BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14708
(513 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307172263|gb|EFN63768.1| Chromodomain-helicase-DNA-binding protein 7 [Camponotus floridanus]
Length = 4304
Score = 382 bits (981), Expect = e-103, Method: Composition-based stats.
Identities = 180/214 (84%), Positives = 200/214 (93%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ASR MLQEYE++++N+K Q IK DL KF+VLITTFEIII+D EL+ +NWRLC+IDE
Sbjct: 1761 SAASRTMLQEYEVYYKNEKGQQIK--DLVKFNVLITTFEIIITDFNELRGYNWRLCVIDE 1818
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLR L+LEHRVLLSGTPLQNNVNELFSLLNFLEPQQFS+NEAF+ EF
Sbjct: 1819 AHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSSNEAFLKEF 1878
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G L +E EVNKLQLLLKPMMLRRLKEDVEKS+APKEETVVEVELTNIQKKYYRGILERNF
Sbjct: 1879 GNLSSEGEVNKLQLLLKPMMLRRLKEDVEKSLAPKEETVVEVELTNIQKKYYRGILERNF 1938
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFL+KGTTSAN+PNLMNTMMELRKCCIHP+LLNG
Sbjct: 1939 SFLAKGTTSANIPNLMNTMMELRKCCIHPFLLNG 1972
Score = 196 bits (499), Expect = 2e-47, Method: Composition-based stats.
Identities = 88/126 (69%), Positives = 101/126 (80%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
KPKKKP A+ WVKLE+SP+YKN+N+LR YQLEGLNWL+FSW+NG NCILAD
Sbjct: 1655 KPKKKPNAAAWVKLEESPIYKNNNSLRPYQLEGLNWLLFSWYNGHNCILAD--------- 1705
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
EMGLGKTIQSLTFVDAV+K GIRGPFL+IAPLSTIPNWQREFE+WTD+NV
Sbjct: 1706 ----------EMGLGKTIQSLTFVDAVYKYGIRGPFLIIAPLSTIPNWQREFESWTDMNV 1755
Query: 126 IVYHAT 131
+VYH +
Sbjct: 1756 VVYHGS 1761
Score = 105 bits (263), Expect = 5e-20, Method: Composition-based stats.
Identities = 49/82 (59%), Positives = 64/82 (78%), Gaps = 3/82 (3%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLA 251
GR KK RRDK + K+ +YVP++GEV+YG+W+RSECFKVERGLLTFGWGRW+E L
Sbjct: 2305 GRSKK--RRDKFKKTRKFYD-EYVPREGEVVYGSWARSECFKVERGLLTFGWGRWEEILQ 2361
Query: 252 NNEFRNGWTEEYVEELARLLDL 273
+++FR GW E VE+ AR++ L
Sbjct: 2362 HSQFRRGWREIDVEDCARVILL 2383
Score = 92.0 bits (227), Expect = 6e-16, Method: Composition-based stats.
Identities = 37/43 (86%), Positives = 42/43 (97%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FVDAV+K GIRGPFL+IAPLSTIPNWQREFE+WTD+NV+VYHG
Sbjct: 1718 FVDAVYKYGIRGPFLIIAPLSTIPNWQREFESWTDMNVVVYHG 1760
>gi|328724512|ref|XP_001948282.2| PREDICTED: hypothetical protein LOC100164870 [Acyrthosiphon pisum]
Length = 4192
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 179/214 (83%), Positives = 196/214 (91%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+S SRNM+Q+YE+++RN+K IK D+ KF VLITTFE IISDC+EL+D WRLC+IDE
Sbjct: 1693 SSHSRNMVQQYEMYYRNEKGAIIK--DISKFDVLITTFETIISDCMELRDIGWRLCVIDE 1750
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLR L+LEHRVLLSGTPLQNNVNELFSLLNFLEP QFS+ E F+ EF
Sbjct: 1751 AHRLKNRNCKLLEGLRALNLEHRVLLSGTPLQNNVNELFSLLNFLEPTQFSSCEDFLQEF 1810
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LK+E+EV KLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE+NF
Sbjct: 1811 GALKSETEVQKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILEKNF 1870
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG
Sbjct: 1871 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 1904
Score = 194 bits (492), Expect = 1e-46, Method: Composition-based stats.
Identities = 89/126 (70%), Positives = 99/126 (78%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
KPKKKP +DWVKL+KSP YK++NTLR YQLEGLNWL+FSW+NGRNCILADEMGLG
Sbjct: 1587 KPKKKPSPNDWVKLDKSPTYKSNNTLREYQLEGLNWLLFSWYNGRNCILADEMGLG---- 1642
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
KTIQSLTF+ AV + G+RGPFLVIAPLSTIPNWQREFEAWTDLNV
Sbjct: 1643 ---------------KTIQSLTFIHAVHEYGVRGPFLVIAPLSTIPNWQREFEAWTDLNV 1687
Query: 126 IVYHAT 131
IVYH +
Sbjct: 1688 IVYHGS 1693
Score = 109 bits (273), Expect = 3e-21, Method: Composition-based stats.
Identities = 45/71 (63%), Positives = 57/71 (80%)
Query: 203 ERLRLKYVAADYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEE 262
++LR K++ DYVPKDGEV YG W+RSECFKVERG+LTFGW RW E + +N+FR GW E
Sbjct: 2247 KKLRTKFIPDDYVPKDGEVAYGCWTRSECFKVERGILTFGWSRWPEIIQHNDFREGWRES 2306
Query: 263 YVEELARLLDL 273
VE+LAR++ L
Sbjct: 2307 DVEDLARIVIL 2317
Score = 87.8 bits (216), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/43 (86%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ AV + G+RGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG
Sbjct: 1650 FIHAVHEYGVRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 1692
>gi|307197292|gb|EFN78584.1| Chromodomain-helicase-DNA-binding protein 7 [Harpegnathos saltator]
Length = 4395
Score = 376 bits (965), Expect = e-101, Method: Composition-based stats.
Identities = 177/214 (82%), Positives = 199/214 (92%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ASR MLQEYE++++N+K Q IK DL KF+VLITTFEIII+D EL+ +NWRLC+IDE
Sbjct: 1849 SAASRTMLQEYEVYYKNEKGQQIK--DLVKFNVLITTFEIIITDFNELRGYNWRLCVIDE 1906
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLR L+LEHRVLLSGTPLQNNVNELFSLLNFLEP QFS++EAF+ EF
Sbjct: 1907 AHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPVQFSSSEAFLKEF 1966
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G L +E EV+KLQLLLKPMMLRRLKEDVEKS+APKEETVVEVELTNIQKKYYRGILERNF
Sbjct: 1967 GNLSSEGEVHKLQLLLKPMMLRRLKEDVEKSLAPKEETVVEVELTNIQKKYYRGILERNF 2026
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFL+KGTTSAN+PNLMNTMMELRKCCIHP+LLNG
Sbjct: 2027 SFLAKGTTSANIPNLMNTMMELRKCCIHPFLLNG 2060
Score = 195 bits (495), Expect = 5e-47, Method: Composition-based stats.
Identities = 87/126 (69%), Positives = 101/126 (80%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
KPKKKP A+ WVKLE+SP+YK++N+LR YQLEGLNWL+FSW+NG NCILAD
Sbjct: 1743 KPKKKPNAAAWVKLEESPIYKSNNSLRPYQLEGLNWLLFSWYNGHNCILAD--------- 1793
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
EMGLGKTIQSLTFVDAV+K GIRGPFL+IAPLSTIPNWQREFE+WTD+NV
Sbjct: 1794 ----------EMGLGKTIQSLTFVDAVYKYGIRGPFLIIAPLSTIPNWQREFESWTDMNV 1843
Query: 126 IVYHAT 131
+VYH +
Sbjct: 1844 VVYHGS 1849
Score = 107 bits (267), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLA 251
GR KK RRDK + + +YVP++GEV+YG+W+RSECFKVERGLLTFGWGRW+E L
Sbjct: 2393 GRGKK--RRDKFNKKTRKFYDEYVPREGEVVYGSWARSECFKVERGLLTFGWGRWEEILQ 2450
Query: 252 NNEFRNGWTEEYVEELARLLDL 273
+++FR GW E VE+ AR++ L
Sbjct: 2451 HSQFRRGWREVDVEDCARVILL 2472
Score = 92.4 bits (228), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/43 (86%), Positives = 42/43 (97%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FVDAV+K GIRGPFL+IAPLSTIPNWQREFE+WTD+NV+VYHG
Sbjct: 1806 FVDAVYKYGIRGPFLIIAPLSTIPNWQREFESWTDMNVVVYHG 1848
>gi|270007595|gb|EFA04043.1| hypothetical protein TcasGA2_TC014275 [Tribolium castaneum]
Length = 4075
Score = 375 bits (962), Expect = e-101, Method: Composition-based stats.
Identities = 174/214 (81%), Positives = 197/214 (92%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ASRNM+QEYE+FF+ND+ I+ DL KF++LITTFEII++D +LK FNWR+C+IDE
Sbjct: 1666 SAASRNMIQEYEMFFKNDRGHHIR--DLTKFNILITTFEIIVTDFADLKGFNWRICVIDE 1723
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLR L+LEHRVLLSGTPLQNNVNELFSLLNFLEPQQF ++E+F+ EF
Sbjct: 1724 AHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFPSSESFLQEF 1783
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LK+E EV KLQL+LKPMMLRRLKEDVEKS+APKEETVVEVELTNIQKKYYR ILERNF
Sbjct: 1784 GALKSEQEVQKLQLILKPMMLRRLKEDVEKSLAPKEETVVEVELTNIQKKYYRAILERNF 1843
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFLSKGTT AN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 1844 SFLSKGTTHANIPNLMNTMMELRKCCIHPYLLNG 1877
Score = 172 bits (437), Expect = 3e-40, Method: Composition-based stats.
Identities = 81/131 (61%), Positives = 97/131 (74%), Gaps = 21/131 (16%)
Query: 16 WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
WVKL+KSP+YK N+LR YQLEGLNWL+FSW+NGRNCILADEMGLG
Sbjct: 1570 WVKLDKSPIYKGGNSLREYQLEGLNWLLFSWYNGRNCILADEMGLG-------------- 1615
Query: 76 EMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVV- 134
KTIQSLTF++AV++ GIRGPFLVIAPLSTIPNWQRE E+WT++NVIVYH +
Sbjct: 1616 -----KTIQSLTFLNAVWEYGIRGPFLVIAPLSTIPNWQREIESWTEMNVIVYHGSAASR 1670
Query: 135 -LLQTGSKFFR 144
++Q FF+
Sbjct: 1671 NMIQEYEMFFK 1681
Score = 93.6 bits (231), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 60/85 (70%), Gaps = 7/85 (8%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKDGE---VLYGNWSRSECFKVERGLLTFGWGRWKE 248
G R + S+ K+RLR DY+P++G+ ++YG+W+R ECF VERGLLTFGWGRW E
Sbjct: 2209 GIRSRRSKLKKKRLR----GDDYIPREGDRSDIVYGSWARRECFMVERGLLTFGWGRWLE 2264
Query: 249 FLANNEFRNGWTEEYVEELARLLDL 273
L +++ R GW E+ VE+ AR++ L
Sbjct: 2265 ILQHSQLRKGWREQDVEDCARVILL 2289
Score = 83.2 bits (204), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/43 (79%), Positives = 41/43 (95%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F++AV++ GIRGPFLVIAPLSTIPNWQRE E+WT++NVIVYHG
Sbjct: 1623 FLNAVWEYGIRGPFLVIAPLSTIPNWQREIESWTEMNVIVYHG 1665
>gi|242011216|ref|XP_002426351.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510428|gb|EEB13613.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 4944
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/214 (82%), Positives = 198/214 (92%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++AS M+QEYE +F+NDK +K DL+KF+VLITTFE+II+ ELK FNWRLC+IDE
Sbjct: 2199 SAASLQMIQEYEFYFKNDKGNLMK--DLHKFNVLITTFELIITHSQELKSFNWRLCVIDE 2256
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLRLL++EHRVLLSGTPLQNNVNELFSLLNFLEP QFS+++AF+ EF
Sbjct: 2257 AHRLKNRNCKLLEGLRLLNMEHRVLLSGTPLQNNVNELFSLLNFLEPAQFSSSDAFLQEF 2316
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTESEVNKLQ +LKPMMLRR+KEDVEKS+APKEETVVEVELTNIQKKYYRGILERNF
Sbjct: 2317 GALKTESEVNKLQAILKPMMLRRMKEDVEKSLAPKEETVVEVELTNIQKKYYRGILERNF 2376
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFLSKGTTS+N+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 2377 SFLSKGTTSSNIPNLMNTMMELRKCCIHPYLLNG 2410
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/130 (66%), Positives = 96/130 (73%), Gaps = 19/130 (14%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K KK+P W KLEKSPV+KN+NTLR YQLEGLNWL+FSW NGRNCIL
Sbjct: 2093 KAKKRPQPDQWRKLEKSPVFKNNNTLRLYQLEGLNWLLFSWHNGRNCIL----------- 2141
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
ADEMGLGKTIQSL FV++V+ GIRGPFLVIAPLSTIPNWQREFEAWTDLNV
Sbjct: 2142 --------ADEMGLGKTIQSLAFVNSVYNYGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 2193
Query: 126 IVYHATFVVL 135
+VYH + L
Sbjct: 2194 VVYHGSAASL 2203
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 48/62 (77%)
Query: 210 VAADYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELAR 269
+ +Y KDG++LYG WSRSECFKVE+GLLTFGW RW E + N +FR GWT + VE+ AR
Sbjct: 2768 LGEEYGIKDGDILYGTWSRSECFKVEKGLLTFGWDRWPEIMYNTQFRKGWTVQNVEDCAR 2827
Query: 270 LL 271
++
Sbjct: 2828 VI 2829
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/48 (79%), Positives = 42/48 (87%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKL 197
FV++V+ GIRGPFLVIAPLSTIPNWQREFEAWTDLNV+VYHG L
Sbjct: 2156 FVNSVYNYGIRGPFLVIAPLSTIPNWQREFEAWTDLNVVVYHGSAASL 2203
>gi|383850307|ref|XP_003700737.1| PREDICTED: uncharacterized protein LOC100883463 [Megachile rotundata]
Length = 4199
Score = 375 bits (962), Expect = e-101, Method: Composition-based stats.
Identities = 178/214 (83%), Positives = 200/214 (93%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ASR MLQEYE++++N+K Q IK DL KF+VLITTFEIII+D EL+ +NWRLC+IDE
Sbjct: 1716 SAASRTMLQEYEVYYKNEKGQQIK--DLIKFNVLITTFEIIITDFNELRGYNWRLCVIDE 1773
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLR L+LEHRVLLSGTPLQNNVNELFSLLNFLEP QFS++EAF+ EF
Sbjct: 1774 AHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPVQFSSSEAFLKEF 1833
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G L +ESEV+KLQLLLKPMMLRRLKEDVEKS+APKEETVVEVELTNIQKKYYRGILERNF
Sbjct: 1834 GNLSSESEVHKLQLLLKPMMLRRLKEDVEKSLAPKEETVVEVELTNIQKKYYRGILERNF 1893
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFL+KGTTSAN+PNLMNTMMELRKCCIHP+LLNG
Sbjct: 1894 SFLAKGTTSANIPNLMNTMMELRKCCIHPFLLNG 1927
Score = 197 bits (500), Expect = 1e-47, Method: Composition-based stats.
Identities = 89/126 (70%), Positives = 101/126 (80%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
KPKKKP AS WVKLE+SP+YKN+N+LR YQLEGLNWL+FSW+NG NCILAD
Sbjct: 1610 KPKKKPNASAWVKLEESPIYKNNNSLRPYQLEGLNWLLFSWYNGHNCILAD--------- 1660
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
EMGLGKTIQSLTFVDAV+K GIRGPFL+IAPLSTIPNWQREFE+WTD+NV
Sbjct: 1661 ----------EMGLGKTIQSLTFVDAVYKYGIRGPFLIIAPLSTIPNWQREFESWTDMNV 1710
Query: 126 IVYHAT 131
+VYH +
Sbjct: 1711 VVYHGS 1716
Score = 107 bits (266), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLA 251
GR KK RRDK + + +YVP++GEV+YG+W+RSECFKVERGLLTFGWGRW+E L
Sbjct: 2259 GRGKK--RRDKFSKKTRKFCDEYVPREGEVVYGSWARSECFKVERGLLTFGWGRWEEILQ 2316
Query: 252 NNEFRNGWTEEYVEELARLLDL 273
+++FR GW E VE+ AR++ L
Sbjct: 2317 HSQFRRGWREVDVEDCARVILL 2338
Score = 91.7 bits (226), Expect = 8e-16, Method: Composition-based stats.
Identities = 37/43 (86%), Positives = 42/43 (97%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FVDAV+K GIRGPFL+IAPLSTIPNWQREFE+WTD+NV+VYHG
Sbjct: 1673 FVDAVYKYGIRGPFLIIAPLSTIPNWQREFESWTDMNVVVYHG 1715
>gi|189237363|ref|XP_970443.2| PREDICTED: similar to kismet CG3696-PA [Tribolium castaneum]
Length = 4044
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 174/214 (81%), Positives = 197/214 (92%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ASRNM+QEYE+FF+ND+ I+ DL KF++LITTFEII++D +LK FNWR+C+IDE
Sbjct: 1635 SAASRNMIQEYEMFFKNDRGHHIR--DLTKFNILITTFEIIVTDFADLKGFNWRICVIDE 1692
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLR L+LEHRVLLSGTPLQNNVNELFSLLNFLEPQQF ++E+F+ EF
Sbjct: 1693 AHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFPSSESFLQEF 1752
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LK+E EV KLQL+LKPMMLRRLKEDVEKS+APKEETVVEVELTNIQKKYYR ILERNF
Sbjct: 1753 GALKSEQEVQKLQLILKPMMLRRLKEDVEKSLAPKEETVVEVELTNIQKKYYRAILERNF 1812
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFLSKGTT AN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 1813 SFLSKGTTHANIPNLMNTMMELRKCCIHPYLLNG 1846
Score = 172 bits (436), Expect = 4e-40, Method: Composition-based stats.
Identities = 81/131 (61%), Positives = 97/131 (74%), Gaps = 21/131 (16%)
Query: 16 WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
WVKL+KSP+YK N+LR YQLEGLNWL+FSW+NGRNCILADEMGLG
Sbjct: 1539 WVKLDKSPIYKGGNSLREYQLEGLNWLLFSWYNGRNCILADEMGLG-------------- 1584
Query: 76 EMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVV- 134
KTIQSLTF++AV++ GIRGPFLVIAPLSTIPNWQRE E+WT++NVIVYH +
Sbjct: 1585 -----KTIQSLTFLNAVWEYGIRGPFLVIAPLSTIPNWQREIESWTEMNVIVYHGSAASR 1639
Query: 135 -LLQTGSKFFR 144
++Q FF+
Sbjct: 1640 NMIQEYEMFFK 1650
Score = 93.6 bits (231), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 60/85 (70%), Gaps = 7/85 (8%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKDGE---VLYGNWSRSECFKVERGLLTFGWGRWKE 248
G R + S+ K+RLR DY+P++G+ ++YG+W+R ECF VERGLLTFGWGRW E
Sbjct: 2178 GIRSRRSKLKKKRLR----GDDYIPREGDRSDIVYGSWARRECFMVERGLLTFGWGRWLE 2233
Query: 249 FLANNEFRNGWTEEYVEELARLLDL 273
L +++ R GW E+ VE+ AR++ L
Sbjct: 2234 ILQHSQLRKGWREQDVEDCARVILL 2258
Score = 82.8 bits (203), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/43 (79%), Positives = 41/43 (95%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F++AV++ GIRGPFLVIAPLSTIPNWQRE E+WT++NVIVYHG
Sbjct: 1592 FLNAVWEYGIRGPFLVIAPLSTIPNWQREIESWTEMNVIVYHG 1634
>gi|350424228|ref|XP_003493728.1| PREDICTED: hypothetical protein LOC100744744 [Bombus impatiens]
Length = 4166
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/214 (83%), Positives = 200/214 (93%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ASR MLQEYE++++N+K Q IK DL KF+VLITTFEIII+D EL+ +NWRLC+IDE
Sbjct: 1711 SAASRTMLQEYEVYYKNEKGQQIK--DLIKFNVLITTFEIIITDFNELRGYNWRLCVIDE 1768
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLR L+LEHRVLLSGTPLQNNVNELFSLLNFLEP QFS++EAF+ EF
Sbjct: 1769 AHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPVQFSSSEAFLKEF 1828
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G L +ESEV+KLQLLLKPMMLRRLKEDVEKS+APKEETVVEVELTNIQKKYYRGILERNF
Sbjct: 1829 GNLSSESEVHKLQLLLKPMMLRRLKEDVEKSLAPKEETVVEVELTNIQKKYYRGILERNF 1888
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFL+KGTTSAN+PNLMNTMMELRKCCIHP+LLNG
Sbjct: 1889 SFLAKGTTSANIPNLMNTMMELRKCCIHPFLLNG 1922
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 107/141 (75%), Gaps = 21/141 (14%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
KPKKKP AS WVKLE+SP+YKN+N+LR YQLEGLNWL+FSW+NG NCILA
Sbjct: 1605 KPKKKPNASAWVKLEESPIYKNNNSLRPYQLEGLNWLLFSWYNGHNCILA---------- 1654
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
DEMGLGKTIQSLTFVDAV+K GIRGPFL+IAPLSTIPNWQREFE+WTD+NV
Sbjct: 1655 ---------DEMGLGKTIQSLTFVDAVYKYGIRGPFLIIAPLSTIPNWQREFESWTDMNV 1705
Query: 126 IVYHATFV--VLLQTGSKFFR 144
+VYH + +LQ +++
Sbjct: 1706 VVYHGSAASRTMLQEYEVYYK 1726
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 62/80 (77%), Gaps = 2/80 (2%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLA 251
GR KK RRDK + + +YVP++GEV+YG+W+RSECFKVERGLLTFGWGRW+E L
Sbjct: 2254 GRGKK--RRDKFGKKTRKFCDEYVPREGEVVYGSWARSECFKVERGLLTFGWGRWEEILQ 2311
Query: 252 NNEFRNGWTEEYVEELARLL 271
+++FR GW E VE+ AR++
Sbjct: 2312 HSQFRRGWREVDVEDCARVI 2331
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 42/43 (97%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FVDAV+K GIRGPFL+IAPLSTIPNWQREFE+WTD+NV+VYHG
Sbjct: 1668 FVDAVYKYGIRGPFLIIAPLSTIPNWQREFESWTDMNVVVYHG 1710
>gi|345486061|ref|XP_001602898.2| PREDICTED: hypothetical protein LOC100119051 [Nasonia vitripennis]
Length = 4819
Score = 373 bits (958), Expect = e-100, Method: Composition-based stats.
Identities = 175/214 (81%), Positives = 199/214 (92%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ASRNM+ +YE++++NDK Q IK DL KF+VLITTFEIII+D ELK +NWRLC+IDE
Sbjct: 2065 SAASRNMISDYEVYYKNDKGQQIK--DLIKFNVLITTFEIIITDFNELKGYNWRLCVIDE 2122
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLR L+LEHRVLLSGTPLQNNVNELFSLLNFLEP QFS++EAF+ EF
Sbjct: 2123 AHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPNQFSSSEAFLKEF 2182
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G L +E EV+KLQ+LLKPMMLRRLKEDVEKS+APK+ETVVEVELTNIQKKYYRGILERNF
Sbjct: 2183 GNLSSEDEVHKLQVLLKPMMLRRLKEDVEKSLAPKQETVVEVELTNIQKKYYRGILERNF 2242
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFL+KGTTSAN+PNLMNTMMELRKCCIHP+LLNG
Sbjct: 2243 SFLAKGTTSANIPNLMNTMMELRKCCIHPFLLNG 2276
Score = 185 bits (469), Expect = 5e-44, Method: Composition-based stats.
Identities = 85/126 (67%), Positives = 95/126 (75%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
KPKKKP S WVKL++SPVYK N+LR YQLEGLNWL+FSW+N
Sbjct: 1959 KPKKKPMPSQWVKLDESPVYKAGNSLRPYQLEGLNWLLFSWYN----------------- 2001
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
NCILADEMGLGKTIQSLTFV+ V+K GIRGPFL+IAPLSTIPNWQREFE WTD+NV
Sbjct: 2002 --NHNCILADEMGLGKTIQSLTFVNEVYKYGIRGPFLIIAPLSTIPNWQREFEGWTDMNV 2059
Query: 126 IVYHAT 131
IVYH +
Sbjct: 2060 IVYHGS 2065
Score = 100 bits (250), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/78 (53%), Positives = 58/78 (74%)
Query: 196 KLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEF 255
K +DK + + +YVP++GEV+YGNW+RSECFKVERGLLTFGWGRW+E L +++
Sbjct: 2612 KKRSKDKFNKKTRKFYDEYVPREGEVVYGNWARSECFKVERGLLTFGWGRWEEILKHSQL 2671
Query: 256 RNGWTEEYVEELARLLDL 273
R GW E +E+ AR++ L
Sbjct: 2672 RRGWRESDLEDCARVILL 2689
Score = 88.6 bits (218), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/43 (83%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV+ V+K GIRGPFL+IAPLSTIPNWQREFE WTD+NVIVYHG
Sbjct: 2022 FVNEVYKYGIRGPFLIIAPLSTIPNWQREFEGWTDMNVIVYHG 2064
>gi|332022432|gb|EGI62740.1| Chromodomain-helicase-DNA-binding protein 7 [Acromyrmex echinatior]
Length = 4236
Score = 372 bits (954), Expect = e-100, Method: Composition-based stats.
Identities = 178/221 (80%), Positives = 202/221 (91%), Gaps = 4/221 (1%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ASR MLQEYE++++N+K Q IK DL KF+VLITTFEIII+D EL+ +NWRLC+IDE
Sbjct: 1829 SAASRTMLQEYEVYYKNEKGQQIK--DLVKFNVLITTFEIIITDFNELRGYNWRLCVIDE 1886
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLR L+LEHRVLLSGTPLQNNVNELFSLLNFLEPQQF++NEAF+ EF
Sbjct: 1887 AHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFASNEAFLKEF 1946
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G L +E EV+KLQLLLKPMMLRRLKEDVEKS+APKEETVVEVELTNIQKKYYRGILERNF
Sbjct: 1947 GNLSSEGEVHKLQLLLKPMMLRRLKEDVEKSLAPKEETVVEVELTNIQKKYYRGILERNF 2006
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLN--GKTYLL 513
SFL+KGTTSAN+PNLMNTMMELRKCCIH +L+N GK L+
Sbjct: 2007 SFLAKGTTSANIPNLMNTMMELRKCCIHLFLVNSSGKMVLI 2047
Score = 194 bits (493), Expect = 9e-47, Method: Composition-based stats.
Identities = 88/126 (69%), Positives = 100/126 (79%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
KPKKKP A+ WVKLE+SPVYK++N LR YQLEGLNWL+FSW+NG NCILAD
Sbjct: 1723 KPKKKPNAAAWVKLEESPVYKSNNILRPYQLEGLNWLLFSWYNGHNCILAD--------- 1773
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
EMGLGKTIQSLTFVDAV+K GIRGPFL+IAPLSTIPNWQREFE+WTD+NV
Sbjct: 1774 ----------EMGLGKTIQSLTFVDAVYKYGIRGPFLIIAPLSTIPNWQREFESWTDMNV 1823
Query: 126 IVYHAT 131
+VYH +
Sbjct: 1824 VVYHGS 1829
Score = 107 bits (266), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/82 (58%), Positives = 63/82 (76%), Gaps = 2/82 (2%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLA 251
GR KK RRDK + + +YVP++GEV+YG+W+RSECFKVERGLLTFGWGRW+E L
Sbjct: 2345 GRSKK--RRDKFGKKTRKFYDEYVPREGEVVYGSWARSECFKVERGLLTFGWGRWEEILQ 2402
Query: 252 NNEFRNGWTEEYVEELARLLDL 273
+++FR GW E VE+ AR++ L
Sbjct: 2403 HSQFRRGWREVDVEDCARVILL 2424
Score = 92.0 bits (227), Expect = 6e-16, Method: Composition-based stats.
Identities = 37/43 (86%), Positives = 42/43 (97%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FVDAV+K GIRGPFL+IAPLSTIPNWQREFE+WTD+NV+VYHG
Sbjct: 1786 FVDAVYKYGIRGPFLIIAPLSTIPNWQREFESWTDMNVVVYHG 1828
>gi|195035285|ref|XP_001989108.1| GH10228 [Drosophila grimshawi]
gi|193905108|gb|EDW03975.1| GH10228 [Drosophila grimshawi]
Length = 5820
Score = 365 bits (936), Expect = 4e-98, Method: Composition-based stats.
Identities = 165/211 (78%), Positives = 191/211 (90%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
S+ M+Q+YE +++ D + +KE KF+VLITTFE+I++D ++LK FNWRLC+IDEAHR
Sbjct: 2393 SKQMIQDYEFYYKTDSGKVLKEP--IKFNVLITTFEMIVTDYMDLKQFNWRLCVIDEAHR 2450
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGLR L LEHRVLLSGTPLQNN++ELFSLLNFLEP QFS+ E FMSEFG L
Sbjct: 2451 LKNRNCKLLEGLRQLSLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSL 2510
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+TE EVNKLQ+LLKPMMLRRLK+DVEKS+APKEET++EVELTNIQKKYYRGILE+NFSFL
Sbjct: 2511 RTEEEVNKLQVLLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFL 2570
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KGTTSAN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 2571 KKGTTSANIPNLMNTMMELRKCCIHPYLLNG 2601
Score = 177 bits (449), Expect = 1e-41, Method: Composition-based stats.
Identities = 79/127 (62%), Positives = 93/127 (73%), Gaps = 19/127 (14%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K +K+P W KLEK+P+YK+ N+LR YQLEGLNWL FSW+N
Sbjct: 2284 KSRKRPHPEQWKKLEKTPIYKSGNSLRPYQLEGLNWLKFSWYN----------------- 2326
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
+ NCILADEMGLGKTIQSLTFV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV
Sbjct: 2327 --SHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNV 2384
Query: 126 IVYHATF 132
+VYH +
Sbjct: 2385 VVYHGSL 2391
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV+VYHG
Sbjct: 2347 FVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHG 2389
Score = 79.7 bits (195), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 47/70 (67%), Gaps = 9/70 (12%)
Query: 213 DYVPKD---------GEVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEY 263
+Y+P++ E+ YGNW++SECFKVE+GLL+FGWGRW E L F+ GW +
Sbjct: 2954 EYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFGWGRWSELLELGSFKRGWRDID 3013
Query: 264 VEELARLLDL 273
VE+ AR++ L
Sbjct: 3014 VEDCARIILL 3023
>gi|195386402|ref|XP_002051893.1| GJ17250 [Drosophila virilis]
gi|194148350|gb|EDW64048.1| GJ17250 [Drosophila virilis]
Length = 5552
Score = 364 bits (935), Expect = 5e-98, Method: Composition-based stats.
Identities = 165/211 (78%), Positives = 191/211 (90%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
S+ M+Q+YE +++ D + +KE KF+VLITTFE+I++D ++LK FNWRLC+IDEAHR
Sbjct: 2296 SKQMIQDYEFYYKTDSGKVLKEP--IKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHR 2353
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGLR L LEHRVLLSGTPLQNN++ELFSLLNFLEP QFS+ E FMSEFG L
Sbjct: 2354 LKNRNCKLLEGLRQLSLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSL 2413
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+TE EVNKLQ+LLKPMMLRRLK+DVEKS+APKEET++EVELTNIQKKYYRGILE+NFSFL
Sbjct: 2414 RTEEEVNKLQVLLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFL 2473
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KGTTSAN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 2474 KKGTTSANIPNLMNTMMELRKCCIHPYLLNG 2504
Score = 177 bits (450), Expect = 8e-42, Method: Composition-based stats.
Identities = 80/126 (63%), Positives = 93/126 (73%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K +K+P W KLEK+PVYK+ N+LR YQLEGLNWL FSW+N
Sbjct: 2187 KSRKRPHPEQWKKLEKTPVYKSGNSLRPYQLEGLNWLKFSWYN----------------- 2229
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
+ NCILADEMGLGKTIQSLTFV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV
Sbjct: 2230 --SHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNV 2287
Query: 126 IVYHAT 131
+VYH +
Sbjct: 2288 VVYHGS 2293
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV+VYHG
Sbjct: 2250 FVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHG 2292
Score = 86.7 bits (213), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKD---------GEVLYGNWSRSECFKVERGLLTFG 242
G R + + ++R R K +Y+P++ E+ YGNW++SECFKVE+GLL+FG
Sbjct: 2834 GLRSRRRKEKRDRAREKKGNDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFG 2893
Query: 243 WGRWKEFLANNEFRNGWTEEYVEELARLLDL 273
WGRW E L +F+ GW + +E+ AR++ L
Sbjct: 2894 WGRWTELLELGQFKRGWRDVDIEDCARIILL 2924
>gi|170034569|ref|XP_001845146.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus]
gi|167875927|gb|EDS39310.1| chromodomain helicase DNA binding protein [Culex quinquefasciatus]
Length = 5423
Score = 363 bits (931), Expect = 2e-97, Method: Composition-based stats.
Identities = 168/214 (78%), Positives = 193/214 (90%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ SR M+Q+YE+++R + ++IK D+ KF+VLITTFE+I++D +LK +NWR C+IDE
Sbjct: 2239 SANSRQMIQDYEVYYRYENGKYIK--DINKFNVLITTFEMIVTDYQDLKPYNWRACVIDE 2296
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLR L+LEHRVLLSGTPLQNNVNELFSLLNFLEP QFS NE F+ EF
Sbjct: 2297 AHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPSQFSCNEEFLREF 2356
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTESEV KLQ LLKPMMLRRLK+DVEKS+APKEET+VEVELTNIQKKYYRGILE+NF
Sbjct: 2357 GSLKTESEVLKLQALLKPMMLRRLKDDVEKSLAPKEETIVEVELTNIQKKYYRGILEQNF 2416
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFL KGTTSAN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 2417 SFLMKGTTSANIPNLMNTMMELRKCCIHPYLLNG 2450
Score = 171 bits (433), Expect = 9e-40, Method: Composition-based stats.
Identities = 78/126 (61%), Positives = 89/126 (70%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K KK+P W L +SP+YK N+LR YQLEGLNWL +SW+ G NCILAD
Sbjct: 2133 KTKKRPHPDQWKALPQSPIYKAGNSLRPYQLEGLNWLRYSWYKGNNCILAD--------- 2183
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
EMGLGKTIQSLTFV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV
Sbjct: 2184 ----------EMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNV 2233
Query: 126 IVYHAT 131
IVYH +
Sbjct: 2234 IVYHGS 2239
Score = 88.2 bits (217), Expect = 9e-15, Method: Composition-based stats.
Identities = 36/43 (83%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NVIVYHG
Sbjct: 2196 FVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVIVYHG 2238
Score = 85.9 bits (211), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 70/123 (56%), Gaps = 17/123 (13%)
Query: 194 RKKLSRRDKERLRLKYVAADYVPKDGEVL---------YGNWSRSECFKVERGLLTFGWG 244
++ S +DK R ++ DY+P+D + L YGNW+RSECFKVE+GLL+ GW
Sbjct: 2786 KRNRSAKDKHR-KVVNEKDDYIPRDRDTLAALGFEDVSYGNWARSECFKVEKGLLSHGWA 2844
Query: 245 RWKEFLANNEFRNGWTEEYVEELARL-----LDLAGGDG--KSFSPTMSSGTDGLKSASA 297
RW E L +F+ GW E+ VE+ AR+ LD GD K+F + + ++G +
Sbjct: 2845 RWTEILELGQFKRGWREQDVEDCARVILLYCLDRYQGDEKIKNFIWDLIAPSEGGEQREI 2904
Query: 298 SRN 300
+RN
Sbjct: 2905 ARN 2907
>gi|195436658|ref|XP_002066274.1| GK18181 [Drosophila willistoni]
gi|194162359|gb|EDW77260.1| GK18181 [Drosophila willistoni]
Length = 5689
Score = 362 bits (930), Expect = 2e-97, Method: Composition-based stats.
Identities = 164/211 (77%), Positives = 190/211 (90%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
S+ M+Q+YE +++ D + +KE KF+VLITTFE+I++D ++LK FNWRLC+IDEAHR
Sbjct: 2288 SKQMIQDYEFYYKTDSGKVLKEP--IKFNVLITTFEMIVTDYMDLKTFNWRLCVIDEAHR 2345
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGLR L+LEHRVLLSGTPLQNN++ELFSLLNFLEP QF + E FMSEFG L
Sbjct: 2346 LKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFGSQEEFMSEFGSL 2405
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+TE EVNKLQ LLKPMMLRRLK+DVEKS+APKEET++EVELTNIQKKYYRGILE+NFSFL
Sbjct: 2406 RTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFL 2465
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KGTTSAN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 2466 KKGTTSANIPNLMNTMMELRKCCIHPYLLNG 2496
Score = 177 bits (449), Expect = 1e-41, Method: Composition-based stats.
Identities = 80/126 (63%), Positives = 92/126 (73%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K +K+P W KLEK+PVYK N+LR YQLEGLNWL FSW+N
Sbjct: 2179 KSRKRPHPEQWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYN----------------- 2221
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
+ NCILADEMGLGKTIQSLTFV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV
Sbjct: 2222 --SHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNV 2279
Query: 126 IVYHAT 131
+VYH +
Sbjct: 2280 VVYHGS 2285
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV+VYHG
Sbjct: 2242 FVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHG 2284
Score = 84.7 bits (208), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 10/92 (10%)
Query: 192 GRRKKLSRRDKERLRLKYVAAD-YVPKD---------GEVLYGNWSRSECFKVERGLLTF 241
G R + + ++R R K D Y+P++ E+ YGNW++SECFKVE+GLL+F
Sbjct: 2826 GLRSRRRKEKRDRAREKKANNDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSF 2885
Query: 242 GWGRWKEFLANNEFRNGWTEEYVEELARLLDL 273
GWGRW E L +F+ GW + +E+ AR++ L
Sbjct: 2886 GWGRWTELLELGQFKRGWRDIDIEDCARIILL 2917
>gi|194766405|ref|XP_001965315.1| GF24504 [Drosophila ananassae]
gi|190617925|gb|EDV33449.1| GF24504 [Drosophila ananassae]
Length = 3217
Score = 362 bits (930), Expect = 2e-97, Method: Composition-based stats.
Identities = 164/211 (77%), Positives = 191/211 (90%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
S+ M+Q+YE +++ + + +KE KF+VLITTFE+I++D ++LK FNWRLC+IDEAHR
Sbjct: 2105 SKQMIQDYEFYYKTETGKVLKEP--IKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHR 2162
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGLR L+LEHRVLLSGTPLQNN++ELFSLLNFLEP QFS+ E FMSEFG L
Sbjct: 2163 LKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSL 2222
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+TE EVNKLQ LLKPMMLRRLK+DVEKS+APKEET++EVELTNIQKKYYRGILE+NFSFL
Sbjct: 2223 RTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFL 2282
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KGTTSAN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 2283 KKGTTSANIPNLMNTMMELRKCCIHPYLLNG 2313
Score = 179 bits (455), Expect = 3e-42, Method: Composition-based stats.
Identities = 82/126 (65%), Positives = 92/126 (73%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K KK+P W KLEK+PVYK N+LR YQLEGLNWL FSW+N
Sbjct: 1996 KSKKRPHPEQWKKLEKTPVYKAGNSLRPYQLEGLNWLKFSWYN----------------- 2038
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
T NCILADEMGLGKTIQSLTFV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV
Sbjct: 2039 --THNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNV 2096
Query: 126 IVYHAT 131
+VYH +
Sbjct: 2097 VVYHGS 2102
Score = 87.4 bits (215), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV+VYHG
Sbjct: 2059 FVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHG 2101
Score = 85.9 bits (211), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/91 (40%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKD---------GEVLYGNWSRSECFKVERGLLTFG 242
G R + + ++R R K +Y+P++ E+ YGNW++SECFKVE+GLL+FG
Sbjct: 2643 GLRSRRRKEKRDRNREKKGHDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFG 2702
Query: 243 WGRWKEFLANNEFRNGWTEEYVEELARLLDL 273
WGRW E L +F+ GW + +E+ AR++ L
Sbjct: 2703 WGRWSELLELGQFKRGWRDIDIEDCARIILL 2733
>gi|357612417|gb|EHJ67986.1| hypothetical protein KGM_08436 [Danaus plexippus]
Length = 3497
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 172/215 (80%), Positives = 195/215 (90%), Gaps = 3/215 (1%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ S++M+QEYE +++N+K + IKE + KF+VLITTFEII++D ELK FNWRLC+IDE
Sbjct: 1383 SQPSKSMIQEYEFYYKNEKGEPIKE--ITKFNVLITTFEIIVTDFQELKSFNWRLCVIDE 1440
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLR LHLEHRVLLSGTPLQNNVNELFSLLNFLEP QFS++EAF++EF
Sbjct: 1441 AHRLKNRNCKLLEGLRQLHLEHRVLLSGTPLQNNVNELFSLLNFLEPSQFSSSEAFLNEF 1500
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
GQLKTESEV KLQ LLKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILERNF
Sbjct: 1501 GQLKTESEVVKLQALLKPMMLRRLKEDVEKTLAPKEETIIEVELTNIQKKYYRAILERNF 1560
Query: 475 SFLSKGTTS-ANVPNLMNTMMELRKCCIHPYLLNG 508
SFL KG S AN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 1561 SFLQKGAASAANIPNLMNTMMELRKCCIHPYLLNG 1595
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/124 (62%), Positives = 92/124 (74%), Gaps = 19/124 (15%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
KK+P A W +L+ SP+YK NTLR YQLEGLNWL+FSW N
Sbjct: 1279 KKRPCADQWCQLKDSPLYKGGNTLRPYQLEGLNWLLFSWHN------------------- 1319
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIV 127
RNCILADEMGLGKTIQSLTFV++V++ GIRGPFL+IAPLSTIPNWQREFE WT++NV+V
Sbjct: 1320 NRNCILADEMGLGKTIQSLTFVNSVWEYGIRGPFLIIAPLSTIPNWQREFEGWTEMNVVV 1379
Query: 128 YHAT 131
YH +
Sbjct: 1380 YHGS 1383
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 59/83 (71%), Gaps = 9/83 (10%)
Query: 198 SRRDKERLRLK---YVAADYVPK------DGEVLYGNWSRSECFKVERGLLTFGWGRWKE 248
S+R KE+L K Y + +YVP+ D EV+YG+W+RSECFK+ERGLLTFGW RW+E
Sbjct: 1914 SKRKKEKLGRKGRRYASDEYVPRHEGLSIDDEVVYGSWTRSECFKIERGLLTFGWARWEE 1973
Query: 249 FLANNEFRNGWTEEYVEELARLL 271
L N+FR GW+ +E+ AR++
Sbjct: 1974 ILERNQFRKGWSSPVIEDCARII 1996
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 43/49 (87%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLS 198
FV++V++ GIRGPFL+IAPLSTIPNWQREFE WT++NV+VYHG + S
Sbjct: 1340 FVNSVWEYGIRGPFLIIAPLSTIPNWQREFEGWTEMNVVVYHGSQPSKS 1388
>gi|194853302|ref|XP_001968138.1| GG24671 [Drosophila erecta]
gi|190660005|gb|EDV57197.1| GG24671 [Drosophila erecta]
Length = 5335
Score = 361 bits (927), Expect = 4e-97, Method: Composition-based stats.
Identities = 164/211 (77%), Positives = 191/211 (90%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
S+ M+Q+YE +++ + + +KE KF+VLITTFE+I++D ++LK FNWRLC+IDEAHR
Sbjct: 2121 SKQMIQDYEYYYKTESGKVLKEP--IKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHR 2178
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGLR L+LEHRVLLSGTPLQNN++ELFSLLNFLEP QFS+ E FMSEFG L
Sbjct: 2179 LKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSL 2238
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+TE EVNKLQ LLKPMMLRRLK+DVEKS+APKEET++EVELTNIQKKYYRGILE+NFSFL
Sbjct: 2239 RTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFL 2298
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KGTTSAN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 2299 KKGTTSANIPNLMNTMMELRKCCIHPYLLNG 2329
Score = 178 bits (451), Expect = 6e-42, Method: Composition-based stats.
Identities = 82/126 (65%), Positives = 92/126 (73%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K KK+P W KLEK+PVYK N+LR YQLEGLNWL FSW+N
Sbjct: 2012 KSKKRPHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYN----------------- 2054
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
T NCILADEMGLGKTIQSLTFV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV
Sbjct: 2055 --THNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNV 2112
Query: 126 IVYHAT 131
+VYH +
Sbjct: 2113 VVYHGS 2118
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV+VYHG
Sbjct: 2075 FVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHG 2117
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKD---------GEVLYGNWSRSECFKVERGLLTFG 242
G R + + ++R R K +Y+P++ E+ YGNW++SECFKVE+GLL+FG
Sbjct: 2659 GLRSRRRKEKRDRAREKKGNDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFG 2718
Query: 243 WGRWKEFLANNEFRNGWTEEYVEELARLLDL 273
WGRW E L +F+ GW + VE+ AR++ L
Sbjct: 2719 WGRWSELLELGQFKRGWRDVDVEDCARIILL 2749
>gi|221330583|ref|NP_001137761.1| kismet, isoform C [Drosophila melanogaster]
gi|220901895|gb|ACL82968.1| kismet, isoform C [Drosophila melanogaster]
Length = 5517
Score = 361 bits (927), Expect = 4e-97, Method: Composition-based stats.
Identities = 164/211 (77%), Positives = 191/211 (90%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
S+ M+Q+YE +++ + + +KE KF+VLITTFE+I++D ++LK FNWRLC+IDEAHR
Sbjct: 2113 SKQMIQDYEYYYKTESGKVLKEP--IKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHR 2170
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGLR L+LEHRVLLSGTPLQNN++ELFSLLNFLEP QFS+ E FMSEFG L
Sbjct: 2171 LKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSL 2230
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+TE EVNKLQ LLKPMMLRRLK+DVEKS+APKEET++EVELTNIQKKYYRGILE+NFSFL
Sbjct: 2231 RTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFL 2290
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KGTTSAN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 2291 KKGTTSANIPNLMNTMMELRKCCIHPYLLNG 2321
Score = 178 bits (451), Expect = 7e-42, Method: Composition-based stats.
Identities = 82/126 (65%), Positives = 92/126 (73%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K KK+P W KLEK+PVYK N+LR YQLEGLNWL FSW+N
Sbjct: 2004 KSKKRPHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYN----------------- 2046
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
T NCILADEMGLGKTIQSLTFV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV
Sbjct: 2047 --THNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNV 2104
Query: 126 IVYHAT 131
+VYH +
Sbjct: 2105 VVYHGS 2110
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV+VYHG
Sbjct: 2067 FVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHG 2109
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKD---------GEVLYGNWSRSECFKVERGLLTFG 242
G R + + ++R R K +Y+P++ E+ YGNW++SECFKVE+GLL+FG
Sbjct: 2651 GLRSRRRKEKRDRAREKKGNDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFG 2710
Query: 243 WGRWKEFLANNEFRNGWTEEYVEELARLLDL 273
WGRW E L +F+ GW + VE+ AR++ L
Sbjct: 2711 WGRWSELLELGQFKRGWRDVDVEDCARIILL 2741
>gi|157127434|ref|XP_001654978.1| chromodomain helicase DNA binding protein [Aedes aegypti]
gi|108882413|gb|EAT46638.1| AAEL002230-PA, partial [Aedes aegypti]
Length = 4467
Score = 361 bits (927), Expect = 4e-97, Method: Composition-based stats.
Identities = 168/214 (78%), Positives = 195/214 (91%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ SR M+Q+YE+F+R + ++IK D+ KF+VLITTFE+I++D +LK FN+R+C+IDE
Sbjct: 2011 SATSRQMIQDYEVFYRYENGKYIK--DINKFNVLITTFEMIVTDYQDLKPFNFRVCVIDE 2068
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLR L+LEHRVLLSGTPLQNNVNELFSLLNFLEP QFS+N+ F+ EF
Sbjct: 2069 AHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPSQFSSNDEFLREF 2128
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTESEV KLQ LLKPMMLRRLK+DVEKS+APKEET+VEVELTNIQKKYYRGILE+NF
Sbjct: 2129 GSLKTESEVLKLQALLKPMMLRRLKDDVEKSLAPKEETIVEVELTNIQKKYYRGILEQNF 2188
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFL KGTTSAN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 2189 SFLMKGTTSANIPNLMNTMMELRKCCIHPYLLNG 2222
Score = 169 bits (429), Expect = 2e-39, Method: Composition-based stats.
Identities = 83/141 (58%), Positives = 94/141 (66%), Gaps = 21/141 (14%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K KK+P W L +SP YK N LR YQLEGLNWL +SW+ G NCILAD
Sbjct: 1905 KTKKRPHPDQWKALPESPTYKAGNRLRPYQLEGLNWLRYSWYKGNNCILAD--------- 1955
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
EMGLGKTIQSLTFV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV
Sbjct: 1956 ----------EMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNV 2005
Query: 126 IVYH--ATFVVLLQTGSKFFR 144
IVYH AT ++Q F+R
Sbjct: 2006 IVYHGSATSRQMIQDYEVFYR 2026
Score = 87.8 bits (216), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/43 (83%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NVIVYHG
Sbjct: 1968 FVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVIVYHG 2010
Score = 81.6 bits (200), Expect = 9e-13, Method: Composition-based stats.
Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 17/118 (14%)
Query: 200 RDKERLRLKYVAAD-YVPKD---------GEVLYGNWSRSECFKVERGLLTFGWGRWKEF 249
R K++ + + V D Y+P+D EV YGNW+RSE FKVE+GLL+ GW RW E
Sbjct: 2562 RGKDKNKKQQVEKDEYIPRDRDTLAALGFDEVSYGNWARSELFKVEKGLLSHGWARWTEI 2621
Query: 250 LANNEFRNGWTEEYVEELARL-----LDLAGGDG--KSFSPTMSSGTDGLKSASASRN 300
L +F+ GW E+ +EE +R+ LD GD K+F + + ++G + +RN
Sbjct: 2622 LEQGQFKRGWREQDIEECSRIILLYCLDRYQGDEKIKNFIWELITPSEGGEQREIARN 2679
>gi|195470194|ref|XP_002087393.1| GE16349 [Drosophila yakuba]
gi|194173494|gb|EDW87105.1| GE16349 [Drosophila yakuba]
Length = 5330
Score = 361 bits (927), Expect = 5e-97, Method: Composition-based stats.
Identities = 164/211 (77%), Positives = 191/211 (90%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
S+ M+Q+YE +++ + + +KE KF+VLITTFE+I++D ++LK FNWRLC+IDEAHR
Sbjct: 2114 SKQMIQDYEYYYKTESGKVLKEP--IKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHR 2171
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGLR L+LEHRVLLSGTPLQNN++ELFSLLNFLEP QFS+ E FMSEFG L
Sbjct: 2172 LKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSL 2231
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+TE EVNKLQ LLKPMMLRRLK+DVEKS+APKEET++EVELTNIQKKYYRGILE+NFSFL
Sbjct: 2232 RTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFL 2291
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KGTTSAN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 2292 KKGTTSANIPNLMNTMMELRKCCIHPYLLNG 2322
Score = 178 bits (451), Expect = 7e-42, Method: Composition-based stats.
Identities = 82/126 (65%), Positives = 92/126 (73%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K KK+P W KLEK+PVYK N+LR YQLEGLNWL FSW+N
Sbjct: 2005 KSKKRPHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYN----------------- 2047
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
T NCILADEMGLGKTIQSLTFV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV
Sbjct: 2048 --THNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNV 2105
Query: 126 IVYHAT 131
+VYH +
Sbjct: 2106 VVYHGS 2111
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV+VYHG
Sbjct: 2068 FVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHG 2110
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKD---------GEVLYGNWSRSECFKVERGLLTFG 242
G R + + ++R R K +Y+P++ E+ YGNW++SECFKVE+GLL+FG
Sbjct: 2652 GLRSRRRKEKRDRAREKKGNDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFG 2711
Query: 243 WGRWKEFLANNEFRNGWTEEYVEELARLLDL 273
WGRW E L +F+ GW + VE+ AR++ L
Sbjct: 2712 WGRWSELLELGQFKRGWRDVDVEDCARIILL 2742
>gi|17986031|ref|NP_523441.1| kismet, isoform A [Drosophila melanogaster]
gi|7230509|gb|AAF43004.1|AF215703_1 KISMET-L long isoform [Drosophila melanogaster]
gi|22945599|gb|AAF51527.3| kismet, isoform A [Drosophila melanogaster]
Length = 5322
Score = 361 bits (926), Expect = 5e-97, Method: Composition-based stats.
Identities = 164/211 (77%), Positives = 191/211 (90%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
S+ M+Q+YE +++ + + +KE KF+VLITTFE+I++D ++LK FNWRLC+IDEAHR
Sbjct: 2113 SKQMIQDYEYYYKTESGKVLKEP--IKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHR 2170
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGLR L+LEHRVLLSGTPLQNN++ELFSLLNFLEP QFS+ E FMSEFG L
Sbjct: 2171 LKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSL 2230
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+TE EVNKLQ LLKPMMLRRLK+DVEKS+APKEET++EVELTNIQKKYYRGILE+NFSFL
Sbjct: 2231 RTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFL 2290
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KGTTSAN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 2291 KKGTTSANIPNLMNTMMELRKCCIHPYLLNG 2321
Score = 178 bits (451), Expect = 8e-42, Method: Composition-based stats.
Identities = 82/126 (65%), Positives = 92/126 (73%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K KK+P W KLEK+PVYK N+LR YQLEGLNWL FSW+N
Sbjct: 2004 KSKKRPHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYN----------------- 2046
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
T NCILADEMGLGKTIQSLTFV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV
Sbjct: 2047 --THNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNV 2104
Query: 126 IVYHAT 131
+VYH +
Sbjct: 2105 VVYHGS 2110
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV+VYHG
Sbjct: 2067 FVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHG 2109
Score = 87.0 bits (214), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKD---------GEVLYGNWSRSECFKVERGLLTFG 242
G R + + ++R R K +Y+P++ E+ YGNW++SECFKVE+GLL+FG
Sbjct: 2651 GLRSRRRKEKRDRAREKKGNDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFG 2710
Query: 243 WGRWKEFLANNEFRNGWTEEYVEELARLLDL 273
WGRW E L +F+ GW + VE+ AR++ L
Sbjct: 2711 WGRWSELLELGQFKRGWRDVDVEDCARIILL 2741
>gi|198476743|ref|XP_001357465.2| GA17619 [Drosophila pseudoobscura pseudoobscura]
gi|198137832|gb|EAL34535.2| GA17619 [Drosophila pseudoobscura pseudoobscura]
Length = 5605
Score = 361 bits (926), Expect = 6e-97, Method: Composition-based stats.
Identities = 163/211 (77%), Positives = 190/211 (90%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
S+ M+Q+YE +++ D + +KE KF+VLITTFE+I++D ++LK FNWRLC+IDEAHR
Sbjct: 2222 SKQMIQDYEFYYKTDSGKVLKEP--IKFNVLITTFEMIVTDYMDLKQFNWRLCVIDEAHR 2279
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGLR L+LEHRVLLSGTPLQNN++ELFSLLNFLEP QFS+ E FM+EFG L
Sbjct: 2280 LKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPAQFSSQEEFMTEFGNL 2339
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E EVNKLQ LLKPMMLRRLK+DVEKS+APKEET++EVELTNIQKKYYRGILE+NFSFL
Sbjct: 2340 RNEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFL 2399
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KGTTSAN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 2400 KKGTTSANIPNLMNTMMELRKCCIHPYLLNG 2430
Score = 182 bits (462), Expect = 4e-43, Method: Composition-based stats.
Identities = 81/126 (64%), Positives = 93/126 (73%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K +K+PP W KLEK+P+YK N+LR YQLEGLNWL FSWFN
Sbjct: 2113 KSRKRPPPEQWKKLEKTPIYKGGNSLRPYQLEGLNWLKFSWFN----------------- 2155
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
T NCILADEMGLGKTIQSLTFV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+N+
Sbjct: 2156 --THNCILADEMGLGKTIQSLTFVHSVYEFGIRGPFLVIAPLSTIPNWQREFEGWTDMNI 2213
Query: 126 IVYHAT 131
+VYH +
Sbjct: 2214 VVYHGS 2219
Score = 86.7 bits (213), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/43 (79%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+N++VYHG
Sbjct: 2176 FVHSVYEFGIRGPFLVIAPLSTIPNWQREFEGWTDMNIVVYHG 2218
Score = 85.9 bits (211), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 9/89 (10%)
Query: 194 RKKLSRRDKERLRLKYVAADYVPKD---------GEVLYGNWSRSECFKVERGLLTFGWG 244
R++ +RD+ R + + +Y+P++ E+ YGNW++SECFKVE+GLL+FGWG
Sbjct: 2764 RRRKEKRDRGRDKREKGHEEYLPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFGWG 2823
Query: 245 RWKEFLANNEFRNGWTEEYVEELARLLDL 273
RW E L +F+ GW + VE+ AR++ L
Sbjct: 2824 RWSELLELGQFKRGWRDIDVEDCARIILL 2852
>gi|386768875|ref|NP_001245818.1| kismet, isoform D [Drosophila melanogaster]
gi|383291254|gb|AFH03495.1| kismet, isoform D [Drosophila melanogaster]
Length = 5343
Score = 360 bits (925), Expect = 7e-97, Method: Composition-based stats.
Identities = 164/211 (77%), Positives = 191/211 (90%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
S+ M+Q+YE +++ + + +KE KF+VLITTFE+I++D ++LK FNWRLC+IDEAHR
Sbjct: 2113 SKQMIQDYEYYYKTESGKVLKEP--IKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHR 2170
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGLR L+LEHRVLLSGTPLQNN++ELFSLLNFLEP QFS+ E FMSEFG L
Sbjct: 2171 LKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSL 2230
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+TE EVNKLQ LLKPMMLRRLK+DVEKS+APKEET++EVELTNIQKKYYRGILE+NFSFL
Sbjct: 2231 RTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFL 2290
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KGTTSAN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 2291 KKGTTSANIPNLMNTMMELRKCCIHPYLLNG 2321
Score = 177 bits (450), Expect = 8e-42, Method: Composition-based stats.
Identities = 82/126 (65%), Positives = 92/126 (73%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K KK+P W KLEK+PVYK N+LR YQLEGLNWL FSW+N
Sbjct: 2004 KSKKRPHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYN----------------- 2046
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
T NCILADEMGLGKTIQSLTFV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV
Sbjct: 2047 --THNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNV 2104
Query: 126 IVYHAT 131
+VYH +
Sbjct: 2105 VVYHGS 2110
Score = 87.0 bits (214), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV+VYHG
Sbjct: 2067 FVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHG 2109
Score = 87.0 bits (214), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKD---------GEVLYGNWSRSECFKVERGLLTFG 242
G R + + ++R R K +Y+P++ E+ YGNW++SECFKVE+GLL+FG
Sbjct: 2651 GLRSRRRKEKRDRAREKKGNDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFG 2710
Query: 243 WGRWKEFLANNEFRNGWTEEYVEELARLLDL 273
WGRW E L +F+ GW + VE+ AR++ L
Sbjct: 2711 WGRWSELLELGQFKRGWRDVDVEDCARIILL 2741
>gi|386768879|ref|NP_001245820.1| kismet, isoform F [Drosophila melanogaster]
gi|383291256|gb|AFH03497.1| kismet, isoform F [Drosophila melanogaster]
Length = 5191
Score = 360 bits (925), Expect = 7e-97, Method: Composition-based stats.
Identities = 164/211 (77%), Positives = 191/211 (90%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
S+ M+Q+YE +++ + + +KE KF+VLITTFE+I++D ++LK FNWRLC+IDEAHR
Sbjct: 2113 SKQMIQDYEYYYKTESGKVLKEP--IKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHR 2170
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGLR L+LEHRVLLSGTPLQNN++ELFSLLNFLEP QFS+ E FMSEFG L
Sbjct: 2171 LKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSL 2230
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+TE EVNKLQ LLKPMMLRRLK+DVEKS+APKEET++EVELTNIQKKYYRGILE+NFSFL
Sbjct: 2231 RTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFL 2290
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KGTTSAN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 2291 KKGTTSANIPNLMNTMMELRKCCIHPYLLNG 2321
Score = 177 bits (450), Expect = 8e-42, Method: Composition-based stats.
Identities = 82/126 (65%), Positives = 92/126 (73%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K KK+P W KLEK+PVYK N+LR YQLEGLNWL FSW+N
Sbjct: 2004 KSKKRPHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYN----------------- 2046
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
T NCILADEMGLGKTIQSLTFV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV
Sbjct: 2047 --THNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNV 2104
Query: 126 IVYHAT 131
+VYH +
Sbjct: 2105 VVYHGS 2110
Score = 87.0 bits (214), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV+VYHG
Sbjct: 2067 FVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHG 2109
Score = 87.0 bits (214), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKD---------GEVLYGNWSRSECFKVERGLLTFG 242
G R + + ++R R K +Y+P++ E+ YGNW++SECFKVE+GLL+FG
Sbjct: 2651 GLRSRRRKEKRDRAREKKGNDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFG 2710
Query: 243 WGRWKEFLANNEFRNGWTEEYVEELARLLDL 273
WGRW E L +F+ GW + VE+ AR++ L
Sbjct: 2711 WGRWSELLELGQFKRGWRDVDVEDCARIILL 2741
>gi|386768877|ref|NP_001245819.1| kismet, isoform E [Drosophila melanogaster]
gi|383291255|gb|AFH03496.1| kismet, isoform E [Drosophila melanogaster]
Length = 5252
Score = 360 bits (925), Expect = 7e-97, Method: Composition-based stats.
Identities = 164/211 (77%), Positives = 191/211 (90%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
S+ M+Q+YE +++ + + +KE KF+VLITTFE+I++D ++LK FNWRLC+IDEAHR
Sbjct: 2113 SKQMIQDYEYYYKTESGKVLKEP--IKFNVLITTFEMIVTDYMDLKAFNWRLCVIDEAHR 2170
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGLR L+LEHRVLLSGTPLQNN++ELFSLLNFLEP QFS+ E FMSEFG L
Sbjct: 2171 LKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISELFSLLNFLEPSQFSSQEEFMSEFGSL 2230
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+TE EVNKLQ LLKPMMLRRLK+DVEKS+APKEET++EVELTNIQKKYYRGILE+NFSFL
Sbjct: 2231 RTEEEVNKLQALLKPMMLRRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNFSFL 2290
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KGTTSAN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 2291 KKGTTSANIPNLMNTMMELRKCCIHPYLLNG 2321
Score = 177 bits (450), Expect = 8e-42, Method: Composition-based stats.
Identities = 82/126 (65%), Positives = 92/126 (73%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K KK+P W KLEK+PVYK N+LR YQLEGLNWL FSW+N
Sbjct: 2004 KSKKRPHPELWKKLEKTPVYKGGNSLRPYQLEGLNWLKFSWYN----------------- 2046
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
T NCILADEMGLGKTIQSLTFV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV
Sbjct: 2047 --THNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNV 2104
Query: 126 IVYHAT 131
+VYH +
Sbjct: 2105 VVYHGS 2110
Score = 87.0 bits (214), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV +V++ GIRGPFLVIAPLSTIPNWQREFE WTD+NV+VYHG
Sbjct: 2067 FVHSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTDMNVVVYHG 2109
Score = 87.0 bits (214), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 57/91 (62%), Gaps = 9/91 (9%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKD---------GEVLYGNWSRSECFKVERGLLTFG 242
G R + + ++R R K +Y+P++ E+ YGNW++SECFKVE+GLL+FG
Sbjct: 2651 GLRSRRRKEKRDRAREKKGNDEYIPRERDALAALGLEEIQYGNWAKSECFKVEKGLLSFG 2710
Query: 243 WGRWKEFLANNEFRNGWTEEYVEELARLLDL 273
WGRW E L +F+ GW + VE+ AR++ L
Sbjct: 2711 WGRWSELLELGQFKRGWRDVDVEDCARIILL 2741
>gi|312385188|gb|EFR29745.1| hypothetical protein AND_01060 [Anopheles darlingi]
Length = 5373
Score = 360 bits (923), Expect = 1e-96, Method: Composition-based stats.
Identities = 166/214 (77%), Positives = 192/214 (89%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ SR M+Q+YE+++R + + I+ D+ KF+VLITTFE+I++D +LK+F WR C+IDE
Sbjct: 1348 SATSRQMIQDYEVYYRTETGKLIR--DITKFNVLITTFEMIVTDYQDLKNFTWRACVIDE 1405
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLR L+LEHRVLLSGTPLQNNVNELFSLLNFLEP QFS +E F+ EF
Sbjct: 1406 AHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPSQFSCSEDFLREF 1465
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTESEV KLQ LLKPMMLRRLK+DVEKS+APKEET+VEVELTNIQKKYYRGILE+NF
Sbjct: 1466 GSLKTESEVLKLQALLKPMMLRRLKDDVEKSLAPKEETIVEVELTNIQKKYYRGILEQNF 1525
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFL KGTTSAN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 1526 SFLMKGTTSANIPNLMNTMMELRKCCIHPYLLNG 1559
Score = 169 bits (427), Expect = 4e-39, Method: Composition-based stats.
Identities = 80/141 (56%), Positives = 96/141 (68%), Gaps = 21/141 (14%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K KK+P W L +SP++K N LR YQLEGLNWL +SW+ G NCILAD
Sbjct: 1242 KTKKRPHPDQWKALTESPIFKGGNKLRPYQLEGLNWLRYSWYKGNNCILAD--------- 1292
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
EMGLGKTIQSLTFV++V++ GIRGPFLVIAPLSTIPNWQREFE WT++NV
Sbjct: 1293 ----------EMGLGKTIQSLTFVNSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTEMNV 1342
Query: 126 IVYH--ATFVVLLQTGSKFFR 144
IVYH AT ++Q ++R
Sbjct: 1343 IVYHGSATSRQMIQDYEVYYR 1363
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/43 (81%), Positives = 41/43 (95%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV++V++ GIRGPFLVIAPLSTIPNWQREFE WT++NVIVYHG
Sbjct: 1305 FVNSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTEMNVIVYHG 1347
>gi|321468122|gb|EFX79109.1| hypothetical protein DAPPUDRAFT_319863 [Daphnia pulex]
Length = 4355
Score = 360 bits (923), Expect = 1e-96, Method: Composition-based stats.
Identities = 164/214 (76%), Positives = 193/214 (90%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ SR MLQEYE +++ K IKE +YKF+VLITTFE+IISDC+EL++ WRLC+IDE
Sbjct: 1782 SNPSRTMLQEYEFHYKDSKGNQIKE--MYKFNVLITTFEMIISDCMELREVPWRLCVIDE 1839
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN+NCKLLEGLRLL +EHRVLLSGTPLQNN++EL+SLLNFLEP QF+++E F +F
Sbjct: 1840 AHRLKNKNCKLLEGLRLLQMEHRVLLSGTPLQNNISELYSLLNFLEPAQFASSEDFTRDF 1899
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LK++ +V KLQ LLKPMMLRRLKEDVEKS+APKEET+VEVELTN+QKKYYRGILERNF
Sbjct: 1900 GDLKSDDQVQKLQALLKPMMLRRLKEDVEKSLAPKEETIVEVELTNMQKKYYRGILERNF 1959
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFL+KGTT+ANVPNLMNTMMELRKCCIHPYLLNG
Sbjct: 1960 SFLTKGTTNANVPNLMNTMMELRKCCIHPYLLNG 1993
Score = 181 bits (459), Expect = 8e-43, Method: Composition-based stats.
Identities = 84/129 (65%), Positives = 95/129 (73%), Gaps = 19/129 (14%)
Query: 3 LIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+ K +KKP S+W KL++SPVY N NTLR YQLEGLNWL FSWFNGRNCILA
Sbjct: 1673 MFGKGRKKPRPSEWKKLDESPVYLNGNTLREYQLEGLNWLSFSWFNGRNCILA------- 1725
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD 122
DEMGLGKTIQSL FV++V + GIRGPFLVIAPLSTIPNWQREFE WT+
Sbjct: 1726 ------------DEMGLGKTIQSLAFVESVHRLGIRGPFLVIAPLSTIPNWQREFETWTN 1773
Query: 123 LNVIVYHAT 131
LN+IVYH +
Sbjct: 1774 LNIIVYHGS 1782
Score = 87.8 bits (216), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/55 (60%), Positives = 45/55 (81%)
Query: 217 KDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
KD EV YG W+++ECFKVE+GL+TFGWGRW+E +A+ +FR GW E VE+ AR++
Sbjct: 2342 KDREVEYGAWTKTECFKVEKGLMTFGWGRWREIMAHGQFRKGWRESDVEDCARMM 2396
Score = 86.3 bits (212), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/43 (81%), Positives = 40/43 (93%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV++V + GIRGPFLVIAPLSTIPNWQREFE WT+LN+IVYHG
Sbjct: 1739 FVESVHRLGIRGPFLVIAPLSTIPNWQREFETWTNLNIIVYHG 1781
>gi|158296578|ref|XP_316961.4| AGAP008482-PA [Anopheles gambiae str. PEST]
gi|157014777|gb|EAA12280.5| AGAP008482-PA [Anopheles gambiae str. PEST]
Length = 4793
Score = 357 bits (916), Expect = 8e-96, Method: Composition-based stats.
Identities = 165/214 (77%), Positives = 191/214 (89%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ SR M+Q+YE+ +R + + I+ D+ KF+VLITTFE+I++D +LK+F WR C+IDE
Sbjct: 1935 SATSRQMIQDYEVHYRTETGKLIR--DITKFNVLITTFEMIVTDYQDLKNFTWRACVIDE 1992
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLR L+LEHRVLLSGTPLQNNVNELFSLLNFLEP QF+ +E F+ EF
Sbjct: 1993 AHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNVNELFSLLNFLEPSQFACSEEFLREF 2052
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTESEV KLQ LLKPMMLRRLK+DVEKS+APKEET+VEVELTNIQKKYYRGILE+NF
Sbjct: 2053 GSLKTESEVLKLQALLKPMMLRRLKDDVEKSLAPKEETIVEVELTNIQKKYYRGILEQNF 2112
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFL KGTTSAN+PNLMNTMMELRKCCIHPYLLNG
Sbjct: 2113 SFLMKGTTSANIPNLMNTMMELRKCCIHPYLLNG 2146
Score = 167 bits (422), Expect = 2e-38, Method: Composition-based stats.
Identities = 76/126 (60%), Positives = 88/126 (69%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K KK+P W L +SP +K N LR YQLEGLNWL +SW+ G NCILAD
Sbjct: 1829 KTKKRPHPDQWKALPESPTFKGGNKLRPYQLEGLNWLRYSWYKGNNCILAD--------- 1879
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
EMGLGKTIQSLTFV++V++ GIRGPFLVIAPLSTIPNWQREFE WT++NV
Sbjct: 1880 ----------EMGLGKTIQSLTFVNSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTEMNV 1929
Query: 126 IVYHAT 131
IVYH +
Sbjct: 1930 IVYHGS 1935
Score = 92.8 bits (229), Expect = 4e-16, Method: Composition-based stats.
Identities = 58/149 (38%), Positives = 80/149 (53%), Gaps = 20/149 (13%)
Query: 194 RKKLSRRDKERLRLKYVAA--DYVPKDGEVL---------YGNWSRSECFKVERGLLTFG 242
R K +R KER +L+ DYVP+D E L YGNW+RSECFKVE+GLL+ G
Sbjct: 2481 RSKRTRGAKERKKLQQQMQHDDYVPRDRETLAVLGADEVSYGNWARSECFKVEKGLLSHG 2540
Query: 243 WGRWKEFLANNEFRNGWTEEYVEELARL-----LDLAGGDG--KSFSPTMSSGTDGLKSA 295
W RW E L +F+ GW E+ VE+ AR+ L+ GD K+F + + +G +
Sbjct: 2541 WARWTEILEQGQFKRGWREQDVEDCARVILLYCLERYQGDEKIKNFIWDLITPNEGGEQR 2600
Query: 296 SASRNMLQEYELF--FRNDKNQFIKEKDL 322
+RN + L RN K +EK+L
Sbjct: 2601 EIARNHSGLHNLVPRGRNAKGNAEREKEL 2629
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/43 (81%), Positives = 41/43 (95%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV++V++ GIRGPFLVIAPLSTIPNWQREFE WT++NVIVYHG
Sbjct: 1892 FVNSVYEYGIRGPFLVIAPLSTIPNWQREFEGWTEMNVIVYHG 1934
>gi|427792891|gb|JAA61897.1| Putative chromatin remodeling complex swi/snf component swi2, partial
[Rhipicephalus pulchellus]
Length = 4185
Score = 355 bits (912), Expect = 2e-95, Method: Composition-based stats.
Identities = 160/214 (74%), Positives = 188/214 (87%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+SASRNM+QEYE++++++ Q I D+YKF V+ITTFEI++SDC+EL+ WR C+IDE
Sbjct: 1634 SSASRNMIQEYEMYYKDENGQRIT--DVYKFQVMITTFEIVLSDCMELQALPWRACVIDE 1691
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLR+L+LEH VLL+GTPLQNNV ELFSLLNFLEP +FS+ E FM EF
Sbjct: 1692 AHRLKNRNCKLLEGLRMLNLEHSVLLTGTPLQNNVEELFSLLNFLEPSRFSSTETFMEEF 1751
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V+KL+ LLKPMMLRRLKEDVEKS+APKEET+VEVELTNIQKKYYR ILERNF
Sbjct: 1752 GDLKTEGQVDKLKALLKPMMLRRLKEDVEKSLAPKEETIVEVELTNIQKKYYRAILERNF 1811
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FL+KG NVPNLMNTMMELRKCCIHPYL+ G
Sbjct: 1812 AFLTKGGVGTNVPNLMNTMMELRKCCIHPYLIKG 1845
Score = 166 bits (419), Expect = 3e-38, Method: Composition-based stats.
Identities = 75/126 (59%), Positives = 90/126 (71%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K KK+P S+W ++++SPVYK NTLR YQLEGL+WL F W+NG+NCILA
Sbjct: 1528 KVKKRPKPSEWKQIDESPVYKGGNTLREYQLEGLSWLTFCWYNGQNCILA---------- 1577
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
DEMGLGKTIQSLTF++ + + GI GPFLVIAPLSTI NWQREFE WT+LNV
Sbjct: 1578 ---------DEMGLGKTIQSLTFINEIVRYGINGPFLVIAPLSTIGNWQREFETWTELNV 1628
Query: 126 IVYHAT 131
I YH +
Sbjct: 1629 ITYHGS 1634
Score = 77.0 bits (188), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F++ + + GI GPFLVIAPLSTI NWQREFE WT+LNVI YHG
Sbjct: 1591 FINEIVRYGINGPFLVIAPLSTIGNWQREFETWTELNVITYHG 1633
Score = 66.6 bits (161), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 42/55 (76%)
Query: 219 GEVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLLDL 273
G++ GNW+R+ECF+VE+GLLTFGWGRW+E +A +R + VE+++R++ L
Sbjct: 2209 GDIAPGNWTRTECFQVEKGLLTFGWGRWEESIAIGLWRRRVMPKDVEDISRVVLL 2263
>gi|427795099|gb|JAA63001.1| Putative chromatin remodeling complex swi/snf component swi2, partial
[Rhipicephalus pulchellus]
Length = 2086
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 160/214 (74%), Positives = 188/214 (87%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+SASRNM+QEYE++++++ Q I D+YKF V+ITTFEI++SDC+EL+ WR C+IDE
Sbjct: 1274 SSASRNMIQEYEMYYKDENGQRIT--DVYKFQVMITTFEIVLSDCMELQALPWRACVIDE 1331
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGLR+L+LEH VLL+GTPLQNNV ELFSLLNFLEP +FS+ E FM EF
Sbjct: 1332 AHRLKNRNCKLLEGLRMLNLEHSVLLTGTPLQNNVEELFSLLNFLEPSRFSSTETFMEEF 1391
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V+KL+ LLKPMMLRRLKEDVEKS+APKEET+VEVELTNIQKKYYR ILERNF
Sbjct: 1392 GDLKTEGQVDKLKALLKPMMLRRLKEDVEKSLAPKEETIVEVELTNIQKKYYRAILERNF 1451
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FL+KG NVPNLMNTMMELRKCCIHPYL+ G
Sbjct: 1452 AFLTKGGVGTNVPNLMNTMMELRKCCIHPYLIKG 1485
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/124 (59%), Positives = 89/124 (71%), Gaps = 19/124 (15%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
KK+P S+W ++++SPVYK NTLR YQLEGL+WL F W+NG+NCILA
Sbjct: 1170 KKRPKPSEWKQIDESPVYKGGNTLREYQLEGLSWLTFCWYNGQNCILA------------ 1217
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIV 127
DEMGLGKTIQSLTF++ + + GI GPFLVIAPLSTI NWQREFE WT+LNVI
Sbjct: 1218 -------DEMGLGKTIQSLTFINEIVRYGINGPFLVIAPLSTIGNWQREFETWTELNVIT 1270
Query: 128 YHAT 131
YH +
Sbjct: 1271 YHGS 1274
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F++ + + GI GPFLVIAPLSTI NWQREFE WT+LNVI YHG
Sbjct: 1231 FINEIVRYGINGPFLVIAPLSTIGNWQREFETWTELNVITYHG 1273
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 41/53 (77%)
Query: 219 GEVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G++ GNW+R+ECF+VE+GLLTFGWGRW+E +A +R + VE+++R++
Sbjct: 1842 GDIAPGNWTRTECFQVEKGLLTFGWGRWEESIAIGLWRRRVMPKDVEDISRVV 1894
>gi|391339772|ref|XP_003744221.1| PREDICTED: uncharacterized protein LOC100904905 [Metaseiulus
occidentalis]
Length = 4725
Score = 329 bits (843), Expect = 2e-87, Method: Composition-based stats.
Identities = 151/214 (70%), Positives = 185/214 (86%), Gaps = 4/214 (1%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+SASRNM+QEYE+F+++++ + I E + KF VLITTFE+I+SDC EL + WR CIIDE
Sbjct: 1902 SSASRNMIQEYEMFYKDEEGKRITE--VQKFQVLITTFEVILSDCQELSNLPWRACIIDE 1959
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKL+EGLR+L +H VLLSGTPLQN+V ELFSLLNFLEP +F + E F++EF
Sbjct: 1960 AHRLKNRNCKLIEGLRVLKFDHIVLLSGTPLQNSVEELFSLLNFLEPDRFHSPEEFLAEF 2019
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V+KL+ +LKPMMLRRLKEDVEKS+APKEET++EVELTN+QKKYYR ILE+NF
Sbjct: 2020 GDLKTEGQVDKLKAVLKPMMLRRLKEDVEKSLAPKEETIIEVELTNVQKKYYRAILEKNF 2079
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FL KG+ S VP+LMNTMMELRKCCIHPYL+ G
Sbjct: 2080 TFLCKGSQS--VPSLMNTMMELRKCCIHPYLIAG 2111
Score = 159 bits (403), Expect = 3e-36, Method: Composition-based stats.
