCCHHHHHHHHh-CC-CCeEEe------c--CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCce
Q psy14704 14 IVLASSSPRRSQILKS-IG-LKFEVI------P--SNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDL 83 (162)
Q Consensus 14 iILAS~SprR~~lL~~-~g-~~f~v~------~--~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~ 83 (162)
|++||+-+...+=++. ++ +.++++ . .+++ |+ +. ++ ..+|..||+.+++.+ +.+
T Consensus 1 i~~aT~N~~K~~E~~~~l~~~~i~v~~~~~~~~~~~~~~-E~---~~---t~----~enA~~KA~~~~~~~------~~p 63 (189)
T PF01725_consen 1 IIFATGNKGKIREIQELLKPLGIEVISLIDLPEPDPEPE-ET---GE---TF----EENALIKAKAAAQQL------GKP 63 (189)
T ss_dssp EEEE-S-HHHHHHHHHHCTTTTEEEEECEEECEE-------B---SS---SH----HHHHHHHHHHHHHHH------SSS
T ss_pred CEEEcCCHHHHHHHHHHHhhcCCcEEeHHHcCccCcCCC-cC---CC---CH----HHHHHHHHHHHHHHh------CCC
Confidence 6788888876554443 22 223332 1 2333 33 22 44 456788999999987 356
Q ss_pred EEEeceEEeeC---CE--EecCCC------CHHHHHHHHHHcCC---CeEEEEEEEEEEECCc
Q psy14704 84 IIGADTVVSIN---DM--MLGKPE------DEEEAKEFLSKLSG---NTHSVFTGVAILTKDK 132 (162)
Q Consensus 84 vI~aDTvV~~~---g~--IlgKP~------~~~eA~~~L~~lsG---~~h~V~Tgv~l~~~~~ 132 (162)
||+-||=..++ |. ++-|-. +.......|+.++| +.....|.+|++.++.
T Consensus 64 vi~dDSGL~v~aL~g~PG~~s~r~~g~~~~~~~~~~~ll~~l~~~~~R~A~~~~~ia~~~~~~ 126 (189)
T PF01725_consen 64 VIADDSGLEVDALNGFPGVYSARFAGPEATDEEGNEKLLKLLSGLEDRRAYFRCVIALADPDG 126 (189)
T ss_dssp EEEEEEEEEEGGGTTTBGGGHCCCC-TTS-HHHHHHHHHHHTTTSSG-EEEEEEEEEEEETTT
T ss_pred EEEeCcEEeHhhhCCCcCCceEEEecCCCCHHHHHHHHHHHhcCCCCCeEEEEEEEEEEECCC
Confidence 99999988765 42 222333 46666667777776 4678889999998766
No 35
>PRK14822 nucleoside-triphosphatase; Provisional
Probab=95.54 E-value=0.97 Score=36.12 Aligned_cols=105 Identities=20% Similarity=0.296 Sum_probs=65.9
Q ss_pred cEEEecCCHHHHHHHHh-CC-CCeEEecCC-CC-CCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEe
Q psy14704 13 KIVLASSSPRRSQILKS-IG-LKFEVIPSN-FD-ESSIPV-SKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGA 87 (162)
Q Consensus 13 ~iILAS~SprR~~lL~~-~g-~~f~v~~~~-~d-eE~~~~-~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~a 87 (162)
+|++||+-+.-.+=++. ++ +.+++++.. +. ...... +. + ...+|..||+++++.+ +.++|+-
T Consensus 3 ~i~~aT~N~~K~~E~~~iL~~~~~~i~~~~~~~~~~e~~E~g~---t----~~enA~~KA~~~~~~~------~~pviaD 69 (200)
T PRK14822 3 EIVIATKNKGKVREFKEIFEKFDIEVKSLADFPPIPEVEETGT---T----FEENAILKAEAAAKAL------NKPVIAD 69 (200)
T ss_pred eEEEECCCHHHHHHHHHHHhhcCcEEEEchhcCCCCCCCCCCC---C----HHHHHHHHHHHHHHHH------CCCEEEe
Confidence 69999999987654443 22 234444332 11 011111 11 3 3456889999999887 3579999
Q ss_pred ceEEeeC---C-------EEecC-CCCHHHHHHHHHHcCC-----CeEEEEEEEEEEEC
Q psy14704 88 DTVVSIN---D-------MMLGK-PEDEEEAKEFLSKLSG-----NTHSVFTGVAILTK 130 (162)
Q Consensus 88 DTvV~~~---g-------~IlgK-P~~~~eA~~~L~~lsG-----~~h~V~Tgv~l~~~ 130 (162)
||=..++ | +..|. ..|.+....+|..|.| |..+..|.+|+..+
T Consensus 70 DSGL~v~AL~G~PGvysar~~g~~~~d~~~~~~ll~~l~~~~~~~R~A~f~~~ia~~~~ 128 (200)
T PRK14822 70 DSGLEVDALNGAPGVYSARYAGEAKDDAANNEKLLKELGGVPFEKRTARFHCVIAVAFP 128 (200)
T ss_pred ccEEEEcccCCCCceechhhcCCCCCHHHHHHHHHHHhhCCCCCCCcEEEEEEEEEEeC
Confidence 9977654 4 34443 1356667778888876 46788888888754
No 36
>PRK00120 dITP/XTP pyrophosphatase; Reviewed
Probab=95.50 E-value=0.98 Score=35.96 Aligned_cols=105 Identities=20% Similarity=0.326 Sum_probs=65.8
Q ss_pred CcEEEecCCHHHHH----HHHhCCCCeEEecC-CCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEE
Q psy14704 12 LKIVLASSSPRRSQ----ILKSIGLKFEVIPS-NFDE-SSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLII 85 (162)
Q Consensus 12 ~~iILAS~SprR~~----lL~~~g~~f~v~~~-~~de-E~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI 85 (162)
++|++||+-+...+ ||..+|+ ++++. +++- |-...+. +. ..+|..||+.+++.+ +.+||
T Consensus 1 m~i~~aT~N~~K~~E~~~il~~~~~--~i~~~~~~~~~e~~E~~~---s~----~enA~~KA~~~~~~~------~~pvi 65 (196)
T PRK00120 1 MKIVLASHNAGKLRELKALLAPFGI--EVVSQGELGVPEPEETGT---TF----VENALIKARHAAKAT------GLPAL 65 (196)
T ss_pred CEEEEEcCCHHHHHHHHHHHhhcCC--EEEehhhcCCCCCCCCCC---CH----HHHHHHHHHHHHHHH------CCCEE
Confidence 36999999988754 4444454 44433 2320 1111112 33 456888999999887 34799
Q ss_pred EeceEEeeC---C-------EEecC-CCCHHHHHHHHHHcCC-----CeEEEEEEEEEEECC
Q psy14704 86 GADTVVSIN---D-------MMLGK-PEDEEEAKEFLSKLSG-----NTHSVFTGVAILTKD 131 (162)
Q Consensus 86 ~aDTvV~~~---g-------~IlgK-P~~~~eA~~~L~~lsG-----~~h~V~Tgv~l~~~~ 131 (162)
+-||=..++ | +..|. ..+.+....+|..|+| |+.+..|.+|+..++
T Consensus 66 aDDSGL~i~aL~g~PGvysar~~g~~~~~~~~~~~ll~~l~~~~~~~R~A~~~~~i~~~~~~ 127 (196)
T PRK00120 66 ADDSGLCVDALGGAPGVYSARYAGEGASDAANNEKLLEELKGVPDEDRRARFVCVLVLVRPD 127 (196)
T ss_pred EEcCEEEEcccCCCCchhhHHHhCcCCCHHHHHHHHHHHhhCCCCCCCcEEEEEEEEEEECC
Confidence 999977665 3 33442 1255566677887765 678888888888643
No 37
>PRK02491 putative deoxyribonucleotide triphosphate pyrophosphatase/unknown domain fusion protein; Reviewed
Probab=95.33 E-value=0.53 Score=40.48 Aligned_cols=104 Identities=16% Similarity=0.280 Sum_probs=65.1
Q ss_pred CCcEEEecCCHHHHH----HHHhCCCCeEEecCC----CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q psy14704 11 NLKIVLASSSPRRSQ----ILKSIGLKFEVIPSN----FDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPD 82 (162)
Q Consensus 11 ~~~iILAS~SprR~~----lL~~~g~~f~v~~~~----~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~ 82 (162)
..+|++||+-+.-.+ ||..+| +++++.. .. |-...+. + -...|..||+++++.+ +.
T Consensus 127 ~~kIv~AT~N~~K~~E~~~iL~~~~--iev~~l~~~~~~~-Ei~Etg~---T----f~ENA~~KA~~aa~~~------g~ 190 (328)
T PRK02491 127 GDTILIATRNEGKTKEFRKLFGKLG--YKVENLNDYPDLP-EVAETGM---T----FEENARLKAETISRLT------GK 190 (328)
T ss_pred CCeEEEEcCChhHHHHHHHHHhhcC--cEEEehhhcCCCC-CcCCCCC---C----HHHHHHHHHHHHHHHH------CC
Confidence 357999999998754 444444 4544333 11 2111111 3 3456889999999887 34
Q ss_pred eEEEeceEEee---CC-------EEecCC-CCHHHHHHHHHHcC------CCeEEEEEEEEEEEC
Q psy14704 83 LIIGADTVVSI---ND-------MMLGKP-EDEEEAKEFLSKLS------GNTHSVFTGVAILTK 130 (162)
Q Consensus 83 ~vI~aDTvV~~---~g-------~IlgKP-~~~~eA~~~L~~ls------G~~h~V~Tgv~l~~~ 130 (162)
+||+=||=..+ +| +..|.. .+.+...++|..|. .|+.+..|.+|+..+
T Consensus 191 pvLADDSGL~VdAL~G~PGvySARfaG~~~~d~~n~~kLL~~L~~~~~~~dR~A~Fvc~lal~~~ 255 (328)
T PRK02491 191 MVLADDSGLKVDALGGLPGVWSARFSGPDATDAENNAKLLHELAMVFDLKDRSAQFHTTLVVAAP 255 (328)
T ss_pred CEEEEccEEEEcccCCCCcccchhhcCCCCCHHHHHHHHHHHhhCCCCCCCCcEEEEEEEEEEeC
Confidence 79999997654 44 345643 34455556777774 477888898888754
No 38
>PRK14825 putative deoxyribonucleotide triphosphate pyrophosphatase; Provisional
Probab=93.73 E-value=2.9 Score=33.36 Aligned_cols=105 Identities=20% Similarity=0.313 Sum_probs=65.6
Q ss_pred cEEEecCCHHHHHHHHh-CC-CCeEEe-cCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEec
Q psy14704 13 KIVLASSSPRRSQILKS-IG-LKFEVI-PSNFD-ESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGAD 88 (162)
Q Consensus 13 ~iILAS~SprR~~lL~~-~g-~~f~v~-~~~~d-eE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aD 88 (162)
+|++||+-+.-.+=++. ++ ..+++. ..++| +|+- . + -..+|..||+.+++.+. .+.+||+=|
T Consensus 3 ~i~~aT~N~~K~~E~~~il~~~~~~i~~~~~~~~~E~~---~---t----f~enA~~KA~~~~~~~~----~~~pvlaDD 68 (199)
T PRK14825 3 TLFFATTNINKINEVKQILDIPNIKIEIPQNFDIKETG---K---T----FKENSLLKAKALFEILN----NKQPVFSED 68 (199)
T ss_pred eEEEECCChhHHHHHHHHHhhcCceEeecccCCCCCCC---C---C----HHHHHHHHHHHHHHHHC----CCCcEEEec
Confidence 69999999877554443 33 233332 22222 0321 1 2 34568899999998773 235799999
Q ss_pred eEEee---CC-------EE----ecCC-CCHHHHHHHHHHcCC---CeEEEEEEEEEEECC
Q psy14704 89 TVVSI---ND-------MM----LGKP-EDEEEAKEFLSKLSG---NTHSVFTGVAILTKD 131 (162)
Q Consensus 89 TvV~~---~g-------~I----lgKP-~~~~eA~~~L~~lsG---~~h~V~Tgv~l~~~~ 131 (162)
|=..+ +| +. +|+- .+.+....+|..|.| |..+..|.+|++.++
T Consensus 69 SGL~vdAL~G~PGvysar~~~~~~G~~~~~~~~~~~lL~~l~~~~~R~A~f~~~l~~~~~~ 129 (199)
T PRK14825 69 SGLCIEALNLEPGIYSKRYDQYKLGKKLSTNEKNHLIIDLMKNEKNRTAYFICNISYISKD 129 (199)
T ss_pred CeEEEhhhCCCCceeeHhhhhhccCCCCCHHHHHHHHHHHcCCCCCCcEEEEEEEEEEECC
Confidence 96655 44 22 2543 345556778888876 778889999888644
No 39
>TIGR00042 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family. Saccharomyces cerevisiae HAM1 protects against the mutagenic effects of the base analog 6-N-hydroxylaminopurine, which can be a natural product of monooxygenase activity on adenine. Methanococcus jannaschii MJ0226 and E. coli RdgB are also characterized as pyrophosphatases active against non-standard purines NTPs. E. coli RdgB appears to act by intercepting non-canonical deoxyribonucleotide triphosphates from replication precursor pools.