Identities = 71/126 (56%), Positives = 90/126 (71%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K KK+P ++W ++++S VY+N NTLR YQLEG++WL F W+N
Sbjct: 1796 KIKKRPKPNEWRQIDESAVYRNGNTLREYQLEGVSWLTFCWYN----------------- 1838
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
+NCILADEMGLGKTIQSL+FV+ + K GIRGPF++IAPLSTI NWQREFE WT+LNV
Sbjct: 1839 --HQNCILADEMGLGKTIQSLSFVNEIVKYGIRGPFMIIAPLSTIGNWQREFETWTELNV 1896
Query: 126 IVYHAT 131
I YH +
Sbjct: 1897 ITYHGS 1902
Score = 79.7 bits (195), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/43 (74%), Positives = 37/43 (86%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV+ + K GIRGPF++IAPLSTI NWQREFE WT+LNVI YHG
Sbjct: 1859 FVNEIVKYGIRGPFMIIAPLSTIGNWQREFETWTELNVITYHG 1901
Score = 59.7 bits (143), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 220 EVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLLDL 273
E+ GNW+RSEC VE+GLLT+GW RW E +A + +R VE +AR++ L
Sbjct: 2461 EISPGNWTRSECSNVEKGLLTYGWQRWSECIALSTWRRPVNPAQVEHIARVILL 2514
>gi|260834763|ref|XP_002612379.1| hypothetical protein BRAFLDRAFT_218963 [Branchiostoma floridae]
gi|229297756|gb|EEN68388.1| hypothetical protein BRAFLDRAFT_218963 [Branchiostoma floridae]
Length = 1849
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 159/215 (73%), Positives = 183/215 (85%), Gaps = 3/215 (1%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+SASR M+ YE+F R++ I E YKF LITT+E+IISDCLEL+D WR IIDE
Sbjct: 227 SSASRQMIHRYEMFHRDELGNIIPE--CYKFQSLITTYEVIISDCLELRDIPWRAVIIDE 284
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL++L LEHRVLL+GTPLQNNV ELFSLLNFLEP QF + F+SEF
Sbjct: 285 AHRLKNRNCKLLEGLKILDLEHRVLLTGTPLQNNVEELFSLLNFLEPDQFDSEADFLSEF 344
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V+KLQ LLKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILERNF
Sbjct: 345 GDLKTEDQVSKLQALLKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILERNF 404
Query: 475 SFLSKGT-TSANVPNLMNTMMELRKCCIHPYLLNG 508
+FL+KG +S+NVPNLMNTMMELRKCC HPYL+NG
Sbjct: 405 TFLAKGCGSSSNVPNLMNTMMELRKCCNHPYLING 439
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 84/122 (68%), Gaps = 19/122 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P W +L+ + YKNDN LR YQ+EG+NWL+F+W+N R
Sbjct: 125 RPEPESWHQLDPNVTYKNDNKLREYQMEGVNWLLFNWYN-------------------RR 165
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKT+QS+TF+ + + GI GPFL+IAPLSTI NWQREFE WT++NV+VYH
Sbjct: 166 NCILADEMGLGKTVQSITFLKEIQEQGILGPFLIIAPLSTIANWQREFETWTNVNVVVYH 225
Query: 130 AT 131
+
Sbjct: 226 GS 227
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + + GI GPFL+IAPLSTI NWQREFE WT++NV+VYHG
Sbjct: 184 FLKEIQEQGILGPFLIIAPLSTIANWQREFETWTNVNVVVYHG 226
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
WSR ECF+VE+ LL +GWGRW + L F+ +E+ VE +AR +
Sbjct: 790 WSRVECFRVEKNLLVYGWGRWSDILRTGRFKRNLSEQEVESIARTM 835
>gi|327269727|ref|XP_003219644.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like [Anolis
carolinensis]
Length = 3008
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 180/214 (84%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR M+Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1042 SQASRRMIQSYEMYFKDAQGRAIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1099
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1100 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSESTFMQEF 1159
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1160 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1219
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1220 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1253
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 104/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW KLE S YK +N LR YQLEGLNWL+F+W+N T
Sbjct: 939 ERPPADDWKKLESSREYKINNKLREYQLEGLNWLLFNWYN-------------------T 979
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 980 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1039
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + + +F DA + I+G + A ++T
Sbjct: 1040 HGS-----QASRRMIQSYEMYFKDAQGR-AIKGSYKFHAIITT 1076
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 999 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1047
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L + ++ TE+ VE + R +
Sbjct: 1594 YARSECFRVEKNLLVYGWGRWTDILTHGRYKRQLTEQDVETICRTI 1639
>gi|405964991|gb|EKC30422.1| Chromodomain-helicase-DNA-binding protein 9 [Crassostrea gigas]
Length = 2683
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 151/215 (70%), Positives = 183/215 (85%), Gaps = 3/215 (1%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+S SRNMLQ YE+F++++K Q I + YKFH LITT+E+IISDC L D WR+ IIDE
Sbjct: 574 SSTSRNMLQSYEMFYKDEKGQRIPNQ--YKFHALITTYEVIISDCELLSDIEWRVLIIDE 631
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN CKL+EGLR+ EH+VLLSGTPLQNN EL SLL+FLEP++F + +AF++EF
Sbjct: 632 AHRLKNAKCKLMEGLRMFDCEHQVLLSGTPLQNNTEELHSLLSFLEPERFKSTQAFLAEF 691
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G+LKT+S+V KL+ +LKPMMLRRLKEDVEK++A KEET+VEVELTNIQKKYYR ILERNF
Sbjct: 692 GELKTDSQVEKLKAILKPMMLRRLKEDVEKNLASKEETIVEVELTNIQKKYYRAILERNF 751
Query: 475 SFLSKGT-TSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKGT +SANVPNL+NTMMELRKCC HPYL+ G
Sbjct: 752 TFLSKGTGSSANVPNLLNTMMELRKCCNHPYLIKG 786
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 89/132 (67%), Gaps = 21/132 (15%)
Query: 15 DWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
DWVKLE++ YKN N+LR YQLEG+NWLMFSW N +NCILA
Sbjct: 477 DWVKLEETREYKNGNSLRDYQLEGVNWLMFSWHN-------------------HQNCILA 517
Query: 75 DEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVV 134
DEMGLGKTIQS+TF++ V GI+GPFLV+ PLST+ NW+REFE WT +N IVYH +
Sbjct: 518 DEMGLGKTIQSITFLNEVMLYGIKGPFLVVVPLSTLGNWEREFETWTSINAIVYHGSSTS 577
Query: 135 --LLQTGSKFFR 144
+LQ+ F++
Sbjct: 578 RNMLQSYEMFYK 589
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F++ V GI+GPFLV+ PLST+ NW+REFE WT +N IVYHG
Sbjct: 531 FLNEVMLYGIKGPFLVVVPLSTLGNWEREFETWTSINAIVYHG 573
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 34/46 (73%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ RS+CFKVE+ LL +GWGRWK+ L++ +F+ E+ VE ++R L
Sbjct: 1145 YGRSDCFKVEKNLLVYGWGRWKDILSHGKFKKMLEEKDVENISRAL 1190
>gi|73999130|ref|XP_544097.2| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 1
[Canis lupus familiaris]
Length = 2995
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1048 SQASRRTIQSYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1105
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1106 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1165
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1166 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1225
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1226 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1259
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 87/123 (70%), Gaps = 19/123 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 945 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 985
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 986 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1045
Query: 129 HAT 131
H +
Sbjct: 1046 HGS 1048
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1005 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1053
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1600 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1645
>gi|443696075|gb|ELT96855.1| hypothetical protein CAPTEDRAFT_224509 [Capitella teleta]
Length = 2952
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 149/213 (69%), Positives = 182/213 (85%), Gaps = 2/213 (0%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ASRNM+QEYE++ ++ + + I D YKF+ LITT+E+IISD EL + WR +IDEA
Sbjct: 1099 TASRNMIQEYEMYHKDSEGKRIP--DCYKFNALITTYEVIISDVEELSEIEWRAVVIDEA 1156
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKNRNCKLLEGLR LE RVLL+GTPLQNN +ELFSLLNFLEP+QFS++EA+ EFG
Sbjct: 1157 HRLKNRNCKLLEGLRCFDLEFRVLLTGTPLQNNTDELFSLLNFLEPKQFSSSEAWSQEFG 1216
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
L ++++V+KL+ LLKPMMLRRLK+DVEK++A KEET++EVELTNIQKKYYR ILERNFS
Sbjct: 1217 SLTSDTQVDKLKALLKPMMLRRLKQDVEKNLAAKEETIIEVELTNIQKKYYRAILERNFS 1276
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FLSKG TS+N+PNLMNTMMELRKCC HPYL+ G
Sbjct: 1277 FLSKGGTSSNIPNLMNTMMELRKCCNHPYLVTG 1309
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 86/122 (70%), Gaps = 19/122 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W K+E+SP YKN N LR YQLEG++WL F+W+N +
Sbjct: 996 RPSASRWKKMEESPHYKNGNQLREYQLEGVSWLSFNWYN-------------------KQ 1036
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ +++ GI+GP+L+IAPLSTI NW REFE WTD+N IVYH
Sbjct: 1037 NCILADEMGLGKTIQSITFLHSMYDYGIKGPYLIIAPLSTIGNWSREFEVWTDMNAIVYH 1096
Query: 130 AT 131
T
Sbjct: 1097 GT 1098
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ +++ GI+GP+L+IAPLSTI NW REFE WTD+N IVYHG
Sbjct: 1055 FLHSMYDYGIKGPYLIIAPLSTIGNWSREFEVWTDMNAIVYHG 1097
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 220 EVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
E G ++RS+CFKVE+ LL +GWGRW + L + F+ E ++ +AR +
Sbjct: 1658 ETPLGYFTRSDCFKVEKNLLVYGWGRWDDILLHGRFKRKLQREDMQTVARAM 1709
>gi|432916520|ref|XP_004079330.1| PREDICTED: uncharacterized protein LOC101165345 [Oryzias latipes]
Length = 3266
Score = 318 bits (816), Expect = 3e-84, Method: Composition-based stats.
Identities = 167/322 (51%), Positives = 221/322 (68%), Gaps = 28/322 (8%)
Query: 211 AADYVPKDGEVLYGNWSRSECFKVERGL--LTFGWGRWKEFLANNEFRNGWTEEYVEELA 268
AAD+ + YGN + +++E GL LTF W + + +E G T + + L
Sbjct: 1047 AADWKKLESSREYGNGNALREYQLE-GLNWLTFNWYNSRNCILADEMGLGKTIQSITFLY 1105
Query: 269 RLLDLAGGDG---------------KSFSPTMSSGTDGLKSASASRNMLQEYELFFRNDK 313
+ L G +G + F + ASR ++Q YE++FR+ +
Sbjct: 1106 EMY-LMGIEGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRKIIQAYEMYFRDGQ 1164
Query: 314 NQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLH 373
+ IK +Y+FH +ITTFE+I++DC EL++ WR +IDEAHRLKNRNCKLLEGL+++
Sbjct: 1165 GKIIK--GVYRFHAVITTFEMILADCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMD 1222
Query: 374 LEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPM 433
+EH+VLL+GTPLQN V ELFSLLNFLEP++F + + FM+EFG LKTE +V KLQ +LKPM
Sbjct: 1223 MEHKVLLTGTPLQNTVEELFSLLNFLEPERFPSEQTFMTEFGDLKTEEQVQKLQGILKPM 1282
Query: 434 MLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSK-------GTTSANV 486
MLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NFSFLSK G+ +A+V
Sbjct: 1283 MLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGGAGGGGGSGAASV 1342
Query: 487 PNLMNTMMELRKCCIHPYLLNG 508
PNL+NTMMELRKCC HPYL+NG
Sbjct: 1343 PNLLNTMMELRKCCNHPYLING 1364
Score = 162 bits (411), Expect = 3e-37, Method: Composition-based stats.
Identities = 76/137 (55%), Positives = 92/137 (67%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PPA+DW KLE S Y N N LR YQLEGLNWL F+W+N +R
Sbjct: 1044 RPPAADWKKLESSREYGNGNALREYQLEGLNWLTFNWYN-------------------SR 1084
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYH
Sbjct: 1085 NCILADEMGLGKTIQSITFLYEMYLMGIEGPFLVIAPLSTIPNWEREFRTWTELNVVVYH 1144
Query: 130 ATFVV--LLQTGSKFFR 144
+ ++Q +FR
Sbjct: 1145 GSQASRKIIQAYEMYFR 1161
Score = 75.5 bits (184), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRR 194
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG +
Sbjct: 1103 FLYEMYLMGIEGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQ 1147
Score = 56.6 bits (135), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ RSECF+VE+ LL +GWGRW E LA+ F+ E VE + R L
Sbjct: 1710 YPRSECFRVEKNLLVYGWGRWSEILAHGRFKRPLKEADVETICRAL 1755
>gi|335286466|ref|XP_003355099.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 7 [Sus scrofa]
Length = 2983
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1042 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1099
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1100 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1159
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1160 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1219
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1220 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1253
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 939 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 979
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 980 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1039
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1040 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1076
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 999 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1047
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1594 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1639
>gi|431891799|gb|ELK02333.1| Chromodomain-helicase-DNA-binding protein 7 [Pteropus alecto]
Length = 2982
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1043 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1100
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1101 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1160
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1161 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1220
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1221 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1254
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 940 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 980
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 981 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1040
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1041 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1077
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1000 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1048
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1595 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1640
>gi|358415368|ref|XP_612494.5| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Bos taurus]
Length = 2940
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 999 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1056
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1057 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSETTFMQEF 1116
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1117 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1176
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1177 AFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1210
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 87/123 (70%), Gaps = 19/123 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 896 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 936
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 937 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 996
Query: 129 HAT 131
H +
Sbjct: 997 HGS 999
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 956 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1004
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ +E+ VE + R +
Sbjct: 1551 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRPLSEQDVETICRTI 1596
>gi|359072380|ref|XP_002692716.2| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Bos taurus]
Length = 2935
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 994 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1051
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1052 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSETTFMQEF 1111
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1112 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1171
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1172 AFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1205
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 87/123 (70%), Gaps = 19/123 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 891 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 931
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 932 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 991
Query: 129 HAT 131
H +
Sbjct: 992 HGS 994
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 951 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 999
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ +E+ VE + R +
Sbjct: 1546 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRPLSEQDVETICRTI 1591
>gi|296480623|tpg|DAA22738.1| TPA: kismet-like [Bos taurus]
Length = 2935
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 994 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1051
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1052 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSETTFMQEF 1111
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1112 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1171
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1172 AFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1205
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 891 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 931
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 932 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 991
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 992 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1028
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 951 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 999
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ +E+ VE + R +
Sbjct: 1546 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRPLSEQDVETICRTI 1591
>gi|441647726|ref|XP_004090826.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 2
[Nomascus leucogenys]
Length = 2989
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEETV+EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETVIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S Y+N+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYRNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|124487249|ref|NP_001074886.1| chromodomain-helicase-DNA-binding protein 7 [Mus musculus]
gi|148877247|sp|A2AJK6.1|CHD7_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 7;
Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7
Length = 2986
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1039 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1096
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1097 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1156
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1157 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1216
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1217 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1250
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 936 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 976
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 977 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1036
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1037 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1073
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 996 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1044
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1591 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRAI 1636
>gi|332213902|ref|XP_003256069.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 1
[Nomascus leucogenys]
Length = 2997
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 147/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEETV+EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETVIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S Y+N+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYRNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|392340312|ref|XP_003754036.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Rattus
norvegicus]
Length = 2994
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1038 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1095
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1096 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1155
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1156 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1215
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1216 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1249
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 935 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 975
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 976 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1035
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1036 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1072
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 995 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1043
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE VE + R +
Sbjct: 1599 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEHDVETICRAI 1644
>gi|301759851|ref|XP_002915762.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like
[Ailuropoda melanoleuca]
gi|281345480|gb|EFB21064.1| hypothetical protein PANDA_003773 [Ailuropoda melanoleuca]
Length = 2995
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1047 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1104
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1105 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1164
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1165 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1224
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1225 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1258
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 944 ERPPAVDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 984
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 985 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1044
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1045 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1081
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1004 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1052
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1599 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1644
>gi|148673732|gb|EDL05679.1| mCG20155 [Mus musculus]
Length = 2985
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1039 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1096
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1097 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1156
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1157 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1216
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1217 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1250
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 936 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 976
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 977 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1036
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1037 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1073
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 996 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1044
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1591 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRAI 1636
>gi|432094673|gb|ELK26153.1| Chromodomain-helicase-DNA-binding protein 7 [Myotis davidii]
Length = 2987
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1041 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1098
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1099 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1158
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1159 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1218
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1219 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1252
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 938 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 978
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 979 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1038
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1039 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1075
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 998 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1046
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1593 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRAI 1638
>gi|348557269|ref|XP_003464442.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like [Cavia
porcellus]
Length = 2996
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S Y+N+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYRNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEHDVETICRTI 1646
>gi|392347850|ref|XP_003749947.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Rattus
norvegicus]
Length = 2985
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1038 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1095
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1096 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1155
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1156 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1215
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1216 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1249
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 935 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 975
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 976 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1035
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1036 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1072
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 995 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1043
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE VE + R +
Sbjct: 1590 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEHDVETICRAI 1635
>gi|426236111|ref|XP_004012018.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 7 [Ovis aries]
Length = 2867
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1046 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1103
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1104 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSETTFMQEF 1163
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1164 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1223
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1224 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1257
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 943 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 983
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 984 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1043
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1044 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1080
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1003 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1051
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ +E+ VE + R +
Sbjct: 1598 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRPLSEQDVETICRTI 1643
>gi|194214886|ref|XP_001915803.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Equus
caballus]
Length = 2995
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1048 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1105
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1106 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1165
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1166 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1225
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1226 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1259
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 104/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E+S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 945 ERPPAEDWKKSERSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 985
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 986 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1045
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1046 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1082
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1005 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1053
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1600 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1645
>gi|291388024|ref|XP_002710542.1| PREDICTED: chromodomain helicase DNA binding protein 7 [Oryctolagus
cuniculus]
Length = 2997
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|410987205|ref|XP_003999896.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Felis catus]
Length = 2974
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1048 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1105
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1106 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1165
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1166 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1225
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1226 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1259
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 945 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 985
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 986 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1045
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1046 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1082
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1005 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1053
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1600 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRAI 1645
>gi|395511095|ref|XP_003759797.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Sarcophilus
harrisii]
Length = 2999
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 104/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N T
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------T 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|403288790|ref|XP_003935570.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Saimiri
boliviensis boliviensis]
Length = 2996
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|119607236|gb|EAW86830.1| chromodomain helicase DNA binding protein 7, isoform CRA_a [Homo
sapiens]
gi|119607239|gb|EAW86833.1| chromodomain helicase DNA binding protein 7, isoform CRA_a [Homo
sapiens]
Length = 3011
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1064 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1121
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1122 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1181
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1182 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1241
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1242 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1275
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 961 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 1001
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 1002 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1061
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1062 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1098
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1021 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1069
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1616 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1661
>gi|344273113|ref|XP_003408371.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Loxodonta
africana]
Length = 2997
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|395859802|ref|XP_003802219.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Otolemur
garnettii]
Length = 3071
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1122 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1179
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1180 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1239
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1240 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1299
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1300 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1333
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 1019 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 1059
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 1060 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1119
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1120 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1156
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1079 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1127
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1674 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1719
>gi|332826148|ref|XP_519780.3| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Pan
troglodytes]
Length = 2997
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|426359736|ref|XP_004047121.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 2
[Gorilla gorilla gorilla]
Length = 2989
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|345306816|ref|XP_003428508.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 7-like [Ornithorhynchus anatinus]
Length = 2902
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1042 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1099
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1100 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1159
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1160 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1219
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1220 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1253
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 104/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N T
Sbjct: 939 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------T 979
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 980 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1039
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1040 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1076
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 999 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1047
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1594 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1639
>gi|296226564|ref|XP_002758985.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 2
[Callithrix jacchus]
Length = 2994
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|126321078|ref|XP_001368272.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Monodelphis
domestica]
Length = 2999
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 104/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N T
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------T 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|397475364|ref|XP_003809109.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Pan paniscus]
Length = 2997
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|390353361|ref|XP_003728093.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like
[Strongylocentrotus purpuratus]
Length = 1763
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 143/215 (66%), Positives = 185/215 (86%), Gaps = 3/215 (1%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
S SR+M+ EYE+FFR+ +K ++YKF +LITT+EI+++DC EL + WR+ +IDE
Sbjct: 1224 GSQSRHMIAEYEMFFRDASG--VKIPNIYKFQILITTYEILLADCQELSEIEWRILVIDE 1281
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL++L +EHRVLL+GTPLQNNV+ELFSLLNFLEP +F ++ F+ +F
Sbjct: 1282 AHRLKNRNCKLLEGLKILDMEHRVLLTGTPLQNNVDELFSLLNFLEPGRFRSSVQFLEDF 1341
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ LL+PMMLRRLKEDVEK++APKEET++EVE+T+IQK+YYR ILE+NF
Sbjct: 1342 GDLKTEGQVEKLQQLLRPMMLRRLKEDVEKNLAPKEETIIEVEMTSIQKRYYRAILEKNF 1401
Query: 475 SFLSKGT-TSANVPNLMNTMMELRKCCIHPYLLNG 508
SFL+KG +++N+PNLMNTMMELRKCC HP+L+NG
Sbjct: 1402 SFLTKGAGSTSNLPNLMNTMMELRKCCNHPFLING 1436
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 99/158 (62%), Gaps = 33/158 (20%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
K +P S+W KL K+P YK+DN LR YQLEG+NWL +SW NG++CILAD
Sbjct: 1120 KPRPVKSEWNKLSKTPKYKDDNVLREYQLEGVNWLTYSWCNGQSCILAD----------- 1168
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIV 127
EMGLGKTIQ++ F+ V KTGI GPFLV+APLSTI NWQRE E+WTD+N +V
Sbjct: 1169 --------EMGLGKTIQTIGFLHEVEKTGIPGPFLVLAPLSTIVNWQREVESWTDMNCVV 1220
Query: 128 YHATFVVLLQTGSKFFRICLE---FFVDAVFKTGIRGP 162
YH GS+ + E FF DA +G++ P
Sbjct: 1221 YHG--------GSQSRHMIAEYEMFFRDA---SGVKIP 1247
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V KTGI GPFLV+APLSTI NWQRE E+WTD+N +VYHG
Sbjct: 1181 FLHEVEKTGIPGPFLVLAPLSTIVNWQREVESWTDMNCVVYHG 1223
>gi|223953572|gb|ACN30001.1| chromodomain helicase DNA-binding protein 7 [Vicugna vicugna]
Length = 3000
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 178/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL+ WR +IDE
Sbjct: 1045 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRSIPWRCVVIDE 1102
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1103 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1162
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1163 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1222
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1223 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1256
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 942 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 982
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 983 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1042
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1043 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1079
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1002 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1050
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1597 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRPLTEQDVETICRTI 1642
>gi|426359734|ref|XP_004047120.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 isoform 1
[Gorilla gorilla gorilla]
Length = 2997
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|380814506|gb|AFE79127.1| chromodomain-helicase-DNA-binding protein 7 [Macaca mulatta]
Length = 2998
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|355779714|gb|EHH64190.1| Chromodomain-helicase-DNA-binding protein 7 [Macaca fascicularis]
Length = 2998
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|355697982|gb|EHH28530.1| Chromodomain-helicase-DNA-binding protein 7 [Macaca mulatta]
Length = 2998
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|119607237|gb|EAW86831.1| chromodomain helicase DNA binding protein 7, isoform CRA_b [Homo
sapiens]
Length = 2996
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|54112403|ref|NP_060250.2| chromodomain-helicase-DNA-binding protein 7 [Homo sapiens]
gi|148877246|sp|Q9P2D1.3|CHD7_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 7;
Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7
gi|119607240|gb|EAW86834.1| chromodomain helicase DNA binding protein 7, isoform CRA_d [Homo
sapiens]
gi|225000838|gb|AAI72443.1| Chromodomain helicase DNA binding protein 7 [synthetic construct]
Length = 2997
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|297682946|ref|XP_002819164.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Pongo abelii]
Length = 2997
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|402878334|ref|XP_003902847.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Papio anubis]
Length = 2977
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>gi|297299473|ref|XP_002805403.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like, partial
[Macaca mulatta]
Length = 2990
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1078 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1135
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1136 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1195
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1196 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1255
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1256 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1289
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 975 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 1015
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 1016 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1075
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1076 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1112
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1035 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1083
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1630 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1675
>gi|444720770|gb|ELW61544.1| Chromodomain-helicase-DNA-binding protein 7 [Tupaia chinensis]
Length = 2574
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 549 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 606
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 607 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 666
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 667 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 726
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 727 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 760
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 446 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 486
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 487 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 546
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 547 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 583
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 506 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 554
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ +E+ VE + R +
Sbjct: 1101 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLSEQDVETICRTI 1146
>gi|351713650|gb|EHB16569.1| Chromodomain-helicase-DNA-binding protein 7 [Heterocephalus glaber]
Length = 2988
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 145/214 (67%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + +K YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1047 SQASRRTIQLYEMYFKDPQGRVMKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1104
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1105 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1164
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1165 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1224
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1225 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1258
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 87/123 (70%), Gaps = 19/123 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 944 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 984
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 985 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1044
Query: 129 HAT 131
H +
Sbjct: 1045 HGS 1047
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1004 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1052
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE VE + R +
Sbjct: 1599 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEHDVETICRTI 1644
>gi|117606190|ref|NP_001071054.1| chromodomain-helicase-DNA-binding protein 7 [Gallus gallus]
gi|123883232|sp|Q06A37.1|CHD7_CHICK RecName: Full=Chromodomain-helicase-DNA-binding protein 7;
Short=CHD-7; AltName: Full=ATP-dependent helicase CHD7
gi|115394059|gb|ABI96999.1| chromodomain helicase DNA-binding protein 7 [Gallus gallus]
Length = 3011
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1050 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1107
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1108 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEF 1167
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1168 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1227
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1228 AFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1261
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 104/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N T
Sbjct: 947 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------T 987
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 988 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1047
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1048 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1084
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1007 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1055
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1602 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1647
>gi|449279473|gb|EMC87054.1| Chromodomain-helicase-DNA-binding protein 7 [Columba livia]
Length = 3023
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1051 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1108
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1109 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEF 1168
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1169 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1228
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1229 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1262
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 104/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N T
Sbjct: 948 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------T 988
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 989 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1048
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1049 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1085
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1008 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1056
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1603 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1648
>gi|326917666|ref|XP_003205117.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 7-like [Meleagris gallopavo]
Length = 3011
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1050 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1107
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1108 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEF 1167
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1168 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1227
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1228 AFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1261
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 104/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N T
Sbjct: 947 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------T 987
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 988 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1047
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1048 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1084
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1007 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1055
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1602 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1647
>gi|449486107|ref|XP_002195547.2| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like
[Taeniopygia guttata]
Length = 2887
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KF V+ITTFE+I++DC ELK WR +IDEAHR
Sbjct: 744 SRQMIQQYEMVYRDTQGNPLP--GIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHR 801
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEPQQF + AF+ EFG L
Sbjct: 802 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDL 861
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 862 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 921
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 922 SKGANQHNMPNLINTMMELRKCCNHPYLING 952
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 94/150 (62%), Gaps = 21/150 (14%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++P + W KLEKS YKN N LR YQLEG+NWL+F+W+N
Sbjct: 638 ERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------R 678
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
+NCILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVY
Sbjct: 679 KNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVY 738
Query: 129 HATFVV--LLQTGSKFFRICLEFFVDAVFK 156
H + + ++Q +R + +FK
Sbjct: 739 HGSQISRQMIQQYEMVYRDTQGNPLPGIFK 768
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 698 FLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 755
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1293 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1336
>gi|7243213|dbj|BAA92654.1| KIAA1416 protein [Homo sapiens]
Length = 1967
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 287 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 344
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 345 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 404
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 405 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 464
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 465 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 498
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 184 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 224
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 225 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 284
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 285 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 321
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 244 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 292
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 839 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 884
>gi|363741430|ref|XP_003642493.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Gallus
gallus]
Length = 2696
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KF V+ITTFE+I++DC ELK WR +IDEAHR
Sbjct: 538 SRQMIQQYEMVYRDTQGNPLP--GIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHR 595
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEPQQF + AF+ EFG L
Sbjct: 596 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDL 655
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 656 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 715
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 716 SKGANQHNMPNLINTMMELRKCCNHPYLING 746
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 94/150 (62%), Gaps = 21/150 (14%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++P + W KLEKS YKN N LR YQLEG+NWL+F+W+N
Sbjct: 432 ERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------R 472
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
+NCILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVY
Sbjct: 473 KNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVY 532
Query: 129 HATFVV--LLQTGSKFFRICLEFFVDAVFK 156
H + + ++Q +R + +FK
Sbjct: 533 HGSQISRQMIQQYEMVYRDTQGNPLPGIFK 562
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 492 FLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 549
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1087 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1130
>gi|449269639|gb|EMC80396.1| Chromodomain-helicase-DNA-binding protein 6, partial [Columba
livia]
Length = 2622
Score = 315 bits (806), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KF V+ITTFE+I++DC ELK WR +IDEAHR
Sbjct: 459 SRQMIQQYEMVYRDAQGNPLP--GIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHR 516
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEPQQF + AF+ EFG L
Sbjct: 517 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDL 576
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 577 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 636
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 637 SKGANQHNMPNLINTMMELRKCCNHPYLING 667
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 355 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 395
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 396 CILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 455
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + +FK
Sbjct: 456 SQISRQMIQQYEMVYRDAQGNPLPGIFK 483
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 413 FLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 470
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 471 RDAQGNPLPG 480
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1011 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1054
>gi|301613323|ref|XP_002936158.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7, partial
[Xenopus (Silurana) tropicalis]
Length = 2908
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 180/216 (83%), Gaps = 4/216 (1%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ +WR +IDE
Sbjct: 975 SQASRKTIQLYEMYFKDPQGKIIK--GAYKFHAIITTFEMILTDCPELRNIHWRCVVIDE 1032
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLLNFLEP +F + FM EF
Sbjct: 1033 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLNFLEPDRFPSESNFMQEF 1092
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1093 GDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1152
Query: 475 SFLSKGTTS--ANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1153 AFLSKGGGGGHANVPNLLNTMMELRKCCNHPYLING 1188
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 104/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N+LR YQLEG+NWL+F+W+N
Sbjct: 872 ERPPADDWKKSESSREYKNNNSLREYQLEGVNWLLFNWYN-------------------K 912
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 913 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 972
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q K ++ +F D K I+G + A ++T
Sbjct: 973 HGS-----QASRKTIQLYEMYFKDPQGKI-IKGAYKFHAIITT 1009
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRR 194
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG +
Sbjct: 932 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQ 976
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Query: 216 PKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
P+D + Y +RSECF+VE+ LL +GWGRW + L++ F+ +E+ VE + R +
Sbjct: 1522 PQDKSLGY---ARSECFRVEKNLLVYGWGRWTDILSHGRFKRQLSEQDVETICRTI 1574
>gi|327271626|ref|XP_003220588.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like [Anolis
carolinensis]
Length = 2660
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+ +YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK WR IIDEAHR
Sbjct: 523 SRQMIHQYEMVYRDAQGNPLP--GVFKFHVVITTFEMILADCPELKKIQWRCVIIDEAHR 580
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEPQQF + AF+ EFG L
Sbjct: 581 LKNRNCKLLEGLKLMCLEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDL 640
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ LLKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 641 KTEEQVKKLQSLLKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 700
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 701 SKGANQHNMPNLINTMMELRKCCNHPYLING 731
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 87/125 (69%), Gaps = 19/125 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++P + W KLEKS YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 417 ERPASESWQKLEKSRGYKNNNQLREYQLEGMNWLLFNWYN-------------------M 457
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
+NCILADEMGLGKTIQS+TF+ ++ G+RGPFL+IAPLSTI NW+REF WT++N IVY
Sbjct: 458 KNCILADEMGLGKTIQSITFLFEIYLMGLRGPFLIIAPLSTITNWEREFRTWTEMNAIVY 517
Query: 129 HATFV 133
H + +
Sbjct: 518 HGSQI 522
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ ++ G+RGPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ + + Y
Sbjct: 477 FLFEIYLMGLRGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIHQYEMVY 534
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 535 RDAQGNPLPG 544
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1072 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1115
>gi|355678720|gb|AER96196.1| chromodomain helicase DNA binding protein 7 [Mustela putorius furo]
Length = 808
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 360 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 417
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 418 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 477
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 478 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 537
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 538 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 571
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 257 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 297
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 298 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 357
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 358 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 394
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 317 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 365
>gi|149733277|ref|XP_001502820.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Equus
caballus]
Length = 2717
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 543 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 600
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 601 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 660
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 661 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 720
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 721 SKGANQHNMPNLINTMMELRKCCNHPYLING 751
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 439 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 479
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 480 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 539
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 540 SQISRQMIQQYEMVYRDAQGNPLSGVFK 567
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 497 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 554
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 555 RDAQGNPLSG 564
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1092 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1135
>gi|426242043|ref|XP_004014888.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 6 [Ovis aries]
Length = 2691
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 543 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 600
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 601 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 660
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 661 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 720
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 721 TKGANQHNMPNLINTMMELRKCCNHPYLING 751
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 439 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 479
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 480 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 539
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 540 SQISRQMIQQYEMVYRDAQGNPLSGVFK 567
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 497 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 554
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 555 RDAQGNPLSG 564
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1092 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1135
>gi|297259808|ref|XP_002808003.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 6-like [Macaca mulatta]
Length = 2668
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 523 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 580
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 581 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 640
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 641 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 700
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 701 TKGANQHNMPNLINTMMELRKCCNHPYLING 731
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 419 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 459
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 460 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 519
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 520 SQISRQMIQQYEMVYRDAQGNPLSGVFK 547
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 477 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 534
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 535 RDAQGNPLSG 544
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1140 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1183
>gi|345790058|ref|XP_534421.3| PREDICTED: chromodomain-helicase-DNA-binding protein 6 isoform 1
[Canis lupus familiaris]
Length = 2715
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 723 TKGANQHNMPNLINTMMELRKCCNHPYLING 753
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 441 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 481
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 482 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 541
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 542 SQISRQMIQQYEMVYRDAQGNPLSGVFK 569
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>gi|301766196|ref|XP_002918518.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like,
partial [Ailuropoda melanoleuca]
Length = 2710
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 538 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 595
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 596 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 655
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 656 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 715
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 716 TKGANQHNMPNLINTMMELRKCCNHPYLING 746
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 434 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 474
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 475 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 534
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 535 SQISRQMIQQYEMVYRDAQGNPLSGVFK 562
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 492 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 549
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 550 RDAQGNPLSG 559
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1087 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1130
>gi|410953850|ref|XP_003983583.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Felis
catus]
Length = 2775
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 603 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 660
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 661 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 720
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 721 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 780
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 781 TKGANQHNMPNLINTMMELRKCCNHPYLING 811
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 499 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 539
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 540 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 599
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 600 SQISRQMIQQYEMVYRDAQGNPLSGVFK 627
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 557 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 614
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 615 RDAQGNPLSG 624
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1152 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1195
>gi|281352812|gb|EFB28396.1| hypothetical protein PANDA_006982 [Ailuropoda melanoleuca]
Length = 2707
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 535 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 592
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 593 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 652
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 653 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 712
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 713 TKGANQHNMPNLINTMMELRKCCNHPYLING 743
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 431 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 471
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 472 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 531
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 532 SQISRQMIQQYEMVYRDAQGNPLSGVFK 559
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 489 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 546
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 547 RDAQGNPLSG 556
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1084 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1127
>gi|291409634|ref|XP_002721122.1| PREDICTED: chromodomain helicase DNA binding protein 6 [Oryctolagus
cuniculus]
Length = 2717
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 543 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 600
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 601 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 660
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 661 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 720
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 721 TKGANQHNMPNLINTMMELRKCCNHPYLING 751
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 439 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 479
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 480 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 539
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 540 SQISRQMIQQYEMVYRDAQGNPLSGVFK 567
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 497 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 554
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 555 RDAQGNPLSG 564
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1092 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1135
>gi|432102738|gb|ELK30217.1| Chromodomain-helicase-DNA-binding protein 6 [Myotis davidii]
Length = 2697
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 523 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 580
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 581 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 640
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 641 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 700
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 701 TKGANQHNMPNLINTMMELRKCCNHPYLING 731
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 419 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 459
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F G+ GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 460 CILADEMGLGKTIQSITFLSEIFLRGVHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 519
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 520 SQISRQMIQQYEMVYRDAQGNPLSGVFK 547
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F G+ GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 477 FLSEIFLRGVHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 534
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 535 RDAQGNPLSG 544
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1072 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1115
>gi|61742812|ref|NP_775544.2| chromodomain helicase DNA binding protein 6 [Mus musculus]
Length = 2711
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 544 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 601
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 602 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 661
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 662 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 721
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 722 TKGANQHNMPNLINTMMELRKCCNHPYLING 752
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 92/148 (62%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLE S Y+N N LR YQLEG+NWL+F+W+N +N
Sbjct: 440 PASDAWQKLETSREYRNSNRLREYQLEGMNWLLFNWYN-------------------RKN 480
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+ F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 481 CILADEMGLGKTIQSIAFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 540
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 541 SQISRQMIQQYEMVYRDAQGNPLSGVFK 568
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 498 FLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 555
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 556 RDAQGNPLSG 565
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1093 RAECFRVEKNLLIFGWGRWKDILTHGRFKWPLNEKDMEMICRAL 1136
>gi|223462579|gb|AAI50807.1| Chromodomain helicase DNA binding protein 6 [Mus musculus]
Length = 2711
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 544 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 601
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 602 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 661
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 662 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 721
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 722 TKGANQHNMPNLINTMMELRKCCNHPYLING 752
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 92/148 (62%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLE S Y+N N LR YQLEG+NWL+F+W+N +N
Sbjct: 440 PASDAWQKLETSREYRNSNRLREYQLEGMNWLLFNWYN-------------------RKN 480
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+ F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 481 CILADEMGLGKTIQSIAFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 540
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 541 SQISRQMIQQYEMVYRDAQGNPLSGVFK 568
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 498 FLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 555
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 556 RDAQGNPLSG 565
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1093 RAECFRVEKNLLIFGWGRWKDILTHGRFKWPLNEKDMEMICRAL 1136
>gi|355563129|gb|EHH19691.1| Chromodomain-helicase-DNA-binding protein 6 [Macaca mulatta]
Length = 2639
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 483 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 540
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 541 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 600
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 601 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 660
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 661 TKGANQHNMPNLINTMMELRKCCNHPYLING 691
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 379 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 419
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 420 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 479
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 480 SQISRQMIQQYEMVYRDAQGNPLSGVFK 507
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 437 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 494
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 495 RDAQGNPLSG 504
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1032 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1075
>gi|344279650|ref|XP_003411600.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 6-like [Loxodonta africana]
Length = 2772
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 598 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 655
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 656 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 715
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 716 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 775
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 776 AKGANQHNMPNLINTMMELRKCCNHPYLING 806
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 494 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 534
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 535 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 594
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 595 SQISRQMIQQYEMVYRDAQGNPLSGVFK 622
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 552 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 609
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 610 RDAQGNPLSG 619
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1147 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1190
>gi|19421557|gb|AAK56405.1| chromodomain helicase DNA binding protein 5 [Homo sapiens]
Length = 2713
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 543 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 600
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 601 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 660
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 661 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 720
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 721 TKGANQHNMPNLINTMMELRKCCNHPYLING 751
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 439 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 479
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 480 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 539
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 540 SQISRQMIQQYEMVYRDAQGNPLSGVFK 567
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 497 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 554
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 555 RDAQGNPLSG 564
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1092 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1135
>gi|395828998|ref|XP_003787648.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Otolemur
garnettii]
Length = 2711
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 543 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 600
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 601 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 660
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 661 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 720
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 721 TKGANQHNMPNLINTMMELRKCCNHPYLING 751
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 439 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 479
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 480 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 539
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 540 SQISRQMIQQYEMVYRDAQGNPLSGVFK 567
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 497 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 554
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 555 RDAQGNPLSG 564
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1092 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEVICRAL 1135
>gi|148674355|gb|EDL06302.1| chromodomain helicase DNA binding protein 6 [Mus musculus]
Length = 2695
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 541 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 598
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 599 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 658
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 659 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 718
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 719 TKGANQHNMPNLINTMMELRKCCNHPYLING 749
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 92/148 (62%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLE S Y+N N LR YQLEG+NWL+F+W+N +N
Sbjct: 437 PASDAWQKLETSREYRNSNRLREYQLEGMNWLLFNWYN-------------------RKN 477
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+ F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 478 CILADEMGLGKTIQSIAFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 537
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 538 SQISRQMIQQYEMVYRDAQGNPLSGVFK 565
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 495 FLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 552
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 553 RDAQGNPLSG 562
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1090 RAECFRVEKNLLIFGWGRWKDILTHGRFKWPLNEKDMEMICRAL 1133
>gi|390462609|ref|XP_002806815.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 6 [Callithrix jacchus]
Length = 2714
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GIFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 723 TKGANQHNMPNLINTMMELRKCCNHPYLING 753
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 441 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 481
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 482 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 541
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + +FK
Sbjct: 542 SQISRQMIQQYEMVYRDAQGNPLSGIFK 569
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>gi|355784481|gb|EHH65332.1| Chromodomain-helicase-DNA-binding protein 6 [Macaca fascicularis]
Length = 2716
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 723 TKGANQHNMPNLINTMMELRKCCNHPYLING 753
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 441 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 481
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 482 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 541
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 542 SQISRQMIQQYEMVYRDAQGNPLSGVFK 569
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>gi|343168810|ref|NP_001230229.1| chromodomain helicase DNA binding protein 6 [Bos taurus]
Length = 2721
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG N+PNL+NTMMELRKCC HPYL++G
Sbjct: 723 SKGANQHNMPNLINTMMELRKCCNHPYLISG 753
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 441 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 481
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 482 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 541
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 542 SQISRQMIQQYEMVYRDAQGNPLSGVFK 569
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>gi|383422127|gb|AFH34277.1| chromodomain-helicase-DNA-binding protein 6 [Macaca mulatta]
Length = 2716
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 723 TKGANQHNMPNLINTMMELRKCCNHPYLING 753
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 441 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 481
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 482 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 541
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 542 SQISRQMIQQYEMVYRDAQGNPLSGVFK 569
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>gi|426391703|ref|XP_004062207.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Gorilla
gorilla gorilla]
Length = 2715
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 723 TKGANQHNMPNLINTMMELRKCCNHPYLING 753
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 441 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 481
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 482 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 541
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 542 SQISRQMIQQYEMVYRDAQGNPLSGVFK 569
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>gi|119596382|gb|EAW75976.1| chromodomain helicase DNA binding protein 6, isoform CRA_c [Homo
sapiens]
Length = 2750
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 580 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 637
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 638 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 697
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 698 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 757
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 758 TKGANQHNMPNLINTMMELRKCCNHPYLING 788
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 476 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 516
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 517 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 576
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 577 SQISRQMIQQYEMVYRDAQGNPLSGVFK 604
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 534 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 591
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 592 RDAQGNPLSG 601
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1129 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1172
>gi|402882510|ref|XP_003904783.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Papio
anubis]
Length = 2716
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 723 TKGANQHNMPNLINTMMELRKCCNHPYLING 753
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 441 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 481
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 482 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 541
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 542 SQISRQMIQQYEMVYRDAQGNPLSGVFK 569
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>gi|29244924|ref|NP_115597.3| chromodomain-helicase-DNA-binding protein 6 [Homo sapiens]
gi|296439466|sp|Q8TD26.4|CHD6_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 6;
Short=CHD-6; AltName: Full=ATP-dependent helicase CHD6;
AltName: Full=Radiation-induced gene B protein
gi|119596381|gb|EAW75975.1| chromodomain helicase DNA binding protein 6, isoform CRA_b [Homo
sapiens]
gi|225000154|gb|AAI72397.1| Chromodomain helicase DNA binding protein 6 [synthetic construct]
Length = 2715
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 723 TKGANQHNMPNLINTMMELRKCCNHPYLING 753
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 441 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 481
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 482 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 541
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 542 SQISRQMIQQYEMVYRDAQGNPLSGVFK 569
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>gi|354491180|ref|XP_003507734.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like
[Cricetulus griseus]
Length = 2714
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 544 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 601
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 602 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 661
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 662 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 721
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 722 TKGANQHNMPNLINTMMELRKCCNHPYLING 752
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 93/148 (62%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLE S YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 440 PASDAWQKLETSREYKNSNRLREYQLEGMNWLLFNWYN-------------------RKN 480
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 481 CILADEMGLGKTIQSITFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 540
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 541 SQISRQMIQQYEMVYRDAQGNPLSGVFK 568
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 498 FLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 555
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 556 RDAQGNPLSG 565
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1093 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1136
>gi|432857891|ref|XP_004068777.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like
[Oryzias latipes]
Length = 3255
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 176/211 (83%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+ +YE+F+R+ + I KFH LITTFE+I++DC EL+ WR +IDEAHR
Sbjct: 561 SRQMILQYEMFYRDSQGNNIPGG--LKFHGLITTFEMIMTDCPELRKLQWRCVVIDEAHR 618
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L++LEH+VLL+GTPLQN+V ELFSLLNFLEPQQF + AF+ EFG L
Sbjct: 619 LKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSEGAFLEEFGDL 678
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KT+ +V KLQ +LKPMMLRRLK+DVEK++APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 679 KTDEQVKKLQSILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 738
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG N+PNL+NTMMELRKCC HPYL+ G
Sbjct: 739 SKGANQHNMPNLINTMMELRKCCNHPYLITG 769
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 85/125 (68%), Gaps = 19/125 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PP W KLE S Y++ N LR YQLEG+NWL+F+W+N
Sbjct: 455 ERPPPEKWQKLENSRDYRSGNQLREYQLEGMNWLLFNWYN-------------------R 495
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
+NCILADEMGLGKTIQS+TF+ +F GIRGPFL+IAPLSTI NW+REF WT +NVIVY
Sbjct: 496 KNCILADEMGLGKTIQSITFLYEIFSMGIRGPFLIIAPLSTITNWEREFRTWTHMNVIVY 555
Query: 129 HATFV 133
H + +
Sbjct: 556 HGSQI 560
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ +F GIRGPFL+IAPLSTI NW+REF WT +NVIVYHG ++SR+
Sbjct: 515 FLYEIFSMGIRGPFLIIAPLSTITNWEREFRTWTHMNVIVYHG--SQISRQ 563
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ TE +E + R L
Sbjct: 1110 RAECFRVEKNLLIFGWGRWKDILNHGRFKWHLTERDMEIICRAL 1153
>gi|380817104|gb|AFE80426.1| chromodomain-helicase-DNA-binding protein 6 [Macaca mulatta]
Length = 2716
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 723 TKGANQHNMPNLINTMMELRKCCNHPYLING 753
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 441 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 481
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 482 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 541
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 542 SQISRQMIQQYEMVYRDAQGNPLSGVFK 569
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>gi|332858468|ref|XP_001148310.2| PREDICTED: chromodomain-helicase-DNA-binding protein 6 isoform 6
[Pan troglodytes]
gi|410208168|gb|JAA01303.1| chromodomain helicase DNA binding protein 6 [Pan troglodytes]
gi|410252212|gb|JAA14073.1| chromodomain helicase DNA binding protein 6 [Pan troglodytes]
gi|410297958|gb|JAA27579.1| chromodomain helicase DNA binding protein 6 [Pan troglodytes]
gi|410350331|gb|JAA41769.1| chromodomain helicase DNA binding protein 6 [Pan troglodytes]
Length = 2715
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 723 TKGANQHNMPNLINTMMELRKCCNHPYLING 753
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 441 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 481
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 482 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 541
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 542 SQISRQMIQQYEMVYRDAQGNPLSGVFK 569
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>gi|440910953|gb|ELR60688.1| Chromodomain-helicase-DNA-binding protein 6, partial [Bos grunniens
mutus]
Length = 2723
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 547 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 604
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 605 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 664
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 665 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 724
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG N+PNL+NTMMELRKCC HPYL++G
Sbjct: 725 SKGANQHNMPNLINTMMELRKCCNHPYLISG 755
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 443 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 483
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 484 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 543
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 544 SQISRQMIQQYEMVYRDAQGNPLSGVFK 571
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 501 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 558
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 559 RDAQGNPLSG 568
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1096 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1139
>gi|397511162|ref|XP_003825948.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Pan
paniscus]
Length = 2715
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 723 TKGANQHNMPNLINTMMELRKCCNHPYLING 753
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 441 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 481
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 482 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 541
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 542 SQISRQMIQQYEMVYRDAQGNPLSGVFK 569
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>gi|348563829|ref|XP_003467709.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like isoform
2 [Cavia porcellus]
Length = 2709
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPTQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 723 TKGANQHNMPNLINTMMELRKCCNHPYLING 753
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 441 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 481
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 482 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 541
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 542 SQISRQMIQQYEMVYRDAQGNPLSGVFK 569
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>gi|348563827|ref|XP_003467708.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like isoform
1 [Cavia porcellus]
Length = 2716
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPTQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 723 TKGANQHNMPNLINTMMELRKCCNHPYLING 753
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 441 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 481
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 482 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 541
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 542 SQISRQMIQQYEMVYRDAQGNPLSGVFK 569
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>gi|119596384|gb|EAW75978.1| chromodomain helicase DNA binding protein 6, isoform CRA_e [Homo
sapiens]
Length = 2731
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 580 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 637
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 638 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 697
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 698 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 757
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 758 TKGANQHNMPNLINTMMELRKCCNHPYLING 788
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 476 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 516
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 517 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 576
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 577 SQISRQMIQQYEMVYRDAQGNPLSGVFK 604
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 534 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 591
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 592 RDAQGNPLSG 601
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1129 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1172
>gi|157821521|ref|NP_001101267.1| chromodomain-helicase-DNA-binding protein 6 [Rattus norvegicus]
gi|149043033|gb|EDL96607.1| chromodomain helicase DNA binding protein 6 (predicted) [Rattus
norvegicus]
Length = 2698
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W +IDEAHR
Sbjct: 544 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVVIDEAHR 601
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 602 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 661
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 662 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 721
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 722 TKGANQHNMPNLINTMMELRKCCNHPYLING 752
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 94/153 (61%), Gaps = 21/153 (13%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
KP ++P + W KLE S YKN N LR YQLEG+NWL+F+W+N
Sbjct: 435 KPVERPASDAWQKLETSREYKNSNRLREYQLEGMNWLLFNWYN----------------- 477
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
+NCILADEMGLGKTIQS+ F+ +F GI GPFL+IAPLSTI NW+REF WT++N
Sbjct: 478 --RKNCILADEMGLGKTIQSIAFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNA 535
Query: 126 IVYHATFVV--LLQTGSKFFRICLEFFVDAVFK 156
IVYH + + ++Q +R + VFK
Sbjct: 536 IVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFK 568
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 498 FLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 555
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 556 RDAQGNPLSG 565
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LLTFGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1093 RAECFRVEKNLLTFGWGRWKDILTHGRFKWPLNEKDMEVICRAL 1136
>gi|403290683|ref|XP_003936439.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Saimiri
boliviensis boliviensis]
Length = 2716
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 723 TKGANQHNMPNLINTMMELRKCCNHPYLING 753
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 441 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 481
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 482 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 541
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 542 SQISRQMIQQYEMVYRDAQGNPLSGVFK 569
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>gi|332209064|ref|XP_003253631.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 6 [Nomascus leucogenys]
Length = 2722
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 553 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 610
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 611 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 670
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 671 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 730
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 731 TKGANQHNMPNLINTMMELRKCCNHPYLING 761
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 449 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 489
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 490 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 549
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 550 SQISRQMIQQYEMVYRDAQGNPLSGVFK 577
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 507 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 564
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 565 RDAQGNPLSG 574
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1102 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1145
>gi|126291802|ref|XP_001381614.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Monodelphis
domestica]
Length = 2716
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 542 SRQMIQQYEMLYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 599
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 600 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 659
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 660 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 719
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 720 AKGANQHNMPNLINTMMELRKCCNHPYLING 750
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 95/148 (64%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN+N LR YQLEG+NWL+F+W+N +N
Sbjct: 438 PASDSWQKLEKSREYKNNNQLREYQLEGMNWLLFNWYN-------------------RKN 478
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 479 CILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 538
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 539 SQISRQMIQQYEMLYRDAQGNPLSGVFK 566
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 496 FLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMLY 553
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 554 RDAQGNPLSG 563
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1091 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1134
>gi|26348885|dbj|BAC38082.1| unnamed protein product [Mus musculus]
Length = 891
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 544 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 601
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 602 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 661
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 662 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 721
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG NVPNL+NTMMELRKCC HPYL+NG
Sbjct: 722 TKGANQHNVPNLINTMMELRKCCNHPYLING 752
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 92/148 (62%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLE S Y+N N LR YQLEG+NWL+F+W+N +N
Sbjct: 440 PASDAWQKLETSREYRNSNRLREYQLEGMNWLLFNWYN-------------------RKN 480
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+ F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 481 CILADEMGLGKTIQSIAFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 540
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 541 SQISRQMIQQYEMVYRDAQGNPLSGVFK 568
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 498 FLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 555
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 556 RDAQGNPLSG 565
>gi|351704214|gb|EHB07133.1| Chromodomain-helicase-DNA-binding protein 6 [Heterocephalus glaber]
Length = 2756
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 601 SRQMIQQYEMVYRDTQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 658
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 659 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPTQFPSETAFLEEFGDL 718
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 719 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 778
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 779 TKGANQHNMPNLINTMMELRKCCNHPYLING 809
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 497 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 537
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 538 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 597
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 598 SQISRQMIQQYEMVYRDTQGNPLSGVFK 625
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 555 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 612
Query: 210 VAADYVPKDG 219
P G
Sbjct: 613 RDTQGNPLSG 622
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1150 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1193
>gi|395752329|ref|XP_002830358.2| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Pongo
abelii]
Length = 2424
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 723 TKGANQHNMPNLINTMMELRKCCNHPYLING 753
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 441 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 481
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 482 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 541
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 542 SQISRQMIQQYEMVYRDAQGNPLSGVFK 569
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>gi|395505398|ref|XP_003757029.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Sarcophilus
harrisii]
Length = 2721
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 546 SRQMIQQYEMLYRDAQGNPLS--GIFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 603
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 604 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 663
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 664 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 723
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 724 AKGANQHNMPNLINTMMELRKCCNHPYLING 754
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 95/148 (64%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN+N LR YQLEG+NWL+F+W+N +N
Sbjct: 442 PASDSWQKLEKSREYKNNNQLREYQLEGMNWLLFNWYN-------------------RKN 482
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 483 CILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 542
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + +FK
Sbjct: 543 SQISRQMIQQYEMLYRDAQGNPLSGIFK 570
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 500 FLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMLY 557
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 558 RDAQGNPLSG 567
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1095 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1138
>gi|348540018|ref|XP_003457485.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like
[Oreochromis niloticus]
Length = 2599
Score = 311 bits (796), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 145/213 (68%), Positives = 177/213 (83%), Gaps = 3/213 (1%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++DK I YKF LITTFE+++SDC EL++ WR IIDEAH
Sbjct: 1009 ASRQMIQQYEMYCKDDKEHLIP--GAYKFDALITTFEMVLSDCPELREIAWRCVIIDEAH 1066
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L++L LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 1067 RLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSETEFLRDFGD 1126
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELT+IQKKYYR ILERNFSF
Sbjct: 1127 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTDIQKKYYRAILERNFSF 1186
Query: 477 LSKGTTS-ANVPNLMNTMMELRKCCIHPYLLNG 508
LS G +S +NVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1187 LSLGASSNSNVPNLLNTMMELRKCCNHPYLING 1219
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 94/149 (63%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PPAS W KLE++ YKN NTLR YQLEG+NWL+F+W+N +NCILADEMGL
Sbjct: 905 RPPASSWKKLEETREYKNGNTLREYQLEGVNWLLFNWYNRQNCILADEMGL--------- 955
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
GKTIQS+ + V+ G++GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 956 ----------GKTIQSIALLSEVYAAGVQGPFLVIAPLSTITNWEREFSTWTNMNAIVYH 1005
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ ++Q + + E + +K
Sbjct: 1006 GSLASRQMIQQYEMYCKDDKEHLIPGAYK 1034
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 33/39 (84%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
V+ G++GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 968 VYAAGVQGPFLVIAPLSTITNWEREFSTWTNMNAIVYHG 1006
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G + R++CF+VE+ LL +GWGRW++ L++ + +E VE + R++
Sbjct: 1561 GGYGRTDCFRVEKHLLVYGWGRWRDILSHARCKRRLSERDVETICRVI 1608
>gi|194384680|dbj|BAG59500.1| unnamed protein product [Homo sapiens]
Length = 1014
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 523 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 580
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 581 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 640
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 641 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 700
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 701 TKGANQHNMPNLINTMMELRKCCNHPYLING 731
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 419 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 459
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 460 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 519
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 520 SQISRQMIQQYEMVYRDAQGNPLSGVFK 547
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 477 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 534
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 535 RDAQGNPLSG 544
>gi|344237002|gb|EGV93105.1| Chromodomain-helicase-DNA-binding protein 6 [Cricetulus griseus]
Length = 2031
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 542 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 599
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 600 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 659
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 660 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 719
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 720 TKGANQHNMPNLINTMMELRKCCNHPYLING 750
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 93/148 (62%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLE S YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 438 PASDAWQKLETSREYKNSNRLREYQLEGMNWLLFNWYN-------------------RKN 478
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 479 CILADEMGLGKTIQSITFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 538
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 539 SQISRQMIQQYEMVYRDAQGNPLSGVFK 566
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 496 FLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 553
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 554 RDAQGNPLSG 563
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1091 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1134
>gi|345325257|ref|XP_001509337.2| PREDICTED: chromodomain-helicase-DNA-binding protein 6
[Ornithorhynchus anatinus]
Length = 2443
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 177/211 (83%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GIFKFHVVITTFEMILADCPELKKIQWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPLQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 723 AKGANQHNMPNLINTMMELRKCCNHPYLING 753
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 94/150 (62%), Gaps = 21/150 (14%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++P + W KLEKS YKN N LR YQLEG+NWL+F+W+N
Sbjct: 439 ERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------R 479
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
+NCILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVY
Sbjct: 480 KNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVY 539
Query: 129 HATFVV--LLQTGSKFFRICLEFFVDAVFK 156
H + + ++Q +R + +FK
Sbjct: 540 HGSQISRQMIQQYEMVYRDAQGNPLSGIFK 569
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>gi|119596380|gb|EAW75974.1| chromodomain helicase DNA binding protein 6, isoform CRA_a [Homo
sapiens]
Length = 952
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 580 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 637
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 638 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 697
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 698 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 757
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 758 TKGANQHNMPNLINTMMELRKCCNHPYLING 788
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 476 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 516
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 517 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 576
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 577 SQISRQMIQQYEMVYRDAQGNPLSGVFK 604
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 534 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 591
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 592 RDAQGNPLSG 601
>gi|348520451|ref|XP_003447741.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like
[Oreochromis niloticus]
Length = 3518
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 175/211 (82%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+ +YE+F R+ + I + KFH LITTFE+I++DC ELK +WR +IDEAHR
Sbjct: 659 SRQMILQYEMFHRDPQGNTIP--GVLKFHGLITTFEMIMADCPELKKLHWRCVVIDEAHR 716
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L++LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + F+ EFG L
Sbjct: 717 LKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPLQFPSESTFLEEFGDL 776
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KT+ +V KLQ +LKPMMLRRLK+DVEK++APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 777 KTDEQVKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 836
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG N+PNL+NTMMELRKCC HPYL+ G
Sbjct: 837 SKGANQHNMPNLINTMMELRKCCNHPYLITG 867
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 85/125 (68%), Gaps = 19/125 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++P W KLE+S Y+N N LR YQLEG+NWL+F+W+N
Sbjct: 553 ERPSPEKWQKLERSRDYRNGNQLREYQLEGMNWLLFNWYN-------------------R 593
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
+NCILADEMGLGKTIQS+TF+ +F GIRGPFL+IAPLSTI NW+REF WT +NVIVY
Sbjct: 594 KNCILADEMGLGKTIQSITFLYEIFSMGIRGPFLIIAPLSTITNWEREFRTWTHMNVIVY 653
Query: 129 HATFV 133
H + +
Sbjct: 654 HGSQI 658
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ +F GIRGPFL+IAPLSTI NW+REF WT +NVIVYHG ++SR+
Sbjct: 613 FLYEIFSMGIRGPFLIIAPLSTITNWEREFRTWTHMNVIVYHG--SQISRQ 661
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ TE +E + R L
Sbjct: 1208 RAECFRVEKNLLIFGWGRWKDILNHGRFKWHLTERDMEVICRAL 1251
>gi|211853152|gb|AAI68553.1| chd9 protein [Xenopus (Silurana) tropicalis]
Length = 2753
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/211 (68%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I YKFH +ITTFE+I+ C EL WR I DEAHR
Sbjct: 810 SRQMIQQYEMYFRDSQGRIIWGS--YKFHAIITTFEMILGGCPELNAIEWRCVIFDEAHR 867
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEPQ+F + FM EFG L
Sbjct: 868 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPQRFPSESTFMQEFGDL 927
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NF+FL
Sbjct: 928 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFL 987
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG ANVPNL+NTMMELRKCC HPYL+ G
Sbjct: 988 SKGAGQANVPNLVNTMMELRKCCNHPYLIKG 1018
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 90/138 (65%), Gaps = 21/138 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PP + W K+ +S YK N LR YQLEGLNWL+F+W+N
Sbjct: 704 ERPPPNSWKKINQSREYKIGNQLREYQLEGLNWLLFNWYN-------------------R 744
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ I GPFL+IAPLSTI NW+REF WTDLNV+VY
Sbjct: 745 RNCILADEMGLGKTIQSITFLQEIYLNRIPGPFLIIAPLSTIANWEREFRTWTDLNVVVY 804
Query: 129 HATFVV--LLQTGSKFFR 144
H + + ++Q +FR
Sbjct: 805 HGSMISRQMIQQYEMYFR 822
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ ++ I GPFL+IAPLSTI NW+REF WTDLNV+VYHG
Sbjct: 764 FLQEIYLNRIPGPFLIIAPLSTIANWEREFRTWTDLNVVVYHG 806
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 11/71 (15%)
Query: 201 DKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWT 260
DK +LR Y A+ + R+ECF+VE+ LL +GWGRW++ L++ F+
Sbjct: 1342 DKPKLRRPYDRAN-----------GYGRTECFRVEKNLLVYGWGRWRDILSHGRFKRQLN 1390
Query: 261 EEYVEELARLL 271
E+ VE + R L
Sbjct: 1391 EQDVEIICRAL 1401
>gi|156401565|ref|XP_001639361.1| predicted protein [Nematostella vectensis]
gi|156226489|gb|EDO47298.1| predicted protein [Nematostella vectensis]
Length = 1360
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 149/215 (69%), Positives = 184/215 (85%), Gaps = 3/215 (1%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+++SR+++QEYE ++R++ Q I +++KF VLITT+EIII+D ++L WR IIDE
Sbjct: 310 SASSRHLIQEYEFYYRDEHGQPIP--NIFKFQVLITTYEIIIADNMQLSTVPWRAVIIDE 367
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL L +EHR+LL+GTPLQNNV ELFSLLNFLEP QF + AF+ EF
Sbjct: 368 AHRLKNRNCKLLEGLNNLQMEHRILLTGTPLQNNVEELFSLLNFLEPSQFPSQGAFLMEF 427
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTES+V+KL+ LLKPMMLRRLKEDVEK+IAPKEET++EVELT +QKK+YR ILERNF
Sbjct: 428 GDLKTESQVDKLKQLLKPMMLRRLKEDVEKNIAPKEETIIEVELTTVQKKFYRAILERNF 487
Query: 475 SFLSKGTTS-ANVPNLMNTMMELRKCCIHPYLLNG 508
+FL+KGT+S ANVPNLMNTMMELRKCC HP+L+ G
Sbjct: 488 AFLAKGTSSTANVPNLMNTMMELRKCCNHPFLITG 522
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/139 (52%), Positives = 91/139 (65%), Gaps = 21/139 (15%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
+ +P +W KLE SPVYK++NTLR YQLEG+NWLMF W N
Sbjct: 206 RPRPYPHEWHKLETSPVYKDENTLREYQLEGVNWLMFCWCN------------------- 246
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIV 127
+N ILADEMGLGKTIQS+ F+ + + GIRGP LVIAPLSTI NWQREFE+W D+N +V
Sbjct: 247 RQNSILADEMGLGKTIQSIAFLFEMQRYGIRGPNLVIAPLSTISNWQREFESWNDINAVV 306
Query: 128 YH--ATFVVLLQTGSKFFR 144
YH A+ L+Q ++R
Sbjct: 307 YHGSASSRHLIQEYEFYYR 325
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 32/37 (86%)
Query: 156 KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
+ GIRGP LVIAPLSTI NWQREFE+W D+N +VYHG
Sbjct: 273 RYGIRGPNLVIAPLSTISNWQREFESWNDINAVVYHG 309
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+W+R ECF+VE+ LL +GWGR+KE L + F+ E VE ++R +
Sbjct: 848 SSWTRVECFRVEKNLLIYGWGRFKEILTHGRFKTKIGERDVESISRTI 895
>gi|326931681|ref|XP_003211955.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like
[Meleagris gallopavo]
Length = 2658
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/212 (68%), Positives = 178/212 (83%), Gaps = 3/212 (1%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KF V+ITTFE+I++DC ELK WR +IDEAHR
Sbjct: 538 SRQMIQQYEMVYRDTQGNPLP--GIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHR 595
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEPQQF + AF+ EFG L
Sbjct: 596 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDL 655
Query: 418 KTESEVNKLQLLLKPMMLRRLKED-VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
KTE +V KLQ +LKPMMLRRLK+D VE+S+APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 656 KTEEQVKKLQSILKPMMLRRLKDDVVEESLAPKQETIIEVELTNIQKKYYRAILEKNFSF 715
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 716 LSKGANQHNMPNLINTMMELRKCCNHPYLING 747
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 94/150 (62%), Gaps = 21/150 (14%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++P + W KLEKS YKN N LR YQLEG+NWL+F+W+N
Sbjct: 432 ERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------R 472
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
+NCILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVY
Sbjct: 473 KNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVY 532
Query: 129 HATFVV--LLQTGSKFFRICLEFFVDAVFK 156
H + + ++Q +R + +FK
Sbjct: 533 HGSQISRQMIQQYEMVYRDTQGNPLPGIFK 562
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 492 FLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 549
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1088 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1131
>gi|431894397|gb|ELK04197.1| Chromodomain-helicase-DNA-binding protein 6 [Pteropus alecto]
Length = 1543
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 547 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 604
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 605 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 664
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 665 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 724
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 725 TKGANQHNMPNLINTMMELRKCCNHPYLING 755
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 443 PASDAWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 483
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 484 CILADEMGLGKTIQSITFLSEIFFRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 543
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 544 SQISRQMIQQYEMVYRDAQGNPLSGVFK 571
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 501 FLSEIFFRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 558
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 559 RDAQGNPLSG 568
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1059 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1102
>gi|74209142|dbj|BAE24963.1| unnamed protein product [Mus musculus]
Length = 1733
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 543 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 600
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 601 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 660
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 661 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 720
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 721 TKGANQHNMPNLINTMMELRKCCNHPYLING 751
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 92/148 (62%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLE S Y+N N LR YQLEG+NWL+F+W+N +N
Sbjct: 439 PASDAWQKLETSREYRNSNRLREYQLEGMNWLLFNWYN-------------------RKN 479
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+ F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 480 CILADEMGLGKTIQSIAFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 539
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 540 SQISRQMIQQYEMVYRDAQGNPLSGVFK 567
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 497 FLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 554
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 555 RDAQGNPLSG 564
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1092 RAECFRVEKNLLIFGWGRWKDILTHGRFKWPLNEKDMEMICRAL 1135
>gi|363738135|ref|XP_414088.3| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9 [Gallus gallus]
Length = 2875
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + ++ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 941 SRQMIQQYEMYFRDSQGRIVR--GTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHR 998
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F FM EFG L
Sbjct: 999 LKNRNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDL 1058
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NF+FL
Sbjct: 1059 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFL 1118
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG ANVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1119 SKGAGQANVPNLVNTMMELRKCCNHPYLIKG 1149
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 95/149 (63%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP + W K+E S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 836 RPPPNSWKKIEHSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 876
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + +GIRGPFL+IAPLSTI NW+REF WTDLNV+VYH
Sbjct: 877 NCILADEMGLGKTIQSITFLYEILLSGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYH 936
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR V ++
Sbjct: 937 GSMISRQMIQQYEMYFRDSQGRIVRGTYR 965
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + +GIRGPFL+IAPLSTI NW+REF WTDLNV+VYHG
Sbjct: 895 FLYEILLSGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHG 937
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E+ VE + R L
Sbjct: 1487 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRAL 1532
>gi|410924259|ref|XP_003975599.1| PREDICTED: chromodomain-helicase-DNA-binding protein 7-like,
partial [Takifugu rubripes]
Length = 2183
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 144/219 (65%), Positives = 182/219 (83%), Gaps = 7/219 (3%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE+++R+ + + IK +Y+FH +ITTFE+I++DC EL+ WR +IDE
Sbjct: 63 SQASRKTIQAYEMYYRDTQGKIIK--GVYRFHAVITTFEMILADCPELRSVPWRCVVIDE 120
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ +EH+VLL+GTPLQN V ELFSLLNFLEP++F + + FM+EF
Sbjct: 121 AHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPERFPSEQTFMTEF 180
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 181 GDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 240
Query: 475 SFLSK-----GTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFLSK G ++VPNL+NTMMELRKCC HPYL+NG
Sbjct: 241 SFLSKGGSGGGGGGSSVPNLLNTMMELRKCCNHPYLING 279
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ I GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 1 RNCILADEMGLGKTIQSITFLFEMYLKAIEGPFLVIAPLSTIPNWEREFRTWTELNVVVY 60
Query: 129 HATFVV--LLQTGSKFFRICLEFFVDAVFK 156
H + +Q ++R + V++
Sbjct: 61 HGSQASRKTIQAYEMYYRDTQGKIIKGVYR 90
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 35/43 (81%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ ++ I GPFLVIAPLSTIPNW+REF WT+LNV+VYHG
Sbjct: 20 FLFEMYLKAIEGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG 62
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ RSECF+VE+ LL +GWGRW + LA+ F+ E VE + R L
Sbjct: 622 YPRSECFRVEKNLLVYGWGRWNDILAHGRFKRPMKETDVETICRAL 667
>gi|432914383|ref|XP_004079085.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 8-like [Oryzias latipes]
Length = 2583
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 177/213 (83%), Gaps = 3/213 (1%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++DK I YKF LITTFE+++SDC EL++ +WR IIDEAH
Sbjct: 1003 ASRQMIQQYEMYCKDDKGHLIP--GAYKFDALITTFEMVLSDCPELREISWRCVIIDEAH 1060
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L++L LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 1061 RLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLRDFGD 1120
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELT++QKKYYR ILERNFSF
Sbjct: 1121 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSF 1180
Query: 477 LSKGTTS-ANVPNLMNTMMELRKCCIHPYLLNG 508
LS G S +NVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1181 LSLGANSNSNVPNLLNTMMELRKCCNHPYLING 1213
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 83/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PPAS W KLE++ YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 899 RPPASSWKKLEETREYKNGNILREYQLEGVNWLLFNWYN-------------------RQ 939
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ + V+ GI+GPFLVIAPLSTI NW+REF WT +N IVYH
Sbjct: 940 NCILADEMGLGKTIQSIALLSEVYTAGIQGPFLVIAPLSTITNWEREFCTWTQMNAIVYH 999
Query: 130 ATFV 133
+
Sbjct: 1000 GSLA 1003
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/39 (71%), Positives = 32/39 (82%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
V+ GI+GPFLVIAPLSTI NW+REF WT +N IVYHG
Sbjct: 962 VYTAGIQGPFLVIAPLSTITNWEREFCTWTQMNAIVYHG 1000
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G + R++CF+VE+ LL +GWGRW++ L + + +E VE + R++
Sbjct: 1559 GGYGRTDCFRVEKHLLVYGWGRWRDILLHARCKRRLSERDVETICRVI 1606
>gi|47228067|emb|CAF97696.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2331
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 178/213 (83%), Gaps = 3/213 (1%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ +++K+ I YKF LITTFE+I+SDC EL++ +WR IIDEAH
Sbjct: 987 ASRQMIQQYEMYCKDEKDHLIP--GAYKFDALITTFEMILSDCPELREISWRCVIIDEAH 1044
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+++ LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ EFG
Sbjct: 1045 RLKNRNCKLLDSLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLREFGD 1104
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELT++QKKYYR ILERNFSF
Sbjct: 1105 LKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSF 1164
Query: 477 LSKGTTS-ANVPNLMNTMMELRKCCIHPYLLNG 508
LS G S +NVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1165 LSLGANSNSNVPNLLNTMMELRKCCNHPYLING 1197
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 83/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P W KLE+S YKN NTLR YQLEG+NWL+F+W+N +
Sbjct: 883 RPSPGSWKKLEESREYKNANTLREYQLEGVNWLLFNWYN-------------------RQ 923
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+T + ++ G++GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 924 NCILADEMGLGKTIQSITLLSEIYAAGVQGPFLVIAPLSTITNWEREFSTWTNMNAIVYH 983
Query: 130 ATFV 133
+
Sbjct: 984 GSLA 987
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 33/39 (84%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
++ G++GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 946 IYAAGVQGPFLVIAPLSTITNWEREFSTWTNMNAIVYHG 984
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G + R++CF+VE+ LL +GWGRW++ L++ + +E VE + R++
Sbjct: 1542 GGYGRTDCFRVEKHLLVYGWGRWRDILSHARCKRRLSERDVETICRVI 1589
>gi|417407016|gb|JAA50143.1| Putative chromatin remodeling complex swi/snf component swi2
[Desmodus rotundus]
Length = 2583
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1438 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|189515794|ref|XP_697956.3| PREDICTED: chromodomain-helicase-DNA-binding protein 7 [Danio rerio]
Length = 3094
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 145/222 (65%), Positives = 179/222 (80%), Gaps = 10/222 (4%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE+++R+ + + IK YKFH +ITTFE+I++DC EL++ WR IIDE
Sbjct: 1093 SQASRKTIQAYEMYYRDTQGRIIK--GAYKFHAVITTFEMILTDCPELRNVPWRCVIIDE 1150
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ +EH+VLL+GTPLQN V ELFSLLNFLEP +F + FM EF
Sbjct: 1151 AHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPDRFPSESTFMQEF 1210
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTN+QKKYYR ILE+NF
Sbjct: 1211 GDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNVQKKYYRAILEKNF 1270
Query: 475 SFLSK--------GTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSK G +NVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1271 AFLSKSGAGGGSGGGGGSNVPNLLNTMMELRKCCNHPYLING 1312
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 95/150 (63%), Gaps = 21/150 (14%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PP SDW K E S YKN N LR YQLEG+NWL+F+W+N T
Sbjct: 990 ERPPTSDWQKSESSREYKNANALREYQLEGVNWLLFNWYN-------------------T 1030
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 1031 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1090
Query: 129 HATFVV--LLQTGSKFFRICLEFFVDAVFK 156
H + +Q ++R + +K
Sbjct: 1091 HGSQASRKTIQAYEMYYRDTQGRIIKGAYK 1120
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRR 194
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG +
Sbjct: 1050 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQ 1094
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ RSECF+VE+ LL +GWGRW + L++ F+ E VE + R L
Sbjct: 1653 YPRSECFRVEKNLLVYGWGRWGDILSHGRFKRPLRERDVETICRAL 1698
>gi|350594938|ref|XP_003484007.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like [Sus
scrofa]
Length = 804
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 144/214 (67%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDE
Sbjct: 399 SQISRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDE 456
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EF
Sbjct: 457 AHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEF 516
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NF
Sbjct: 517 GDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF 576
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFL+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 577 SFLTKGANQHNMPNLINTMMELRKCCNHPYLING 610
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 298 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 338
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 339 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 398
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 399 SQISRQMIQQYEMVYRDAQGNPLSGVFK 426
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 356 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 413
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 414 RDAQGNPLSG 423
>gi|348577591|ref|XP_003474567.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 8-like [Cavia porcellus]
Length = 2582
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P A+ W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQANAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1406 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1451
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1452 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|197251949|ref|NP_075222.2| chromodomain-helicase-DNA-binding protein 8 [Rattus norvegicus]
gi|226706290|sp|Q9JIX5.2|CHD8_RAT RecName: Full=Chromodomain-helicase-DNA-binding protein 8;
Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8;
AltName: Full=Axis duplication inhibitor; Short=Duplin
gi|149033674|gb|EDL88472.1| chromodomain helicase DNA binding protein 8, isoform CRA_a [Rattus
norvegicus]
Length = 2581
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P A+ W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQANAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1438 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|417515689|gb|JAA53657.1| chromodomain-helicase-DNA-binding protein 8 isoform 1 [Sus scrofa]
Length = 2583
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1438 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|149604227|ref|XP_001512847.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 2
[Ornithorhynchus anatinus]
Length = 2876
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NF+FL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG ANVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQANVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+E+S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNTWNKIEQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTDLNV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYH 939
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ V ++Q +FR + ++
Sbjct: 940 GSLVSRQMIQQYEMYFRDSQGRIIRGAYR 968
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTDLNV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHG 940
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E+ VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRAL 1535
>gi|148710305|gb|EDL42251.1| mCG18716, isoform CRA_b [Mus musculus]
Length = 2582
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 896 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 953
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 954 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1013
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1014 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1073
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1074 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1105
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P A+ W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 792 RPQANAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 832
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 833 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 892
Query: 130 ATFV 133
+
Sbjct: 893 GSLA 896
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 851 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 893
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1440 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1488
>gi|149604225|ref|XP_001512827.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
[Ornithorhynchus anatinus]
Length = 2885
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NF+FL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG ANVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQANVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+E+S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNTWNKIEQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTDLNV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYH 939
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ V ++Q +FR + ++
Sbjct: 940 GSLVSRQMIQQYEMYFRDSQGRIIRGAYR 968
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTDLNV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHG 940
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E+ VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRAL 1535
>gi|119392064|ref|NP_963999.2| chromodomain-helicase-DNA-binding protein 8 [Mus musculus]
gi|123778258|sp|Q09XV5.1|CHD8_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 8;
Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8;
AltName: Full=Axis duplication inhibitor; Short=Duplin
gi|77744590|gb|ABB02259.1| chromodomain helicase DNA binding protein 8 [Mus musculus]
Length = 2582
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 896 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 953
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 954 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1013
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1014 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1073
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1074 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1105
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P A+ W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 792 RPQANAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 832
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 833 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 892
Query: 130 ATFV 133
+
Sbjct: 893 GSLA 896
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 851 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 893
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1440 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1488
>gi|350586947|ref|XP_003482311.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8, partial [Sus
scrofa]
Length = 2567
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1438 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|426376290|ref|XP_004054937.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
[Gorilla gorilla gorilla]
Length = 2581
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1406 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1451
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1452 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|354491203|ref|XP_003507745.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like
[Cricetulus griseus]
Length = 2579
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1438 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|94707512|sp|Q8BYH8.2|CHD9_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 9;
Short=CHD-9; AltName: Full=ATP-dependent helicase CHD9;
AltName: Full=PPAR-alpha-interacting complex protein 320
kDa; AltName: Full=Peroxisomal proliferator-activated
receptor A-interacting complex 320 kDa protein
Length = 2885
Score = 308 bits (789), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL +WR IIDEAHR
Sbjct: 943 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIDWRCVIIDEAHR 1000
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1001 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1060
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1061 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1120
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1121 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1151
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+E+S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 838 RPPSNIWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 878
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 879 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 938
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 939 GSLISRQMIQQYEMYFRDSQGRIIRGAYR 967
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 897 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 939
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G + R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1487 GGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEVICRAL 1534
>gi|410223700|gb|JAA09069.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
gi|410249874|gb|JAA12904.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
gi|410338049|gb|JAA37971.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
Length = 2581
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1406 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1451
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1452 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|332841815|ref|XP_003314292.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Pan
troglodytes]
gi|410305114|gb|JAA31157.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
Length = 2581
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1406 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1451
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1452 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|126277336|ref|XP_001368949.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Monodelphis
domestica]
Length = 2591
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 893 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 950
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 951 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1010
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1011 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1070
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1071 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1102
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 81/124 (65%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 789 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 829
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ + GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 830 NCILADEMGLGKTIQSIAFLQEEYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 889
Query: 130 ATFV 133
+
Sbjct: 890 GSLA 893
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 33/43 (76%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 848 FLQEEYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 890
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1405 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1450
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1451 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1485
>gi|397466069|ref|XP_003804795.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 8 [Pan paniscus]
Length = 2581
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1406 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1451
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1452 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|297694660|ref|XP_002824590.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
[Pongo abelii]
Length = 2581
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1406 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1451
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1452 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|296483394|tpg|DAA25509.1| TPA: chromodomain helicase DNA binding protein 8 [Bos taurus]
Length = 2540
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 851 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 908
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 909 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 968
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 969 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1028
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1029 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1060
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 747 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 787
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 788 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 847
Query: 130 ATFV 133
+
Sbjct: 848 GSLA 851
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 806 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 848
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1395 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1443
>gi|402875590|ref|XP_003901583.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
[Papio anubis]
Length = 2581
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1406 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1451
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1452 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|383420319|gb|AFH33373.1| chromodomain-helicase-DNA-binding protein 8 isoform 1 [Macaca
mulatta]
Length = 2581
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1406 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1451
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1452 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|380783899|gb|AFE63825.1| chromodomain-helicase-DNA-binding protein 8 isoform 1 [Macaca
mulatta]
Length = 2581
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1406 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1451
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1452 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|441667219|ref|XP_003260841.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Nomascus
leucogenys]
Length = 2573
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1406 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1451
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1452 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|282165704|ref|NP_001164100.1| chromodomain-helicase-DNA-binding protein 8 isoform 1 [Homo sapiens]
gi|317373586|sp|Q9HCK8.5|CHD8_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 8;
Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8;
AltName: Full=Helicase with SNF2 domain 1
Length = 2581
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1406 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1451
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1452 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|410338051|gb|JAA37972.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
Length = 2589
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1406 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1451
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1452 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|395502992|ref|XP_003755857.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Sarcophilus
harrisii]
Length = 2594
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 896 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 953
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 954 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1013
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1014 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1073
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1074 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1105
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 81/124 (65%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 792 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 832
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ + GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 833 NCILADEMGLGKTIQSIAFLQEEYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 892
Query: 130 ATFV 133
+
Sbjct: 893 GSLA 896
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 33/43 (76%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 851 FLQEEYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 893
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1408 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1453
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1454 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1488
>gi|338717121|ref|XP_003363589.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2
[Equus caballus]
Length = 2583
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1438 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|68164076|gb|AAY87153.1| ciprofibrate bound protein p240 isoform PRIC320-2 [Homo sapiens]
Length = 1995
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 58 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 115
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 116 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 175
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ++LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 176 KTEEQVQKLQVILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 235
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 236 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 266
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVV-- 134
MGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH + +
Sbjct: 1 MGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQ 60
Query: 135 LLQTGSKFFR 144
++Q +FR
Sbjct: 61 MIQQYEMYFR 70
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 12 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 54
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 604 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 649
>gi|410961826|ref|XP_003987479.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 8 [Felis catus]
Length = 2594
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1438 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|426232816|ref|XP_004010416.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 8 [Ovis aries]
Length = 2583
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1438 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|47215569|emb|CAG10740.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3070
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 142/213 (66%), Positives = 176/213 (82%), Gaps = 2/213 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+ +YE+F+R+ + I + KFH LITTFE+I++DC EL+ +WR +IDEAHR
Sbjct: 359 SRQMILQYEMFYRDQQGNTIPS--VLKFHGLITTFEMIMADCPELRKLHWRCVVIDEAHR 416
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + F+ EFG L
Sbjct: 417 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPLQFPSESTFLEEFGDL 476
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KT+ +V KLQ +LKPMMLRRLK+DVEK++APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 477 KTDEQVKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 536
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNGKT 510
SKG N+PNL+NTMMELRKCC HPYL+ G
Sbjct: 537 SKGANQHNMPNLINTMMELRKCCNHPYLITGSA 569
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 85/124 (68%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP+ W KL+ S Y+N N LR YQLEG+NWL+F+W+N +
Sbjct: 254 RPPSEKWQKLDFSRDYRNGNELREYQLEGMNWLLFNWYN-------------------RK 294
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ +F GIRGPFL+IAPLSTI NW+REF WT +NVIVYH
Sbjct: 295 NCILADEMGLGKTIQSITFLYEIFNMGIRGPFLIIAPLSTITNWEREFRTWTHMNVIVYH 354
Query: 130 ATFV 133
+ +
Sbjct: 355 GSQI 358
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ +F GIRGPFL+IAPLSTI NW+REF WT +NVIVYHG ++SR+
Sbjct: 313 FLYEIFNMGIRGPFLIIAPLSTITNWEREFRTWTHMNVIVYHG--SQISRQ 361
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E +E + R L
Sbjct: 909 RAECFRVEKNLLIFGWGRWKDILNHGRFKWHLAERDMELICRAL 952
>gi|395861636|ref|XP_003803087.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Otolemur
garnettii]
Length = 2584
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1406 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1451
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1452 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|344252331|gb|EGW08435.1| Chromodomain-helicase-DNA-binding protein 8 [Cricetulus griseus]
Length = 2587
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1438 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|431898743|gb|ELK07120.1| Chromodomain-helicase-DNA-binding protein 8 [Pteropus alecto]
Length = 2582
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P A+ W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQANAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1438 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|301784895|ref|XP_002927862.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like
[Ailuropoda melanoleuca]
Length = 2583
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1438 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|77404417|ref|NP_796198.1| chromodomain-helicase-DNA-binding protein 9 [Mus musculus]
gi|76782010|gb|AAZ73184.2| ciprofibrate-bound protein PRIC320 [Mus musculus]
Length = 2869
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL +WR IIDEAHR
Sbjct: 943 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIDWRCVIIDEAHR 1000
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1001 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1060
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1061 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1120
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1121 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1151
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+E+S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 838 RPPSNIWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 878
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 879 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 938
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 939 GSLISRQMIQQYEMYFRDSQGRIIRGAYR 967
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 897 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 939
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G + R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1487 GGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEVICRAL 1534
>gi|395505940|ref|XP_003757294.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
[Sarcophilus harrisii]
Length = 2900
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 945 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1002
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1003 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSETTFMQEFGDL 1062
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NF+FL
Sbjct: 1063 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFL 1122
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG ANVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1123 SKGAGQANVPNLVNTMMELRKCCNHPYLIKG 1153
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 92/137 (67%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P + W K+E+S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 840 RPLPNTWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 880
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTDLNV+VYH
Sbjct: 881 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYH 940
Query: 130 ATFVV--LLQTGSKFFR 144
+ V ++Q +FR
Sbjct: 941 GSLVSRQMIQQYEMYFR 957
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTDLNV+VYHG
Sbjct: 899 FLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHG 941
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E LA+ F+ E+ VE + R L
Sbjct: 1491 YGRTECFRVEKNLLVYGWGRWREILAHGRFKRQLNEQDVEIICRAL 1536
>gi|345780979|ref|XP_532624.3| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
[Canis lupus familiaris]
Length = 2583
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1438 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|344305959|ref|XP_003421657.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 [Loxodonta
africana]
Length = 2581
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 893 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 950
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 951 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1010
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1011 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1070
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1071 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1102
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 789 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 829
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 830 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 889
Query: 130 ATFV 133
+
Sbjct: 890 GSLA 893
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 848 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 890
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1405 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1450
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1451 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1485
>gi|403264247|ref|XP_003924401.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
[Saimiri boliviensis boliviensis]
Length = 2581
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1406 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1451
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1452 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|296214425|ref|XP_002753816.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
[Callithrix jacchus]
Length = 2583
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1406 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1451
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1452 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>gi|440902098|gb|ELR52941.1| Chromodomain-helicase-DNA-binding protein 8 [Bos grunniens mutus]
Length = 2448
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 759 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 816
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 817 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 876
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 877 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 936
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 937 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 968
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 655 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 695
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 696 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 755
Query: 130 ATFV 133
+
Sbjct: 756 GSLA 759
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 714 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 756
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1303 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1351
>gi|34328020|dbj|BAB13390.3| KIAA1564 protein [Homo sapiens]
Length = 2432
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 745 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 802
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 803 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 862
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 863 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 922
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 923 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 954
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 641 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 681
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 682 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 741
Query: 130 ATFV 133
+
Sbjct: 742 GSLA 745
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 700 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 742
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1257 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1302
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1303 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1337
>gi|395505942|ref|XP_003757295.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 2
[Sarcophilus harrisii]
Length = 2884
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 945 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1002
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1003 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSETTFMQEFGDL 1062
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NF+FL
Sbjct: 1063 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFL 1122
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG ANVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1123 SKGAGQANVPNLVNTMMELRKCCNHPYLIKG 1153
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 92/137 (67%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P + W K+E+S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 840 RPLPNTWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 880
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTDLNV+VYH
Sbjct: 881 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYH 940
Query: 130 ATFVV--LLQTGSKFFR 144
+ V ++Q +FR
Sbjct: 941 GSLVSRQMIQQYEMYFR 957
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTDLNV+VYHG
Sbjct: 899 FLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHG 941
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E LA+ F+ E+ VE + R L
Sbjct: 1491 YGRTECFRVEKNLLVYGWGRWREILAHGRFKRQLNEQDVEIICRAL 1536
>gi|334311692|ref|XP_003339651.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9-like [Monodelphis domestica]
Length = 2881
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 943 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1000
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1001 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1060
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NF+FL
Sbjct: 1061 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFL 1120
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG ANVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1121 SKGAGQANVPNLVNTMMELRKCCNHPYLIKG 1151
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 92/137 (67%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP + W K+E S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 838 RPPPNTWKKIEHSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 878
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTDLNV+VYH
Sbjct: 879 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYH 938
Query: 130 ATFVV--LLQTGSKFFR 144
+ V ++Q +FR
Sbjct: 939 GSLVSRQMIQQYEMYFR 955
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTDLNV+VYHG
Sbjct: 897 FLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHG 939
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E LA+ F+ E VE + R L
Sbjct: 1489 YGRTECFRVEKNLLVYGWGRWREILAHGRFKRQLNEHDVEIICRAL 1534
>gi|355693101|gb|EHH27704.1| hypothetical protein EGK_17972 [Macaca mulatta]
Length = 2446
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 759 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 816
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 817 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 876
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 877 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 936
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 937 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 968
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 655 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 695
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 696 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 755
Query: 130 ATFV 133
+
Sbjct: 756 GSLA 759
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 714 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 756
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1271 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1316
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1317 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1351
>gi|355778379|gb|EHH63415.1| hypothetical protein EGM_16381 [Macaca fascicularis]
Length = 2446
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 759 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 816
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 817 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 876
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 877 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 936
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 937 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 968
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 655 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 695
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 696 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 755
Query: 130 ATFV 133
+
Sbjct: 756 GSLA 759
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 714 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 756
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1271 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1316
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1317 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1351
>gi|281340559|gb|EFB16143.1| hypothetical protein PANDA_017702 [Ailuropoda melanoleuca]
Length = 2448
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 759 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 816
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 817 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 876
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 877 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 936
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 937 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 968
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 655 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 695
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 696 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 755
Query: 130 ATFV 133
+
Sbjct: 756 GSLA 759
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 714 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 756
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1303 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1351
>gi|148679122|gb|EDL11069.1| mCG141427 [Mus musculus]
Length = 2699
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL +WR IIDEAHR
Sbjct: 943 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIDWRCVIIDEAHR 1000
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1001 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1060
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1061 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1120
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1121 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1151
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+E+S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 838 RPPSNIWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 878
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 879 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 938
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 939 GSLISRQMIQQYEMYFRDSQGRIIRGAYR 967
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 897 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 939
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G + R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1487 GGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEVICRAL 1534
>gi|395505944|ref|XP_003757296.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 3
[Sarcophilus harrisii]
Length = 2891
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 945 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1002
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1003 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSETTFMQEFGDL 1062
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NF+FL
Sbjct: 1063 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFL 1122
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG ANVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1123 SKGAGQANVPNLVNTMMELRKCCNHPYLIKG 1153
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 92/137 (67%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P + W K+E+S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 840 RPLPNTWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 880
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTDLNV+VYH
Sbjct: 881 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYH 940
Query: 130 ATFVV--LLQTGSKFFR 144
+ V ++Q +FR
Sbjct: 941 GSLVSRQMIQQYEMYFR 957
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTDLNV+VYHG
Sbjct: 899 FLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHG 941
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E LA+ F+ E+ VE + R L
Sbjct: 1491 YGRTECFRVEKNLLVYGWGRWREILAHGRFKRQLNEQDVEIICRAL 1536
>gi|351705244|gb|EHB08163.1| Chromodomain-helicase-DNA-binding protein 8 [Heterocephalus glaber]
Length = 2455
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 759 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 816
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 817 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 876
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 877 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 936
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 937 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 968
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P A+ W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 655 RPQANAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 695
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 696 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 755
Query: 130 ATFV 133
+
Sbjct: 756 GSLA 759
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 714 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 756
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 81/169 (47%), Gaps = 23/169 (13%)
Query: 122 DLNVIVYHATFVVLLQT---GSKFFRICLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQRE 178
D++ I+ T + +++ GS F + C F+ + + R + P + W ++
Sbjct: 1194 DIDQILLRRTTTITIESEGKGSTFAKACSNCFLASFVASENRTDISLDDP-NFWQKWAKK 1252
Query: 179 FEAWTDL-----NVIVYHGRRKKLSR-----RDKERLRLKYVAA--DYVPK----DGEVL 222
+ DL N+++ R +K +R +D + + + + D P+ D
Sbjct: 1253 ADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHA 1312
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
YG R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1313 YG---RTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1358
>gi|219518574|gb|AAI45220.1| Chd9 protein [Mus musculus]
Length = 2884
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL +WR IIDEAHR
Sbjct: 943 SRQMIQQYEMYFRDAQGRIIR--GAYRFQAIITTFEMILGGCGELNAIDWRCVIIDEAHR 1000
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1001 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1060
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1061 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1120
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1121 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1151
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+E+S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 838 RPPSNIWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 878
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 879 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 938
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 939 GSLISRQMIQQYEMYFRDAQGRIIRGAYR 967
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 897 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 939
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G + R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1487 GGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEVICRAL 1534
>gi|395505946|ref|XP_003757297.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 4
[Sarcophilus harrisii]
Length = 2875
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 945 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1002
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1003 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSETTFMQEFGDL 1062
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NF+FL
Sbjct: 1063 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFL 1122
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG ANVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1123 SKGAGQANVPNLVNTMMELRKCCNHPYLIKG 1153
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 92/137 (67%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P + W K+E+S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 840 RPLPNTWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 880
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTDLNV+VYH
Sbjct: 881 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYH 940
Query: 130 ATFVV--LLQTGSKFFR 144
+ V ++Q +FR
Sbjct: 941 GSLVSRQMIQQYEMYFR 957
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTDLNV+VYHG
Sbjct: 899 FLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHG 941
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E LA+ F+ E+ VE + R L
Sbjct: 1491 YGRTECFRVEKNLLVYGWGRWREILAHGRFKRQLNEQDVEIICRAL 1536
>gi|261860470|dbj|BAI46757.1| chromodomain helicase DNA binding protein 9 [synthetic construct]
Length = 2012
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 58 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 115
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 116 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 175
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 176 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 235
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 236 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 266
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVV-- 134
MGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH + +
Sbjct: 1 MGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQ 60
Query: 135 LLQTGSKFFR 144
++Q +FR
Sbjct: 61 MIQQYEMYFR 70
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 12 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 54
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 604 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 649
>gi|392334310|ref|XP_002725429.2| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
[Rattus norvegicus]
Length = 2883
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 943 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1000
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1001 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1060
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1061 KTEEQVQKLQAILKPMMLRRLKEDVEKRLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1120
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1121 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1151
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 838 RPPSNIWKKIDQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 878
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ V TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 879 NCILADEMGLGKTIQSITFLYEVLLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 938
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 939 GSLISRQMIQQYEMYFR 955
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 897 FLYEVLLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 939
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G + R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1487 GGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEVICRAL 1534
>gi|449472625|ref|XP_002193588.2| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Taeniopygia
guttata]
Length = 2889
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + ++ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 941 SRQMIQQYEMYFRDSQGRIVR--GTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHR 998
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F FM EFG L
Sbjct: 999 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDL 1058
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NF+FL
Sbjct: 1059 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFL 1118
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG ANVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1119 SKGAGQANVPNLVNTMMELRKCCNHPYLIKG 1149
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 96/149 (64%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP + W K+E+S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 836 RPPPNSWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 876
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTDLNV+VYH
Sbjct: 877 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYH 936
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR V ++
Sbjct: 937 GSMISRQMIQQYEMYFRDSQGRIVRGTYR 965
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTDLNV+VYHG
Sbjct: 895 FLYEILLTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHG 937
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E+ VE + R L
Sbjct: 1487 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRAL 1532
>gi|392354899|ref|XP_002728634.2| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Rattus
norvegicus]
Length = 2778
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 943 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1000
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1001 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1060
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1061 KTEEQVQKLQAILKPMMLRRLKEDVEKRLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1120
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1121 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1151
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 838 RPPSNIWKKIDQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 878
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ V TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 879 NCILADEMGLGKTIQSITFLYEVLLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 938
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 939 GSLISRQMIQQYEMYFRDSQGRIIRGAYR 967
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 897 FLYEVLLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 939
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G + R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1487 GGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEVICRAL 1534
>gi|320461545|ref|NP_001189381.1| chromodomain-helicase-DNA-binding protein 8 [Danio rerio]
Length = 2549
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 177/213 (83%), Gaps = 3/213 (1%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++DK I YKF LITTFE+I+SDC EL++ +WR +IDEAH
Sbjct: 968 ASRQMIQQYEMYCKDDKGHLIP--GAYKFDALITTFEMILSDCPELREISWRCVVIDEAH 1025
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L++L +EH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ EFG
Sbjct: 1026 RLKNRNCKLLDSLKMLEIEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLREFGD 1085
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELT++QKKYYR ILERNFSF
Sbjct: 1086 LKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSF 1145
Query: 477 LSKGTT-SANVPNLMNTMMELRKCCIHPYLLNG 508
LS G T ++NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1146 LSMGATQNSNVPNLLNTMMELRKCCNHPYLITG 1178
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KL++S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 864 RPAASAWKKLDESTEYKNGNQLREYQLEGVNWLLFNWYN-------------------RQ 904
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ + +F G++ PF++IAPLSTI NW+REF WTD+N IVYH
Sbjct: 905 NCILADEMGLGKTIQSIALLSEMFSAGVQSPFMIIAPLSTITNWEREFSNWTDMNAIVYH 964
Query: 130 ATFV 133
+
Sbjct: 965 GSLA 968
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
+F G++ PF++IAPLSTI NW+REF WTD+N IVYHG
Sbjct: 927 MFSAGVQSPFMIIAPLSTITNWEREFSNWTDMNAIVYHG 965
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G + R++CF+VE+ LL +GWGRW++ L++ + +E VE + R++
Sbjct: 1520 GGYGRTDCFRVEKHLLVYGWGRWRDILSHARCKRRLSERDVETICRVI 1567
>gi|426382181|ref|XP_004057693.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like
[Gorilla gorilla gorilla]
Length = 1997
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 58 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 115
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 116 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 175
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 176 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 235
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 236 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 266
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVV-- 134
MGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH + +
Sbjct: 1 MGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQ 60
Query: 135 LLQTGSKFFR 144
++Q +FR
Sbjct: 61 MIQQYEMYFR 70
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 12 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 54
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 604 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 649
>gi|327276403|ref|XP_003222959.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like isoform 2
[Anolis carolinensis]
Length = 2876
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ YKF +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 940 SRQMIQQYEMYFRDSQGRIIR--GTYKFQAIITTFEMILGGCPELNAIEWRCIIIDEAHR 997
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F FM EFG L
Sbjct: 998 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDL 1057
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APK+ET++EVELTNIQKKYYR ILE+NF+FL
Sbjct: 1058 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKQETIIEVELTNIQKKYYRAILEKNFAFL 1117
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG ANVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1118 SKGAGQANVPNLVNTMMELRKCCNHPYLIKG 1148
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 97/150 (64%), Gaps = 21/150 (14%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PP + W K+E+S YKN N LR YQLEGLNWL+F+W+N
Sbjct: 834 ERPPPNSWKKIEQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------R 874
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
+NCILADEMGLGKTIQS+TF+ + TGI+GPFL+IAPLSTI NW+REF WTDLNV+VY
Sbjct: 875 QNCILADEMGLGKTIQSITFLFEILLTGIKGPFLIIAPLSTIANWEREFRTWTDLNVVVY 934
Query: 129 HATFVV--LLQTGSKFFRICLEFFVDAVFK 156
H + + ++Q +FR + +K
Sbjct: 935 HGSMISRQMIQQYEMYFRDSQGRIIRGTYK 964
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGI+GPFL+IAPLSTI NW+REF WTDLNV+VYHG
Sbjct: 894 FLFEILLTGIKGPFLIIAPLSTIANWEREFRTWTDLNVVVYHG 936
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E+ VE + R L
Sbjct: 1486 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRAL 1531
>gi|119603201|gb|EAW82795.1| chromodomain helicase DNA binding protein 9, isoform CRA_c [Homo
sapiens]
Length = 2349
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 412 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 469
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 470 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 529
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 530 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 589
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 590 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 620
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 307 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 347
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 348 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 407
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 408 GSLISRQMIQQYEMYFRDSQGRIIRGAYR 436
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 366 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 408
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 958 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1003
>gi|197246330|gb|AAI68549.1| Unknown (protein for MGC:184754) [Xenopus (Silurana) tropicalis]
Length = 2179
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 175/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ K + I YKF LITTFE+++SDC EL++ WR IIDEAH
Sbjct: 833 ASRQMIQQYEMYCKDSKGRLIP--GAYKFDALITTFEMVLSDCPELREIEWRCVIIDEAH 890
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QFS+ F+ +FG
Sbjct: 891 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTQFSSEAEFLKDFGD 950
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 951 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1010
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L+KG + +N PNL+NTMMELRKCC HPYL+ G
Sbjct: 1011 LTKGASQSNTPNLLNTMMELRKCCNHPYLITG 1042
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 84/124 (67%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P A+ W KLE S Y+N N LR YQLEG+NWL+F+W+N +
Sbjct: 729 RPAATSWKKLELSREYQNGNQLREYQLEGVNWLLFNWYN-------------------RQ 769
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ V+ GIRGPFLVIAPLSTI NW+REF +WT +N IVYH
Sbjct: 770 NCILADEMGLGKTIQSITFLQEVYNVGIRGPFLVIAPLSTITNWEREFGSWTQMNTIVYH 829
Query: 130 ATFV 133
+
Sbjct: 830 GSLA 833
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GIRGPFLVIAPLSTI NW+REF +WT +N IVYHG
Sbjct: 788 FLQEVYNVGIRGPFLVIAPLSTITNWEREFGSWTQMNTIVYHG 830
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 225 NWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R++CF+VE+ LL +GWGRW++ L + F+ G E VE++ R +
Sbjct: 1379 GYGRTDCFRVEKHLLVYGWGRWRDILTHGRFKRGMNERDVEKICRAI 1425
>gi|149032671|gb|EDL87541.1| rCG44314 [Rattus norvegicus]
Length = 2698
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 943 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1000
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1001 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1060
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1061 KTEEQVQKLQAILKPMMLRRLKEDVEKRLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1120
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1121 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1151
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 838 RPPSNIWKKIDQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 878
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ V TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 879 NCILADEMGLGKTIQSITFLYEVLLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 938
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 939 GSLISRQMIQQYEMYFR 955
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 897 FLYEVLLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 939
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G + R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1487 GGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEVICRAL 1534
>gi|327276401|ref|XP_003222958.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like isoform 1
[Anolis carolinensis]
Length = 2892
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ YKF +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 940 SRQMIQQYEMYFRDSQGRIIR--GTYKFQAIITTFEMILGGCPELNAIEWRCIIIDEAHR 997
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F FM EFG L
Sbjct: 998 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDL 1057
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APK+ET++EVELTNIQKKYYR ILE+NF+FL
Sbjct: 1058 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKQETIIEVELTNIQKKYYRAILEKNFAFL 1117
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG ANVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1118 SKGAGQANVPNLVNTMMELRKCCNHPYLIKG 1148
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 97/150 (64%), Gaps = 21/150 (14%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PP + W K+E+S YKN N LR YQLEGLNWL+F+W+N
Sbjct: 834 ERPPPNSWKKIEQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------R 874
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
+NCILADEMGLGKTIQS+TF+ + TGI+GPFL+IAPLSTI NW+REF WTDLNV+VY
Sbjct: 875 QNCILADEMGLGKTIQSITFLFEILLTGIKGPFLIIAPLSTIANWEREFRTWTDLNVVVY 934
Query: 129 HATFVV--LLQTGSKFFRICLEFFVDAVFK 156
H + + ++Q +FR + +K
Sbjct: 935 HGSMISRQMIQQYEMYFRDSQGRIIRGTYK 964
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGI+GPFL+IAPLSTI NW+REF WTDLNV+VYHG
Sbjct: 894 FLFEILLTGIKGPFLIIAPLSTIANWEREFRTWTDLNVVVYHG 936
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E+ VE + R L
Sbjct: 1486 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRAL 1531
>gi|350529335|ref|NP_001131089.2| chromodomain-helicase-DNA-binding protein 8 [Xenopus (Silurana)
tropicalis]
gi|226706291|sp|B5DE69.2|CHD8_XENTR RecName: Full=Chromodomain-helicase-DNA-binding protein 8;
Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8
Length = 2184
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 175/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ K + I YKF LITTFE+++SDC EL++ WR IIDEAH
Sbjct: 838 ASRQMIQQYEMYCKDSKGRLIP--GAYKFDALITTFEMVLSDCPELREIEWRCVIIDEAH 895
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QFS+ F+ +FG
Sbjct: 896 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTQFSSEAEFLKDFGD 955
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 956 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1015
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L+KG + +N PNL+NTMMELRKCC HPYL+ G
Sbjct: 1016 LTKGASQSNTPNLLNTMMELRKCCNHPYLITG 1047
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 84/124 (67%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P A+ W KLE S Y+N N LR YQLEG+NWL+F+W+N +
Sbjct: 734 RPAATSWKKLELSREYQNGNQLREYQLEGVNWLLFNWYN-------------------RQ 774
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ V+ GIRGPFLVIAPLSTI NW+REF +WT +N IVYH
Sbjct: 775 NCILADEMGLGKTIQSITFLQEVYNVGIRGPFLVIAPLSTITNWEREFGSWTQMNTIVYH 834
Query: 130 ATFV 133
+
Sbjct: 835 GSLA 838
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GIRGPFLVIAPLSTI NW+REF +WT +N IVYHG
Sbjct: 793 FLQEVYNVGIRGPFLVIAPLSTITNWEREFGSWTQMNTIVYHG 835
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 225 NWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R++CF+VE+ LL +GWGRW++ L + F+ G E VE++ R +
Sbjct: 1384 GYGRTDCFRVEKHLLVYGWGRWRDILTHGRFKRGMNERDVEKICRAI 1430
>gi|87130801|gb|ABD24032.1| PRIC320 isoform 1 [Homo sapiens]
Length = 2881
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ++LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQVILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 940 GSLISRQMIQQYEMYFRDSQGRIIRGAYR 968
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|397502864|ref|XP_003846159.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9 [Pan paniscus]
Length = 2425
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 470 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 527
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 528 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 587
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 588 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 647
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 648 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 678
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 365 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 405
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 406 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 465
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 466 GSLISRQMIQQYEMYFRDSQGRIIRGAYR 494
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 424 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 466
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1016 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1061
>gi|340377289|ref|XP_003387162.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like
[Amphimedon queenslandica]
Length = 1906
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/214 (66%), Positives = 180/214 (84%), Gaps = 4/214 (1%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ SR M+QEYEL+FR+ + I D YKF+V++TT+E+++SD ELK+ WR IIDE
Sbjct: 1082 SAYSRRMIQEYELYFRDQSGKIII--DAYKFNVIVTTYEVLLSDNSELKNILWRAVIIDE 1139
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN+NCK+LEGLR LH+EHRVLL+GTPLQN+V+ELFSLLNFLEP QF + + F+ +F
Sbjct: 1140 AHRLKNKNCKMLEGLRELHMEHRVLLTGTPLQNSVDELFSLLNFLEPSQFPSLQLFLQQF 1199
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V +LQ +LKPMMLRRLKEDVEKS+APKEET++E+ELT IQK+YYR ILERNF
Sbjct: 1200 GDLKTEEQVEELQTVLKPMMLRRLKEDVEKSLAPKEETIIEIELTAIQKQYYRAILERNF 1259
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FL+KG S VPNL+NTMMELRKCC HP+L+ G
Sbjct: 1260 TFLTKG--SNTVPNLLNTMMELRKCCNHPFLIAG 1291
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 83/123 (67%), Gaps = 19/123 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PP + + +++S YK DN LR YQLEGLNWL+F+W+
Sbjct: 979 RRPPPNRFKPIKESSHYKGDNLLRPYQLEGLNWLLFNWYT-------------------R 1019
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
+NCILADEMGLGKT+QS+ + + GIRGPFLVIAPLSTI NWQREFE W++LNVI+Y
Sbjct: 1020 QNCILADEMGLGKTVQSIALILEIIDAGIRGPFLVIAPLSTISNWQREFETWSNLNVIIY 1079
Query: 129 HAT 131
H +
Sbjct: 1080 HGS 1082
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/47 (70%), Positives = 37/47 (78%), Gaps = 2/47 (4%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
+ GIRGPFLVIAPLSTI NWQREFE W++LNVI+YHG SRR
Sbjct: 1043 IIDAGIRGPFLVIAPLSTISNWQREFETWSNLNVIIYHG--SAYSRR 1087
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 213 DYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEFR 256
D +P G+ W++ ECFK+E+ LL +GWG+W + LA F+
Sbjct: 1608 DILPSRGK---KGWTKLECFKIEKALLVYGWGQWVDILAGCNFK 1648
>gi|226706292|sp|B0R0I6.2|CHD8_DANRE RecName: Full=Chromodomain-helicase-DNA-binding protein 8;
Short=CHD-8; AltName: Full=ATP-dependent helicase CHD8
Length = 2511
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 177/213 (83%), Gaps = 3/213 (1%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++DK I YKF LITTFE+I+SDC EL++ +WR +IDEAH
Sbjct: 930 ASRQMIQQYEMYCKDDKGHLIP--GAYKFDALITTFEMILSDCPELREISWRCVVIDEAH 987
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L++L +EH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ EFG
Sbjct: 988 RLKNRNCKLLDSLKMLEIEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLREFGD 1047
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELT++QKKYYR ILERNFSF
Sbjct: 1048 LKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSF 1107
Query: 477 LSKGTT-SANVPNLMNTMMELRKCCIHPYLLNG 508
LS G T ++NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1108 LSMGATQNSNVPNLLNTMMELRKCCNHPYLITG 1140
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KL++S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 826 RPAASAWKKLDESTEYKNGNQLREYQLEGVNWLLFNWYN-------------------RQ 866
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ + +F G++ PF++IAPLSTI NW+REF WTD+N IVYH
Sbjct: 867 NCILADEMGLGKTIQSIALLSEMFSAGVQSPFMIIAPLSTITNWEREFSNWTDMNAIVYH 926
Query: 130 ATFV 133
+
Sbjct: 927 GSLA 930
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
+F G++ PF++IAPLSTI NW+REF WTD+N IVYHG
Sbjct: 889 MFSAGVQSPFMIIAPLSTITNWEREFSNWTDMNAIVYHG 927
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G + R++CF+VE+ LL +GWGRW++ L++ + +E VE + R++
Sbjct: 1482 GGYGRTDCFRVEKHLLVYGWGRWRDILSHARCKRRLSERDVETICRVI 1529
>gi|327285131|ref|XP_003227288.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like [Anolis
carolinensis]
Length = 2471
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 175/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 873 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 930
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 931 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 990
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NF+F
Sbjct: 991 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFNF 1050
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG +N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1051 LSKGAGHSNMPNLLNTMMELRKCCNHPYLING 1082
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P A W KLE + YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 769 RPQAGSWKKLELTHEYKNGNQLREYQLEGVNWLLFNWYN-------------------RQ 809
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GIRGPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 810 NCILADEMGLGKTIQSIAFLQEVYNMGIRGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 869
Query: 130 ATFV 133
+
Sbjct: 870 GSLA 873
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GIRGPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 828 FLQEVYNMGIRGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 870
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 225 NWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++ R++CF+VE+ LL +GWGRW+E L++ F+ ++ VE + R +
Sbjct: 1425 SYGRTDCFQVEKQLLVYGWGRWREILSHGRFKRRMSDRDVETICRAI 1471
>gi|410928769|ref|XP_003977772.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like [Takifugu
rubripes]
Length = 2526
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 177/213 (83%), Gaps = 3/213 (1%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ +++K+ I YKF LITTFE+I+SDC EL++ +WR IIDEAH
Sbjct: 966 ASRQMIQQYEMYCKDEKDHLIP--GAYKFDALITTFEMILSDCPELREISWRCVIIDEAH 1023
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+++ EH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ EFG
Sbjct: 1024 RLKNRNCKLLDSLKMMDQEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLREFGD 1083
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELT+IQKKYYR ILERNFSF
Sbjct: 1084 LKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDIQKKYYRAILERNFSF 1143
Query: 477 LSKGTTS-ANVPNLMNTMMELRKCCIHPYLLNG 508
LS G S +NVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1144 LSLGANSNSNVPNLLNTMMELRKCCNHPYLING 1176
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 83/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P S W KLE+S YKN NTLR YQLEG+NWL+F+W+N +
Sbjct: 862 RPSPSSWKKLEESREYKNANTLREYQLEGVNWLLFNWYN-------------------RQ 902
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+T + ++ I+GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 903 NCILADEMGLGKTIQSITLLSEIYAANIQGPFLVIAPLSTITNWEREFATWTNMNAIVYH 962
Query: 130 ATFV 133
+
Sbjct: 963 GSLA 966
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 32/39 (82%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
++ I+GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 925 IYAANIQGPFLVIAPLSTITNWEREFATWTNMNAIVYHG 963
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G + R++CF+VE+ LL +GWGRW++ L++ + +E VE + R++
Sbjct: 1518 GGYGRTDCFRVEKHLLVYGWGRWRDILSHARCKRRLSERDVETICRVI 1565
>gi|296214427|ref|XP_002753817.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2
[Callithrix jacchus]
Length = 2304
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 615 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 672
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 673 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 732
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 733 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 792
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 793 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 824
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 511 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 551
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 552 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 611
Query: 130 ATFV 133
+
Sbjct: 612 GSLA 615
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 570 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 612
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1127 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1172
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1173 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1207
>gi|354471657|ref|XP_003498057.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Cricetulus
griseus]
Length = 2864
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 945 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1002
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1003 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1062
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1063 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1122
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1123 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1153
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 840 RPPSNIWKKIDQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 880
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 881 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 940
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 941 GSLISRQMIQQYEMYFR 957
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 899 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 941
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E+ VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRAL 1535
>gi|402908369|ref|XP_003916918.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
[Papio anubis]
Length = 2901
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|338723330|ref|XP_001915417.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9-like [Equus caballus]
Length = 2826
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 946 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1003
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1004 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1063
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1064 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1123
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1124 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1154
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 841 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 881
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 882 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 941
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 942 GSLISRQMIQQYEMYFR 958
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 900 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 942
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1458 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1503
>gi|281346617|gb|EFB22201.1| hypothetical protein PANDA_000001 [Ailuropoda melanoleuca]
Length = 2901
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 946 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1003
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1004 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1063
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1064 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1123
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1124 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1154
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PPA+ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 841 RPPANIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 881
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 882 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 941
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 942 GSLISRQMIQQYEMYFRDSQGRIIRGAYR 970
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 900 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 942
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1492 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1537
>gi|344235901|gb|EGV92004.1| Chromodomain-helicase-DNA-binding protein 9 [Cricetulus griseus]
Length = 2271
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 314 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 371
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 372 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 431
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 432 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 491
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 492 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 522
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 209 RPPSNIWKKIDQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 249
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 250 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 309
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 310 GSLISRQMIQQYEMYFR 326
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 268 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 310
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E+ VE + R L
Sbjct: 859 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRAL 904
>gi|403264249|ref|XP_003924402.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2
[Saimiri boliviensis boliviensis]
Length = 2302
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 615 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 672
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 673 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 732
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 733 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 792
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 793 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 824
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 511 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 551
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 552 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 611
Query: 130 ATFV 133
+
Sbjct: 612 GSLA 615
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 570 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 612
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1127 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1172
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1173 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1207
>gi|402908371|ref|XP_003916919.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 2
[Papio anubis]
Length = 2885
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|301752864|ref|XP_002912282.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like
[Ailuropoda melanoleuca]
Length = 2885
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 946 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1003
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1004 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1063
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1064 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1123
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1124 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1154
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PPA+ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 841 RPPANIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 881
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 882 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 941
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 942 GSLISRQMIQQYEMYFRDSQGRIIRGAYR 970
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 900 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 942
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1492 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1537
>gi|297283992|ref|XP_002808345.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9-like [Macaca mulatta]
Length = 2901
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|426242344|ref|XP_004015033.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
[Ovis aries]
Length = 2899
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 945 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1002
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1003 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1062
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1063 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1122
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1123 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1153
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 93/137 (67%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP + W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 840 RPPPNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 880
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 881 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 940
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 941 GSLISRQMIQQYEMYFR 957
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 899 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 941
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1491 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1536
>gi|395839421|ref|XP_003792588.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Otolemur
garnettii]
Length = 2898
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP+S W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSSIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|355710194|gb|EHH31658.1| Chromodomain-helicase-DNA-binding protein 9 [Macaca mulatta]
Length = 2901
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|33641444|gb|AAQ24287.1| chromatin remodeling factor CHROM1 [Homo sapiens]
gi|219521584|gb|AAI44623.1| CHD9 protein [Homo sapiens]
Length = 2897
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|440910037|gb|ELR59871.1| Chromodomain-helicase-DNA-binding protein 9 [Bos grunniens mutus]
Length = 2906
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 945 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1002
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1003 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1062
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1063 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1122
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1123 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1153
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 93/137 (67%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP + W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 840 RPPPNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 880
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 881 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 940
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 941 GSLISRQMIQQYEMYFR 957
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 899 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 941
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1491 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1536
>gi|344289261|ref|XP_003416363.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9-like [Loxodonta africana]
Length = 2887
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 947 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1004
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1005 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1064
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1065 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1124
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1125 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1155
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 842 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 882
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 883 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 942
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ V ++Q +FR + ++
Sbjct: 943 GSLVSRQMIQQYEMYFRDSQGRIIRGAYR 971
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 901 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 943
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1493 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1538
>gi|215273951|sp|Q3L8U1.2|CHD9_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 9;
Short=CHD-9; AltName: Full=ATP-dependent helicase CHD9;
AltName: Full=Chromatin-related mesenchymal modulator;
Short=CReMM; AltName: Full=Chromatin-remodeling factor
CHROM1; AltName: Full=Kismet homolog 2; AltName:
Full=PPAR-alpha-interacting complex protein 320 kDa;
AltName: Full=Peroxisomal proliferator-activated receptor
A-interacting complex 320 kDa protein
gi|187954623|gb|AAI40816.1| CHD9 protein [Homo sapiens]
Length = 2897
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|410983505|ref|XP_003998079.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9 [Felis catus]
Length = 2885
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 946 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1003
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1004 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1063
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1064 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1123
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1124 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1154
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PPA+ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 841 RPPANIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 881
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 882 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 941
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 942 GSLISRQMIQQYEMYFRDSQGRIIRGAYR 970
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 900 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 942
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1492 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1537
>gi|297698733|ref|XP_002826464.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9 [Pongo abelii]
Length = 2898
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|426242346|ref|XP_004015034.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 2
[Ovis aries]
Length = 2883
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 945 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1002
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1003 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1062
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1063 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1122
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1123 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1153
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 93/137 (67%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP + W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 840 RPPPNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 880
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 881 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 940
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 941 GSLISRQMIQQYEMYFR 957
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 899 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 941
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1491 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1536
>gi|71891786|dbj|BAA20767.3| KIAA0308 [Homo sapiens]
Length = 2759
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 821 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 878
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 879 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 938
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 939 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 998
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 999 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1029
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 716 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 756
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 757 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 816
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 817 GSLISRQMIQQYEMYFRDSQGRIIRGAYR 845
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 775 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 817
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1367 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1412
>gi|345794276|ref|XP_535304.3| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 1
[Canis lupus familiaris]
Length = 2886
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 946 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1003
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1004 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1063
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1064 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1123
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1124 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1154
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PPA+ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 841 RPPANIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 881
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 882 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 941
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 942 GSLISRQMIQQYEMYFRDSQGRIIRGAYR 970
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 900 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 942
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1492 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1537
>gi|329663886|ref|NP_001192579.1| chromodomain-helicase-DNA-binding protein 9 [Bos taurus]
gi|296478067|tpg|DAA20182.1| TPA: kismet-like [Bos taurus]
Length = 2883
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 945 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1002
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1003 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1062
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1063 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1122
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1123 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1153
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 93/137 (67%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP + W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 840 RPPPNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 880
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 881 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 940
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 941 GSLISRQMIQQYEMYFR 957
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 899 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 941
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1491 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1536
>gi|26383564|dbj|BAC25543.1| unnamed protein product [Mus musculus]
Length = 561
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/214 (66%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ SR M+Q+YE+ +R+ + + ++KFHV++TTFE+I++DC ELK +W IIDE
Sbjct: 208 SQISRQMIQQYEMVYRDAQGNPLS--GVFKFHVVLTTFEMILADCPELKKIHWSCVIIDE 265
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EF
Sbjct: 266 AHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEF 325
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NF
Sbjct: 326 GDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF 385
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFL+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 386 SFLTKGANQHNMPNLINTMMELRKCCNHPYLING 419
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 91/148 (61%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLE S Y+N N LR YQLEG+NWL+F+W+N +N
Sbjct: 107 PASDAWQKLETSREYRNSNRLREYQLEGMNWLLFNWYN-------------------RKN 147
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEM LGKTIQS+ F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 148 CILADEMDLGKTIQSIAFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 207
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 208 SQISRQMIQQYEMVYRDAQGNPLSGVFK 235
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 165 FLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 222
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 223 RDAQGNPLSG 232
>gi|328802689|ref|NP_001179063.1| chromodomain-helicase-DNA-binding protein 8 [Bos taurus]
Length = 2303
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 615 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 672
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 673 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 732
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 733 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 792
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 793 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 824
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 511 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 551
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 552 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 611
Query: 130 ATFV 133
+
Sbjct: 612 GSLA 615
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 570 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 612
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1159 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1207
>gi|119603203|gb|EAW82797.1| chromodomain helicase DNA binding protein 9, isoform CRA_e [Homo
sapiens]
Length = 2823
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 886 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 943
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 944 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1003
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1004 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1063
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1064 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1094
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 781 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 821
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 822 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 881
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 882 GSLISRQMIQQYEMYFRDSQGRIIRGAYR 910
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 840 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 882
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1432 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1477
>gi|402875592|ref|XP_003901584.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2
[Papio anubis]
Length = 2302
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 615 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 672
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 673 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 732
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 733 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 792
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 793 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 824
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 511 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 551
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 552 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 611
Query: 130 ATFV 133
+
Sbjct: 612 GSLA 615
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 570 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 612
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1127 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1172
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1173 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1207
>gi|297297436|ref|XP_001096619.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8-like [Macaca
mulatta]
Length = 2301
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 615 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 672
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 673 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 732
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 733 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 792
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 793 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 824
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 511 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 551
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 552 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 611
Query: 130 ATFV 133
+
Sbjct: 612 GSLA 615
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 570 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 612
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1127 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1172
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1173 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1207
>gi|355757747|gb|EHH61272.1| Chromodomain-helicase-DNA-binding protein 9 [Macaca fascicularis]
Length = 2833
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 868 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 925
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 926 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 985
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 986 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1045
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1046 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1076
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 763 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 803
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 804 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 863
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 864 GSLISRQMIQQYEMYFR 880
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 822 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 864
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1414 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1459
>gi|114662481|ref|XP_510966.2| PREDICTED: chromodomain-helicase-DNA-binding protein 9 isoform 5 [Pan
troglodytes]
gi|410050324|ref|XP_003952892.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Pan
troglodytes]
gi|410303510|gb|JAA30355.1| chromodomain helicase DNA binding protein 9 [Pan troglodytes]
Length = 2882
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|332841817|ref|XP_001153522.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 3
[Pan troglodytes]
gi|426376292|ref|XP_004054938.1| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 2
[Gorilla gorilla gorilla]
gi|410338053|gb|JAA37973.1| chromodomain helicase DNA binding protein 8 [Pan troglodytes]
Length = 2302
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 615 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 672
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 673 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 732
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 733 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 792
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 793 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 824
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 511 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 551
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 552 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 611
Query: 130 ATFV 133
+
Sbjct: 612 GSLA 615
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 570 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 612
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1127 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1172
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1173 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1207
>gi|114326455|ref|NP_065971.2| chromodomain-helicase-DNA-binding protein 8 isoform 2 [Homo
sapiens]
gi|225356486|gb|AAI56440.1| Chromodomain helicase DNA binding protein 8 [synthetic construct]
Length = 2302
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 615 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 672
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 673 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 732
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 733 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 792
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 793 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 824
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 511 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 551
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 552 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 611
Query: 130 ATFV 133
+
Sbjct: 612 GSLA 615
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 570 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 612
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1127 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1172
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1173 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1207
>gi|95147342|ref|NP_079410.4| chromodomain-helicase-DNA-binding protein 9 [Homo sapiens]
Length = 2881
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 940 GSLISRQMIQQYEMYFRDSQGRIIRGAYR 968
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|410343035|gb|JAA40464.1| chromodomain helicase DNA binding protein 9 [Pan troglodytes]
Length = 2883
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|410225536|gb|JAA09987.1| chromodomain helicase DNA binding protein 9 [Pan troglodytes]
Length = 2883
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|403292582|ref|XP_003937317.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Saimiri
boliviensis boliviensis]
Length = 2898
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 93/136 (68%), Gaps = 21/136 (15%)
Query: 11 PPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N RN
Sbjct: 840 PPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RRN 880
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 881 CILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Query: 131 TFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 941 SLISRQMIQQYEMYFR 956
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|338717123|ref|XP_001918380.2| PREDICTED: chromodomain-helicase-DNA-binding protein 8 isoform 1
[Equus caballus]
Length = 2304
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 615 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 672
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 673 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 732
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 733 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 792
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 793 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 824
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 511 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 551
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 552 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 611
Query: 130 ATFV 133
+
Sbjct: 612 GSLA 615
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 570 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 612
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1159 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1207
>gi|296231077|ref|XP_002807783.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9-like [Callithrix jacchus]
Length = 2896
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWNKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|119603200|gb|EAW82794.1| chromodomain helicase DNA binding protein 9, isoform CRA_b [Homo
sapiens]
Length = 2785
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|410261570|gb|JAA18751.1| chromodomain helicase DNA binding protein 9 [Pan troglodytes]
Length = 2883
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|326669481|ref|XP_001922536.3| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like [Danio
rerio]
Length = 2485
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 171/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR MLQ+YE++ R+ + + I+ Y+F +ITTFE+I+ C EL +WR IIDEAHR
Sbjct: 541 SRQMLQQYEMYCRDSQGRVIR--GAYRFQAVITTFEMILGGCPELNAIDWRCVIIDEAHR 598
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEG +L+ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 599 LKNKNCKLLEGFKLMSLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSENTFMQEFGDL 658
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 659 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 718
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG ANVPNL+NTMMELRKCC HPYL+ G
Sbjct: 719 AKGAGQANVPNLLNTMMELRKCCNHPYLIKG 749
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 92/125 (73%), Gaps = 19/125 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPAS W KLEKS Y N+N+LR YQLEG+NWL+F+W+N
Sbjct: 435 ERPPASHWKKLEKSRKYCNENSLRDYQLEGVNWLLFNWYN-------------------R 475
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF++ +++TGI+GPFL+IAPLSTI NW+REF WT LNVIVY
Sbjct: 476 RNCILADEMGLGKTIQSITFLEEIYRTGIKGPFLIIAPLSTIANWEREFRTWTHLNVIVY 535
Query: 129 HATFV 133
H + V
Sbjct: 536 HGSVV 540
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 38/43 (88%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F++ +++TGI+GPFL+IAPLSTI NW+REF WT LNVIVYHG
Sbjct: 495 FLEEIYRTGIKGPFLIIAPLSTIANWEREFRTWTHLNVIVYHG 537
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 225 NWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++ R+ECF+VE+ LL +GWGRWK+ LA+ F+ +E VE + R L
Sbjct: 1083 SYGRTECFRVEKNLLVYGWGRWKDILAHGRFKRQLSERDVEWICRAL 1129
>gi|444525654|gb|ELV14122.1| Chromodomain-helicase-DNA-binding protein 8 [Tupaia chinensis]
Length = 2589
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 173/212 (81%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 962 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 1019
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 1020 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1079
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ + KPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1080 LKTEEQVQKLQAIPKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1139
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1140 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1171
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 858 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 898
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 899 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 958
Query: 130 ATFV 133
+
Sbjct: 959 GSLA 962
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 917 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 959
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1474 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1519
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1520 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1554
>gi|441597794|ref|XP_003263031.2| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Nomascus
leucogenys]
Length = 2612
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|10434055|dbj|BAB14112.1| unnamed protein product [Homo sapiens]
Length = 730
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 58 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 115
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 116 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 175
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ++LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 176 KTEEQVQKLQVILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 235
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 236 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 266
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVV-- 134
MGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH + +
Sbjct: 1 MGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQ 60
Query: 135 LLQTGSKFFR 144
++Q +FR
Sbjct: 61 MIQQYEMYFR 70
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 12 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 54
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 225 NWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 603 GYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 649
>gi|194386618|dbj|BAG61119.1| unnamed protein product [Homo sapiens]
Length = 1108
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 470 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 527
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 528 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 587
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 588 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 647
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 648 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 678
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 365 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 405
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 406 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 465
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 466 GSLISRQMIQQYEMYFR 482
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 424 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 466
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1016 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1061
>gi|431914122|gb|ELK15381.1| Chromodomain-helicase-DNA-binding protein 9 [Pteropus alecto]
Length = 2885
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 170/211 (80%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q YE++FR+ + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 946 SRQMIQRYEMYFRDSQGHIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1003
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1004 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1063
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1064 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1123
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1124 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1154
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 841 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 881
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 882 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 941
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 942 GSLISRQMIQRYEMYFRDSQGHIIRGAYR 970
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 900 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 942
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1492 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1537
>gi|432090336|gb|ELK23764.1| Chromodomain-helicase-DNA-binding protein 8 [Myotis davidii]
Length = 2070
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 437 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 494
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 495 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 554
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 555 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 614
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 615 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 646
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 333 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 373
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 374 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 433
Query: 130 ATFV 133
+
Sbjct: 434 GSLA 437
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 392 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 434
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 981 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1029
>gi|348500298|ref|XP_003437710.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9 [Oreochromis
niloticus]
Length = 2579
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR MLQ+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 582 SRQMLQQYEMYFRDAQGRIIR--GAYRFQAVITTFEMILGGCPELNAIEWRCVIIDEAHR 639
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEG +L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 640 LKNKNCKLLEGFKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDL 699
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 700 KTEEQVQKLQGILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 759
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG AN+PNL+NTMMELRKCC HPYL+ G
Sbjct: 760 AKGAGQANMPNLVNTMMELRKCCNHPYLIKG 790
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 98/150 (65%), Gaps = 21/150 (14%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA+ W K E+S Y+N N+LR YQLEG+NWL+F+W+N
Sbjct: 476 ERPPANLWKKREQSRQYRNGNSLRDYQLEGVNWLLFNWYN-------------------R 516
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF++ + + GI+GPFL+IAPLSTI NW+REF WT LNVIVY
Sbjct: 517 RNCILADEMGLGKTIQSITFLEEIHRIGIKGPFLIIAPLSTIANWEREFRTWTHLNVIVY 576
Query: 129 HATFVV--LLQTGSKFFRICLEFFVDAVFK 156
H + V +LQ +FR + ++
Sbjct: 577 HGSMVSRQMLQQYEMYFRDAQGRIIRGAYR 606
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F++ + + GI+GPFL+IAPLSTI NW+REF WT LNVIVYHG
Sbjct: 536 FLEEIHRIGIKGPFLIIAPLSTIANWEREFRTWTHLNVIVYHG 578
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 225 NWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++ R+ECF+VE+ LL +GWGRWK+ L + F+ TE VE + R L
Sbjct: 1132 SYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTEWDVESICRAL 1178
>gi|196012568|ref|XP_002116146.1| hypothetical protein TRIADDRAFT_30634 [Trichoplax adhaerens]
gi|190581101|gb|EDV21179.1| hypothetical protein TRIADDRAFT_30634 [Trichoplax adhaerens]
Length = 701
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 185/214 (86%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+SASR ++++YEL++R+ + + KF ++ITT+EII+SD +L+ W++ +IDE
Sbjct: 55 SSASRQLIRDYELYYRDSNG--VPNLNAIKFQIIITTYEIILSDNPDLRAIPWKVVVIDE 112
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNR+CKLLEGL+LLH++HR+LL+GTPLQNNV ELFSLLNFLEP +F+++ F+SEF
Sbjct: 113 AHRLKNRHCKLLEGLKLLHMDHRILLTGTPLQNNVEELFSLLNFLEPARFASDVMFLSEF 172
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE++V+KLQ +LKPMMLRRLKEDVEK++APKEET++EVELT IQKK+YR ILERNF
Sbjct: 173 GNLKTEAQVDKLQTILKPMMLRRLKEDVEKNLAPKEETIIEVELTPIQKKFYRAILERNF 232
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ++N+PNLMNTMMELRKCC HP+L+NG
Sbjct: 233 NFLSKGANTSNLPNLMNTMMELRKCCNHPFLING 266
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 47/55 (85%)
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHAT 131
MGLGKTIQSL+F++ + IRGPFLVIAPLSTI NWQRE EAWTD+NV+VYH +
Sbjct: 1 MGLGKTIQSLSFLNHLLNYNIRGPFLVIAPLSTIANWQREIEAWTDMNVVVYHGS 55
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F++ + IRGPFLVIAPLSTI NWQRE EAWTD+NV+VYHG SR+ L Y
Sbjct: 12 FLNHLLNYNIRGPFLVIAPLSTIANWQREIEAWTDMNVVVYHG--SSASRQLIRDYELYY 69
Query: 210 VAADYVP 216
++ VP
Sbjct: 70 RDSNGVP 76
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 213 DYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
DY PK WSR ECF+VE+ LL +GWGRWK+ L F+ TE+ +E +++ +
Sbjct: 589 DYTPKK----QVGWSRVECFRVEKYLLIYGWGRWKDILRVARFKRKLTEKDIEAISKTI 643
>gi|326668862|ref|XP_699360.4| PREDICTED: chromodomain-helicase-DNA-binding protein 6 [Danio
rerio]
Length = 2902
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 176/211 (83%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+ +YE++ R+++ + + +KF +ITTFE+I++DC ELK NWR +IDEAHR
Sbjct: 561 SRQMILQYEMYHRDEQGNIMSGE--FKFQGVITTFEMIMADCPELKKINWRCVVIDEAHR 618
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L++LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + F+ EFG L
Sbjct: 619 LKNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETTFLEEFGDL 678
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APKEET++EVELTNIQKKYYR ILE+NF+FL
Sbjct: 679 KTEEQVKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFAFL 738
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+ G
Sbjct: 739 AKGANQHNMPNLINTMMELRKCCNHPYLITG 769
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 86/125 (68%), Gaps = 19/125 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++P W KLEKS Y+N N LR YQLEG+NWL+F+W+N
Sbjct: 455 ERPLPEQWQKLEKSRDYRNGNQLREYQLEGMNWLLFNWYN-------------------R 495
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
+NCILADEMGLGKTIQS+TF+ +F G+RGPFL+IAPLSTI NW+REF WT++NVIVY
Sbjct: 496 KNCILADEMGLGKTIQSITFLYEIFLMGLRGPFLIIAPLSTITNWEREFRTWTEMNVIVY 555
Query: 129 HATFV 133
H + +
Sbjct: 556 HGSQI 560
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 41/51 (80%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ +F G+RGPFL+IAPLSTI NW+REF WT++NVIVYHG ++SR+
Sbjct: 515 FLYEIFLMGLRGPFLIIAPLSTITNWEREFRTWTEMNVIVYHG--SQISRQ 563
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E +E L R L
Sbjct: 1110 RAECFRVEKNLLIFGWGRWKDILNHGRFKWHLAERDMEVLCRAL 1153
>gi|51476360|emb|CAH18170.1| hypothetical protein [Homo sapiens]
Length = 2302
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 173/212 (81%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 615 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 672
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ FG
Sbjct: 673 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKNFGD 732
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 733 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 792
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 793 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 824
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 511 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 551
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 552 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 611
Query: 130 ATFV 133
+
Sbjct: 612 GSLA 615
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 570 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 612
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1127 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1172
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1173 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1207
>gi|432852988|ref|XP_004067485.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like [Oryzias
latipes]
Length = 2979
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR MLQ+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 996 SRQMLQQYEMYFRDAQGRAIR--GAYRFQAVITTFEMILGGCPELNAIEWRCVIIDEAHR 1053
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEG +L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1054 LKNKNCKLLEGFKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPTRFPSENTFMQEFGDL 1113
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1114 KTEEQVQKLQGILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1173
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG AN+PNL+NTMMELRKCC HPYL+ G
Sbjct: 1174 AKGAGQANMPNLVNTMMELRKCCNHPYLIKG 1204
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 105/165 (63%), Gaps = 29/165 (17%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA+ W K E S Y+N N LR YQLEG+NWL+F+W+N
Sbjct: 890 ERPPANLWKKREHSREYRNGNMLRDYQLEGVNWLLFNWYN-------------------R 930
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF++ +++ GI+GPFL+IAPLSTI NW+REF WT LNVIVY
Sbjct: 931 RNCILADEMGLGKTIQSITFLEEIYRIGIKGPFLIIAPLSTIANWEREFHTWTHLNVIVY 990
Query: 129 HATFVV--LLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + V +LQ +FR DA + IRG + A ++T
Sbjct: 991 HGSVVSRQMLQQYEMYFR-------DAQGR-AIRGAYRFQAVITT 1027
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 37/43 (86%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F++ +++ GI+GPFL+IAPLSTI NW+REF WT LNVIVYHG
Sbjct: 950 FLEEIYRIGIKGPFLIIAPLSTIANWEREFHTWTHLNVIVYHG 992
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 225 NWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++ R+ECF+VE+ LL +GWGRWK+ L + F+ TE VE + R L
Sbjct: 1545 SYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTEWDVESICRAL 1591
>gi|444725589|gb|ELW66150.1| Chromodomain-helicase-DNA-binding protein 9 [Tupaia chinensis]
Length = 1636
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 869 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 926
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 927 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 986
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 987 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1046
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1047 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1077
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 764 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 804
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 805 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 864
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 865 GSLISRQMIQQYEMYFR 881
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 823 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 865
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1415 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1460
>gi|351704328|gb|EHB07247.1| Chromodomain-helicase-DNA-binding protein 9, partial [Heterocephalus
glaber]
Length = 1573
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 216 PKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
P D YG R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1483 PCDRSSGYG---RTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|119603204|gb|EAW82798.1| chromodomain helicase DNA binding protein 9, isoform CRA_f [Homo
sapiens]
Length = 336
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 58 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 115
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 116 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 175
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 176 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 235
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 236 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 266
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVV-- 134
MGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH + +
Sbjct: 1 MGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQ 60
Query: 135 LLQTGSKFFR 144
++Q +FR
Sbjct: 61 MIQQYEMYFR 70
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 12 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 54
>gi|410919259|ref|XP_003973102.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 6-like [Takifugu rubripes]
Length = 3841
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 175/211 (82%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+ +YE+F+R+ + I + KFH LITTFE+I++DC EL+ +WR +IDEAHR
Sbjct: 1045 SRQMILQYEMFYRDAQGNTIPS--VLKFHGLITTFEMIMADCPELRKLHWRCVVIDEAHR 1102
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + F+ EFG L
Sbjct: 1103 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPLQFQSETTFLEEFGDL 1162
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KT+ +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+ FSFL
Sbjct: 1163 KTDEQVKKLQAILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKXFSFL 1222
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG N+PNL+NTMMELRKCC HPYL+ G
Sbjct: 1223 SKGANQHNMPNLINTMMELRKCCNHPYLITG 1253
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 96/150 (64%), Gaps = 23/150 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP+ W KLE+S Y+N N LR YQLEG+NWL+F+W+N +
Sbjct: 940 RPPSEKWQKLERSRDYRNGNELREYQLEGMNWLLFNWYN-------------------RK 980
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ +F IRGPFL+IAPLSTI NW+REF WT +NVIVYH
Sbjct: 981 NCILADEMGLGKTIQSITFLFEIFNMSIRGPFLIIAPLSTITNWEREFRTWTHMNVIVYH 1040
Query: 130 ATFV---VLLQTGSKFFRICLEFFVDAVFK 156
+ + ++LQ F+R + +V K
Sbjct: 1041 GSQISRQMILQY-EMFYRDAQGNTIPSVLK 1069
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ +F IRGPFL+IAPLSTI NW+REF WT +NVIVYHG ++SR+
Sbjct: 999 FLFEIFNMSIRGPFLIIAPLSTITNWEREFRTWTHMNVIVYHG--SQISRQ 1047
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E +E + R L
Sbjct: 1594 RAECFRVEKNLLIFGWGRWKDILNHGRFKWHLAERDMEVICRAL 1637
>gi|355678742|gb|AER96201.1| chromodomain helicase DNA binding protein 8 [Mustela putorius furo]
Length = 840
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 493 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 550
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 551 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 610
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 611 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 670
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 671 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 702
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 389 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 429
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 430 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 489
Query: 130 ATFV 133
+
Sbjct: 490 GSLA 493
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 448 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 490
>gi|49476336|gb|AAT66509.1| KISH2 [Homo sapiens]
Length = 2881
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 171/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 FKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 940 GSLISRQMIQQYEMYFRDSQGRIIRGAYR 968
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>gi|358255110|dbj|GAA56827.1| chromodomain-helicase-DNA-binding protein 7 [Clonorchis sinensis]
Length = 4088
Score = 303 bits (775), Expect = 2e-79, Method: Composition-based stats.
Identities = 137/214 (64%), Positives = 171/214 (79%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+S SRNM+QEYE+F++ N D+YKFH L+TTFE++++D +W +IDE
Sbjct: 1735 SSISRNMIQEYEIFYKRRPNDTAVRHDVYKFHALVTTFEVLMTDIEFFGQVHWAAAVIDE 1794
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN+ CKL EGLR L L+HRVLL+GTPLQNNV ELF LLNFLEP++F+ + +F++E+
Sbjct: 1795 AHRLKNKKCKLGEGLRYLELDHRVLLTGTPLQNNVEELFGLLNFLEPERFNCSSSFVAEY 1854
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V L+ LLKPMMLRRLKEDVEKS+APKEET+ VELTNIQKKYYR I+ERNF
Sbjct: 1855 GDLKTEEQVENLKTLLKPMMLRRLKEDVEKSLAPKEETI--VELTNIQKKYYRAIMERNF 1912
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FL KG+T +N PNLMN MMELRKCC HP+L+ G
Sbjct: 1913 AFLCKGSTYSNAPNLMNVMMELRKCCNHPFLIKG 1946
Score = 145 bits (365), Expect = 6e-32, Method: Composition-based stats.
Identities = 65/124 (52%), Positives = 81/124 (65%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P S W +E VYKN+N LR YQLEG+NWL + WF+ R
Sbjct: 1633 RPDPSTWRPIEAIKVYKNNNKLRDYQLEGVNWLTYCWFH-------------------HR 1673
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKT+QS+ F+ + K G+RGPFLVI PLST+ NWQREFE W+D NV+VYH
Sbjct: 1674 NCILADEMGLGKTVQSVAFLLELEKAGVRGPFLVIVPLSTVANWQREFENWSDFNVVVYH 1733
Query: 130 ATFV 133
+ +
Sbjct: 1734 GSSI 1737
Score = 73.9 bits (180), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/37 (75%), Positives = 32/37 (86%)
Query: 156 KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
K G+RGPFLVI PLST+ NWQREFE W+D NV+VYHG
Sbjct: 1698 KAGVRGPFLVIVPLSTVANWQREFENWSDFNVVVYHG 1734
>gi|417407024|gb|JAA50147.1| Putative chromatin remodeling complex wstf-iswi small subunit
[Desmodus rotundus]
Length = 2606
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 142/211 (67%), Positives = 171/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 967 SRQMIQRYEMYFRDAQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1024
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1025 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1084
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1085 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1144
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1145 AKGVGQTNVPNLVNTMMELRKCCNHPYLIKG 1175
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 105/164 (64%), Gaps = 29/164 (17%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 862 RPPSNLWKKIDQSREYKNCNQLREYQLEGLNWLLFNWYN-------------------RR 902
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 903 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 962
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
+ + ++Q +FR DA + IRG + A ++T
Sbjct: 963 GSLISRQMIQRYEMYFR-------DAQGRI-IRGAYRFQAIITT 998
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 921 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 963
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 216 PKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
P+ + ++RSECF+VE+ LL +GWGRW + L++ ++ TE VE + R +
Sbjct: 1506 PRRPQDRSQGYARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEHDVETICRTI 1561
>gi|449494842|ref|XP_004175326.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 7 [Taeniopygia guttata]
Length = 3017
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/219 (64%), Positives = 177/219 (80%), Gaps = 7/219 (3%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1051 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1108
Query: 355 AHRLKNRNCKLLEGLRLLHLEH-----RVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEA 409
AHRLKNRNCKLLEGL+++ L+ +VLL+GTPLQN V +LFSLL+FLE +F +
Sbjct: 1109 AHRLKNRNCKLLEGLKMMDLKDSSGSIKVLLTGTPLQNTVEKLFSLLHFLETGRFPSETT 1168
Query: 410 FMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGI 469
FM EFG LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR I
Sbjct: 1169 FMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAI 1228
Query: 470 LERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LE+NF+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1229 LEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1267
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 104/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N T
Sbjct: 948 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------T 988
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 989 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1048
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1049 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1085
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1008 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1056
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1608 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1653
>gi|256073356|ref|XP_002572997.1| hypothetical protein [Schistosoma mansoni]
Length = 3580
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 174/214 (81%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+S SR+M+QEYE+F+R + D+YKFHV++TTFE++++D +W +IDE
Sbjct: 1252 SSVSRSMIQEYEMFYRK-RTSGAPRHDIYKFHVIVTTFEVLMNDIEFFGQIHWAAAVIDE 1310
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN+ CKL EGLR L L+HRVLL+GTPLQNNV ELF LLNFLEP++FS + F++E+
Sbjct: 1311 AHRLKNKKCKLGEGLRYLDLDHRVLLTGTPLQNNVEELFGLLNFLEPEKFSCSATFVAEY 1370
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G+LKTE +V +L+ +LKPMMLRRLKEDVEKS+APKEETVVEVELTNIQKKYYR I+ERNF
Sbjct: 1371 GELKTEEQVERLKTVLKPMMLRRLKEDVEKSLAPKEETVVEVELTNIQKKYYRAIMERNF 1430
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFL KG +S N PNLMN MMELRKCC HP+L+ G
Sbjct: 1431 SFLCKG-SSTNAPNLMNIMMELRKCCNHPFLIKG 1463
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 88/137 (64%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P S W ++ + VYKN+N LR YQ+EG+NWL F W++ RNCILA
Sbjct: 1150 RPDPSTWKPIDSNTVYKNNNKLRDYQVEGVNWLTFCWYHHRNCILA-------------- 1195
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
DEMGLGKT+QS+TF+ +FK + GPFL+I PLST+ NWQREFE W+D NVI+YH
Sbjct: 1196 -----DEMGLGKTVQSVTFLLEIFKANVEGPFLIIVPLSTVGNWQREFENWSDFNVIIYH 1250
Query: 130 ATFV--VLLQTGSKFFR 144
+ V ++Q F+R
Sbjct: 1251 GSSVSRSMIQEYEMFYR 1267
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ +FK + GPFL+I PLST+ NWQREFE W+D NVI+YHG
Sbjct: 1209 FLLEIFKANVEGPFLIIVPLSTVGNWQREFENWSDFNVIIYHG 1251
>gi|350645258|emb|CCD60039.1| hypothetical protein Smp_130470 [Schistosoma mansoni]
Length = 3580
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 174/214 (81%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+S SR+M+QEYE+F+R + D+YKFHV++TTFE++++D +W +IDE
Sbjct: 1252 SSVSRSMIQEYEMFYRK-RTSGAPRHDIYKFHVIVTTFEVLMNDIEFFGQIHWAAAVIDE 1310
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN+ CKL EGLR L L+HRVLL+GTPLQNNV ELF LLNFLEP++FS + F++E+
Sbjct: 1311 AHRLKNKKCKLGEGLRYLDLDHRVLLTGTPLQNNVEELFGLLNFLEPEKFSCSATFVAEY 1370
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G+LKTE +V +L+ +LKPMMLRRLKEDVEKS+APKEETVVEVELTNIQKKYYR I+ERNF
Sbjct: 1371 GELKTEEQVERLKTVLKPMMLRRLKEDVEKSLAPKEETVVEVELTNIQKKYYRAIMERNF 1430
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFL KG +S N PNLMN MMELRKCC HP+L+ G
Sbjct: 1431 SFLCKG-SSTNAPNLMNIMMELRKCCNHPFLIKG 1463
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 88/137 (64%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P S W ++ + VYKN+N LR YQ+EG+NWL F W++ RNCILA
Sbjct: 1150 RPDPSTWKPIDSNTVYKNNNKLRDYQVEGVNWLTFCWYHHRNCILA-------------- 1195
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
DEMGLGKT+QS+TF+ +FK + GPFL+I PLST+ NWQREFE W+D NVI+YH
Sbjct: 1196 -----DEMGLGKTVQSVTFLLEIFKANVEGPFLIIVPLSTVGNWQREFENWSDFNVIIYH 1250
Query: 130 ATFV--VLLQTGSKFFR 144
+ V ++Q F+R
Sbjct: 1251 GSSVSRSMIQEYEMFYR 1267
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ +FK + GPFL+I PLST+ NWQREFE W+D NVI+YHG
Sbjct: 1209 FLLEIFKANVEGPFLIIVPLSTVGNWQREFENWSDFNVIIYHG 1251
>gi|198433296|ref|XP_002124821.1| PREDICTED: similar to chromodomain helicase DNA binding protein 7
[Ciona intestinalis]
Length = 4218
Score = 298 bits (764), Expect = 4e-78, Method: Composition-based stats.
Identities = 139/214 (64%), Positives = 169/214 (78%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ SR+ML YE F R++ I YK H +ITT+E+I+ D L+D +WR IIDE
Sbjct: 1664 SQTSRDMLHTYEWFCRDENLDEIP--GCYKVHAVITTYEMIVLDTPHLRDVDWRCLIIDE 1721
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN +CKL+E LR + LEH+VLL+GTPLQNNV ELF+LL+FL+P+ F+ +AF EF
Sbjct: 1722 AHRLKNLSCKLVESLRFMQLEHKVLLTGTPLQNNVEELFALLSFLQPETFNCQQAFSLEF 1781
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LK ++V KLQ LLKPMMLRRLKEDVEKS+APK+ET++EVELT+IQKKYYR ILERNF
Sbjct: 1782 GNLKNNTQVEKLQELLKPMMLRRLKEDVEKSLAPKQETIIEVELTSIQKKYYRAILERNF 1841
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FL+KGTT NVPNLMNTMMELRKCC HPYL+ G
Sbjct: 1842 EFLAKGTTGGNVPNLMNTMMELRKCCNHPYLIKG 1875
Score = 148 bits (374), Expect = 6e-33, Method: Composition-based stats.
Identities = 67/127 (52%), Positives = 85/127 (66%), Gaps = 20/127 (15%)
Query: 6 KPKKKPPASDWVKL-EKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
K +P W +L E + V++N+N LR YQ EG+NWL+F+W+N
Sbjct: 1557 KKMSRPHKDMWKRLSEDNTVFQNNNRLRDYQFEGINWLLFNWYN---------------- 1600
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLN 124
RNCILADEMGLGKTIQS+TF+ +F GIRGPFLV+APLSTI NWQREFE+WT +N
Sbjct: 1601 ---KRNCILADEMGLGKTIQSITFLQKIFDHGIRGPFLVVAPLSTIANWQREFESWTTIN 1657
Query: 125 VIVYHAT 131
+VYH +
Sbjct: 1658 AVVYHGS 1664
Score = 77.4 bits (189), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRR 194
F+ +F GIRGPFLV+APLSTI NWQREFE+WT +N +VYHG +
Sbjct: 1621 FLQKIFDHGIRGPFLVVAPLSTIANWQREFESWTTINAVVYHGSQ 1665
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLA 251
G + R K + R + A + G W R +CF++E+ LLT+GWGRW
Sbjct: 2199 GDERSEGRSKKSKFRSRAGGAGGGQRKG------WGRRDCFRIEKCLLTYGWGRWSAIQT 2252
Query: 252 NNEFRNGWTEEYVEELARLL 271
F + E +EEL+R++
Sbjct: 2253 RGRFSGMISHEELEELSRIV 2272
>gi|410912244|ref|XP_003969600.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like
[Takifugu rubripes]
Length = 2438
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 138/211 (65%), Positives = 168/211 (79%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR MLQ+YE++FR+ + + + +ITTFE+I+ C EL WR +IDEAHR
Sbjct: 455 SRQMLQQYEMYFRDSQVNIVVV--CLQIQAVITTFEMILGGCPELNAIEWRCVVIDEAHR 512
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEG +L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 513 LKNKNCKLLEGFKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFMQEFGDL 572
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 573 KTEEQVQKLQGILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 632
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG AN+PNL+NTMMELRKCC HPYL+ G
Sbjct: 633 AKGAGQANMPNLVNTMMELRKCCNHPYLIKG 663
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 101/159 (63%), Gaps = 31/159 (19%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++P + W K+E S Y+N NTLR YQLEG+NWL+F+W+N
Sbjct: 349 ERPATNLWKKMEHSREYRNGNTLRDYQLEGVNWLLFNWYN-------------------R 389
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF++ +++ GI+GPFL+IAPLSTI NW+REF WT LN IVY
Sbjct: 390 RNCILADEMGLGKTIQSITFLEEIYRMGIKGPFLIIAPLSTIANWEREFRTWTYLNAIVY 449
Query: 129 HATFVV--LLQTGSKFFR--------ICLEFFVDAVFKT 157
H + V +LQ +FR +CL+ + AV T
Sbjct: 450 HGSMVSRQMLQQYEMYFRDSQVNIVVVCLQ--IQAVITT 486
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F++ +++ GI+GPFL+IAPLSTI NW+REF WT LN IVYHG
Sbjct: 409 FLEEIYRMGIKGPFLIIAPLSTIANWEREFRTWTYLNAIVYHG 451
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 225 NWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++ R+ECF+VE+ LL +GWGRWK+ LA+ F+ TE VE + R L
Sbjct: 1002 SYGRTECFRVEKNLLVYGWGRWKDILAHGRFKKQLTEWDVESICRAL 1048
>gi|326927241|ref|XP_003209801.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like
[Meleagris gallopavo]
Length = 2782
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 135/186 (72%), Positives = 155/186 (83%)
Query: 323 YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSG 382
Y+F +ITTFE+I+ C EL WR IIDEAHRLKNRNCKLLEGL+L++LEH+VLL+G
Sbjct: 871 YRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTG 930
Query: 383 TPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDV 442
TPLQN V ELFSLL+FLEP +F FM EFG LKTE +V KLQ +LKPMMLRRLKEDV
Sbjct: 931 TPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDV 990
Query: 443 EKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIH 502
EK +APKEET++EVELTNIQKKYYR ILE+NF+FLSKG ANVPNL+NTMMELRKCC H
Sbjct: 991 EKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNH 1050
Query: 503 PYLLNG 508
PYL+ G
Sbjct: 1051 PYLIKG 1056
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEM 58
+PP + W K+E S YKN N LR YQLEGLNWL+F+W+N + A+ +
Sbjct: 807 RPPPNSWKKIEHSREYKNGNQLREYQLEGLNWLLFNWYNSSMSMYANRV 855
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E+ VE + R L
Sbjct: 1394 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEQDVEIICRAL 1439
>gi|324500342|gb|ADY40163.1| Chromodomain-helicase-DNA-binding protein 8, partial [Ascaris suum]
Length = 1811
Score = 290 bits (742), Expect = 1e-75, Method: Composition-based stats.
Identities = 134/215 (62%), Positives = 176/215 (81%), Gaps = 5/215 (2%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ASR ++Q+ E ++R D +Q I +K++ KF LITTFE+++ DC L+ N+ +C+IDE
Sbjct: 1162 SAASRQLIQQSEFYYRPD-DQKISKKNVVKFDALITTFEMVVCDCDILRRINYHVCVIDE 1220
Query: 355 AHRLKNRNCKLLEG-LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
AHRLKNRNCKLL G L +EHR+LL+GTPLQNN+ EL+SLLNFLEP+QF ++ AF+ +
Sbjct: 1221 AHRLKNRNCKLLTGGLLSFTVEHRLLLTGTPLQNNIEELYSLLNFLEPEQFHSSSAFLEQ 1280
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
FGQ +TE +V KLQ +LKPMMLRRLKEDVEK++ PKEET++E++L+N QKKYYR ILERN
Sbjct: 1281 FGQCQTEDQVQKLQEILKPMMLRRLKEDVEKTLQPKEETIIEIQLSNTQKKYYRAILERN 1340
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FS L KGT+ VP+LMNTMMELRKCC HP+L+NG
Sbjct: 1341 FSHLCKGTS---VPSLMNTMMELRKCCNHPFLING 1372
Score = 150 bits (378), Expect = 2e-33, Method: Composition-based stats.