Probab=93.68 E-value=2.8 Score=32.99 Aligned_cols=104 Identities=17% Similarity=0.247 Sum_probs=64.0
Q ss_pred cEEEecCCHHHHHHH----HhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEec
Q psy14704 13 KIVLASSSPRRSQIL----KSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGAD 88 (162)
Q Consensus 13 ~iILAS~SprR~~lL----~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aD 88 (162)
+|++||+.+...+=+ ..+|+. .+..++++ |-...+. +. ..+|..||+.+++.+ +.++|+-|
T Consensus 1 ~i~~aT~N~~K~~E~~~il~~~~~~-~~~~~~~~-~~ee~g~---t~----~enA~~KA~~~~~~~------~~pvlaDD 65 (184)
T TIGR00042 1 KIVFATGNPGKLKEVQSILSDLGDN-EIEQLDLG-YPEETGL---TF----EENALLKAKHAAKIL------NKPVIAED 65 (184)
T ss_pred CEEEECCCHHHHHHHHHHHhhcCCE-EEecccCC-CCCCCCC---CH----HHHHHHHHHHHHHHh------CCCeEEcc
Confidence 488999998875444 334432 22234443 2111222 33 446888999999887 35799999
Q ss_pred eEEeeC---CE--EecCC---CCHHHHHHHHHHcCC---CeEEEEEEEEEEECC
Q psy14704 89 TVVSIN---DM--MLGKP---EDEEEAKEFLSKLSG---NTHSVFTGVAILTKD 131 (162)
Q Consensus 89 TvV~~~---g~--IlgKP---~~~~eA~~~L~~lsG---~~h~V~Tgv~l~~~~ 131 (162)
|=..++ |. ++-|. .+.+....+|..|.| |.....+.+|+..++
T Consensus 66 SGL~v~AL~G~PGvysar~~~~d~~~~~~ll~~l~~~~~R~A~f~~~l~~~~~~ 119 (184)
T TIGR00042 66 SGLFVDALNGFPGIYSARYQGTDIGNLEKILKLLEGVENRQAYFVCVIGYCDPN 119 (184)
T ss_pred cEEEEhhcCCCcchhhHHHhcChHHHHHHHHHHcCCCCCCcEEEEEEEEEEeCC
Confidence 977654 42 11111 234444778888876 778888999888643
No 40
>PRK14826 putative deoxyribonucleotide triphosphate pyrophosphatase; Provisional
Probab=90.99 E-value=4.9 Score=32.62 Aligned_cols=108 Identities=19% Similarity=0.286 Sum_probs=65.9
Q ss_pred CCCcEEEecCCHHHHH----HHHhCCCCeEEec-----C--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCC
Q psy14704 10 NNLKIVLASSSPRRSQ----ILKSIGLKFEVIP-----S--NFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDN 78 (162)
Q Consensus 10 ~~~~iILAS~SprR~~----lL~~~g~~f~v~~-----~--~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~ 78 (162)
...+|++||+-+.-.. ||..++-.+++++ . ++. |+- . + -..+|..||+.+++.++..
T Consensus 7 ~~~~i~~aT~N~~K~~E~~~iL~~~~~~i~v~~~~~~~~~~~~~-E~~---~---t----f~eNA~~KA~~~~~~~~~~- 74 (222)
T PRK14826 7 ETITIVLATGNRDKVRELRPLLEHISPLFSVRSLADLGVEVDIE-ETE---E---T----LEGNALLKADAIFELLSDR- 74 (222)
T ss_pred CCCEEEEEcCChhHHHHHHHHHHhcCCCeEEEehhHcCCCCCCC-CCC---C---C----HHHHHHHHHHHHHHHhCCc-
Confidence 3568999999987654 4444421345544 1 222 221 1 2 2346888999998877310
Q ss_pred CCCceEEEeceEEee---CC-------EEe----cCC-CCHHHHHHHHHHcCC---CeEEEEEEEEEEE
Q psy14704 79 VEPDLIIGADTVVSI---ND-------MML----GKP-EDEEEAKEFLSKLSG---NTHSVFTGVAILT 129 (162)
Q Consensus 79 ~~~~~vI~aDTvV~~---~g-------~Il----gKP-~~~~eA~~~L~~lsG---~~h~V~Tgv~l~~ 129 (162)
.+..+||+=||=..+ +| +.. |+- .+.+....+|..|.| |+.+..+.+|+..
T Consensus 75 ~~~~~vlaDDSGL~vdAL~G~PGvySarf~~~~~G~~~~d~~~~~~LL~~l~~~~~R~A~f~c~ia~~~ 143 (222)
T PRK14826 75 FPFLIALADDTGLEVDALGGAPGVYSARFAPVPEGEKPTYEDNVRHLLSEMEGKTERSARFRTVIALKG 143 (222)
T ss_pred ccCCcEEEecCcEEEcccCCCCceehHhhhhhccCCCcCHHHHHHHHHHHccCCCCCcEEEEEEEEEEE
Confidence 023589999997655 44 223 422 244446668888876 7788888888873
No 41
>COG4090 Uncharacterized protein conserved in archaea [Function unknown]
Probab=67.77 E-value=11 Score=28.53 Aligned_cols=42 Identities=29% Similarity=0.462 Sum_probs=34.4
Q ss_pred EEeceEEeeCCEEecCC-CCHHHHHHHHHHcCCCeEEEEEEEEEEE
Q psy14704 85 IGADTVVSINDMMLGKP-EDEEEAKEFLSKLSGNTHSVFTGVAILT 129 (162)
Q Consensus 85 I~aDTvV~~~g~IlgKP-~~~~eA~~~L~~lsG~~h~V~Tgv~l~~ 129 (162)
=.||+||.++|--+-|- .+.++|++.+..++++. +-|||..+
T Consensus 84 n~aDvvVLlGGLaMP~~gv~~d~~kel~ee~~~kk---liGvCfm~ 126 (154)
T COG4090 84 NSADVVVLLGGLAMPKIGVTPDDAKELLEELGNKK---LIGVCFMN 126 (154)
T ss_pred ccccEEEEEcccccCcCCCCHHHHHHHHHhcCCCc---eEEeeHHH
Confidence 34999999999877664 57899999999999993 46898864
No 42
>PF09897 DUF2124: Uncharacterized protein conserved in archaea (DUF2124); InterPro: IPR009183 There are currently no experimental data for members of this group of archaeal proteins, nor do they exhibit features indicative of any function.; PDB: 2R47_D.
Probab=64.04 E-value=6.3 Score=30.20 Aligned_cols=40 Identities=23% Similarity=0.454 Sum_probs=33.3
Q ss_pred eceEEeeCCEEecC-CCCHHHHHHHHHHcCCCeEEEEEEEEEEE
Q psy14704 87 ADTVVSINDMMLGK-PEDEEEAKEFLSKLSGNTHSVFTGVAILT 129 (162)
Q Consensus 87 aDTvV~~~g~IlgK-P~~~~eA~~~L~~lsG~~h~V~Tgv~l~~ 129 (162)
+|.||.++|--+-| +.+.+++.+++.+++++. +-|||..+
T Consensus 81 ~D~vVlmGGLAMP~~~v~~e~v~~li~ki~~~~---iiGiCFms 121 (147)
T PF09897_consen 81 PDVVVLMGGLAMPKSGVTPEDVNELIKKISPKK---IIGICFMS 121 (147)
T ss_dssp EEEEEEEGGGGSTTTS--HHHHHHHHHHHEEEE---EEEEEETT
T ss_pred CCEEEEEcccccCCCCCCHHHHHHHHHHhCcCC---EEEEehHH
Confidence 99999999977666 678999999999999887 78999864
No 43
>COG0181 HemC Porphobilinogen deaminase [Coenzyme metabolism]
Probab=61.08 E-value=6.4 Score=33.62 Aligned_cols=113 Identities=20% Similarity=0.263 Sum_probs=60.0
Q ss_pred EEEecCCHHHHHHHHhCCCCeEEe--cCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh----cccC---CCCCceE
Q psy14704 14 IVLASSSPRRSQILKSIGLKFEVI--PSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQH----LKED---NVEPDLI 84 (162)
Q Consensus 14 iILAS~SprR~~lL~~~g~~f~v~--~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~----~~~~---~~~~~~v 84 (162)
-+.+++|.||+..|+....++++. --++| -++.+-.- ..-..+++.-|-.|=..+... +..+ ..++.=.
T Consensus 121 a~VGTSSlRR~aql~~~rPdl~i~~lRGNVd-TRL~KL~~-g~yDAIILA~AGL~RLgl~~~~~~~l~p~~~~PA~gQGa 198 (307)
T COG0181 121 AVVGTSSLRRQAQLKALRPDLKIEPLRGNVD-TRLRKLDE-GEYDAIILAAAGLKRLGLENRITEILDPEEFLPAPGQGA 198 (307)
T ss_pred CccccchHHHHHHHHHhCCCCeEEeccCcHH-HHHHHhhc-CCccHHHHHHHHHHhcCCcccceeecChhhcCCCCCCce
Confidence 588999999999999887765554 46677 65433110 022345555454443322211 1100 1122223
Q ss_pred EEeceEEee--CCEEe--cCCCCHHHH-------HHHHHHcCCCeEEEEEEEEEEECC
Q psy14704 85 IGADTVVSI--NDMML--GKPEDEEEA-------KEFLSKLSGNTHSVFTGVAILTKD 131 (162)
Q Consensus 85 I~aDTvV~~--~g~Il--gKP~~~~eA-------~~~L~~lsG~~h~V~Tgv~l~~~~ 131 (162)
|| |..- |.+++ =|+.+.++. +.||+.|.|.-|.=+-+.+.+..+
T Consensus 199 l~---ie~R~~d~~~~~ll~~i~~~~t~~~v~aERa~l~~L~ggC~~PIg~~a~~~~~ 253 (307)
T COG0181 199 LA---IECRAGDEKVLELLAELNDEDTRICVTAERAFLRELEGGCQVPIGAYAELTGG 253 (307)
T ss_pred EE---EEEecCcHHHHHHHHhccCchHHHHHHHHHHHHHhhCCCCCCceEEEEEEcCC
Confidence 33 2221 22221 233333322 349999999988777777777554
No 44
>PF01379 Porphobil_deam: Porphobilinogen deaminase, dipyromethane cofactor binding domain; InterPro: IPR022417 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. Porphobilinogen deaminase (also known as hydroxymethylbilane synthase, 2.5.1.61 from EC) functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses the polymerisation of four PBG molecules into the tetrapyrrole structure, preuroporphyrinogen, with the concomitant release of four molecules of ammonia. This enzyme uses a unique dipyrro-methane cofactor made from two molecules of PBG, which is covalently attached to a cysteine side chain. The tetrapyrrole product is synthesized in an ordered, sequential fashion, by initial attachment of the first pyrrole unit (ring A) to the cofactor, followed by subsequent additions of the remaining pyrrole units (rings B, C, D) to the growing pyrrole chain []. The link between the pyrrole ring and the cofactor is broken once all the pyrroles have been added. This enzyme is folded into three distinct domains that enclose a single, large active site that makes use of an aspartic acid as its one essential catalytic residue, acting as a general acid/base during catalysis [, ]. A deficiency of hydroxymethylbilane synthase is implicated in the neuropathic disease, Acute Intermittent Porphyria (AIP) []. This entry represents the N-terminal domains 1 and 2 of porphobilinogen deaminase, an enzyme involved in tetrapyrrole biosynthesis. The structure of this domain consists of a duplication of two similar intertwined domains with three layers of (a/b/a) each. Porphobilinogen deaminase has a three-domain structure. Domains 1 (N-terminal) and 2 are duplications with the same structure, resembling the transferrins and periplasmic binding proteins. The dipyrromethane cofactor is covalently linked to domain 3 (C-terminal), but is bound by extensive salt-bridges and hydrogen-bonds within the cleft between domains 1 and 2, at a position corresponding to the binding sites for small-molecule ligands in the analogous proteins []. The enzyme has a single catalytic site, and the flexibility between domains is thought to aid elongation of the polypyrrole product in the active-site cleft of the enzyme.; GO: 0033014 tetrapyrrole biosynthetic process; PDB: 1GTK_A 1AH5_A 2YPN_A 1PDA_A 1YPN_A 3EQ1_B 3ECR_A.
Probab=58.78 E-value=8.6 Score=31.19 Aligned_cols=26 Identities=35% Similarity=0.473 Sum_probs=16.5
Q ss_pred cEEEecCCHHHHHHHHhCCCCeEEec
Q psy14704 13 KIVLASSSPRRSQILKSIGLKFEVIP 38 (162)
Q Consensus 13 ~iILAS~SprR~~lL~~~g~~f~v~~ 38 (162)
.-+.|++|+||+..|+.+..++++++
T Consensus 120 ga~IGTsS~RR~aql~~~~pdl~~~~ 145 (215)
T PF01379_consen 120 GARIGTSSLRRRAQLKRLRPDLEVVP 145 (215)
T ss_dssp T-EEE---HHHHHHHHHH-TTSEEE-
T ss_pred ccccCCCCHHHHHHHHHhccCCeEEE
Confidence 47899999999999998877666553
No 45
>COG0041 PurE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]
Probab=58.76 E-value=13 Score=28.83 Aligned_cols=27 Identities=30% Similarity=0.518 Sum_probs=22.4
Q ss_pred CcEEEecCCHHH-----HHHHHhCCCCeEEec
Q psy14704 12 LKIVLASSSPRR-----SQILKSIGLKFEVIP 38 (162)
Q Consensus 12 ~~iILAS~SprR-----~~lL~~~g~~f~v~~ 38 (162)
.-||.+|.|-+. .++|+.+|++|++..