Identities = 67/145 (46%), Positives = 93/145 (64%), Gaps = 21/145 (14%)
Query: 2 SLIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
SL KP+ +P AS+W K+ + +K+DNTLR YQ EG+NWL++ ++N
Sbjct: 1052 SLKMKPRPRPSASEWRKIPEETTFKDDNTLRGYQFEGVNWLLYCYYN------------- 1098
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT 121
+NCILADEMGLGKT+Q++ F+ V+ GI GPFL++ PLSTI NWQREFE WT
Sbjct: 1099 ------RQNCILADEMGLGKTVQTICFLQRVYDYGIHGPFLIVVPLSTIHNWQREFETWT 1152
Query: 122 DLNVIVYHATFVV--LLQTGSKFFR 144
D+N I+YH + L+Q ++R
Sbjct: 1153 DMNAIIYHGSAASRQLIQQSEFYYR 1177
Score = 73.2 bits (178), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFL++ PLSTI NWQREFE WTD+N I+YHG
Sbjct: 1119 FLQRVYDYGIHGPFLIVVPLSTIHNWQREFETWTDMNAIIYHG 1161
Score = 44.3 bits (103), Expect = 0.15, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLA 251
GR++ + D++R R +Y P + +++SE FKVE+ L +GWGRWK
Sbjct: 1697 GRKRGERKGDRKRRRED---EEYRPDELA-----FNKSEYFKVEKLLAQYGWGRWKAMRE 1748
Query: 252 NNEFRNGWTEEYVEELARLLDL 273
++ + +E +E ++R L L
Sbjct: 1749 ASDLKESVSEADIEHISRTLLL 1770
>gi|324499657|gb|ADY39859.1| Chromodomain-helicase-DNA-binding protein 8 [Ascaris suum]
Length = 2707
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 134/215 (62%), Positives = 176/215 (81%), Gaps = 5/215 (2%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ASR ++Q+ E ++R D +Q I +K++ KF LITTFE+++ DC L+ N+ +C+IDE
Sbjct: 1198 SAASRQLIQQSEFYYRPD-DQKISKKNVVKFDALITTFEMVVCDCDILRRINYHVCVIDE 1256
Query: 355 AHRLKNRNCKLLEG-LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
AHRLKNRNCKLL G L +EHR+LL+GTPLQNN+ EL+SLLNFLEP+QF ++ AF+ +
Sbjct: 1257 AHRLKNRNCKLLTGGLLSFTVEHRLLLTGTPLQNNIEELYSLLNFLEPEQFHSSSAFLEQ 1316
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
FGQ +TE +V KLQ +LKPMMLRRLKEDVEK++ PKEET++E++L+N QKKYYR ILERN
Sbjct: 1317 FGQCQTEDQVQKLQEILKPMMLRRLKEDVEKTLQPKEETIIEIQLSNTQKKYYRAILERN 1376
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FS L KGT+ VP+LMNTMMELRKCC HP+L+NG
Sbjct: 1377 FSHLCKGTS---VPSLMNTMMELRKCCNHPFLING 1408
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 93/145 (64%), Gaps = 21/145 (14%)
Query: 2 SLIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
SL KP+ +P AS+W K+ + +K+DNTLR YQ EG+NWL++ ++N
Sbjct: 1088 SLKMKPRPRPSASEWRKIPEETTFKDDNTLRGYQFEGVNWLLYCYYN------------- 1134
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT 121
+NCILADEMGLGKT+Q++ F+ V+ GI GPFL++ PLSTI NWQREFE WT
Sbjct: 1135 ------RQNCILADEMGLGKTVQTICFLQRVYDYGIHGPFLIVVPLSTIHNWQREFETWT 1188
Query: 122 DLNVIVYHATFVV--LLQTGSKFFR 144
D+N I+YH + L+Q ++R
Sbjct: 1189 DMNAIIYHGSAASRQLIQQSEFYYR 1213
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 139 GSKFFRICLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
G IC F+ V+ GI GPFL++ PLSTI NWQREFE WTD+N I+YHG
Sbjct: 1147 GKTVQTIC---FLQRVYDYGIHGPFLIVVPLSTIHNWQREFETWTDMNAIIYHG 1197
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLA 251
GR++ + D++R R +Y P E+ + ++SE FKVE+ L +GWGRWK
Sbjct: 1733 GRKRGERKGDRKRRRED---EEYRPD--ELAF---NKSEYFKVEKLLAQYGWGRWKAMRE 1784
Query: 252 NNEFRNGWTEEYVEELARLL 271
++ + +E +E ++R L
Sbjct: 1785 ASDLKESVSEADIEHISRTL 1804
>gi|444729231|gb|ELW69658.1| Chromodomain-helicase-DNA-binding protein 6 [Tupaia chinensis]
Length = 2557
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 166/211 (78%), Gaps = 19/211 (9%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 464 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 521
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLE ++ S
Sbjct: 522 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLERERLS------------ 569
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 570 -----VKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 624
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 625 TKGANQHNMPNLINTMMELRKCCNHPYLING 655
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 360 PASDAWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 400
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 401 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 460
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 461 SQISRQMIQQYEMVYRDAQGNPLSGVFK 488
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 78/86 (90%)
Query: 423 VNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTT 482
V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL+KG
Sbjct: 711 VKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLTKGAN 770
Query: 483 SANVPNLMNTMMELRKCCIHPYLLNG 508
N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 771 QHNMPNLINTMMELRKCCNHPYLING 796
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 418 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 475
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 476 RDAQGNPLSG 485
>gi|313217104|emb|CBY38281.1| unnamed protein product [Oikopleura dioica]
Length = 1430
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 169/214 (78%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ SR M+ +YEL+ R DK + K D ++F LITT+E+I++D E+++ NW+L IIDE
Sbjct: 514 SAQSRQMIHQYELYQR-DKKGYPKRGD-FRFDALITTYEMIVADIPEIRNVNWQLMIIDE 571
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN KL E L+ +H+EH+VLL+GTPLQNN+ EL++LLNF+ P F + FM E+
Sbjct: 572 AHRLKNTKSKLAENLKNMHIEHKVLLTGTPLQNNIEELYALLNFMNPTDFYDIGYFMREY 631
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G L + V K+Q +LKP+MLRRLKEDVEKS+APKEET++EVELTNIQKKYYR ILERNF
Sbjct: 632 GILTNKEHVEKMQNVLKPIMLRRLKEDVEKSLAPKEETIIEVELTNIQKKYYRAILERNF 691
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FLSKG ++ NVP+LMNTMMELRKCC HP+L+ G
Sbjct: 692 DFLSKGASTGNVPSLMNTMMELRKCCNHPFLIKG 725
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 101/182 (55%), Gaps = 33/182 (18%)
Query: 5 KKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
K+P +PP S W KLE +KN LR YQ+EG++WL+F+W+
Sbjct: 407 KRPSDRPPISQWRKLEHPQRFKNSCELREYQVEGVSWLLFNWYQ---------------- 450
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLN 124
RNCILADEMGLGKTIQS+TF+ + +T RGPFL++ PLST+ NW REFE WTDLN
Sbjct: 451 ---KRNCILADEMGLGKTIQSITFIQKICETNHRGPFLIVVPLSTVGNWIREFETWTDLN 507
Query: 125 VIVYHATFVV--------LLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLSTIP--N 174
IVYH + L Q K + +F DA+ T +++A + I N
Sbjct: 508 AIVYHGSAQSRQMIHQYELYQRDKKGYPKRGDFRFDALITTY----EMIVADIPEIRNVN 563
Query: 175 WQ 176
WQ
Sbjct: 564 WQ 565
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + +T RGPFL++ PLST+ NW REFE WTDLN IVYHG
Sbjct: 471 FIQKICETNHRGPFLIVVPLSTVGNWIREFETWTDLNAIVYHG 513
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELAR-LLDLAG----GDGK 279
W R E FK+++GLL FGWGRW++ + + + E+ +EE+AR +L LA GD K
Sbjct: 1062 WGRKESFKLQKGLLMFGWGRWQDISEHCQLSKSFPEKEIEEVARAVLSLAASCYNGDDK 1120
>gi|313231904|emb|CBY09016.1| unnamed protein product [Oikopleura dioica]
Length = 1677
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 169/214 (78%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ SR M+ +YEL+ R DK + K D ++F LITT+E+I++D E+++ NW+L IIDE
Sbjct: 454 SAQSRQMIHQYELYQR-DKKGYPKRGD-FRFDALITTYEMIVADIPEIRNVNWQLMIIDE 511
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN KL E L+ +H+EH+VLL+GTPLQNN+ EL++LLNF+ P F + FM E+
Sbjct: 512 AHRLKNTKSKLAENLKNMHIEHKVLLTGTPLQNNIEELYALLNFMNPTDFYDIGYFMREY 571
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G L + V K+Q +LKP+MLRRLKEDVEKS+APKEET++EVELTNIQKKYYR ILERNF
Sbjct: 572 GILTNKEHVEKMQNVLKPIMLRRLKEDVEKSLAPKEETIIEVELTNIQKKYYRAILERNF 631
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FLSKG ++ NVP+LMNTMMELRKCC HP+L+ G
Sbjct: 632 DFLSKGASTGNVPSLMNTMMELRKCCNHPFLIKG 665
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 101/182 (55%), Gaps = 33/182 (18%)
Query: 5 KKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
K+P +PP S W KLE +KN LR YQ+EG++WL+F+W+
Sbjct: 347 KRPSDRPPISQWRKLEHPQRFKNSCELREYQVEGVSWLLFNWYQ---------------- 390
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLN 124
RNCILADEMGLGKTIQS+TF+ + +T RGPFL++ PLST+ NW REFE WTDLN
Sbjct: 391 ---KRNCILADEMGLGKTIQSITFIQKICETNHRGPFLIVVPLSTVGNWIREFETWTDLN 447
Query: 125 VIVYHATFVV--------LLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLSTIP--N 174
IVYH + L Q K + +F DA+ T +++A + I N
Sbjct: 448 AIVYHGSAQSRQMIHQYELYQRDKKGYPKRGDFRFDALITTY----EMIVADIPEIRNVN 503
Query: 175 WQ 176
WQ
Sbjct: 504 WQ 505
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + +T RGPFL++ PLST+ NW REFE WTDLN IVYHG
Sbjct: 411 FIQKICETNHRGPFLIVVPLSTVGNWIREFETWTDLNAIVYHG 453
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELAR-LLDLAG----GDGK 279
W R E FK+++GLL FGWGRW++ + + + E+ +EE+AR +L LA GD K
Sbjct: 1002 WGRKESFKLQKGLLMFGWGRWQDISEHCQLSKSFPEKEIEEVARAVLSLAASCYNGDDK 1060
>gi|313217669|emb|CBY38714.1| unnamed protein product [Oikopleura dioica]
Length = 882
Score = 274 bits (700), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 130/214 (60%), Positives = 169/214 (78%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ SR M+ +YEL+ R DK + K D ++F LITT+E+I++D E+++ NW+L IIDE
Sbjct: 514 SAQSRQMIHQYELYQR-DKKGYPKRGD-FRFDALITTYEMIVADIPEIRNVNWQLMIIDE 571
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN KL E L+ +H+EH+VLL+GTPLQNN+ EL++LLNF+ P F + FM E+
Sbjct: 572 AHRLKNTKSKLAENLKNMHIEHKVLLTGTPLQNNIEELYALLNFMNPTDFYDIGYFMREY 631
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G L + V K+Q +LKP+MLRRLKEDVEKS+APKEET++EVELTNIQKKYYR ILERNF
Sbjct: 632 GILTNKEHVEKMQNVLKPIMLRRLKEDVEKSLAPKEETIIEVELTNIQKKYYRAILERNF 691
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FLSKG ++ NVP+LMNTMMELRKCC HP+L+ G
Sbjct: 692 DFLSKGASTGNVPSLMNTMMELRKCCNHPFLIKG 725
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/182 (42%), Positives = 101/182 (55%), Gaps = 33/182 (18%)
Query: 5 KKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
K+P +PP S W KLE +KN LR YQ+EG++WL+F+W+
Sbjct: 407 KRPSDRPPISQWRKLEHPQRFKNSCELREYQVEGVSWLLFNWYQ---------------- 450
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLN 124
RNCILADEMGLGKTIQS+TF+ + +T RGPFL++ PLST+ NW REFE WTDLN
Sbjct: 451 ---KRNCILADEMGLGKTIQSITFIQKICETNHRGPFLIVVPLSTVGNWIREFETWTDLN 507
Query: 125 VIVYHATFVV--------LLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLSTIP--N 174
IVYH + L Q K + +F DA+ T +++A + I N
Sbjct: 508 AIVYHGSAQSRQMIHQYELYQRDKKGYPKRGDFRFDALITTY----EMIVADIPEIRNVN 563
Query: 175 WQ 176
WQ
Sbjct: 564 WQ 565
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + +T RGPFL++ PLST+ NW REFE WTDLN IVYHG
Sbjct: 471 FIQKICETNHRGPFLIVVPLSTVGNWIREFETWTDLNAIVYHG 513
>gi|193203140|ref|NP_491426.2| Protein CHD-7 [Caenorhabditis elegans]
gi|373253785|emb|CCD61264.1| Protein CHD-7 [Caenorhabditis elegans]
Length = 2967
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 132/215 (61%), Positives = 167/215 (77%), Gaps = 9/215 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKE---KDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+R +LQ+YE+F+ DK + K+ K LITTFE ++SD LK WR+C+IDE
Sbjct: 1281 AREVLQQYEVFY--DKRHCGAKNWKKNFVKIDALITTFETVVSDVEFLKKIPWRVCVIDE 1338
Query: 355 AHRLKNRNCKLL-EGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
AHRLKNRNCKLL GL +EHRVLL+GTPLQNN++ELFSLLNFL PQQF N+ F+ +
Sbjct: 1339 AHRLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQNNIDELFSLLNFLHPQQFDNSATFLEQ 1398
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
FG +T+ +V KLQ +LKPMMLRRLKEDVEKS+ PKEET++EV+L+++QKK+YR ILERN
Sbjct: 1399 FGSCQTDDQVQKLQEILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAILERN 1458
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FS L KGT++ P+LMN MMELRKCC HP+L+NG
Sbjct: 1459 FSHLCKGTSA---PSLMNVMMELRKCCNHPFLING 1490
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 88/143 (61%), Gaps = 28/143 (19%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
K++P +W K+ S V+KN N+LR YQ EG++WL++ ++N +NCILA
Sbjct: 1174 KQRPEPEEWKKMSTSKVWKNGNSLREYQFEGVDWLLYCYYNAQNCILA------------ 1221
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIV 127
DEMGLGKT+Q++TF+ ++ GI GPFLV+ PLSTI NW REFE WTD+N IV
Sbjct: 1222 -------DEMGLGKTVQTITFLSRIYDYGIHGPFLVVVPLSTIQNWVREFETWTDMNAIV 1274
Query: 128 YHATFVVLLQTGSKFFRICLEFF 150
YH GS + R L+ +
Sbjct: 1275 YH---------GSAYAREVLQQY 1288
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 33/43 (76%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ ++ GI GPFLV+ PLSTI NW REFE WTD+N IVYHG
Sbjct: 1235 FLSRIYDYGIHGPFLVVVPLSTIQNWVREFETWTDMNAIVYHG 1277
>gi|268564215|ref|XP_002639045.1| C. briggsae CBR-TAG-192 protein [Caenorhabditis briggsae]
Length = 2869
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/218 (60%), Positives = 168/218 (77%), Gaps = 9/218 (4%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKE---KDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
++ +R +LQ+YE+F+ DK + K+ K LITTFE ++SD LK WR+C+
Sbjct: 1204 SAHAREVLQQYEVFY--DKRHCGAKNWKKNFVKIDALITTFETVVSDVEFLKKIPWRVCV 1261
Query: 352 IDEAHRLKNRNCKLL-EGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAF 410
IDEAHRLKNRNCKLL GL +EHRVLL+GTPLQNN+ ELFSLLNFL PQQF N+ F
Sbjct: 1262 IDEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQNNIEELFSLLNFLHPQQFDNSATF 1321
Query: 411 MSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGIL 470
+ +FG +T+ +V KLQ +LKPMMLRRLKEDVEKS+ PKEET++EV+L+++QKK+YR IL
Sbjct: 1322 LEQFGSCQTDDQVQKLQEILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAIL 1381
Query: 471 ERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
ERNFS L KGT++ P+LMN MMELRKCC HP+L+NG
Sbjct: 1382 ERNFSHLCKGTSA---PSLMNVMMELRKCCNHPFLING 1416
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 81/124 (65%), Gaps = 19/124 (15%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
K++P +W KL V+KN N+LR YQ EG++WL++ ++N +NCILA
Sbjct: 1100 KQRPEPEEWKKLSTKKVWKNGNSLREYQFEGVDWLLYCYYNAQNCILA------------ 1147
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIV 127
DEMGLGKT+Q++TF+ V+ GI GPFLV+ PLSTI NW REFE WTD+N IV
Sbjct: 1148 -------DEMGLGKTVQTITFLSQVYDYGIHGPFLVVVPLSTIQNWVREFETWTDMNAIV 1200
Query: 128 YHAT 131
YH +
Sbjct: 1201 YHGS 1204
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 33/43 (76%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLV+ PLSTI NW REFE WTD+N IVYHG
Sbjct: 1161 FLSQVYDYGIHGPFLVVVPLSTIQNWVREFETWTDMNAIVYHG 1203
>gi|341883025|gb|EGT38960.1| CBN-TAG-192 protein [Caenorhabditis brenneri]
Length = 2968
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/218 (60%), Positives = 168/218 (77%), Gaps = 9/218 (4%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKE---KDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
++ +R +LQ+YE+F+ DK + K+ K LITTFE ++SD LK WR+C+
Sbjct: 1267 SAHAREVLQQYEVFY--DKRHCGAKNWKKNFVKIDALITTFETVVSDVEFLKKIPWRVCV 1324
Query: 352 IDEAHRLKNRNCKLL-EGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAF 410
IDEAHRLKNRNCKLL GL +EHRVLL+GTPLQNN+ ELFSLLNFL PQQF N+ F
Sbjct: 1325 IDEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQNNIEELFSLLNFLHPQQFDNSATF 1384
Query: 411 MSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGIL 470
+ +FG +T+ +V KLQ +LKPMMLRRLKEDVEKS+ PKEET++EV+L+++QKK+YR IL
Sbjct: 1385 LEQFGSCQTDDQVQKLQEILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAIL 1444
Query: 471 ERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
ERNFS L KGT++ P+LMN MMELRKCC HP+L+NG
Sbjct: 1445 ERNFSHLCKGTSA---PSLMNVMMELRKCCNHPFLING 1479
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 83/124 (66%), Gaps = 19/124 (15%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
K++P +W KL S V+KN N+LR YQ EG++WL++ ++N
Sbjct: 1163 KQRPEPEEWKKLSTSKVWKNGNSLREYQFEGVDWLLYCYYN------------------- 1203
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIV 127
++NCILADEMGLGKT+Q++TF+ V+ GI GPFLV+ PLSTI NW REFE WTD+N IV
Sbjct: 1204 SQNCILADEMGLGKTVQTITFLSRVYDYGIHGPFLVVVPLSTIQNWVREFETWTDMNAIV 1263
Query: 128 YHAT 131
YH +
Sbjct: 1264 YHGS 1267
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 33/43 (76%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLV+ PLSTI NW REFE WTD+N IVYHG
Sbjct: 1224 FLSRVYDYGIHGPFLVVVPLSTIQNWVREFETWTDMNAIVYHG 1266
>gi|308497953|ref|XP_003111163.1| CRE-TAG-192 protein [Caenorhabditis remanei]
gi|308240711|gb|EFO84663.1| CRE-TAG-192 protein [Caenorhabditis remanei]
Length = 2998
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 132/217 (60%), Positives = 170/217 (78%), Gaps = 7/217 (3%)
Query: 295 ASASRNMLQEYELFF--RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
++ +R +LQ+YE+F+ R+ ++ K K+ K LITTFE ++SD LK WR+C+I
Sbjct: 1292 SAHAREVLQQYEVFYDKRHSGSKNWK-KNFVKIDALITTFETVVSDVEFLKKIPWRVCVI 1350
Query: 353 DEAHRLKNRNCKLL-EGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
DEAHRLKNRNCKLL GL +EHRVLL+GTPLQNN+ ELFSLLNFL PQQF N+ F+
Sbjct: 1351 DEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQNNIEELFSLLNFLHPQQFDNSANFL 1410
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
+FG +T+ +V KLQ +LKPMMLRRLKEDVEKS+ PKEET++EV+L+++QKK+YR ILE
Sbjct: 1411 EQFGSCQTDDQVQKLQEILKPMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAILE 1470
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
RNFS L KGT++ P+LMN MMELRKCC HP+L+NG
Sbjct: 1471 RNFSHLCKGTSA---PSLMNVMMELRKCCNHPFLING 1504
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 78/124 (62%), Gaps = 15/124 (12%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
K +P ++W + V+KN N+LR YQ EG++WL++
Sbjct: 1184 KNRPEPNEWKNMSTLKVWKNGNSLREYQFEGVDWLLYC---------------YYNYLYF 1228
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIV 127
++NCILADEMGLGKT+Q++TF+ ++ GI GPFLV+ PLSTI NW REFE WTD+N IV
Sbjct: 1229 SQNCILADEMGLGKTVQTITFLSQIYDYGIHGPFLVVVPLSTIQNWVREFETWTDMNAIV 1288
Query: 128 YHAT 131
YH +
Sbjct: 1289 YHGS 1292
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 33/43 (76%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ ++ GI GPFLV+ PLSTI NW REFE WTD+N IVYHG
Sbjct: 1249 FLSQIYDYGIHGPFLVVVPLSTIQNWVREFETWTDMNAIVYHG 1291
>gi|170590139|ref|XP_001899830.1| Associated with TFs and helicases family protein [Brugia malayi]
gi|158592749|gb|EDP31346.1| Associated with TFs and helicases family protein [Brugia malayi]
Length = 2707
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 174/215 (80%), Gaps = 5/215 (2%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ASR ++Q+ E ++R ++ + K +++ KF LITTFE+++SDC LK N+++CIIDE
Sbjct: 1135 SAASRQIIQQTEFYYRPEELKGGK-RNVVKFDALITTFEMVVSDCDVLKQINYQVCIIDE 1193
Query: 355 AHRLKNRNCKLLEGLRLLH-LEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
AHRLKNRNCKLL L EHRVLL+GTPLQNN+ EL+SLLNFLEP+QF ++ AF+ +
Sbjct: 1194 AHRLKNRNCKLLTSGLLSLTAEHRVLLTGTPLQNNIEELYSLLNFLEPEQFHSSSAFLEQ 1253
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
FGQ +TE +V +LQ +LKPMMLRRLKEDVEK++ PKEET++E++L+N QKKYYR ILERN
Sbjct: 1254 FGQCQTEDQVQRLQDILKPMMLRRLKEDVEKTLQPKEETIIEIQLSNTQKKYYRAILERN 1313
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FS L KGT+ VP+LMN MMELRKCC HP+L++G
Sbjct: 1314 FSHLCKGTS---VPSLMNAMMELRKCCNHPFLISG 1345
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 90/145 (62%), Gaps = 21/145 (14%)
Query: 2 SLIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
SL KPK P ASDW K+ + +K +N LR YQ EG+NWL++ ++N
Sbjct: 1025 SLKMKPKLHPSASDWSKIPEDITFKGNNRLREYQFEGVNWLLYCYYN------------- 1071
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT 121
+NCILADEMGLGKT+Q++ F+ V+ GI GPFL++ PLSTI NWQREFE WT
Sbjct: 1072 ------KQNCILADEMGLGKTVQTICFLQRVYDYGIHGPFLIVVPLSTIHNWQREFETWT 1125
Query: 122 DLNVIVYHATFVV--LLQTGSKFFR 144
D+N IVYH + ++Q ++R
Sbjct: 1126 DMNTIVYHGSAASRQIIQQTEFYYR 1150
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 139 GSKFFRICLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
G IC F+ V+ GI GPFL++ PLSTI NWQREFE WTD+N IVYHG
Sbjct: 1084 GKTVQTIC---FLQRVYDYGIHGPFLIVVPLSTIHNWQREFETWTDMNTIVYHG 1134
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 16/80 (20%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLA 251
G RKK RR+ E R +A +++SE FK+E+ L FGWGRWK
Sbjct: 1678 GDRKK--RREDEEYRPDELA--------------FNKSEYFKIEKVLGQFGWGRWKVMRE 1721
Query: 252 NNEFRNGWTEEYVEELARLL 271
++ ++ TE +E ++R L
Sbjct: 1722 ASDLKDNVTEIDIEHISRTL 1741
>gi|402593631|gb|EJW87558.1| helicase [Wuchereria bancrofti]
Length = 2673
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 174/215 (80%), Gaps = 5/215 (2%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ASR ++Q+ E ++R ++ + K +++ KF LITTFE+++SDC LK N+++CIIDE
Sbjct: 1085 SAASRQIIQQTEFYYRPEELKGGK-RNIVKFDALITTFEMVVSDCDVLKQINYQVCIIDE 1143
Query: 355 AHRLKNRNCKLLEGLRLLH-LEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
AHRLKNRNCKLL L EHRVLL+GTPLQNN+ EL+SLLNFLEP+QF ++ AF+ +
Sbjct: 1144 AHRLKNRNCKLLTSGLLSLTAEHRVLLTGTPLQNNIEELYSLLNFLEPEQFYSSSAFLEQ 1203
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
FGQ +TE +V +LQ +LKPMMLRRLKEDVEK++ PKEET++E++L+N QKKYYR ILERN
Sbjct: 1204 FGQCQTEDQVQRLQDILKPMMLRRLKEDVEKTLQPKEETIIEIQLSNTQKKYYRAILERN 1263
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FS L KGT+ VP+LMN MMELRKCC HP+L++G
Sbjct: 1264 FSHLCKGTS---VPSLMNAMMELRKCCNHPFLISG 1295
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 91/145 (62%), Gaps = 21/145 (14%)
Query: 2 SLIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
SL KPK P ASDW K+ + +K++N LR YQ EG+NWL++ ++N
Sbjct: 975 SLKVKPKLHPSASDWSKIPEDITFKDNNRLREYQFEGVNWLLYCYYN------------- 1021
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT 121
+NCILADEMGLGKT+Q++ F+ V+ GI GPFL++ PLSTI NWQREFE WT
Sbjct: 1022 ------KQNCILADEMGLGKTVQTICFLQRVYDYGIHGPFLIVVPLSTIHNWQREFETWT 1075
Query: 122 DLNVIVYHATFVV--LLQTGSKFFR 144
D+N IVYH + ++Q ++R
Sbjct: 1076 DMNTIVYHGSAASRQIIQQTEFYYR 1100
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 139 GSKFFRICLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
G IC F+ V+ GI GPFL++ PLSTI NWQREFE WTD+N IVYHG
Sbjct: 1034 GKTVQTIC---FLQRVYDYGIHGPFLIVVPLSTIHNWQREFETWTDMNTIVYHG 1084
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 16/80 (20%)
Query: 192 GRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLA 251
G RKK RR+ E R +A +++SE FK+E+ L FGWGRWK
Sbjct: 1628 GDRKK--RREDEEYRPDELA--------------FNKSEYFKIEKVLGQFGWGRWKVMRE 1671
Query: 252 NNEFRNGWTEEYVEELARLL 271
++ ++ TE +E ++R L
Sbjct: 1672 ASDLKDSVTEIDIEHISRTL 1691
>gi|348583619|ref|XP_003477570.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 9-like [Cavia porcellus]
Length = 2878
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 132/211 (62%), Positives = 163/211 (77%), Gaps = 5/211 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+ +ITTFE+I + K + C+I H
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRVQAIITTFEMIXA---AEKSTHXMRCVIMMKHI 998
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
+K NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 999 VKKXNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1058
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1059 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1118
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1119 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1149
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 106/165 (64%), Gaps = 29/165 (17%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N
Sbjct: 838 ERPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------R 878
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMG GKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VY
Sbjct: 879 RNCILADEMGXGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVY 938
Query: 129 HATFVV--LLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + + ++Q +FR D+ + IRG + V A ++T
Sbjct: 939 HGSLISRQMIQQYEMYFR-------DSQGRI-IRGAYRVQAIITT 975
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1487 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNERDVEVICRAL 1532
>gi|449672665|ref|XP_004207764.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like,
partial [Hydra magnipapillata]
Length = 2394
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/214 (61%), Positives = 169/214 (78%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ SR +Q+YE+ ++++ + I +YKF +ITT+E++++ L +R IIDE
Sbjct: 359 SAQSRLHIQQYEMRYKDENGEDITS--IYKFEAIITTYEMVLNANSFLCTIPFRCLIIDE 416
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN+ CKL+EGL L +EHRVLL+GTPLQNNV ELFSLLNF+EP +F + AF+ EF
Sbjct: 417 AHRLKNQKCKLMEGLNNLQMEHRVLLTGTPLQNNVEELFSLLNFVEPTRFPSQAAFLFEF 476
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDV ++IA KEET+VEVELT IQKK+YR ILE+NF
Sbjct: 477 GNLKTEGQVAKLQEILKPMMLRRLKEDVAQNIASKEETIVEVELTTIQKKFYRAILEKNF 536
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SFL+KG +N+PNLMNTMMELRKCC HP+L+NG
Sbjct: 537 SFLAKGAGYSNLPNLMNTMMELRKCCNHPFLING 570
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 80/122 (65%), Gaps = 19/122 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P +W SPVYKN N L YQLEGLNWL F W+ K I
Sbjct: 257 RPIDVEWKPYTVSPVYKNGNKLHDYQLEGLNWLTFCWY--------------KRI----- 297
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS++ + A+ + GIRGPFLVIAPLSTI NWQREFE WTD+N IVYH
Sbjct: 298 NCILADEMGLGKTIQSISLLCAIKQYGIRGPFLVIAPLSTIVNWQREFEEWTDINAIVYH 357
Query: 130 AT 131
+
Sbjct: 358 GS 359
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 7/68 (10%)
Query: 153 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAA 212
A+ + GIRGPFLVIAPLSTI NWQREFE WTD+N IVYHG + RL ++
Sbjct: 319 AIKQYGIRGPFLVIAPLSTIVNWQREFEEWTDINAIVYHGSA-------QSRLHIQQYEM 371
Query: 213 DYVPKDGE 220
Y ++GE
Sbjct: 372 RYKDENGE 379
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
W+R ECFKVE+ LL +GW RW+E +++ FR +E +AR +
Sbjct: 921 WTRVECFKVEKNLLIYGWARWQEIISHAHFRQDMHHSDIEAIARTI 966
>gi|49022903|dbj|BAC41410.3| mKIAA0308 protein [Mus musculus]
Length = 1890
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/170 (74%), Positives = 144/170 (84%)
Query: 339 CLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNF 398
C EL +WR IIDEAHRLKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+F
Sbjct: 3 CGELNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHF 62
Query: 399 LEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVEL 458
LEP +F + FM EFG LKTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVEL
Sbjct: 63 LEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVEL 122
Query: 459 TNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
TNIQKKYYR ILE+NFSFLSKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 123 TNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 172
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G + R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 508 GGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEVICRAL 555
>gi|393911475|gb|EJD76323.1| associated with TFs and helicase family protein [Loa loa]
Length = 2724
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 129/215 (60%), Positives = 174/215 (80%), Gaps = 5/215 (2%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+++SR ++Q+ E +R ++ + K +++ KF LITTFE+++SDC LK ++++CIIDE
Sbjct: 1155 SASSRQIIQQTEFCYRPEELKGGK-RNIVKFDALITTFEMVVSDCDILKQISYQVCIIDE 1213
Query: 355 AHRLKNRNCKLLEGLRLLH-LEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
AHRLKNRNCKLL L +EHRVLL+GTPLQNN+ EL+SLLNFLEP+QF ++ AF+ +
Sbjct: 1214 AHRLKNRNCKLLTSGLLSLTVEHRVLLTGTPLQNNIEELYSLLNFLEPEQFHSSSAFLEQ 1273
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
FGQ +TE +V +LQ +LKPMMLRRLKEDVEK++ PKEET++E++L+N QKKYYR ILERN
Sbjct: 1274 FGQCQTEDQVQRLQDILKPMMLRRLKEDVEKTLQPKEETIIEIQLSNTQKKYYRAILERN 1333
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FS L KGT+ VP+LMN MMELRKCC HP+L++G
Sbjct: 1334 FSHLCKGTS---VPSLMNAMMELRKCCNHPFLISG 1365
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 83/126 (65%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
KPK P ASDW K+ + +K++N LR YQ EG+NWL++ ++N
Sbjct: 1049 KPKPHPSASDWCKIPEDITFKDNNRLREYQFEGVNWLLYCYYN----------------- 1091
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
+NCILADEMGLGKT+Q++ F+ V+ GI GPFL++ PLSTI NWQREFE WTD+N
Sbjct: 1092 --KQNCILADEMGLGKTVQTICFLQRVYDYGIHGPFLIVVPLSTIHNWQREFETWTDMNT 1149
Query: 126 IVYHAT 131
IVYH +
Sbjct: 1150 IVYHGS 1155
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 139 GSKFFRICLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
G IC F+ V+ GI GPFL++ PLSTI NWQREFE WTD+N IVYHG
Sbjct: 1104 GKTVQTIC---FLQRVYDYGIHGPFLIVVPLSTIHNWQREFETWTDMNTIVYHG 1154
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 194 RKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLANN 253
RK+ R+ + RL+ +Y P + +++SE FK+E+ L FGWGRWK +
Sbjct: 1691 RKRSDRKGDRKKRLE--DEEYRPDELA-----FNKSEYFKIEKVLGQFGWGRWKVMREAS 1743
Query: 254 EFRNGWTEEYVEELARLL 271
+ ++ TE +E ++R L
Sbjct: 1744 DLKDNVTEIDIEHISRTL 1761
>gi|312069501|ref|XP_003137711.1| helicase [Loa loa]
Length = 1364
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 173/214 (80%), Gaps = 5/214 (2%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+++SR ++Q+ E +R ++ + K +++ KF LITTFE+++SDC LK ++++CIIDE
Sbjct: 1155 SASSRQIIQQTEFCYRPEELKGGK-RNIVKFDALITTFEMVVSDCDILKQISYQVCIIDE 1213
Query: 355 AHRLKNRNCKLLEGLRLLH-LEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
AHRLKNRNCKLL L +EHRVLL+GTPLQNN+ EL+SLLNFLEP+QF ++ AF+ +
Sbjct: 1214 AHRLKNRNCKLLTSGLLSLTVEHRVLLTGTPLQNNIEELYSLLNFLEPEQFHSSSAFLEQ 1273
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
FGQ +TE +V +LQ +LKPMMLRRLKEDVEK++ PKEET++E++L+N QKKYYR ILERN
Sbjct: 1274 FGQCQTEDQVQRLQDILKPMMLRRLKEDVEKTLQPKEETIIEIQLSNTQKKYYRAILERN 1333
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
FS L KGT+ VP+LMN MMELRKCC HP+L++
Sbjct: 1334 FSHLCKGTS---VPSLMNAMMELRKCCNHPFLIS 1364
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 83/126 (65%), Gaps = 19/126 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
KPK P ASDW K+ + +K++N LR YQ EG+NWL++ ++N
Sbjct: 1049 KPKPHPSASDWCKIPEDITFKDNNRLREYQFEGVNWLLYCYYN----------------- 1091
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
+NCILADEMGLGKT+Q++ F+ V+ GI GPFL++ PLSTI NWQREFE WTD+N
Sbjct: 1092 --KQNCILADEMGLGKTVQTICFLQRVYDYGIHGPFLIVVPLSTIHNWQREFETWTDMNT 1149
Query: 126 IVYHAT 131
IVYH +
Sbjct: 1150 IVYHGS 1155
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 139 GSKFFRICLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
G IC F+ V+ GI GPFL++ PLSTI NWQREFE WTD+N IVYHG
Sbjct: 1104 GKTVQTIC---FLQRVYDYGIHGPFLIVVPLSTIHNWQREFETWTDMNTIVYHG 1154
>gi|355678754|gb|AER96205.1| chromodomain helicase DNA binding protein 9 [Mustela putorius furo]
Length = 702
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 123/162 (75%), Positives = 140/162 (86%)
Query: 347 WRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSN 406
WR IIDEAHRLKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F +
Sbjct: 2 WRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPS 61
Query: 407 NEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYY 466
FM EFG LKTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYY
Sbjct: 62 ESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYY 121
Query: 467 RGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
R ILE+NFSFLSKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 122 RAILEKNFSFLSKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 163
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 501 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 546
>gi|47209275|emb|CAF89705.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2968
Score = 258 bits (658), Expect = 7e-66, Method: Composition-based stats.
Identities = 125/243 (51%), Positives = 162/243 (66%), Gaps = 42/243 (17%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE+++R+ + + IK Y+FH +ITTFE+I++DC EL+ WR +IDE
Sbjct: 1048 SQASRKTIQAYEMYYRDAQGKAIK--GAYRFHAIITTFEMILADCPELRSIPWRCVVIDE 1105
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ +EH+VLL+GTPLQN V ELFSLLNFLEP++F + + FM+EF
Sbjct: 1106 AHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPERFPSEQTFMTEF 1165
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++E +G L+
Sbjct: 1166 GDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIE-----------KGFLDGAV 1214
Query: 475 SFLSKGTTSAN-----------------------------VPNLMNTMMELRKCCIHPYL 505
L G + VPNL+NTMMELRKCC HPYL
Sbjct: 1215 LLLLGGANQHSEEVLPGHSGRRTSHSSPKGGSGGGGGGSSVPNLLNTMMELRKCCNHPYL 1274
Query: 506 LNG 508
+NG
Sbjct: 1275 ING 1277
Score = 157 bits (398), Expect = 1e-35, Method: Composition-based stats.
Identities = 80/162 (49%), Positives = 100/162 (61%), Gaps = 25/162 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P A+DW KLE S Y+N N LR YQLEGLNWL F+W+N +R
Sbjct: 946 RPLAADWKKLESSREYRNGNALREYQLEGLNWLTFNWYN-------------------SR 986
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ ++ I GPFLVIAPLSTIPNW+REF WT LNV+VYH
Sbjct: 987 NCILADEMGLGKTIQSITFLYEMYMKSIEGPFLVIAPLSTIPNWEREFRTWTQLNVVVYH 1046
Query: 130 ATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
+ Q K + ++ DA K I+G + A ++T
Sbjct: 1047 GS-----QASRKTIQAYEMYYRDAQGK-AIKGAYRFHAIITT 1082
Score = 73.2 bits (178), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ ++ I GPFLVIAPLSTIPNW+REF WT LNV+VYHG + SR+ + + Y
Sbjct: 1005 FLYEMYMKSIEGPFLVIAPLSTIPNWEREFRTWTQLNVVVYHG--SQASRKTIQAYEMYY 1062
Score = 55.8 bits (133), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ RSECF+VE+ LL +GWGRW + LA+ F+ E VE + R L
Sbjct: 1662 YPRSECFRVEKNLLVYGWGRWSDILAHGRFKRPMKESDVETICRAL 1707
>gi|281203782|gb|EFA77978.1| myb domain-containing protein [Polysphondylium pallidum PN500]
Length = 2536
Score = 247 bits (631), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 160/211 (75%), Gaps = 4/211 (1%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+R ++++YE ++ + K + ++ KF+ LITT+E++ISD +L +WR +IDEAHR
Sbjct: 524 ARPIIRDYEFYYTDSKG---RTTNVTKFNTLITTYEMVISDRAQLSKIHWRYLVIDEAHR 580
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN++CKL LR +H +LL+GTPLQNN EL+SLLNF+EP++F++ E F+ EFG L
Sbjct: 581 LKNKSCKLTNELRTYKYDHLLLLTGTPLQNNTQELWSLLNFMEPEKFAHLEEFLEEFGDL 640
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
K +V KLQ +L+P +LRR+KE+VEKSIAPKEET+VEVELT IQKKYYR I E+NF+FL
Sbjct: 641 KQAEQVTKLQEVLRPYLLRRMKENVEKSIAPKEETIVEVELTTIQKKYYRAIYEKNFTFL 700
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KG N P+L+N MMELRKCC HPYL+ G
Sbjct: 701 RKG-GKGNGPSLLNIMMELRKCCNHPYLIKG 730
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 76/122 (62%), Gaps = 21/122 (17%)
Query: 10 KPPASDWVKLEKSPVY-KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
+P S W + SP Y K LR YQL+GLNWL F W+ RN IL DEMGL
Sbjct: 417 RPAPSGWKEFTASPEYFKKGRLLRPYQLQGLNWLSFCWYQKRNSILGDEMGL-------- 468
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIV 127
GKT+QS++ ++ + KT GIRGPFL +APL+TIP+W+REFE+WTD V+V
Sbjct: 469 -----------GKTVQSVSIIETLRKTQGIRGPFLCVAPLTTIPHWKREFESWTDQKVLV 517
Query: 128 YH 129
YH
Sbjct: 518 YH 519
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 31/34 (91%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 191
GIRGPFL +APL+TIP+W+REFE+WTD V+VYH
Sbjct: 486 GIRGPFLCVAPLTTIPHWKREFESWTDQKVLVYH 519
>gi|440792199|gb|ELR13427.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 2160
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 162/214 (75%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+SA+R ++++YE + + K + I L+K++VL+TT+E+I++D LK +WR +IDE
Sbjct: 397 SSAAREVIRKYEWNYLDAKGRAIP--GLFKWNVLVTTYEMILADSALLKTIDWRYTVIDE 454
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN+N KLL L+ +LL+GTPLQNN EL+SLLNFL+P++F ++E FM++F
Sbjct: 455 AHRLKNKNSKLLIELQTYSFSDILLLTGTPLQNNTEELWSLLNFLDPEKFHSSEDFMTDF 514
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LK +V L LLKP +LRR+KE VEKSIAPKEET+VEVELT QKKYY+ I E+N
Sbjct: 515 GDLKQTQQVQGLHDLLKPHLLRRMKEHVEKSIAPKEETIVEVELTVTQKKYYKAIYEKNT 574
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FL+KG + NVPN++N MM+LRKCC HPYL+NG
Sbjct: 575 AFLTKGCSGGNVPNMLNIMMQLRKCCNHPYLING 608
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 85/126 (67%), Gaps = 18/126 (14%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++P A +W + +SP +K+ N LRAYQLEGLNWL+F+W+ RN ILADEMGLGKT+QS++
Sbjct: 293 ERPDAEEWREYTESPEFKDGNRLRAYQLEGLNWLVFNWYQRRNSILADEMGLGKTVQSIS 352
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
T+ L V+ IRGPFLVIAPLSTI +W+RE E WTD+NVIVY
Sbjct: 353 -------------TMWHLFTVEK-----IRGPFLVIAPLSTIGHWKREVENWTDMNVIVY 394
Query: 129 HATFVV 134
H +
Sbjct: 395 HGSSAA 400
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 31/34 (91%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
IRGPFLVIAPLSTI +W+RE E WTD+NVIVYHG
Sbjct: 363 IRGPFLVIAPLSTIGHWKREVENWTDMNVIVYHG 396
>gi|328768321|gb|EGF78368.1| hypothetical protein BATDEDRAFT_35805 [Batrachochytrium
dendrobatidis JAM81]
Length = 1991
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 164/215 (76%), Gaps = 3/215 (1%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ++RN++ E E ++R++ + + D+ KF +++TT+E+ +S +L+ WR ++DE
Sbjct: 411 SQSARNLIVETEYYYRDETGEIVS--DMLKFDIVLTTYEMAMSGASQLRPIPWRCVVLDE 468
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN++ K+ E L+ +EHRVLL+GTPLQN+++EL++LLNFLEP +F++ F +
Sbjct: 469 AHRLKNKSSKVTEILKTYTMEHRVLLTGTPLQNSLDELWALLNFLEPHKFASETDFRLNY 528
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + ++V KLQ +LKP+MLRRLKEDVEKSI KEET+VEVELT QKK+YR ILE+NF
Sbjct: 529 ASLNSAADVEKLQNVLKPLMLRRLKEDVEKSIPVKEETIVEVELTTTQKKWYRSILEKNF 588
Query: 475 SFLSKGT-TSANVPNLMNTMMELRKCCIHPYLLNG 508
S+L +GT NVPNL+NTM+ELRKCCIHP+LL G
Sbjct: 589 SWLKQGTLKKTNVPNLINTMIELRKCCIHPWLLKG 623
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 84/121 (69%), Gaps = 20/121 (16%)
Query: 12 PASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNC 71
PA WVKLE SP+YKNDN LR+YQLEGL+WLMF W+N +N ILADEMG
Sbjct: 310 PACCWVKLEDSPIYKNDNMLRSYQLEGLDWLMFCWYNKQNSILADEMG------------ 357
Query: 72 ILADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
LGKT+QS F+ +F + +RGPFL++ PLSTI NW+RE +AWTD+NV+VYH
Sbjct: 358 -------LGKTVQSTVFLYQLFLQENLRGPFLIVTPLSTIGNWEREIKAWTDMNVVVYHG 410
Query: 131 T 131
+
Sbjct: 411 S 411
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRR 194
F + +RGPFL++ PLSTI NW+RE +AWTD+NV+VYHG +
Sbjct: 367 FLYQLFLQENLRGPFLIVTPLSTIGNWEREIKAWTDMNVVVYHGSQ 412
>gi|330796151|ref|XP_003286132.1| hypothetical protein DICPUDRAFT_150076 [Dictyostelium purpureum]
gi|325083877|gb|EGC37318.1| hypothetical protein DICPUDRAFT_150076 [Dictyostelium purpureum]
Length = 2186
Score = 241 bits (616), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 153/212 (72%), Gaps = 3/212 (1%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
A R +L+ YE +F K++ K ++ KF+VLITT+E+ ISD L W+ +IDEAH
Sbjct: 576 AGRPILRNYEFYF---KDKSGKPTNVVKFNVLITTYEMAISDRSYLSKIKWKYLVIDEAH 632
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN+ CKL L+ H +H +LL+GTPLQNN EL++LLNFLEP +F+ F+ EFG
Sbjct: 633 RLKNKQCKLTSELKTYHFDHLLLLTGTPLQNNTQELWALLNFLEPSKFNKLAEFLVEFGD 692
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LK +V+KLQ LLKP +LRR+KE VEKSIAPKEET+VEVELT +QKKYYR I E+NF+F
Sbjct: 693 LKQAEQVSKLQNLLKPYLLRRMKERVEKSIAPKEETIVEVELTMVQKKYYRAIYEKNFAF 752
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L K P+L+N MMELRKCC HPYL+ G
Sbjct: 753 LRKNCKGQQGPSLLNIMMELRKCCNHPYLIKG 784
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 82/126 (65%), Gaps = 21/126 (16%)
Query: 8 KKKPPASDWVKLEKSPVY-KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQS 66
K +PPAS W +L +SP Y N LR YQLEGLNWL + WFN RN IL DEMGL
Sbjct: 468 KPRPPASQWKELTESPSYFLKGNKLRPYQLEGLNWLRYCWFNQRNSILGDEMGL------ 521
Query: 67 LTRNCILADEMGLGKTIQSLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
GKT+QS++ ++ + K IRGPFLV+APL+TIP+W+REFE WTD+N
Sbjct: 522 -------------GKTVQSVSILETLRKAHDIRGPFLVVAPLTTIPHWKREFENWTDMNS 568
Query: 126 IVYHAT 131
+VYH T
Sbjct: 569 LVYHDT 574
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/33 (75%), Positives = 31/33 (93%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 191
IRGPFLV+APL+TIP+W+REFE WTD+N +VYH
Sbjct: 540 IRGPFLVVAPLTTIPHWKREFENWTDMNSLVYH 572
>gi|66813908|ref|XP_641133.1| myb domain-containing protein [Dictyostelium discoideum AX4]
gi|60469158|gb|EAL67154.1| myb domain-containing protein [Dictyostelium discoideum AX4]
Length = 2373
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 154/220 (70%), Gaps = 7/220 (3%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEK------DLYKFHVLITTFEIIISDCLELKDFNWR 348
+ A R + + YE + + DK+ + KF+VLITT+E+ I+D L W+
Sbjct: 591 SGAGRPICRNYEFYLK-DKDGGGGGASGGASGKITKFNVLITTYEMAITDRTHLSRIPWK 649
Query: 349 LCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNE 408
+IDEAHRLKN++CKL LR +H +LL+GTPLQNN EL+SLLNFL+P+QFSN +
Sbjct: 650 YLVIDEAHRLKNKSCKLTIELRSYSFDHLLLLTGTPLQNNTQELWSLLNFLDPKQFSNLD 709
Query: 409 AFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRG 468
F+ E+G LK S+V LQ +LKP +LRR+KE VEKSIAPKEET+VEVELT +QKKYYR
Sbjct: 710 QFLLEYGDLKESSQVESLQAILKPYLLRRMKERVEKSIAPKEETIVEVELTTVQKKYYRA 769
Query: 469 ILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
I E+NFSFL KG S P+L+N MMELRKCC HPYL G
Sbjct: 770 IYEKNFSFLRKGGKSNQGPSLLNIMMELRKCCNHPYLTKG 809
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 82/128 (64%), Gaps = 21/128 (16%)
Query: 6 KPKKKPPASDWVKLEKSPVY-KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
+ K +PP + W K+++SP Y N LR YQLEGLNWL F W
Sbjct: 483 RDKPRPPRTAWKKIDQSPDYFTKGNKLRPYQLEGLNWLSFCWHE---------------- 526
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWTDL 123
RN IL DEMGLGKT+QS++ ++ + K GIRGPFLV+APL+TIP+W+REFE WTD+
Sbjct: 527 ---QRNSILGDEMGLGKTVQSVSILETLRKVHGIRGPFLVVAPLTTIPHWKREFENWTDM 583
Query: 124 NVIVYHAT 131
N +VYH +
Sbjct: 584 NALVYHDS 591
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 32/34 (94%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 191
GIRGPFLV+APL+TIP+W+REFE WTD+N +VYH
Sbjct: 556 GIRGPFLVVAPLTTIPHWKREFENWTDMNALVYH 589
>gi|440790347|gb|ELR11630.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 2175
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 158/214 (73%), Gaps = 3/214 (1%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIII-SDCLELKDFNWRLCIIDE 354
+A+R +++EYE +++ + + +KF+VL+TT+E+I+ +D EL NW+ IIDE
Sbjct: 835 AANRTVIREYEWYYQGQGQK--RAPGQFKFNVLLTTYEMILRTDWAELSKINWKALIIDE 892
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN+ KLLE L+L +HR++L+GTPLQNN EL++LLNF+EP F++ +F+ F
Sbjct: 893 AHRLKNKRSKLLERLKLFKTDHRIILTGTPLQNNTEELWTLLNFIEPHIFTSLPSFLQNF 952
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LK +V L +L+P +LRRLKEDVE SI PKEE +VEVELT++QKKYYR ILERN
Sbjct: 953 GDLKDAEQVGHLHTVLRPHLLRRLKEDVESSIPPKEEVLVEVELTSLQKKYYRAILERNR 1012
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FL+KG + NVPNL+N +M+LRK C HP+L+ G
Sbjct: 1013 EFLNKGCSGGNVPNLINVVMQLRKVCNHPFLIQG 1046
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 74/120 (61%), Gaps = 21/120 (17%)
Query: 12 PASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNC 71
P S W L P +KNDN LR YQLEGLNWL++ W+N R ILADEMGLG
Sbjct: 734 PISQWAPL-NDPTFKNDNKLRKYQLEGLNWLVYCWYNRRGSILADEMGLG---------- 782
Query: 72 ILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
KT+QS+TF++ + + I GPFL++ PLST+P+W RE E WT++N I+Y
Sbjct: 783 ---------KTVQSITFLEYLHRNQYIHGPFLIVCPLSTLPHWIRELEGWTEMNGIIYQG 833
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 27/34 (79%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
I GPFL++ PLST+P+W RE E WT++N I+Y G
Sbjct: 800 IHGPFLIVCPLSTLPHWIRELEGWTEMNGIIYQG 833
>gi|325181644|emb|CCA16095.1| KIAA1416 protein putative [Albugo laibachii Nc14]
Length = 1788
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 157/218 (72%), Gaps = 1/218 (0%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ +R +++EYE +F N+ + K+K ++FH+++TT+E+ I D L WR I+DEA
Sbjct: 526 TEAREVIREYEFYFMNENGKPDKKKP-FRFHIIVTTYEVAIKDIAFLSKIRWRCLIVDEA 584
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN++ +L+E LR L +H VLL+GTPLQN EL++LLNFL+ + F + E F+ +FG
Sbjct: 585 HRLKNQSSRLVEQLRSLRRDHCVLLTGTPLQNKTEELWALLNFLDTRSFPSVEEFLDKFG 644
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
L +V L +LKP +LRR+KEDVEKS+ PKEET++EVELT +QK++YR I E+N S
Sbjct: 645 DLHQARQVADLHKMLKPYLLRRVKEDVEKSLPPKEETIIEVELTPVQKQWYRAIYEKNTS 704
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTYLL 513
FLS+G N+PNLMN MMELRKCC HPYL NG +L
Sbjct: 705 FLSRGGNPNNIPNLMNVMMELRKCCNHPYLNNGVEEIL 742
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 76/127 (59%), Gaps = 18/127 (14%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTL--RAYQLEGLNWLMFSWFNGRNCILADEMGLGKT 63
+P +P ++ KLE SP + D +L R YQLEGLNWL+++W+N R ILADEMGLGKT
Sbjct: 414 EPLPRPSLREYRKLEASPSFGIDGSLQLRIYQLEGLNWLLWNWYNERPSILADEMGLGKT 473
Query: 64 IQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDL 123
IQ+L D + + IQ RGPFL++APLS I WQ E E WT +
Sbjct: 474 IQTLA----FLDRLRVDPKIQ------------CRGPFLIVAPLSLIVQWQNECETWTCM 517
Query: 124 NVIVYHA 130
N IVYH
Sbjct: 518 NCIVYHG 524
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 26/37 (70%)
Query: 156 KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
K RGPFL++APLS I WQ E E WT +N IVYHG
Sbjct: 488 KIQCRGPFLIVAPLSLIVQWQNECETWTCMNCIVYHG 524
>gi|328867660|gb|EGG16042.1| myb domain-containing protein [Dictyostelium fasciculatum]
Length = 1999
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/211 (54%), Positives = 155/211 (73%), Gaps = 5/211 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+R ++++E F+ K ++ KF+ LITT+E+IISD L NW+ +IDEAHR
Sbjct: 547 ARQTIRDHEFFYPT--ANNKKNNNVTKFNTLITTYEMIISDRSFLSKINWKYVVIDEAHR 604
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN++C+L LR + H +LL+GTP+QNN EL+SLLNFL+P++F++ + F+ EFG L
Sbjct: 605 LKNKSCRLTNELRTYNYGHLLLLTGTPIQNNTQELWSLLNFLQPEKFASCDEFLVEFGDL 664
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
K +V KLQ +LKP +LRR+KE+VEKSIAPKEET+VEVELT +QKKYYR I E+NFSFL
Sbjct: 665 KQAEQVTKLQAVLKPYILRRMKENVEKSIAPKEETIVEVELTTVQKKYYRAIYEKNFSFL 724
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KG P+L+N MMELRKCC HPYL+ G
Sbjct: 725 RKG---GKGPSLLNIMMELRKCCNHPYLIKG 752
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 83/125 (66%), Gaps = 19/125 (15%)
Query: 8 KKKPPASDWVKLEKSPVY-KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQS 66
K++PPAS W + +SP Y KN N LR YQLEGLNWL F W RN +L DEMGLGKT+QS
Sbjct: 438 KERPPASAWKESAESPSYFKNGNKLRPYQLEGLNWLSFCWHQRRNSMLGDEMGLGKTVQS 497
Query: 67 LTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVI 126
++ I++L V GIRGPFL IAPL+TIP+W+REFEAWT +V+
Sbjct: 498 VS-------------IIETLRSVH-----GIRGPFLCIAPLTTIPHWKREFEAWTTQSVL 539
Query: 127 VYHAT 131
VYH T
Sbjct: 540 VYHDT 544
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 31/34 (91%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 191
GIRGPFL IAPL+TIP+W+REFEAWT +V+VYH
Sbjct: 509 GIRGPFLCIAPLTTIPHWKREFEAWTTQSVLVYH 542
>gi|320169022|gb|EFW45921.1| chromodomain-helicase-DNA-binding protein 7 [Capsaspora owczarzaki
ATCC 30864]
Length = 2669
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/213 (54%), Positives = 151/213 (70%), Gaps = 3/213 (1%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEK--DLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+R ++ E+E+F R DK K K F ++TT+E + +L W+ IIDEA
Sbjct: 991 ARRVISEFEMFDR-DKAGMGKAKLVQHLSFDAILTTYESTLQGVDDLGRIPWKCVIIDEA 1049
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HR+KN +L E LR + H VLL+GTPLQN+V EL+SLLNFL PQ +S+ + F+ +FG
Sbjct: 1050 HRMKNAKARLSETLRAFTINHSVLLTGTPLQNHVEELWSLLNFLSPQDYSSKKMFLEQFG 1109
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
LKTE +V LQ LL+P+MLRRLK DVEKSIAPKEET++EVELT IQKKYY+ IL RNF
Sbjct: 1110 DLKTEQQVLALQGLLRPIMLRRLKGDVEKSIAPKEETIIEVELTPIQKKYYQAILGRNFE 1169
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FL+KG ++P+LMN +MELRKCC HPYL+ G
Sbjct: 1170 FLAKGCNKNDMPSLMNIVMELRKCCNHPYLIGG 1202
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 75/118 (63%), Gaps = 19/118 (16%)
Query: 13 ASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCI 72
A D L+ ++N NTLR+YQ EG+NWL F + S R+CI
Sbjct: 889 AVDLKLLDAKVTFENGNTLRSYQYEGVNWLRFCY-------------------SQCRSCI 929
Query: 73 LADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
LADEMGLGKT+QS+TF+ ++ GPFLVIAPLST+PNWQREF WTDLNVIVYH
Sbjct: 930 LADEMGLGKTVQSITFLKSLKNATGSGPFLVIAPLSTLPNWQREFAEWTDLNVIVYHG 987
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/40 (82%), Positives = 35/40 (87%), Gaps = 2/40 (5%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
GPFLVIAPLST+PNWQREF WTDLNVIVYHG K L+RR
Sbjct: 956 GPFLVIAPLSTLPNWQREFAEWTDLNVIVYHG--KPLARR 993
>gi|384499162|gb|EIE89653.1| hypothetical protein RO3G_14364 [Rhizopus delemar RA 99-880]
Length = 1532
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/218 (53%), Positives = 158/218 (72%), Gaps = 3/218 (1%)
Query: 292 LKSASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
+ + +R+++ E E + + + I K YKF VLITT+E + LKD WR +
Sbjct: 512 FRGSHTARSLIIETEFNYLDMEGNPIPGK--YKFDVLITTYETASASAATLKDIPWRCGV 569
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
DEAHRLKN+N K+LE LR +++H++LL+GTPLQNN+ EL+SLL+F+ P + + + F
Sbjct: 570 FDEAHRLKNKNSKVLEVLRTFYIDHKLLLTGTPLQNNLGELYSLLHFMAPHIYDDEKYFF 629
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
SE+G L + EV KLQ LLKP+MLRR KEDVEK+I KEETV+EVELTN QKK+YR ILE
Sbjct: 630 SEYGNLNSAHEVEKLQALLKPIMLRRFKEDVEKTIPVKEETVIEVELTNPQKKWYRAILE 689
Query: 472 RNFSFLSKGT-TSANVPNLMNTMMELRKCCIHPYLLNG 508
+NF+FL +G+ + ++P+L N MM+LRKCCIHPYLL G
Sbjct: 690 KNFTFLKRGSKNNKDMPHLRNIMMQLRKCCIHPYLLEG 727
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 79/125 (63%), Gaps = 18/125 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P + +++ + SPVYK +N+LR YQLEGLNWL + +++ R+CILADEMGLGKT+QS+
Sbjct: 412 RPDVTRFIQYDSSPVYKYNNSLRPYQLEGLNWLRYCYYSFRSCILADEMGLGKTVQSVA- 470
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
D GIRGPFL+IAPLSTIP+W R F AWTDLN++ +
Sbjct: 471 -----------------LLNDIYHHIGIRGPFLIIAPLSTIPHWTRAFGAWTDLNIVDFR 513
Query: 130 ATFVV 134
+
Sbjct: 514 GSHTA 518
>gi|384493781|gb|EIE84272.1| hypothetical protein RO3G_08982 [Rhizopus delemar RA 99-880]
Length = 1416
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/217 (53%), Positives = 157/217 (72%), Gaps = 3/217 (1%)
Query: 293 KSASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
+ + +R ++ E E +++ + I K YKF VLITT+E+ + LKD WR +
Sbjct: 540 RGGNMARKLIMETEFNYQDLEGNPISGK--YKFDVLITTYEMASASAAILKDIPWRCGVF 597
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLKN+N K+LE LR +++H++LL+GTPLQNN+ EL+SLL+F+ P + + F S
Sbjct: 598 DEAHRLKNKNSKVLEVLRTFYIDHKLLLTGTPLQNNLGELYSLLHFMAPHIYDDENYFFS 657
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
E+G L + EV KLQ LLKP+MLRR KEDVEK+I KEETV+EVELTN QKK+YR ILE+
Sbjct: 658 EYGNLSSAHEVEKLQALLKPIMLRRFKEDVEKTIPVKEETVIEVELTNPQKKWYRAILEK 717
Query: 473 NFSFLSKG-TTSANVPNLMNTMMELRKCCIHPYLLNG 508
NF+FL +G + ++P+L N MM+LRKCCIHPYLL G
Sbjct: 718 NFTFLKRGLKNNKDMPHLRNIMMQLRKCCIHPYLLEG 754
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 78/122 (63%), Gaps = 18/122 (14%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++P + +V+ + SPVYK +NTLR YQLEGLNWL + ++ R+CILADEMGLGKT+QS+
Sbjct: 438 QRPDVTRFVQYDSSPVYKYENTLRPYQLEGLNWLRYCYYTFRSCILADEMGLGKTVQSVA 497
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
D GIRGPFL++APLSTIP+W R F AWTDLNV+ Y
Sbjct: 498 ------------------LLNDIYHHVGIRGPFLIVAPLSTIPHWTRAFGAWTDLNVVDY 539
Query: 129 HA 130
Sbjct: 540 RG 541
>gi|301122081|ref|XP_002908767.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora
infestans T30-4]
gi|262099529|gb|EEY57581.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora
infestans T30-4]
Length = 1788
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 113/218 (51%), Positives = 158/218 (72%), Gaps = 1/218 (0%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
SASR +++++E + +D+ + K K Y+F++L+TT+E+ I D L +WR ++DEA
Sbjct: 527 SASREIIRDFEFKYLDDQLRPDK-KRTYRFNILVTTYEVAIKDIAVLSKIHWRCLVVDEA 585
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN++ +L+E +R L +H VLL+GTPLQN EL++LLNFL+ + F + F+++FG
Sbjct: 586 HRLKNQSSRLVEQMRSLRRDHCVLLTGTPLQNKTEELWALLNFLDAKSFPSVSDFLAKFG 645
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
L +V L +LKP +LRR+KEDVEKS+ PKEET+VEVELT +QK++YR I ERN S
Sbjct: 646 DLHEAQQVADLHKMLKPYLLRRVKEDVEKSLPPKEETIVEVELTPVQKQWYRAIYERNTS 705
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTYLL 513
FL++G NVPNLMN MMELRKCC HPYL NG +L
Sbjct: 706 FLNRGGNPRNVPNLMNVMMELRKCCNHPYLNNGVEEIL 743
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 81/127 (63%), Gaps = 18/127 (14%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTL--RAYQLEGLNWLMFSWFNGRNCILADEMGLGKT 63
KP+ +P ++ KLE+SP + D +L RAYQLEGLNWL+++W+N R ILADEMGLGKT
Sbjct: 415 KPRPRPSIREYRKLEESPKFGEDQSLSLRAYQLEGLNWLLWNWYNERPSILADEMGLGKT 474
Query: 64 IQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDL 123
IQ+L+ +L D+ K IRGPFL++APLS I WQ E E WT +
Sbjct: 475 IQTLSFLNLLRDDP----------------KIKIRGPFLIVAPLSLIVQWQNECEMWTTM 518
Query: 124 NVIVYHA 130
N +VYH
Sbjct: 519 NCVVYHG 525
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 27/37 (72%)
Query: 156 KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
K IRGPFL++APLS I WQ E E WT +N +VYHG
Sbjct: 489 KIKIRGPFLIVAPLSLIVQWQNECEMWTTMNCVVYHG 525
>gi|348676368|gb|EGZ16186.1| hypothetical protein PHYSODRAFT_560689 [Phytophthora sojae]
Length = 1860
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 156/218 (71%), Gaps = 1/218 (0%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
S SR++++++E + D+N +K Y+F++L+TT+E+ I D L +WR ++DEA
Sbjct: 549 SGSRDIIRDFEFHYL-DENLRPDKKKPYRFNILVTTYEVAIKDIAALSKIHWRCLVVDEA 607
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN++ +L+E +R L +H VLL+GTPLQN EL++LLNFL+ + F + F+ +FG
Sbjct: 608 HRLKNQSSRLVEQMRSLRRDHCVLLTGTPLQNKTEELWALLNFLDGKSFPSVADFLDKFG 667
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
L +V L +LKP +LRR+KEDVEKS+ PKEET+VEVELT +QK++YR I E+N +
Sbjct: 668 DLHEAQQVADLHKMLKPYLLRRVKEDVEKSLPPKEETIVEVELTPVQKQWYRAIYEKNTA 727
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTYLL 513
FL++G NVPNLMN MMELRKCC HPYL NG +L
Sbjct: 728 FLNRGGNPRNVPNLMNVMMELRKCCNHPYLNNGVEEIL 765
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 93/161 (57%), Gaps = 25/161 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTL--RAYQLEGLNWLMFSWFNGRNCILADEMGLGKT 63
KP+ +P ++ KL++SP + D +L RAYQLEGLNWL+++W+N R ILADEMGLGKT
Sbjct: 437 KPRPRPTIREYRKLDESPRFGEDQSLSLRAYQLEGLNWLIWNWYNERPSILADEMGLGKT 496
Query: 64 IQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDL 123
IQ+L+ L D+ K IRGPFL++APLS I WQ E E WT +
Sbjct: 497 IQTLSFLSRLRDDP----------------KIKIRGPFLIVAPLSLIVQWQNECEMWTTM 540
Query: 124 NVIVYHATFVVLLQTGSKFFRICLEF-FVDAVFKTGIRGPF 163
N +VYH +GS+ EF ++D + + P+
Sbjct: 541 NCVVYHGN------SGSRDIIRDFEFHYLDENLRPDKKKPY 575
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 27/37 (72%)
Query: 156 KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
K IRGPFL++APLS I WQ E E WT +N +VYHG
Sbjct: 511 KIKIRGPFLIVAPLSLIVQWQNECEMWTTMNCVVYHG 547
>gi|452822657|gb|EME29674.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria
sulphuraria]
Length = 2042
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/213 (51%), Positives = 149/213 (69%), Gaps = 5/213 (2%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
S SR+++ +YE F ++ + YKF ++TT+E II D +L+ W + ++DEA
Sbjct: 511 SESRSIIHQYEWGFSDNP-----KGPPYKFVAIVTTYESIILDPGKLRSIEWEVMVVDEA 565
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKNR KL+E LR +HR+LL+GTP+QN+ E+++LLNFLEP +FS+ +F+S+F
Sbjct: 566 HRLKNRQAKLVEELRAFSTKHRILLTGTPIQNSSAEVWALLNFLEPSKFSDESSFLSKFA 625
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
++ K + +L+P MLRR KEDVEKSI PKEET++ VELT QKK+YR LE+NFS
Sbjct: 626 EISDSETAEKFREMLRPYMLRRQKEDVEKSIPPKEETIISVELTRTQKKWYRATLEQNFS 685
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FL KG S+NV NL N MELRKCC HPYL+ G
Sbjct: 686 FLEKGAKSSNVGNLHNIFMELRKCCNHPYLIKG 718
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 76/123 (61%), Gaps = 24/123 (19%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
+KP D+ ++ +KN LR YQ+EGL WL+ W C
Sbjct: 410 RKPSNFDYTQVS----FKNGGYLREYQMEGLKWLVSCW-----CKY-------------- 446
Query: 69 RNCILADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIV 127
+ ILADEMGLGKT+Q++ F+ ++ + IRGPFL+IAPLST+ +W+REFE+WTD+NV+V
Sbjct: 447 QGSILADEMGLGKTLQTVAFLQYLYIRERIRGPFLIIAPLSTVEHWKREFESWTDMNVVV 506
Query: 128 YHA 130
YH
Sbjct: 507 YHG 509
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 33/34 (97%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
IRGPFL+IAPLST+ +W+REFE+WTD+NV+VYHG
Sbjct: 476 IRGPFLIIAPLSTVEHWKREFESWTDMNVVVYHG 509
>gi|300708940|ref|XP_002996640.1| hypothetical protein NCER_100233 [Nosema ceranae BRL01]
gi|239605957|gb|EEQ82969.1| hypothetical protein NCER_100233 [Nosema ceranae BRL01]
Length = 1262
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/210 (53%), Positives = 155/210 (73%), Gaps = 8/210 (3%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
RNM+ EYE + ++ N+ + F V+ITT+E+I++ + FNW + I DEAHRL
Sbjct: 404 RNMIAEYEFYLKSATNK------VGLFDVMITTYEMIMAGFDHISQFNWAVGIFDEAHRL 457
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK 418
KN + K LR ++ H+VLLSGTPLQNN+ EL+SLLNF+ P +F+++ F+S++ +L+
Sbjct: 458 KNASSKAASTLRNVNFSHKVLLSGTPLQNNITELWSLLNFISPSEFNDSAKFLSDY-KLE 516
Query: 419 TESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS 478
++V KLQ LL+P+MLRR+KEDVEK+I KEET++EVELT IQK+YYR ILE+N FL+
Sbjct: 517 QAADVEKLQGLLRPLMLRRMKEDVEKTIPMKEETIIEVELTMIQKRYYRAILEKNLDFLT 576
Query: 479 KGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KG + PNL+N MMELRKCCIHPYL+ G
Sbjct: 577 KGHKDS-APNLLNAMMELRKCCIHPYLIKG 605
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 81/124 (65%), Gaps = 20/124 (16%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP +K E+SPV+K DN LR YQLEGLNWL+ W++ +CI+ADEMG
Sbjct: 297 RPPRELQIKFEESPVFKGDNKLREYQLEGLNWLLNRWYHKISCIMADEMG---------- 346
Query: 70 NCILADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
LGKT+QS+ FV+++F K GP L++APLST+ +W+REF AWTDL V++Y
Sbjct: 347 ---------LGKTVQSVVFVNSLFTKFNYNGPVLIVAPLSTLVHWEREFFAWTDLRVLIY 397
Query: 129 HATF 132
H +
Sbjct: 398 HGSI 401
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Query: 150 FVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV+++F K GP L++APLST+ +W+REF AWTDL V++YHG
Sbjct: 356 FVNSLFTKFNYNGPVLIVAPLSTLVHWEREFFAWTDLRVLIYHG 399
>gi|26333335|dbj|BAC30385.1| unnamed protein product [Mus musculus]
Length = 1104
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 106/164 (64%), Positives = 133/164 (81%), Gaps = 2/164 (1%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL +WR IIDEAHR
Sbjct: 943 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIDWRCVIIDEAHR 1000
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1001 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1060
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNI 461
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNI
Sbjct: 1061 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNI 1104
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+E+S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 838 RPPSNIWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 878
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 879 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 938
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 939 GSLISRQMIQQYEMYFR 955
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 897 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 939
>gi|167539947|ref|XP_001741453.1| chromodomain helicase hrp1 [Entamoeba dispar SAW760]
gi|165893990|gb|EDR22091.1| chromodomain helicase hrp1, putative [Entamoeba dispar SAW760]
Length = 1249
Score = 224 bits (571), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 109/215 (50%), Positives = 157/215 (73%), Gaps = 3/215 (1%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ +R +++ YE ++++ + + I KFHVL+TT+EI+ISD +L +W + ++DE
Sbjct: 384 SKGNRQLVKHYEWYYKDFQGKLIPGH--LKFHVLLTTYEIVISDWEDLSKISWLVTVVDE 441
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN++ KLL+ L + H+VLL+GTP+QNN+ EL++LLN++EP+ FS+ E F EF
Sbjct: 442 AHRLKNKDSKLLKALCNIQTNHKVLLTGTPIQNNLGELWTLLNYIEPKTFSSLEEFDHEF 501
Query: 415 GQL-KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
L K+ +VNKLQ +KP LRR+K +VEKSI PKEET++EVELT +QK+YYR + E+N
Sbjct: 502 NSLDKSAEQVNKLQESIKPFFLRRMKNEVEKSIPPKEETIIEVELTMVQKQYYRALYEKN 561
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FL+KG +NVPNL N MM+LRK C HPYL+ G
Sbjct: 562 REFLNKGCVGSNVPNLQNLMMQLRKVCNHPYLIPG 596
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 76/121 (62%), Gaps = 20/121 (16%)
Query: 12 PASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNC 71
P W K +SP YK+ NTLR+YQLEG NWL+F+W G+ CILADEMG
Sbjct: 283 PKRVWQKKVESPNYKHGNTLRSYQLEGHNWLVFNWCRGKGCILADEMG------------ 330
Query: 72 ILADEMGLGKTIQSLTFVDAVFK-TGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
LGKT+Q ++F++ ++ ++GPFL++ PLS I +W RE WTD+NV++YH
Sbjct: 331 -------LGKTVQVVSFLEHLYSFQKLQGPFLIVVPLSMIEHWHREILEWTDMNVVIYHG 383
Query: 131 T 131
+
Sbjct: 384 S 384
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRR 194
++GPFL++ PLS I +W RE WTD+NV++YHG +
Sbjct: 350 LQGPFLIVVPLSMIEHWHREILEWTDMNVVIYHGSK 385
>gi|440804253|gb|ELR25130.1| SNF2 family Nterminal domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1517
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 158/212 (74%), Gaps = 2/212 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+RN+++++E + + + + + LYKFHVLITTFE+++ + L + +W+ +IDE HR
Sbjct: 281 ARNLIRKHEFHYTDSRGRRVGGSGLYKFHVLITTFEMVLKETF-LGNIDWQYMVIDEGHR 339
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
+K++ KL + L + +H+++L+GTP+QN++ EL+++L+FL P++F + + F E+G L
Sbjct: 340 IKSKKTKLFQQLFQYNAQHKLILTGTPMQNHIEELWTMLHFLNPEEFDDVDEFKVEYGDL 399
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KT+ +V+KLQ L+P MLRR+KEDV+K+I KEET+VEVELT+ QKKYYR IL++N FL
Sbjct: 400 KTKEQVDKLQASLRPYMLRRMKEDVDKTIPLKEETIVEVELTSTQKKYYRAILDKNREFL 459
Query: 478 SKGTTS-ANVPNLMNTMMELRKCCIHPYLLNG 508
+G S +N+P L N +MELRKCC HPYL+ G
Sbjct: 460 YRGAKSNSNLPQLTNILMELRKCCNHPYLIAG 491
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 74/125 (59%), Gaps = 20/125 (16%)
Query: 8 KKKPPASDWVKLEKSPVYKNDN-TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQS 66
+ KP A D E P Y + N TLR YQ+EG+ WL++ W+ RN ILADEMGLGKT+QS
Sbjct: 173 RPKPSAFD-DDAEYVPNYSDPNLTLRDYQVEGIKWLVYCWYKRRNSILADEMGLGKTLQS 231
Query: 67 LTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVI 126
++ +Q L V + RGPFLV+AP+STI W+RE E T +N +
Sbjct: 232 VS-------------ILQYL-----VQEEENRGPFLVVAPMSTIEQWRREVEGRTFMNCV 273
Query: 127 VYHAT 131
V+H T
Sbjct: 274 VFHGT 278
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 160 RGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
RGPFLV+AP+STI W+RE E T +N +V+HG
Sbjct: 245 RGPFLVVAPMSTIEQWRREVEGRTFMNCVVFHG 277
>gi|390368989|ref|XP_003731564.1| PREDICTED: chromodomain-helicase-DNA-binding protein 9-like,
partial [Strongylocentrotus purpuratus]
Length = 882
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 147/216 (68%), Gaps = 47/216 (21%)
Query: 294 SASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIID 353
S SR+M+ EYE+FFR+ +K ++YKF +LITT+EI+++DC EL + WR+ +ID
Sbjct: 105 GGSQSRHMIAEYEMFFRDASG--VKIPNIYKFQILITTYEILLADCQELSEIEWRILVID 162
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLKNRNCKLLEGL++L +
Sbjct: 163 EAHRLKNRNCKLLEGLKILDM--------------------------------------- 183
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
TE +V KLQ LL+PMMLRRLKEDVEK++APKEET++EVE+T+IQK+YYR ILE+N
Sbjct: 184 -----TEGQVEKLQQLLRPMMLRRLKEDVEKNLAPKEETIIEVEMTSIQKRYYRAILEKN 238
Query: 474 FSFLSKGT-TSANVPNLMNTMMELRKCCIHPYLLNG 508
FSFL+KG +++N+PNLMNTMMELRKCC HP+L+NG
Sbjct: 239 FSFLTKGAGSTSNLPNLMNTMMELRKCCNHPFLING 274
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 99/158 (62%), Gaps = 33/158 (20%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
K +P S+W KL K+P YK+DN LR YQLEG+NWL +SW NG++CILADE
Sbjct: 2 KPRPVKSEWNKLSKTPKYKDDNVLREYQLEGVNWLTYSWCNGQSCILADE---------- 51
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIV 127
MGLGKTIQ++ F+ V KTGI GPFLV+APLSTI NWQRE E+WTD+N +V
Sbjct: 52 ---------MGLGKTIQTIGFLHEVEKTGIPGPFLVLAPLSTIVNWQREVESWTDMNCVV 102
Query: 128 YHATFVVLLQTGSKFFRICLE---FFVDAVFKTGIRGP 162
YH GS+ + E FF DA +G++ P
Sbjct: 103 YHG--------GSQSRHMIAEYEMFFRDA---SGVKIP 129
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V KTGI GPFLV+APLSTI NWQRE E+WTD+N +VYHG
Sbjct: 63 FLHEVEKTGIPGPFLVLAPLSTIVNWQREVESWTDMNCVVYHG 105
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
W+R ECF+VE+GLLTFGWGRW + LA F+ E+ VE +AR +
Sbjct: 642 WTRLECFRVEKGLLTFGWGRWDDILATTRFKRRLCEKDVESIARTM 687
>gi|67467805|ref|XP_649984.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56466523|gb|EAL44598.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449707532|gb|EMD47179.1| chromodomain helicase-DNA-binding protein, putative [Entamoeba
histolytica KU27]
Length = 1247
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 156/215 (72%), Gaps = 3/215 (1%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ +R +++ YE ++++ + + I KFHVL+TT+EI+ISD +L +W + ++DE
Sbjct: 382 SKGNRQLVKYYEWYYKDFQGKLIPGH--LKFHVLLTTYEIVISDWEDLSKISWLVTVVDE 439
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN++ KLL+ L + H+VLL+GTP+QNN+ EL++LLN++EP+ F + E F EF
Sbjct: 440 AHRLKNKDSKLLKALCNIQTNHKVLLTGTPIQNNLGELWTLLNYIEPKTFPSLEEFDHEF 499
Query: 415 GQL-KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
L K+ +VNKLQ +KP LRR+K +VEKSI PKEET++EVELT +QK+YYR + E+N
Sbjct: 500 NSLDKSAEQVNKLQESIKPFFLRRMKNEVEKSIPPKEETIIEVELTMVQKQYYRALYEKN 559
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FL+KG +NVPNL N MM+LRK C HPYL+ G
Sbjct: 560 REFLNKGCVGSNVPNLQNLMMQLRKVCNHPYLIPG 594
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 75/121 (61%), Gaps = 20/121 (16%)
Query: 12 PASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNC 71
P W K +SP YK+ N LR+YQLEG NWL+F+W G+ CILADEMG
Sbjct: 281 PKRVWQKKVESPNYKHGNKLRSYQLEGHNWLVFNWCRGKGCILADEMG------------ 328
Query: 72 ILADEMGLGKTIQSLTFVDAVFK-TGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
LGKT+Q ++F++ ++ ++GPFL++ PLS I +W RE WTD+NV++YH
Sbjct: 329 -------LGKTVQVVSFLEHLYSFQKLQGPFLIVVPLSMIEHWHREILEWTDMNVVIYHG 381
Query: 131 T 131
+
Sbjct: 382 S 382
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRR 194
++GPFL++ PLS I +W RE WTD+NV++YHG +
Sbjct: 348 LQGPFLIVVPLSMIEHWHREILEWTDMNVVIYHGSK 383
>gi|449018707|dbj|BAM82109.1| chromodomain helicase DNA binding protein CHD [Cyanidioschyzon
merolae strain 10D]
Length = 2014
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 136/187 (72%)
Query: 322 LYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLS 381
L+K+HVLITT+EII+ + L+ W + ++DEAHRLKNR KL + L EHRVLL+
Sbjct: 466 LFKWHVLITTYEIILQEANRLRGIPWAVIVVDEAHRLKNRQSKLFDELLGFRSEHRVLLT 525
Query: 382 GTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKED 441
GTPLQNN ELFSLL+FLEP +F N + F +G ++ V L+ LL+P +LRR+KED
Sbjct: 526 GTPLQNNSLELFSLLHFLEPAKFPNEKEFQQAYGDIRDAEAVENLKALLRPYLLRRMKED 585
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCI 501
VEK+I PKEET++ VELT IQK++YR + E+NF+FL +G NV NL N +MELRKCC
Sbjct: 586 VEKAIPPKEETLISVELTRIQKQWYRALYEQNFAFLEQGGKRNNVGNLRNIVMELRKCCN 645
Query: 502 HPYLLNG 508
HPYL+ G
Sbjct: 646 HPYLIRG 652
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 82/127 (64%), Gaps = 22/127 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
K+P + PAS +V+L +P +KN LR YQLEGLNWL+ WF + ILADEMG
Sbjct: 337 KRPPRPNPAS-FVRL-SNPSFKNGGELREYQLEGLNWLVHCWFKRQGSILADEMG----- 389
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFK-TGIRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ+++F+D +++ +RGPFLV+APLST+ +W+REFE WT +
Sbjct: 390 --------------LGKTIQAVSFLDYLYREQHLRGPFLVVAPLSTLGHWKREFETWTHM 435
Query: 124 NVIVYHA 130
N IV+H
Sbjct: 436 NAIVFHG 442
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Query: 150 FVDAVFK-TGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+D +++ +RGPFLV+APLST+ +W+REFE WT +N IV+HG
Sbjct: 399 FLDYLYREQHLRGPFLVVAPLSTLGHWKREFETWTHMNAIVFHG 442
>gi|407042021|gb|EKE41080.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
nuttalli P19]
Length = 745
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 156/215 (72%), Gaps = 3/215 (1%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ +R +++ YE ++++ + + I KFHVL+TT+EI+ISD +L +W + ++DE
Sbjct: 382 SKGNRQLVKYYEWYYKDFQGKLIPGH--LKFHVLLTTYEIVISDWEDLSKISWLVTVVDE 439
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN++ KLL+ L + H+VLL+GTP+QNN+ EL++LLN++EP+ F + E F EF
Sbjct: 440 AHRLKNKDSKLLKALCNIQTNHKVLLTGTPIQNNLGELWTLLNYIEPKTFPSLEEFDHEF 499
Query: 415 GQL-KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
L K+ +VNKLQ +KP LRR+K +VEKSI PKEET++EVELT +QK+YYR + E+N
Sbjct: 500 NSLDKSAEQVNKLQESIKPFFLRRMKNEVEKSIPPKEETIIEVELTMVQKQYYRALYEKN 559
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FL+KG +NVPNL N MM+LRK C HPYL+ G
Sbjct: 560 REFLNKGCVGSNVPNLQNLMMQLRKVCNHPYLIPG 594
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 76/121 (62%), Gaps = 20/121 (16%)
Query: 12 PASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNC 71
P W K +SP YK+ NTLR+YQLEG NWL+F+W G+ CILADEMG
Sbjct: 281 PKRVWQKKVESPNYKHGNTLRSYQLEGHNWLVFNWCRGKGCILADEMG------------ 328
Query: 72 ILADEMGLGKTIQSLTFVDAVFK-TGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
LGKT+Q ++F++ ++ ++GPFL++ PLS I +W RE WTD+NV++YH
Sbjct: 329 -------LGKTVQVVSFLEHLYSFQKLQGPFLIVVPLSMIEHWHREILEWTDMNVVIYHG 381
Query: 131 T 131
+
Sbjct: 382 S 382
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRR 194
++GPFL++ PLS I +W RE WTD+NV++YHG +
Sbjct: 348 LQGPFLIVVPLSMIEHWHREILEWTDMNVVIYHGSK 383
>gi|301097967|ref|XP_002898077.1| chromodomain protein, putative [Phytophthora infestans T30-4]
gi|262105438|gb|EEY63490.1| chromodomain protein, putative [Phytophthora infestans T30-4]
Length = 1004
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/235 (48%), Positives = 159/235 (67%), Gaps = 24/235 (10%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKE----------------KDLYKFHVLITTFEII-IS 337
++A+R +LQ YE F D+ + E ++ Y+F VLITT+E+ +
Sbjct: 387 SAAAREVLQNYEFFMSEDELLRVDELTRKDNNGKRAAPQPKRNCYRFDVLITTYEMASAT 446
Query: 338 DCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHL----EHRVLLSGTPLQNNVNELF 393
D +L NW+L ++DEAHRLKNRN KL +LH E+ +LL+GTPLQNNV EL+
Sbjct: 447 DLYKLAQINWQLMVVDEAHRLKNRNSKLS---NILHTRFTYENMLLLTGTPLQNNVEELW 503
Query: 394 SLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETV 453
LLNFL+ ++F++ E+F+ FG+L ++V +L LKP +LRR+KEDVEKS+APKEET+
Sbjct: 504 VLLNFLDTKKFASKESFLESFGELTDSAQVERLHSELKPYLLRRMKEDVEKSLAPKEETI 563
Query: 454 VEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+EVELT +QK+YYR I E+N FLS+G + P+LMN +MELRKCC HP+L+ G
Sbjct: 564 IEVELTVLQKQYYRAIYEKNTEFLSRGGRKGDTPSLMNVLMELRKCCNHPFLVKG 618
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%), Gaps = 20/114 (17%)
Query: 20 EKSPVYKNDNT--LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
E P + + T LR YQL G+NW++F+W+ RN +LADEMGLGKT+Q
Sbjct: 292 ESRPPCRKEQTFQLRDYQLTGVNWMLFNWYQKRNSMLADEMGLGKTVQ------------ 339
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHAT 131
T+ + + V +T PF+++APLST+ +WQREF++WT+LN +VYH +
Sbjct: 340 ----TVMYINHLAVVERTP--QPFIIVAPLSTLGHWQREFDSWTNLNAVVYHGS 387
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 29/31 (93%)
Query: 162 PFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
PF+++APLST+ +WQREF++WT+LN +VYHG
Sbjct: 356 PFIIVAPLSTLGHWQREFDSWTNLNAVVYHG 386
>gi|348682915|gb|EGZ22731.1| hypothetical protein PHYSODRAFT_388148 [Phytophthora sojae]
Length = 1020
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/236 (48%), Positives = 158/236 (66%), Gaps = 25/236 (10%)
Query: 295 ASASRNMLQEYELFFRND-----------------KNQFIKEKDLYKFHVLITTFEII-I 336
++A+R++LQ YE F D K +++ Y+F VLITT+E+
Sbjct: 401 SAAARDILQNYEFFLTEDELLRADGLSGKTNSNGKKAPPRPKRNCYRFDVLITTYEMASA 460
Query: 337 SDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLH----LEHRVLLSGTPLQNNVNEL 392
+D +L NW+L ++DEAHRLKNRN KL LLH E+ +LL+GTPLQNNV EL
Sbjct: 461 TDLYKLAQINWQLMVVDEAHRLKNRNSKLS---NLLHTRFTFENMLLLTGTPLQNNVEEL 517
Query: 393 FSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEET 452
+ LLNFL+ ++F++ E F+ FG+L ++V +L LKP +LRR+KEDVEKS+APKEET
Sbjct: 518 WVLLNFLDDKKFNSKEDFLESFGELTDSAQVERLHSELKPYLLRRMKEDVEKSLAPKEET 577
Query: 453 VVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
++EVELT +QK+YYR I E+N FLS+G + P+LMN +MELRKCC HP+L+ G
Sbjct: 578 IIEVELTVLQKQYYRAIYEKNTEFLSRGGKKGDTPSLMNVLMELRKCCNHPFLVKG 633
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 18/101 (17%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR YQL G+NW++F+W+ RN +LADEMGLGKT+Q T+ + +
Sbjct: 319 LRDYQLTGVNWMLFNWYQKRNSMLADEMGLGKTVQ----------------TVMYINHLA 362
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHAT 131
V +T PF+++APLST+ +WQREFE WT+LN +VYH +
Sbjct: 363 VVERTP--NPFIIVAPLSTLGHWQREFECWTNLNAVVYHGS 401
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 162 PFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
PF+++APLST+ +WQREFE WT+LN +VYHG
Sbjct: 370 PFIIVAPLSTLGHWQREFECWTNLNAVVYHG 400
>gi|348688432|gb|EGZ28246.1| hypothetical protein PHYSODRAFT_470076 [Phytophthora sojae]
Length = 2182
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/187 (53%), Positives = 145/187 (77%), Gaps = 1/187 (0%)
Query: 322 LYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLS 381
++KFH+L+TTFE I++D E + +WRL ++DEAHRLK+ ++L+ +R+LH++ +VLL+
Sbjct: 986 IFKFHILLTTFETILADFEEFEHIHWRLVVVDEAHRLKSAGSRVLKMMRVLHVDRKVLLT 1045
Query: 382 GTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKED 441
GTPLQNN EL+ LLN+LEP +F++ E F + FG+L ++ +V KLQ LL P +LRR+KED
Sbjct: 1046 GTPLQNNTQELWVLLNYLEPVKFASLEEFNASFGKLHSQEQVVKLQQLLAPYILRRVKED 1105
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCI 501
VEKSI PKEET++ VELT +QK+YYR I ++N SFL +GT + +P L N ++LRKCC
Sbjct: 1106 VEKSIPPKEETIISVELTTLQKQYYRAIYDKNKSFLYRGTKNG-LPTLNNIQLQLRKCCN 1164
Query: 502 HPYLLNG 508
HP+L+ G
Sbjct: 1165 HPFLIKG 1171
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 18/123 (14%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQS 66
P + A+++V E+SP YK TLR YQ+EGLNW++ R+CILADEMGLGKT+Q
Sbjct: 850 PTDRGDANEFVPYEQSPTYKGGRTLRQYQVEGLNWMVSCIKAQRSCILADEMGLGKTVQI 909
Query: 67 LTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVI 126
++ L + M K+ +S IRGPFL++ PLSTI +W+RE E+WTDLNV
Sbjct: 910 VS----LLEHM---KSEES-----------IRGPFLIVVPLSTIQHWRREIESWTDLNVC 951
Query: 127 VYH 129
VYH
Sbjct: 952 VYH 954
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/33 (72%), Positives = 29/33 (87%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 191
IRGPFL++ PLSTI +W+RE E+WTDLNV VYH
Sbjct: 922 IRGPFLIVVPLSTIQHWRREIESWTDLNVCVYH 954
>gi|219128668|ref|XP_002184529.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403979|gb|EEC43928.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 479
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 106/222 (47%), Positives = 152/222 (68%), Gaps = 11/222 (4%)
Query: 295 ASASRNMLQEYELFFRNDKNQFI--------KEKDLYKFHVLITTFEIIISDCLELKDFN 346
++ +R+ L + E ++ +QF+ K+ ++ KF VLITT+E+ + D +
Sbjct: 89 SADARDFLVQQEFYY---TDQFVPKPTAVKLKKLNVTKFSVLITTYEVALKDVAVISKIR 145
Query: 347 WRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSN 406
WR+ I+DEAHRLKN +L E L ++ EH VLL+GTP+ N EL++LL+F P F +
Sbjct: 146 WRVLIVDEAHRLKNSKARLFEELAMVPREHCVLLTGTPIANATEELWALLHFANPSVFDD 205
Query: 407 NEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYY 466
++F+ +FG++ ++VN+L LLKP +LRR+KEDVEKS+ PKEET++EV LT IQK +Y
Sbjct: 206 KDSFLEKFGEMTDAAQVNELHNLLKPYLLRRVKEDVEKSLPPKEETILEVSLTPIQKTFY 265