T Consensus 5 V~IIMGS~SD~~~mk~Aa~~L~~fgi~ye~~V 36 (162)
T COG0041 5 VGIIMGSKSDWDTMKKAAEILEEFGVPYEVRV 36 (162)
T ss_pred EEEEecCcchHHHHHHHHHHHHHcCCCeEEEE
Confidence 358999999887 479999999997553
No 46
>cd00494 HMBS Hydroxymethylbilane synthase (HMBS), also known as porphobilinogen deaminase (PBGD), is an intermediate enzyme in the biosynthetic pathway of tetrapyrrolic ring systems, such as heme, chlorophylls, and vitamin B12. HMBS catalyzes the conversion of porphobilinogen (PBG) into hydroxymethylbilane (HMB). HMBS consists of three domains, and is believed to bind substrate through a hinge-bending motion of domains I and II. HMBS is found in all organisms except viruses.
Probab=56.48 E-value=11 Score=31.88 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=24.9
Q ss_pred EEEecCCHHHHHHHHhCCCCeEEe--cCCCCCCCCC
Q psy14704 14 IVLASSSPRRSQILKSIGLKFEVI--PSNFDESSIP 47 (162)
Q Consensus 14 iILAS~SprR~~lL~~~g~~f~v~--~~~~deE~~~ 47 (162)
-+.|++|+||+..|+.+-.+++++ --++| .++.
T Consensus 118 a~IGTsS~RR~aql~~~rpdl~~~~iRGNV~-TRL~ 152 (292)
T cd00494 118 SVVGTSSLRRQAQLKRKRPDLKFEPLRGNVD-TRLR 152 (292)
T ss_pred CEEecCCHHHHHHHHHHCCCCEEEEcCCCHH-HHHH
Confidence 488999999999999887766555 45666 5543
No 47
>PRK00072 hemC porphobilinogen deaminase; Reviewed
Probab=54.08 E-value=13 Score=31.51 Aligned_cols=33 Identities=30% Similarity=0.460 Sum_probs=26.7
Q ss_pred EEEecCCHHHHHHHHhCCCCeEEec--CCCCCCCCC
Q psy14704 14 IVLASSSPRRSQILKSIGLKFEVIP--SNFDESSIP 47 (162)
Q Consensus 14 iILAS~SprR~~lL~~~g~~f~v~~--~~~deE~~~ 47 (162)
-+.|++|+||+..|+.+..++++++ -++| .++.
T Consensus 122 a~IGTsS~RR~aql~~~~Pdl~~~~iRGNV~-TRL~ 156 (295)
T PRK00072 122 AVVGTSSLRRQAQLLALRPDLEIKPLRGNVD-TRLR 156 (295)
T ss_pred CEEecCcHHHHHHHHHHCcCCEEEECccCHH-HHHH
Confidence 5889999999999999888877776 5666 5543
No 48
>COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain [General function prediction only]
Probab=52.77 E-value=53 Score=29.49 Aligned_cols=57 Identities=23% Similarity=0.117 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEEeeCCEEecCCCCHHHHHHHHHHcCC
Q psy14704 54 NYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVVSINDMMLGKPEDEEEAKEFLSKLSG 116 (162)
Q Consensus 54 ~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV~~~g~IlgKP~~~~eA~~~L~~lsG 116 (162)
.|++.+...|.+.++.+.... .+..++.-|+ .+.+=++.+|+.+.+++.++|...-|
T Consensus 288 ~~e~~AKAvalAl~~~alaen-----R~~~~~lF~s-~~~~~el~~k~~~~~e~i~fL~~~f~ 344 (437)
T COG2425 288 FKEQWAKAVALALMRIALAEN-----RDCYVILFDS-EVIEYELYEKKIDIEELIEFLSYVFG 344 (437)
T ss_pred cHHHHHHHHHHHHHHHHHHhc-----cceEEEEecc-cceeeeecCCccCHHHHHHHHhhhcC
Confidence 688888888888887665543 2567788888 77788999999999999999887643
No 49
>cd04911 ACT_AKiii-YclM-BS_1 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. Bacillus subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from Bacillus subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=51.38 E-value=14 Score=25.03 Aligned_cols=18 Identities=39% Similarity=0.772 Sum_probs=17.1
Q ss_pred HHHHhCCCCeEEecCCCC
Q psy14704 25 QILKSIGLKFEVIPSNFD 42 (162)
Q Consensus 25 ~lL~~~g~~f~v~~~~~d 42 (162)
++|+..|+.|+-+|+.+|
T Consensus 23 ~I~E~~~is~Eh~PSGID 40 (76)
T cd04911 23 SILEDNGISYEHMPSGID 40 (76)
T ss_pred HHHHHcCCCEeeecCCCc
Confidence 689999999999999999
No 50
>PRK13843 conjugal transfer protein TraH; Provisional
Probab=49.86 E-value=24 Score=28.43 Aligned_cols=26 Identities=19% Similarity=0.409 Sum_probs=22.3
Q ss_pred eCCE--EecCCCCHHHHHHHHHHcCCCe
Q psy14704 93 INDM--MLGKPEDEEEAKEFLSKLSGNT 118 (162)
Q Consensus 93 ~~g~--IlgKP~~~~eA~~~L~~lsG~~ 118 (162)
.+|+ +..||++.+||....+.|-|+-
T Consensus 39 ~ggr~~L~~~P~s~~EA~~~vr~l~~~g 66 (207)
T PRK13843 39 SGGRLVLVPKPKTPDEAMALIRQYVGQA 66 (207)
T ss_pred eCCeeeecCCCCCHHHHHHHHHHHHhcC
Confidence 3565 4699999999999999999885
No 51
>TIGR00212 hemC porphobilinogen deaminase. Biosynthesis of cofactors, prosthetic groups, and carriers: Heme and porphyrin
Probab=48.02 E-value=18 Score=30.65 Aligned_cols=32 Identities=31% Similarity=0.475 Sum_probs=24.7
Q ss_pred EEEecCCHHHHHHHHhCCCCeEEec--CCCCCCCC
Q psy14704 14 IVLASSSPRRSQILKSIGLKFEVIP--SNFDESSI 46 (162)
Q Consensus 14 iILAS~SprR~~lL~~~g~~f~v~~--~~~deE~~ 46 (162)
-+.|++|+||+..|..+-.+.++++ -++| .++
T Consensus 118 a~VGTsS~RR~aql~~~rPdl~i~~iRGNV~-TRL 151 (292)
T TIGR00212 118 AKVGTSSLRRKAQLKAIRPDLKIEPLRGNID-TRL 151 (292)
T ss_pred CEeccCCHHHHHHHHHHCCCCEEEECcCCHH-HHH
Confidence 5889999999999998877766654 4566 443
No 52
>PRK01066 porphobilinogen deaminase; Provisional
Probab=46.92 E-value=19 Score=29.58 Aligned_cols=33 Identities=21% Similarity=0.254 Sum_probs=24.7
Q ss_pred cEEEecCCHHHHHHHHhCCCCeEEec--CCCCCCCC
Q psy14704 13 KIVLASSSPRRSQILKSIGLKFEVIP--SNFDESSI 46 (162)
Q Consensus 13 ~iILAS~SprR~~lL~~~g~~f~v~~--~~~deE~~ 46 (162)
.-+.|++|+||+..|..+-.++++++ -++| .++
T Consensus 132 ga~IGTSS~RR~aql~~~rPdl~v~~iRGNV~-TRL 166 (231)
T PRK01066 132 RPRIGSSSLRREELLKLLFPSGIILDIRGTIE-ERL 166 (231)
T ss_pred CCEEeCChHHHHHHHHHHCCCCEEEeCcCCHH-HHH
Confidence 35889999999999998877666554 4566 544
No 53
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=46.90 E-value=26 Score=24.51 Aligned_cols=24 Identities=17% Similarity=0.367 Sum_probs=20.8
Q ss_pred CCcEEEecCCHHHHHHHHhCCCCe
Q psy14704 11 NLKIVLASSSPRRSQILKSIGLKF 34 (162)
Q Consensus 11 ~~~iILAS~SprR~~lL~~~g~~f 34 (162)
..++|....|+.|+++++++|...
T Consensus 14 G~~vi~~~~~~~k~~~~~~~Ga~~ 37 (130)
T PF00107_consen 14 GAKVIATDRSEEKLELAKELGADH 37 (130)
T ss_dssp TSEEEEEESSHHHHHHHHHTTESE
T ss_pred CCEEEEEECCHHHHHHHHhhcccc
Confidence 378999999999999999999443
No 54
>PRK07143 hypothetical protein; Provisional
Probab=46.51 E-value=50 Score=27.68 Aligned_cols=94 Identities=16% Similarity=0.327 Sum_probs=55.5
Q ss_pred HHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEEeeCCEEecC
Q psy14704 21 PRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVVSINDMMLGK 100 (162)
Q Consensus 21 prR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV~~~g~IlgK 100 (162)
..|.++|+++|+++.++- +|+ +.+ ... +|++++..+- + +. ...+|+|.|= -|||
T Consensus 68 ~er~~~l~~~Gvd~~~~~-~F~-~~~-a~l---s~e~Fi~~ll--~-------l~----~~~iVvG~Df-------~FG~ 121 (279)
T PRK07143 68 NSRLQTLANLGFKNIILL-DFN-EEL-QNL---SGNDFIEKLT--K-------NQ----VSFFVVGKDF-------RFGK 121 (279)
T ss_pred HHHHHHHHHCCCCEEEEe-CCC-HHH-hCC---CHHHHHHHHH--h-------cC----CCEEEECCCc-------ccCC
Confidence 478999999999875553 476 553 334 7999988641 1 21 3456666664 3554
Q ss_pred CCCHHHHHHHHHHcCCCeEEEEEEEEEEECCcceEEEEEEEEEE--cCCCHHHHHHHHHcCC
Q psy14704 101 PEDEEEAKEFLSKLSGNTHSVFTGVAILTKDKDSRFYNQTQVTF--ANLTPAVISAYVKTRE 160 (162)
Q Consensus 101 P~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~t~V~F--~~l~~~~I~~Yv~tge 160 (162)
= ++--...|+.+.+ .|.++.. +.+ ..+|...|..+|+.|+
T Consensus 122 ~--r~G~~~~L~~~~~-------~v~~v~~-----------~~~~g~~ISST~IR~~l~~G~ 163 (279)
T PRK07143 122 N--ASWNADDLKEYFP-------NVHIVEI-----------LKINQQKISTSLLKEFIEFGD 163 (279)
T ss_pred C--CCCCHHHHHHhCC-------cEEEeCC-----------EEcCCcEEcHHHHHHHHHcCC
Confidence 2 2223567777754 1211111 111 2457888888888875
No 55
>PLN02691 porphobilinogen deaminase
Probab=44.41 E-value=22 Score=30.94 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=25.4
Q ss_pred cEEEecCCHHHHHHHHhCCCCeEEec--CCCCCCCCC
Q psy14704 13 KIVLASSSPRRSQILKSIGLKFEVIP--SNFDESSIP 47 (162)
Q Consensus 13 ~iILAS~SprR~~lL~~~g~~f~v~~--~~~deE~~~ 47 (162)
--+.|++|+||+..|+.+-.+.++++ -++| .++.
T Consensus 164 ga~IGTSS~RR~aql~~~rPdl~v~~iRGNVd-TRL~ 199 (351)
T PLN02691 164 GSVVGTASLRRQSQILHKYPHLKVVNFRGNVQ-TRLR 199 (351)
T ss_pred CCEeccCcHHHHHHHHHHCCCCEEEeccCCHH-HHHH
Confidence 36899999999999998876666554 5566 5543
No 56
>PF07131 DUF1382: Protein of unknown function (DUF1382); InterPro: IPR009814 This entry is represented by Bacteriophage lambda, Xis. This entry overlaps with IPR009750, both representing lambda Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Escherichia coli and Bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown.
Probab=38.65 E-value=18 Score=23.54 Aligned_cols=20 Identities=35% Similarity=0.559 Sum_probs=17.1
Q ss_pred HHHHhCCCCeEEecCCCCCCC
Q psy14704 25 QILKSIGLKFEVIPSNFDESS 45 (162)
Q Consensus 25 ~lL~~~g~~f~v~~~~~deE~ 45 (162)
..|.+.|+.|..+|...| |.
T Consensus 17 ~~La~~GIRFVpiPv~~d-ee 36 (61)
T PF07131_consen 17 HSLAHIGIRFVPIPVVTD-EE 36 (61)
T ss_pred HHHHHcCceeeccccccH-HH
Confidence 468899999999999888 54
No 57
>PF08373 RAP: RAP domain; InterPro: IPR013584 The ~60-residue RAP (an acronym for RNA-binding domain abundant in Apicomplexans) domain is found in various proteins in eukaryotes. It is particularly abundant in apicomplexans and might mediate a range of cellular functions through its potential interactions with RNA []. The RAP domain consists of multiple blocks of charged and aromatics residues and is predicted to be composed of alpha helical and beta strand structures. Two predicted loop regions that are dominated by glycine and tryptophan residues are found before and after the central beta sheet []. Some proteins known to contain a RAP domain are listed below: Human hypothetical protein MGC5297, Mammalian FAST kinase domain-containing proteins (FASTKDs), Chlamydomonas reinhardtii chloroplastic trans-splicing factor Raa3.