Query: 467 RGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+ I ERN SFL KGT +N P+LMN MMELRKCC HPYL+ G
Sbjct: 266 KAIYERNTSFLFKGTKPSNAPSLMNVMMELRKCCNHPYLVKG 307
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 68/102 (66%), Gaps = 17/102 (16%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR+YQLEG+NWL+F+W+N R+CILADEMGLGKTIQS + +QSL
Sbjct: 4 LRSYQLEGVNWLLFNWWNKRSCILADEMGLGKTIQS----------AAFLRGLQSLP--- 50
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
T ++GPFL++APLS + WQ E +W D+NV++YH +
Sbjct: 51 ---ATQVQGPFLIVAPLSLVNQWQSELRSWAPDMNVVLYHGS 89
>gi|301117486|ref|XP_002906471.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora
infestans T30-4]
gi|262107820|gb|EEY65872.1| chromodomain-helicase-DNA-binding protein, putative [Phytophthora
infestans T30-4]
Length = 2158
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/187 (53%), Positives = 144/187 (77%), Gaps = 1/187 (0%)
Query: 322 LYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLS 381
++KFH+L+TTFE I++D E + +WRL ++DEAHRLK+ ++L+ +R+LH++ +VLL+
Sbjct: 991 IFKFHILLTTFETILADFEEFEHIHWRLVVVDEAHRLKSAGSRVLKMMRVLHVDRKVLLT 1050
Query: 382 GTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKED 441
GTPLQNN EL+ LLN+LEP +F++ E F FG+L ++ +V +LQ LL P +LRR+KED
Sbjct: 1051 GTPLQNNTQELWVLLNYLEPVKFASLEEFNQNFGKLHSQEQVVRLQQLLAPFILRRVKED 1110
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCI 501
VEKSI PKEET+V VELT +QK+YYR I ++N SFL +GT + +P L N ++LRKCC
Sbjct: 1111 VEKSIPPKEETIVSVELTTLQKQYYRAIYDKNKSFLYRGTKNG-LPTLNNIQLQLRKCCN 1169
Query: 502 HPYLLNG 508
HP+L+ G
Sbjct: 1170 HPFLIKG 1176
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 79/117 (67%), Gaps = 18/117 (15%)
Query: 13 ASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCI 72
A+++V E+SP YK TLRAYQ+EGLNW++ R+CILADEMGLGKT+Q ++
Sbjct: 861 ANEFVPYEQSPTYKGGRTLRAYQVEGLNWMVSCIKAQRSCILADEMGLGKTVQIVS---- 916
Query: 73 LADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
L + M K+ +S IRGP+L++ PLSTI +W+RE E+WTDLNV VYH
Sbjct: 917 LIEHM---KSEES-----------IRGPYLIVVPLSTIQHWRREIESWTDLNVCVYH 959
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 3/46 (6%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH---GRRKKLSRRD 201
IRGP+L++ PLSTI +W+RE E+WTDLNV VYH R K + +D
Sbjct: 927 IRGPYLIVVPLSTIQHWRREIESWTDLNVCVYHDIGDRSTKFTAKD 972
>gi|269860637|ref|XP_002650038.1| SWF/SNF family helicase [Enterocytozoon bieneusi H348]
gi|220066525|gb|EED44003.1| SWF/SNF family helicase [Enterocytozoon bieneusi H348]
Length = 1176
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 152/210 (72%), Gaps = 8/210 (3%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R++L EYE F N ++ F V++TT+E++++ L F + + IIDEAHRL
Sbjct: 346 RDILVEYE--FTNKTGNI----NVRLFDVILTTYEMVMAGQEHLSQFEYSVSIIDEAHRL 399
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK 418
KN N K + LRLL + H+VLL+GTP+QNN+ EL++L NF++ Q+F++ + F+ E+ +L
Sbjct: 400 KNPNSKAAKSLRLLKINHKVLLTGTPIQNNLAELWALFNFIDSQRFNSLDNFLKEY-KLN 458
Query: 419 TESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS 478
+V+KLQ LLKP+MLRR+KEDVE SI KEET++EVELT QK+YYR ILE+NF FL
Sbjct: 459 NSKDVDKLQALLKPLMLRRMKEDVETSIPAKEETIIEVELTIAQKRYYRAILEKNFEFL- 517
Query: 479 KGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+ + NVPNL+N MMELRKCCIHPYLL G
Sbjct: 518 QSNSKKNVPNLINAMMELRKCCIHPYLLKG 547
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 78/124 (62%), Gaps = 20/124 (16%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P S +K +S VYKN+NTLR YQLEG+NWLM W+ ++CI+ADEMG
Sbjct: 239 RPDKSQQIKYTESYVYKNNNTLRPYQLEGINWLMNRWYWRQSCIMADEMG---------- 288
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
LGKT+QS+ F++A+ + P +VIAPLSTI +W+REF AWT+L V+ Y
Sbjct: 289 ---------LGKTVQSVCFIEALSREFNYNHPVIVIAPLSTIVHWEREFAAWTNLRVLTY 339
Query: 129 HATF 132
H +
Sbjct: 340 HGSI 343
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 162 PFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
P +VIAPLSTI +W+REF AWT+L V+ YHG
Sbjct: 311 PVIVIAPLSTIVHWEREFAAWTNLRVLTYHG 341
>gi|384485015|gb|EIE77195.1| hypothetical protein RO3G_01899 [Rhizopus delemar RA 99-880]
Length = 1659
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 148/217 (68%), Gaps = 20/217 (9%)
Query: 293 KSASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
+ ++ SRN+L E E +++ +++ I + YKF VLITT+E+ + L LKD W+ +
Sbjct: 426 RGSTLSRNLLVETEFHYKDQQSKPIPNR--YKFDVLITTYEMASAGALHLKDIPWKCAVF 483
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLKN+ K HL + +EL+SLLNF++P+ F+N AF +
Sbjct: 484 DEAHRLKNKQSKA-------HL----------FKTTGDELYSLLNFMQPEIFNNERAFFA 526
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
E+G+L+T +EV +LQ LLKP+MLRR KEDVEK+I KEETV+EVELTN QKK+YR ILE+
Sbjct: 527 EYGKLQTAAEVERLQALLKPIMLRRFKEDVEKTIPVKEETVIEVELTNPQKKWYRAILEK 586
Query: 473 NFSFLSKGTTS-ANVPNLMNTMMELRKCCIHPYLLNG 508
NFSFL KG S +P L N MM+LRKCCIHPYLL G
Sbjct: 587 NFSFLKKGAKSNKEMPQLRNIMMQLRKCCIHPYLLEG 623
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 81/128 (63%), Gaps = 18/128 (14%)
Query: 4 IKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKT 63
+ P ++P + +VK + S YK DN LR YQLEGLNWL F ++N R+CILADEMGLGKT
Sbjct: 319 VSNPPRRPDYTQFVKYDTSLKYKFDNELRLYQLEGLNWLRFCYYNDRSCILADEMGLGKT 378
Query: 64 IQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDL 123
+QS+ D ++ ++GPFL++APLSTIP+W+R +AWTDL
Sbjct: 379 VQSVA------------------FLNDLYYQLNVKGPFLIVAPLSTIPHWERAIKAWTDL 420
Query: 124 NVIVYHAT 131
NV+ Y +
Sbjct: 421 NVVDYRGS 428
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 146 CLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
+ F D ++ ++GPFL++APLSTIP+W+R +AWTDLNV+ Y G
Sbjct: 381 SVAFLNDLYYQLNVKGPFLIVAPLSTIPHWERAIKAWTDLNVVDYRG 427
>gi|440294401|gb|ELP87418.1| chromodomain helicase hrp1, putative [Entamoeba invadens IP1]
Length = 1234
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/215 (47%), Positives = 157/215 (73%), Gaps = 3/215 (1%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ +R ++++YE F+ +++ K + KF+V++TT+E +I+D +L+ +W + +IDE
Sbjct: 372 SKENRKLVKKYEWFYTDEEGN--KNTNQTKFNVMVTTYETLIADFEDLQQISWFVVVIDE 429
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
A RLKN++ KLL+ L L +H++LL+GTP+QNN+ EL++LLN++EP++F + E F +
Sbjct: 430 AQRLKNKDSKLLKTLSSLKTDHKILLTGTPIQNNLGELWTLLNYIEPKKFGSLEEFDKMY 489
Query: 415 GQLKTESE-VNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
G + E V +LQ +KP +LRR+K DVEKSI PKEETV+EVELT +QK+YYR + E+N
Sbjct: 490 GNIDNNPEQVTELQKSIKPFLLRRVKSDVEKSIPPKEETVIEVELTMVQKQYYRALYEKN 549
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FL+KG +N+PNL N MM+LRK C HPYL++G
Sbjct: 550 REFLNKGCVGSNMPNLQNLMMQLRKVCNHPYLISG 584
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 73/117 (62%), Gaps = 20/117 (17%)
Query: 16 WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
W K +SPVYKN+NTLR+YQLEG NW++++W GR CILADEMG
Sbjct: 275 WNKKIESPVYKNNNTLRSYQLEGHNWMVYNWCKGRGCILADEMG---------------- 318
Query: 76 EMGLGKTIQSLTFVDAVFK-TGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHAT 131
LGKT+Q +TF++ + + GPFL++ PL + +W RE WTDLNVI+Y +
Sbjct: 319 ---LGKTVQVVTFLEHLHSYQKLHGPFLIVMPLGMVEHWHREISEWTDLNVILYSGS 372
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRK 195
+ GPFL++ PL + +W RE WTDLNVI+Y G ++
Sbjct: 338 LHGPFLIVMPLGMVEHWHREISEWTDLNVILYSGSKE 374
>gi|348681788|gb|EGZ21604.1| hypothetical protein PHYSODRAFT_329533 [Phytophthora sojae]
Length = 2117
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 146/210 (69%), Gaps = 4/210 (1%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R ++E E F ++ + + + +YKF+VL+T+++ ++ D L+ +WR +IDEAH+L
Sbjct: 1110 RAFIREQEFHFASEAH---RRRGIYKFNVLVTSYQTLMMDAEYLETIHWRYLVIDEAHKL 1166
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK 418
KNR KLL+ L + +L++GTPLQN V EL+ LLNF+EP +F + + F EFG L
Sbjct: 1167 KNREAKLLQVLHGFTWDSCLLMTGTPLQNGVFELWCLLNFIEPDKFPSQQQFYDEFGDLN 1226
Query: 419 TESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS 478
T +V +L L+P MLRR+KEDVEKSI PKEET+V+VELT +QKKYYR I ERN SFL+
Sbjct: 1227 TAEQVAQLHEQLRPYMLRRVKEDVEKSIPPKEETIVDVELTTMQKKYYRAIFERNRSFLN 1286
Query: 479 KGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
G S V NL+N MELRKCC HP+L+ G
Sbjct: 1287 MG-ASGTVANLVNVEMELRKCCNHPFLIRG 1315
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 82/120 (68%), Gaps = 18/120 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P S W K ++SPVY N NTLR+YQLEGLNW+ F W+N RNCILADEMGLGKT+Q+ +
Sbjct: 1000 RPEPSTWAKYQESPVYNNQNTLRSYQLEGLNWMTFCWYNRRNCILADEMGLGKTVQATS- 1058
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
IL + ++ F IRGPFLV+APL+T+ NW+RE E WT +N +VYH
Sbjct: 1059 --IL-------EHLRQREF--------IRGPFLVVAPLATLGNWKREIETWTSMNCVVYH 1101
>gi|429962795|gb|ELA42339.1| hypothetical protein VICG_00739, partial [Vittaforma corneae ATCC
50505]
Length = 1170
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 136/184 (73%), Gaps = 2/184 (1%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V+ITT+E+ ++ L F + + + DEAHRLKN + K LR + H+VLLSGTP
Sbjct: 375 FDVIITTYEMAMAGADHLMQFEYGVAVFDEAHRLKNTSSKAASCLRSFSIFHKVLLSGTP 434
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEK 444
+QNN+NEL+SL NF++P +F N F+ EF K+E +V KLQ +LKP+MLRR+KEDVE
Sbjct: 435 IQNNLNELWSLFNFIDPIRFDNLNNFLQEFKMEKSE-DVQKLQNVLKPLMLRRMKEDVET 493
Query: 445 SIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPY 504
+I KEET++EVELT IQK+YYR ILE+N FL+KG S N PNL+N MMELRKCCIHPY
Sbjct: 494 TIPMKEETIIEVELTTIQKRYYRAILEKNIEFLTKGDRS-NAPNLINAMMELRKCCIHPY 552
Query: 505 LLNG 508
L+ G
Sbjct: 553 LIKG 556
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 81/125 (64%), Gaps = 20/125 (16%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P + +K +KS VYKN NTLR+YQ+EG+NWL+ W+ ++CI+ADEMG
Sbjct: 248 RPSKENQLKFDKSKVYKNGNTLRSYQIEGVNWLLNRWYFKQSCIMADEMG---------- 297
Query: 70 NCILADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
LGKT+QS+ FV+++F + P LV+APLSTI +W+REF+ WTDL V+ Y
Sbjct: 298 ---------LGKTVQSVIFVNSLFCEFDYCAPALVVAPLSTIVHWEREFKNWTDLRVLTY 348
Query: 129 HATFV 133
H + +
Sbjct: 349 HGSIM 353
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 26/32 (81%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
P LV+APLSTI +W+REF+ WTDL V+ YHG
Sbjct: 319 APALVVAPLSTIVHWEREFKNWTDLRVLTYHG 350
>gi|449329733|gb|AGE96002.1| chromodomain helicase DNA-binding protein 2 [Encephalitozoon
cuniculi]
Length = 1251
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 150/210 (71%), Gaps = 8/210 (3%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R ++ EYE + KN ++ F VLITT++ ++++ L F++ + I DEAHRL
Sbjct: 388 RALIAEYEFVLK--KNNL----EIRLFDVLITTYDTVMAEQEHLSQFHFSVGIFDEAHRL 441
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK 418
KN K LR L H+VLLSGTPLQNN++EL+SLLNF++P +FS+ F+ EF +++
Sbjct: 442 KNAKSKAATILRTLKFNHKVLLSGTPLQNNISELWSLLNFIDPMRFSSLPHFLGEF-KME 500
Query: 419 TESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS 478
++V KLQ LL+P+MLRR+KEDVEKSI KEET++EV LT IQK++YR ILE+N FL+
Sbjct: 501 NINDVEKLQGLLRPLMLRRMKEDVEKSIPTKEETIIEVALTMIQKRFYRAILEKNIEFLT 560
Query: 479 KGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KG + PNL+N MMELRKCCIHPYL+ G
Sbjct: 561 KGGKES-APNLLNVMMELRKCCIHPYLIKG 589
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 79/121 (65%), Gaps = 20/121 (16%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP +++K E+SPV+K N LR YQLEGLNWL+ W+ ++CI+ADEMGL
Sbjct: 281 RPPRENFIKYEESPVFKGGNRLREYQLEGLNWLLNRWYYKQSCIMADEMGL--------- 331
Query: 70 NCILADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
GKT+QS+TF++ +F K P LV+ PLS IP+W+REFEAWTDL V+ Y
Sbjct: 332 ----------GKTVQSVTFINTLFTKYDYCAPVLVVTPLSIIPHWEREFEAWTDLRVLKY 381
Query: 129 H 129
H
Sbjct: 382 H 382
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 150 FVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRR 194
F++ +F K P LV+ PLS IP+W+REFEAWTDL V+ YH R
Sbjct: 340 FINTLFTKYDYCAPVLVVTPLSIIPHWEREFEAWTDLRVLKYHENR 385
>gi|85690939|ref|XP_965869.1| helicase DNA-binding protein [Encephalitozoon cuniculi GB-M1]
gi|19068436|emb|CAD24904.1| similarity to CHROMODOMAIN HELICASE DNA-BINDING PROTEIN 2
[Encephalitozoon cuniculi GB-M1]
Length = 1251
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 150/210 (71%), Gaps = 8/210 (3%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R ++ EYE + KN ++ F VLITT++ ++++ L F++ + I DEAHRL
Sbjct: 388 RALIAEYEFVLK--KNNL----EIRLFDVLITTYDTVMAEQEHLSQFHFSVGIFDEAHRL 441
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK 418
KN K LR L H+VLLSGTPLQNN++EL+SLLNF++P +FS+ F+ EF +++
Sbjct: 442 KNAKSKAATILRTLKFNHKVLLSGTPLQNNISELWSLLNFIDPMRFSSLPHFLGEF-KME 500
Query: 419 TESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS 478
++V KLQ LL+P+MLRR+KEDVEKSI KEET++EV LT IQK++YR ILE+N FL+
Sbjct: 501 NINDVEKLQGLLRPLMLRRMKEDVEKSIPTKEETIIEVALTMIQKRFYRAILEKNIEFLT 560
Query: 479 KGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KG + PNL+N MMELRKCCIHPYL+ G
Sbjct: 561 KGGKES-APNLLNVMMELRKCCIHPYLIKG 589
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 79/121 (65%), Gaps = 20/121 (16%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP +++K E+SPV+K N LR YQLEGLNWL+ W+ ++CI+ADEMGL
Sbjct: 281 RPPRENFIKYEESPVFKGGNRLREYQLEGLNWLLNRWYYKQSCIMADEMGL--------- 331
Query: 70 NCILADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
GKT+QS+TF++ +F K P LV+ PLS IP+W+REFEAWTDL V+ Y
Sbjct: 332 ----------GKTVQSVTFINTLFTKYDYCAPVLVVTPLSIIPHWEREFEAWTDLRVLKY 381
Query: 129 H 129
H
Sbjct: 382 H 382
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 150 FVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRR 194
F++ +F K P LV+ PLS IP+W+REFEAWTDL V+ YH R
Sbjct: 340 FINTLFTKYDYCAPVLVVTPLSIIPHWEREFEAWTDLRVLKYHENR 385
>gi|397643281|gb|EJK75763.1| hypothetical protein THAOC_02504, partial [Thalassiosira oceanica]
Length = 1585
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 146/218 (66%), Gaps = 12/218 (5%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R++L+EYE ++ + + D KF+VL+TT++ +ISD + D WR+ ++DEAHRL
Sbjct: 1344 RDVLREYEWYYEDRPHT----PDYLKFNVLVTTYDTLISDFDVIGDVPWRVTVVDEAHRL 1399
Query: 359 KNRNCKLLE--------GLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAF 410
+N KLLE G + RVL++GTPLQNN EL++LLNF+EP F + + F
Sbjct: 1400 RNVKGKLLECMKETSAKGTMKYGYQSRVLMTGTPLQNNTQELWTLLNFIEPSLFRSLQDF 1459
Query: 411 MSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGIL 470
+ FG + +V+ LQ + P MLRR+KEDV K I KEETV++VELT+IQK+YYR I
Sbjct: 1460 ETNFGNMANREQVDALQRKISPFMLRRVKEDVAKDIPAKEETVIDVELTSIQKQYYRAIF 1519
Query: 471 ERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
E+N +FLS G + A P++MN MELRKCC HP+LL+G
Sbjct: 1520 EQNHAFLSMGASKAGAPSMMNIQMELRKCCNHPFLLDG 1557
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 67/110 (60%), Gaps = 18/110 (16%)
Query: 20 EKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGL 79
+K +YKN N LR YQ++G+NWL +++ + ILADEMGLGKT+Q
Sbjct: 1246 KKPHLYKNGNKLRDYQVDGVNWLSSCFYHQQGAILADEMGLGKTVQ-------------- 1291
Query: 80 GKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
+ L + V K I GPFLV+ PLSTI +W+REF+AWTD+ VYH
Sbjct: 1292 --IVSYLEHLHRVEK--ISGPFLVVVPLSTIEHWRREFDAWTDMQCCVYH 1337
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKK 196
I GPFLV+ PLSTI +W+REF+AWTD+ VYH R ++
Sbjct: 1305 ISGPFLVVVPLSTIEHWRREFDAWTDMQCCVYHDRMRQ 1342
>gi|325181909|emb|CCA16363.1| ChromodomainhelicaseDNAbinding protein 8 putative [Albugo laibachii
Nc14]
Length = 2334
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 153/210 (72%), Gaps = 3/210 (1%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R+ ++E E +++ ++ + + +YKF+VL+T+++ +++D L+ +WR +IDEAH+L
Sbjct: 1307 RSFIREQEFYYK--QSDMYRRRGIYKFNVLVTSYQTLMADAEFLECIHWRYLVIDEAHKL 1364
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK 418
KNR KLL+ L + +L++GTPLQN V EL+ LLNF+EP++F + + F +++G L
Sbjct: 1365 KNRETKLLQSLMHFTWDACLLMTGTPLQNGVFELWCLLNFIEPEKFPSQQQFYNDYGDLA 1424
Query: 419 TESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS 478
T +V +L L+P MLRR+KEDVEKSI PKEET+++VELT +QKKYYR I ERN +FL+
Sbjct: 1425 TADQVARLHEQLRPYMLRRVKEDVEKSIPPKEETIIDVELTTLQKKYYRAIFERNRAFLN 1484
Query: 479 KGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+G + +V NL+N MELRKCC HP+L+ G
Sbjct: 1485 QG-AAGSVANLVNVEMELRKCCNHPFLIRG 1513
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 80/120 (66%), Gaps = 18/120 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P + W K ++SPVY N N LR+YQLEGLNWL+F W+N RNCILADEMGLGKT+Q+ +
Sbjct: 1197 RPDPTTWAKYQESPVYNNQNKLRSYQLEGLNWLVFCWYNRRNCILADEMGLGKTVQATS- 1255
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
++ L + IRGPFLVIAPL+T+ NW+RE E WT +N +VYH
Sbjct: 1256 ------------IMEHLR-----QQEHIRGPFLVIAPLATLGNWKREIETWTTMNCVVYH 1298
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/33 (69%), Positives = 28/33 (84%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 191
IRGPFLVIAPL+T+ NW+RE E WT +N +VYH
Sbjct: 1266 IRGPFLVIAPLATLGNWKREIETWTTMNCVVYH 1298
>gi|396080737|gb|AFN82358.1| helicase DNA-binding protein [Encephalitozoon romaleae SJ-2008]
Length = 1245
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 150/210 (71%), Gaps = 8/210 (3%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R ++ EYE + KN ++ F VLITT++ ++++ L F++ + I DEAHRL
Sbjct: 384 RALIAEYEFVLK--KNNL----EIRLFDVLITTYDTVMAEQEHLSQFHFSVGIFDEAHRL 437
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK 418
KN K LR L H+VLLSGTPLQNN++EL+SLLNF++P +FS+ F+ EF +++
Sbjct: 438 KNAKSKAATVLRTLKFNHKVLLSGTPLQNNISELWSLLNFIDPARFSSLPHFLGEF-KME 496
Query: 419 TESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS 478
++V KLQ LL+P+MLRR+KEDVEKSI KEET++EV LT IQK++YR ILE+N FL+
Sbjct: 497 NINDVEKLQGLLRPLMLRRMKEDVEKSIPTKEETIIEVALTMIQKRFYRAILEKNIEFLT 556
Query: 479 KGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KG + PNL+N MMELRKCCIHPYL+ G
Sbjct: 557 KGGKES-APNLLNVMMELRKCCIHPYLIKG 585
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 78/121 (64%), Gaps = 20/121 (16%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P +++K E+SPV+K N LR YQLEGLNWL+ W+ ++CI+ADEMGL
Sbjct: 277 RPSRENFIKYEESPVFKGGNRLREYQLEGLNWLLNRWYYRQSCIMADEMGL--------- 327
Query: 70 NCILADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
GKT+QS+TF++ +F K P LV+ PLS IP+W+REFEAWTDL V+ Y
Sbjct: 328 ----------GKTVQSVTFINTLFTKYDYCAPVLVVTPLSIIPHWEREFEAWTDLRVLKY 377
Query: 129 H 129
H
Sbjct: 378 H 378
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 150 FVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRR 194
F++ +F K P LV+ PLS IP+W+REFEAWTDL V+ YH R
Sbjct: 336 FINTLFTKYDYCAPVLVVTPLSIIPHWEREFEAWTDLRVLKYHENR 381
>gi|325188110|emb|CCA22651.1| chromodomainhelicaseDNAbinding protein putative [Albugo laibachii
Nc14]
Length = 1883
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 154/210 (73%), Gaps = 6/210 (2%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R M++ +E ++ + N I ++FH L+TTFE I++D E + +WRL I+DEAHRL
Sbjct: 981 RAMIRMHEWYYPDRGNSSI-----FRFHALLTTFETILADFEEFESIHWRLLIVDEAHRL 1035
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK 418
K+ ++L+ +R+LH + ++LL+GTPLQNN+ EL+ L+NFLEP +F++ E F ++FG+L+
Sbjct: 1036 KSAGSRVLKQMRVLHCDRKLLLTGTPLQNNMQELWVLINFLEPVKFASWEDFEAKFGRLQ 1095
Query: 419 TESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS 478
+ +V LQ LL P +LRR+KEDVEKSI PKEET++ VELT +QK+YYR I ++N SFL
Sbjct: 1096 SHEQVVTLQKLLAPYVLRRVKEDVEKSIPPKEETIIAVELTTLQKQYYRAIYDKNQSFLY 1155
Query: 479 KGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+G + +P L+N ++LR+CC HP+L+ G
Sbjct: 1156 RGIQNG-LPRLVNIQLQLRQCCNHPFLIKG 1184
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 77/130 (59%), Gaps = 21/130 (16%)
Query: 3 LIKKPKK---KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMG 59
L KPK K D++ E SP YK TLR+YQ+EGLNW++ W R+CILADEMG
Sbjct: 854 LPSKPKSTTVKADKGDFIPYEHSPTYKGGRTLRSYQVEGLNWIISCWKAQRSCILADEMG 913
Query: 60 LGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEA 119
LGKTIQ + ++ V + IRGPFL++ PLSTI +W+RE +
Sbjct: 914 LGKTIQ-------------VAAVLEHF-----VTEESIRGPFLIVVPLSTIQHWRRELQG 955
Query: 120 WTDLNVIVYH 129
WTDLNV VYH
Sbjct: 956 WTDLNVCVYH 965
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 3/45 (6%)
Query: 147 LEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 191
LE FV + IRGPFL++ PLSTI +W+RE + WTDLNV VYH
Sbjct: 924 LEHFVT---EESIRGPFLIVVPLSTIQHWRRELQGWTDLNVCVYH 965
>gi|303388021|ref|XP_003072245.1| helicase DNA-binding protein [Encephalitozoon intestinalis ATCC
50506]
gi|303301384|gb|ADM10885.1| helicase DNA-binding protein [Encephalitozoon intestinalis ATCC
50506]
Length = 1225
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 150/210 (71%), Gaps = 8/210 (3%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R ++ EYE + KN ++ F VLITT++ ++++ L F++ + + DEAHRL
Sbjct: 363 RALIAEYEFVLK--KNNL----EIRLFDVLITTYDTVMAEQESLSQFHFSVGVFDEAHRL 416
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK 418
KN K LR L H+VLLSGTPLQNN++EL+SLLNF++P +FS+ F+ EF +++
Sbjct: 417 KNAKSKAATVLRTLKFNHKVLLSGTPLQNNISELWSLLNFIDPTRFSSLPHFLGEF-KME 475
Query: 419 TESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS 478
++V KLQ LL+P+MLRR+KEDVEKSI KEET++EV LT IQK++YR ILE+N FL+
Sbjct: 476 NINDVEKLQGLLRPLMLRRMKEDVEKSIPTKEETIIEVALTMIQKRFYRAILEKNIEFLT 535
Query: 479 KGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KG + PNL+N MMELRKCCIHPYL+ G
Sbjct: 536 KGGKES-APNLLNVMMELRKCCIHPYLIKG 564
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 79/121 (65%), Gaps = 20/121 (16%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP +++K E+SPV+K N LR YQLEGLNWL+ W+ ++CI+ADEMGL
Sbjct: 256 RPPRENFIKYEESPVFKGGNKLREYQLEGLNWLLNRWYYRQSCIMADEMGL--------- 306
Query: 70 NCILADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
GKT+Q++TFV+ +F K P LV+ PLS IP+W+REFEAWTDL V+ Y
Sbjct: 307 ----------GKTVQTVTFVNTLFTKYDYCAPVLVVTPLSIIPHWEREFEAWTDLRVLKY 356
Query: 129 H 129
H
Sbjct: 357 H 357
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 150 FVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRR 194
FV+ +F K P LV+ PLS IP+W+REFEAWTDL V+ YH R
Sbjct: 315 FVNTLFTKYDYCAPVLVVTPLSIIPHWEREFEAWTDLRVLKYHENR 360
>gi|154421756|ref|XP_001583891.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
gi|121918135|gb|EAY22905.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
Length = 1924
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 145/210 (69%), Gaps = 8/210 (3%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R+ + EYELFF E + KFH+L+TT+E IISD W++ IDEAHRL
Sbjct: 603 RDQMAEYELFF--------SETPIPKFHILLTTYEYIISDRNIFNSIEWQVICIDEAHRL 654
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK 418
KN N KL++ L+ H ++++LL+GTPLQNN+ EL+SLLN+L+ ++F++ EAF ++FG+L+
Sbjct: 655 KNTNSKLMQALKDYHTQYKLLLTGTPLQNNITELWSLLNYLDEEKFNDIEAFQAQFGKLE 714
Query: 419 TESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS 478
++ +LQ +LKP+MLRR+K DVEK I P EE ++E +T QK YY+ I ++N +L+
Sbjct: 715 EHEQITELQGILKPLMLRRMKSDVEKGIKPLEEVIIECAMTQHQKLYYQSIYQKNTEYLT 774
Query: 479 KGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+G N NL N MELRK C HPYLLNG
Sbjct: 775 RGAHKNNSTNLNNIFMELRKVCNHPYLLNG 804
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 69/119 (57%), Gaps = 18/119 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
KP ++ +E P K+ T+R YQ+EG+ +L+ SWFN +N ILADEMGLGKT+QS
Sbjct: 496 KPSPEEYKPIEDFPQSKSGYTIRPYQIEGVCFLVKSWFNNQNAILADEMGLGKTLQS--- 552
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
I L ++ V K + GPFL+I PLSTI W+RE + WT + V Y
Sbjct: 553 -------------ISFLYYLHRVQK--VWGPFLIICPLSTIEQWEREIKEWTTMKVACY 596
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDK 202
GPFL+I PLSTI W+RE + WT + V Y G + RRD+
Sbjct: 567 GPFLIICPLSTIEQWEREIKEWTTMKVACYSGIK---PRRDQ 605
>gi|401825061|ref|XP_003886626.1| DEAD-like helicase [Encephalitozoon hellem ATCC 50504]
gi|395459771|gb|AFM97645.1| DEAD-like helicase [Encephalitozoon hellem ATCC 50504]
Length = 1247
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 150/210 (71%), Gaps = 8/210 (3%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R ++ EYE + KN ++ F VLITT++ ++++ L F++ + I DEAHRL
Sbjct: 386 RALIAEYEFVLK--KNNL----EIRLFDVLITTYDTVMAEQEHLSQFHFSVGIFDEAHRL 439
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK 418
KN K LR L H+VLLSGTPLQNN++EL+SLLNF++P +FS+ F+ EF +++
Sbjct: 440 KNAKSKAATVLRTLKFNHKVLLSGTPLQNNISELWSLLNFIDPVRFSSLPHFLGEF-KME 498
Query: 419 TESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS 478
++V KLQ LL+P+MLRR+KEDVEKSI KEET++EV LT IQK++YR ILE+N FL+
Sbjct: 499 NINDVEKLQGLLRPLMLRRMKEDVEKSIPTKEETIIEVALTMIQKRFYRAILEKNIEFLT 558
Query: 479 KGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
KG + PNL+N MMELRKCCIHPYL+ G
Sbjct: 559 KGGKDS-APNLLNVMMELRKCCIHPYLIKG 587
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 79/121 (65%), Gaps = 20/121 (16%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P +++K ++SPV+K +N LR YQLEGLNWL+ W+ ++CI+ADEMGL
Sbjct: 279 RPSRENFIKYDESPVFKGENRLREYQLEGLNWLLNRWYYRQSCIMADEMGL--------- 329
Query: 70 NCILADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
GKT+QS+TF++ +F K P LV+ PLS IP+W+REFEAWTDL V+ Y
Sbjct: 330 ----------GKTVQSVTFINTLFTKYDYCAPVLVVTPLSIIPHWEREFEAWTDLRVLKY 379
Query: 129 H 129
H
Sbjct: 380 H 380
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 150 FVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRR 194
F++ +F K P LV+ PLS IP+W+REFEAWTDL V+ YH R
Sbjct: 338 FINTLFTKYDYCAPVLVVTPLSIIPHWEREFEAWTDLRVLKYHENR 383
>gi|224008282|ref|XP_002293100.1| chromodomain-helicase [Thalassiosira pseudonana CCMP1335]
gi|220971226|gb|EED89561.1| chromodomain-helicase [Thalassiosira pseudonana CCMP1335]
Length = 698
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/239 (43%), Positives = 157/239 (65%), Gaps = 7/239 (2%)
Query: 275 GGDGKSFSPTMSSGTDGLKSASASRNMLQEYELFFRNDKN-----QFIKEKDLYKFHVLI 329
+ K ++P M+ ++ +R+ L ++E ++ + + Q +K K + KF VLI
Sbjct: 330 ASESKEWAPDMNVVV--YHGSADARDFLVKHEFYYTDQFSSKTVAQQLKRKHITKFQVLI 387
Query: 330 TTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNV 389
TT+E+++ D L W+ I+DEAHRLKN +L E L + + +LL+GTPLQN+
Sbjct: 388 TTYEVVLKDVNVLSKIKWKALIVDEAHRLKNIKARLFEDLASVPRDFCLLLTGTPLQNST 447
Query: 390 NELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPK 449
EL++LL+F +P+ F + + F +FGQL+ +V L +L+P +LRR+KEDVEK++ PK
Sbjct: 448 EELWALLHFCDPKTFGSRDEFTEQFGQLENADQVANLHTVLRPYLLRRVKEDVEKALPPK 507
Query: 450 EETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
EET++EV LT IQK +Y+ I ERN SFL KG+ +N P+LMN MMELRKCC HP+L+ G
Sbjct: 508 EETILEVTLTPIQKTFYKAIYERNTSFLYKGSKPSNAPSLMNIMMELRKCCNHPFLIRG 566
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 85/150 (56%), Gaps = 25/150 (16%)
Query: 11 PPASDWVKLEKSPVYKNDNTL--RAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
P + KL +SPV+ + L RAYQLEG+NWL+++W+N R+CILADEMGLGKTIQS+
Sbjct: 241 PHPRSFRKLTESPVFDTGSVLKLRAYQLEGVNWLLWNWYNRRSCILADEMGLGKTIQSI- 299
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
G +Q V K RGPFLV+APLS + W E + W D+NV+V
Sbjct: 300 ---------GFLHELQR------VPKAKNRGPFLVVAPLSLVAQWASESKEWAPDMNVVV 344
Query: 128 YHATFVVLLQTGSKFFRICLEFFVDAVFKT 157
YH + ++ F + EF+ F +
Sbjct: 345 YHGS------ADARDFLVKHEFYYTDQFSS 368
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
V K RGPFLV+APLS + W E + W D+NV+VYHG
Sbjct: 308 VPKAKNRGPFLVVAPLSLVAQWASESKEWAPDMNVVVYHG 347
>gi|301107063|ref|XP_002902614.1| chromodomain protein, putative [Phytophthora infestans T30-4]
gi|262098488|gb|EEY56540.1| chromodomain protein, putative [Phytophthora infestans T30-4]
Length = 1748
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 148/216 (68%), Gaps = 4/216 (1%)
Query: 293 KSASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
+ S R ++E E F ++ + +++ +YKF+VL+T+++ ++ D L+ +WR +I
Sbjct: 814 EGGSDIRAFIREQEFHFASEAH---RKRGIYKFNVLVTSYQTLMMDAEFLESIHWRYIVI 870
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAH+LKNR KLL+ L + +L++GTPLQN V EL+ LLNF+EP +F + + F
Sbjct: 871 DEAHKLKNREAKLLQVLHGFTWDSCLLMTGTPLQNGVFELWCLLNFIEPDKFPSQQEFYD 930
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EFG L T +V +L L+P MLRR+KEDVEKSI PKEET+V+VELT +QKKYYR I ER
Sbjct: 931 EFGDLNTAEQVAQLHEQLRPYMLRRVKEDVEKSIPPKEETIVDVELTTMQKKYYRAIFER 990
Query: 473 NFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
N FL+ G T V NL+N MELRKCC HP+L+ G
Sbjct: 991 NRQFLNMGAT-GTVANLVNVEMELRKCCNHPFLIRG 1025
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 82/122 (67%), Gaps = 18/122 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P + W K +SPVY N NTLR+YQLEGLNW+ F W+N RNCILADEMGLGKT+Q+ +
Sbjct: 710 RPEPNTWAKYLESPVYNNQNTLRSYQLEGLNWMTFCWYNRRNCILADEMGLGKTVQATS- 768
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
IL + ++ F IRGPFLV+APL+T+ NW+RE E WT +N +VYH
Sbjct: 769 --IL-------EHLRQREF--------IRGPFLVVAPLATLGNWKREIETWTSMNCVVYH 811
Query: 130 AT 131
+
Sbjct: 812 DS 813
>gi|440295604|gb|ELP88516.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
invadens IP1]
Length = 1745
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 101/215 (46%), Positives = 153/215 (71%), Gaps = 4/215 (1%)
Query: 295 ASASRNMLQEYELFFRN-DKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIID 353
+ +R M+Q YE F+ + D+ + K+ KFH L+TT+E++++D L+ +W++ ++D
Sbjct: 685 SKENRQMIQHYEWFYLDKDEKELSKQ---IKFHALVTTYEMVMNDYEALQQIHWQVIVVD 741
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EA RLKN+ KL L + H++LL+GTP+QNN +EL++LLN++ P F + EAF +
Sbjct: 742 EAQRLKNKQSKLNRTLSEIPAYHKILLTGTPIQNNTDELWTLLNYVNPIGFPSIEAFHQK 801
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
FG+ KT EV LQ+ ++P +LRR+K++VEKSI PKEE ++EVELT +QKKYYR + E+N
Sbjct: 802 FGEGKTADEVKSLQVEIQPYLLRRVKQNVEKSIPPKEEILIEVELTLVQKKYYRALYEKN 861
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FL+KG NVP+L+N MM+LRK C HP+L+ G
Sbjct: 862 REFLNKGCVGQNVPHLLNLMMQLRKVCNHPFLIPG 896
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/117 (47%), Positives = 74/117 (63%), Gaps = 18/117 (15%)
Query: 12 PASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNC 71
P W + KS VY+++NTLR YQ+EGLNWL+F+W G+ CILADEMGLGKT+Q +
Sbjct: 584 PDRIWERRMKSDVYRHNNTLREYQIEGLNWLVFNWCRGKGCILADEMGLGKTVQVVAF-- 641
Query: 72 ILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
M +T Q L GPFL++ PLST+ +W+RE WT++NV+VY
Sbjct: 642 -----MEHLRTFQKLP-----------GPFLIVTPLSTLEHWRREICEWTEMNVVVY 682
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRK 195
GPFL++ PLST+ +W+RE WT++NV+VY G ++
Sbjct: 653 GPFLIVTPLSTLEHWRREICEWTEMNVVVYLGSKE 687
>gi|397579592|gb|EJK51267.1| hypothetical protein THAOC_29580 [Thalassiosira oceanica]
Length = 2323
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 141/192 (73%)
Query: 317 IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEH 376
+K + + KF ++ITT+E+++ D L W+ I+DEAHRLKN +L + L + +
Sbjct: 835 LKRESITKFQLMITTYEVVLKDANILAKIKWKALIVDEAHRLKNVQSRLFQDLVSVPRDF 894
Query: 377 RVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLR 436
+LL+GTPLQN+ EL++LLNF +P+ F + + F+ +FGQL++ +V+KL +L+P +LR
Sbjct: 895 CLLLTGTPLQNSTEELWALLNFSDPETFGSKDDFVDQFGQLESAKQVSKLHNVLRPYLLR 954
Query: 437 RLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMEL 496
R+KEDVEK++ PKEET++EV LT IQK++Y+ I ERN SFL KG+ +N P+LMN MMEL
Sbjct: 955 RVKEDVEKALPPKEETILEVTLTPIQKQFYKAIYERNTSFLYKGSKPSNAPSLMNVMMEL 1014
Query: 497 RKCCIHPYLLNG 508
RKCC HP+L+ G
Sbjct: 1015 RKCCNHPFLIKG 1026
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 10/111 (9%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEM-------GLGKTIQSLTRNCIL--ADEMGLGK 81
LR YQLEG+NWL+++W+N R+CILADE+ + T +L+ + + A E
Sbjct: 698 LRGYQLEGVNWLLWNWYNERSCILADEVCPNVLINDMHNTKLNLSTSIVFRWAWEKPSSV 757
Query: 82 TIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
TI L + + T I+GPFLV+APLS + W+ E W D+N IVYH +
Sbjct: 758 TIGFLHQLQRIPDTKIKGPFLVVAPLSLVSQWESETREWAPDMNCIVYHGS 808
>gi|299470515|emb|CBN78506.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 2647
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 132/188 (70%), Gaps = 3/188 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KFH+LITT+E+ + D EL +W++ ++DEAHRLKN KL + L L +H +LL+GT
Sbjct: 795 KFHILITTYEVALKDVRELSRIHWKVLVVDEAHRLKNCGSKLFQELGSLPRDHSLLLTGT 854
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVE 443
PLQN EL++LLNF + QF + + F +FG LK S+V KL +L+P +LRR+KEDVE
Sbjct: 855 PLQNRTEELWALLNFADSHQFFDQQGFKEQFGDLKGSSQVAKLHEMLRPYLLRRVKEDVE 914
Query: 444 KSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRK---CC 500
KS+ PKEET+VEV LT +Q+++YR I E+N FL KG + P+LMN MMELRK CC
Sbjct: 915 KSLPPKEETIVEVSLTPVQRQFYRAIYEKNTQFLFKGARPVHAPSLMNIMMELRKGGVCC 974
Query: 501 IHPYLLNG 508
HP+L G
Sbjct: 975 NHPFLNRG 982
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 69/126 (54%), Gaps = 23/126 (18%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
TLR YQLEG+NWL+++W+N R+ ILADEMGL GKTIQ++ F+
Sbjct: 716 TLRDYQLEGVNWLLWNWWNHRSSILADEMGL-------------------GKTIQTVGFL 756
Query: 90 DAVFK---TGIRGPFLVIAPLSTIPNWQRE-FEAWTDLNVIVYHATFVVLLQTGSKFFRI 145
D ++ T IRGPF ++APLS + WQ E A + + T+ V L+ + RI
Sbjct: 757 DQLWNHKLTNIRGPFCIVAPLSLVAQWQSEKLRAAGRVKFHILITTYEVALKDVRELSRI 816
Query: 146 CLEFFV 151
+ V
Sbjct: 817 HWKVLV 822
>gi|328868264|gb|EGG16642.1| chromo domain-containing protein [Dictyostelium fasciculatum]
Length = 2319
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 143/192 (74%), Gaps = 1/192 (0%)
Query: 318 KEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHR 377
K+K +Y+F +L+TT+E ++++ +L NWR ++DE HR+KN K+L L+ + EH
Sbjct: 686 KDKGVYQFEILLTTYETVMAEHQDLVKINWRALVLDEGHRIKNTQSKVLSKLKSIKTEHS 745
Query: 378 VLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRR 437
V+L+GTPLQN++ EL+++LNFL+P +F+++ F+ EF LK ES+V +L +L P +LRR
Sbjct: 746 VILTGTPLQNDMKELWTMLNFLDPDKFASSTQFLDEFSDLKEESQVQRLHQILAPYLLRR 805
Query: 438 LKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTS-ANVPNLMNTMMEL 496
+KEDVE SI KEETV++VEL++IQK YYR ILE+N FL++G S +N+P L N M+++
Sbjct: 806 MKEDVELSIPIKEETVIQVELSSIQKTYYRAILEKNREFLARGVKSKSNLPKLTNIMIQI 865
Query: 497 RKCCIHPYLLNG 508
RK C HP+L+ G
Sbjct: 866 RKVCNHPFLIPG 877
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 69/109 (63%), Gaps = 18/109 (16%)
Query: 23 PVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKT 82
P +K +L+ +Q+EG WL ++W++ R+ +LADEMGLGKTIQS
Sbjct: 581 PKFKGSLSLKEFQVEGFLWLSYNWYHERSSLLADEMGLGKTIQS---------------- 624
Query: 83 IQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHAT 131
I LT++ GI+GPF+V+APLST+ NWQ+E WTD+ V+V++ T
Sbjct: 625 IAFLTYLSQ--SVGIKGPFMVVAPLSTLGNWQKEILKWTDMRVLVFYGT 671
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 32/38 (84%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRK 195
GI+GPF+V+APLST+ NWQ+E WTD+ V+V++G ++
Sbjct: 636 GIKGPFMVVAPLSTLGNWQKEILKWTDMRVLVFYGTQE 673
>gi|300120100|emb|CBK19654.2| unnamed protein product [Blastocystis hominis]
Length = 1570
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 137/185 (74%), Gaps = 2/185 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
+F VLIT +EI + + L+ W I+DEAHRLK +N KL E LR ++ +VLL+GT
Sbjct: 175 EFDVLITNYEICLVESALLQSIPWSGVIVDEAHRLKGKNNKLGEMLRTMNFGCKVLLTGT 234
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVE 443
PLQNN EL++LLNFL+P++F + + F +EFG ++ +++ KL LLKP+MLRR+KEDVE
Sbjct: 235 PLQNNTEELWTLLNFLQPERFGDVDQFQAEFGDMRGVAQLEKLHTLLKPLMLRRMKEDVE 294
Query: 444 KSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHP 503
KS+ PKEETV+ VE+T +QKK+YR + +RN S + G S N+P+L+N MME+RKCC HP
Sbjct: 295 KSLKPKEETVINVEMTAMQKKFYRAVYDRNTSVI--GNESKNLPSLINIMMEIRKCCNHP 352
Query: 504 YLLNG 508
YL+ G
Sbjct: 353 YLIRG 357
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 80/128 (62%), Gaps = 18/128 (14%)
Query: 4 IKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKT 63
I P +PP + K++K+ +K+ N LR+YQ+EG+NWL+++W N RN ILADEMGLGKT
Sbjct: 48 IHDPNYRPPLQKYEKIDKNAEFKDGNQLRSYQIEGVNWLLWNWINNRNSILADEMGLGKT 107
Query: 64 IQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDL 123
QS +L + K ++ PF+V+AP+ST+P+W+ E WTD+
Sbjct: 108 AQS------------------TLFMYTVLKKYKLKYPFIVVAPVSTLPHWEAEIRRWTDM 149
Query: 124 NVIVYHAT 131
+V+++H T
Sbjct: 150 HVVIFHGT 157
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 32/44 (72%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F + K ++ PF+V+AP+ST+P+W+ E WTD++V+++HG
Sbjct: 113 FMYTVLKKYKLKYPFIVVAPVSTLPHWEAEIRRWTDMHVVIFHG 156
>gi|325181157|emb|CCA15572.1| CHROMODOMAIN HELICASE DNA BINDING putative [Albugo laibachii Nc14]
Length = 1918
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/191 (53%), Positives = 139/191 (72%), Gaps = 2/191 (1%)
Query: 320 KDLYKFHVLITTFEII-ISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLR-LLHLEHR 377
+ +F VLITTFE++ SD L +W++ ++DEAHRLKN N K +R + ++
Sbjct: 547 RQFIRFDVLITTFEMLGASDSHRLSRIDWQVVVVDEAHRLKNFNSKSANIMRKSIKYQNI 606
Query: 378 VLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRR 437
+LL+GTPLQNNV EL++LL+ L+ +F + EAF+ E+G LK S+V KL LKP +LRR
Sbjct: 607 LLLTGTPLQNNVEELWTLLHLLDRGRFRSKEAFLEEYGDLKEHSQVEKLHADLKPYLLRR 666
Query: 438 LKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELR 497
LKEDVE S+APKEET++EVELT +QK+YYR I ERN +FL +G A+ P+LMN MMELR
Sbjct: 667 LKEDVEASLAPKEETIIEVELTVLQKQYYRAIYERNVAFLIRGGRRADGPSLMNVMMELR 726
Query: 498 KCCIHPYLLNG 508
KCC HP+L+ G
Sbjct: 727 KCCNHPFLIKG 737
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 76/129 (58%), Gaps = 20/129 (15%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR YQL G+NW++F+W++ RN +LADEMGL GKT+Q++TF++
Sbjct: 400 LRDYQLTGVNWMLFNWYHSRNSMLADEMGL-------------------GKTVQTVTFIN 440
Query: 91 AVFKT-GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVVLLQTGSKFFRICLEF 149
+ T G+ GP+L+IAPLST+ +WQREF W LN +VYH T+ F + +
Sbjct: 441 HLATTEGLPGPYLIIAPLSTLAHWQREFSNWCCLNAVVYHGTYEARKLIEKHEFYLTAKE 500
Query: 150 FVDAVFKTG 158
F DA+ G
Sbjct: 501 FGDAMLSMG 509
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 150 FVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F++ + T G+ GP+L+IAPLST+ +WQREF W LN +VYHG
Sbjct: 438 FINHLATTEGLPGPYLIIAPLSTLAHWQREFSNWCCLNAVVYHG 481
>gi|67474889|ref|XP_653178.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56470108|gb|EAL47792.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449706113|gb|EMD46028.1| chromodomain helicase DNA binding protein, putative [Entamoeba
histolytica KU27]
Length = 1641
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 149/211 (70%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+R ++Q YE F+ N + I ++ KFH LITT+E+I+SD L +W++ ++DEA R
Sbjct: 734 NRQLIQHYEWFYLNKDEKEISKQ--IKFHALITTYEMIMSDYEILSQIHWQVTVVDEAQR 791
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN++ KL + L + H++LL+GTP+QNN++EL++LLNF+ P+ F + E F +FG
Sbjct: 792 LKNKSSKLNKTLTEIPSYHKILLTGTPIQNNIDELWTLLNFINPENFPSLENFHEKFGDA 851
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KT V LQ ++P +LRR+K +VEKSI PKEE ++EVELT +QKKYYR + ++N FL
Sbjct: 852 KTADGVKALQTEIQPYLLRRVKGNVEKSIPPKEEILIEVELTLVQKKYYRALYDKNREFL 911
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG +NVP+L N M++LRK C HP+L+ G
Sbjct: 912 NKGCVGSNVPHLQNLMIQLRKVCNHPFLIPG 942
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 80/123 (65%), Gaps = 20/123 (16%)
Query: 10 KPPASDWV-KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
+PP D + ++++ P Y++DNTLR+YQ+EGLNWL+F+W G+ CILADEMGLGKT+Q +
Sbjct: 628 EPPLPDRLWQVQEHP-YRHDNTLRSYQMEGLNWLVFNWCRGKGCILADEMGLGKTVQVVA 686
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
L ++ Q L GPFLV+ PLST+ +W+RE WTD+NV+VY
Sbjct: 687 FFEHL-------RSFQKLP-----------GPFLVVTPLSTLEHWRREINEWTDMNVVVY 728
Query: 129 HAT 131
T
Sbjct: 729 LGT 731
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRK 195
GPFLV+ PLST+ +W+RE WTD+NV+VY G ++
Sbjct: 699 GPFLVVTPLSTLEHWRREINEWTDMNVVVYLGTKE 733
>gi|407037695|gb|EKE38751.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
nuttalli P19]
Length = 1627
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 149/211 (70%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+R ++Q YE F+ N + I ++ KFH LITT+E+I+SD L +W++ ++DEA R
Sbjct: 734 NRQLIQHYEWFYLNKDEKEISKQ--IKFHALITTYEMIMSDYEILSQIHWQVTVVDEAQR 791
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN++ KL + L + H++LL+GTP+QNN++EL++LLNF+ P+ F + E F +FG
Sbjct: 792 LKNKSSKLNKTLTEIPSYHKILLTGTPIQNNIDELWTLLNFINPENFPSLENFHEKFGDA 851
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KT V LQ ++P +LRR+K +VEKSI PKEE ++EVELT +QKKYYR + ++N FL
Sbjct: 852 KTADGVKALQTEIQPYLLRRVKGNVEKSIPPKEEILIEVELTLVQKKYYRALYDKNREFL 911
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG +NVP+L N M++LRK C HP+L+ G
Sbjct: 912 NKGCVGSNVPHLQNLMIQLRKVCNHPFLIPG 942
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 80/123 (65%), Gaps = 20/123 (16%)
Query: 10 KPPASDWV-KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
+PP D + ++++ P Y++DNTLR+YQ+EGLNWL+F+W G+ CILADEMGLGKT+Q +
Sbjct: 628 EPPLPDRLWQVQEHP-YRHDNTLRSYQMEGLNWLVFNWCRGKGCILADEMGLGKTVQVVA 686
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
L ++ Q L GPFLV+ PLST+ +W+RE WTD+NV+VY
Sbjct: 687 FFEHL-------RSFQKLP-----------GPFLVVTPLSTLEHWRREINEWTDMNVVVY 728
Query: 129 HAT 131
T
Sbjct: 729 LGT 731
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRK 195
GPFLV+ PLST+ +W+RE WTD+NV+VY G ++
Sbjct: 699 GPFLVVTPLSTLEHWRREINEWTDMNVVVYLGTKE 733
>gi|224013614|ref|XP_002296471.1| chromodomain-helicase [Thalassiosira pseudonana CCMP1335]
gi|220968823|gb|EED87167.1| chromodomain-helicase [Thalassiosira pseudonana CCMP1335]
Length = 690
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 144/218 (66%), Gaps = 12/218 (5%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R++L+EYE ++ + + D KF+VL+TT++ +I D + D WR+ ++DEAHRL
Sbjct: 168 RDVLREYEWYYEDRPHT----PDYLKFNVLVTTYDTLIGDFDVIGDVPWRVTVVDEAHRL 223
Query: 359 KNRNCKLLEGLRLLH--------LEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAF 410
+N KLLE ++ + + RVL++GTPLQNN EL++LLNF+EP F + E F
Sbjct: 224 RNVKGKLLECMKEISAKGTLKYGYQSRVLMTGTPLQNNTQELWTLLNFIEPSLFQSLEEF 283
Query: 411 MSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGIL 470
FG + +V LQ + P MLRR+KEDV K I KEETV++VELT+IQK+YYR I
Sbjct: 284 EHNFGNMANREQVEALQHKISPFMLRRVKEDVAKDIPAKEETVIDVELTSIQKQYYRAIF 343
Query: 471 ERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
E N +FLS G++ A P LMN MELRKCC HP+LL+G
Sbjct: 344 EHNHAFLSMGSSKAVAPKLMNIQMELRKCCNHPFLLDG 381
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 67/107 (62%), Gaps = 11/107 (10%)
Query: 24 VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTI 83
+YK+ + LR YQ++G+NWL ++ ILADEMGLG C+ +T+
Sbjct: 65 IYKDGHKLRDYQVDGVNWLSSCYYKRTGAILADEMGLG------AHPCLSL----YPRTV 114
Query: 84 QSLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
Q +T+++ +F+ + GPFLV+ PLST+ +W+REFE WT+L VYH
Sbjct: 115 QIVTYLEHLFRVEKLNGPFLVVVPLSTVEHWRREFEGWTNLQCCVYH 161
>gi|167392422|ref|XP_001740146.1| chromodomain helicase DNA binding protein [Entamoeba dispar SAW760]
gi|165895824|gb|EDR23413.1| chromodomain helicase DNA binding protein, putative [Entamoeba
dispar SAW760]
Length = 1623
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 148/211 (70%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+R ++Q YE F+ N + I ++ KFH LITT+E+I+SD L W++ ++DEA R
Sbjct: 734 NRQLIQHYEWFYLNKDEKEISKQ--IKFHALITTYEMIMSDYEILSQIRWQVTVVDEAQR 791
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN++ KL + L + H++LL+GTP+QNN++EL++LLNF+ P+ F + E F +FG
Sbjct: 792 LKNKSSKLNKTLTEIPSYHKILLTGTPIQNNIDELWTLLNFINPENFPSLENFHEKFGDA 851
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KT V LQ ++P +LRR+K +VEKSI PKEE ++EVELT +QKKYYR + ++N FL
Sbjct: 852 KTADGVKALQTEIQPYLLRRVKGNVEKSIPPKEEILIEVELTLVQKKYYRALYDKNREFL 911
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG +NVP+L N M++LRK C HP+L+ G
Sbjct: 912 NKGCVGSNVPHLQNLMIQLRKVCNHPFLIPG 942
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 80/123 (65%), Gaps = 20/123 (16%)
Query: 10 KPPASDWV-KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
+PP D + ++++ P Y++DNTLR+YQ+EGLNWL+F+W G+ CILADEMGLGKT+Q +
Sbjct: 628 EPPLPDRLWQVQEHP-YRHDNTLRSYQMEGLNWLVFNWCRGKGCILADEMGLGKTVQVVA 686
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
L ++ Q L GPFLV+ PLST+ +W+RE WTD+NV+VY
Sbjct: 687 FFEHL-------RSFQKLP-----------GPFLVVTPLSTLEHWRREINEWTDMNVVVY 728
Query: 129 HAT 131
T
Sbjct: 729 LGT 731
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRK 195
GPFLV+ PLST+ +W+RE WTD+NV+VY G ++
Sbjct: 699 GPFLVVTPLSTLEHWRREINEWTDMNVVVYLGTKE 733
>gi|300121547|emb|CBK22066.2| unnamed protein product [Blastocystis hominis]
Length = 787
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 135/185 (72%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
+F +L+TTF+I I++ L +W ++DEAHRLK +N KL + L+ + ++LL+GT
Sbjct: 266 EFDILLTTFQICIAEAAALSSISWAGLVVDEAHRLKGKNNKLGDVLKKIDFGCKLLLTGT 325
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVE 443
PLQNN EL+ LLNFL+P++F + E F ++FG +K +++ KL LLKP+MLRR+KEDVE
Sbjct: 326 PLQNNTEELWILLNFLQPERFHDAEQFQADFGDMKVAAQLEKLHTLLKPLMLRRMKEDVE 385
Query: 444 KSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHP 503
KS+ PKEETV+ VE+T +QKK+YR + + N S S T S N+P+LMN MELRKCC HP
Sbjct: 386 KSLKPKEETVINVEMTAMQKKFYRAVYDHNTSVRSVSTDSKNLPSLMNITMELRKCCNHP 445
Query: 504 YLLNG 508
+L+ G
Sbjct: 446 FLIRG 450
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 18/124 (14%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQS 66
P +PP + + K+ + N LR YQ+EG+NW++++WFN RN ILADEMGLGKT+QS
Sbjct: 142 PHDRPPLAQFRKVNPEEIPTKGNQLRPYQVEGVNWMLWNWFNNRNSILADEMGLGKTVQS 201
Query: 67 LTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVI 126
+L + + + PFL++APLST+P+W+ E WTDL+V+
Sbjct: 202 ------------------TLFIQQILHRYKTKPPFLIVAPLSTLPHWEAEIARWTDLHVV 243
Query: 127 VYHA 130
V+H
Sbjct: 244 VFHG 247
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F + + + PFL++APLST+P+W+ E WTDL+V+V+HGR + SRR
Sbjct: 204 FIQQILHRYKTKPPFLIVAPLSTLPHWEAEIARWTDLHVVVFHGRVE--SRR 253
>gi|66800671|ref|XP_629261.1| chromo domain-containing protein [Dictyostelium discoideum AX4]
gi|60462656|gb|EAL60858.1| chromo domain-containing protein [Dictyostelium discoideum AX4]
Length = 3071
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 136/192 (70%), Gaps = 1/192 (0%)
Query: 318 KEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHR 377
K KD Y F VL+TT+E I+SD WR I+DE HR+KN K+L L+ + EH
Sbjct: 993 KHKDTYLFEVLLTTYETIMSDHSSFVRVPWRALILDEGHRIKNDKSKVLSKLKSIKTEHS 1052
Query: 378 VLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRR 437
++L+GTPLQN++ EL+++LNFL+P +F++ + F+ E+ LK ES+V+KL LL P +LRR
Sbjct: 1053 IILTGTPLQNDMKELWTMLNFLDPDKFNSCQEFLDEYSDLKEESQVSKLHQLLSPYLLRR 1112
Query: 438 LKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKG-TTSANVPNLMNTMMEL 496
+KEDVE SI KEETV++VEL++ QK YYR ILERN FLS+G N+P L N M+++
Sbjct: 1113 MKEDVELSIPIKEETVIQVELSSTQKTYYRAILERNREFLSRGIKQKTNLPKLSNIMIQI 1172
Query: 497 RKCCIHPYLLNG 508
RK C HP+L+ G
Sbjct: 1173 RKVCNHPFLIPG 1184
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 68/109 (62%), Gaps = 18/109 (16%)
Query: 23 PVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKT 82
P ++++ +L+ +Q+EG WL + W++ R+ +LADEMGLGKTIQS+ L+
Sbjct: 890 PKFQDNLSLKEFQVEGFLWLSYCWYHCRSSLLADEMGLGKTIQSIAFLQYLS-------- 941
Query: 83 IQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHAT 131
QS+ GI+GPFLV+APLST+ NW +E WT + +V++ +
Sbjct: 942 -QSV---------GIKGPFLVVAPLSTLGNWHKEILKWTKMKTLVFYGS 980
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRK 195
GI+GPFLV+APLST+ NW +E WT + +V++G ++
Sbjct: 945 GIKGPFLVVAPLSTLGNWHKEILKWTKMKTLVFYGSQE 982
>gi|428181241|gb|EKX50105.1| hypothetical protein GUITHDRAFT_67166 [Guillardia theta CCMP2712]
Length = 958
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/226 (45%), Positives = 148/226 (65%), Gaps = 17/226 (7%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDC-----LELKDFNWRLCII 352
SR +L +E ++ ++K + I D YKF+VLITT+EI++ + L D W I+
Sbjct: 452 SREILINHEFYYYDEKGKRIN--DCYKFNVLITTWEIVMKEDERGNKANLADMPWDCVIV 509
Query: 353 DEAHRLKNRNCKLLEGLRLLHL----------EHRVLLSGTPLQNNVNELFSLLNFLEPQ 402
DEAHRLKN++ K L+ H +L++GTPLQNN EL+ LLNFL P+
Sbjct: 510 DEAHRLKNKDSKTFTTLKSFKTIPPCTNPENEAHCILMTGTPLQNNTEELWCLLNFLAPK 569
Query: 403 QFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQ 462
QF + +AF+++FG ++T +++ +L+ L+P MLRR KEDVE+SI PKEE +VEVE++ +Q
Sbjct: 570 QFDDVDAFLNKFGVVETANQIMQLRKELRPYMLRRHKEDVERSIPPKEEIIVEVEMSQLQ 629
Query: 463 KKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+ Y+ ILERNF +L +G VP L N MELRKCC HPYL++G
Sbjct: 630 RTTYKSILERNFEWLKRGAAGVQVPALRNVEMELRKCCNHPYLVDG 675
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 79/122 (64%), Gaps = 20/122 (16%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
KPP D K EK P +K+ N LR YQ EG+NWL+F+W+ R ILADEMG
Sbjct: 346 KPPPRDKRKREKRPPFKDQNVLREYQKEGVNWLIFNWYQRRGSILADEMG---------- 395
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIR-GPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
LGKT+Q++ F++ +F+ R GPFLV+APLSTIP+W REFEAWT+LN IV+
Sbjct: 396 ---------LGKTVQAVGFLEWLFQCRNRTGPFLVVAPLSTIPHWLREFEAWTNLNAIVF 446
Query: 129 HA 130
H
Sbjct: 447 HG 448
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 37/44 (84%), Gaps = 1/44 (2%)
Query: 150 FVDAVFKTGIR-GPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F++ +F+ R GPFLV+APLSTIP+W REFEAWT+LN IV+HG
Sbjct: 405 FLEWLFQCRNRTGPFLVVAPLSTIPHWLREFEAWTNLNAIVFHG 448
>gi|378755777|gb|EHY65803.1| helicase DNA-binding protein [Nematocida sp. 1 ERTm2]
Length = 1339
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 153/214 (71%), Gaps = 13/214 (6%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ +R ++Q++E FR Q + F V++TT+E+ I+ L ++ + ++DE
Sbjct: 488 SQPAREIMQDFE--FRTATGQLL-------FDVILTTYEMAIAGVDHLSSVSFGVSVLDE 538
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN K + LR + ++H+VLLSGTPLQNN++EL+SLLNF++ ++F + + F+ +
Sbjct: 539 AHRLKNSRSKAAQTLRSIEVDHKVLLSGTPLQNNLSELWSLLNFIDEEKFPSLKYFLDAY 598
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
+++ +V ++QLLLKP+MLRR+K+DVE +I KEET+VEVELT IQK++YR ILE+N
Sbjct: 599 -KMEEADDVERIQLLLKPLMLRRMKDDVE-TIPVKEETIVEVELTMIQKRFYRAILEKNM 656
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FL G ++ PNL+N MMELRKCCIHPYL++G
Sbjct: 657 EFL--GAAGSSTPNLLNIMMELRKCCIHPYLISG 688
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 85/153 (55%), Gaps = 31/153 (20%)
Query: 12 PASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNC 71
P+ D V +S V+K LRAYQ EG++WL+ W ++C
Sbjct: 389 PSRDRVP--ESFVFKGGRELRAYQKEGVSWLVNKWL-------------------FRQSC 427
Query: 72 ILADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
ILADEMGLGKT+QS+ FVD + K G++ P LV+APLSTIP+W+REF AWTDL V+VYH
Sbjct: 428 ILADEMGLGKTVQSVAFVDTIMSKCGMKRPALVVAPLSTIPHWEREFAAWTDLRVLVYHG 487
Query: 131 T---------FVVLLQTGSKFFRICLEFFVDAV 154
+ F TG F + L + A+
Sbjct: 488 SQPAREIMQDFEFRTATGQLLFDVILTTYEMAI 520
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Query: 150 FVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FVD + K G++ P LV+APLSTIP+W+REF AWTDL V+VYHG
Sbjct: 444 FVDTIMSKCGMKRPALVVAPLSTIPHWEREFAAWTDLRVLVYHG 487
>gi|67604075|ref|XP_666591.1| RIKEN cDNA A730019I05 gene [Cryptosporidium hominis TU502]
gi|54657614|gb|EAL36361.1| RIKEN cDNA A730019I05 gene [Cryptosporidium hominis]
Length = 2267
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 135/194 (69%), Gaps = 8/194 (4%)
Query: 323 YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSG 382
YKFHVL+T++EI+++D L W+ IIDEAHRLKNR K L+ + + H +LLSG
Sbjct: 1480 YKFHVLLTSYEILLADADILCTMPWQFVIIDEAHRLKNRGAKTLQVFKSIACRHILLLSG 1539
Query: 383 TPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDV 442
TP+QNN EL+ LLN++EP +F++ EAF EFG+L+T +V+ L LL+P +LRR+KEDV
Sbjct: 1540 TPVQNNTEELWPLLNYIEPIKFASIEAFTQEFGELQTSGQVSALHELLRPHLLRRVKEDV 1599
Query: 443 EKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT--------TSANVPNLMNTMM 494
K I P EET+++VELT QK YYR I ERN +FL K ++A +P+LMN +
Sbjct: 1600 MKEIPPLEETIIDVELTTAQKAYYRAIFERNRAFLCKNVGLGGKRSGSNAPIPSLMNVEV 1659
Query: 495 ELRKCCIHPYLLNG 508
ELRKCC HP+ + G
Sbjct: 1660 ELRKCCNHPFQVVG 1673
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 78/132 (59%), Gaps = 23/132 (17%)
Query: 22 SPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGK 81
SP++KN L YQL GLNWL+ W GRN ILADEMG LGK
Sbjct: 1333 SPIFKNGYQLFDYQLAGLNWLLQLWSEGRNGILADEMG-------------------LGK 1373
Query: 82 TIQSLTFV-DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH---ATFVVLLQ 137
T+Q+++FV V+K +RGPFLV+APLST+ +W+R FE WTDLNV+ Y+ L
Sbjct: 1374 TMQTMSFVWHLVYKEKLRGPFLVVAPLSTLDHWKRTFEDWTDLNVVSYYDEGGRNGRDLL 1433
Query: 138 TGSKFFRICLEF 149
+F+ CL+F
Sbjct: 1434 RHYEFYHQCLQF 1445
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 146 CLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 191
+ F V+K +RGPFLV+APLST+ +W+R FE WTDLNV+ Y+
Sbjct: 1377 TMSFVWHLVYKEKLRGPFLVVAPLSTLDHWKRTFEDWTDLNVVSYY 1422
>gi|66357154|ref|XP_625755.1| chromodomain-helicase-DNA-binding'multidomain chromatin protein with
the following architecture: chromo-bromo-chromo-SNF2
ATpase' [Cryptosporidium parvum Iowa II]
gi|46226948|gb|EAK87914.1| chromodomain-helicase-DNA-binding'multidomain chromatin protein with
the following architecture: chromo-bromo-chromo-SNF2
ATpase' [Cryptosporidium parvum Iowa II]
Length = 2270
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 135/194 (69%), Gaps = 8/194 (4%)
Query: 323 YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSG 382
YKFHVL+T++EI+++D L W+ IIDEAHRLKNR K L+ + + H +LLSG
Sbjct: 1480 YKFHVLLTSYEILLADADILCTMPWQFVIIDEAHRLKNRGAKTLQVFKSIACRHILLLSG 1539
Query: 383 TPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDV 442
TP+QNN EL+ LLN++EP +F++ EAF EFG+L+T +V+ L LL+P +LRR+KEDV
Sbjct: 1540 TPVQNNTEELWPLLNYIEPIKFASIEAFTQEFGELQTSGQVSALHELLRPHLLRRVKEDV 1599
Query: 443 EKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT--------TSANVPNLMNTMM 494
K I P EET+++VELT QK YYR I ERN +FL K ++A +P+LMN +
Sbjct: 1600 MKEIPPLEETIIDVELTTAQKAYYRAIFERNRAFLCKNVGLGGKRSGSNAPIPSLMNVEV 1659
Query: 495 ELRKCCIHPYLLNG 508
ELRKCC HP+ + G
Sbjct: 1660 ELRKCCNHPFQVVG 1673
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 78/132 (59%), Gaps = 23/132 (17%)
Query: 22 SPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGK 81
SP++KN L YQL GLNWL+ W GRN ILADEMG LGK
Sbjct: 1333 SPIFKNGYQLFDYQLAGLNWLLQLWSEGRNGILADEMG-------------------LGK 1373
Query: 82 TIQSLTFV-DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH---ATFVVLLQ 137
T+Q+++FV V+K +RGPFLV+APLST+ +W+R FE WTDLNV+ Y+ L
Sbjct: 1374 TMQTMSFVWHLVYKEKLRGPFLVVAPLSTLDHWKRTFEDWTDLNVVSYYDEGGRNGRDLL 1433
Query: 138 TGSKFFRICLEF 149
+F+ CL+F
Sbjct: 1434 RHYEFYHQCLQF 1445
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 146 CLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 191
+ F V+K +RGPFLV+APLST+ +W+R FE WTDLNV+ Y+
Sbjct: 1377 TMSFVWHLVYKEKLRGPFLVVAPLSTLDHWKRTFEDWTDLNVVSYY 1422
>gi|291001481|ref|XP_002683307.1| chromodomain helicase DNA binding protein [Naegleria gruberi]
gi|284096936|gb|EFC50563.1| chromodomain helicase DNA binding protein [Naegleria gruberi]
Length = 1800
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 148/218 (67%), Gaps = 6/218 (2%)
Query: 296 SASRNMLQEYELFFRNDKN-QFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ SR +++ +E FF++ K I + YKF+VLITT+EI++++ L W+ ++DE
Sbjct: 438 TQSREVMKNHEFFFKHPKTGNLIYHQKTYKFNVLITTYEIVMAESSYLSKIPWQYLVVDE 497
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
HRLKN N KL + L+ + H++LL+GTP+QNN+ ELFSLL FL+P+ F + + F E+
Sbjct: 498 GHRLKNHNSKLAQILKNFNAVHKLLLTGTPIQNNLTELFSLLQFLDPETFYDLDVFSEEY 557
Query: 415 GQLKTESEVNKLQ---LLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
G L ES KL+ L+ P +LRRLKEDVEKSI PKEE VVEV T+IQK Y + I +
Sbjct: 558 GNL-GESGSEKLEGLHKLISPYILRRLKEDVEKSIPPKEEIVVEVVPTSIQKAYEQAIFK 616
Query: 472 RNFSFLSKGTT-SANVPNLMNTMMELRKCCIHPYLLNG 508
RN FL KG + S NVP L N +MELRK C HP+L++G
Sbjct: 617 RNREFLMKGVSKSQNVPKLNNVLMELRKVCNHPFLISG 654
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/121 (50%), Positives = 81/121 (66%), Gaps = 18/121 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P + KLE+SP +++ N LR YQLEGLNWL+F W+ RN ILADEMGLGKT+Q
Sbjct: 334 RPAPHKFKKLEESPSFRDGNQLREYQLEGLNWLVFCWYQRRNSILADEMGLGKTVQ---- 389
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
T+ +L ++ A IRGPF+VIAPLST+ +W+REFE WTD+NV+V+H
Sbjct: 390 ------------TVATLEYLRAF--EHIRGPFIVIAPLSTVEHWKREFENWTDMNVLVFH 435
Query: 130 A 130
Sbjct: 436 G 436
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 32/34 (94%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
IRGPF+VIAPLST+ +W+REFE WTD+NV+V+HG
Sbjct: 403 IRGPFIVIAPLSTVEHWKREFENWTDMNVLVFHG 436
>gi|330793226|ref|XP_003284686.1| hypothetical protein DICPUDRAFT_53111 [Dictyostelium purpureum]
gi|325085384|gb|EGC38792.1| hypothetical protein DICPUDRAFT_53111 [Dictyostelium purpureum]
Length = 2666
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 139/197 (70%), Gaps = 1/197 (0%)
Query: 313 KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLL 372
K +F KD Y F VL+TT+E I+SD WR ++DE HR+KN K+L L+ +
Sbjct: 761 KYEFKAGKDNYLFEVLLTTYETIMSDHSVFVRVPWRALVLDEGHRIKNEKSKVLSKLKSI 820
Query: 373 HLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKP 432
EH V+L+GTPLQN++ EL+++LNFL+P++F N F++E+ LK ES+V+KL LL P
Sbjct: 821 KTEHSVILTGTPLQNDMKELWTMLNFLDPEKFDNCNDFLNEYSDLKEESQVSKLHQLLTP 880
Query: 433 MMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTT-SANVPNLMN 491
+LRR+KE+VE SI KEETV++VEL++ QK YYR ILERN FL++G +N+P L N
Sbjct: 881 YLLRRMKENVELSIPIKEETVIQVELSSTQKTYYRAILERNREFLARGIRHKSNLPKLSN 940
Query: 492 TMMELRKCCIHPYLLNG 508
M+++RK C HP+L+ G
Sbjct: 941 IMIQIRKVCNHPFLIPG 957
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 69/109 (63%), Gaps = 18/109 (16%)
Query: 23 PVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKT 82
P +K + +L+ +Q+EG WL + W+ GR+ +LADEMGLGKTIQ++
Sbjct: 662 PKFKGELSLKDFQVEGFLWLTYCWYQGRSSLLADEMGLGKTIQTIA-------------F 708
Query: 83 IQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHAT 131
IQ L+ K GI+GPFL++APLST+ NW +EF WTD+ +VY+ +
Sbjct: 709 IQYLS-----QKVGIKGPFLIVAPLSTLGNWHKEFLKWTDMKTLVYYGS 752
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 156 KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLS 198
K GI+GPFL++APLST+ NW +EF WTD+ +VY+G ++ S
Sbjct: 715 KVGIKGPFLIVAPLSTLGNWHKEFLKWTDMKTLVYYGSQETRS 757
>gi|209882027|ref|XP_002142451.1| SNF2/RAD54 helicase family protein [Cryptosporidium muris RN66]
gi|209558057|gb|EEA08102.1| SNF2/RAD54 helicase family protein [Cryptosporidium muris RN66]
Length = 1877
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/193 (49%), Positives = 133/193 (68%), Gaps = 7/193 (3%)
Query: 323 YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSG 382
YKFH+L+T++EI+++D L W+ +IDEAHRLKNR K L+ + + H +LLSG
Sbjct: 1142 YKFHILLTSYEILLADADILCIMPWQFVVIDEAHRLKNRGAKTLQVFKSIACRHILLLSG 1201
Query: 383 TPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDV 442
TP+QNN EL+ LLN++EP +F++ E F EFG L++ ++V+ L LL+P +LRR+KEDV
Sbjct: 1202 TPVQNNTEELWPLLNYIEPIKFASIETFTQEFGDLQSSAQVSALHELLRPHLLRRVKEDV 1261
Query: 443 EKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTT-------SANVPNLMNTMME 495
K I P EET+++VELT QK YYR I ERN +FL K T N+P+LMN +E
Sbjct: 1262 MKEIPPLEETIIDVELTTAQKAYYRAIFERNRAFLCKNVTVGGKKVGVGNIPSLMNVEVE 1321
Query: 496 LRKCCIHPYLLNG 508
LRKCC HP+ + G
Sbjct: 1322 LRKCCNHPFQVVG 1334
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 69/109 (63%), Gaps = 20/109 (18%)
Query: 22 SPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGK 81
SP++K+ L YQL GLNWL+ W GRN ILADEMG LGK
Sbjct: 997 SPIFKSGYQLFDYQLAGLNWLLQLWSEGRNGILADEMG-------------------LGK 1037
Query: 82 TIQSLTFV-DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
T+Q+++F+ V+K RGPFL++APLST+ +W+R FE WTDLNV+ Y+
Sbjct: 1038 TMQTMSFIWHLVYKEKYRGPFLIVAPLSTLDHWKRTFEDWTDLNVVSYY 1086
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 146 CLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 191
+ F V+K RGPFL++APLST+ +W+R FE WTDLNV+ Y+
Sbjct: 1041 TMSFIWHLVYKEKYRGPFLIVAPLSTLDHWKRTFEDWTDLNVVSYY 1086
>gi|387593217|gb|EIJ88241.1| helicase DNA-binding protein [Nematocida parisii ERTm3]
gi|387596071|gb|EIJ93693.1| helicase DNA-binding protein [Nematocida parisii ERTm1]
Length = 1336
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 151/214 (70%), Gaps = 13/214 (6%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ +R ++ ++E FR Q + F V++TT+E+ I+ L ++ + ++DE
Sbjct: 485 SQPAREIMLDFE--FRTPAGQLL-------FDVILTTYEMAIAGVEHLSSISFGVSVLDE 535
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN K + LR + ++H+VLLSGTPLQNN++EL+SLLNF++ ++F + + F+ +
Sbjct: 536 AHRLKNSRSKAAQTLRSIEVDHKVLLSGTPLQNNLSELWSLLNFIDEEKFPSLKYFLDAY 595
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
+++ +V ++QLLLKP+MLRR+K+DVE SI KEET+VEVELT IQK++YR ILE+N
Sbjct: 596 -KMEEADDVERIQLLLKPLMLRRMKDDVE-SIPVKEETIVEVELTMIQKRFYRAILEKNM 653
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
FL G ++ PNL+N MMELRKCCIHPYL+ G
Sbjct: 654 EFL--GAAGSSTPNLLNIMMELRKCCIHPYLIAG 685
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 76/121 (62%), Gaps = 22/121 (18%)
Query: 12 PASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNC 71
P+ D V +S V+K LRAYQ EG++WL+ W ++C
Sbjct: 386 PSRDRVP--ESFVFKGGRELRAYQKEGVSWLVNKWL-------------------FRQSC 424
Query: 72 ILADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
ILADEMGLGKT+QS+ FVD + K G++ P LV+APLSTIP+W+REF AWTDL V+VYH
Sbjct: 425 ILADEMGLGKTVQSVAFVDTIISKCGLKRPALVVAPLSTIPHWEREFAAWTDLRVLVYHG 484
Query: 131 T 131
+
Sbjct: 485 S 485
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Query: 150 FVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FVD + K G++ P LV+APLSTIP+W+REF AWTDL V+VYHG
Sbjct: 441 FVDTIISKCGLKRPALVVAPLSTIPHWEREFAAWTDLRVLVYHG 484
>gi|300122623|emb|CBK23191.2| unnamed protein product [Blastocystis hominis]
Length = 1548
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 139/208 (66%), Gaps = 5/208 (2%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R ++Q Y FF+ + + LYKF+VL+TT+E+++ D L D W ++DEAHR+
Sbjct: 801 RQLIQAYNWFFKG-----LPARGLYKFNVLLTTYEVVMKDWGVLGDIAWEGVVMDEAHRM 855
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK 418
+N NCK ++ + + EH++LL+GTPLQNN EL+ LLNF+E ++ F FG L+
Sbjct: 856 RNNNCKFMQFISKVKTEHKLLLTGTPLQNNTGELWPLLNFIEVKEAGTMARFKEAFGDLR 915
Query: 419 TESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS 478
+ +V KL+ LL MLRR+KEDVEKSI K+ET++ ++LT QK+YY+ I +RN SFL
Sbjct: 916 SNEQVEKLRALLASCMLRRVKEDVEKSIPRKQETIIVMQLTTTQKQYYKAIYDRNRSFLY 975
Query: 479 KGTTSANVPNLMNTMMELRKCCIHPYLL 506
KG + VP+LM+ +LRK C HP+L+
Sbjct: 976 KGCKKSTVPSLMHIETQLRKVCNHPFLI 1003
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 60/115 (52%), Gaps = 22/115 (19%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ--SLTRNCILAD 75
+ E SP YKND LR YQ+ LNW++ W IL DEMGLGKTIQ +L + I +
Sbjct: 699 RYESSPTYKNDLRLRDYQVVSLNWMVEKWRAHEGMILGDEMGLGKTIQVIALLHHFITVE 758
Query: 76 EMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
GP+LVI+PLST+ NW REF WT + V YH+
Sbjct: 759 NQ--------------------EGPYLVISPLSTLKNWLREFATWTSIRVCCYHS 793
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 25/40 (62%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
GP+LVI+PLST+ NW REF WT + V YH K R
Sbjct: 762 GPYLVISPLSTLKNWLREFATWTSIRVCCYHSEGKGKDER 801
>gi|397611113|gb|EJK61181.1| hypothetical protein THAOC_18377, partial [Thalassiosira oceanica]
Length = 1808
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 148/229 (64%), Gaps = 19/229 (8%)
Query: 299 RNMLQEYELFFRNDK------NQFIKEK-------DLYK---FHVLITTFEIII-SDCLE 341
RN +E E F +D+ NQ+ +K D K V+ITT EI+I SD E
Sbjct: 469 RNRAREDEFAFPSDRVDAVGMNQYYLQKVARQWRADWQKQWMVEVVITTPEIMIASDWPE 528
Query: 342 LKDFNWRLCIIDEAHRLKNRNCKLLEGLR--LLHLEHRVLLSGTPLQNNVNELFSLLNFL 399
LK W + ++DEAHRLKN KL + LR H +LL+GTP+QNN+ EL++LLNF+
Sbjct: 529 LKAIEWEIIVVDEAHRLKNHQSKLAQNLRDERFVFNHALLLTGTPIQNNMQELWTLLNFV 588
Query: 400 EPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELT 459
EP F + F+ ++G +K++ +V++L ++P +LRRLKEDVEKS+ PKEET++EVELT
Sbjct: 589 EPDTFDSLSDFLDDYGDIKSKEKVDELHESIRPFILRRLKEDVEKSVPPKEETLIEVELT 648
Query: 460 NIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+QK+YYR + E+N FL K + + P+L N M+LRKCC HP+LL G
Sbjct: 649 VLQKQYYRALYEKNLKFLHKNKKAIDGPSLNNLAMQLRKCCNHPFLLTG 697
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 82/156 (52%), Gaps = 24/156 (15%)
Query: 25 YKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQ 84
++N LR YQ EG++W++ + NGR+ ILADE MGLGKTIQ
Sbjct: 377 WENGGQLRDYQAEGVSWMISNHINGRSSILADE-------------------MGLGKTIQ 417
Query: 85 SLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVVLLQTGSKFF 143
+ T+V V KT RGPFL++APLST+P+W REF WT LN +VYH L ++
Sbjct: 418 TATYVATVSKTLKTRGPFLIVAPLSTLPHWYREFTGWTTLNTVVYHG----LADDRNRAR 473
Query: 144 RICLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREF 179
F D V G+ +L +WQ+++
Sbjct: 474 EDEFAFPSDRVDAVGMNQYYLQKVARQWRADWQKQW 509
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 150 FVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
+V V KT RGPFL++APLST+P+W REF WT LN +VYHG
Sbjct: 421 YVATVSKTLKTRGPFLIVAPLSTLPHWYREFTGWTTLNTVVYHG 464
>gi|281200598|gb|EFA74816.1| chromo domain-containing protein [Polysphondylium pallidum PN500]
Length = 2720
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 151/212 (71%), Gaps = 10/212 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+R+ L++YE + R DK+ Y F +++TT+E ++++ ++ WR+ ++DE HR
Sbjct: 906 ARSTLKKYE-WKRQDKS--------YMFEIMLTTYETVMTEHSDIVKVPWRIMVLDEGHR 956
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
+KN N K+L L+ + EH ++L+GTPLQN++ EL+++LNFL+ ++F++ F++EF L
Sbjct: 957 IKNVNSKVLTKLKSIRSEHTLILTGTPLQNDMKELWTMLNFLDSRKFNSCTEFLAEFSDL 1016
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
K ES+V +L LL P +LRR+KEDVE SI KEETV++VEL++ QK YYR ILE+N FL
Sbjct: 1017 KEESQVQRLHHLLSPYLLRRMKEDVELSIPIKEETVIQVELSSTQKTYYRAILEKNREFL 1076
Query: 478 SKGTTS-ANVPNLMNTMMELRKCCIHPYLLNG 508
++G S +N+P L N M+++RK C HP+L+ G
Sbjct: 1077 ARGVKSKSNLPKLTNIMIQIRKVCNHPFLILG 1108
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 22/129 (17%)
Query: 3 LIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
L+K+P K PP + + P + +L+ +Q+EG WL + W++ R+ +LADEMGLGK
Sbjct: 797 LVKRPSKMPPFDNQL----VPKFNESLSLKQFQVEGFLWLSYCWYHERSSLLADEMGLGK 852
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD 122
TIQ TI L ++ GI+GPF+V+APLST+ NW +E WT+
Sbjct: 853 TIQ----------------TIAFLQYISQTV--GIKGPFMVVAPLSTLGNWHKEIIKWTN 894
Query: 123 LNVIVYHAT 131
+ V+V++ T
Sbjct: 895 MRVLVFYGT 903
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 32/41 (78%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLS 198
GI+GPF+V+APLST+ NW +E WT++ V+V++G ++ S
Sbjct: 868 GIKGPFMVVAPLSTLGNWHKEIIKWTNMRVLVFYGTQEARS 908
>gi|357116837|ref|XP_003560183.1| PREDICTED: uncharacterized protein LOC100822490 [Brachypodium
distachyon]
Length = 2256
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 143/214 (66%), Gaps = 1/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ +R+++++YE ++ D NQ K K +KF+VL+TT+E+++ D L+ +W + I+DE
Sbjct: 745 SARARSIIRQYE-WYEGDANQIGKTKKSHKFNVLLTTYEMVLVDATYLRSVSWEVLIVDE 803
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
HRLKN + KL L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F +F
Sbjct: 804 GHRLKNSSSKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF 863
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L T +V +L+ L+ P MLRRLK+D K+I PK E +V VELT+IQ +YYR +L +N+
Sbjct: 864 NDLATAEKVEELKKLVAPHMLRRLKKDAMKNIPPKTERMVPVELTSIQAEYYRAMLTKNY 923
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +L+N +M+LRK C HPYL+ G
Sbjct: 924 QVLRNTGKGGAHQSLLNIVMQLRKVCNHPYLIPG 957
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 19/99 (19%)
Query: 34 YQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVF 93
+QLE LNWL W+ +N ILADEMGLGKT+ + C L+ + F
Sbjct: 665 HQLEALNWLRKCWYKSKNVILADEMGLGKTVSA----CAF------------LSSLCCEF 708
Query: 94 KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
K + P LV+ PLST+PNW EF +W LNV+ YH +
Sbjct: 709 KINL--PCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGS 745
>gi|219115952|ref|XP_002178771.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409538|gb|EEC49469.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 531
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 142/218 (65%), Gaps = 12/218 (5%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R++L+EYE ++ + + + KF VL+TT++ +I D + +R+ ++DEAHRL
Sbjct: 188 RDVLREYEWYYEDRPHT----AEFLKFDVLVTTYDTLIGDFDVISQIPFRVAVVDEAHRL 243
Query: 359 KNRNCKLLEGLRLLH--------LEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAF 410
+N+ +LLE +R + + RVL+SGTPLQN++ EL++LLNF+EP +F + + F
Sbjct: 244 RNQKGRLLECMREISAKGTMQYGFQSRVLMSGTPLQNDLTELWTLLNFIEPFKFPDLDNF 303
Query: 411 MSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGIL 470
FG + +V LQ ++ P MLRR+KEDV K I KEETV++VELT+IQK+YYR I
Sbjct: 304 QLNFGNMANREQVESLQQMISPYMLRRVKEDVAKDIPAKEETVIDVELTSIQKQYYRAIF 363
Query: 471 ERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
E N +FL+ G T P LMN MELRK C HP+LL G
Sbjct: 364 EHNHAFLNIGATRNTAPKLMNIQMELRKVCNHPFLLEG 401
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 20/106 (18%)
Query: 25 YKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQ 84
YKN N LR YQ+EG+NWL +W+ + CILADEM GLGKT+Q
Sbjct: 95 YKNGNRLRDYQVEGVNWLASTWYKKQGCILADEM-------------------GLGKTVQ 135
Query: 85 SLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
+ +++ +F+ + PFLV+ PLST+ +W+REFE WTD+ +YH
Sbjct: 136 IVCYIEHIFRVEKVHRPFLVVVPLSTVEHWRREFEGWTDMICCIYH 181
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 150 FVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRK 195
+++ +F+ + PFLV+ PLST+ +W+REFE WTD+ +YH R++
Sbjct: 139 YIEHIFRVEKVHRPFLVVVPLSTVEHWRREFEGWTDMICCIYHDRQR 185
>gi|145491053|ref|XP_001431526.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398631|emb|CAK64128.1| unnamed protein product [Paramecium tetraurelia]
Length = 1668
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 152/219 (69%), Gaps = 5/219 (2%)
Query: 293 KSASASRNMLQEYELFFRND--KNQFIKEKDLYKFHVLITTFEIIISDCLEL-KDFNWRL 349
+ +SA R + ++YE F+ + K ++ ++YKF +LIT++E+ + D + + ++
Sbjct: 630 QESSAGRALCRQYEFFYTDISMKGIVLQASEIYKFQILITSYEVFMQDFQAIFINIPFQY 689
Query: 350 CIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEA 409
++DEAH+LKN N ++L+ L+ L + +LL+GTP+QNN ELFSLLNF+EP QFSN +
Sbjct: 690 IVVDEAHKLKNSNARILQSLKKLCCQRTLLLTGTPIQNNTEELFSLLNFIEPYQFSNLIS 749
Query: 410 FMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGI 469
F E+GQL+T +V KL +LLKP +LRR KEDVE+ I P +ET++++E+T IQK Y+ +
Sbjct: 750 FKREYGQLETSDQVEKLNVLLKPYILRRQKEDVEQMIPPLQETIIDIEMTTIQKHIYKAL 809
Query: 470 LERNFSFLSKGTT--SANVPNLMNTMMELRKCCIHPYLL 506
ERN S L +G + +AN +L N ++LRKCC HP+L+
Sbjct: 810 YERNKSMLEQGFSQWAANAASLNNLEIQLRKCCNHPFLI 848
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 88/155 (56%), Gaps = 30/155 (19%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
++KPP ++ +L ++ +YK+ LR YQL+ LNWL+ +W+ RN ILADEMGL
Sbjct: 527 QRKPP-HEYTQLTQT-IYKDRRLLRDYQLDSLNWLIRAWYEDRNVILADEMGL------- 577
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFK-TGIRGPFLVIAPLSTIPNWQREFEAWTDLNVI 126
GKTIQ++ F++ ++ RGPFL+IAPLST+ +W+R E WT+LN +
Sbjct: 578 ------------GKTIQTIAFLNHLYNFENYRGPFLIIAPLSTLQHWKRTVEEWTNLNAV 625
Query: 127 VYHATFVVLLQTGSKFFRIC--LEFFVDAVFKTGI 159
+Y+ Q S +C EFF + GI
Sbjct: 626 LYYD------QESSAGRALCRQYEFFYTDISMKGI 654
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 160 RGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSR 199
RGPFL+IAPLST+ +W+R E WT+LN ++Y+ + R
Sbjct: 597 RGPFLIIAPLSTLQHWKRTVEEWTNLNAVLYYDQESSAGR 636
>gi|428164865|gb|EKX33876.1| hypothetical protein GUITHDRAFT_45412, partial [Guillardia theta
CCMP2712]
Length = 754
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 103/225 (45%), Positives = 145/225 (64%), Gaps = 16/225 (7%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLE---LKDFNWRLCIIDE 354
SR+++ +YE +F +D+++ + E+ KF+VLITT+E+++ D L D W I+DE
Sbjct: 254 SRDIIFKYEFYFLDDEHRKVSEE--LKFNVLITTWEVVMKDEENGGILADIMWDCVIVDE 311
Query: 355 AHRLKNRNCKLLEGLRLL----------HLEHRVLLSGTPLQNNVNELFSLLNFLEPQQF 404
AHRLKN++ K L+ H VL++GTPLQNN EL+ LL+FL P F
Sbjct: 312 AHRLKNKSSKTFTSLKSFKAVPPCSNPDDAAHCVLMTGTPLQNNTEELWCLLHFLSPNNF 371
Query: 405 SNNEAFMSEFGQL-KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQK 463
N E F+ +G +T ++ +L+ L+P MLRR KEDVEKSI PKEE +VEVE++ +Q+
Sbjct: 372 DNLELFLDRYGNPPETAGQIVELRKALQPFMLRRHKEDVEKSIPPKEEIIVEVEMSQLQR 431
Query: 464 KYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
Y+ ILE+NF +L KG A VP L N MELRKCC HPYL++G
Sbjct: 432 TTYKSILEKNFDWLRKGAKGAQVPALRNVEMELRKCCNHPYLIDG 476
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 76/131 (58%), Gaps = 25/131 (19%)
Query: 6 KPKKKPPASDWVKLEKSPVYKND-----NTLRAYQLEGLNWLMFSWFNGRNCILADEMGL 60
K +K+PP + E Y + N+LR YQ EG+NWL+F+W
Sbjct: 139 KREKRPPVERISQSEDIEDYVKECFFKGNSLREYQREGVNWLIFNWLQ------------ 186
Query: 61 GKTIQSLTRNCILADEMGLGKTIQSLTFVDAV-FKTGIRGPFLVIAPLSTIPNWQREFEA 119
R ILADEMGLGKT+Q++ F+ + K G RGPFLV+APLSTIP+W RE EA
Sbjct: 187 -------RRGSILADEMGLGKTVQAVGFMSWLNQKQGRRGPFLVVAPLSTIPHWLREVEA 239
Query: 120 WTDLNVIVYHA 130
WTDLN IV+H
Sbjct: 240 WTDLNAIVFHG 250
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 32/37 (86%)
Query: 156 KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
K G RGPFLV+APLSTIP+W RE EAWTDLN IV+HG
Sbjct: 214 KQGRRGPFLVVAPLSTIPHWLREVEAWTDLNAIVFHG 250
>gi|123434210|ref|XP_001308765.1| SNF2 family N-terminal domain containing protein [Trichomonas
vaginalis G3]
gi|121890461|gb|EAX95835.1| SNF2 family N-terminal domain containing protein [Trichomonas
vaginalis G3]
Length = 1454
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 142/211 (67%), Gaps = 9/211 (4%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELK-DFNWRLCIIDEAHR 357
R+ML++Y + ++ + + KF VL+TTFE I+ + K DF+WR IIDEAHR
Sbjct: 292 RDMLKKYLITYQGTR--------IPKFDVLLTTFEYIMREVRTFKADFHWRCLIIDEAHR 343
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + K+ + + + +VLL+GTPLQNN EL++LLNFL+ ++F+++ F +FG+L
Sbjct: 344 LKNFDSKITHTMNNYNADFKVLLTGTPLQNNTKELWTLLNFLDTERFADHHIFDEKFGKL 403
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ ++ +LQ +LKP+MLRRLK DVEK+I P +E ++E +T QK YY+ I +N +L
Sbjct: 404 QDAEQIKELQAILKPLMLRRLKGDVEKNIIPMDEVIIECGMTPHQKGYYQSIYTKNMDYL 463
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
S+G N NLM+ MELRKCC HPYL+ G
Sbjct: 464 SRGAHKQNCSNLMSICMELRKCCNHPYLIKG 494
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 74/120 (61%), Gaps = 18/120 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
KKP S++ ++K K+ +LR YQL+G+N+L+ SW+N +N ILADEMGLGKT Q+
Sbjct: 184 KKPDPSEFRTIKKPDKSKSGKSLREYQLQGVNFLVNSWYNNKNPILADEMGLGKTCQASY 243
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
+LA ++ L GP+L++APLSTIP+W+RE WTDL V+ +
Sbjct: 244 FIKVLATQVKLP------------------GPYLILAPLSTIPHWERELHDWTDLKVLTF 285
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 144 RICLEFFVDAVFKTGIR--GPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRD 201
+ C + V T ++ GP+L++APLSTIP+W+RE WTDL V+ + G ++ RRD
Sbjct: 237 KTCQASYFIKVLATQVKLPGPYLILAPLSTIPHWERELHDWTDLKVLTFLGSKE---RRD 293
Query: 202 KERLRLKYVAADYVPK 217
+ L +PK
Sbjct: 294 MLKKYLITYQGTRIPK 309
>gi|298715287|emb|CBJ27936.1| Chromodomain-helicase-DNA-binding protein 8 [Ectocarpus siliculosus]
Length = 3661
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 143/222 (64%), Gaps = 18/222 (8%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R++++EYE ++ + K + KFHVL+TT++ +ISD L WR ++DEAHR+
Sbjct: 2064 RDLIREYEWYYSG------RSKRVLKFHVLVTTYDDVISDAEMLAQVPWRAVVVDEAHRM 2117
Query: 359 KNRNCKLL--------EGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAF 410
+N+N LL G+ + +HRVL++GTP+QN EL+ L+NF++ F + + F
Sbjct: 2118 RNKNSALLGCLQQVVHNGMAVNAYQHRVLMTGTPMQNIKEELWPLMNFIDQSNFPDLQRF 2177
Query: 411 MSEFGQLKTESEVNKLQLL---LKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYR 467
++ + + EV++ + L LKP MLRR KEDV K I PKEET+++VELT +QKKYYR
Sbjct: 2178 QEKYCKGEPGHEVDEARALRRRLKPYMLRRRKEDVTKDIPPKEETIIDVELTMVQKKYYR 2237
Query: 468 GILERNFSFLSK-GTTSANVPNLMNTMMELRKCCIHPYLLNG 508
I ERN S L+K G + P+LMN MELRKCC HP+++ G
Sbjct: 2238 AIYERNHSVLNKVGAGAGKAPSLMNIQMELRKCCNHPFMVRG 2279
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 20/111 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
K P +KN N LR YQ G+NW++ W + R CILADEMGLG
Sbjct: 1964 KVPDFKNTNELRDYQRRGVNWMLSCW------------------KKKKRGCILADEMGLG 2005
Query: 81 KTIQSLTFVDAVFKTGIR--GPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
KT+Q + ++ VF R GPFLV+ PL+TI +W+RE EAWTD+N+ +YH
Sbjct: 2006 KTVQVVAMLNYVFSNSERERGPFLVVVPLTTIEHWRREVEAWTDMNLCMYH 2056
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 28/32 (87%)
Query: 160 RGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 191
RGPFLV+ PL+TI +W+RE EAWTD+N+ +YH
Sbjct: 2025 RGPFLVVVPLTTIEHWRREVEAWTDMNLCMYH 2056
>gi|145522682|ref|XP_001447185.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414685|emb|CAK79788.1| unnamed protein product [Paramecium tetraurelia]
Length = 1508
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 150/219 (68%), Gaps = 5/219 (2%)
Query: 293 KSASASRNMLQEYELFFRND--KNQFIKEKDLYKFHVLITTFEIIISDCLEL-KDFNWRL 349
+ ++A R ++YE F+ + K ++ ++YKF +LIT++E+ + D + + ++
Sbjct: 489 QESTAGRTQCRQYEFFYTDISMKGIVLQASEIYKFQILITSYEVFMQDFQTIFINIPFQY 548
Query: 350 CIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEA 409
++DEAH+LKN N ++L+ L+ L + +LL+GTP+QNN ELFSLLNF+EP FSN +
Sbjct: 549 IVVDEAHKLKNSNARILQSLKKLCCQRTLLLTGTPIQNNTEELFSLLNFIEPYSFSNLTS 608
Query: 410 FMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGI 469
F E+GQL+T +V KL +LLKP +LRR KEDVE+ I P +ET++++E+T IQK Y+ +
Sbjct: 609 FKREYGQLETSDQVEKLNVLLKPFILRRQKEDVEQMIPPLQETIIDIEMTTIQKHIYKAL 668
Query: 470 LERNFSFLSKGTT--SANVPNLMNTMMELRKCCIHPYLL 506
ERN S L +G + +AN +L N ++LRKCC HPYL+
Sbjct: 669 YERNKSMLEQGFSQWAANAASLNNLEIQLRKCCNHPYLI 707
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 89/153 (58%), Gaps = 26/153 (16%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
++KPP ++ +L ++ +YK+ LR YQL+ LNWL+ +W+ RN ILADEMGL
Sbjct: 386 QRKPP-HEYTQLTQT-IYKDRRLLRDYQLDSLNWLIRAWYEDRNVILADEMGL------- 436
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFK-TGIRGPFLVIAPLSTIPNWQREFEAWTDLNVI 126
GKTIQ+++F++ ++ RGPFL+IAPLST+ +W+R E WT+LN +
Sbjct: 437 ------------GKTIQTISFLNHLYNFENYRGPFLIIAPLSTLQHWKRTVEEWTNLNAV 484
Query: 127 VYHATFVVLLQTGSKFFRICLEFFVDAVFKTGI 159
+Y+ +T + + EFF + GI
Sbjct: 485 LYYDQESTAGRTQCRQY----EFFYTDISMKGI 513
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 160 RGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSR 199
RGPFL+IAPLST+ +W+R E WT+LN ++Y+ + R
Sbjct: 456 RGPFLIIAPLSTLQHWKRTVEEWTNLNAVLYYDQESTAGR 495
>gi|242045708|ref|XP_002460725.1| hypothetical protein SORBIDRAFT_02g033850 [Sorghum bicolor]
gi|241924102|gb|EER97246.1| hypothetical protein SORBIDRAFT_02g033850 [Sorghum bicolor]
Length = 614
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 143/214 (66%), Gaps = 1/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ SR+++++YE + D +Q K K YKF+VL+TT+E+++ D L+ +W + I+DE
Sbjct: 57 SARSRSIIRQYE-WHAGDASQIGKTKRSYKFNVLLTTYEMVLVDAAYLRSVSWEVLIVDE 115
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
HRLKN + KL L L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F +F
Sbjct: 116 GHRLKNSSSKLFSLLNSLSFQHRVLLTGTPLQNNIGEMYNLLNFLQPTSFPSLSSFEEKF 175
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L T +V +L+ L+ P MLRRLK+D ++I PK E +V VELT+IQ +YYR +L +N+
Sbjct: 176 NDLTTAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNY 235
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +L+N +M+LRK C HPYL+ G
Sbjct: 236 QVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPG 269
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
Query: 77 MGLGKTIQSLTFVDAV---FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
MGLGKT+ + F+ ++ FK + P LV+ PLST+PNW EF +W LNV+ YH +
Sbjct: 1 MGLGKTVSACAFLSSLCCEFKISL--PCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGS 57
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 9/55 (16%)
Query: 145 ICLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
+C EF I P LV+ PLST+PNW EF +W LNV+ YHG + S
Sbjct: 16 LCCEF--------KISLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARSRS 62
>gi|300123117|emb|CBK24124.2| unnamed protein product [Blastocystis hominis]
Length = 1117
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 145/211 (68%), Gaps = 7/211 (3%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR ++ YE ++ +N + YKF+VL+TT+ I++SD L+D +W+ IIDEA R
Sbjct: 167 SRERIRAYEFYYPGYENSGV-----YKFNVLLTTYNILMSDLEVLQDIHWKYLIIDEAQR 221
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
K+++ KL L+ + + ++LL+GTPLQNN++EL+SLLNF+EP FS+ F++ +G L
Sbjct: 222 AKSQSTKLFSALKQIRADAKLLLTGTPLQNNMSELWSLLNFIEPTTFSSEMDFINRYGNL 281
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
++V L LL+P LRR+K DVEK+I PK ETV++VELT +QKKYYR I +RN ++L
Sbjct: 282 TYANQVASLHQLLRPYFLRRVKSDVEKNIPPKTETVIDVELTMLQKKYYRAIYDRNRAYL 341
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+S + L++ + ELRKCC HP+++ G
Sbjct: 342 EYEGSS--MAQLVSIVTELRKCCNHPFMIRG 370
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 80/131 (61%), Gaps = 22/131 (16%)
Query: 4 IKKPK----KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMG 59
++KP K+PP + + + S KN LR YQ+EG+NWL+FSW+ RNCILADEMG
Sbjct: 48 LRKPDMCRDKRPPPESYRQYKDSMPLKNGVVLREYQIEGVNWLIFSWYQRRNCILADEMG 107
Query: 60 LGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEA 119
LGKT+QS+ + V+ IRGPFLV+APLST+ +W+RE E
Sbjct: 108 LGKTLQSIA-------------LLNHFYTVEH-----IRGPFLVLAPLSTLGHWKREIEN 149
Query: 120 WTDLNVIVYHA 130
TDLNV+ YH+
Sbjct: 150 STDLNVVFYHS 160
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKER 204
IRGPFLV+APLST+ +W+RE E TDLNV+ YH + R++ R
Sbjct: 127 IRGPFLVLAPLSTLGHWKREIENSTDLNVVFYHSPHGGIESRERIR 172
>gi|414886764|tpg|DAA62778.1| TPA: putative homeodomain-like transcription factor superfamily
protein [Zea mays]
Length = 2379
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 142/214 (66%), Gaps = 1/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ SR+++++YE + D +Q K K YKF+VL+TT+E+++ D L+ +W + I+DE
Sbjct: 930 SARSRSIIRQYE-WHAGDASQIGKTKRSYKFNVLLTTYEMVLVDAAYLRSVSWEVLIVDE 988
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
HRLKN + KL L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F +F
Sbjct: 989 GHRLKNSSSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPTSFPSLSSFEEKF 1048
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L T +V +L+ L+ P MLRRLK+D ++I PK E +V VELT+IQ +YYR +L +N+
Sbjct: 1049 NDLTTAEKVEELKKLVAPHMLRRLKKDAMQNIPPKIERMVPVELTSIQAEYYRAMLTKNY 1108
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +L+N +M+LRK C HPYL+ G
Sbjct: 1109 QVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPG 1142
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 19/99 (19%)
Query: 34 YQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVF 93
+QLE LNWL W+ +N ILADEMGLGKT+ + C L+ + F
Sbjct: 850 HQLEALNWLRKCWYKSKNVILADEMGLGKTVSA----CAF------------LSSLYCEF 893
Query: 94 KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
K + P LV+ PLST+PNW EF +W LNV+ YH +
Sbjct: 894 KINL--PCLVLVPLSTMPNWMAEFSSWAPHLNVVEYHGS 930
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 162 PFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
P LV+ PLST+PNW EF +W LNV+ YHG + S
Sbjct: 898 PCLVLVPLSTMPNWMAEFSSWAPHLNVVEYHGSARSRS 935
>gi|414886765|tpg|DAA62779.1| TPA: putative homeodomain-like transcription factor superfamily
protein [Zea mays]
Length = 2186
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 142/214 (66%), Gaps = 1/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ SR+++++YE + D +Q K K YKF+VL+TT+E+++ D L+ +W + I+DE
Sbjct: 732 SARSRSIIRQYE-WHAGDASQIGKTKRSYKFNVLLTTYEMVLVDAAYLRSVSWEVLIVDE 790
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
HRLKN + KL L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F +F
Sbjct: 791 GHRLKNSSSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPTSFPSLSSFEEKF 850
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L T +V +L+ L+ P MLRRLK+D ++I PK E +V VELT+IQ +YYR +L +N+
Sbjct: 851 NDLTTAEKVEELKKLVAPHMLRRLKKDAMQNIPPKIERMVPVELTSIQAEYYRAMLTKNY 910
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +L+N +M+LRK C HPYL+ G
Sbjct: 911 QVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPG 944
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 19/99 (19%)
Query: 34 YQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVF 93
+QLE LNWL W+ +N ILADEMGLGKT+ + C L+ + F
Sbjct: 652 HQLEALNWLRKCWYKSKNVILADEMGLGKTVSA----CAF------------LSSLYCEF 695
Query: 94 KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
K + P LV+ PLST+PNW EF +W LNV+ YH +
Sbjct: 696 KINL--PCLVLVPLSTMPNWMAEFSSWAPHLNVVEYHGS 732
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 162 PFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
P LV+ PLST+PNW EF +W LNV+ YHG + S
Sbjct: 700 PCLVLVPLSTMPNWMAEFSSWAPHLNVVEYHGSARSRS 737
>gi|390367174|ref|XP_003731194.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like
[Strongylocentrotus purpuratus]
Length = 2202
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 136/215 (63%), Gaps = 6/215 (2%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F +D K +++ L KFHVL+T++E+I D L+ NW + +
Sbjct: 858 SRAIIRENEFSFEDDAVKGGKKAYKMRQGSLVKFHVLLTSYELISIDAGTLQSVNWDVLV 917
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN + L ++ R+LL+GTPLQNN+ ELF LLNF+ P +F+N + F+
Sbjct: 918 VDEAHRLKNNQSRFFRILSGYNIRFRLLLTGTPLQNNLEELFHLLNFMSPDEFNNLQHFL 977
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
+EF + E ++ KL +L P MLRRLK DV K + K E +V VEL+ +QKKYY+ IL
Sbjct: 978 AEFADISKEDQIKKLHDMLGPHMLRRLKADVLKGMPSKSEFIVRVELSPLQKKYYKYILT 1037
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ +L+N MM+L+KCC HPYL
Sbjct: 1038 RNFQALNTKAAGGGSVSLLNIMMDLKKCCNHPYLF 1072
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 76/151 (50%), Gaps = 34/151 (22%)
Query: 18 KLEKSPVYKN--DNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
K E P Y + L YQLEGLNWL +SW N ILADEMG
Sbjct: 757 KFEVQPQYIDACGGKLHDYQLEGLNWLRYSWHNDICTILADEMG---------------- 800
Query: 76 EMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVV 134
LGKTIQ++ F+ +++K G +GPFL+ APLSTI NW+REFE W F V
Sbjct: 801 ---LGKTIQTIAFLYSLYKEGHSKGPFLISAPLSTIINWEREFEFWA--------PDFYV 849
Query: 135 LLQTGSKFFRICL---EF-FVDAVFKTGIRG 161
+ TG K R + EF F D K G +
Sbjct: 850 VTYTGDKDSRAIIRENEFSFEDDAVKGGKKA 880
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFL+ APLSTI NW+REFE W D V+ Y G +
Sbjct: 810 FLYSLYKEGHSKGPFLISAPLSTIINWEREFEFWAPDFYVVTYTGDK 856
>gi|218199663|gb|EEC82090.1| hypothetical protein OsI_26092 [Oryza sativa Indica Group]
Length = 2275
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 143/214 (66%), Gaps = 1/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ +R+++++YE + D +Q K K +KF+VL+TT+E+++ D L+ +W + I+DE
Sbjct: 773 SARARSIIRQYE-WHEGDASQMGKIKKSHKFNVLLTTYEMVLVDAAYLRSVSWEVLIVDE 831
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
HRLKN + KL L L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F +F
Sbjct: 832 GHRLKNSSSKLFSLLNTLSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF 891
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L T +V +L+ L+ P MLRRLK+D ++I PK E +V VELT+IQ +YYR +L +N+
Sbjct: 892 NDLTTTEKVEELKNLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNY 951
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +L+N +M+LRK C HPYL+ G
Sbjct: 952 QVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPG 985
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 19/99 (19%)
Query: 34 YQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVF 93
+QLE LNWL W+ +N ILADEMGLGKT+ + C L+ + +
Sbjct: 693 HQLEALNWLRKCWYKSKNVILADEMGLGKTVSA----CAF------------LSSLCCEY 736
Query: 94 KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
K + P LV+ PLST+PNW EF +W LNV+ YH +
Sbjct: 737 KINL--PCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGS 773
>gi|168042528|ref|XP_001773740.1| SNF2 family chromodomain-helicase [Physcomitrella patens subsp.
patens]
gi|162674996|gb|EDQ61497.1| SNF2 family chromodomain-helicase [Physcomitrella patens subsp.
patens]
Length = 1791
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 147/213 (69%), Gaps = 10/213 (4%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R+++++YE F ++ KF+VL+T+FE+++ D +L W+ I+DEAHRL
Sbjct: 811 RDIIRQYEFNFASNSKAL-------KFNVLLTSFEMLMRDQNKLAKETWQYIIVDEAHRL 863
Query: 359 KNRNCKLLEGLRLLHLEHR--VLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
K+R K + LR L + +LL+GTP+QNN E+FSLLN L+P++F++ E F+ ++G+
Sbjct: 864 KSRVSKTTQALRQLKVRKGGLLLLTGTPVQNNTKEIFSLLNLLDPEKFNSEEDFLEKYGE 923
Query: 417 LKTESEVNKLQL-LLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
++ ++ LQ +L+P +LRR+KEDVEKSI KEET+V VELT Q+ +Y+ ILE N +
Sbjct: 924 IEDAEQIKDLQENILRPRLLRRMKEDVEKSIPQKEETIVWVELTKDQRLFYKAILENNVA 983
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L KG++++N+PNL N MELRK C HP+L +G
Sbjct: 984 SLLKGSSTSNLPNLRNVAMELRKVCNHPFLCDG 1016
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 65/107 (60%), Gaps = 18/107 (16%)
Query: 25 YKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQ 84
+++ LR YQ EG+ WL ++ N NC+LADEMGLGKTIQS+ ++
Sbjct: 719 FRDGRVLRNYQEEGVTWLDHNFENRTNCVLADEMGLGKTIQSVA-------------MLE 765
Query: 85 SLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHAT 131
+L K +RGPFLVI P+ST+ +WQRE E+ TD+N IVY T
Sbjct: 766 TLR-----CKRNLRGPFLVIVPVSTLGHWQREIESLTDMNCIVYSGT 807
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 156 KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
K +RGPFLVI P+ST+ +WQRE E+ TD+N IVY G
Sbjct: 770 KRNLRGPFLVIVPVSTLGHWQREIESLTDMNCIVYSG 806
>gi|222637088|gb|EEE67220.1| hypothetical protein OsJ_24338 [Oryza sativa Japonica Group]
Length = 2258
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 143/214 (66%), Gaps = 1/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ +R+++++YE + D +Q K K +KF+VL+TT+E+++ D L+ +W + I+DE
Sbjct: 756 SARARSIIRQYE-WHEGDASQMGKIKKSHKFNVLLTTYEMVLVDAAYLRSVSWEVLIVDE 814
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
HRLKN + KL L L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F +F
Sbjct: 815 GHRLKNSSSKLFSLLNTLSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF 874
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L T +V +L+ L+ P MLRRLK+D ++I PK E +V VELT+IQ +YYR +L +N+
Sbjct: 875 NDLTTTEKVEELKNLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNY 934
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +L+N +M+LRK C HPYL+ G
Sbjct: 935 QVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPG 968
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 19/99 (19%)
Query: 34 YQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVF 93
+QLE LNWL W+ +N ILADEMGLGKT+ + C L+ + +
Sbjct: 676 HQLEALNWLRKCWYKSKNVILADEMGLGKTVSA----CAF------------LSSLCCEY 719
Query: 94 KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
K + P LV+ PLST+PNW EF +W LNV+ YH +
Sbjct: 720 KINL--PCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGS 756
>gi|145512399|ref|XP_001442116.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409388|emb|CAK74719.1| unnamed protein product [Paramecium tetraurelia]
Length = 1659
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 150/219 (68%), Gaps = 5/219 (2%)
Query: 293 KSASASRNMLQEYELFFRND--KNQFIKEKDLYKFHVLITTFEIIISDCLEL-KDFNWRL 349
+ ++A R + ++YE F+ + K + ++YKF +LIT++E+ + D + + ++
Sbjct: 630 QESNAGRQLCRQYEFFYTDISMKGILLTASEIYKFQILITSYEVFMQDFQNIFINIPFQY 689
Query: 350 CIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEA 409
++DEAH+LKN N ++L+ L+ L + +LL+GTP+QNN ELFSLLNF+EP QF N
Sbjct: 690 IVVDEAHKLKNSNARILQSLKRLSCQRTLLLTGTPIQNNTEELFSLLNFIEPNQFCNLNY 749
Query: 410 FMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGI 469
F ++GQL+T +V++L +LLKP +LRR KEDVE+ I P +ET++++E+T +QK Y+ +
Sbjct: 750 FKRDYGQLETSDQVDRLNVLLKPYILRRQKEDVEQMIPPLQETIIDIEMTTVQKHIYKAL 809
Query: 470 LERNFSFLSKGTT--SANVPNLMNTMMELRKCCIHPYLL 506
+RN S L +G + +AN +L N ++LRKCC HP+L+
Sbjct: 810 YDRNKSMLEQGFSQWAANAASLNNLEIQLRKCCNHPFLI 848
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 89/155 (57%), Gaps = 30/155 (19%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
++KPP ++ +L ++ +YK+ LR YQL+ LNWL+ +W+ RN ILADEMGL
Sbjct: 527 QQKPP-HEYTQLTQT-IYKDKRLLRDYQLDSLNWLIRAWYEDRNVILADEMGL------- 577
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFK-TGIRGPFLVIAPLSTIPNWQREFEAWTDLNVI 126
GKTIQ++ F++ ++ RGPFLVIAPLST+ +W+R E WT+LN +
Sbjct: 578 ------------GKTIQTIAFLNHLYNFENYRGPFLVIAPLSTLQHWKRTVEEWTNLNAV 625
Query: 127 VYHATFVVLLQTGSKFFRIC--LEFFVDAVFKTGI 159
+Y+ Q + ++C EFF + GI
Sbjct: 626 LYYD------QESNAGRQLCRQYEFFYTDISMKGI 654
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 160 RGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
RGPFLVIAPLST+ +W+R E WT+LN ++Y+ + R+
Sbjct: 597 RGPFLVIAPLSTLQHWKRTVEEWTNLNAVLYYDQESNAGRQ 637
>gi|115472213|ref|NP_001059705.1| Os07g0497000 [Oryza sativa Japonica Group]
gi|113611241|dbj|BAF21619.1| Os07g0497000, partial [Oryza sativa Japonica Group]
Length = 622
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 143/214 (66%), Gaps = 1/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ +R+++++YE + D +Q K K +KF+VL+TT+E+++ D L+ +W + I+DE
Sbjct: 58 SARARSIIRQYE-WHEGDASQMGKIKKSHKFNVLLTTYEMVLVDAAYLRSVSWEVLIVDE 116
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
HRLKN + KL L L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F +F
Sbjct: 117 GHRLKNSSSKLFSLLNTLSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF 176
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L T +V +L+ L+ P MLRRLK+D ++I PK E +V VELT+IQ +YYR +L +N+
Sbjct: 177 NDLTTTEKVEELKNLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNY 236
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +L+N +M+LRK C HPYL+ G
Sbjct: 237 QVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPG 270
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 76 EMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
EMGLGKT+ + F+ ++ + I P LV+ PLST+PNW EF +W LNV+ YH +
Sbjct: 1 EMGLGKTVSACAFLSSLCCEYKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGS 58
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
I P LV+ PLST+PNW EF +W LNV+ YHG + S
Sbjct: 23 INLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSARARS 63
>gi|145341798|ref|XP_001415990.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576213|gb|ABO94282.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 663
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 133/213 (62%), Gaps = 3/213 (1%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
A R +E++ + D+ Q I +K ++++TT+E I +D W ++DEAH
Sbjct: 275 AGREFAREHDWYHPVDETQSISRA--FKANIVLTTYETITADRQSFAKAKWSTMVVDEAH 332
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLK KL L L +E LL+GTPLQNN EL+SLLNF++ + FSN E F FG
Sbjct: 333 RLKRVGGKLGNDLNSLAVERICLLTGTPLQNNTTELWSLLNFVDSKHFSNAEEFEEAFGG 392
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
+ ++V +LQ +L P +LRRLK DVE+ + P+ ET+VE EL +QKK YR + ERNFSF
Sbjct: 393 MAKAAQVERLQKVLGPYLLRRLKRDVEQKLPPRSETLVECELAPLQKKCYRALFERNFSF 452
Query: 477 LSKGTTS-ANVPNLMNTMMELRKCCIHPYLLNG 508
L +G S + N N MME+RKCC HP+LL+G
Sbjct: 453 LRQGCDSRESFANFANIMMEVRKCCQHPFLLDG 485
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 26/146 (17%)
Query: 2 SLIKKPKKKPPASDWVKLEKSPV---YKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEM 58
+++ + A+ W + V Y + LR+YQ EG+ W+ F++ GR CILAD
Sbjct: 159 AIVDAETDEDVANAWSSYDADTVRDSYGESDELRSYQKEGVKWMAFNFRAGRGCILAD-- 216
Query: 59 GLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFE 118
EMGLGKT Q+L + + P LV+ PLSTI NW+RE +
Sbjct: 217 -----------------EMGLGKTAQALALIHHCLQVRPGLPALVVVPLSTIVNWEREAQ 259
Query: 119 AWTDLNVIVYHATFVVLLQTGSKFFR 144
W +V H V Q G +F R
Sbjct: 260 RWVPDAYVVTH----VGKQAGREFAR 281
>gi|327288760|ref|XP_003229093.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Anolis
carolinensis]
Length = 2059
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E+E F ++ K F +K + KFHVL+T++E++ D L W +
Sbjct: 880 SRSIIREHEFSFEDNAMKGGKKAFKMKREAQVKFHVLLTSYELVTIDQAALASIRWACLV 939
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 940 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 999
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 1000 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1059
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1060 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1093
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 82/166 (49%), Gaps = 38/166 (22%)
Query: 7 PKKKPPASDW----VKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGL 60
P + PP S VK + P + TL YQLEGLNWL FSW + ILADEMG
Sbjct: 764 PSEDPPNSPTNDPTVKYDSQPRFITSTGGTLHMYQLEGLNWLRFSWAQSTDTILADEMG- 822
Query: 61 GKTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEA 119
LGKTIQ++ F+ ++++ G +GPFLV APLSTI NW+REF+
Sbjct: 823 ------------------LGKTIQTIVFLYSLYREGHTKGPFLVSAPLSTIINWEREFQM 864
Query: 120 WTDLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTGIRG 161
W F V+ TG K R + EF F D K G +
Sbjct: 865 WA--------PNFYVVTYTGDKDSRSIIREHEFSFEDNAMKGGKKA 902
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ ++++ G +GPFLV APLSTI NW+REF+ W + V+ Y G + S
Sbjct: 832 FLYSLYREGHTKGPFLVSAPLSTIINWEREFQMWAPNFYVVTYTGDKDSRS 882
>gi|299115203|emb|CBN74034.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1524
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 144/220 (65%), Gaps = 10/220 (4%)
Query: 299 RNMLQEYELFFRNDKNQF------IKEKDLYKFHVLITTFEIIISDCLEL---KDFNWRL 349
R +L+ YE+ F DK + IK K ++K V+ITT E+ I ++ + W +
Sbjct: 496 REILEGYEMEFAGDKGRAEKDKTRIKGKRVWKSTVVITTPELCIRKDVKTLLQRRIAWDV 555
Query: 350 CIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEA 409
++DEAHRLKN +L L+ E +LL+GTPLQNN EL++LLN ++ +F + +
Sbjct: 556 LVVDEAHRLKNSASRLNVVLKDYTFESSLLLTGTPLQNNTEELWTLLNLVDEPKFRDQQG 615
Query: 410 FMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGI 469
F+ ++G L+ +V++LQ +KP +LRR+KE VEK++ PKEE ++EVELT IQK+YYR I
Sbjct: 616 FVEKYGDLQEAEDVSELQEAIKPYLLRRMKEGVEKAVPPKEEIIIEVELTEIQKQYYRAI 675
Query: 470 LERNFSFLSKGTTSA-NVPNLMNTMMELRKCCIHPYLLNG 508
+RN +FL +G A + P+LMN M+LRKCC HP+L+ G
Sbjct: 676 YDRNTTFLLQGKKQAKDAPSLMNLAMQLRKCCNHPFLITG 715
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 71/108 (65%), Gaps = 18/108 (16%)
Query: 23 PVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKT 82
PV+KN +LR YQ EG+ W++++W GR ILADEMGLGKT+Q T
Sbjct: 402 PVFKNGGSLRDYQREGVRWIIYNWLQGRGSILADEMGLGKTLQ----------------T 445
Query: 83 IQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
+ L+ + V+ G RGPFLVIAPLST+P+W REF+ W+D+N +V+H
Sbjct: 446 VAFLSILHNVY--GKRGPFLVIAPLSTVPHWLREFQTWSDMNAVVFHG 491
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 83 IQSLTFVDAVFKTGIRGPFLVIAPL-----STIPNWQREFEAWTDLNVIVYHATFVV-LL 136
++SL + A K P L P ++ ++QRE W N + + + +
Sbjct: 378 MKSLVSLKATRKVADGAPDLDKEPPVFKNGGSLRDYQREGVRWIIYNWLQGRGSILADEM 437
Query: 137 QTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
G + + V+ G RGPFLVIAPLST+P+W REF+ W+D+N +V+HG
Sbjct: 438 GLGKTLQTVAFLSILHNVY--GKRGPFLVIAPLSTVPHWLREFQTWSDMNAVVFHG 491
>gi|281343214|gb|EFB18798.1| hypothetical protein PANDA_010098 [Ailuropoda melanoleuca]
Length = 1318
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 139 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 198
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 199 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 258
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 259 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 318
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 319 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 352
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 27 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 81
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 82 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 125
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 126 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 158
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 91 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 137
>gi|299471324|emb|CBN79280.1| CHROMODOMAIN HELICASE DNA BINDING [Ectocarpus siliculosus]
Length = 2463
Score = 187 bits (476), Expect = 8e-45, Method: Composition-based stats.
Identities = 98/221 (44%), Positives = 143/221 (64%), Gaps = 11/221 (4%)
Query: 299 RNMLQEYELFFRNDKNQ------FIKEKDLYKFHVLITTFEIIIS---DCLELKDFNWRL 349
R +L+ YE+ F D + IK + L+K V++TT E+ I L + W
Sbjct: 906 REILENYEMEFSEDMEKKPKDKSTIKGRRLWKSTVVVTTPELCIRKEVSSLLGRKVRWDA 965
Query: 350 CIIDEAHRLKNRNCKLLEGLR-LLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNE 408
++DEAHRLK+ KL L+ + +LL+GTPLQNN EL++LLN ++ +F N +
Sbjct: 966 LVVDEAHRLKSSRSKLNVVLKESFTFDSTLLLTGTPLQNNTEELWTLLNLVDAPKFRNKD 1025
Query: 409 AFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRG 468
F+ ++G L+ +V++LQ +KP +LRR+KEDVEK++ PKEET++EVELT IQK+YYR
Sbjct: 1026 QFVEDYGDLQRAEDVSRLQENIKPYLLRRMKEDVEKAVPPKEETIIEVELTEIQKQYYRA 1085
Query: 469 ILERNFSFLSKGTTSA-NVPNLMNTMMELRKCCIHPYLLNG 508
I E+N +FL +G A + P+LMN M+LRKCC HPYL+ G
Sbjct: 1086 IYEQNTTFLLQGKKRAQDGPSLMNLAMQLRKCCNHPYLITG 1126
Score = 118 bits (296), Expect = 7e-24, Method: Composition-based stats.
Identities = 53/111 (47%), Positives = 73/111 (65%), Gaps = 18/111 (16%)
Query: 20 EKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGL 79
++ PV+KN +LR YQ EG+ W++++W GR ILADEMGLGKT+Q++T IL ++ G
Sbjct: 809 KEPPVFKNGGSLRDYQREGVRWMVYNWLQGRGSILADEMGLGKTLQTVTFLSILHNDYGK 868
Query: 80 GKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
RGPFLVIAPLST+ +WQREF+ W+D+N IV+H
Sbjct: 869 ------------------RGPFLVIAPLSTVTHWQREFQTWSDMNTIVFHG 901
Score = 66.2 bits (160), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
G RGPFLVIAPLST+ +WQREF+ W+D+N IV+HG
Sbjct: 867 GKRGPFLVIAPLSTVTHWQREFQTWSDMNTIVFHG 901
>gi|444722915|gb|ELW63587.1| Chromodomain-helicase-DNA-binding protein 3 [Tupaia chinensis]
Length = 2077
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 610 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 669
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 670 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 729
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 730 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 789
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 790 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 823
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 498 PPSSPTNDPTVKYETQPRFITATGGTLHLYQLEGLNWLRFSWAQGTDTILADEMG----- 552
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 553 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 596
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 597 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 629
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G
Sbjct: 562 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTG 606
>gi|301771598|ref|XP_002921219.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like,
partial [Ailuropoda melanoleuca]
Length = 1363
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 182 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 241
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 242 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 301
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 302 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 361
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 362 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 395
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 70 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 124
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 125 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 168
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 169 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 201
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 134 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 180
>gi|148667386|gb|EDK99802.1| mCG144495 [Mus musculus]
Length = 680
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 199 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 258
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 259 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 318
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 319 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 378
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 379 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 412
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 85 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 141
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 142 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 185
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 186 PDMYVVTY 193
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 151 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 197
>gi|109113159|ref|XP_001110923.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like isoform 1
[Macaca mulatta]
Length = 1947
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/237 (44%), Positives = 146/237 (61%), Gaps = 10/237 (4%)
Query: 277 DGKSFSPTMSSGTDGLKSASASRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLIT 330
D ++ T +G G + SR +++E E F ++ K F +K + KFHVL+T
Sbjct: 784 DSRTLKGTAWTGELG-RGKKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLT 842
Query: 331 TFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVN 390
++E+I D L W ++DEAHRLKN K L ++H++LL+GTPLQNN+
Sbjct: 843 SYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLE 902
Query: 391 ELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKE 450
ELF LLNFL P++F+N E F+ EF + E ++ KL LL P MLRRLK DV K++ K
Sbjct: 903 ELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKT 962
Query: 451 ETVVEVELTNIQKKYYRGILERNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
E +V VEL+ +QKKYY+ IL RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 963 ELIVRVELSPMQKKYYKYILTRNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1017
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMGLGKTI
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTI 769
Query: 65 QSL 67
Q++
Sbjct: 770 QTI 772
>gi|291405109|ref|XP_002719030.1| PREDICTED: chromodomain helicase DNA binding protein 3-like
[Oryctolagus cuniculus]
Length = 1910
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 817 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 876
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 877 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 936
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 937 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 996
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 997 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1030
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 705 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 759
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 760 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 803
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 804 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 836
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 769 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 815
>gi|395748521|ref|XP_002827042.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Pongo abelii]
Length = 1993
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 807 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 866
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 867 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 926
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 927 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 986
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 987 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1020
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 695 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 749
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 750 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 793
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 794 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 826
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 759 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 805
>gi|113678140|ref|NP_001038323.1| chromodomain helicase DNA binding protein 4 [Danio rerio]
Length = 1929
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F N+ K +K++ KFHVL+T++E+I D L +W +
Sbjct: 797 SRAVIRENEFSFENNAIRGGKKPSKMKKEASVKFHVLLTSYELITIDTAVLGSIDWACLV 856
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++FSN E F+
Sbjct: 857 VDEAHRLKNNQSKFFRILNNYPLQHKLLLTGTPLQNNLEELFHLLNFLTPERFSNLEGFL 916
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K + K E +V VEL+ +QKKYY+ IL
Sbjct: 917 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKFILT 976
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 977 RNFEALNT-RGGGNQVSLLNVVMDLKKCCNHPYLF 1010
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 74/132 (56%), Gaps = 23/132 (17%)
Query: 1 MSLIKKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEM 58
M + +P + P +K E+ P Y TL YQLEGLNWL FSW G + ILADEM
Sbjct: 679 MRKLDRPPENPVVDPTIKFERQPDYLDTTGGTLHPYQLEGLNWLRFSWAQGTDTILADEM 738
Query: 59 GLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREF 117
G LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REF
Sbjct: 739 G-------------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREF 779
Query: 118 EAWT-DLNVIVY 128
E W D+ V+ Y
Sbjct: 780 EMWAPDMYVVTY 791
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 749 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 795
>gi|410979901|ref|XP_003996319.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Felis catus]
Length = 2100
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 916 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 975
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 976 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 1035
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 1036 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1095
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1096 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1129
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 804 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 858
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 859 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 902
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 903 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 935
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHG 192
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G
Sbjct: 868 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTG 912
>gi|162318864|gb|AAI56473.1| Chromodomain helicase DNA binding protein 3 [synthetic construct]
Length = 2045
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 867 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 926
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 927 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 986
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 987 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1046
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1047 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1080
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 755 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 809
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 810 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 853
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 854 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 886
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G
Sbjct: 819 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTG 863
>gi|62530242|gb|AAX85378.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus
norvegicus]
Length = 1927
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 780 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 839
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 840 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 899
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 900 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 959
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 960 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 993
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 668 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 722
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 723 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 766
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 767 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 799
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 732 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 778
>gi|431894030|gb|ELK03836.1| Chromodomain-helicase-DNA-binding protein 3 [Pteropus alecto]
Length = 2007
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 828 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 887
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 888 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 947
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 948 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1007
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1008 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1041
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 716 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 770
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 771 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 814
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 815 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 847
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 780 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 826
>gi|109113157|ref|XP_001111066.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like isoform 2
[Macaca mulatta]
Length = 1981
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/237 (44%), Positives = 146/237 (61%), Gaps = 10/237 (4%)
Query: 277 DGKSFSPTMSSGTDGLKSASASRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLIT 330
D ++ T +G G + SR +++E E F ++ K F +K + KFHVL+T
Sbjct: 784 DSRTLKGTAWTGELG-RGKKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLT 842
Query: 331 TFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVN 390
++E+I D L W ++DEAHRLKN K L ++H++LL+GTPLQNN+
Sbjct: 843 SYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLE 902
Query: 391 ELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKE 450
ELF LLNFL P++F+N E F+ EF + E ++ KL LL P MLRRLK DV K++ K
Sbjct: 903 ELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKT 962
Query: 451 ETVVEVELTNIQKKYYRGILERNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
E +V VEL+ +QKKYY+ IL RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 963 ELIVRVELSPMQKKYYKYILTRNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1017
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMGLGKTI
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTI 769
Query: 65 QSL 67
Q++
Sbjct: 770 QTI 772
>gi|62530236|gb|AAX85375.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus
norvegicus]
gi|62530238|gb|AAX85376.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus
norvegicus]
Length = 1925
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 778 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 837
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 838 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 897
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 898 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 957
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 958 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 991
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 666 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 720
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 721 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 764
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 765 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 797
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 730 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 776
>gi|158420731|ref|NP_001005271.2| chromodomain-helicase-DNA-binding protein 3 isoform 3 [Homo sapiens]
Length = 2059
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 881 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 940
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 941 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 1000
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 1001 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1060
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1061 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1094
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 769 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 823
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 824 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 867
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 868 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 900
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G
Sbjct: 833 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTG 877
>gi|62530240|gb|AAX85377.1| chromodomain helicase DNA-binding protein 3 short isoform [Rattus
norvegicus]
Length = 1924
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 777 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 836
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 837 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 896
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 897 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 956
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 957 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 990
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 665 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 719
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 720 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 763
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 764 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 796
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 729 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 775
>gi|426238820|ref|XP_004013342.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Ovis aries]
Length = 2020
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 840 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 899
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 900 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 959
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 960 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1019
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1020 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1053
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 728 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 782
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 783 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 826
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 827 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 859
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHG 192
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G
Sbjct: 792 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTG 836
>gi|300121090|emb|CBK21472.2| unnamed protein product [Blastocystis hominis]
Length = 1183
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/219 (42%), Positives = 142/219 (64%), Gaps = 11/219 (5%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R++++ YE ++ + +YKF +L+TT+EI +D EL++ W L ++DEA R+
Sbjct: 234 RHLIERYEFYYTRKQLPVPPPFPVYKFDILLTTYEIANTDVDELRNIRWSLVVVDEAQRM 293
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK 418
KN++ KL + L +H + VLL+GTPLQNN+ EL++LLNF+ PQ F ++ F+ ++G L
Sbjct: 294 KNKSGKLQQTLHQIHWQQCVLLTGTPLQNNMLELWTLLNFVAPQTFPSSTEFLQQYGDLH 353
Query: 419 TESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF-- 476
+S+V LQ LL +LRRLKEDVE SI PKEET++++ELT QK +YR I + N F
Sbjct: 354 NQSQVASLQRLLVTYVLRRLKEDVEDSIPPKEETIIDIELTTKQKTFYRAIYDHNRDFFI 413
Query: 477 ---------LSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+S+ + ++ P L++ M+ RKCC HPY+L
Sbjct: 414 HGYIRSGNGVSRVSGNSRGPRLVSMEMQFRKCCNHPYML 452
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 63/105 (60%), Gaps = 18/105 (17%)
Query: 25 YKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQ 84
+K++ TLR YQ EG WL ++ G+N ILADEMGLGKTIQ ++ L + +
Sbjct: 139 FKDNKTLRPYQWEGFRWLKDNYNQGKNSILADEMGLGKTIQVIS----LMEHI------- 187
Query: 85 SLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
+ + P LVIAPLST+ W+RE E+WT LNV++YH
Sbjct: 188 -------IHNMETQQPILVIAPLSTLGFWRREIESWTTLNVVMYH 225
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 162 PFLVIAPLSTIPNWQREFEAWTDLNVIVYH 191
P LVIAPLST+ W+RE E+WT LNV++YH
Sbjct: 196 PILVIAPLSTLGFWRREIESWTTLNVVMYH 225
>gi|355568209|gb|EHH24490.1| hypothetical protein EGK_08151 [Macaca mulatta]
Length = 1931
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 752 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 811
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 812 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 871
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 872 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 931
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 932 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 965
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 640 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 694
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 695 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 738
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 739 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 771
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 704 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 750
>gi|358417347|ref|XP_003583617.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Bos taurus]
Length = 2012
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 833 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 892
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 893 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 952
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 953 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1012
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1013 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1046
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 721 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 775
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 776 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 819
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 820 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 852
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 785 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 831
>gi|334328751|ref|XP_003341117.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like
[Monodelphis domestica]
Length = 1730
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 759 SRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAILGSIEWACLV 818
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 819 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 878
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 879 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 938
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 939 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 972
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 82/159 (51%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P + P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 647 PPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG----- 701
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKT+Q++ ++ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 702 --------------LGKTVQTIVYLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA-- 745
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 746 ------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 778
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
++ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 711 YLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 761
>gi|351701586|gb|EHB04505.1| Chromodomain-helicase-DNA-binding protein 3 [Heterocephalus glaber]
Length = 1774
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 837 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 896
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 897 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 956
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 957 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1016
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1017 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1050
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 725 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 779
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 780 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 823
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 824 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 856
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 789 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 835
>gi|149053041|gb|EDM04858.1| chromodomain helicase DNA binding protein 3 [Rattus norvegicus]
Length = 1827
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 645 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 704
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 705 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 764
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 765 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 824
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 825 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 858
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 533 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 587
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 588 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 631
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 632 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 664
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G
Sbjct: 597 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTG 641
>gi|311268329|ref|XP_003132000.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2 [Sus
scrofa]
Length = 2002
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>gi|432105627|gb|ELK31821.1| Chromodomain-helicase-DNA-binding protein 3 [Myotis davidii]
Length = 1998
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 820 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 879
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 880 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 939
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 940 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 999
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1000 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1033
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 708 PPNSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 762
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 763 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 806
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 807 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 839
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 772 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 818
>gi|402898652|ref|XP_003912334.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2
[Papio anubis]
Length = 1966
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>gi|392332091|ref|XP_001079343.3| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Rattus
norvegicus]
Length = 2080
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 899 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 958
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 959 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 1018
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 1019 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1078
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1079 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1112
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 787 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 841
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 842 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 885
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 886 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 918
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G
Sbjct: 851 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTG 895
>gi|383415425|gb|AFH30926.1| chromodomain-helicase-DNA-binding protein 3 isoform 1 [Macaca
mulatta]
Length = 1996
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 818 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 877
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 878 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 937
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 938 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 997
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 998 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1031
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 706 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 760
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 761 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 804
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 805 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 837
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 770 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 816
>gi|301625546|ref|XP_002941964.1| PREDICTED: hypothetical protein LOC100495935, partial [Xenopus
(Silurana) tropicalis]
Length = 1258
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 137/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W +
Sbjct: 996 SRAVIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAVLGSIDWACLV 1055
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 1056 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 1115
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 1116 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKFILT 1175
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 1176 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1209
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 73/129 (56%), Gaps = 23/129 (17%)
Query: 4 IKKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
+++P P VK ++ P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 881 VERPPDTPAVDPTVKYDRQPEYLDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG-- 938
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW 120
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 939 -----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMW 981
Query: 121 T-DLNVIVY 128
D+ V+ Y
Sbjct: 982 APDMYVVTY 990
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 948 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 994
>gi|332847232|ref|XP_003339343.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Pan
troglodytes]
Length = 2000
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>gi|52630326|ref|NP_001005273.1| chromodomain-helicase-DNA-binding protein 3 isoform 1 [Homo sapiens]
gi|88911273|sp|Q12873.3|CHD3_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 3;
Short=CHD-3; AltName: Full=ATP-dependent helicase CHD3;
AltName: Full=Mi-2 autoantigen 240 kDa protein; AltName:
Full=Mi2-alpha; AltName: Full=Zinc finger helicase;
Short=hZFH
gi|119610521|gb|EAW90115.1| chromodomain helicase DNA binding protein 3, isoform CRA_b [Homo
sapiens]
Length = 2000
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>gi|348560832|ref|XP_003466217.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Cavia
porcellus]
Length = 1995
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 816 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 875
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 876 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 935
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 936 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 995
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 996 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1029
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 704 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 758
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 759 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 802
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 803 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 835
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 768 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 814
>gi|397477893|ref|XP_003810301.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Pan paniscus]
Length = 2011
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>gi|426384011|ref|XP_004058570.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1
[Gorilla gorilla gorilla]
Length = 2000
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>gi|52630322|ref|NP_005843.2| chromodomain-helicase-DNA-binding protein 3 isoform 2 [Homo sapiens]
gi|119610520|gb|EAW90114.1| chromodomain helicase DNA binding protein 3, isoform CRA_a [Homo
sapiens]
gi|119610522|gb|EAW90116.1| chromodomain helicase DNA binding protein 3, isoform CRA_a [Homo
sapiens]
Length = 1966
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>gi|62530244|gb|AAX85379.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus
norvegicus]
gi|62530246|gb|AAX85380.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus
norvegicus]
gi|62530248|gb|AAX85381.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus
norvegicus]
gi|62530250|gb|AAX85382.1| chromodomain helicase DNA-binding protein 3 long isoform [Rattus
norvegicus]
Length = 1959
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 778 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 837
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 838 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 897
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 898 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 957
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 958 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 991
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 666 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 720
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 721 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 764
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 765 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 797
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 730 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 776
>gi|52545633|emb|CAH56377.1| hypothetical protein [Homo sapiens]
Length = 1061
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 161 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 220
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 221 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 280
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 281 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 340
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 341 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 374
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 47 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 103
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 104 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 147
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 148 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 180
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 113 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 163
>gi|392351358|ref|XP_220602.6| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Rattus
norvegicus]
Length = 2069
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 888 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 947
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 948 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 1007
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 1008 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1067
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1068 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1101
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 776 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 830
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 831 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 874
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 875 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 907
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 840 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 886
>gi|403274994|ref|XP_003929245.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1
[Saimiri boliviensis boliviensis]
Length = 2000
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>gi|426384013|ref|XP_004058571.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2
[Gorilla gorilla gorilla]
Length = 1966
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>gi|402898650|ref|XP_003912333.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1
[Papio anubis]
Length = 2000
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>gi|332847234|ref|XP_003315413.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2 [Pan
troglodytes]
Length = 1966
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>gi|148678548|gb|EDL10495.1| mCG140617 [Mus musculus]
Length = 1826
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 644 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 703
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 704 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 763
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 764 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 823
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 824 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 857
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 532 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 586
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 587 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 630
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 631 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 663
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 596 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 642
>gi|440906808|gb|ELR57029.1| Chromodomain-helicase-DNA-binding protein 3, partial [Bos grunniens
mutus]
Length = 1940
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 789 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 848
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 849 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 908
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 909 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 968
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 969 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1002
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 677 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 731
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 732 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 775
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 776 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 808
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 741 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 787
>gi|354469736|ref|XP_003497281.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3-like [Cricetulus griseus]
Length = 1959
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 838 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 897
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 898 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 957
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 958 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1017
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1018 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1051
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 726 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 780
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 781 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 824
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 825 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 857
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 790 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 836
>gi|332847230|ref|XP_512012.3| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 3 [Pan
troglodytes]
Length = 2058
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 880 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 939
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 940 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 999
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 1000 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1059
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1060 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1093
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 768 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 822
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 823 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 866
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 867 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 899
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G
Sbjct: 832 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTG 876
>gi|311268331|ref|XP_003131999.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1 [Sus
scrofa]
Length = 1968
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>gi|2645433|gb|AAB87383.1| CHD3 [Homo sapiens]
Length = 1944
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>gi|3298562|gb|AAC39923.1| zinc-finger helicase [Homo sapiens]
Length = 2000
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>gi|359076762|ref|XP_003587462.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Bos taurus]
Length = 1833
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 654 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 713
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 714 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 773
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 774 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 833
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 834 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 867
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 542 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 596
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 597 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 640
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 641 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 673
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 606 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 652
>gi|403274996|ref|XP_003929246.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1966
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>gi|355753729|gb|EHH57694.1| hypothetical protein EGM_07385 [Macaca fascicularis]
Length = 1961
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 783 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 842
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 843 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 902
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 903 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 962
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 963 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 996
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMGLGKTI
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTI 769
Query: 65 QSL 67
Q++
Sbjct: 770 QTI 772
>gi|348571006|ref|XP_003471287.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Cavia
porcellus]
Length = 2442
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 1177 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 1236
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 1237 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 1296
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 1297 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 1356
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 1357 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1390
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 1063 EKPPDTPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 1119
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 1120 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 1163
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 1164 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 1196
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 1129 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 1179
>gi|449486846|ref|XP_004174324.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 5 [Taeniopygia guttata]
Length = 2088
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 711 SRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLV 770
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 771 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 830
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 831 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 890
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 891 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 924
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 79/149 (53%), Gaps = 34/149 (22%)
Query: 17 VKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 609 VKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--------------- 653
Query: 75 DEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFV 133
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W F
Sbjct: 654 ----LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA--------PDFY 701
Query: 134 VLLQTGSKFFRICL---EF-FVDAVFKTG 158
V+ TG K R + EF F D ++G
Sbjct: 702 VVTYTGDKESRSVIRENEFSFEDNAIRSG 730
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 663 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 713
>gi|417413984|gb|JAA53300.1| Putative chromatin remodeling complex wstf-iswi small subunit,
partial [Desmodus rotundus]
Length = 1846
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 789 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 848
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 849 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 908
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 909 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 968
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 969 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1002
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 677 PPNSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 731
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 732 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 775
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 776 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 808
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G
Sbjct: 741 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTG 785
>gi|332250910|ref|XP_003274592.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Nomascus leucogenys]
Length = 1985
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>gi|357527416|ref|NP_666131.3| chromodomain helicase DNA binding protein 3 [Mus musculus]
Length = 2055
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 874 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 933
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 934 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 993
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 994 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1053
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1054 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1087
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 762 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 816
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 817 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 860
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 861 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 893
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 826 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 872
>gi|345800551|ref|XP_536627.3| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Canis lupus familiaris]
Length = 1999
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 821 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 880
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 881 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 940
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 941 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1000
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1001 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1034
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 709 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 763
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 764 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 807
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 808 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 840
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 773 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 819
>gi|303287156|ref|XP_003062867.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455503|gb|EEH52806.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1542
Score = 186 bits (473), Expect = 2e-44, Method: Composition-based stats.