Probab=38.37 E-value=24 Score=21.68 Aligned_cols=21 Identities=33% Similarity=0.509 Sum_probs=16.0
Q ss_pred cCCHHHHHHHHhCCCCeEEec
Q psy14704 18 SSSPRRSQILKSIGLKFEVIP 38 (162)
Q Consensus 18 S~SprR~~lL~~~g~~f~v~~ 38 (162)
.++--|..+|+.+|+++..+|
T Consensus 18 g~t~lk~r~L~~~G~~Vi~Ip 38 (58)
T PF08373_consen 18 GSTKLKHRHLKALGYKVISIP 38 (58)
T ss_pred hHHHHHHHHHHHCCCEEEEec
Confidence 566778899999997665554
No 58
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=37.98 E-value=2.3e+02 Score=23.44 Aligned_cols=93 Identities=16% Similarity=0.044 Sum_probs=55.0
Q ss_pred cCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------HHHHhcccCCCCCceEEEeceE
Q psy14704 18 SSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKAL-------EVSQHLKEDNVEPDLIIGADTV 90 (162)
Q Consensus 18 S~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~-------~v~~~~~~~~~~~~~vI~aDTv 90 (162)
|+|--=+++|...+-.|.++.. |+.+..+ -...+..|+...-. ++...++ .-+.+++|||+|
T Consensus 94 s~S~~v~~~l~~~~~~~~V~v~----ESrP~~e----G~~~a~~L~~~GI~vtli~Dsa~~~~m~---~vd~VlvGAd~V 162 (253)
T PRK06372 94 SSSQVLKAFISSSEKIKSVYIL----ESRPMLE----GIDMAKLLVKSGIDVVLLTDASMCEAVL---NVDAVIVGSDSV 162 (253)
T ss_pred CCcHHHHHHHHhcCCCCEEEEe----cCCCchH----HHHHHHHHHHCCCCEEEEehhHHHHHHH---hCCEEEECccEE
Confidence 3455556667666654776633 4433322 24566666654310 1111111 136899999996
Q ss_pred EeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEE
Q psy14704 91 VSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTG 124 (162)
Q Consensus 91 V~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tg 124 (162)
..||-++.|-.+..-| ++-...|....|.++
T Consensus 163 -~~nG~v~nkvGT~~~A--l~A~~~~vPv~V~~~ 193 (253)
T PRK06372 163 -LYDGGLIHKNGTFPLA--LCARYLKKPFYSLTI 193 (253)
T ss_pred -ecCCCEeehhhHHHHH--HHHHHcCCCEEEEee
Confidence 4688899999887544 466667777777544
No 59
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=37.58 E-value=1.4e+02 Score=25.22 Aligned_cols=80 Identities=18% Similarity=0.163 Sum_probs=49.9
Q ss_pred hCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHH----------HHHHHHhcccCCCCCceEEEeceEEeeCCEEe
Q psy14704 29 SIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKK----------ALEVSQHLKEDNVEPDLIIGADTVVSINDMML 98 (162)
Q Consensus 29 ~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~K----------a~~v~~~~~~~~~~~~~vI~aDTvV~~~g~Il 98 (162)
+-|-+|.|+ +. |+.+..+ -...+..|++.. +-.+..+ -+.+++|||.|. .||-++
T Consensus 137 ~~~~~f~V~---v~-EsrP~~~----G~~~a~~L~~~gI~vtlI~Dsa~~~~m~~------vd~VivGad~v~-~nG~v~ 201 (301)
T TIGR00511 137 EQGKDIEVI---AT-ETRPRKQ----GHITAKELRDYGIPVTLIVDSAVRYFMKE------VDHVVVGADAIT-ANGALI 201 (301)
T ss_pred HcCCcEEEE---Ee-cCCCcch----HHHHHHHHHHCCCCEEEEehhHHHHHHHh------CCEEEECccEEe-cCCCEE
Confidence 468889988 44 5544333 245666666543 2222233 368999999965 677788
Q ss_pred cCCCCHHHHHHHHHHcCCCeEEEEEEE
Q psy14704 99 GKPEDEEEAKEFLSKLSGNTHSVFTGV 125 (162)
Q Consensus 99 gKP~~~~eA~~~L~~lsG~~h~V~Tgv 125 (162)
.|-.+..=| ++-+..|....|.+..
T Consensus 202 nkiGT~~lA--~~Ak~~~vPv~V~a~~ 226 (301)
T TIGR00511 202 NKIGTSQLA--LAAREARVPFMVAAET 226 (301)
T ss_pred EHHhHHHHH--HHHHHhCCCEEEEccc
Confidence 998887644 4555667666665543
No 60
>PF06690 DUF1188: Protein of unknown function (DUF1188); InterPro: IPR009573 This family consists of several hypothetical archaeal proteins of around 260 residues in length, which seem to be specific to Methanobacterium, Methanococcus and Methanopyrus species. The function of this family is unknown.
Probab=37.10 E-value=62 Score=26.91 Aligned_cols=34 Identities=29% Similarity=0.391 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEe
Q psy14704 54 NYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGA 87 (162)
Q Consensus 54 ~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~a 87 (162)
.+.+++..++..||.++..-+........+|+||
T Consensus 17 ~~~DIi~~I~ekKa~ai~~~le~~~~k~~lI~G~ 50 (252)
T PF06690_consen 17 KVIDIIKEIAEKKANAIKYWLEGEEFKQALIFGA 50 (252)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccccceEEEEEE
Confidence 6889999999999999988665333346778875
No 61
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=37.03 E-value=1.3e+02 Score=25.36 Aligned_cols=79 Identities=18% Similarity=0.182 Sum_probs=50.1
Q ss_pred CCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHH----------HHHHHHhcccCCCCCceEEEeceEEeeCCEEec
Q psy14704 30 IGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKK----------ALEVSQHLKEDNVEPDLIIGADTVVSINDMMLG 99 (162)
Q Consensus 30 ~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~K----------a~~v~~~~~~~~~~~~~vI~aDTvV~~~g~Ilg 99 (162)
.|-+|.|+ +. |+.+..+ . ...+..|++.. +-.+..+ -+.+++|||.| ..||-+++
T Consensus 143 ~~k~~~V~---v~-EsrP~~~---G-~~~a~~L~~~GI~vtlI~Dsav~~~m~~------vd~VivGAd~v-~~nG~v~n 207 (310)
T PRK08535 143 QGKDIEVI---AT-ETRPRNQ---G-HITAKELAEYGIPVTLIVDSAVRYFMKD------VDKVVVGADAI-TANGAVIN 207 (310)
T ss_pred CCCeEEEE---Ee-cCCchhh---H-HHHHHHHHHCCCCEEEEehhHHHHHHHh------CCEEEECccEE-ecCCCEEe
Confidence 57889988 44 5544333 2 45666666543 2222333 36899999997 56888889
Q ss_pred CCCCHHHHHHHHHHcCCCeEEEEEEE
Q psy14704 100 KPEDEEEAKEFLSKLSGNTHSVFTGV 125 (162)
Q Consensus 100 KP~~~~eA~~~L~~lsG~~h~V~Tgv 125 (162)
|-.+..= .++-+..|....|.+..
T Consensus 208 kiGT~~~--A~~Ak~~~vPv~V~a~~ 231 (310)
T PRK08535 208 KIGTSQI--ALAAHEARVPFMVAAET 231 (310)
T ss_pred HHhHHHH--HHHHHHhCCCEEEeccc
Confidence 9888754 44666667776666543
No 62
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=36.76 E-value=26 Score=24.00 Aligned_cols=17 Identities=47% Similarity=0.767 Sum_probs=14.2
Q ss_pred HHHHHHHHHHcCCCeEE
Q psy14704 104 EEEAKEFLSKLSGNTHS 120 (162)
Q Consensus 104 ~~eA~~~L~~lsG~~h~ 120 (162)
++-|.++.+++||.+|.
T Consensus 21 rdAAlQfVRKlSGtT~P 37 (88)
T COG5552 21 RDAALQFVRKLSGTTHP 37 (88)
T ss_pred HHHHHHHHHHhcCCCCc
Confidence 45688999999999885
No 63
>TIGR00315 cdhB CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit. Nomenclature follows the description for Methanosarcina thermophila. The complex is also found in Archaeoglobus fulgidus, not considered a methanogen, but is otherwise generally associated with methanogenesis.
Probab=36.29 E-value=60 Score=25.09 Aligned_cols=59 Identities=19% Similarity=0.253 Sum_probs=37.5
Q ss_pred EeceEEeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEEECCcceEEEEEEEEEEcCCCHHHHHHHHHc
Q psy14704 86 GADTVVSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAILTKDKDSRFYNQTQVTFANLTPAVISAYVKT 158 (162)
Q Consensus 86 ~aDTvV~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~t~V~F~~l~~~~I~~Yv~t 158 (162)
-+|+|+..+-.. --+-+||+.|.--.|...-++| ...+..++..|-++++++-..|++.
T Consensus 100 ~~DlvlfvG~~~-------y~~~~~ls~lk~f~~~~~i~l~-------~~y~pnA~~Sf~n~~~~~~~~~l~~ 158 (162)
T TIGR00315 100 NYDLVLFLGIIY-------YYLSQMLSSLKHFSHIVTIAID-------KYYQPNADYSFPNLSKDEYLDYLRK 158 (162)
T ss_pred CcCEEEEeCCcc-------hHHHHHHHHHHhhcCcEEEEec-------CCCCCCCceeccccCHHHHHHHHHH
Confidence 467777666543 3355566666533353333333 2236788999999999998888874
No 64
>PRK08238 hypothetical protein; Validated
Probab=35.85 E-value=1.4e+02 Score=26.91 Aligned_cols=30 Identities=37% Similarity=0.627 Sum_probs=22.8
Q ss_pred CCCcEEEecCCHHH--HHHHHhCCCCeE-EecCC
Q psy14704 10 NNLKIVLASSSPRR--SQILKSIGLKFE-VIPSN 40 (162)
Q Consensus 10 ~~~~iILAS~SprR--~~lL~~~g~~f~-v~~~~ 40 (162)
+..+++++|+|+++ +.+++.+|+ |+ ++.++
T Consensus 87 ~G~~v~LaTas~~~~a~~i~~~lGl-Fd~Vigsd 119 (479)
T PRK08238 87 AGRKLVLATASDERLAQAVAAHLGL-FDGVFASD 119 (479)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHcCC-CCEEEeCC
Confidence 35689999999998 667889998 53 44444
No 65
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=33.50 E-value=59 Score=25.59 Aligned_cols=38 Identities=32% Similarity=0.475 Sum_probs=26.2
Q ss_pred EEEeceEEe-eCCEEecCCCCHHHHHHHHHHcCCCeEEEE
Q psy14704 84 IIGADTVVS-INDMMLGKPEDEEEAKEFLSKLSGNTHSVF 122 (162)
Q Consensus 84 vI~aDTvV~-~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~ 122 (162)
+++-|-+|+ +++-+.++- ++.+|...|++|.|+.|-|.
T Consensus 42 tv~p~D~lwhLGDl~~~~n-~~~~a~~IlerLnGrkhlv~ 80 (186)
T COG4186 42 TVGPDDVLWHLGDLSSGAN-RERAAGLILERLNGRKHLVP 80 (186)
T ss_pred cCCccceEEEecccccccc-hhhHHHHHHHHcCCcEEEee
Confidence 445444454 455555554 48889999999999997664
No 66
>PRK12677 xylose isomerase; Provisional
Probab=33.39 E-value=1.8e+02 Score=25.36 Aligned_cols=77 Identities=21% Similarity=0.246 Sum_probs=41.2
Q ss_pred HHHHHhCCCCeEEecCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEEeeCCEE---ec
Q psy14704 24 SQILKSIGLKFEVIPSN-FDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVVSINDMM---LG 99 (162)
Q Consensus 24 ~~lL~~~g~~f~v~~~~-~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV~~~g~I---lg 99 (162)
+++|+..|+.+..+.++ +.......+.+. +|..-+.+.|..+.+...+.- --+||++||+..|.. +.
T Consensus 73 k~~l~~~GL~v~~v~~n~f~~p~~~~g~lt-s~d~~~R~~Ai~~~~r~IdlA--------~eLGa~~Vvv~~G~~g~~~~ 143 (384)
T PRK12677 73 KKALDETGLVVPMVTTNLFTHPVFKDGAFT-SNDRDVRRYALRKVLRNIDLA--------AELGAKTYVMWGGREGAEYD 143 (384)
T ss_pred HHHHHHcCCeeEEEecCCCCCccccCCcCC-CCCHHHHHHHHHHHHHHHHHH--------HHhCCCEEEEeeCCCCccCc
Confidence 45677899998866554 220111112222 444445666665555554432 137888888876643 22
Q ss_pred CCCCHHHHHH
Q psy14704 100 KPEDEEEAKE 109 (162)
Q Consensus 100 KP~~~~eA~~ 109 (162)
-..|.+++++
T Consensus 144 ~~~d~~~a~~ 153 (384)
T PRK12677 144 AAKDVRAALD 153 (384)
T ss_pred ccCCHHHHHH
Confidence 3345565554
No 67
>TIGR00083 ribF riboflavin kinase/FMN adenylyltransferase. multifunctional enzyme: riboflavin kinase (EC 2.7.1.26) (flavokinase) / FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthetase).