Identities = 95/218 (43%), Positives = 138/218 (63%), Gaps = 6/218 (2%)
Query: 297 ASRNMLQEYELFFRNDK----NQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
A+R +++ +EL + +D+ + + YK V++TT+E++ +D L W ++
Sbjct: 465 AARALVRAHELTYDDDEVTEDAEDVMSGATYKADVVLTTYEMVQADRSALSKIPWSCLVV 524
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRV-LLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
DEAHRLKN + LR L RV LL+GTPLQN+ EL+SLLNF++ Q+F++ E F
Sbjct: 525 DEAHRLKNSGGRAARDLRTLDFAGRVVLLTGTPLQNDTAELWSLLNFVDAQRFASKEDFE 584
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
+FG +K +V L +L P +LRRLK DVE + P+ ET++E EL +QKK YR + E
Sbjct: 585 KKFGAVKAAGQVEALHKVLAPYLLRRLKCDVEHKLPPRVETLIECELAPLQKKCYRALFE 644
Query: 472 RNFSFLSKGTTSAN-VPNLMNTMMELRKCCIHPYLLNG 508
RNFSFL +G A + N N MME+RKCC HP+LL+G
Sbjct: 645 RNFSFLRQGCGDARALANFTNLMMEVRKCCQHPFLLDG 682
Score = 73.9 bits (180), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/101 (40%), Positives = 50/101 (49%), Gaps = 27/101 (26%)
Query: 29 NTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTF 88
+ LR YQ EG W+ N ++A R CILADEMGLGKT QSL
Sbjct: 369 DVLRGYQREGARWM------AHNVVVA------------RRGCILADEMGLGKTAQSLAL 410
Query: 89 VDAVF---------KTGIRGPFLVIAPLSTIPNWQREFEAW 120
VD + + RGP LV+ PLST+ NW+RE W
Sbjct: 411 VDYILRCERATPNPRVAPRGPALVVVPLSTLVNWEREAARW 451
>gi|395836468|ref|XP_003791176.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 1
[Otolemur garnettii]
Length = 1998
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 819 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSICWACLV 878
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 879 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 938
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 939 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 998
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 999 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1032
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 707 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 761
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 762 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 805
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 806 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 838
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 771 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 817
>gi|334323402|ref|XP_001369227.2| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Monodelphis
domestica]
Length = 2114
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F ++ + KFHVL+T++E+I D L W +
Sbjct: 973 SRAIIRENEFSFEDNAIKGGKKAFKMRREAQVKFHVLLTSYELITIDQAALGSIRWACLV 1032
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 1033 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 1092
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 1093 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1152
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1153 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1186
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 861 PPTSPTNDPTVKYENQPRFITATGGTLHLYQLEGLNWLRFSWAQGTDTILADEMG----- 915
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 916 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 959
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 960 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 992
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 925 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 971
>gi|224043897|ref|XP_002197085.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Taeniopygia
guttata]
Length = 1919
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 806 SRAIIRENEFTFEDNAIRGGKKASRMKKEAAVKFHVLLTSYELITIDMAILGSIDWACLI 865
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 866 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 925
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 926 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 985
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 986 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1019
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 75/129 (58%), Gaps = 23/129 (17%)
Query: 4 IKKPKKKPPASDWVKLEKSPVYKN--DNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
+++P + P VK ++ P Y + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 691 LERPPETPTVDPTVKYDRQPEYLDVTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG-- 748
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW 120
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 749 -----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMW 791
Query: 121 T-DLNVIVY 128
D+ V+ Y
Sbjct: 792 APDMYVVTY 800
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 758 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 804
>gi|52545542|emb|CAH56404.1| hypothetical protein [Homo sapiens]
Length = 1059
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 168 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 227
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 228 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 287
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 288 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 347
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 348 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 381
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 54 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 110
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 111 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 154
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 155 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 187
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 120 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 170
>gi|224071533|ref|XP_002303505.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222840937|gb|EEE78484.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 2327
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 138/213 (64%), Gaps = 1/213 (0%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ +R M+++YE N N+ K+ YKF+VL+TT+E++++D L+ W + ++DE
Sbjct: 830 AKARAMIRQYEWHASN-PNEMNKKTTSYKFNVLLTTYEMVLADSTYLRGVPWEVLVVDEG 888
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN KL L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F +F
Sbjct: 889 HRLKNSGSKLFNLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 948
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
L T +V +L+ L+ P MLRRLK+D ++I PK E +V VEL++IQ +YYR +L +N+
Sbjct: 949 DLTTTEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERIVPVELSSIQAEYYRAMLTKNYQ 1008
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +++N +M+LRK C HPYL+ G
Sbjct: 1009 MLRNIGKGVAQQSMLNIVMQLRKICNHPYLIPG 1041
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 19/102 (18%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
+L +QLE LNWL W +N ILADEMGLGKT+ + C I SL
Sbjct: 745 SLFPHQLEALNWLRKCWHRSKNVILADEMGLGKTVSA----CAF---------ISSL--- 788
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
F+ + P LV+ PLST+PNW EF W +LNV+ YH
Sbjct: 789 --YFELKVSLPCLVLVPLSTMPNWLSEFALWAPNLNVVEYHG 828
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F F+ + P LV+ PLST+PNW EF W +LNV+ YHG
Sbjct: 784 FISSLYFELKVSLPCLVLVPLSTMPNWLSEFALWAPNLNVVEYHG 828
>gi|355678671|gb|AER96180.1| chromodomain helicase DNA binding protein 3 [Mustela putorius furo]
Length = 1740
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 697 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 756
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 757 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 816
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 817 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 876
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 877 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 910
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 585 PPSSPTNDPTVKYESQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 639
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 640 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 683
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 684 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 716
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 649 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 695
>gi|431906391|gb|ELK10588.1| Chromodomain-helicase-DNA-binding protein 5 [Pteropus alecto]
Length = 1842
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 681 SRSVIRENEFSFEDNAVRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 740
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 741 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 800
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 801 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 860
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 861 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 894
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 79/149 (53%), Gaps = 34/149 (22%)
Query: 17 VKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 579 VKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--------------- 623
Query: 75 DEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFV 133
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W F
Sbjct: 624 ----LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA--------PDFY 671
Query: 134 VLLQTGSKFFRICL---EF-FVDAVFKTG 158
V+ TG K R + EF F D ++G
Sbjct: 672 VVTYTGDKESRSVIRENEFSFEDNAVRSG 700
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 633 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 683
>gi|355766839|gb|EHH62560.1| hypothetical protein EGM_20938, partial [Macaca fascicularis]
Length = 1262
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 138 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 197
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 198 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 257
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 258 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 317
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 318 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 351
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 24 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 80
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 81 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 124
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 125 PDMYVVTY 132
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 90 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 136
>gi|390462993|ref|XP_002806848.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3, partial [Callithrix jacchus]
Length = 1943
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 812 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 992 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1025
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 700 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 754
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 755 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 798
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 799 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 831
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G
Sbjct: 764 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTG 808
>gi|363728319|ref|XP_003640489.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 4 [Gallus gallus]
Length = 1924
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 813 SRAIIRENEFTFEDNAIRGGKKASRMKKEAAVKFHVLLTSYELITIDMAILGSIDWACLI 872
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 873 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 932
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 933 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 992
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 993 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1026
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 75/129 (58%), Gaps = 23/129 (17%)
Query: 4 IKKPKKKPPASDWVKLEKSPVYKN--DNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
+++P + P VK ++ P Y + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 698 LERPPETPTVDPTVKYDRQPEYLDVTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG-- 755
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW 120
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 756 -----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMW 798
Query: 121 T-DLNVIVY 128
D+ V+ Y
Sbjct: 799 APDMYVVTY 807
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 765 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 811
>gi|444728247|gb|ELW68711.1| Chromodomain-helicase-DNA-binding protein 5 [Tupaia chinensis]
Length = 2128
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 734 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 793
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 794 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 853
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 854 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 913
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 914 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 947
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 620 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 676
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 677 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 720
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 721 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 753
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 686 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 736
>gi|395836470|ref|XP_003791177.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 isoform 2
[Otolemur garnettii]
Length = 1964
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 819 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSICWACLV 878
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 879 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 938
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 939 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 998
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 999 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1032
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 707 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 761
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 762 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 805
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 806 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 838
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 771 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 817
>gi|326912771|ref|XP_003202720.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like
[Meleagris gallopavo]
Length = 1922
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 813 SRAIIRENEFTFEDNAIRGGKKASRMKKEAAVKFHVLLTSYELITIDMAILGSIDWACLI 872
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 873 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 932
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 933 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 992
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 993 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1026
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 75/129 (58%), Gaps = 23/129 (17%)
Query: 4 IKKPKKKPPASDWVKLEKSPVYKN--DNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
+++P + P VK ++ P Y + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 698 LERPPETPTVDPTVKYDRQPEYLDVTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG-- 755
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW 120
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 756 -----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMW 798
Query: 121 T-DLNVIVY 128
D+ V+ Y
Sbjct: 799 APDMYVVTY 807
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 765 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 811
>gi|344290176|ref|XP_003416814.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Loxodonta
africana]
Length = 1863
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 728 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 787
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 788 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 847
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 848 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 907
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 908 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 941
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 80/162 (49%), Gaps = 34/162 (20%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 616 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 670
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 671 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 714
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTGIRG 161
F V+ TG K R + EF F D K G +
Sbjct: 715 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKA 750
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 680 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 726
>gi|332838463|ref|XP_508960.3| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 4 isoform 3 [Pan troglodytes]
Length = 1825
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 725 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 784
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 785 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 844
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 845 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 904
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 905 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 938
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 611 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 667
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 668 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 711
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 712 PDMYVVTY 719
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 677 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 723
>gi|395533467|ref|XP_003768781.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 3 [Sarcophilus harrisii]
Length = 1971
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F ++ + KFHVL+T++E+I D L W +
Sbjct: 797 SRAIIRENEFSFEDNAIKGGKKAFKMRREAQVKFHVLLTSYELITIDQAALGSIRWACLV 856
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 857 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 916
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 917 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 976
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 977 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1010
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 685 PPTSPTNDPTVKYENQPRFITATGGTLHLYQLEGLNWLRFSWAQGTDTILADEMG----- 739
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 740 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 783
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 784 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 816
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 749 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 795
>gi|5911978|emb|CAB55959.1| hypothetical protein [Homo sapiens]
Length = 1388
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 220 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 279
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 280 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 339
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 340 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 399
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 400 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 433
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 106 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 162
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 163 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 206
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 207 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 239
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 172 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 222
>gi|410907027|ref|XP_003966993.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Takifugu
rubripes]
Length = 2102
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 137/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F + K F ++ + KFHVL+T++E++ D LK W +
Sbjct: 849 SRAIIRENEFCFDDTAVKAGKKTFKLRREAPIKFHVLLTSYELVTIDQTALKSIEWACLV 908
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P +F+N E F+
Sbjct: 909 VDEAHRLKNNQSKFFRRLNDYKIDHKLLLTGTPLQNNLEELFHLLNFLTPNRFNNLEGFL 968
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 969 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKHILT 1028
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+NF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 1029 KNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1062
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 81/155 (52%), Gaps = 35/155 (22%)
Query: 12 PASD-WVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
P +D +K E+ P V TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 741 PVTDPTIKYEEQPDFVTATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG--------- 791
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIV 127
LGKTIQ++ F+ ++FK G +GPFLV APLSTI NW+REFE W
Sbjct: 792 ----------LGKTIQTIVFLYSLFKEGHTKGPFLVSAPLSTIINWEREFEMWA------ 835
Query: 128 YHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 836 --PDFYVVTYTGDKDSRAIIRENEFCFDDTAVKAG 868
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ ++FK G +GPFLV APLSTI NW+REFE W D V+ Y G +
Sbjct: 801 FLYSLFKEGHTKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDK 847
>gi|355557485|gb|EHH14265.1| hypothetical protein EGK_00158 [Macaca mulatta]
Length = 2247
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 889 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 948
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 949 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 1008
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 1009 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 1068
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 1069 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1102
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 775 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 831
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 832 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 875
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 876 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 908
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 841 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 891
>gi|402471877|gb|EJW05386.1| hypothetical protein EDEG_00050 [Edhazardia aedis USNM 41457]
Length = 3003
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 139/184 (75%), Gaps = 5/184 (2%)
Query: 323 YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSG 382
Y F V+ITT+E+I+S L++ + + I DEAHRLKN K L+ ++ H+VLLSG
Sbjct: 1766 YYFDVIITTYEMIMSGLKHLENIEFYVGIFDEAHRLKNNTSKAAVALKSVYFNHKVLLSG 1825
Query: 383 TPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDV 442
TPLQNN+ EL+SLLNF++P++F N + F+ E+ K+E +V +LQLLLKP+MLRRLK+DV
Sbjct: 1826 TPLQNNLTELWSLLNFIDPEKFDNPQYFLEEYKMEKSE-DVERLQLLLKPLMLRRLKDDV 1884
Query: 443 EKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIH 502
E +I KEET++EVELT IQKK YR ILE+N FL+KG T PNL+N MMELRKCCIH
Sbjct: 1885 E-NIPVKEETIIEVELTMIQKKLYRAILEKNLEFLAKGNTH---PNLLNAMMELRKCCIH 1940
Query: 503 PYLL 506
P+L+
Sbjct: 1941 PFLI 1944
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 67/111 (60%), Gaps = 19/111 (17%)
Query: 24 VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTI 83
+KN+N LR YQLEGLNWL+ W ++CI+ADEMGLGKT+
Sbjct: 1621 TFKNNNKLRPYQLEGLNWLLNRWL-------------------FRQSCIMADEMGLGKTV 1661
Query: 84 QSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVV 134
QS+TF++ + GP LV+APLSTIP+W REFE W+DL V VYH
Sbjct: 1662 QSVTFINTLHTRYSAGPCLVVAPLSTIPHWVREFENWSDLRVTVYHGGIAA 1712
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F++ + GP LV+APLSTIP+W REFE W+DL V VYHG
Sbjct: 1666 FINTLHTRYSAGPCLVVAPLSTIPHWVREFENWSDLRVTVYHG 1708
>gi|363741929|ref|XP_003642567.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Gallus
gallus]
Length = 1947
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 776 SRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLV 835
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 836 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 895
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 896 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 955
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 956 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 989
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 79/149 (53%), Gaps = 34/149 (22%)
Query: 17 VKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 674 VKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--------------- 718
Query: 75 DEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFV 133
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W F
Sbjct: 719 ----LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA--------PDFY 766
Query: 134 VLLQTGSKFFRICL---EF-FVDAVFKTG 158
V+ TG K R + EF F D ++G
Sbjct: 767 VVTYTGDKESRSVIRENEFSFEDNAIRSG 795
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 728 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 778
>gi|431905346|gb|ELK10391.1| Chromodomain-helicase-DNA-binding protein 4 [Pteropus alecto]
Length = 1854
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 754 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 813
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 814 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 873
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 874 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 933
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 934 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 967
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 640 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 696
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 697 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 740
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 741 PDMYVVTY 748
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 706 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 752
>gi|326932279|ref|XP_003212247.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like,
partial [Meleagris gallopavo]
Length = 1949
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 761 SRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLV 820
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 821 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 880
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 881 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 940
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 941 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 974
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 79/149 (53%), Gaps = 34/149 (22%)
Query: 17 VKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 659 VKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--------------- 703
Query: 75 DEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFV 133
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W F
Sbjct: 704 ----LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA--------PDFY 751
Query: 134 VLLQTGSKFFRICL---EF-FVDAVFKTG 158
V+ TG K R + EF F D ++G
Sbjct: 752 VVTYTGDKESRSVIRENEFSFEDNAIRSG 780
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 713 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 763
>gi|189521245|ref|XP_696641.3| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Danio rerio]
Length = 2063
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F + K F ++ + KFHVL+T++E++ D LK +W +
Sbjct: 837 SRAIIRENEFTFDDTAVKGGKKAFKLRREAPIKFHVLLTSYELVTIDQNVLKSIDWACLV 896
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P +F+N E F+
Sbjct: 897 VDEAHRLKNNQSKFFRRLNDYKIDHKLLLTGTPLQNNLEELFHLLNFLTPNRFNNLEGFL 956
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 957 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKFILT 1016
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 1017 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1050
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 80/152 (52%), Gaps = 34/152 (22%)
Query: 17 VKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
+K E+ P V + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 735 IKYEEQPEFVTETGGTLHLYQLEGLNWLRFSWAQGTDTILADEMG--------------- 779
Query: 75 DEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFV 133
LGKTIQ++ F+ ++FK G +GPFLV APLSTI NW+REFE W F
Sbjct: 780 ----LGKTIQTIVFLYSLFKEGHTKGPFLVSAPLSTIINWEREFEMWA--------PDFY 827
Query: 134 VLLQTGSKFFRICL---EF-FVDAVFKTGIRG 161
V+ TG K R + EF F D K G +
Sbjct: 828 VVTYTGDKDSRAIIRENEFTFDDTAVKGGKKA 859
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ ++FK G +GPFLV APLSTI NW+REFE W D V+ Y G +
Sbjct: 789 FLYSLFKEGHTKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDK 835
>gi|291392737|ref|XP_002712922.1| PREDICTED: chromodomain helicase DNA binding protein 4-like isoform 1
[Oryctolagus cuniculus]
Length = 1905
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 805 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 864
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 865 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 924
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 925 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 984
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 985 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1018
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 691 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 747
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 748 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 791
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 792 PDMYVVTY 799
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 757 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 803
>gi|156717248|ref|NP_001096166.1| chromodomain helicase DNA binding protein 4 [Xenopus (Silurana)
tropicalis]
gi|126631946|gb|AAI33720.1| chd4 protein [Xenopus (Silurana) tropicalis]
Length = 1888
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 137/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W +
Sbjct: 802 SRAVIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAVLGSIDWACLV 861
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 862 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 921
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 922 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKFILT 981
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 982 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1015
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 73/129 (56%), Gaps = 23/129 (17%)
Query: 4 IKKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
+++P P VK ++ P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 687 VERPPDTPAVDPTVKYDRQPEYLDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG-- 744
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW 120
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 745 -----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMW 787
Query: 121 T-DLNVIVY 128
D+ V+ Y
Sbjct: 788 APDMYVVTY 796
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 754 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 800
>gi|348530512|ref|XP_003452755.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Oreochromis
niloticus]
Length = 1950
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 138/218 (63%), Gaps = 9/218 (4%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K+ KFHVL+T++E+I D L +W +
Sbjct: 808 SRAVIRENEFSFEDNAVRGGKKASRLKKDVSIKFHVLLTSYELITIDMAVLGSIDWACLV 867
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++FSN E F+
Sbjct: 868 VDEAHRLKNNQSKFFRVLNNYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFSNLEIFL 927
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K + K E +V VEL+ +QKKYY+ IL
Sbjct: 928 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSQLQKKYYKFILT 987
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+NF L +KG N +L+N +M+L+KCC HPYL G
Sbjct: 988 KNFEALNTKG--GGNQVSLLNVVMDLKKCCNHPYLFPG 1023
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 77/132 (58%), Gaps = 26/132 (19%)
Query: 4 IKKPKKKP--PASD-WVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEM 58
+K+P++ P P D +K E+ P Y TL YQLEGLNWL FSW G + ILADEM
Sbjct: 690 VKRPERPPENPVIDPTIKFERQPEYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEM 749
Query: 59 GLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREF 117
G LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REF
Sbjct: 750 G-------------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREF 790
Query: 118 EAWT-DLNVIVY 128
E W D+ V+ Y
Sbjct: 791 EMWAPDMYVVTY 802
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 760 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 806
>gi|355678680|gb|AER96183.1| chromodomain helicase DNA binding protein 4 [Mustela putorius furo]
Length = 1457
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 731 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 790
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 791 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 850
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 851 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 910
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 911 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 944
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 617 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 673
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 674 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 717
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 718 PDMYVVTY 725
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 98 RGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVVLLQTGSKFFRICLEFFVDAVFKT 157
R P + A T+ +Q E W L T +L + F+ +++K
Sbjct: 633 RQPEYLDATGGTLHPYQMEGLNW--LRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKE 690
Query: 158 G-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 691 GHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 729
>gi|441670660|ref|XP_003273866.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 4 [Nomascus leucogenys]
Length = 1910
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 810 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 869
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 870 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 929
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 930 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 989
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 990 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1023
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 696 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 752
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 753 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 796
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 797 PDMYVVTY 804
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 762 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 808
>gi|384945020|gb|AFI36115.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
Length = 1700
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 805 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 864
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 865 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 924
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 925 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 984
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 985 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1018
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 691 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 747
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 748 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 791
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 792 PDMYVVTY 799
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 98 RGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVVLLQTGSKFFRICLEFFVDAVFKT 157
R P + A T+ +Q E W L T +L + F+ +++K
Sbjct: 707 RQPEYLDATGGTLHPYQMEGLNW--LRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKE 764
Query: 158 G-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 765 GHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 803
>gi|410963637|ref|XP_003988370.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 2
[Felis catus]
Length = 1905
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 805 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 864
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 865 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 924
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 925 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 984
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 985 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1018
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 691 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 747
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 748 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 791
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 792 PDMYVVTY 799
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 757 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 803
>gi|410301140|gb|JAA29170.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
Length = 1914
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|296479122|tpg|DAA21237.1| TPA: chromodomain helicase DNA binding protein 5 [Bos taurus]
Length = 2099
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 874 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 933
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 934 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 993
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 994 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 1053
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 1054 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1087
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 760 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 816
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 817 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 860
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 861 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 893
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 826 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 876
>gi|426240369|ref|XP_004014081.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Ovis aries]
Length = 2056
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 770 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 829
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 830 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 889
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 890 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 949
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 950 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 983
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 656 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 712
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 713 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 756
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 757 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 789
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 722 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 772
>gi|403297789|ref|XP_003939734.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Saimiri
boliviensis boliviensis]
Length = 2203
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 1036 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 1095
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 1096 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 1155
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 1156 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 1215
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 1216 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1249
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 922 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 978
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 979 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 1022
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 1023 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 1055
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 988 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 1038
>gi|355563925|gb|EHH20425.1| hypothetical protein EGK_03279 [Macaca mulatta]
Length = 1899
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 799 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 858
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 859 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 918
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 919 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 978
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 979 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1012
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 685 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 741
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 742 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 785
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 786 PDMYVVTY 793
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 751 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 797
>gi|440895655|gb|ELR47793.1| Chromodomain-helicase-DNA-binding protein 4 [Bos grunniens mutus]
Length = 1945
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|395526186|ref|XP_003765249.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Sarcophilus
harrisii]
Length = 2043
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 788 SRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAILGSIEWACLV 847
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 848 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 907
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 908 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 967
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 968 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1001
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 82/159 (51%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P + P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 676 PPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG----- 730
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKT+Q++ ++ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 731 --------------LGKTVQTIVYLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA-- 774
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 775 ------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 807
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
++ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 740 YLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 790
>gi|351715692|gb|EHB18611.1| Chromodomain-helicase-DNA-binding protein 4 [Heterocephalus glaber]
Length = 1912
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|60360510|dbj|BAD90499.1| mKIAA4075 protein [Mus musculus]
Length = 1945
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 833 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 892
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 893 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 952
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 953 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 1012
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 1013 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1046
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 719 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 775
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 776 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 819
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 820 PDMYVVTY 827
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 785 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 831
>gi|397499204|ref|XP_003820349.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 1 [Pan
paniscus]
gi|410350197|gb|JAA41702.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
Length = 1905
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 805 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 864
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 865 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 924
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 925 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 984
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 985 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1018
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 691 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 747
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 748 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 791
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 792 PDMYVVTY 799
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 757 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 803
>gi|395743837|ref|XP_002822857.2| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 4 [Pongo abelii]
Length = 1898
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 794 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 853
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 854 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 913
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 914 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 973
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 974 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1007
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 680 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 736
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 737 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 780
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 781 PDMYVVTY 788
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 746 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 792
>gi|301773764|ref|XP_002922290.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 4-like [Ailuropoda melanoleuca]
Length = 1906
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 806 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 865
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 866 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 925
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 926 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 985
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 986 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1019
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 692 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 748
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 749 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 792
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 793 PDMYVVTY 800
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 758 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 804
>gi|291392739|ref|XP_002712923.1| PREDICTED: chromodomain helicase DNA binding protein 4-like isoform 2
[Oryctolagus cuniculus]
Length = 1912
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|395841073|ref|XP_003793373.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Otolemur
garnettii]
Length = 2088
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 924 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 983
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 984 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 1043
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 1044 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 1103
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 1104 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1137
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 810 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 866
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 867 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 910
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 911 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 943
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 876 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 926
>gi|334348294|ref|XP_001369474.2| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Monodelphis
domestica]
Length = 1823
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 723 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 782
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 783 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 842
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 843 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 902
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 903 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 936
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 609 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 665
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 666 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 709
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 710 PDMYVVTY 717
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 675 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 721
>gi|354467283|ref|XP_003496099.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Cricetulus
griseus]
Length = 1902
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 786 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 845
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 846 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 905
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 906 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 965
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 966 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 999
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 672 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 728
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 729 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 772
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 773 PDMYVVTY 780
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 738 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 784
>gi|194211609|ref|XP_001496418.2| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Equus
caballus]
Length = 1912
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|380809128|gb|AFE76439.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
gi|383415429|gb|AFH30928.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
gi|384945024|gb|AFI36117.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
Length = 1905
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 805 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 864
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 865 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 924
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 925 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 984
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 985 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1018
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 691 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 747
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 748 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 791
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 792 PDMYVVTY 799
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 757 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 803
>gi|390467440|ref|XP_002752322.2| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Callithrix
jacchus]
Length = 1814
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 802 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 861
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 862 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 921
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 922 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 981
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 982 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1015
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 688 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWVQGTDTILADEMG--- 744
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 745 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 788
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 789 PDMYVVTY 796
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 98 RGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVVLLQTGSKFFRICLEFFVDAVFKT 157
R P + A T+ +Q E W + + T +L + F+ +++K
Sbjct: 704 RQPEYLDATGGTLHPYQMEGLNWLRFSWV--QGTDTILADEMGLGKTVQTAVFLYSLYKE 761
Query: 158 G-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 762 GHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 800
>gi|383415433|gb|AFH30930.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
gi|384945022|gb|AFI36116.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
Length = 1912
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|359074223|ref|XP_002694217.2| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Bos taurus]
Length = 2042
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 874 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 933
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 934 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 993
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 994 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 1053
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 1054 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1087
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 760 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 816
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 817 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 860
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 861 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 893
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 826 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 876
>gi|330417956|ref|NP_001193430.1| chromodomain-helicase-DNA-binding protein 4 [Bos taurus]
gi|296487143|tpg|DAA29256.1| TPA: chromodomain helicase DNA binding protein 4 [Bos taurus]
Length = 1912
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|444510914|gb|ELV09761.1| Chromodomain-helicase-DNA-binding protein 4 [Tupaia chinensis]
Length = 1875
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 773 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 832
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 833 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 892
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 893 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 952
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 953 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 986
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 659 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 715
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 716 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 759
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 760 PDMYVVTY 767
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 725 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 771
>gi|417414010|gb|JAA53313.1| Putative chromatin remodeling complex wstf-iswi small subunit,
partial [Desmodus rotundus]
Length = 1916
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 816 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 875
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 876 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 935
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 936 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 995
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 996 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1029
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 702 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 758
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 759 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 802
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 803 PDMYVVTY 810
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 768 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 814
>gi|297261645|ref|XP_001107252.2| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like isoform 8
[Macaca mulatta]
Length = 1912
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|403303237|ref|XP_003942247.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Saimiri
boliviensis boliviensis]
Length = 1888
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|348555034|ref|XP_003463329.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Cavia
porcellus]
Length = 1893
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 793 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 852
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 853 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 912
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 913 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 972
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 973 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1006
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 679 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 735
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 736 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 779
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 780 PDMYVVTY 787
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 745 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 791
>gi|344242425|gb|EGV98528.1| Chromodomain-helicase-DNA-binding protein 4 [Cricetulus griseus]
Length = 1930
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 786 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 845
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 846 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 905
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 906 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 965
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 966 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 999
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 672 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 728
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 729 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 772
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 773 PDMYVVTY 780
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 738 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 784
>gi|426371465|ref|XP_004052667.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Gorilla
gorilla gorilla]
Length = 1759
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 805 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 864
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 865 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 924
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 925 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 984
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 985 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1018
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 691 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 747
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 748 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 791
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 792 PDMYVVTY 799
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 757 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 803
>gi|24047226|gb|AAH38596.1| CHD4 protein [Homo sapiens]
gi|167773199|gb|ABZ92034.1| chromodomain helicase DNA binding protein 4 [synthetic construct]
Length = 1937
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 809 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 868
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 869 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 928
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 929 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 988
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 989 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1022
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 695 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 751
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 752 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 795
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 796 PDMYVVTY 803
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 761 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 807
>gi|39204553|ref|NP_666091.1| chromodomain-helicase-DNA-binding protein 4 [Mus musculus]
gi|51701319|sp|Q6PDQ2.1|CHD4_MOUSE RecName: Full=Chromodomain-helicase-DNA-binding protein 4;
Short=CHD-4
gi|35193271|gb|AAH58578.1| Chromodomain helicase DNA binding protein 4 [Mus musculus]
Length = 1915
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 805 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 864
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 865 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 924
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 925 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 984
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 985 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1018
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 691 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 747
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 748 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 791
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 792 PDMYVVTY 799
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 757 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 803
>gi|410963635|ref|XP_003988369.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 1
[Felis catus]
Length = 1912
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|395847597|ref|XP_003796455.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Otolemur
garnettii]
Length = 1912
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|344282967|ref|XP_003413244.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Loxodonta
africana]
Length = 2101
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 810 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 869
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 870 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 929
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 930 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 989
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 990 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1023
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 84/161 (52%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP + P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 696 EKPPETPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 752
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 753 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 796
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 797 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 829
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 762 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 812
>gi|432111850|gb|ELK34892.1| Chromodomain-helicase-DNA-binding protein 4 [Myotis davidii]
Length = 1912
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|124487025|ref|NP_001074845.1| chromodomain helicase DNA binding protein 5 isoform 1 [Mus musculus]
Length = 1952
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 139/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R K F +K++ KFHVL+T++E+I D L W +
Sbjct: 788 SRSVIRENEFSFEDNAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 847
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 848 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 907
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 908 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 967
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 968 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1001
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 82/161 (50%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 674 EKPPDTPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 730
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 731 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 774
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D + G
Sbjct: 775 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRGG 807
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 740 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 790
>gi|426227030|ref|XP_004007632.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Ovis aries]
Length = 1963
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 863 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 922
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 923 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 982
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 983 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 1042
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 1043 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1076
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 749 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 805
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 806 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 849
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 850 PDMYVVTY 857
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 815 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 861
>gi|410966154|ref|XP_003989600.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Felis catus]
Length = 2003
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 812 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 991
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 992 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 698 QKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 798
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 799 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 831
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 764 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 814
>gi|410301138|gb|JAA29169.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
Length = 1912
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|350585547|ref|XP_003481984.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Sus
scrofa]
Length = 1865
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 779 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 838
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 839 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 898
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 899 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 958
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 959 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 992
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 665 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 721
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 722 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 765
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 766 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 798
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 731 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 781
>gi|380798783|gb|AFE71267.1| chromodomain-helicase-DNA-binding protein 4, partial [Macaca
mulatta]
Length = 1847
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 747 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 806
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 807 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 866
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 867 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 926
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 927 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 960
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 633 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 689
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 690 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 733
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 734 PDMYVVTY 741
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 699 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 745
>gi|358416078|ref|XP_609360.5| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Bos taurus]
Length = 1991
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 823 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 882
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 883 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 942
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 943 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 1002
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 1003 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1036
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 709 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 765
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 766 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 809
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 810 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 842
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 775 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 825
>gi|440493323|gb|ELQ75812.1| Chromodomain-helicase DNA-binding protein [Trachipleistophora
hominis]
Length = 1435
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 144/213 (67%), Gaps = 19/213 (8%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ +R+++ +YE + D F VLITT+E+++S L FN+ + + DEA
Sbjct: 471 NVARDLIYDYEFY-----------NDGLLFDVLITTYEMVMSGMKHLS-FNFGIGVFDEA 518
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN + K + L L H++LLSGTPLQNN+ EL+SLL+FL+P + + F+ +
Sbjct: 519 HRLKNSHSKAFQSLISLSFNHKILLSGTPLQNNLTELWSLLHFLDPIKNESLSYFLESY- 577
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
+L+ +V++L+ LLKP+MLRR+K+DVEK I KEET+VEVELT IQK++YR I+E+N S
Sbjct: 578 KLEKSEDVDRLKTLLKPVMLRRMKDDVEK-IPIKEETIVEVELTMIQKQFYRAIIEKNLS 636
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
K + PNL+N MMELRKCCIHPYL+ G
Sbjct: 637 IFEKES-----PNLLNVMMELRKCCIHPYLVRG 664
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 76/125 (60%), Gaps = 22/125 (17%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP V S +KN NTLR YQ+EGLNWL+ W+ +
Sbjct: 371 RPPKDALVI---SKPFKNGNTLRDYQMEGLNWLLNRWY-------------------YKQ 408
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
CI+ADEMGLGKT+Q++ FV+ VF+TG + P L++APLST+ +W+REF WTDL +++YH
Sbjct: 409 GCIMADEMGLGKTVQTVCFVNKVFETGYQHPVLIVAPLSTLIHWEREFRTWTDLRILLYH 468
Query: 130 ATFVV 134
V
Sbjct: 469 GNNVA 473
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 35/43 (81%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV+ VF+TG + P L++APLST+ +W+REF WTDL +++YHG
Sbjct: 427 FVNKVFETGYQHPVLIVAPLSTLIHWEREFRTWTDLRILLYHG 469
>gi|410227432|gb|JAA10935.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
gi|410350199|gb|JAA41703.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
Length = 1914
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|402884886|ref|XP_003905901.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Papio anubis]
Length = 1912
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|426327635|ref|XP_004024622.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Gorilla
gorilla gorilla]
Length = 2024
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 856 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 915
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 916 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 975
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 976 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 1035
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 1036 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1069
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 742 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 798
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 799 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 842
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 843 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 875
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 808 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 858
>gi|119609185|gb|EAW88779.1| chromodomain helicase DNA binding protein 4, isoform CRA_c [Homo
sapiens]
Length = 1908
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 809 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 868
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 869 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 928
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 929 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 988
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 989 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1022
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 695 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 751
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 752 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 795
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 796 PDMYVVTY 803
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 761 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 807
>gi|345791649|ref|XP_867754.2| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 3
[Canis lupus familiaris]
Length = 1912
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|51599156|ref|NP_001264.2| chromodomain-helicase-DNA-binding protein 4 [Homo sapiens]
gi|311033360|sp|Q14839.2|CHD4_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 4;
Short=CHD-4; AltName: Full=ATP-dependent helicase CHD4;
AltName: Full=Mi-2 autoantigen 218 kDa protein; AltName:
Full=Mi2-beta
Length = 1912
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|397499206|ref|XP_003820350.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 2 [Pan
paniscus]
gi|1107696|emb|CAA60384.1| Mi-2 protein [Homo sapiens]
gi|119609184|gb|EAW88778.1| chromodomain helicase DNA binding protein 4, isoform CRA_b [Homo
sapiens]
gi|410227430|gb|JAA10934.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
gi|410350195|gb|JAA41701.1| chromodomain helicase DNA binding protein 4 [Pan troglodytes]
Length = 1912
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|24308089|ref|NP_056372.1| chromodomain-helicase-DNA-binding protein 5 [Homo sapiens]
gi|51701343|sp|Q8TDI0.1|CHD5_HUMAN RecName: Full=Chromodomain-helicase-DNA-binding protein 5;
Short=CHD-5; AltName: Full=ATP-dependent helicase CHD5
gi|19773960|gb|AAL98962.1|AF425231_1 chromodomain helicase DNA binding protein 5 [Homo sapiens]
gi|119591922|gb|EAW71516.1| chromodomain helicase DNA binding protein 5 [Homo sapiens]
gi|148922387|gb|AAI46382.1| Chromodomain helicase DNA binding protein 5 [synthetic construct]
gi|151555557|gb|AAI48804.1| Chromodomain helicase DNA binding protein 5 [synthetic construct]
gi|261857536|dbj|BAI45290.1| Chromodomain-helicase-DNA-binding protein 5 [synthetic construct]
Length = 1954
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 786 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 845
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 846 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 905
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 906 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 965
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 966 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 999
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 672 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 728
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 729 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 772
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 773 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 805
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 738 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 788
>gi|397503175|ref|XP_003822207.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Pan paniscus]
Length = 1957
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 789 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 848
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 849 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 908
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 909 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 968
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 969 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1002
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 675 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 731
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 732 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 775
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 776 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 808
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 741 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 791
>gi|403420600|ref|NP_001258155.1| chromodomain-helicase-DNA-binding protein 5 [Rattus norvegicus]
Length = 1948
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 139/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R K F +K++ KFHVL+T++E+I D L W +
Sbjct: 784 SRSVIRENEFSFEDNAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 843
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 844 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 903
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 904 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 963
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 964 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 997
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 82/161 (50%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 670 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 726
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 727 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 770
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D + G
Sbjct: 771 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRGG 803
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 736 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 786
>gi|350584424|ref|XP_003126577.3| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Sus scrofa]
gi|417515864|gb|JAA53737.1| chromodomain-helicase-DNA-binding protein 4 [Sus scrofa]
Length = 1912
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|26330021|dbj|BAC28749.1| unnamed protein product [Mus musculus]
Length = 1045
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 557 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 616
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 617 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 676
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 677 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 736
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 737 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 770
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 443 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 499
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 500 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 543
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 544 PDMYVVTY 551
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 509 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 555
>gi|417413954|gb|JAA53286.1| Putative chromatin remodeling complex wstf-iswi small subunit,
partial [Desmodus rotundus]
Length = 1766
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 666 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 725
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 726 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 785
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 786 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 845
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 846 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 879
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 552 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 608
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 609 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 652
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 653 PDMYVVTY 660
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 618 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 664
>gi|402852746|ref|XP_003891074.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 isoform 1
[Papio anubis]
Length = 1954
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 786 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 845
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 846 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 905
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 906 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 965
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 966 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 999
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 672 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 728
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 729 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 772
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 773 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 805
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 738 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 788
>gi|345800756|ref|XP_546747.3| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Canis lupus
familiaris]
Length = 1986
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 823 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 882
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 883 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 942
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 943 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 1002
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 1003 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1036
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 709 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 765
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 766 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 809
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 810 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 842
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 775 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 825
>gi|392347634|ref|XP_232354.5| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Rattus
norvegicus]
Length = 1921
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 805 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 864
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 865 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 924
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 925 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 984
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 985 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1018
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 691 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 747
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 748 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 791
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 792 PDMYVVTY 799
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 757 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 803
>gi|119609183|gb|EAW88777.1| chromodomain helicase DNA binding protein 4, isoform CRA_a [Homo
sapiens]
Length = 1911
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>gi|429966391|gb|ELA48388.1| hypothetical protein VCUG_00224 [Vavraia culicis 'floridensis']
Length = 1357
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 144/213 (67%), Gaps = 19/213 (8%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ +R+++ +YE + D F VLITT+E+++S L FN+ + + DEA
Sbjct: 471 NVARDLIYDYEFY-----------NDGLLFDVLITTYEMVMSGVKHLS-FNFGVGVFDEA 518
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN + K + L L H++LLSGTPLQNN+ EL+SLL+FL+P + + F+ +
Sbjct: 519 HRLKNSHSKAFQTLISLSFNHKILLSGTPLQNNLTELWSLLHFLDPIKNESLNYFLESY- 577
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
+L+ +V++L+ LLKP+MLRR+K+DVEK I KEET+VEVELT IQK++YR I+E+N S
Sbjct: 578 KLEKSEDVDRLKTLLKPVMLRRMKDDVEK-IPIKEETIVEVELTMIQKQFYRAIIEKNLS 636
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
K + PNL+N MMELRKCCIHPYL+ G
Sbjct: 637 IFEKES-----PNLLNVMMELRKCCIHPYLVRG 664
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 79/123 (64%), Gaps = 21/123 (17%)
Query: 12 PASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNC 71
P D + + KS +KN+NTLR YQ+EGLNWL+ W+ + C
Sbjct: 372 PPKDALVINKS--FKNENTLRDYQMEGLNWLLNRWY-------------------YKQGC 410
Query: 72 ILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHAT 131
I+ADEMGLGKT+Q++ FV+ +F+TG + P L++APLST+ +W+REF+ WTDL +++YH
Sbjct: 411 IMADEMGLGKTVQTVCFVNKIFETGYQHPVLIVAPLSTLIHWEREFKTWTDLRILLYHGN 470
Query: 132 FVV 134
V
Sbjct: 471 NVA 473
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
FV+ +F+TG + P L++APLST+ +W+REF+ WTDL +++YHG
Sbjct: 427 FVNKIFETGYQHPVLIVAPLSTLIHWEREFKTWTDLRILLYHG 469
>gi|440908595|gb|ELR58598.1| Chromodomain-helicase-DNA-binding protein 5, partial [Bos grunniens
mutus]
Length = 1920
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 761 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 820
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 821 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 880
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 881 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 940
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 941 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 974
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 647 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 703
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 704 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 747
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 748 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 780
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 713 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 763
>gi|34533780|dbj|BAC86802.1| unnamed protein product [Homo sapiens]
Length = 1225
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 786 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 845
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 846 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 905
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 906 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 965
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 966 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 999
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 672 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 728
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 729 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 772
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 773 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 805
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 738 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 788
>gi|383415431|gb|AFH30929.1| chromodomain-helicase-DNA-binding protein 4 [Macaca mulatta]
Length = 1899
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 799 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 858
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 859 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 918
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 919 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 978
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 979 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1012
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 685 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 741
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 742 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 785
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 786 PDMYVVTY 793
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 751 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 797
>gi|327283577|ref|XP_003226517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Anolis
carolinensis]
Length = 1918
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 807 SRAIIRENEFSFEDNAIRGGKKASKMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 866
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 867 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 926
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 927 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 986
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 987 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1020
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 75/129 (58%), Gaps = 23/129 (17%)
Query: 4 IKKPKKKPPASDWVKLEKSPVYKN--DNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
+++P + P VK ++ P Y + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 692 LERPPETPTVDPTVKYDRQPDYLDVTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG-- 749
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW 120
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 750 -----------------LGKTVQTAVFLYSLYKEGHSKGPFLVGAPLSTIINWEREFEMW 792
Query: 121 T-DLNVIVY 128
D+ V+ Y
Sbjct: 793 APDMYVVTY 801
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 759 FLYSLYKEGHSKGPFLVGAPLSTIINWEREFEMWAPDMYVVTYVGDK 805
>gi|402852748|ref|XP_003891075.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 isoform 2
[Papio anubis]
Length = 1951
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 786 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 845
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 846 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 905
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 906 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 965
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 966 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 999
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 672 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 728
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 729 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 772
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 773 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 805
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 738 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 788
>gi|193787140|dbj|BAG52346.1| unnamed protein product [Homo sapiens]
Length = 979
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 302 SRSVIRENEFSFGDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 361
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 362 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 421
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ +L LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 422 EEFADISKEDQIKRLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 481
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 482 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 515
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 188 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 244
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 245 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 288
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 289 --------PDFYVVTYTGDKESRSVIRENEFSFGDNAIRSG 321
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 254 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 304
>gi|380787663|gb|AFE65707.1| chromodomain-helicase-DNA-binding protein 5 [Macaca mulatta]
Length = 1954
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 786 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 845
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 846 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 905
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 906 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 965
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 966 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 999
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 672 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 728
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 729 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 772
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 773 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 805
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 738 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 788
>gi|74149099|dbj|BAE32198.1| unnamed protein product [Mus musculus]
Length = 895
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 419 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 478
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 479 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 538
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 539 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 598
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 599 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 632
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 305 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 361
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 362 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 405
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 406 PDMYVVTY 413
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 371 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 417
>gi|354501163|ref|XP_003512662.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like
[Cricetulus griseus]
Length = 1977
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 139/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R K F +K++ KFHVL+T++E+I D L W +
Sbjct: 772 SRSVIRENEFSFEDNAIRGGKKVFRMKKEVQVKFHVLLTSYELITIDQAILGSIEWACLV 831
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 832 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 891
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 892 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 951
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 952 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 985
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 82/161 (50%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 658 EKPPDTPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 714
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 715 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 758
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D + G
Sbjct: 759 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRGG 791
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 724 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 774
>gi|148682990|gb|EDL14937.1| mCG131426 [Mus musculus]
Length = 1955
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 139/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R K F +K++ KFHVL+T++E+I D L W +
Sbjct: 797 SRSVIRENEFSFEDNAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 856
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 857 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 916
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 917 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 976
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 977 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1010
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 82/161 (50%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 683 EKPPDTPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 739
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 740 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 783
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D + G
Sbjct: 784 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRGG 816
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 749 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 799
>gi|338722190|ref|XP_001492263.3| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Equus
caballus]
Length = 1930
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 762 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 821
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 822 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 881
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 882 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 941
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 942 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 975
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 648 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 704
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 705 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 748
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 749 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 781
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 714 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 764
>gi|189458814|ref|NP_083492.2| chromodomain helicase DNA binding protein 5 isoform 2 [Mus musculus]
Length = 1915
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 139/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R K F +K++ KFHVL+T++E+I D L W +
Sbjct: 788 SRSVIRENEFSFEDNAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 847
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 848 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 907
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 908 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 967
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 968 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1001
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 82/161 (50%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 674 EKPPDTPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 730
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 731 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 774
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D + G
Sbjct: 775 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRGG 807
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 740 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 790
>gi|395731282|ref|XP_002811619.2| PREDICTED: chromodomain-helicase-DNA-binding protein 5, partial
[Pongo abelii]
Length = 1588
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 496 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 555
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 556 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 615
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 616 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 675
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 676 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 709
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 382 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 438
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 439 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 482
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 483 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 515
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 448 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 498
>gi|449433493|ref|XP_004134532.1| PREDICTED: uncharacterized protein LOC101204186 [Cucumis sativus]
Length = 2368
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 138/214 (64%), Gaps = 1/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ +R +++YE + + NQ K+ D +KF+VL+TT+E+++ D L+ W + ++DE
Sbjct: 883 GAKARAAIRQYE-WHASKPNQLNKKTDSFKFNVLLTTYEMVLVDASYLRGVPWEVLVVDE 941
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
HRLKN KL L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F +F
Sbjct: 942 GHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 1001
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L T +V +L+ L+ P MLRRLK+D ++I PK E +V VEL++IQ +YYR +L +N+
Sbjct: 1002 NDLTTAEKVEELKKLVSPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1061
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +++N +M+LRK C HPYL+ G
Sbjct: 1062 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG 1095
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 60/113 (53%), Gaps = 19/113 (16%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
L + P +L +QLE LNWL W+ +N ILADEMGLGKT+ + C
Sbjct: 788 LTEQPKELQGGSLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSA----CAF----- 838
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
I SL F FK R P LV+ PLST+PNW EF W +LNV+ YH
Sbjct: 839 ----ISSLYF---EFKA--RLPCLVLVPLSTMPNWLSEFGLWAPNLNVVEYHG 882
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
F F+ R P LV+ PLST+PNW EF W +LNV+ YHG K
Sbjct: 838 FISSLYFEFKARLPCLVLVPLSTMPNWLSEFGLWAPNLNVVEYHGGAK 885
>gi|193785938|dbj|BAG54725.1| unnamed protein product [Homo sapiens]
Length = 1886
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 786 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 845
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 846 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 905
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ + E +V VEL+ +QKKYY+ IL
Sbjct: 906 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSRTELIVRVELSPMQKKYYKYILT 965
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 966 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 999
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 672 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDAILADEMG--- 728
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 729 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 772
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 773 PDMYVVTY 780
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 738 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 784
>gi|224125208|ref|XP_002329920.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222871157|gb|EEF08288.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 2332
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 139/213 (65%), Gaps = 1/213 (0%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ +R M++ YE + +D N+ K+ YKF+VL+TT+E++++D L+ W + ++DE
Sbjct: 831 AKARAMIRLYE-WHASDPNKMNKKTTSYKFNVLLTTYEMVLADSTYLRGVPWEVLVVDEG 889
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN KL L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F +F
Sbjct: 890 HRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLTSFEEKFN 949
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
L T +V +L+ L+ P MLRRLK+D ++I PK E +V VEL++IQ +YYR +L +N+
Sbjct: 950 DLTTAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1009
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +++N +M+LRK C HPYL+ G
Sbjct: 1010 MLRNIGKGVAQQSMLNIVMQLRKICNHPYLIPG 1042
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 56/102 (54%), Gaps = 19/102 (18%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
+L +QLE LNWL W +N ILADEMGLGKT+ + C + SL F
Sbjct: 746 SLFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSA----CAF---------LSSLYF- 791
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
FK + P LV+ PLST+PNW EF W +LNV+ YH
Sbjct: 792 --EFKASL--PCLVLVPLSTMPNWFSEFALWAPNLNVVEYHG 829
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 162 PFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
P LV+ PLST+PNW EF W +LNV+ YHG
Sbjct: 798 PCLVLVPLSTMPNWFSEFALWAPNLNVVEYHG 829
>gi|449490665|ref|XP_004158671.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101228553,
partial [Cucumis sativus]
Length = 1851
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 138/214 (64%), Gaps = 1/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ +R +++YE + + NQ K+ D +KF+VL+TT+E+++ D L+ W + ++DE
Sbjct: 883 GAKARAAIRQYE-WHASKPNQLNKKTDSFKFNVLLTTYEMVLVDASYLRGVPWEVLVVDE 941
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
HRLKN KL L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F +F
Sbjct: 942 GHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 1001
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L T +V +L+ L+ P MLRRLK+D ++I PK E +V VEL++IQ +YYR +L +N+
Sbjct: 1002 NDLTTAEKVEELKKLVSPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1061
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +++N +M+LRK C HPYL+ G
Sbjct: 1062 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG 1095
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 60/113 (53%), Gaps = 19/113 (16%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
L + P +L +QLE LNWL W+ +N ILADEMGLGKT+ + C
Sbjct: 788 LTEQPKELQGGSLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSA----CAF----- 838
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
I SL F FK R P LV+ PLST+PNW EF W +LNV+ YH
Sbjct: 839 ----ISSLYF---EFKA--RLPCLVLVPLSTMPNWLSEFGLWAPNLNVVEYHG 882
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
F F+ R P LV+ PLST+PNW EF W +LNV+ YHG K
Sbjct: 838 FISSLYFEFKARLPCLVLVPLSTMPNWLSEFGLWAPNLNVVEYHGGAK 885
>gi|260812970|ref|XP_002601193.1| hypothetical protein BRAFLDRAFT_183803 [Branchiostoma floridae]
gi|229286484|gb|EEN57205.1| hypothetical protein BRAFLDRAFT_183803 [Branchiostoma floridae]
Length = 964
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 140/215 (65%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E+E F +D K Q IK+ KFHVL+T++E+I D L+ +W + +
Sbjct: 343 SRSVIREHEFCFDDDAVKGGKKAQRIKKDSQVKFHVLLTSYELISIDVATLQSIDWSVLV 402
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L + +++LL+GTPLQNN+ ELF LLNFL ++F+N + F+
Sbjct: 403 VDEAHRLKNNQSKFFRILNGYKIAYKLLLTGTPLQNNLEELFHLLNFLCSERFNNLQEFL 462
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + + +++KL +L P +LRRLK DV K I K E +V VEL +QKKYY+ IL
Sbjct: 463 EEFQDMSKDEKISKLHDMLGPHLLRRLKADVLKGIPAKSEFIVRVELAPMQKKYYKWILT 522
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ + +V +L+N MM+L+KCC HPYL
Sbjct: 523 RNFEALNTKGSGHHV-SLLNVMMDLKKCCNHPYLF 556
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/115 (47%), Positives = 71/115 (61%), Gaps = 23/115 (20%)
Query: 18 KLEKSPVYKND--NTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
K +K P + +D TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 242 KYDKQPEFIDDTGGTLHPYQLEGLNWLRFSWSQGTDTILADEMG---------------- 285
Query: 76 EMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
LGKTIQ++ F++++F+ G +GPFL+ APLSTI NW+REFE W D+ V+ Y
Sbjct: 286 ---LGKTIQTICFLNSLFQEGHSKGPFLISAPLSTIINWEREFEFWAPDMYVVTY 337
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Query: 139 GSKFFRICLEFFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
G IC F++++F+ G +GPFL+ APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 287 GKTIQTIC---FLNSLFQEGHSKGPFLISAPLSTIINWEREFEFWAPDMYVVTYCGDKDS 343
Query: 197 LS 198
S
Sbjct: 344 RS 345
>gi|149024737|gb|EDL81234.1| rCG30890, isoform CRA_a [Rattus norvegicus]
Length = 1668
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 139/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R K F +K++ KFHVL+T++E+I D L W +
Sbjct: 512 SRSVIRENEFSFEDNAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 571
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 572 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 631
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 632 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 691
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 692 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 725
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 82/161 (50%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 398 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 454
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 455 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 498
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D + G
Sbjct: 499 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRGG 531
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 464 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 514
>gi|344256322|gb|EGW12426.1| Chromodomain-helicase-DNA-binding protein 5 [Cricetulus griseus]
Length = 999
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 139/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R K F +K++ KFHVL+T++E+I D L W +
Sbjct: 766 SRSVIRENEFSFEDNAIRGGKKVFRMKKEVQVKFHVLLTSYELITIDQAILGSIEWACLV 825
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 826 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 885
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 886 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 945
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 946 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 979
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 72/128 (56%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 652 EKPPDTPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 708
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 709 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 752
Query: 122 -DLNVIVY 128
D V+ Y
Sbjct: 753 PDFYVVTY 760
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 718 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 768
>gi|449683391|ref|XP_002153791.2| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Hydra
magnipapillata]
Length = 1699
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 141/216 (65%), Gaps = 8/216 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
+R +++ YE+ F +D K +K+ + KFHVL+T++E++ D L+ +W++ +
Sbjct: 580 NRQVIRNYEMTFDDDSMRKGQKAYKVKKDVICKFHVLLTSYELVAIDANTLQSIDWKVLV 639
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
IDEAHRLKN + + ++++ +LL+GTPLQNN+ ELF LLNFL P +F N E F+
Sbjct: 640 IDEAHRLKNNQSRFFRTMTSYNIDYTLLLTGTPLQNNLEELFHLLNFLCPDKFQNRENFL 699
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
+EF + E ++ KL +L P MLRRLK DV K + K E +V VEL+ +QKKYY+ IL
Sbjct: 700 AEFEDIAKEDQIKKLHEMLGPHMLRRLKGDVLKDMPSKSEFIVRVELSPMQKKYYKYILT 759
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+NF L+ T + +L+N +MEL+KCC HPYL +
Sbjct: 760 KNFGALN--TRGSQQVSLLNIVMELKKCCNHPYLFS 793
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 61/100 (61%), Gaps = 21/100 (21%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
L YQ+EG+NW+ +SW + N ILADEMGLGKTIQ++TF++
Sbjct: 494 LHEYQIEGINWIRYSW-------------------AQRDNTILADEMGLGKTIQTITFLN 534
Query: 91 AVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
++ G GPFL+ APLSTI NW+REFE W ++ V+ Y
Sbjct: 535 SLLSEGRSEGPFLICAPLSTIVNWEREFEFWAPNMYVVTY 574
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
F++++ G GPFL+ APLSTI NW+REFE W ++ V+ Y G R+
Sbjct: 532 FLNSLLSEGRSEGPFLICAPLSTIVNWEREFEFWAPNMYVVTYSGNRE 579
>gi|292622418|ref|XP_685699.4| PREDICTED: chromodomain-helicase-DNA-binding protein 4 isoform 1
[Danio rerio]
Length = 1953
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W +
Sbjct: 822 SRAVIRENEFTFEDNAIRGGKKASKMKKEAAVKFHVLLTSYELITIDQAILGSIDWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNNYPLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K + K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 1002 RNFEALNT-RGGGNQVSLLNVVMDLKKCCNHPYLF 1035
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 72/129 (55%), Gaps = 23/129 (17%)
Query: 4 IKKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
++P P +K ++ P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 707 TERPPANPVVDPTIKFDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG-- 764
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW 120
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 765 -----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMW 807
Query: 121 T-DLNVIVY 128
D+ V+ Y
Sbjct: 808 APDMYVVTY 816
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 774 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 820
>gi|332265298|ref|XP_003281663.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Nomascus
leucogenys]
Length = 2435
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I + L W +
Sbjct: 1257 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIEQAILGSIEWACLV 1316
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 1317 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 1376
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 1377 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 1436
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 1437 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1470
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 82/160 (51%), Gaps = 34/160 (21%)
Query: 6 KPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKT 63
KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 1144 KPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG---- 1199
Query: 64 IQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTD 122
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 1200 ---------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA- 1243
Query: 123 LNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 1244 -------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 1276
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 1209 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 1259
>gi|148227774|ref|NP_001080504.1| chromodomain helicase DNA binding protein 4 [Xenopus laevis]
gi|28422180|gb|AAH46866.1| B230399n07 protein [Xenopus laevis]
Length = 1893
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F + K +K++ KFHVL+T++E+I D L +W +
Sbjct: 803 SRAVIRENEFSFEGNAIRGGKKASRMKKEASVKFHVLLTSYELITIDTAVLGSIDWACLV 862
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 863 VDEAHRLKNNQSKFFRVLNGYPLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 922
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 923 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKFILT 982
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 983 RNFEALNT-RGGGNQVSLLNVVMDLKKCCNHPYLF 1016
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 71/127 (55%), Gaps = 23/127 (18%)
Query: 6 KPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKT 63
+P P VK ++ P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 690 RPPDTPAVDPTVKYDRQPDYLDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG---- 745
Query: 64 IQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT- 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 746 ---------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAP 790
Query: 122 DLNVIVY 128
D+ V+ Y
Sbjct: 791 DMYVVTY 797
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 755 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 801
>gi|307136401|gb|ADN34210.1| chromatin remodeling complex subunit [Cucumis melo subsp. melo]
Length = 2374
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 137/214 (64%), Gaps = 1/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ +R +++YE N +Q K+ D +KF+VL+TT+E+++ D L+ W + ++DE
Sbjct: 887 GAKARAAIRQYEWHASN-PSQLNKKTDSFKFNVLLTTYEMVLVDASYLRGVPWEVLVVDE 945
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
HRLKN KL L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F +F
Sbjct: 946 GHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKF 1005
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L T +V +L+ L+ P MLRRLK+D ++I PK E +V VEL++IQ +YYR +L +N+
Sbjct: 1006 NDLTTAEKVEELKKLVSPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNY 1065
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +++N +M+LRK C HPYL+ G
Sbjct: 1066 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG 1099
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 60/113 (53%), Gaps = 19/113 (16%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
L + P +L +QLE LNWL W+ +N ILADEMGLGKT+ + C
Sbjct: 792 LTEQPKELQGGSLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSA----CAF----- 842
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
I SL F FK R P LV+ PLST+PNW EF W +LNV+ YH
Sbjct: 843 ----ISSLYF---EFKA--RLPCLVLVPLSTMPNWLSEFALWAPNLNVVEYHG 886
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
F F+ R P LV+ PLST+PNW EF W +LNV+ YHG K
Sbjct: 842 FISSLYFEFKARLPCLVLVPLSTMPNWLSEFALWAPNLNVVEYHGGAK 889
>gi|47211690|emb|CAF91815.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1369
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 137/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K+ KFHVL+T++E+I D L NW +
Sbjct: 653 SRAVIRENEFSFEDNAIRGGKKASRMKKDTSIKFHVLLTSYELITIDMAVLGSVNWACLV 712
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++FS E F+
Sbjct: 713 VDEAHRLKNNQSKFFRVLNNYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFSKLEIFL 772
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K + K E +V VEL+++QKKYY+ IL
Sbjct: 773 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSSMQKKYYKFILT 832
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+NF L +KG N +L+N +M+L+KCC HPYL
Sbjct: 833 KNFEALNTKG--GGNQVSLLNVVMDLKKCCNHPYLF 866
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 72/127 (56%), Gaps = 23/127 (18%)
Query: 6 KPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKT 63
+P + P +K E+ P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 540 RPPENPVVDPTIKFERQPEYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG---- 595
Query: 64 IQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT- 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 596 ---------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAP 640
Query: 122 DLNVIVY 128
D+ V+ Y
Sbjct: 641 DMYVVTY 647
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 605 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 651
>gi|327289025|ref|XP_003229225.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Anolis
carolinensis]
Length = 2037
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 137/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFF-----RNDKNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F R K F IK++ KFHVL+T++E+I D L W +
Sbjct: 796 SRAVIRENEFSFEDNAIRGGKKVFRIKKEAQIKFHVLLTSYELITIDQAILGSIEWACLV 855
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 856 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 915
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 916 EEFADISKEDQIKKLHDVLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKLILT 975
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ + V +L+N MM+L+KCC HPYL
Sbjct: 976 RNFEALNSKGGGSQV-SLLNIMMDLKKCCNHPYLF 1009
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 86/162 (53%), Gaps = 34/162 (20%)
Query: 4 IKKPKKKPPASDWVKLEKSPVYKN--DNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
+++P + P VK +K P Y N TL +YQLEGLNWL FSW G + ILADEMG
Sbjct: 681 VERPPETPLVDPTVKFDKQPWYINTTGGTLHSYQLEGLNWLRFSWAQGTDTILADEMG-- 738
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW 120
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 739 -----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMW 781
Query: 121 TDLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D + G
Sbjct: 782 A--------PEFYVVTYTGDKESRAVIRENEFSFEDNAIRGG 815
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
F+ +++K G +GP+LV APLSTI NW+REFE W + V+ Y G ++
Sbjct: 748 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPEFYVVTYTGDKE 795
>gi|219120207|ref|XP_002180847.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407563|gb|EEC47499.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 495
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 143/219 (65%), Gaps = 12/219 (5%)
Query: 294 SASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISD-CLELKDFNWRLCII 352
+ R +++E E + +D+ + V+ITT E+I++D +EL +W I+
Sbjct: 108 GSGDDRRLIRELEFAYEDDRPK--------NTVVVITTPEMIVADDFVELTAVDWDAVIV 159
Query: 353 DEAHRLKNRNCKLLEGLR--LLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAF 410
DEAHRLKN N KL LR +H +LL+GTP+QN+V E ++LLNF++P F + + F
Sbjct: 160 DEAHRLKNHNSKLAINLRDNRFKFDHIILLTGTPIQNDVQEFWTLLNFIDPNGFDDVDKF 219
Query: 411 MSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGIL 470
M+++G +K++ V++L ++P +LRRLKEDVEKS+ PKEET++EVELT QK+YYR +
Sbjct: 220 MTKYGDMKSKERVDELHEEIRPFILRRLKEDVEKSVPPKEETLIEVELTLSQKQYYRALY 279
Query: 471 ERNFSFLSKGTTSA-NVPNLMNTMMELRKCCIHPYLLNG 508
E+N FL K A + P+L N M+LRKCC H +LL G
Sbjct: 280 EKNVKFLHKNNKKALDGPSLNNLAMQLRKCCNHVFLLKG 318
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 18/108 (16%)
Query: 24 VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTI 83
VYKN +R YQ EG++W++ ++ N R+ ILADEMGLGKT+Q++ I+A +
Sbjct: 20 VYKNGGQVRDYQAEGISWMLSNYVNQRSSILADEMGLGKTLQTVGTVNIMATRLNGN--- 76
Query: 84 QSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHAT 131
G FLVIAPLST+ +W+REF+ WTDLN IVYH +
Sbjct: 77 ---------------GVFLVIAPLSTLSHWEREFKRWTDLNTIVYHGS 109
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 6/63 (9%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLR-LKYVAADYVPKDG 219
G FLVIAPLST+ +W+REF+ WTDLN IVYHG S D+ +R L++ D PK+
Sbjct: 77 GVFLVIAPLSTLSHWEREFKRWTDLNTIVYHG-----SGDDRRLIRELEFAYEDDRPKNT 131
Query: 220 EVL 222
V+
Sbjct: 132 VVV 134
>gi|348523828|ref|XP_003449425.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Oreochromis
niloticus]
Length = 2125
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F + K F ++ + KFHVL+T++E++ D LK +W +
Sbjct: 837 SRAIIRENEFSFDDTAVKGGKKAFKLRREAPIKFHVLLTSYELVTIDQTALKSIDWACLV 896
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P +F+N E F+
Sbjct: 897 VDEAHRLKNNQSKFFRRLNDYKIDYKLLLTGTPLQNNLEELFHLLNFLTPNRFNNLEGFL 956
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 957 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKLILT 1016
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+NF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 1017 KNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1050
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 79/152 (51%), Gaps = 34/152 (22%)
Query: 17 VKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
+K E+ P V TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 735 IKYEEQPDFVTSTGGTLHLYQLEGLNWLRFSWAQGTDTILADEMG--------------- 779
Query: 75 DEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFV 133
LGKTIQ++ F+ ++FK G +GPFLV APLSTI NW+REFE W F
Sbjct: 780 ----LGKTIQTIVFLYSLFKEGHTKGPFLVSAPLSTIINWEREFEMWA--------PDFY 827
Query: 134 VLLQTGSKFFRICL---EF-FVDAVFKTGIRG 161
V+ TG K R + EF F D K G +
Sbjct: 828 VVTYTGDKDSRAIIRENEFSFDDTAVKGGKKA 859
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ ++FK G +GPFLV APLSTI NW+REFE W D V+ Y G +
Sbjct: 789 FLYSLFKEGHTKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDK 835
>gi|255565329|ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
communis]
gi|223537108|gb|EEF38742.1| chromodomain helicase DNA binding protein, putative [Ricinus
communis]
Length = 2257
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 139/213 (65%), Gaps = 1/213 (0%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ +R ++++YE + +D + ++ YKF+VL+TT+E++++D L+ W + ++DE
Sbjct: 755 AKARAIIRQYE-WHASDPKKTNQKTASYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEG 813
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN KL L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F +F
Sbjct: 814 HRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLSSFEEKFN 873
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
L T +V +L+ L+ P MLRRLK+D ++I PK E +V VELT+IQ +YYR +L +N+
Sbjct: 874 DLTTAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQ 933
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +++N +M+LRK C HPYL+ G
Sbjct: 934 ILRNIGKGVPQQSMLNIVMQLRKICNHPYLIPG 966
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 59/113 (52%), Gaps = 19/113 (16%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
L + P +L +QLE LNWL W +N ILADEMGLGKT+ + C
Sbjct: 659 LTEQPKELKGGSLFPHQLEALNWLRRCWHKSKNVILADEMGLGKTVSA----CAF----- 709
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
+ SL F F+ + P LV+ PLST+PNW EF W +LNV+ YH
Sbjct: 710 ----LSSLYF---EFRASL--PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 753
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 162 PFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
P LV+ PLST+PNW EF W +LNV+ YHG
Sbjct: 722 PCLVLVPLSTMPNWLAEFALWAPNLNVVEYHG 753
>gi|161611630|gb|AAI55800.1| Wu:fd12d03 protein [Danio rerio]
Length = 1074
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W +
Sbjct: 822 SRAVIRENEFTFEDNAIRGGKKASKMKKEAAVKFHVLLTSYELITIDQAILGSIDWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNNYPLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K + K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 1002 RNFEALNT-RGGGNQVSLLNVVMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 72/129 (55%), Gaps = 23/129 (17%)
Query: 4 IKKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
++P P +K ++ P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 707 TERPPANPVVDPTIKFDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG-- 764
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW 120
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 765 -----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMW 807
Query: 121 T-DLNVIVY 128
D+ V+ Y
Sbjct: 808 APDMYVVTY 816
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 774 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 820
>gi|281346162|gb|EFB21746.1| hypothetical protein PANDA_013140 [Ailuropoda melanoleuca]
Length = 1814
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 142/216 (65%), Gaps = 12/216 (5%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 656 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 715
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K+L ++ ++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 716 VDEAHRLKNNQPKVLNSYKI---DYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 772
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 773 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 832
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 833 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 866
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 542 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 598
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 599 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 642
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 643 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 675
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 608 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 658
>gi|123454531|ref|XP_001315018.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
gi|121897682|gb|EAY02795.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
Length = 1656
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 139/211 (65%), Gaps = 21/211 (9%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+R ML+EYE F++++ Q KF + +T++E++ D EL+ F + ++DEAHR
Sbjct: 301 AREMLREYE-FYKSNSEQV-------KFDIFLTSYEVLYKDVDELRHFKFPAFVVDEAHR 352
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+N K+L ++ L RVLL+GTPLQN++ EL SLL FL P +FS+ M
Sbjct: 353 LKNKNSKILSAIQHLKTSFRVLLTGTPLQNSIEELQSLLEFLHPGEFSDLNNDMD----- 407
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
++ KL++ L+P +LRRLK D ++SIAPKEET++E +T QK++YR ILE+N SFL
Sbjct: 408 --AQDIQKLRVRLQPHLLRRLKVDTDQSIAPKEETIIECTMTKYQKQFYRAILEQNSSFL 465
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
S GT NL+N M+LRK CIHP+L+ G
Sbjct: 466 SGGT------NLLNIAMDLRKVCIHPFLIKG 490
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 76/121 (62%), Gaps = 20/121 (16%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
KKP S + +E +P YKN L YQLEG+NWL+ +W++ NCILADEMG
Sbjct: 194 KKPSKSQFKPIEGNPTYKNGLQLFNYQLEGVNWLLKNWYSDINCILADEMG--------- 244
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIV 127
LGKTIQ++ F + + + + GP++VIAPL+T+P+WQR+ E+WTDL VI
Sbjct: 245 ----------LGKTIQAVAFFERIHRVEKLPGPYMVIAPLATLPHWQRQIESWTDLYVIR 294
Query: 128 Y 128
Y
Sbjct: 295 Y 295
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 30/35 (85%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRK 195
GP++VIAPL+T+P+WQR+ E+WTDL VI Y G R+
Sbjct: 266 GPYMVIAPLATLPHWQRQIESWTDLYVIRYTGNRQ 300
>gi|356510796|ref|XP_003524120.1| PREDICTED: uncharacterized protein LOC100793933 [Glycine max]
Length = 2325
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 140/213 (65%), Gaps = 1/213 (0%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ +R ++++YE + N+ + K+ + YKF+VL+TT+E++++D L+ W + ++DE
Sbjct: 827 AKARAIIRQYE-WHANNPSGLNKKTEAYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEG 885
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN KL L +HRVLL+GTPLQNN+ E+++LLNFL+P F + F +F
Sbjct: 886 HRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLSLFEEKFN 945
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
L T +V++L+ L+ P MLRRLK+D ++I PK E +V VEL++IQ +YYR +L +N+
Sbjct: 946 DLTTAEKVDELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 1005
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +++N +M+LRK C HPYL+ G
Sbjct: 1006 VLRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG 1038
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 62/117 (52%), Gaps = 19/117 (16%)
Query: 15 DWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
D L + P +L +QLE LNWL W+ +N ILADEMGLGKT+ + C
Sbjct: 727 DIFNLTEQPEDLKGGSLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSA----CAF- 781
Query: 75 DEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
I SL F FK + P LV+ PLST+PNW EFE W ++NV+ YH
Sbjct: 782 --------ISSLYF---EFKVSL--PCLVLVPLSTMPNWLAEFELWAPNVNVVEYHG 825
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F F+ + P LV+ PLST+PNW EFE W ++NV+ YHG
Sbjct: 781 FISSLYFEFKVSLPCLVLVPLSTMPNWLAEFELWAPNVNVVEYHG 825
>gi|410905767|ref|XP_003966363.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Takifugu
rubripes]
Length = 1967
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 133/215 (61%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F + K +K+ KFHVL+T++E+I D L W +
Sbjct: 832 SRAVIRENEFSFEGNAIRGGKKASKMKKDSTVKFHVLLTSYELITIDQAVLGSIEWACLV 891
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 892 VDEAHRLKNNQSKFFRVLNNYQLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 951
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K + K E +V VEL+ +QKKYY+ IL
Sbjct: 952 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKFILT 1011
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 1012 RNFEALNT-RGGGNQVSLLNVVMDLKKCCNHPYLF 1045
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 71/128 (55%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P P +K ++ P Y TL YQLEGLNWL FSW + ILADEMG
Sbjct: 718 ERPPANPVVDPTIKFDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQATDTILADEMG--- 774
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 775 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 818
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 819 PDMYVVTY 826
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 98 RGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVVLLQTGSKFFRICLEFFVDAVFKT 157
R P + + T+ +Q E W L AT +L + F+ +++K
Sbjct: 734 RQPDYLDSTGGTLHPYQLEGLNW--LRFSWAQATDTILADEMGLGKTVQTAVFLYSLYKE 791
Query: 158 G-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 792 GHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 830
>gi|356507366|ref|XP_003522438.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like
[Glycine max]
Length = 1441
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 145/224 (64%), Gaps = 12/224 (5%)
Query: 295 ASASRNMLQEYELFF--------RNDKNQFIKE--KDLYKFHVLITTFEIIISDCLELKD 344
++ +RN+++EYE +F + I E +D KF VL+T++E+I D LK
Sbjct: 367 SAQARNVIREYEFYFPKKLKKIKKKKSGHLISESKQDRIKFDVLLTSYEMINFDTTSLKP 426
Query: 345 FNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQF 404
W I+DE HRLKN++ KL L+ +HRVLL+GTPLQNN++ELF L++FL+ +F
Sbjct: 427 IKWECMIVDEGHRLKNKDSKLFSSLKQYSSKHRVLLTGTPLQNNLDELFMLMHFLDAGKF 486
Query: 405 SNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKK 464
+ E F EF + E ++++L +L P +LRR+K+DV K + PK+E ++ +EL++ QK+
Sbjct: 487 GSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRIELSSKQKE 546
Query: 465 YYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
YY+ IL RN+ L++ A + +L+N +MELRK C HPY+L G
Sbjct: 547 YYKAILTRNYQILTR-RGGAQI-SLINVVMELRKLCCHPYMLEG 588
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 67/110 (60%), Gaps = 21/110 (19%)
Query: 20 EKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGL 79
E+SP + + TL YQLEGLN+L FSW + ILADEMGL
Sbjct: 275 EQSPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGL------------------- 315
Query: 80 GKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GKTIQS+ F+ ++FK G+ P LV+APLST+ NW+REF W +NV++Y
Sbjct: 316 GKTIQSIAFLASLFKEGV-SPHLVVAPLSTLRNWEREFATWAPQMNVLMY 364
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++FK G+ P LV+APLST+ NW+REF W +NV++Y G
Sbjct: 324 FLASLFKEGV-SPHLVVAPLSTLRNWEREFATWAPQMNVLMYVG 366
>gi|339242107|ref|XP_003376979.1| domain protein, SNF2 family [Trichinella spiralis]
gi|316974280|gb|EFV57776.1| domain protein, SNF2 family [Trichinella spiralis]
Length = 2137
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 132/215 (61%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFF------RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E+E F K ++ + KFH L+T++E+I D L +W + +
Sbjct: 821 SRAVIREHEFSFVEGAVKGGPKPGKLRTGEGIKFHALLTSYELISIDHTTLGSIDWAMLV 880
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K LR L +VLL+GTPLQNN+ ELF LLNFL P++F + E F
Sbjct: 881 VDEAHRLKNNQSKFFRTLRDFKLNFKVLLTGTPLQNNLEELFHLLNFLSPERFCDMELFT 940
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K + K E +V VEL+ IQKKYY+ +L
Sbjct: 941 QEFTDISKEEQIAKLHSLLGPHMLRRLKSDVLKGMPAKSELIVRVELSTIQKKYYKYVLT 1000
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+NF L+ + V +L+N MM+L+KCC HPYL
Sbjct: 1001 KNFDALNTRCGGSQV-SLLNIMMDLKKCCNHPYLF 1034
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 82/157 (52%), Gaps = 24/157 (15%)
Query: 12 PASDWVK-LEKSPVYKND--NTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
P++D K +EK P Y + L YQL GLN+L +SW + ILADEMGLGKTIQ++
Sbjct: 698 PSTDLKKKIEKQPDYITECGGNLHDYQLAGLNFLRYSWATSVDAILADEMGLGKTIQTIV 757
Query: 69 RNCILADEM---GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV 125
L E+ G+ + + + + +GPFL+ APLSTI NW+REFE W
Sbjct: 758 FLYSLYKEVREKGIEQQLLNNPY------GHCKGPFLISAPLSTIINWEREFEFWA---- 807
Query: 126 IVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ G K R + EF FV+ K G
Sbjct: 808 ----PDFYVVTYIGDKDSRAVIREHEFSFVEGAVKGG 840
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 160 RGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKD 218
+GPFL+ APLSTI NW+REFE W D V+ Y G + + + A PK
Sbjct: 784 KGPFLISAPLSTIINWEREFEFWAPDFYVVTYIGDKDSRAVIREHEFSFVEGAVKGGPKP 843
Query: 219 GEVLYG 224
G++ G
Sbjct: 844 GKLRTG 849
>gi|432883650|ref|XP_004074311.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Oryzias
latipes]
Length = 1974
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 137/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ + +K+ KFHVL+T++E+I D L +W +
Sbjct: 822 SRAVIRENEFSFEDNAIRGGKRASRMKKDSSIKFHVLLTSYELITIDMAALGSIDWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNNYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEVFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K + K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKFILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+NF L +KG N +L+N +M+L+KCC HPYL
Sbjct: 1002 KNFEALNTKG--GGNQVSLLNVVMDLKKCCNHPYLF 1035
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 77/132 (58%), Gaps = 26/132 (19%)
Query: 4 IKKPKKKP--PASD-WVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEM 58
+K+P++ P P D +K E+ P Y TL YQLEGLNWL FSW G + ILADEM
Sbjct: 704 VKRPERPPENPVVDPTIKFERQPDYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEM 763
Query: 59 GLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREF 117
G LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REF
Sbjct: 764 G-------------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREF 804
Query: 118 EAWT-DLNVIVY 128
E W D+ V+ Y
Sbjct: 805 EMWAPDMYVVTY 816
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 774 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYIGDK 820
>gi|348526369|ref|XP_003450692.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like
[Oreochromis niloticus]
Length = 1972
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 134/215 (62%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F + K +K+ KFHVL+T++E+I D L W +
Sbjct: 833 SRAVIRENEFSFEGNAIRGGKKASKMKKDSPVKFHVLLTSYELITIDQAVLGSIEWACLV 892
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 893 VDEAHRLKNNQSKFFRVLNNYPLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 952
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K + K E +V VEL+++QKKYY+ IL
Sbjct: 953 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSSMQKKYYKFILT 1012
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 1013 RNFEALNT-RGGGNQVSLLNVVMDLKKCCNHPYLF 1046
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 71/128 (55%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P P +K ++ P Y TL YQLEGLNWL FSW + ILADEMG
Sbjct: 719 ERPPANPVVDPTIKFDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQATDTILADEMG--- 775
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 776 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 819
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 820 PDMYVVTY 827
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 785 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYIGDK 831
>gi|308799669|ref|XP_003074615.1| Chromodomain-helicase-DNA-binding protein 6 (ISS) [Ostreococcus
tauri]
gi|116000786|emb|CAL50466.1| Chromodomain-helicase-DNA-binding protein 6 (ISS) [Ostreococcus
tauri]
Length = 1390
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 121/186 (65%), Gaps = 1/186 (0%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
K +++TT+E + +D W ++DEAHRLK KL L L +E LL+GT
Sbjct: 416 KADIVLTTYETVTADRQSFAKVKWCTMVVDEAHRLKRIGGKLGNDLGTLSVERICLLTGT 475
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVE 443
PLQNN EL+SLLNF++ + FS+ E F + FG + S+V +LQ +L P +LRRLK DVE
Sbjct: 476 PLQNNTAELWSLLNFVDSKHFSDAEDFEAAFGGMVKASQVERLQQVLGPYLLRRLKSDVE 535
Query: 444 KSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSA-NVPNLMNTMMELRKCCIH 502
+ + P+ ET+VE EL +QKK YR + ERNFSFL +G S N N N MME+RKCC H
Sbjct: 536 QKLPPRSETLVECELAPLQKKCYRALFERNFSFLRQGCESKENFANFANIMMEVRKCCQH 595
Query: 503 PYLLNG 508
P+LL+G
Sbjct: 596 PFLLDG 601
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 58/120 (48%), Gaps = 23/120 (19%)
Query: 25 YKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQ 84
Y + LR+YQ EG+ W+ F++ GR CILAD EMGLGKT Q
Sbjct: 300 YGESSELRSYQKEGVKWMSFNFRAGRGCILAD-------------------EMGLGKTAQ 340
Query: 85 SLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVVLLQTGSKFFR 144
SL + K P L++ PLST+ NW+RE + W +V H + Q G F R
Sbjct: 341 SLALIHHCLKVRPGLPALIVVPLSTVVNWEREAKRWVPDAYLVTH----IGKQAGRDFAR 396
>gi|255089631|ref|XP_002506737.1| SNF2 super family [Micromonas sp. RCC299]
gi|226522010|gb|ACO67995.1| SNF2 super family [Micromonas sp. RCC299]
Length = 1587
Score = 182 bits (462), Expect = 3e-43, Method: Composition-based stats.