Probab=33.13 E-value=67 Score=27.02 Aligned_cols=39 Identities=13% Similarity=0.263 Sum_probs=28.5
Q ss_pred CCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHH
Q psy14704 19 SSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELA 63 (162)
Q Consensus 19 ~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA 63 (162)
+-..|.++|+++|++..++-+ |+ +.+. .. +|++++..+-
T Consensus 55 ~~~~k~~~l~~~Gvd~~~~~~-F~-~~~a-~l---s~e~Fi~~~l 93 (288)
T TIGR00083 55 PLEDKARQLQIKGVEQLLVVV-FD-EEFA-NL---SALQFIDQLI 93 (288)
T ss_pred CHHHHHHHHHHcCCCEEEEeC-CC-HHHH-cC---CHHHHHHHHH
Confidence 347899999999998765544 77 5543 34 7999998654
No 68
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=32.92 E-value=2.3e+02 Score=23.72 Aligned_cols=79 Identities=20% Similarity=0.200 Sum_probs=50.7
Q ss_pred hCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHH----------HHHHHHhcccCCCCCceEEEeceEEeeCCEEe
Q psy14704 29 SIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKK----------ALEVSQHLKEDNVEPDLIIGADTVVSINDMML 98 (162)
Q Consensus 29 ~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~K----------a~~v~~~~~~~~~~~~~vI~aDTvV~~~g~Il 98 (162)
.-|-+|.|+ ++ |+.+..+ -..++..|++.. +-.+..+ -+.+|+|||.| .-||-++
T Consensus 131 ~~gk~~~V~---v~-EsrP~~q----G~~la~eL~~~GI~vtlI~Dsa~~~~m~~------vd~VivGAD~I-~~nG~v~ 195 (275)
T PRK08335 131 RKGKRFKVI---LT-ESAPDYE----GLALANELEFLGIEFEVITDAQLGLFAKE------ATLALVGADNV-TRDGYVV 195 (275)
T ss_pred HcCCceEEE---Ee-cCCCchh----HHHHHHHHHHCCCCEEEEeccHHHHHHHh------CCEEEECccEE-ecCCCEe
Confidence 468889988 55 6544322 234555555543 1111122 36899999996 5788899
Q ss_pred cCCCCHHHHHHHHHHcCCCeEEEEEE
Q psy14704 99 GKPEDEEEAKEFLSKLSGNTHSVFTG 124 (162)
Q Consensus 99 gKP~~~~eA~~~L~~lsG~~h~V~Tg 124 (162)
.|-.+..=| ++-+..|....|...
T Consensus 196 NKiGT~~lA--~~Ak~~~vPfyV~a~ 219 (275)
T PRK08335 196 NKAGTYLLA--LACHDNGVPFYVAAE 219 (275)
T ss_pred ehhhHHHHH--HHHHHcCCCEEEECc
Confidence 999988755 566777877777544
No 69
>COG1094 Predicted RNA-binding protein (contains KH domains) [General function prediction only]
Probab=32.85 E-value=87 Score=25.07 Aligned_cols=34 Identities=29% Similarity=0.359 Sum_probs=25.2
Q ss_pred CceEEEeceEEeeCCEEecCCCCHHHHHHHHHHc-CCCeE
Q psy14704 81 PDLIIGADTVVSINDMMLGKPEDEEEAKEFLSKL-SGNTH 119 (162)
Q Consensus 81 ~~~vI~aDTvV~~~g~IlgKP~~~~eA~~~L~~l-sG~~h 119 (162)
-.+++..+|| -|+|.|.+.+.|++-...| .|..|
T Consensus 133 ~~I~V~g~tV-----aiiG~~~~v~iAr~AVemli~G~~h 167 (194)
T COG1094 133 VYISVYGKTV-----AIIGGFEQVEIAREAVEMLINGAPH 167 (194)
T ss_pred CeEEEeCcEE-----EEecChhhhHHHHHHHHHHHcCCCc
Confidence 3566777776 4889999999998877766 46555
No 70
>cd06532 Glyco_transf_25 Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.
Probab=32.45 E-value=1.9e+02 Score=20.68 Aligned_cols=98 Identities=24% Similarity=0.248 Sum_probs=49.1
Q ss_pred EEEecCCHHHHHHH---HhCCCCeEEecCCCCCCCCCCC--------------CCCCCHHHHHHHHHHHHHHHHHHhccc
Q psy14704 14 IVLASSSPRRSQIL---KSIGLKFEVIPSNFDESSIPVS--------------KFKSNYGEYVSELAYKKALEVSQHLKE 76 (162)
Q Consensus 14 iILAS~SprR~~lL---~~~g~~f~v~~~~~deE~~~~~--------------~~~~~p~~~v~~lA~~Ka~~v~~~~~~ 76 (162)
|=|.++.-||..+. ..+|++|+.++. +|-.++... ....+|.++...++..++-.-.-.-+
T Consensus 5 InL~~~~~Rr~~~~~~~~~~~~~~~~~~A-vd~~~~~~~~~~~~~~~~~~~~~~~~l~~gEiGC~lSH~~~w~~~~~~~- 82 (128)
T cd06532 5 INLDRSTDRRERMEAQLAALGLDFEFFDA-VDGKDLSEEELAALYDALFLPRYGRPLTPGEIGCFLSHYKLWQKIVESN- 82 (128)
T ss_pred EECCCCHHHHHHHHHHHHHcCCCeEEEec-cccccCCHHHHHHHhHHHhhhhcCCCCChhhHHHHHHHHHHHHHHHHcC-
Confidence 45677777777774 468999987754 331221110 00015778888888877742222111
Q ss_pred CCCCCceEEEeceEEeeCCEEecCCCCHHHHHHHHHHcCC
Q psy14704 77 DNVEPDLIIGADTVVSINDMMLGKPEDEEEAKEFLSKLSG 116 (162)
Q Consensus 77 ~~~~~~~vI~aDTvV~~~g~IlgKP~~~~eA~~~L~~lsG 116 (162)
.+..+|+=-| +....+.-.|==.+++-|+++|.....
T Consensus 83 --~~~alIlEDD-v~~~~~~~~~Y~vs~~~A~~ll~~~~~ 119 (128)
T cd06532 83 --LEYALILEDD-AILDPDGTAGYLVSRKGAKKLLAALEP 119 (128)
T ss_pred --CCeEEEEccC-cEECCCCceEEEeCHHHHHHHHHhCCC
Confidence 1233444333 333332222222345556666665543
No 71
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=32.09 E-value=72 Score=22.71 Aligned_cols=29 Identities=24% Similarity=0.602 Sum_probs=21.2
Q ss_pred hhhhcC--CCcEEEecCCHHHH--HHHHhCCCC
Q psy14704 5 YMGQLN--NLKIVLASSSPRRS--QILKSIGLK 33 (162)
Q Consensus 5 ~~~~l~--~~~iILAS~SprR~--~lL~~~g~~ 33 (162)
++..++ ..++++.|+++++. .+|+++|+.
T Consensus 85 ~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 85 LLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp HHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred hhhhcccccceeEEeecCCcccccccccccccc
Confidence 344443 57888888887775 688999987
No 72
>cd02064 FAD_synthetase_N FAD synthetase, N-terminal domain of the bifunctional enzyme. FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation.
Probab=32.01 E-value=84 Score=24.08 Aligned_cols=38 Identities=24% Similarity=0.506 Sum_probs=25.5
Q ss_pred CCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHH
Q psy14704 19 SSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSEL 62 (162)
Q Consensus 19 ~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~l 62 (162)
+-..|.++|+.+|++..++- +++ +.+ ... +|+++...+
T Consensus 57 ~~e~R~~~l~~l~vd~v~~~-~f~-~~~-~~~---s~~~Fi~~i 94 (180)
T cd02064 57 TLEEKLELLESLGVDYLLVL-PFD-KEF-ASL---SAEEFVEDL 94 (180)
T ss_pred CHHHHHHHHHHcCCCEEEEe-CCC-HHH-HcC---CHHHHHHHH
Confidence 34679999999998764443 577 544 234 788777653
No 73
>COG4274 Uncharacterized conserved protein [Function unknown]
Probab=30.58 E-value=37 Score=24.43 Aligned_cols=61 Identities=20% Similarity=0.315 Sum_probs=40.6
Q ss_pred EEecCCCCHHHHHHHHHHcCCCeEEEEEEE------EEEEC-Ccc----------eEEEEEEEEEEcCCCHHHHHHHHH
Q psy14704 96 MMLGKPEDEEEAKEFLSKLSGNTHSVFTGV------AILTK-DKD----------SRFYNQTQVTFANLTPAVISAYVK 157 (162)
Q Consensus 96 ~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv------~l~~~-~~~----------~~~~~~t~V~F~~l~~~~I~~Yv~ 157 (162)
.+.+||+-.++++++|.++-|+-|.+|--. ++... +.. -.+ .+=.++.+.+|.++...-+.
T Consensus 24 tlke~p~R~~av~~~les~G~k~~~~y~T~GeYD~V~i~EapDda~~~~~~l~l~s~G-nvRt~TL~Afp~~~~~~~lk 101 (104)
T COG4274 24 TLKETPKRAAAVRALLESMGGKVKEQYWTLGEYDVVAIVEAPDDAVATRFSLALASRG-NVRTVTLRAFPVDAMLEILK 101 (104)
T ss_pred HHhhCHHHHHHHHHHHHHcCcEEEEEEEeeccccEEEEEecCCHHHHHHHHHHHHhcC-CeEEEeeccCCHHHHHHHHh
Confidence 367899999999999999999999877543 33321 110 123 33446778888776655544
No 74
>PF12585 DUF3759: Protein of unknown function (DUF3759); InterPro: IPR022234 This family of proteins is found in eukaryotes. Proteins in this family are typically between 107 and 132 amino acids in length. There is a single completely conserved residue H that may be functionally important.
Probab=30.57 E-value=30 Score=24.47 Aligned_cols=20 Identities=40% Similarity=0.569 Sum_probs=17.2
Q ss_pred ecCCCCHHHHHHHHHHcCCC
Q psy14704 98 LGKPEDEEEAKEFLSKLSGN 117 (162)
Q Consensus 98 lgKP~~~~eA~~~L~~lsG~ 117 (162)
=|||.+...|+++|--+.|-
T Consensus 39 ~Gkp~sHa~AKEllAg~aga 58 (93)
T PF12585_consen 39 NGKPVSHAFAKELLAGFAGA 58 (93)
T ss_pred cCCCCcHHHHHHHHHHHHHH
Confidence 48999999999999888764
No 75
>COG1926 Predicted phosphoribosyltransferases [General function prediction only]
Probab=30.40 E-value=97 Score=25.29 Aligned_cols=94 Identities=13% Similarity=0.236 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHhc---ccCCCCCceEEEeceEEee----------------------CCEEecCCCCHHHHHHH
Q psy14704 56 GEYVSELAYKKALEVSQHL---KEDNVEPDLIIGADTVVSI----------------------NDMMLGKPEDEEEAKEF 110 (162)
Q Consensus 56 ~~~v~~lA~~Ka~~v~~~~---~~~~~~~~~vI~aDTvV~~----------------------~g~IlgKP~~~~eA~~~ 110 (162)
.+|+...+..+-.++.++. ... ...+=+..+||+.. .+-++-=|...++|.+.
T Consensus 92 ~~~i~~~~~~e~~El~rrr~~yr~~--~~~~~~~g~~VIlVDDGiATGatm~aAi~~~r~~~~~~IviAVPV~p~~a~~~ 169 (220)
T COG1926 92 DAYIEAAAARERKELLRRREAYRGG--RPVPSLKGRTVILVDDGIATGATMKAAVRALRAKGPKEIVIAVPVAPEDAAAE 169 (220)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC--CCCCCCCCCEEEEEeCCcchhHHHHHHHHHHHhcCCceEEEEcccCCHHHHHH
Confidence 4677777777766776542 111 11122344444433 23578889999999999
Q ss_pred HHHcCCCeEEEEEEEEEEECCcceEEEEEEEEEEcCCCHHHHHHHHHc
Q psy14704 111 LSKLSGNTHSVFTGVAILTKDKDSRFYNQTQVTFANLTPAVISAYVKT 158 (162)
Q Consensus 111 L~~lsG~~h~V~Tgv~l~~~~~~~~~~~~t~V~F~~l~~~~I~~Yv~t 158 (162)
|.++..+...+++--+... +..--=.|+.+|++|..+|+..
T Consensus 170 l~s~~D~vvc~~~P~~F~A-------Vg~~Y~dF~q~sdeEV~~lL~~ 210 (220)
T COG1926 170 LESEADEVVCLYMPAPFEA-------VGEFYRDFRQVSDEEVRALLRR 210 (220)
T ss_pred HHhhcCeEEEEcCCccHHH-------HHHHHHHHhhcCHHHHHHHHHh
Confidence 9999887654444322110 1111124788999999999974
No 76
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=30.14 E-value=1.7e+02 Score=22.10 Aligned_cols=36 Identities=14% Similarity=0.277 Sum_probs=24.9
Q ss_pred hhhhc--CCCcEEEecCCHHH--------------HHHHHhCCCCe-EEecCC
Q psy14704 5 YMGQL--NNLKIVLASSSPRR--------------SQILKSIGLKF-EVIPSN 40 (162)
Q Consensus 5 ~~~~l--~~~~iILAS~SprR--------------~~lL~~~g~~f-~v~~~~ 40 (162)
.++.| +.+++.++|+.+.. ..+|+.+|+.+ .++.++
T Consensus 50 ~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~ii~~~ 102 (166)
T TIGR01664 50 KLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPIQVLAATH 102 (166)
T ss_pred HHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 44555 35789999998763 57899999986 344443
No 77
>KOG3332|consensus
Probab=29.55 E-value=1.3e+02 Score=24.80 Aligned_cols=57 Identities=16% Similarity=0.324 Sum_probs=32.8
Q ss_pred CCHHHHHHHHh---CCCCe---EEe-cCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEE
Q psy14704 19 SSPRRSQILKS---IGLKF---EVI-PSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVV 91 (162)
Q Consensus 19 ~SprR~~lL~~---~g~~f---~v~-~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV 91 (162)
+|-|++||.+. +|++- .++ .+++. +...... +|..++.-+.+ .+ -+...|||+
T Consensus 82 G~iR~kEL~ra~~~lgi~~s~v~~l~~~~f~-Dg~~~~W---d~~~v~~~l~~--------~i--------e~~~~~~ii 141 (247)
T KOG3332|consen 82 GKIREKELHRACAVLGIPLSNVVVLDTPFFQ-DGPGEDW---DPDAVASILLQ--------HI--------EVLNIDTII 141 (247)
T ss_pred chHHHHHHHHHHHHHCCchhheEEecCCcCC-CCccccc---CHHHHHHHHHH--------HH--------HccCccEEE
Confidence 57899999984 78863 222 34444 4443444 67665553322 22 234467777
Q ss_pred eeCC
Q psy14704 92 SIND 95 (162)
Q Consensus 92 ~~~g 95 (162)
++|+
T Consensus 142 TFD~ 145 (247)
T KOG3332|consen 142 TFDN 145 (247)
T ss_pred EecC
Confidence 7765
No 78
>PF09082 DUF1922: Domain of unknown function (DUF1922); InterPro: IPR015166 Members of this family consist of a beta-sheet region followed by an alpha-helix and an unstructured C terminus. The beta-sheet region contains a CXCX...XCXC sequence with Cys residues located in two proximal loops and pointing towards each other. This precise function of this set of bacterial proteins is, as yet, unknown []. ; PDB: 1GH9_A.
Probab=29.05 E-value=63 Score=21.54 Aligned_cols=28 Identities=32% Similarity=0.438 Sum_probs=19.1
Q ss_pred eEEeeCCEEecCCCCHHHHHHHHHHcCC
Q psy14704 89 TVVSINDMMLGKPEDEEEAKEFLSKLSG 116 (162)
Q Consensus 89 TvV~~~g~IlgKP~~~~eA~~~L~~lsG 116 (162)
|+=+..-+||++-.|.+||.++++.|..
T Consensus 28 ~l~vk~~rIl~~~~~~~eA~eiVrklQ~ 55 (68)
T PF09082_consen 28 TLKVKERRILARAENAEEASEIVRKLQE 55 (68)
T ss_dssp EEE--SSS-BS--SSHHHHHHHHHHHSS
T ss_pred eeeeeeEEEEEecCCHHHHHHHHHHHHH
Confidence 4444556899999999999999999963
No 79
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=28.55 E-value=1.8e+02 Score=23.93 Aligned_cols=55 Identities=18% Similarity=0.222 Sum_probs=33.8
Q ss_pred HHHHhCCCC---eEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEece
Q psy14704 25 QILKSIGLK---FEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADT 89 (162)
Q Consensus 25 ~lL~~~g~~---f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDT 89 (162)
++++.+|+. +.+.+.+.+ ...-+ .|.+-+.++...++.+..+... .+.++|||=-
T Consensus 127 ~lv~~~g~s~~~~~vrstdl~---vL~l~---~~~~~~~~~l~~~~~~a~~edg----AeaIiLGCAG 184 (230)
T COG4126 127 ELVRSYGLSRHCRSVRSTDLP---VLALE---GPPEEAEALLVIEAAEALKEDG----AEAIILGCAG 184 (230)
T ss_pred HHHHhcCccccccceeeCCCC---ccccc---CChHHHHHHHHHHHHHHhhhcC----CCEEEEcCcc
Confidence 455667874 345555555 33333 5667777777777766655543 4678888754
No 80
>PRK11590 hypothetical protein; Provisional
Probab=28.07 E-value=51 Score=25.71 Aligned_cols=32 Identities=19% Similarity=0.345 Sum_probs=23.3
Q ss_pred CCcEEEecCCHHH--HHHHHhCCC--CeEEecCCCC
Q psy14704 11 NLKIVLASSSPRR--SQILKSIGL--KFEVIPSNFD 42 (162)
Q Consensus 11 ~~~iILAS~SprR--~~lL~~~g~--~f~v~~~~~d 42 (162)
..+++++|+||+. +.+++.+|+ -..++.+..+
T Consensus 112 G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~ 147 (211)
T PRK11590 112 DADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQ 147 (211)
T ss_pred CCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEE
Confidence 5689999999997 668888885 3455555554
No 81
>KOG1252|consensus
Probab=27.41 E-value=2.7e+02 Score=24.44 Aligned_cols=90 Identities=21% Similarity=0.334 Sum_probs=54.8
Q ss_pred hhhhcCCCcEEE---ecCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccC----
Q psy14704 5 YMGQLNNLKIVL---ASSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKED---- 77 (162)
Q Consensus 5 ~~~~l~~~~iIL---AS~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~---- 77 (162)
+..+++.+++|+ ++-|.-|+.+|+.+|-...-.|+. ... . .| + .|..||..+..+.++.
T Consensus 121 ~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a---~~~---~---~~-e----~ai~~a~~l~~~~pna~~l~ 186 (362)
T KOG1252|consen 121 YMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPA---AGM---K---GP-E----SAIGKAEELLNKTPNAYILD 186 (362)
T ss_pred HHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChH---Hcc---C---Ch-H----HHHHHHHHHHHhCCChHHHH
Confidence 456677888766 688999999999999655433332 221 1 34 2 3556777776665311
Q ss_pred --CCCCceEEEeceEEeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEE
Q psy14704 78 --NVEPDLIIGADTVVSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTG 124 (162)
Q Consensus 78 --~~~~~~vI~aDTvV~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tg 124 (162)
.++....+-.+|+ +.+.|+.++|+.--|+-|
T Consensus 187 Qf~np~Np~~hy~tt----------------g~EI~~q~~g~vDi~V~g 219 (362)
T KOG1252|consen 187 QFHNPGNPLAHYETT----------------GPEIWRQLDGKVDIFVAG 219 (362)
T ss_pred HhcCCCCcccccccc----------------cHHHHHHhcCCCCEEEec
Confidence 1233334555554 677888888887554443
No 82
>COG0807 RibA GTP cyclohydrolase II [Coenzyme metabolism]
Probab=26.98 E-value=2.6e+02 Score=22.32 Aligned_cols=39 Identities=26% Similarity=0.377 Sum_probs=30.1
Q ss_pred chhhhcCCCcEEEecCCHHHHHHHHhCCCCe-EEecCCCC
Q psy14704 4 PYMGQLNNLKIVLASSSPRRSQILKSIGLKF-EVIPSNFD 42 (162)
Q Consensus 4 ~~~~~l~~~~iILAS~SprR~~lL~~~g~~f-~v~~~~~d 42 (162)
.++..|.-.+|-|=|+.|+|..-|...|++. +.+|-.++
T Consensus 134 qIL~dLGI~~irLLtnnp~K~~~l~~~Gi~vverv~~~~~ 173 (193)
T COG0807 134 QILKDLGIKKIRLLTNNPRKIYGLEGFGINVVERVPLIVG 173 (193)
T ss_pred HHHHHcCCcEEEEecCChHHHHHHHhCCceEEEEeecCCC
Confidence 4567777778888899999999999999886 34444444
No 83
>cd03054 GST_N_Metaxin GST_N family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities.
Probab=26.87 E-value=95 Score=19.45 Aligned_cols=30 Identities=30% Similarity=0.361 Sum_probs=21.6
Q ss_pred cEEEecCCHHHHH---HHHhCCCCeEEecCCCC
Q psy14704 13 KIVLASSSPRRSQ---ILKSIGLKFEVIPSNFD 42 (162)
Q Consensus 13 ~iILAS~SprR~~---lL~~~g~~f~v~~~~~d 42 (162)
...|.|.||.-+. .|+..|++|+.+..+.+
T Consensus 9 ~~~~~s~sp~~~~v~~~L~~~~i~~~~~~~~~~ 41 (72)
T cd03054 9 AFGLPSLSPECLKVETYLRMAGIPYEVVFSSNP 41 (72)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCceEEEecCCc
Confidence 4567788888764 45678999998866544
No 84
>COG4017 Uncharacterized protein conserved in archaea [Function unknown]
Probab=26.59 E-value=87 Score=25.56 Aligned_cols=34 Identities=26% Similarity=0.358 Sum_probs=23.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEe
Q psy14704 54 NYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGA 87 (162)
Q Consensus 54 ~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~a 87 (162)
...+.|.++|..|++++..-.......+.+|+|+
T Consensus 20 ~v~Dvv~eI~~~K~~ai~~~~~~~E~~~vli~G~ 53 (254)
T COG4017 20 RVVDVVNEIAKKKYQAIRDFLEGEEFKEVLIFGV 53 (254)
T ss_pred cHHHHHHHHHHHHHHHhhhhhcccCcceEEEEEe
Confidence 4679999999999999984332112245677773
No 85
>cd03028 GRX_PICOT_like Glutaredoxin (GRX) family, PKC-interacting cousin of TRX (PICOT)-like subfamily; composed of PICOT and GRX-PICOT-like proteins. The non-PICOT members of this family contain only the GRX-like domain, whereas PICOT contains an N-terminal TRX-like domain followed by one to three GRX-like domains. It is interesting to note that PICOT from plants contain three repeats of the GRX-like domain, metazoan proteins (except for insect) have two repeats, while fungal sequences contain only one copy of the domain. PICOT is a protein that interacts with protein kinase C (PKC) theta, a calcium independent PKC isoform selectively expressed in skeletal muscle and T lymphocytes. PICOT inhibits the activation of c-Jun N-terminal kinase and the transcription factors, AP-1 and NF-kB, induced by PKC theta or T-cell activating stimuli. Both GRX and TRX domains of PICOT are required for its activity. Characterized non-PICOT members of this family include CXIP1, a CAX-interacting protein
Probab=26.49 E-value=1.5e+02 Score=19.79 Aligned_cols=31 Identities=23% Similarity=0.369 Sum_probs=23.6
Q ss_pred hhcCCCcEEEecCC-------H---HHHHHHHhCCCCeEEe
Q psy14704 7 GQLNNLKIVLASSS-------P---RRSQILKSIGLKFEVI 37 (162)
Q Consensus 7 ~~l~~~~iILAS~S-------p---rR~~lL~~~g~~f~v~ 37 (162)
+.++..++++-|.| | +=+++|+..|++|+.+
T Consensus 3 ~~i~~~~vvvf~k~~~~~~~Cp~C~~ak~~L~~~~i~y~~i 43 (90)
T cd03028 3 KLIKENPVVLFMKGTPEEPRCGFSRKVVQILNQLGVDFGTF 43 (90)
T ss_pred hhhccCCEEEEEcCCCCCCCCcHHHHHHHHHHHcCCCeEEE
Confidence 44566788888764 2 5567999999999988
No 86
>PRK05627 bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed
Probab=26.35 E-value=1.1e+02 Score=25.82 Aligned_cols=35 Identities=14% Similarity=0.493 Sum_probs=25.8
Q ss_pred HHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHH
Q psy14704 21 PRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSE 61 (162)
Q Consensus 21 prR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~ 61 (162)
..|.++|+.+|+++.++ -+|+ +.+. .. +|++++..
T Consensus 73 eeR~~~l~~~gVD~~~~-~~F~-~~~~-~l---s~e~Fi~~ 107 (305)
T PRK05627 73 RDKAELLAELGVDYVLV-LPFD-EEFA-KL---SAEEFIED 107 (305)
T ss_pred HHHHHHHHHcCCCEEEE-ecCC-HHHh-cC---CHHHHHHH
Confidence 66999999999887666 4577 5543 34 78888875
No 87
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=26.14 E-value=2.9e+02 Score=20.85 Aligned_cols=23 Identities=22% Similarity=0.521 Sum_probs=19.4
Q ss_pred CCcEEEecCCHHH--HHHHHhCCCC
Q psy14704 11 NLKIVLASSSPRR--SQILKSIGLK 33 (162)
Q Consensus 11 ~~~iILAS~SprR--~~lL~~~g~~ 33 (162)
..++.++|++++. ..+|+.+|+.
T Consensus 122 g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 122 PKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred CCcEEEECCCCHHHHHHHHHHcCch
Confidence 4689999999887 6778899985
No 88
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=26.11 E-value=1.7e+02 Score=24.70 Aligned_cols=85 Identities=19% Similarity=0.085 Sum_probs=49.4
Q ss_pred hCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------HHHHhcccCCCCCceEEEeceEEeeCCEEecCC
Q psy14704 29 SIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKAL-------EVSQHLKEDNVEPDLIIGADTVVSINDMMLGKP 101 (162)
Q Consensus 29 ~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~-------~v~~~~~~~~~~~~~vI~aDTvV~~~g~IlgKP 101 (162)
+.|.+|.|+ +. |+.+..+ .-...+..|+...-. ++...++ ...-+.+++|||.| .-||-++.|-
T Consensus 148 ~~g~~~~V~---v~-EsrP~~~---G~~~~a~~L~~~gI~vtlI~Dsa~~~~m~-~~~vd~VlvGAd~v-~~nG~v~nk~ 218 (303)
T TIGR00524 148 EDGKRIRVI---AC-ETRPRNQ---GSRLTAWELMQDGIDVTLITDSMAAYFMQ-KGEIDAVIVGADRI-ARNGDVANKI 218 (303)
T ss_pred HcCCceEEE---EC-CCCCccc---hHHHHHHHHHHCCCCEEEEChhHHHHHcc-ccCCCEEEEcccEE-ecCCCEeEhh
Confidence 468889988 44 5544333 223455555543310 1111111 01246899999997 5678888999
Q ss_pred CCHHHHHHHHHHcCCCeEEEEEE
Q psy14704 102 EDEEEAKEFLSKLSGNTHSVFTG 124 (162)
Q Consensus 102 ~~~~eA~~~L~~lsG~~h~V~Tg 124 (162)
.+..=| ++-+..|....|.+.
T Consensus 219 GT~~lA--~~Ak~~~vPv~V~a~ 239 (303)
T TIGR00524 219 GTYQLA--VLAKEFRIPFFVAAP 239 (303)
T ss_pred hHHHHH--HHHHHhCCCEEEecc
Confidence 887644 455666766665553
No 89
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=24.45 E-value=41 Score=23.20 Aligned_cols=20 Identities=30% Similarity=0.459 Sum_probs=17.1
Q ss_pred EEecCCC--CHHHHHHHHHHcC
Q psy14704 96 MMLGKPE--DEEEAKEFLSKLS 115 (162)
Q Consensus 96 ~IlgKP~--~~~eA~~~L~~ls 115 (162)
-+++||. +.+|+.++++...
T Consensus 89 v~~EKP~~~~~~~~~~l~~~a~ 110 (120)
T PF01408_consen 89 VLVEKPLALTLEEAEELVEAAK 110 (120)
T ss_dssp EEEESSSSSSHHHHHHHHHHHH
T ss_pred EEEEcCCcCCHHHHHHHHHHHH
Confidence 4689999 9999999998764
No 90
>PF04405 ScdA_N: Domain of Unknown function (DUF542) ; InterPro: IPR007500 This is a domain of unknown function found at the N terminus of genes involved in cell wall development and nitrous oxide protection. ScdA is required for normal cell growth and development; mutants have an increased level of peptidoglycan cross-linking and aberrant cellular morphology suggesting a role for ScdA in cell wall metabolism []. NorA1, NorA2, and YtfE are involved in the nitrous oxide response. NorA1 and NorA2, which are similar to YtfE, are co-transcribed with the membrane-bound nitrous oxide (NO) reductases. The genes appear to be involved in NO protection but their function is unknown [, ].
Probab=24.08 E-value=35 Score=21.63 Aligned_cols=21 Identities=19% Similarity=0.521 Sum_probs=17.2
Q ss_pred ecCCHHHHHHHHhCCCCeEEe
Q psy14704 17 ASSSPRRSQILKSIGLKFEVI 37 (162)
Q Consensus 17 AS~SprR~~lL~~~g~~f~v~ 37 (162)
+..-|+...+++++||+|=+-
T Consensus 9 v~~~p~~a~vf~~~gIDfCCg 29 (56)
T PF04405_consen 9 VAEDPRAARVFRKYGIDFCCG 29 (56)
T ss_pred HHHChHHHHHHHHcCCcccCC
Confidence 456799999999999998654
No 91
>TIGR00631 uvrb excinuclease ABC, B subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University)
Probab=23.91 E-value=1e+02 Score=28.97 Aligned_cols=39 Identities=15% Similarity=0.135 Sum_probs=26.1
Q ss_pred EeceEEeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEEEEEE
Q psy14704 86 GADTVVSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTGVAIL 128 (162)
Q Consensus 86 ~aDTvV~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tgv~l~ 128 (162)
..+.||..|..++|.|.+.+.-. ...||+..-..|.|+.
T Consensus 510 ~v~lVvi~DadifG~p~~~~~~i----qriGRagR~~~G~vi~ 548 (655)
T TIGR00631 510 EVSLVAILDADKEGFLRSERSLI----QTIGRAARNVNGKVIM 548 (655)
T ss_pred CCcEEEEeCcccccCCCCHHHHH----HHhcCCCCCCCCEEEE
Confidence 45667888999999999986433 3456654444565554
No 92
>COG4073 Uncharacterized protein conserved in archaea [Function unknown]
Probab=23.40 E-value=34 Score=27.05 Aligned_cols=30 Identities=37% Similarity=0.581 Sum_probs=19.8
Q ss_pred cEEEecCCHH-HHHHHH-hCCCCeEEecCCCC
Q psy14704 13 KIVLASSSPR-RSQILK-SIGLKFEVIPSNFD 42 (162)
Q Consensus 13 ~iILAS~Spr-R~~lL~-~~g~~f~v~~~~~d 42 (162)
-+.|||-||| |+++++ .+=+.|++-.-..|
T Consensus 119 gVLlgSVSP~irkr~~~e~lclT~Eip~~~s~ 150 (198)
T COG4073 119 GVLLGSVSPRIRKRIFKEDLCLTLEIPRRGSD 150 (198)
T ss_pred CeEEeecCHHHHHHhcccceEEEEEecCCCCh
Confidence 4789999998 677776 24445665444444
No 93
>PRK05772 translation initiation factor IF-2B subunit alpha; Provisional
Probab=23.24 E-value=2.8e+02 Score=24.31 Aligned_cols=41 Identities=15% Similarity=0.268 Sum_probs=29.5
Q ss_pred CCceEEEeceEEeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEE
Q psy14704 80 EPDLIIGADTVVSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFT 123 (162)
Q Consensus 80 ~~~~vI~aDTvV~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~T 123 (162)
-+.+|+|||.|. .||-++.|-.+..= .++-+..|..-.|..
T Consensus 247 Vd~VivGAD~I~-~NG~v~NKiGTy~l--A~~Ak~~~vPfyV~a 287 (363)
T PRK05772 247 VNNVMVGADRIL-RDGHVFNKIGTFKE--AVIAHELGIPFYALA 287 (363)
T ss_pred CCEEEECccEEe-cCCCEeehhhhHHH--HHHHHHhCCCEEEEc
Confidence 368999999974 56778899998764 456666677655543
No 94
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=22.94 E-value=1.2e+02 Score=24.65 Aligned_cols=91 Identities=25% Similarity=0.180 Sum_probs=49.3
Q ss_pred cCCHH-HHHHHH--hCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHH----------HHHHHHhcccCCCCCceE
Q psy14704 18 SSSPR-RSQILK--SIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKK----------ALEVSQHLKEDNVEPDLI 84 (162)
Q Consensus 18 S~Spr-R~~lL~--~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~K----------a~~v~~~~~~~~~~~~~v 84 (162)
|.|.- .+-|+. ..|-+|+|+.. |+.+..+ -...+..|+... +..+.++ .-+.++
T Consensus 115 ~~S~~v~~~l~~a~~~~~~~~V~v~----es~P~~e----G~~~a~~L~~~gi~v~~i~d~~~~~~m~~-----~vd~Vl 181 (282)
T PF01008_consen 115 GYSSTVERFLLSAKKKGKKFRVIVL----ESRPYNE----GRLMAKELAEAGIPVTLIPDSAVGYVMPR-----DVDKVL 181 (282)
T ss_dssp S--SHHHHHHHHHHHTTEEEEEEEE------TTTTH----HHTHHHHHHHTT-EEEEE-GGGHHHHHHC-----TESEEE
T ss_pred CCchHHHHHHHHHHHcCCeEEEEEc----cCCcchh----hhhHHHHhhhcceeEEEEechHHHHHHHH-----hCCeeE
Confidence 34443 444443 46778988855 3333222 245666665533 1112222 136899
Q ss_pred EEeceEEeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEE
Q psy14704 85 IGADTVVSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTG 124 (162)
Q Consensus 85 I~aDTvV~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tg 124 (162)
||||.|. -||-+++|-.+..=| ++-+..+....|.+.
T Consensus 182 iGad~v~-~nG~v~nk~Gt~~~a--~~Ak~~~vPv~v~~~ 218 (282)
T PF01008_consen 182 IGADAVL-ANGGVVNKVGTLQLA--LAAKEFNVPVYVLAE 218 (282)
T ss_dssp EE-SEEE-TTS-EEEETTHHHHH--HHHHHTT-EEEEE--
T ss_pred EeeeEEe-cCCCEeehhhHHHHH--HHHHhhCCCEEEEcc
Confidence 9999964 677799999988766 466667777666654
No 95
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=22.39 E-value=1.1e+02 Score=25.46 Aligned_cols=25 Identities=32% Similarity=0.406 Sum_probs=21.1
Q ss_pred CcEEEecCCHHHHHHHHhCCCCeEE
Q psy14704 12 LKIVLASSSPRRSQILKSIGLKFEV 36 (162)
Q Consensus 12 ~~iILAS~SprR~~lL~~~g~~f~v 36 (162)
.++|....|+.|.++++++|....+
T Consensus 195 ~~Vi~~~~~~~~~~~a~~lGa~~vi 219 (343)
T PRK09880 195 AEIVCADVSPRSLSLAREMGADKLV 219 (343)
T ss_pred cEEEEEeCCHHHHHHHHHcCCcEEe
Confidence 3688888999999999999987644
No 96
>KOG1548|consensus
Probab=22.26 E-value=2.1e+02 Score=25.16 Aligned_cols=56 Identities=14% Similarity=0.137 Sum_probs=34.3
Q ss_pred CCHHHHHHHHHHcCCCe--EEEEEEEEEEECCcceEEEEEEEEEEcCCCHHHHHHHHHcCC
Q psy14704 102 EDEEEAKEFLSKLSGNT--HSVFTGVAILTKDKDSRFYNQTQVTFANLTPAVISAYVKTRE 160 (162)
Q Consensus 102 ~~~~eA~~~L~~lsG~~--h~V~Tgv~l~~~~~~~~~~~~t~V~F~~l~~~~I~~Yv~tge 160 (162)
.|.++|-..++.|.||+ .+.+||- ++.+.....++.|...+ +.-...++.|++-+|
T Consensus 322 ~n~eeA~~ciq~m~GR~fdgRql~A~--i~DG~t~~~~eet~~D~-e~e~~~~e~f~~~~e 379 (382)
T KOG1548|consen 322 RNNEEADQCIQTMDGRWFDGRQLTAS--IWDGKTKFQTEETNEDE-EEELKRLEKFAAELE 379 (382)
T ss_pred CChHHHHHHHHHhcCeeecceEEEEE--EeCCcceeeeecccchH-HHHHHHHHHHHhhhh
Confidence 67899999999999998 4677764 22333333333343333 233456777776554
No 97
>TIGR02199 rfaE_dom_II rfaE bifunctional protein, domain II. RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. Domain I (TIGR02198) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (this family) adds ADP to yield ADP-D-glycero-D-manno-heptose.
Probab=22.25 E-value=3.3e+02 Score=20.05 Aligned_cols=60 Identities=25% Similarity=0.421 Sum_probs=36.5
Q ss_pred HHHHHHHHhCC-CCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEEeeCCEEec
Q psy14704 21 PRRSQILKSIG-LKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVVSINDMMLG 99 (162)
Q Consensus 21 prR~~lL~~~g-~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV~~~g~Ilg 99 (162)
..|.++|+.+| ++..++ ++ .. +|++++. .++ ++.+|+|.|--. +
T Consensus 65 eeR~~~l~~~~~VD~vi~---f~------~~---~~~~fi~------------~l~----~~~vv~G~d~~~--~----- 109 (144)
T TIGR02199 65 EDRAEVLAALSSVDYVVI---FD------ED---TPEELIG------------ELK----PDILVKGGDYKV--E----- 109 (144)
T ss_pred HHHHHHHHhcCCCCEEEE---CC------CC---CHHHHHH------------HhC----CCEEEECCCCCC--C-----
Confidence 67899999996 887554 44 22 6777774 243 567788877421 1
Q ss_pred CCCCHHHHHHHHHHcCCCeE
Q psy14704 100 KPEDEEEAKEFLSKLSGNTH 119 (162)
Q Consensus 100 KP~~~~eA~~~L~~lsG~~h 119 (162)
+. +..+.++.+.|+..
T Consensus 110 ---~~-~~~~~~~~~g~~v~ 125 (144)
T TIGR02199 110 ---TL-VGAELVESYGGQVV 125 (144)
T ss_pred ---cc-hhHHHHHHcCCEEE
Confidence 11 22456777766544
No 98
>PF06574 FAD_syn: FAD synthetase; InterPro: IPR015864 Riboflavin is converted into catalytically active cofactors (FAD and FMN) by the actions of riboflavin kinase (2.7.1.26 from EC), which converts it into FMN, and FAD synthetase (2.7.7.2 from EC), which adenylates FMN to FAD. Eukaryotes usually have two separate enzymes, while most prokaryotes have a single bifunctional protein that can carry out both catalyses, although exceptions occur in both cases. While eukaryotic monofunctional riboflavin kinase is orthologous to the bifunctional prokaryotic enzyme [], the monofunctional FAD synthetase differs from its prokaryotic counterpart, and is instead related to the PAPS-reductase family []. The bacterial FAD synthetase that is part of the bifunctional enzyme has remote similarity to nucleotidyl transferases and, hence, it may be involved in the adenylylation reaction of FAD synthetases []. This entry represents prokaryotic-type FAD synthetase, which occurs primarily as part of a bifunctional enzyme.; GO: 0003919 FMN adenylyltransferase activity, 0009231 riboflavin biosynthetic process; PDB: 2X0K_B 3OP1_B 1T6Z_A 2I1L_A 1T6Y_B 1T6X_B 1S4M_A 1MRZ_A.
Probab=22.18 E-value=99 Score=23.42 Aligned_cols=75 Identities=17% Similarity=0.419 Sum_probs=44.7
Q ss_pred cCCHHHHHHHHhCCCCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEEeeCCEE
Q psy14704 18 SSSPRRSQILKSIGLKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVVSINDMM 97 (162)
Q Consensus 18 S~SprR~~lL~~~g~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV~~~g~I 97 (162)
++-..|.++|+.+|+++.++- +|+ +.+ ... +|++++..+-. +.+. ...+|+|.|= =
T Consensus 62 ~s~~ek~~~l~~~Gvd~~~~~-~F~-~~~-~~l---s~~~Fi~~iL~-------~~l~----~~~ivvG~Df-------r 117 (157)
T PF06574_consen 62 TSLEEKLELLESLGVDYVIVI-PFT-EEF-ANL---SPEDFIEKILK-------EKLN----VKHIVVGEDF-------R 117 (157)
T ss_dssp S-HHHHHHHHHHTTESEEEEE--CC-CHH-CCS----HHHHHHHHCC-------CHCT----EEEEEEETT--------E
T ss_pred CCHHHHHHHHHHcCCCEEEEe-cch-HHH-HcC---CHHHHHHHHHH-------hcCC----ccEEEEccCc-------c
Confidence 455678999999999876543 576 543 234 79998875211 1221 2356666664 4
Q ss_pred ecCCCCHHHHHHHHHHcCCCe
Q psy14704 98 LGKPEDEEEAKEFLSKLSGNT 118 (162)
Q Consensus 98 lgKP~~~~eA~~~L~~lsG~~ 118 (162)
||| +++--.++|+.+..+.
T Consensus 118 FG~--~~~G~~~~L~~~~~~~ 136 (157)
T PF06574_consen 118 FGK--NRSGDVELLKELGKEY 136 (157)
T ss_dssp ESG--GGEEEHHHHHHCTTTT
T ss_pred CCC--CCCCCHHHHHHhcccC
Confidence 666 3344567888887654
No 99
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=22.12 E-value=92 Score=24.62 Aligned_cols=35 Identities=40% Similarity=0.696 Sum_probs=24.1
Q ss_pred hhhhcCC--CcEEEecCCHH--HHHHHHhCCCC--eEEecC
Q psy14704 5 YMGQLNN--LKIVLASSSPR--RSQILKSIGLK--FEVIPS 39 (162)
Q Consensus 5 ~~~~l~~--~~iILAS~Spr--R~~lL~~~g~~--f~v~~~ 39 (162)
+++.|+. .++.+||+|+| -..+|+.+|+. |..+..
T Consensus 94 ~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~ 134 (221)
T COG0637 94 LLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVT 134 (221)
T ss_pred HHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhcc
Confidence 3445542 68999999995 55678889984 765433
No 100
>cd01211 GAPCenA GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA is a centrosome-associated GTPase activating protein (GAP) for rab 6. It consists of an N-terminal PTB domain and a C-terminal TBC domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=21.80 E-value=3.2e+02 Score=20.40 Aligned_cols=50 Identities=18% Similarity=0.282 Sum_probs=29.3
Q ss_pred CEEecCCCCHHHHHHHHHHcCCCeE----EEE-------E-EEEEEECCc--ceEEEEEEEEEE
Q psy14704 95 DMMLGKPEDEEEAKEFLSKLSGNTH----SVF-------T-GVAILTKDK--DSRFYNQTQVTF 144 (162)
Q Consensus 95 g~IlgKP~~~~eA~~~L~~lsG~~h----~V~-------T-gv~l~~~~~--~~~~~~~t~V~F 144 (162)
-.-++.|+++.||.+....|..+.- .|. - +|.|++..+ .+..+...++.|
T Consensus 11 ct~V~aP~sE~e~~r~m~~l~~~s~~~~i~Vtl~Vp~~seG~V~l~D~~t~~~ias~~I~rI~f 74 (125)
T cd01211 11 CSQLVNPDSENEMKRLMKVLDEQSGAQTINVTLVVPNNIEGTVKLIDAQSNKVIASFSIVNIRF 74 (125)
T ss_pred eEEecCCCCHHHHHHHHHHHHhhcccCCeEEEEEecCCCCceEEEEcCCCCcEEEEEEEEEEEE
Confidence 3445789999999987777743322 121 1 255555433 234556666666
No 101
>KOG0181|consensus
Probab=21.60 E-value=61 Score=26.23 Aligned_cols=18 Identities=39% Similarity=0.635 Sum_probs=16.1
Q ss_pred EEEEcCCCHHHHHHHHHc
Q psy14704 141 QVTFANLTPAVISAYVKT 158 (162)
Q Consensus 141 ~V~F~~l~~~~I~~Yv~t 158 (162)
.=.|+.|+.++|+.|+++
T Consensus 215 ~~~F~~lt~~eI~d~l~~ 232 (233)
T KOG0181|consen 215 ENGFRRLTPAEIEDYLAS 232 (233)
T ss_pred CCceeecCHHHHHHHHhc
Confidence 567999999999999975
No 102
>COG1158 Rho Transcription termination factor [Transcription]
Probab=21.37 E-value=1.3e+02 Score=26.58 Aligned_cols=45 Identities=31% Similarity=0.397 Sum_probs=28.4
Q ss_pred CCeEEecCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceE
Q psy14704 32 LKFEVIPSNFDESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTV 90 (162)
Q Consensus 32 ~~f~v~~~~~deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTv 90 (162)
++=+|++|.|| |....+ --|..+...||+...+.- .++||--|+|
T Consensus 225 V~geViaSTFD-epp~~H-------vqVAE~viEkAKRlVE~~------kDVVILLDSI 269 (422)
T COG1158 225 VKGEVVASTFD-EPPSRH-------VQVAEMVIEKAKRLVEHG------KDVVILLDSI 269 (422)
T ss_pred hcceEEeecCC-Ccchhh-------HHHHHHHHHHHHHHHHcC------CcEEEEehhH
Confidence 34578888888 654322 234456667887777653 4677776755
No 103
>PRK06036 translation initiation factor IF-2B subunit alpha; Provisional
Probab=21.28 E-value=1.4e+02 Score=25.76 Aligned_cols=41 Identities=20% Similarity=0.219 Sum_probs=31.1
Q ss_pred CCceEEEeceEEeeCCEEecCCCCHHHHHHHHHHcCCCeEEEEEE
Q psy14704 80 EPDLIIGADTVVSINDMMLGKPEDEEEAKEFLSKLSGNTHSVFTG 124 (162)
Q Consensus 80 ~~~~vI~aDTvV~~~g~IlgKP~~~~eA~~~L~~lsG~~h~V~Tg 124 (162)
-+.+|+|||.|+. || +..|-.+..= .++-+..|....|...
T Consensus 227 Vd~VivGAd~I~a-nG-v~NKiGT~~l--A~~Ak~~~vPfyV~ap 267 (339)
T PRK06036 227 VDKVIVGADRITR-DA-VFNKIGTYTH--SVLAKEHEIPFYVAAP 267 (339)
T ss_pred CCEEEECccchhh-cC-eehhhhHHHH--HHHHHHhCCCEEEEee
Confidence 3689999999987 48 9999998864 4566777777666554
No 104
>TIGR02631 xylA_Arthro xylose isomerase, Arthrobacter type. This model describes a D-xylose isomerase that is also active as a D-glucose isomerase. It is tetrameric and dependent on a divalent cation Mg2+, Co2+ or Mn2+ as characterized in Arthrobacter. Members of this family differ substantially from the D-xylose isomerases of family TIGR02630.
Probab=21.08 E-value=4.3e+02 Score=23.01 Aligned_cols=77 Identities=21% Similarity=0.245 Sum_probs=37.2
Q ss_pred HHHHHhCCCCeEEecCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCCceEEEeceEEeeCCEE---ec
Q psy14704 24 SQILKSIGLKFEVIPSNF-DESSIPVSKFKSNYGEYVSELAYKKALEVSQHLKEDNVEPDLIIGADTVVSINDMM---LG 99 (162)
Q Consensus 24 ~~lL~~~g~~f~v~~~~~-deE~~~~~~~~~~p~~~v~~lA~~Ka~~v~~~~~~~~~~~~~vI~aDTvV~~~g~I---lg 99 (162)
++.|+..|+.+..+.++. -.-......+. +|..-+.+-|..+.+...+.- --+||++|++..|.. +.
T Consensus 74 k~~L~~~GL~v~~v~~nl~~~~~~~~g~la-s~d~~vR~~ai~~~kraId~A--------~eLGa~~v~v~~G~~g~~~~ 144 (382)
T TIGR02631 74 KKALDETGLKVPMVTTNLFSHPVFKDGGFT-SNDRSVRRYALRKVLRNMDLG--------AELGAETYVVWGGREGAEYD 144 (382)
T ss_pred HHHHHHhCCeEEEeeccccCCccccCCCCC-CCCHHHHHHHHHHHHHHHHHH--------HHhCCCEEEEccCCCCCcCc
Confidence 567888999987766542 10001111222 333333334444443333221 136788878777743 12
Q ss_pred CCCCHHHHHH
Q psy14704 100 KPEDEEEAKE 109 (162)
Q Consensus 100 KP~~~~eA~~ 109 (162)
...+.+++++
T Consensus 145 ~~~d~~~a~~ 154 (382)
T TIGR02631 145 GAKDVRAALD 154 (382)
T ss_pred cccCHHHHHH
Confidence 3344555544
No 105
>cd00136 PDZ PDZ domain, also called DHR (Dlg homologous region) or GLGF (after a conserved sequence motif). Many PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. Heterodimerization through PDZ-PDZ domain interactions adds to the domain's versatility, and PDZ domain-mediated interactions may be modulated dynamically through target phosphorylation. Some PDZ domains play a role in scaffolding supramolecular complexes. PDZ domains are found in diverse signaling proteins in bacteria, archebacteria, and eurkayotes. This CD contains two distinct structural subgroups with either a N- or C-terminal beta-strand forming the peptide-binding groove base. The circular permutation placing the strand on the N-terminus appears to be found in Eumetazoa only, while the C-terminal variant is found in all three kingdoms of life, and seems to co-occur with protease domains. PDZ domains have been named after PSD95(pos
Probab=20.94 E-value=2e+02 Score=17.57 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=20.5
Q ss_pred eceEEeeCCEEe-cCCCCHHHHHHHHHHcCCCeEE
Q psy14704 87 ADTVVSINDMML-GKPEDEEEAKEFLSKLSGNTHS 120 (162)
Q Consensus 87 aDTvV~~~g~Il-gKP~~~~eA~~~L~~lsG~~h~ 120 (162)
.|.|+..||+-+ +.+ .+++.++|+...|....
T Consensus 34 GD~I~~Ing~~v~~~~--~~~~~~~l~~~~g~~v~ 66 (70)
T cd00136 34 GDVILAVNGTDVKNLT--LEDVAELLKKEVGEKVT 66 (70)
T ss_pred CCEEEEECCEECCCCC--HHHHHHHHhhCCCCeEE
Confidence 577777777622 222 47888888877665544
No 106
>PRK05456 ATP-dependent protease subunit HslV; Provisional
Probab=20.75 E-value=90 Score=24.15 Aligned_cols=21 Identities=14% Similarity=0.316 Sum_probs=15.7
Q ss_pred CCceEEEeceEEeeCCEEecC
Q psy14704 80 EPDLIIGADTVVSINDMMLGK 100 (162)
Q Consensus 80 ~~~~vI~aDTvV~~~g~IlgK 100 (162)
++.+||+|||-+..++-|.-|
T Consensus 10 ~dgVvlaaD~r~s~g~~v~~~ 30 (172)
T PRK05456 10 NGKVAIAGDGQVTLGNTVMKG 30 (172)
T ss_pred CCEEEEEECCceEeCcEEEcC
Confidence 467999999998877654444
No 107
>TIGR00505 ribA GTP cyclohydrolase II. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal. The function of archaeal members of the family has not been demonstrated and is assigned tentatively.
Probab=20.65 E-value=1.4e+02 Score=23.34 Aligned_cols=31 Identities=26% Similarity=0.502 Sum_probs=25.4
Q ss_pred chhhhcCCCcEEEecCCHHHHHHHHhCCCCe
Q psy14704 4 PYMGQLNNLKIVLASSSPRRSQILKSIGLKF 34 (162)
Q Consensus 4 ~~~~~l~~~~iILAS~SprR~~lL~~~g~~f 34 (162)
.++..|.-.++.|-|++|++..=|+..|++.
T Consensus 132 QIL~dLGV~~~rLLtn~~~k~~~L~g~gleV 162 (191)
T TIGR00505 132 DILEDLGVKKVRLLTNNPKKIEILKKAGINI 162 (191)
T ss_pred HHHHHcCCCEEEECCCCHHHHHHHHhCCCEE
Confidence 3566777778999999998888899888775
No 108
>KOG1466|consensus
Probab=20.62 E-value=2e+02 Score=24.45 Aligned_cols=24 Identities=21% Similarity=0.332 Sum_probs=17.0
Q ss_pred CceEEEeceEEeeCCEEecCCCCHH
Q psy14704 81 PDLIIGADTVVSINDMMLGKPEDEE 105 (162)
Q Consensus 81 ~~~vI~aDTvV~~~g~IlgKP~~~~ 105 (162)
+.+++|||-||..+|. +.|=.+.+
T Consensus 200 D~VlVGAEGVvEsGGI-IN~iGTyq 223 (313)
T KOG1466|consen 200 DLVLVGAEGVVESGGI-INKIGTYQ 223 (313)
T ss_pred cEEEEccceeeecCce-eeecccch
Confidence 6789999999887774 45544443
No 109
>PF08557 Lipid_DES: Sphingolipid Delta4-desaturase (DES); InterPro: IPR013866 Sphingolipids are important membrane signalling molecules involved in many different cellular functions in eukaryotes. Sphingolipid delta 4-desaturase catalyses the formation of (E)-sphing-4-enine []. Some proteins in this entry have bifunctional delta 4-desaturase/C-4-hydroxylase activity. Delta 4-desaturated sphingolipids may play a role in early signalling required for entry into meiotic and spermatid differentiation pathways during Drosophila spermatogenesis []. This small protein associates with FA_desaturase IPR005804 from INTERPRO and appears to be specific to sphingolipid delta 4-desaturase. ; GO: 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0006633 fatty acid biosynthetic process, 0055114 oxidation-reduction process, 0016021 integral to membrane
Probab=20.60 E-value=60 Score=19.29 Aligned_cols=10 Identities=50% Similarity=0.800 Sum_probs=7.9
Q ss_pred CHHHHHHHHh
Q psy14704 20 SPRRSQILKS 29 (162)
Q Consensus 20 SprR~~lL~~ 29 (162)
..||++||++
T Consensus 16 ~~RRk~IL~k 25 (39)
T PF08557_consen 16 ASRRKEILKK 25 (39)
T ss_pred HHHHHHHHHh
Confidence 3589999985
Done!