Identities = 90/190 (47%), Positives = 124/190 (65%), Gaps = 2/190 (1%)
Query: 321 DLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRV-L 379
D+Y+ V++TT+E++ +D L W +IDEAHRLKN K LR L RV L
Sbjct: 515 DVYRADVVLTTYEMVQADRSALAKIPWSCLVIDEAHRLKNSGGKAQRDLRTLDFAKRVVL 574
Query: 380 LSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLK 439
L+GTPLQN+ EL+SLLNF++ +F++ + F S FG + +V L +L P +LRRLK
Sbjct: 575 LTGTPLQNDTAELWSLLNFVDAGRFASKDEFESAFGAMTAARQVETLHKVLAPYLLRRLK 634
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSAN-VPNLMNTMMELRK 498
+DVE + P+ ET+VE EL +QKK YR + ERNFSFL +G+ + N N MME+RK
Sbjct: 635 QDVEHKLPPRVETLVECELMPLQKKCYRALFERNFSFLRQGSKDDRALANFSNLMMEVRK 694
Query: 499 CCIHPYLLNG 508
CC HP+LL+G
Sbjct: 695 CCQHPFLLDG 704
Score = 75.1 bits (183), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 56/115 (48%), Gaps = 31/115 (26%)
Query: 12 PASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNC 71
P+ +W E + LR YQ EG+ W+ N ++ + R C
Sbjct: 360 PSREWYGSE-------GDVLRGYQKEGVRWM------AHNLVVRE------------RGC 394
Query: 72 ILADEMGLGKTIQSLTFVDAVFKTG------IRGPFLVIAPLSTIPNWQREFEAW 120
ILADEMGLGKT QSL +D V + RGP LV+ PLST+ NW+RE W
Sbjct: 395 ILADEMGLGKTAQSLALIDYVLRAQRASRLETRGPALVVVPLSTLVNWEREAARW 449
>gi|432909970|ref|XP_004078255.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like
[Oryzias latipes]
Length = 1882
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 133/215 (61%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F + K +K+ KFHVL+T++E+I D L W +
Sbjct: 749 SRAVIRENEFSFEGNAIRGGKKASKMKKDSPVKFHVLLTSYELITIDQAVLGSIEWACLV 808
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 809 VDEAHRLKNNQSKFFRLLNNYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 868
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K + K E +V VEL+ +QKKYY+ IL
Sbjct: 869 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKFILT 928
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 929 RNFEALNT-RGGGNQVSLLNVVMDLKKCCNHPYLF 962
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 71/128 (55%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P P +K ++ P Y TL YQLEGLNWL FSW + ILADEMG
Sbjct: 635 ERPPANPIVDPTIKFDRQPEYLDSTGGTLHPYQLEGLNWLRFSWAQATDTILADEMG--- 691
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 692 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 735
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 736 PDMYVVTY 743
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 701 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 747
>gi|320164200|gb|EFW41099.1| chromodomain helicase DNA binding protein 2 [Capsaspora owczarzaki
ATCC 30864]
Length = 1939
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 142/211 (67%), Gaps = 11/211 (5%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ASR ++++YEL K KF+V+ITT+E ++SD L F W ++DEA
Sbjct: 684 AASRKIIRDYELLDSTGKRP--------KFNVMITTYETVLSDEAYLARFKWTNLMVDEA 735
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN + +L + L H HR+L++GTPLQN++ EL++LL+FL P +F++ + F+ ++
Sbjct: 736 HRLKNVSSRLHQALAGFHTNHRLLVTGTPLQNDLRELWALLHFLTPDRFTSCDDFIEQYS 795
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
L ES +NKL LL+P +LRR+K+DVEKS+ K E ++ V+++++QK+YY+ IL +N++
Sbjct: 796 NL--ESNINKLHALLQPFLLRRVKKDVEKSLPAKVERILRVDMSSLQKQYYKWILTKNYT 853
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
L KG N +N M+EL+KCC HP L+
Sbjct: 854 MLRKG-RRGNAGGFINIMIELKKCCNHPNLI 883
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 69/123 (56%), Gaps = 24/123 (19%)
Query: 12 PASD--WVKLEKSPVYKNDNT---LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQS 66
PA+D V PV + + LR YQL GLNWL+ SW ++ ILADEMGLGKTIQ+
Sbjct: 576 PAADENAVADGAEPVRDKEGSELVLRDYQLLGLNWLVSSWCKQQSVILADEMGLGKTIQT 635
Query: 67 LTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNV 125
L+ + ++ VF + GP LV+ PLSTI WQREFE W LNV
Sbjct: 636 LS----------------FVGYLCHVFH--VYGPHLVVVPLSTIAAWQREFERWLPSLNV 677
Query: 126 IVY 128
IVY
Sbjct: 678 IVY 680
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHG 192
+ GP LV+ PLSTI WQREFE W LNVIVY G
Sbjct: 648 VYGPHLVVVPLSTIAAWQREFERWLPSLNVIVYIG 682
>gi|168050295|ref|XP_001777595.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162671080|gb|EDQ57638.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 775
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 140/218 (64%), Gaps = 7/218 (3%)
Query: 298 SRNMLQEYELFF----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIID 353
+R +++EYE + ++ + + KF V++T++E++ISD +L+ W + I+D
Sbjct: 305 ARAVIREYEWYSTTTGKSGNEGKRPDSQIIKFDVMLTSYEMVISDSNQLRSIPWEVLIVD 364
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
E RLKN KL L HRVLL+GTPLQNN++E+++LLNFL+P+ F + AF +
Sbjct: 365 EGQRLKNSESKLFTLLNTYKFGHRVLLTGTPLQNNLSEMYNLLNFLQPETFPSQGAFEEK 424
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
FG L T +V++L+ L+ P MLRRLK+DV ++I PK E VV VELT +Q +YYR +L +N
Sbjct: 425 FGSLSTAEQVDELKKLVAPHMLRRLKKDVMQNIPPKAERVVPVELTPVQAEYYRALLTKN 484
Query: 474 FSFLSK-GTTSANVPN--LMNTMMELRKCCIHPYLLNG 508
+ L + G N L+N MM+LRK C HPYLL G
Sbjct: 485 YQLLRQVGGCKPGGQNQSLLNIMMQLRKVCNHPYLLPG 522
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 21/108 (19%)
Query: 26 KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQS 85
+ L +QLE LNWL SW++ + ILADEM GLGKTI +
Sbjct: 214 RGGGILFPHQLEALNWLRKSWYHHKKVILADEM-------------------GLGKTISA 254
Query: 86 LTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHAT 131
F+ ++++ + P LV+ PLST+ NW EF W LNVI YH +
Sbjct: 255 CAFLASLYREFRVNAPCLVLVPLSTMSNWLAEFSVWAPFLNVIEYHGS 302
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 104 IAPLSTIPNWQR--------EFEAWTDLNVIVYHATFVVLLQTGSKFFRICLEFFVDAVF 155
I L+ P W R + EA L YH V+L I F+ +++
Sbjct: 203 IEELTVQPEWLRGGGILFPHQLEALNWLRKSWYHHKKVILADEMGLGKTISACAFLASLY 262
Query: 156 KT-GIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHGRRK 195
+ + P LV+ PLST+ NW EF W LNVI YHG K
Sbjct: 263 REFRVNAPCLVLVPLSTMSNWLAEFSVWAPFLNVIEYHGSVK 304
>gi|241999570|ref|XP_002434428.1| conserved hypothetical protein [Ixodes scapularis]
gi|215497758|gb|EEC07252.1| conserved hypothetical protein [Ixodes scapularis]
Length = 3286
Score = 182 bits (462), Expect = 4e-43, Method: Composition-based stats.
Identities = 82/101 (81%), Positives = 90/101 (89%)
Query: 408 EAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYR 467
E FM EFG LKTE +V+KL+ LLKPMMLRRLKEDVEKS+APKEET+VEVELTNIQKKYYR
Sbjct: 1105 ETFMEEFGDLKTEGQVDKLKALLKPMMLRRLKEDVEKSLAPKEETIVEVELTNIQKKYYR 1164
Query: 468 GILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
ILERNF+FL+KG NVPNLMNTMMELRKCCIHPYL+ G
Sbjct: 1165 AILERNFAFLTKGGIGTNVPNLMNTMMELRKCCIHPYLIKG 1205
Score = 68.9 bits (167), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 43/55 (78%)
Query: 219 GEVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLLDL 273
G++ GNW+R+ECF+VE+GLLTFGWGRW+E +A +R + + VEE++R++ L
Sbjct: 1547 GDIAPGNWTRTECFQVEKGLLTFGWGRWEESIAIGLWRRRVSAKDVEEISRVVLL 1601
>gi|410925745|ref|XP_003976340.1| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like [Takifugu
rubripes]
Length = 1955
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 137/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K+ KFHVL+T++E+I D L +W +
Sbjct: 853 SRAVIRENEFSFEDNAIRGGKKASRMKKDTSIKFHVLLTSYELITIDMAVLGSIDWACLV 912
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++FS E F+
Sbjct: 913 VDEAHRLKNNQSKFFRVLNNYPLQHKLLLTGTPLQNNLEELFHLLNFLTPERFSKLEIFL 972
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K + K E +V VEL+++QKKYY+ IL
Sbjct: 973 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSSMQKKYYKFILT 1032
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+NF L +KG N +L+N +M+L+KCC HPYL
Sbjct: 1033 KNFEALNTKG--GGNQVSLLNVVMDLKKCCNHPYLF 1066
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P +K E+ P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 739 ERPPENPVIDPTIKFERQPEYLDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 795
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 796 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 839
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 840 PDMYVVTY 847
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 805 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 851
>gi|302816879|ref|XP_002990117.1| hypothetical protein SELMODRAFT_131060 [Selaginella moellendorffii]
gi|300142130|gb|EFJ08834.1| hypothetical protein SELMODRAFT_131060 [Selaginella moellendorffii]
Length = 700
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 136/211 (64%), Gaps = 5/211 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+R ++++YE + + + K++ YKF V++T +E +I+D L+ W ++DE HR
Sbjct: 94 ARAVIRQYEWYASSHGS---KKQRAYKFKVMLTNYETVINDPTPLRSLPWEALVVDEGHR 150
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN KL L HRVL++GTP+QNN+ E+++LLNFL P++F + AF +F L
Sbjct: 151 LKNSGSKLFTLLNTFSFAHRVLMTGTPMQNNLGEMYNLLNFLLPEKFPSLAAFQEKFSAL 210
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
T +V +++ L+ P MLRRLK+D + I PK E VV VEL+ +Q +YYR +L +N+ L
Sbjct: 211 STAEQVEEIRKLVTPHMLRRLKKDAMQGIPPKAERVVLVELSAVQAEYYRALLTKNYQLL 270
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+GT S +++N +M+LRK C HPYL+ G
Sbjct: 271 RQGTKSQQ--SMINIIMQLRKVCNHPYLIPG 299
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 55/99 (55%), Gaps = 19/99 (19%)
Query: 34 YQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVF 93
+Q+E LNWL W +N ILADEMGLGKTI + C L+ + F
Sbjct: 11 HQMEALNWLRKCWHKKKNVILADEMGLGKTISA----CAF------------LSSLHYEF 54
Query: 94 KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
K +RGP LV+ PLST+PNW EF W LNVI YH +
Sbjct: 55 K--VRGPCLVLVPLSTMPNWMAEFALWAPGLNVIEYHGS 91
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
F ++ +RGP LV+ PLST+PNW EF W LNVI YHG K
Sbjct: 46 FLSSLHYEFKVRGPCLVLVPLSTMPNWMAEFALWAPGLNVIEYHGSVK 93
>gi|118367847|ref|XP_001017133.1| Type III restriction enzyme, res subunit family protein [Tetrahymena
thermophila]
gi|89298900|gb|EAR96888.1| Type III restriction enzyme, res subunit family protein [Tetrahymena
thermophila SB210]
Length = 2184
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 146/217 (67%), Gaps = 4/217 (1%)
Query: 294 SASASRNMLQEYELFFRN--DKNQFIKEKDLYKFHVLITTFEIIISDCLE-LKDFNWRLC 350
S RN + YE + + K ++ ++YKF VLIT+ E+ +SD L + ++
Sbjct: 899 SGQEGRNCCRFYEWLYTDISTKGTVLQSNEIYKFQVLITSNEVFLSDTNNFLINIPFQFI 958
Query: 351 IIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAF 410
++DEAHRLKN+N K+L L+ L + +LL+GTP+QNN EL++LLN++EP +F++ + F
Sbjct: 959 VVDEAHRLKNQNAKILATLKRLPCKRTLLLTGTPIQNNTEELWTLLNYIEPNKFASLQEF 1018
Query: 411 MSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGIL 470
+FG+L+ + +V+ LQ+ +KP +LRR+KEDVE SI P +ET++++E+T +QK YR I
Sbjct: 1019 KEQFGELQNKEQVDNLQVKIKPFLLRRMKEDVEDSIPPLQETIIDIEMTTLQKTLYRAIY 1078
Query: 471 ERNFSFLSKGTTSANVPNLMNTM-MELRKCCIHPYLL 506
ERN S L K +S + +N + M+LRKCC HP+L+
Sbjct: 1079 ERNKSMLQKNFSSMAMNTSLNNLEMQLRKCCNHPFLI 1115
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 68/108 (62%), Gaps = 20/108 (18%)
Query: 23 PVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKT 82
P+YK LR YQLE LNW++ +W++ RN ILADEMGL GKT
Sbjct: 808 PIYKQRKLLRYYQLESLNWMIEAWYSKRNVILADEMGL-------------------GKT 848
Query: 83 IQSLTFVDAVFK-TGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
IQS F++ ++ +RGPFL+IAPLST+ +W+R E WT+LN ++Y+
Sbjct: 849 IQSTAFINHLYTFENVRGPFLIIAPLSTLEHWKRSVEDWTNLNAVLYY 896
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSR 199
+RGPFL+IAPLST+ +W+R E WT+LN ++Y+ + R
Sbjct: 863 NVRGPFLIIAPLSTLEHWKRSVEDWTNLNAVLYYDHSGQEGR 904
>gi|301616286|ref|XP_002937591.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like
[Xenopus (Silurana) tropicalis]
Length = 1906
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 139/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 778 SRAVIRENEFSFEDNAIKSGKKVFRMKKEAQIKFHVLLTSYELITIDHAILGSIEWACLV 837
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N + F+
Sbjct: 838 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLDGFL 897
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 898 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 957
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 958 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 991
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 84/162 (51%), Gaps = 34/162 (20%)
Query: 4 IKKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
++KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 663 LEKPPLAPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG-- 720
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW 120
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 721 -----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMW 763
Query: 121 TDLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K+G
Sbjct: 764 A--------PEFYVVTYTGDKDSRAVIRENEFSFEDNAIKSG 797
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GP+LV APLSTI NW+REFE W + V+ Y G +
Sbjct: 730 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPEFYVVTYTGDK 776
>gi|340500300|gb|EGR27190.1| myb domain protein [Ichthyophthirius multifiliis]
Length = 946
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 146/217 (67%), Gaps = 4/217 (1%)
Query: 294 SASASRNMLQEYELFFRN--DKNQFIKEKDLYKFHVLITTFEIIISDCLE-LKDFNWRLC 350
+ R + +E F+ + K ++ ++YKF VLITT E+ +SD L + ++
Sbjct: 662 AGQPGRESCRSFEWFYTDISTKGTVLQSTEIYKFQVLITTNEVFLSDINNFLINIPFQFI 721
Query: 351 IIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAF 410
++DEAH+LKN+N K+L+ L+ L + +LL+GTP+QNN EL++LLN++EP +F++ + F
Sbjct: 722 VVDEAHKLKNQNAKILQALKRLPCKRTLLLTGTPIQNNTEELWTLLNYIEPTKFASLKEF 781
Query: 411 MSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGIL 470
FG+L+++ +V+ LQ +KP +LRR+KEDVE SI P +ET+ ++E+TNIQK YR I
Sbjct: 782 KENFGELQSQQQVDNLQQKIKPYLLRRMKEDVEDSIPPLQETITDIEMTNIQKTIYRAIY 841
Query: 471 ERNFSFLSKG-TTSANVPNLMNTMMELRKCCIHPYLL 506
ERN S L K +T+ +L N M+LRKCC HP+L+
Sbjct: 842 ERNKSMLQKQFSTTVMNTSLNNLEMQLRKCCNHPFLI 878
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 71/112 (63%), Gaps = 20/112 (17%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
++ P+YK LR YQLE LNW++ SW++ RN ILADEMGL
Sbjct: 567 VKNQPIYKQRKLLRYYQLESLNWMIESWYSKRNVILADEMGL------------------ 608
Query: 79 LGKTIQSLTFVDAVFK-TGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
GKTIQS+ F++ ++ +RGPFL+IAPLST+ +W+R E WT+LN ++Y+
Sbjct: 609 -GKTIQSIAFINHLYTFENVRGPFLIIAPLSTLEHWKRTVEDWTNLNGVLYY 659
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
+RGPFL+IAPLST+ +W+R E WT+LN ++Y+
Sbjct: 626 NVRGPFLIIAPLSTLEHWKRTVEDWTNLNGVLYYD 660
>gi|302786786|ref|XP_002975164.1| hypothetical protein SELMODRAFT_102612 [Selaginella moellendorffii]
gi|300157323|gb|EFJ23949.1| hypothetical protein SELMODRAFT_102612 [Selaginella moellendorffii]
Length = 492
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 139/217 (64%), Gaps = 12/217 (5%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ R ++Q+YE F + KF VL+++FEII+ D L +W+ ++DE
Sbjct: 56 SQEDRAIIQQYE---------FWSPRGNPKFTVLLSSFEIIMKDRSFLAKVSWQYVVVDE 106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHR--VLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
AHRLK++ K L + + +LL+GTP+QNN ELFSLL+FL+P +F + E+FM+
Sbjct: 107 AHRLKSKESKTAHALGCMDVRQGGLLLLTGTPIQNNTKELFSLLSFLDPDKFDSEESFMN 166
Query: 413 EFGQLKTESEVNKLQL-LLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
++G +K +V LQ +L+P +LRR+KEDVEKSI KEET++ VELT Q+ YYR + E
Sbjct: 167 KYGSIKDIEQVKDLQENVLRPRLLRRMKEDVEKSIPLKEETIIWVELTKDQRAYYRALYE 226
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
S L KGT +N+PNL N MELRK C HP+L +G
Sbjct: 227 NRISDLIKGTQPSNMPNLRNMAMELRKLCNHPFLCDG 263
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 77 MGLGKTIQSLTFVDAV-FKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHAT 131
MGLGKTIQS+ ++ + +K I+GPFL++AP+ST+ +WQRE E+ TD+N +VY +
Sbjct: 1 MGLGKTIQSVAMLENLRYKKRIQGPFLIVAPVSTLGHWQREIESLTDMNCVVYMGS 56
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 33/41 (80%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRK 195
+K I+GPFL++AP+ST+ +WQRE E+ TD+N +VY G ++
Sbjct: 18 YKKRIQGPFLIVAPVSTLGHWQREIESLTDMNCVVYMGSQE 58
>gi|356562107|ref|XP_003549315.1| PREDICTED: uncharacterized protein LOC100779829 [Glycine max]
Length = 2586
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 143/224 (63%), Gaps = 12/224 (5%)
Query: 295 ASASRNMLQEYELFF--------RNDKNQFIKE--KDLYKFHVLITTFEIIISDCLELKD 344
++ +R ++EYE +F + Q + E ++ KF VL+T++EII SD LK
Sbjct: 1565 SAKARAFIREYEFYFPKNQKRIKKKKSRQIVNESKQERIKFDVLLTSYEIINSDTSSLKH 1624
Query: 345 FNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQF 404
W I+DE HRLKN++ KL L+ +HRVLL+GTPLQNN++ELF L++FL+ +F
Sbjct: 1625 IKWECMIVDEGHRLKNKDSKLFSSLKQYSSKHRVLLTGTPLQNNLDELFMLMHFLDAGKF 1684
Query: 405 SNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKK 464
+ E F EF + E ++ +L +L P +LRRLK+DV K + PK+E ++ VEL + QK+
Sbjct: 1685 GSLEEFQEEFKDINREEQILRLHKMLAPHLLRRLKKDVMKELPPKKELILRVELCSKQKE 1744
Query: 465 YYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
YY+ IL RN+ L+ A++ +L+N +MELRK C HPY+L G
Sbjct: 1745 YYKAILTRNYQILTH-QGGAHI-SLINVVMELRKLCCHPYMLQG 1786
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 70/118 (59%), Gaps = 21/118 (17%)
Query: 15 DWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
++++ E S + + L +YQLEGLN+L FSW+ + ILADEMGL
Sbjct: 1468 EFLQYEHSLQFLSGGALHSYQLEGLNFLRFSWYKQTHVILADEMGL-------------- 1513
Query: 75 DEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
GKTIQS+ F+ ++F+ + P LV+APLST+ NW+REF W +NV++Y +
Sbjct: 1514 -----GKTIQSIAFLASLFEENV-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGS 1565
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 128 YHATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLN 186
Y T V+L I F+ ++F+ + P LV+APLST+ NW+REF W +N
Sbjct: 1500 YKQTHVILADEMGLGKTIQSIAFLASLFEENV-SPHLVVAPLSTLRNWEREFATWAPQMN 1558
Query: 187 VIVYHGRRK 195
V++Y G K
Sbjct: 1559 VVMYFGSAK 1567
>gi|17569817|ref|NP_510140.1| Protein CHD-3 [Caenorhabditis elegans]
gi|6165993|sp|Q22516.2|CHD3_CAEEL RecName: Full=Chromodomain-helicase-DNA-binding protein 3 homolog;
Short=CHD-3
gi|3879819|emb|CAA91810.1| Protein CHD-3 [Caenorhabditis elegans]
gi|11095331|gb|AAG29837.1| CHD-3 [Caenorhabditis elegans]
Length = 1787
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E+E F + K IK + KFHVL+T++E I D L +W +
Sbjct: 702 SRMVIREHEFSFVDGAVRGGPKVSKIKTLENLKFHVLLTSYECINMDKAILSSIDWAALV 761
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN + LR ++++RVLL+GTPLQNN+ ELF LLNFL P +F+ E+F
Sbjct: 762 VDEAHRLKNNQSTFFKNLREYNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFT 821
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
+EF ++ E ++ KL LL P MLRRLK DV + K+E +V VEL+ +QKKYY+ IL
Sbjct: 822 AEFSEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILT 881
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ + +L+N +MEL+KCC HPYL
Sbjct: 882 RNFDALNVKNGGTQM-SLINIIMELKKCCNHPYLF 915
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 70/135 (51%), Gaps = 32/135 (23%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
L YQLEG+NWL W NG + ILADEMGLG KT+QSLTF+
Sbjct: 616 LHPYQLEGINWLRHCWSNGTDAILADEMGLG-------------------KTVQSLTFLY 656
Query: 91 AVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVVLLQTGSKFFRICL-- 147
+ K G +GPFL+ APLSTI NW+RE E W F V+ G + R+ +
Sbjct: 657 TLMKEGHTKGPFLIAAPLSTIINWEREAELWC--------PDFYVVTYVGDRESRMVIRE 708
Query: 148 -EF-FVDAVFKTGIR 160
EF FVD + G +
Sbjct: 709 HEFSFVDGAVRGGPK 723
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRK 195
F+ + K G +GPFL+ APLSTI NW+RE E W D V+ Y G R+
Sbjct: 654 FLYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRE 701
>gi|156379809|ref|XP_001631648.1| predicted protein [Nematostella vectensis]
gi|156218692|gb|EDO39585.1| predicted protein [Nematostella vectensis]
Length = 824
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 137/217 (63%), Gaps = 8/217 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR ++ ++ F D K +K+ KFHVL+T++E++ D L+ +W + +
Sbjct: 344 SRATIRNFDFSFDEDAFKSGLKAYKLKKDSPVKFHVLLTSYELVSIDSASLQSIDWAMLV 403
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++ +++LL+GTPLQNN+ EL++LL FL+P +F+N F+
Sbjct: 404 VDEAHRLKNNQSKFFRTLSDYNIGYKLLLTGTPLQNNLEELWNLLFFLDPVEFNNKNNFL 463
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
+EF + E ++ KL +L P MLRRLK DV K I K E +V VEL+ +QKKYY+ IL
Sbjct: 464 TEFDNVAKEDQIKKLHDILGPHMLRRLKADVLKGIPSKSELIVRVELSPMQKKYYKWILT 523
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
RNF L+ T A +L+N MMEL+KCC HPYL +
Sbjct: 524 RNFEALN--TKGAQQVSLLNVMMELKKCCNHPYLFHA 558
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 80/152 (52%), Gaps = 36/152 (23%)
Query: 18 KLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
+ EK P Y ++ L YQ EGLNWL FSW G N ILADEM
Sbjct: 243 RYEKQPAYLDETGGKLHEYQREGLNWLRFSWAQGTNTILADEM----------------- 285
Query: 76 EMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHATFV 133
GLGKTIQ+++F+ ++ K G +GPFLV APLST+ NW+REFE W D+ V+ Y
Sbjct: 286 --GLGKTIQTISFLYSLMKEGHSQGPFLVSAPLSTLVNWEREFEFWAPDMYVVTY----- 338
Query: 134 VLLQTGSKFFRICLE----FFVDAVFKTGIRG 161
G K R + F + FK+G++
Sbjct: 339 ----AGDKESRATIRNFDFSFDEDAFKSGLKA 366
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
F+ ++ K G +GPFLV APLST+ NW+REFE W D+ V+ Y G ++
Sbjct: 296 FLYSLMKEGHSQGPFLVSAPLSTLVNWEREFEFWAPDMYVVTYAGDKE 343
>gi|392340124|ref|XP_001063352.3| PREDICTED: chromodomain-helicase-DNA-binding protein 4 [Rattus
norvegicus]
Length = 1921
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 134/215 (62%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 805 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 864
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P+ N E F+
Sbjct: 865 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPESRVNLEGFL 924
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 925 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 984
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 985 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1018
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 691 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 747
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 748 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 791
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 792 PDMYVVTY 799
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 757 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 803
>gi|302791607|ref|XP_002977570.1| hypothetical protein SELMODRAFT_106921 [Selaginella moellendorffii]
gi|300154940|gb|EFJ21574.1| hypothetical protein SELMODRAFT_106921 [Selaginella moellendorffii]
Length = 492
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 139/217 (64%), Gaps = 12/217 (5%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ R ++Q+YE F + KF VL+++FEII+ D L +W+ ++DE
Sbjct: 56 SQEDRAIIQQYE---------FWSTRGNPKFTVLLSSFEIIMKDRSFLAKVSWQYVVVDE 106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHR--VLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
AHRLK++ K L + + +LL+GTP+QNN ELFSLL+FL+P +F + E+FM+
Sbjct: 107 AHRLKSKESKTAHALGCMDVRQGGLLLLTGTPIQNNTKELFSLLSFLDPDKFDSEESFMN 166
Query: 413 EFGQLKTESEVNKLQL-LLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
++G +K +V LQ +L+P +LRR+KEDVEKSI KEET++ VELT Q+ YYR + E
Sbjct: 167 KYGSIKDIEQVKDLQENVLRPRLLRRMKEDVEKSIPLKEETIIWVELTKGQRAYYRALYE 226
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
S L KGT +N+PNL N MELRK C HP+L +G
Sbjct: 227 NRISDLIKGTQPSNMPNLRNMAMELRKLCNHPFLCDG 263
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Query: 77 MGLGKTIQSLTFVDAV-FKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHAT 131
MGLGKTIQS+ ++ + +K I GPFL++AP+ST+ +WQRE E+ TD+N +VY +
Sbjct: 1 MGLGKTIQSVAMLENLRYKKRIEGPFLIVAPVSTLGHWQREIESLTDMNCVVYMGS 56
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRK 195
+K I GPFL++AP+ST+ +WQRE E+ TD+N +VY G ++
Sbjct: 18 YKKRIEGPFLIVAPVSTLGHWQREIESLTDMNCVVYMGSQE 58
>gi|302816250|ref|XP_002989804.1| hypothetical protein SELMODRAFT_428350 [Selaginella moellendorffii]
gi|300142370|gb|EFJ09071.1| hypothetical protein SELMODRAFT_428350 [Selaginella moellendorffii]
Length = 2150
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 136/211 (64%), Gaps = 5/211 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+R ++++YE + + + K++ YKF V++T +E +I+D L+ W ++DE HR
Sbjct: 780 ARAVIRQYEWYASSHGS---KKQRAYKFKVMLTNYETVINDPTPLRSLPWEALVVDEGHR 836
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN KL L HRVL++GTP+QNN+ E+++LLNFL P++F + AF +F L
Sbjct: 837 LKNSGSKLFTLLNTFSFAHRVLMTGTPMQNNLGEMYNLLNFLLPEKFPSLAAFQEKFSAL 896
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
T +V +++ L+ P MLRRLK+D + I PK E VV VEL+ +Q +YYR +L +N+ L
Sbjct: 897 STAEQVEEIRKLVTPHMLRRLKKDAMQGIPPKAERVVLVELSAVQAEYYRALLTKNYQLL 956
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+GT S +++N +M+LRK C HPYL+ G
Sbjct: 957 RQGTKSQQ--SMINIIMQLRKVCNHPYLIPG 985
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 60/114 (52%), Gaps = 19/114 (16%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
+++ P L +Q+E LNWL W +N ILADEMGLGKTI + C
Sbjct: 682 VKEQPAELQGGQLFPHQMEALNWLRKCWHKKKNVILADEMGLGKTISA----CAF----- 732
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHAT 131
L+ + FK +RGP LV+ PLST+PNW EF W LNVI YH +
Sbjct: 733 -------LSSLHYEFK--VRGPCLVLVPLSTMPNWMAEFALWAPGLNVIEYHGS 777
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHGRRK 195
F ++ +RGP LV+ PLST+PNW EF W LNVI YHG K
Sbjct: 732 FLSSLHYEFKVRGPCLVLVPLSTMPNWMAEFALWAPGLNVIEYHGSVK 779
>gi|427798209|gb|JAA64556.1| Putative chromatin remodeling complex wstf-iswi small subunit,
partial [Rhipicephalus pulchellus]
Length = 1386
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 140/215 (65%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFF-----RN-DKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E+E F RN +K +K+ KFHVL+T++E++ D L +W++ +
Sbjct: 261 SRAVIREHEFSFDEKAVRNPNKACRMKKDSAVKFHVLLTSYELVCIDATILGSVDWQVLV 320
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K + L + +++LL+GTPLQNN+ ELF LLNFL PQ F++ + F+
Sbjct: 321 VDEAHRLKNNQSKFFKVLNNYKINYKLLLTGTPLQNNLEELFHLLNFLSPQNFNDLQGFL 380
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
+EF L E +V KL LL +LRRLK DV K + K E ++ V+LT +QKKYY+ IL
Sbjct: 381 NEFADLAKEEQVKKLHDLLGCHLLRRLKADVLKGMPSKSEFIIRVDLTPLQKKYYKYILT 440
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RN+ L+ S +V +L+N MM+L+KCC HPYL
Sbjct: 441 RNYEALNAKGGSHSV-SLLNIMMDLKKCCNHPYLF 474
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 72/125 (57%), Gaps = 23/125 (18%)
Query: 8 KKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
+ + P K E P V +NDN L YQLEG+NWL FSW N + ILADEMG
Sbjct: 150 QDRTPVDPKRKYESQPPFVLENDNELHPYQLEGVNWLRFSWANHTDTILADEMG------ 203
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DL 123
LGKTIQ++ F+ ++FK G RGPFLV APLSTI NW+REFE W D
Sbjct: 204 -------------LGKTIQTIVFLYSLFKEGHCRGPFLVSAPLSTIINWEREFEVWAPDF 250
Query: 124 NVIVY 128
V+ Y
Sbjct: 251 YVVTY 255
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ ++FK G RGPFLV APLSTI NW+REFE W D V+ Y G +
Sbjct: 213 FLYSLFKEGHCRGPFLVSAPLSTIINWEREFEVWAPDFYVVTYIGDK 259
>gi|359475843|ref|XP_002282918.2| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Vitis
vinifera]
Length = 1472
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 146/224 (65%), Gaps = 12/224 (5%)
Query: 295 ASASRNMLQEYELFF--------RNDKNQFIKE--KDLYKFHVLITTFEIIISDCLELKD 344
+S +R+++++YE +F + Q + E +D KF VL+T++E+I D LK
Sbjct: 367 SSHARSVIRDYEFYFPKSHKKIKKKKSGQIVTESKQDRIKFDVLLTSYEMINLDSASLKP 426
Query: 345 FNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQF 404
W I+DE HRLKN++ KL L+ +HRVLL+GTPLQNN++ELF L++FL+ +F
Sbjct: 427 IKWECMIVDEGHRLKNKDSKLFLSLKQYLSKHRVLLTGTPLQNNLDELFMLMHFLDAGKF 486
Query: 405 SNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKK 464
+ E F EF + E ++++L +L P +LRR+K+DV K + PK+E ++ VEL++ QK+
Sbjct: 487 GSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKE 546
Query: 465 YYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
YY+ IL RN+ L++ A + +L+N +MELRK C HPY+L G
Sbjct: 547 YYKAILTRNYQILTR-RGGAQI-SLINVVMELRKLCCHPYMLEG 588
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 72/125 (57%), Gaps = 25/125 (20%)
Query: 15 DWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
++ + E SP + + +L YQLEGLN+L FSW + ILADEMGL
Sbjct: 270 EFQQFEHSPEFLSGGSLHPYQLEGLNFLRFSWGKQTHVILADEMGL-------------- 315
Query: 75 DEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY----H 129
GKTIQS+ F+ ++F+ + P LV+APLST+ NW+REF W +NV++Y H
Sbjct: 316 -----GKTIQSIAFLASLFEENV-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSSH 369
Query: 130 ATFVV 134
A V+
Sbjct: 370 ARSVI 374
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++F+ + P LV+APLST+ NW+REF W +NV++Y G
Sbjct: 324 FLASLFEENV-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVG 366
>gi|359472760|ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
Length = 2355
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 137/211 (64%), Gaps = 1/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+R +++++E + D N K+ YKF+VL+TT+E++++D L+ W + ++DE HR
Sbjct: 844 ARAIIRQHE-WHGTDPNGSNKKTASYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHR 902
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN KL L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F +F L
Sbjct: 903 LKNSGSKLFSLLNSFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPATFPSLFSFEEKFNDL 962
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
T +V +L+ L+ P MLRRLK+D ++I PK E +V VEL++IQ +YYR +L +N+ L
Sbjct: 963 TTAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQLL 1022
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+++N +M+LRK C HPYL+ G
Sbjct: 1023 RNMGKGVAQQSMLNIVMQLRKVCNHPYLIPG 1053
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 62/118 (52%), Gaps = 19/118 (16%)
Query: 14 SDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
SD V L + P +L +QLE LNWL W +N ILADEMGLGKT+ + C
Sbjct: 741 SDIVTLAEQPKELKGGSLFPHQLEALNWLRKCWHKSKNVILADEMGLGKTVSA----CAF 796
Query: 74 ADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
+ SL F FK + P LV+ PLST+PNW EF W +LNV+ YH
Sbjct: 797 ---------LSSLYF---EFKATL--PCLVLVPLSTMPNWLAEFSLWAPNLNVVEYHG 840
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Query: 162 PFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
P LV+ PLST+PNW EF W +LNV+ YHG
Sbjct: 809 PCLVLVPLSTMPNWLAEFSLWAPNLNVVEYHG 840
>gi|123503388|ref|XP_001328501.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
gi|121911445|gb|EAY16278.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
Length = 1247
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 135/210 (64%), Gaps = 8/210 (3%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R + + YE +F N + + F VL+TT++ I + NW + + DEAH++
Sbjct: 254 REICKTYEFYFENTR--------IPIFQVLLTTYDYITRENELFSGVNWEVIVCDEAHKM 305
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK 418
KN N KL++ ++ L + ++LL+GTP+QN+ EL+SLLN++ P++F + E F +FG +
Sbjct: 306 KNSNSKLMQNMKNLKSKFKLLLTGTPIQNSTPELWSLLNYINPEKFESLEEFQEKFGTVN 365
Query: 419 TESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS 478
S++++L +LKP+MLRR+K DVEKS+ P EE ++E ++T++QK YYR + RN FL
Sbjct: 366 ESSQISQLNSILKPIMLRRVKSDVEKSLTPIEEIIIECKMTDVQKYYYRSVFTRNTVFLL 425
Query: 479 KGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+GT LMN MELRK C HPYL+ G
Sbjct: 426 RGTEKKTPNFLMNITMELRKVCNHPYLIQG 455
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 73/125 (58%), Gaps = 22/125 (17%)
Query: 7 PKKKPPASDWV--KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P++ P D+ K+E P K+ ++R YQL+GLN+LM W N RN ILADEM
Sbjct: 142 PEELNPDVDYTYQKVESLPTSKSGFSVRNYQLDGLNFLMNCWCNHRNAILADEM------ 195
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFK-TGIRGPFLVIAPLSTIPNWQREFEAWTDL 123
GLGKT+Q F++ + K IRGPFL+I PLSTI +W++E E WTDL
Sbjct: 196 -------------GLGKTLQVSVFLNTLNKLKKIRGPFLIIVPLSTIGHWEQELEEWTDL 242
Query: 124 NVIVY 128
+ ++
Sbjct: 243 HCTLF 247
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLN--VIVYHGRRKKLSRR-----DKERLRLKYV- 210
IRGPFL+I PLSTI +W++E E WTDL+ + ++ R+++ + + R+ + V
Sbjct: 216 IRGPFLIIVPLSTIGHWEQELEEWTDLHCTLFCFNKYRREICKTYEFYFENTRIPIFQVL 275
Query: 211 --AADYVPKDGEVLYG-NWSRSEC 231
DY+ ++ E+ G NW C
Sbjct: 276 LTTYDYITRENELFSGVNWEVIVC 299
>gi|198432555|ref|XP_002131918.1| PREDICTED: similar to chromodomain helicase DNA binding protein 3
[Ciona intestinalis]
Length = 1904
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 135/219 (61%), Gaps = 13/219 (5%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR ++++ E + ++ K +K L KFHVL+T++E+ D L +W +
Sbjct: 764 SRAVIRDNEFSYDDNAIRSGAKASRLKSGCLVKFHVLLTSYEMCTIDSATLSSVDWVMVC 823
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
IDEAHRLKN K + L ++ H++LL+GTPLQNN+ ELF LLNFL P +F++ F+
Sbjct: 824 IDEAHRLKNNQSKFFKVLSEYNVAHKLLLTGTPLQNNLEELFHLLNFLVPDKFTDMNGFL 883
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF ++ E +V KL +L P MLRRLK DV +A K E +V V L+ +Q+K+YR IL
Sbjct: 884 DEFAEIAQEDQVKKLHEMLGPHMLRRLKADVLTGLASKSEFIVRVNLSPLQRKFYRYILA 943
Query: 472 RNFSFLSKGTTSANVPN---LMNTMMELRKCCIHPYLLN 507
RNF KG S PN L+N MM+L+KCC HPYL N
Sbjct: 944 RNF----KGLNSRGGPNNSSLLNIMMDLKKCCNHPYLFN 978
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 62/103 (60%), Gaps = 21/103 (20%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
+L YQLEGLNWL FSW G + ILADEMG LGKTIQ++ FV
Sbjct: 677 SLHEYQLEGLNWLRFSWTQGTDTILADEMG-------------------LGKTIQTIVFV 717
Query: 90 DAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
++ + G RGPFL+ PLST+ NW+REFE W +L V+ Y+
Sbjct: 718 KSLVEEGHTRGPFLISVPLSTMINWEREFELWAPNLYVVSYYG 760
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
FV ++ + G RGPFL+ PLST+ NW+REFE W +L V+ Y+G R
Sbjct: 716 FVKSLVEEGHTRGPFLISVPLSTMINWEREFELWAPNLYVVSYYGDR 762
>gi|317418651|emb|CBN80689.1| Chromodomain-helicase-DNA-binding protein 5 [Dicentrarchus labrax]
Length = 1981
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 137/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ + F +KD KFHVL+T++E+I D L W +
Sbjct: 769 SRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLTSYELITIDQAILGSITWACLV 828
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L + +++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 829 VDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 888
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 889 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKFILT 948
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 949 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 982
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 82/159 (51%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSPVYKN--DNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P +K E P Y N TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 657 PPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG----- 711
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKT+Q++ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 712 --------------LGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA-- 755
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D+ K+G
Sbjct: 756 ------PDFYVVTYTGDKDSRAIIRENEFTFEDSAVKSG 788
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D V+ Y G +
Sbjct: 721 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDK 767
>gi|301623129|ref|XP_002940874.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 [Xenopus
(Silurana) tropicalis]
Length = 1954
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E ++++ K F +K + KFHVL+T++E++ D L W +
Sbjct: 841 SRSVIRENEFSYQDNVMKGGKKAFKMKAQAQVKFHVLLTSYELVTIDQAALGSIRWACLV 900
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N + F+
Sbjct: 901 VDEAHRLKNNQSKFFRVLNGYQIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLDGFL 960
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P +LRR+K DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 961 EEFADISKEDQIKKLHDLLGPHLLRRMKADVFKNMPAKTELIVRVELSPMQKKYYKFILT 1020
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1021 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1054
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 79/152 (51%), Gaps = 34/152 (22%)
Query: 17 VKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
VK + P V TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 739 VKYDTQPQFVSSTGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG--------------- 783
Query: 75 DEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFV 133
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W F
Sbjct: 784 ----LGKTIQTIVFLYSLYKEGHTQGPFLVSAPLSTIINWEREFQMWA--------PDFY 831
Query: 134 VLLQTGSKFFRICL---EF-FVDAVFKTGIRG 161
V+ TG K R + EF + D V K G +
Sbjct: 832 VVTYTGDKDSRSVIRENEFSYQDNVMKGGKKA 863
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GPFLV APLSTI NW+REF+ W D V+ Y G + S
Sbjct: 793 FLYSLYKEGHTQGPFLVSAPLSTIINWEREFQMWAPDFYVVTYTGDKDSRS 843
>gi|356515042|ref|XP_003526210.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like
[Glycine max]
Length = 1440
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 144/224 (64%), Gaps = 12/224 (5%)
Query: 295 ASASRNMLQEYELFF--------RNDKNQFIKE--KDLYKFHVLITTFEIIISDCLELKD 344
++ +R++++EYE +F + I E +D KF VL+T++E+I D LK
Sbjct: 367 SAQARSVIREYEFYFPKKQKKIKKKKSGHLISESKQDRIKFDVLLTSYEMINFDTASLKP 426
Query: 345 FNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQF 404
W I+DE HRLKN++ KL L+ HRVLL+GTPLQNN++ELF L++FL+ +F
Sbjct: 427 IKWECMIVDEGHRLKNKDSKLFSSLKQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKF 486
Query: 405 SNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKK 464
+ E F EF + E ++++L +L P +LRR+K+DV K + PK+E ++ +EL++ QK+
Sbjct: 487 GSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRIELSSKQKE 546
Query: 465 YYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
YY+ IL RN+ L++ A + +L+N +MELRK C HPY+L G
Sbjct: 547 YYKAILTRNYQILTR-RGGAQI-SLINVVMELRKLCCHPYMLEG 588
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 67/110 (60%), Gaps = 21/110 (19%)
Query: 20 EKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGL 79
E+SP + + TL YQLEGLN+L FSW + ILADEMGL
Sbjct: 275 EQSPEFLSGGTLHPYQLEGLNFLRFSWSKQTHVILADEMGL------------------- 315
Query: 80 GKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GKTIQS+ F+ ++FK G+ P LV+APLST+ NW+REF W +NV++Y
Sbjct: 316 GKTIQSIAFLASLFKEGV-SPHLVVAPLSTLRNWEREFATWAPHMNVLMY 364
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++FK G+ P LV+APLST+ NW+REF W +NV++Y G
Sbjct: 324 FLASLFKEGV-SPHLVVAPLSTLRNWEREFATWAPHMNVLMYVG 366
>gi|296082077|emb|CBI21082.3| unnamed protein product [Vitis vinifera]
Length = 1356
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 146/224 (65%), Gaps = 12/224 (5%)
Query: 295 ASASRNMLQEYELFF--------RNDKNQFIKE--KDLYKFHVLITTFEIIISDCLELKD 344
+S +R+++++YE +F + Q + E +D KF VL+T++E+I D LK
Sbjct: 367 SSHARSVIRDYEFYFPKSHKKIKKKKSGQIVTESKQDRIKFDVLLTSYEMINLDSASLKP 426
Query: 345 FNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQF 404
W I+DE HRLKN++ KL L+ +HRVLL+GTPLQNN++ELF L++FL+ +F
Sbjct: 427 IKWECMIVDEGHRLKNKDSKLFLSLKQYLSKHRVLLTGTPLQNNLDELFMLMHFLDAGKF 486
Query: 405 SNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKK 464
+ E F EF + E ++++L +L P +LRR+K+DV K + PK+E ++ VEL++ QK+
Sbjct: 487 GSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKE 546
Query: 465 YYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
YY+ IL RN+ L++ A + +L+N +MELRK C HPY+L G
Sbjct: 547 YYKAILTRNYQILTR-RGGAQI-SLINVVMELRKLCCHPYMLEG 588
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 72/125 (57%), Gaps = 25/125 (20%)
Query: 15 DWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
++ + E SP + + +L YQLEGLN+L FSW + ILADEMGL
Sbjct: 270 EFQQFEHSPEFLSGGSLHPYQLEGLNFLRFSWGKQTHVILADEMGL-------------- 315
Query: 75 DEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY----H 129
GKTIQS+ F+ ++F+ + P LV+APLST+ NW+REF W +NV++Y H
Sbjct: 316 -----GKTIQSIAFLASLFEENV-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVGSSH 369
Query: 130 ATFVV 134
A V+
Sbjct: 370 ARSVI 374
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++F+ + P LV+APLST+ NW+REF W +NV++Y G
Sbjct: 324 FLASLFEENV-SPHLVVAPLSTLRNWEREFATWAPQMNVVMYVG 366
>gi|326671885|ref|XP_003199545.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5 [Danio rerio]
Length = 1985
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 137/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ + F +KD KFHVL+T++E+I D L W +
Sbjct: 793 SRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHVLLTSYELITIDQAILGSITWACLV 852
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L + +++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 853 VDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 912
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 913 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKFILT 972
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 973 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1006
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 82/149 (55%), Gaps = 34/149 (22%)
Query: 17 VKLEKSPVYKND--NTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
+K E+ P Y +D TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 691 IKFEQQPWYIDDTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--------------- 735
Query: 75 DEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFV 133
LGKT+Q++ F+ +++K G +GPFLV APLSTI NW+REFE W F
Sbjct: 736 ----LGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA--------PDFY 783
Query: 134 VLLQTGSKFFRICL---EF-FVDAVFKTG 158
V+ TG K R + EF F D+ K+G
Sbjct: 784 VVTYTGDKESRAIIRENEFTFEDSAVKSG 812
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
F+ +++K G +GPFLV APLSTI NW+REFE W D V+ Y G ++
Sbjct: 745 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKE 792
>gi|297791319|ref|XP_002863544.1| hypothetical protein ARALYDRAFT_917093 [Arabidopsis lyrata subsp.
lyrata]
gi|297309379|gb|EFH39803.1| hypothetical protein ARALYDRAFT_917093 [Arabidopsis lyrata subsp.
lyrata]
Length = 2251
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 136/214 (63%), Gaps = 1/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ R ++++YE +N K+ YKF+VL+TT+E++++D L+ W + ++DE
Sbjct: 775 SAKGRAIIRDYEWRAKNPTGT-TKKPTSYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDE 833
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
HRLKN KL L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F F
Sbjct: 834 GHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPLSFPSLSSFEERF 893
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + +V +L+ L+ P MLRRLK+D ++I PK E +V VELT+IQ +YYR +L +N+
Sbjct: 894 HDLTSAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNY 953
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +++N +M+LRK C HPYL+ G
Sbjct: 954 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG 987
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 14 SDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
S+ V L + P L +QLE LNWL W +N ILADEMGLGKT+ +
Sbjct: 675 SEIVTLTEQPQELRGGALFPHQLEALNWLRRCWHKSKNVILADEMGLGKTVSA------- 727
Query: 74 ADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHAT 131
S F+ G+ P LV+ PLST+PNW EF W LNV+ YH +
Sbjct: 728 -----------SAFLSSLYFEFGVARPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGS 775
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHGRRK 195
F F+ G+ P LV+ PLST+PNW EF W LNV+ YHG K
Sbjct: 730 FLSSLYFEFGVARPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAK 777
>gi|224143281|ref|XP_002324903.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222866337|gb|EEF03468.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1334
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 146/224 (65%), Gaps = 12/224 (5%)
Query: 295 ASASRNMLQEYELFF--------RNDKNQFIKEK--DLYKFHVLITTFEIIISDCLELKD 344
++ +R +++EYE ++ + Q + E+ D KF VL+T++E+I D LK
Sbjct: 368 SAQARAVIREYEFYYPKKHKKIKKKKSGQVVTERKQDRIKFDVLLTSYEMINLDTTSLKP 427
Query: 345 FNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQF 404
W I+DE HRLKN++ KL ++ + HRVLL+GTPLQNN++ELF L++FL+ +F
Sbjct: 428 IKWECMIVDEGHRLKNKDSKLFLSMKQYYSNHRVLLTGTPLQNNLDELFMLMHFLDAGKF 487
Query: 405 SNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKK 464
++ E F EF + E ++++L +L P +LRR+K+DV K + PK+E ++ VEL++ QK+
Sbjct: 488 ASLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVELSSKQKE 547
Query: 465 YYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
YY+ IL RN+ L++ A + +L+N +MELRK C HPY+L G
Sbjct: 548 YYKAILTRNYQILTR-RGGAQI-SLINVVMELRKLCCHPYMLEG 589
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 64/108 (59%), Gaps = 21/108 (19%)
Query: 22 SPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGK 81
+PV + +L YQLEGLN+L FSW + ILADEMGL GK
Sbjct: 278 APVLVIEGSLHPYQLEGLNFLRFSWSKQTHVILADEMGL-------------------GK 318
Query: 82 TIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
TIQS+ F+ ++F+ GI LV+APLST+ NW+REF W +NV++Y
Sbjct: 319 TIQSIAFLASLFEEGI-SHHLVVAPLSTLRNWEREFATWAPQMNVVMY 365
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++F+ GI LV+APLST+ NW+REF W +NV++Y G
Sbjct: 325 FLASLFEEGI-SHHLVVAPLSTLRNWEREFATWAPQMNVVMYVG 367
>gi|301776989|ref|XP_002923917.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like
[Ailuropoda melanoleuca]
Length = 1948
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 140/217 (64%), Gaps = 10/217 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 784 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 843
Query: 352 IDEAHRLKNRNCK-LLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAF 410
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F
Sbjct: 844 VDEAHRLKNNQPKSFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGF 903
Query: 411 MSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGIL 470
+ EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 904 LEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFIL 963
Query: 471 ERNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 964 TRNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 998
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 670 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 726
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 727 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 770
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 771 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 803
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 736 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 786
>gi|123424079|ref|XP_001306506.1| SNF2 family N-terminal domain containing protein [Trichomonas
vaginalis G3]
gi|121888084|gb|EAX93576.1| SNF2 family N-terminal domain containing protein [Trichomonas
vaginalis G3]
Length = 1366
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 141/214 (65%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ S ++ + E+ ++DK + +K F VLIT ++ +++ EL++ +W+ ++DE
Sbjct: 324 SPESLQIINDTEIRVKDDKGKSLK--GFVGFDVLITNYDTVVNQSKELQEIDWQYLVVDE 381
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
HRLKNRN L + L+L + H LL+GTP+QNNV+EL+SLL+F++ + F+++E F +F
Sbjct: 382 GHRLKNRNSLLYKTLQLFNFVHCTLLTGTPIQNNVDELYSLLSFIDKENFNSSEEFDEKF 441
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G + +V++L+ L+KP +LRR K DV+ SI PK ET+++VELT QKK Y+ ++ N
Sbjct: 442 GNMTNSEQVDELKKLIKPYILRRHKSDVDNSILPKTETIIDVELTRQQKKIYKALISENR 501
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L K T ++P+L + ELRK C HPYL+ G
Sbjct: 502 EVLMKKLTKNSIPSLNSLATELRKVCNHPYLIKG 535
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 76/124 (61%), Gaps = 20/124 (16%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL- 67
K+PP +++ + + P K+ +LR YQ+ G+NWL F ++N RN IL DEMGLGKT Q +
Sbjct: 220 KRPPNTNYKEYKTYPESKDKFSLRDYQVIGVNWLRFCYYNKRNSILGDEMGLGKTAQIVS 279
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIV 127
T N + DE I GPFL+IAPLST+P+WQ EF+ W++LN I+
Sbjct: 280 TLNILSKDE-------------------NINGPFLIIAPLSTLPHWQSEFKKWSNLNSII 320
Query: 128 YHAT 131
YH +
Sbjct: 321 YHGS 324
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLK 208
I GPFL+IAPLST+P+WQ EF+ W++LN I+YHG + L + +R+K
Sbjct: 290 INGPFLIIAPLSTLPHWQSEFKKWSNLNSIIYHGSPESLQIINDTEIRVK 339
>gi|145484966|ref|XP_001428492.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395578|emb|CAK61094.1| unnamed protein product [Paramecium tetraurelia]
Length = 1405
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/219 (44%), Positives = 139/219 (63%), Gaps = 5/219 (2%)
Query: 293 KSASASRNMLQEYELFFRND--KNQFIKEKDLYKFHVLITTFEIIISD-CLELKDFNWRL 349
+ R +++YE F+ + K + ++LYKF +LIT+FE+ D ++ ++
Sbjct: 534 QQGQPGRQAIRDYEWFYTDISLKGNTLPSQELYKFQILITSFEVFNQDHSTYIQQIPFQF 593
Query: 350 CIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEA 409
I+DEAHRLKN+N K+L L+ L ++L+GTP+QNN EL+SLLNF+EP QF N
Sbjct: 594 IIVDEAHRLKNQNAKILASLKRLVCSRIMILTGTPVQNNPEELWSLLNFIEPYQFPNLNQ 653
Query: 410 FMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGI 469
F S+FG L T ++ KL LKP +LRR KEDVE+SI P +E +++VELTN+QK YR +
Sbjct: 654 FKSQFGDLNTAEQIEKLNKTLKPYILRRQKEDVEQSIPPLQENIIDVELTNVQKTLYRAL 713
Query: 470 LERNFSFLSKG--TTSANVPNLMNTMMELRKCCIHPYLL 506
ERN S L +G +A + +L N M LRK C HP LL
Sbjct: 714 YERNKSALIQGFSQQTAQIASLNNLDMHLRKLCNHPLLL 752
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 72/126 (57%), Gaps = 27/126 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
KKP + P + +YK+ LR YQLE LNW++ +++N RN +LADEMGL
Sbjct: 433 KKPYQYTPRT-------QTIYKDRKLLRDYQLESLNWMIDAYYNNRNVLLADEMGL---- 481
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDA-VFKTGIRGPFLVIAPLSTIPNWQREFEAWTDL 123
GKTIQS+ F++ V RGPFL+IAPLST+ +W+R E WT L
Sbjct: 482 ---------------GKTIQSIAFLNHLVSMESCRGPFLIIAPLSTLQHWKRSCEDWTSL 526
Query: 124 NVIVYH 129
N ++Y+
Sbjct: 527 NAVLYY 532
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 147 LEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
+ F V RGPFL+IAPLST+ +W+R E WT LN ++Y+ ++ + R+
Sbjct: 488 IAFLNHLVSMESCRGPFLIIAPLSTLQHWKRSCEDWTSLNAVLYYDQQGQPGRQ 541
>gi|357476459|ref|XP_003608515.1| Chromodomain-helicase-DNA-binding protein, partial [Medicago
truncatula]
gi|355509570|gb|AES90712.1| Chromodomain-helicase-DNA-binding protein, partial [Medicago
truncatula]
Length = 1406
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 140/213 (65%), Gaps = 1/213 (0%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ +R ++++YE + +D + K+ + YKF+VL+T++E++++D + W + I+DE
Sbjct: 818 AKARAIIRQYE-WHASDPSGLNKKTEAYKFNVLLTSYEMVLADYSHFRGVPWEVLIVDEG 876
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN KL L + +HRVLL+GTPLQNN+ E+++LLNFL+P F + AF F
Sbjct: 877 HRLKNSESKLFSLLNSISFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLSAFEERFN 936
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
L + +V++L+ L+ P MLRRLK+D ++I PK E +V VEL++IQ +YYR +L +N+
Sbjct: 937 DLTSAEKVDELKKLVSPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQ 996
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +++N +M+LRK C HPYL+ G
Sbjct: 997 ILRNIGKGIAQQSMLNIVMQLRKVCNHPYLIPG 1029
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 61/118 (51%), Gaps = 19/118 (16%)
Query: 14 SDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+D V L + P +L +QLE LNWL W+ RN ILADEMGLGKTI + C
Sbjct: 717 NDIVNLLEQPKELRGGSLFPHQLEALNWLRKCWYKSRNVILADEMGLGKTISA----CAF 772
Query: 74 ADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
I SL F FK + P LV+ PL T+ NW EF W D+NV+ YH
Sbjct: 773 ---------ISSLYF---EFK--VSRPCLVLVPLVTMGNWLAEFALWAPDVNVVQYHG 816
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F F+ + P LV+ PL T+ NW EF W D+NV+ YHG
Sbjct: 772 FISSLYFEFKVSRPCLVLVPLVTMGNWLAEFALWAPDVNVVQYHG 816
>gi|47227437|emb|CAG04585.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2248
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 137/222 (61%), Gaps = 15/222 (6%)
Query: 298 SRNMLQEYELFF-----RNDKNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F + K F ++ + KFHVL+T++E++ D LK W +
Sbjct: 732 SRAIIRENEFSFDDTAVKAGKKAFKLRREAPIKFHVLLTSYELVTIDQTALKSIEWACLV 791
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P +F+N E F+
Sbjct: 792 VDEAHRLKNNQSKFFRRLNDYKIDHKLLLTGTPLQNNLEELFHLLNFLTPNRFNNLEGFL 851
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQK------KY 465
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QK KY
Sbjct: 852 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKYDTLETKY 911
Query: 466 YRGILERNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
Y+ IL +NF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 912 YKHILTKNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 951
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 79/152 (51%), Gaps = 34/152 (22%)
Query: 17 VKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
+K E+ P V TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 630 IKYEEQPDFVTATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG--------------- 674
Query: 75 DEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFV 133
LGKTIQ++ F+ ++FK G +GPFLV APLSTI NW+REFE W F
Sbjct: 675 ----LGKTIQTIVFLYSLFKEGHTKGPFLVSAPLSTIINWEREFEMWA--------PDFY 722
Query: 134 VLLQTGSKFFRICL---EF-FVDAVFKTGIRG 161
V+ TG K R + EF F D K G +
Sbjct: 723 VVTYTGDKDSRAIIRENEFSFDDTAVKAGKKA 754
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++FK G +GPFLV APLSTI NW+REFE W D V+ Y G
Sbjct: 684 FLYSLFKEGHTKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTG 728
>gi|242000110|ref|XP_002434698.1| chromodomain helicase DNA binding protein, putative [Ixodes
scapularis]
gi|215498028|gb|EEC07522.1| chromodomain helicase DNA binding protein, putative [Ixodes
scapularis]
Length = 1882
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 138/215 (64%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E+E F RN +KD KFHVL+T++E++ D L +W++ +
Sbjct: 794 SRAVIREHEFSFDEKAVRNPNKACRMKKDASVKFHVLLTSYELVCIDATILGSVDWQVLV 853
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K + L + +++LL+GTPLQNN+ ELF LLNFL PQ F++ + F+
Sbjct: 854 VDEAHRLKNNQSKFFKVLNNYKINYKLLLTGTPLQNNLEELFHLLNFLSPQNFNDLQGFL 913
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
+EF L E +V KL LL +LRRLK DV K + K E ++ V+LT +QKKYY+ IL
Sbjct: 914 NEFADLAKEEQVKKLHDLLGCHLLRRLKADVLKGMPSKSEFIIRVDLTPLQKKYYKYILT 973
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RN+ L+ S +V +L+N MM+L+KCC HPYL
Sbjct: 974 RNYEALNAKGGSHSV-SLLNIMMDLKKCCNHPYLF 1007
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 160 RGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
RGPFLV APLSTI NW+REFE W D V+ Y G +
Sbjct: 757 RGPFLVSAPLSTIINWEREFELWAPDFYVVTYIGDK 792
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 98 RGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
RGPFLV APLSTI NW+REFE W D V+ Y
Sbjct: 757 RGPFLVSAPLSTIINWEREFELWAPDFYVVTY 788
>gi|123421883|ref|XP_001306074.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
gi|121887628|gb|EAX93144.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
Length = 1483
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 9/211 (4%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKD-FNWRLCIIDEAHR 357
R L YE F+ + KF+VL+TT+E I + +D F W+ I+DEAHR
Sbjct: 298 RKALLNYEFFYPGTT--------IPKFNVLVTTYEYAIKESKMFEDKFIWQCIIVDEAHR 349
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN KL + E ++LL+GTPL NN EL+SLLNFL+ ++F++ + F +FG L
Sbjct: 350 LKNFESKLTVTMHSYKSEFKLLLTGTPLHNNTQELWSLLNFLDEERFNDIQRFKDKFGVL 409
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
++ +LQ +L P+MLRRLK DVEK++AP EE ++E +T+ Q+ YY+ I +N +L
Sbjct: 410 SDAEQITELQAILHPLMLRRLKGDVEKNLAPLEEVIIECGMTSHQRAYYQSIYSKNMEYL 469
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+G S+N NL N MELRK C HPYL+NG
Sbjct: 470 HRGAHSSNTTNLQNISMELRKVCNHPYLING 500
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 72/122 (59%), Gaps = 20/122 (16%)
Query: 11 PPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
P +D+ + K+ +R+YQLEGLN+ + SW++ +N ILADEMGLGKT
Sbjct: 192 PKPTDFKLITAHDPSKSGKKIRSYQLEGLNFFVNSWYHRKNAILADEMGLGKT------- 244
Query: 71 CILADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
C Q+ F++ + K GI GPF+++APL+TIP+W+RE WTDL VI +
Sbjct: 245 C------------QASIFLNYLHKKQGISGPFIILAPLTTIPHWERELADWTDLKVIAFF 292
Query: 130 AT 131
+
Sbjct: 293 GS 294
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 156 KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKK 196
K GI GPF+++APL+TIP+W+RE WTDL VI + G + K
Sbjct: 257 KQGISGPFIILAPLTTIPHWERELADWTDLKVIAFFGSKDK 297
>gi|47206539|emb|CAF92235.1| unnamed protein product [Tetraodon nigroviridis]
Length = 993
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 137/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ + F +KD KFH+L+T++E+I D L W +
Sbjct: 368 SRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHILLTSYELITIDQAILGSVTWACLV 427
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L + +++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 428 VDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 487
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 488 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKFILT 547
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 548 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 581
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 82/159 (51%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSPVYKN--DNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P +K E P Y N TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 256 PPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG----- 310
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKT+Q++ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 311 --------------LGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA-- 354
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D+ K+G
Sbjct: 355 ------PDFYVVTYTGDKDSRAIIRENEFTFEDSAVKSG 387
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D V+ Y G +
Sbjct: 320 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDK 366
>gi|224004070|ref|XP_002295686.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585718|gb|ACI64403.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 338
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 123/177 (69%), Gaps = 2/177 (1%)
Query: 334 IIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLR--LLHLEHRVLLSGTPLQNNVNE 391
++ D EL +W + ++DEAHRLKN N KL LR +LL+GTP+QNN+ E
Sbjct: 2 LVCDDFWELGAIDWEIMVVDEAHRLKNHNSKLATNLRDDRFRFNQCLLLTGTPIQNNMQE 61
Query: 392 LFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEE 451
L++LLNF+ P F + + FM ++G ++++ +V++L ++P +LRRLKEDVEKS+ PKEE
Sbjct: 62 LWTLLNFINPDGFEDVDEFMEQYGDIRSKEKVDELHETIRPFILRRLKEDVEKSVPPKEE 121
Query: 452 TVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
T++EVELT +QK+YYR + E+N FL +G + P++ N M+LRKCC HP+LL G
Sbjct: 122 TLIEVELTVLQKQYYRALYEKNLKFLHRGKKPLDGPSINNLAMQLRKCCNHPFLLTG 178
>gi|168012021|ref|XP_001758701.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162690311|gb|EDQ76679.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1220
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 141/226 (62%), Gaps = 13/226 (5%)
Query: 294 SASASRNMLQEYELFFRNDKNQFI-----------KEKDLYKFHVLITTFEIIISDCLEL 342
+S +R +L++YE FF ++ ++D KF VL+T++E+I D L
Sbjct: 375 GSSQARAILRQYEFFFPQKSSKKSKDKGKKKMAGESKQDRVKFDVLLTSYEMINLDTAIL 434
Query: 343 KDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQ 402
K W I+DE HRLKN++ KL + L HRVLL+GTPLQNN++ELF L++FL+
Sbjct: 435 KALKWECLIVDEGHRLKNKDSKLFQTLTTFSTRHRVLLTGTPLQNNLDELFMLMHFLDAG 494
Query: 403 QFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQ 462
+F++ E F EF + E +V +L +L P +LRR+K+DV K + PK+E ++ VEL+++Q
Sbjct: 495 KFNSLEEFQQEFQDINQEEQVGRLHKMLAPHLLRRVKKDVLKEMPPKKELILRVELSSLQ 554
Query: 463 KKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
K++Y+ IL +N+ L+K +L N +MELRK C HPYLL G
Sbjct: 555 KEFYKAILTKNYQILAK--QGGPQVSLTNVVMELRKLCGHPYLLEG 598
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 67/115 (58%), Gaps = 20/115 (17%)
Query: 15 DWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
D+ +K+P + +L YQLEGLN+L F+W ++ ILA
Sbjct: 278 DFKPFKKTPKFLIGGSLHPYQLEGLNFLRFAW-------------------EQNKHVILA 318
Query: 75 DEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVY 128
DEMGLGKTIQS++ + ++ + + P LV+APLST+ NW+REF W +NV++Y
Sbjct: 319 DEMGLGKTIQSISLLGSLVEENVGLPHLVVAPLSTLRNWEREFATWCPQMNVVMY 373
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 162 PFLVIAPLSTIPNWQREFEAW-TDLNVIVYHG 192
P LV+APLST+ NW+REF W +NV++Y G
Sbjct: 344 PHLVVAPLSTLRNWEREFATWCPQMNVVMYVG 375
>gi|168057891|ref|XP_001780945.1| SNF2 family chromodomain-helicase [Physcomitrella patens subsp.
patens]
gi|162667579|gb|EDQ54205.1| SNF2 family chromodomain-helicase [Physcomitrella patens subsp.
patens]
Length = 1677
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 140/214 (65%), Gaps = 10/214 (4%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R +++ YE ++ + + +K F++L+T+FEI++ D +L W+ I+DEAHRL
Sbjct: 627 RQIIRNYEFYYGDGNSSELK------FNILLTSFEILMKDQNKLARETWQYIIVDEAHRL 680
Query: 359 KNRNCKLLEGLRLLHLEHR--VLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
K+R K + LR L + H +LL+GTP+QNN ELFSLL L+ +F + E F+ ++G
Sbjct: 681 KSRESKTAQALRQLRVRHGGLLLLTGTPVQNNTKELFSLLYLLDRNEFDSEEDFLLKYGD 740
Query: 417 LKTESEVNKLQL-LLKPMMLRRLKEDVEKSIAPKEE-TVVEVELTNIQKKYYRGILERNF 474
+K ++ LQ +L+P +LRR+KEDVEKSI KEE T+V VELT Q+ +YR I E N
Sbjct: 741 IKAAEQIKDLQDNILRPRLLRRMKEDVEKSIPMKEEVTIVWVELTKEQRAFYRAIYENNI 800
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
S L KG+ + N+P+L N MELRK C HP+L +G
Sbjct: 801 STLLKGSIATNMPSLRNVAMELRKLCNHPFLCDG 834
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 65/105 (61%), Gaps = 18/105 (17%)
Query: 24 VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTI 83
V+K+ LR YQ G+ WL ++ N NCILADEMGLGKTIQS+ +
Sbjct: 534 VFKDGRRLRDYQEAGVAWLDHNFKNRTNCILADEMGLGKTIQSVA-------------ML 580
Query: 84 QSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
++L K IRGPFLV+AP+ST+ +W+RE E+ TD+N +VY
Sbjct: 581 ENLR-----TKRKIRGPFLVVAPVSTLGHWRREVESATDMNCVVY 620
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 30/37 (81%)
Query: 156 KTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
K IRGPFLV+AP+ST+ +W+RE E+ TD+N +VY G
Sbjct: 586 KRKIRGPFLVVAPVSTLGHWRREVESATDMNCVVYTG 622
>gi|351713762|gb|EHB16681.1| Chromodomain-helicase-DNA-binding protein 5 [Heterocephalus glaber]
Length = 2263
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 137/216 (63%), Gaps = 11/216 (5%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 1012 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 1071
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P+ N E F+
Sbjct: 1072 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPE--XNLEGFL 1129
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 1130 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 1189
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 1190 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1223
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 898 EKPPDTPIVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 954
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 955 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 998
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 999 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 1031
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 964 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 1014
>gi|168051599|ref|XP_001778241.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162670338|gb|EDQ56908.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1245
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 141/226 (62%), Gaps = 13/226 (5%)
Query: 294 SASASRNMLQEYELFFRNDKNQFI-----------KEKDLYKFHVLITTFEIIISDCLEL 342
+S +R +L++YE FF ++ ++D KF VL+T++E+I D L
Sbjct: 375 GSSQARAILRQYEFFFPQKSSKKSKDKGKKKMAGESKQDRVKFDVLLTSYEMINLDTTIL 434
Query: 343 KDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQ 402
K W I+DE HRLKN++ KL + L HRVLL+GTPLQNN++ELF L++FL+
Sbjct: 435 KALKWECLIVDEGHRLKNKDSKLFQTLTTFSTRHRVLLTGTPLQNNLDELFMLMHFLDAG 494
Query: 403 QFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQ 462
+F++ E F EF + E +V +L +L P +LRR+K+DV K + PK+E ++ VEL+++Q
Sbjct: 495 KFNSLEEFQQEFQDINQEEQVGRLHKMLAPHLLRRVKKDVLKEMPPKKELILRVELSSLQ 554
Query: 463 KKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
K++Y+ IL +N+ L+K +L N +MELRK C HPYLL G
Sbjct: 555 KEFYKAILTKNYQILAK--QGGPQVSLTNVVMELRKLCGHPYLLEG 598
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 67/115 (58%), Gaps = 20/115 (17%)
Query: 15 DWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
D+ +K+P + +L YQLEGLN+L F+W ++ ILA
Sbjct: 278 DFKPFKKTPKFLVGGSLHPYQLEGLNFLRFAW-------------------EQNKHVILA 318
Query: 75 DEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
DEMGLGKTIQS++ + ++ + + P LV+APLST+ NW+REF W +NV++Y
Sbjct: 319 DEMGLGKTIQSISLLGSLIEENVGLPHLVVAPLSTLRNWEREFATWCPQMNVVMY 373
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 162 PFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
P LV+APLST+ NW+REF W +NV++Y G
Sbjct: 344 PHLVVAPLSTLRNWEREFATWCPQMNVVMYVG 375
>gi|432860089|ref|XP_004069385.1| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like [Oryzias
latipes]
Length = 2111
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 130/203 (64%), Gaps = 5/203 (2%)
Query: 305 YELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCK 364
Y + + DK+ ++ KFHVL+T++E+I D L +W ++DEAHRLKN K
Sbjct: 936 YVVTYTGDKDS--RKDTPIKFHVLLTSYELITIDQAILGSISWACLVVDEAHRLKNNQSK 993
Query: 365 LLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVN 424
L + +++LL+GTPLQNN+ ELF LLNFL P +F+N E F+ EF + E ++
Sbjct: 994 FFRILNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPDRFNNLEGFLEEFADISKEDQIK 1053
Query: 425 KLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL-SKGTTS 483
KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL RNF L SKG
Sbjct: 1054 KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKFILTRNFEALNSKG--G 1111
Query: 484 ANVPNLMNTMMELRKCCIHPYLL 506
N +L+N MM+L+KCC HPYL
Sbjct: 1112 GNQVSLLNIMMDLKKCCNHPYLF 1134
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 86/180 (47%), Gaps = 26/180 (14%)
Query: 7 PKKKPPASDWVKLEKSPVYKN--DNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P +K E P Y N TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 834 PPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG----- 888
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
LGKT+Q++ F+ +++K G +GPFLV APLSTI NW+REFE W D
Sbjct: 889 --------------LGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPD 934
Query: 123 LNVIVYHATFVVLLQTGSKFFRICLEF---FVDAVFKTGIRGPFLVIAPLSTIPNWQREF 179
V+ Y T KF + + +D I LV+ + N Q +F
Sbjct: 935 FYVVTYTGDKDSRKDTPIKFHVLLTSYELITIDQAILGSISWACLVVDEAHRLKNNQSKF 994
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 4/54 (7%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRD 201
F+ +++K G +GPFLV APLSTI NW+REFE W D V+ Y G K SR+D
Sbjct: 898 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTG--DKDSRKD 949
>gi|321479460|gb|EFX90416.1| hypothetical protein DAPPUDRAFT_232072 [Daphnia pulex]
Length = 2083
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 136/214 (63%), Gaps = 6/214 (2%)
Query: 298 SRNMLQEYELFFRNDK----NQFIK-EKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
SR +++E+EL F N+ K + KFHVL+T++E++ D L W + ++
Sbjct: 907 SRVVIREHELSFEEGAVRGGNKACKIRTNSVKFHVLLTSYELVSIDAALLNSIEWAVLVV 966
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLKN K L +L +++LL+GTPLQNN+ ELF LLNFL P +F++ AF +
Sbjct: 967 DEAHRLKNNQSKFFRILNSYNLRYKLLLTGTPLQNNLEELFHLLNFLCPDKFNDLLAFTN 1026
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF L E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ +L R
Sbjct: 1027 EFADLAKEEQVKRLHDMLGPHMLRRLKADVLKNMPTKSEFIVRVELSPMQKKYYKYVLTR 1086
Query: 473 NFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
NF L+ T V +L+N MM+L+KCC HPYL
Sbjct: 1087 NFEALNSRTGGQQV-SLLNIMMDLKKCCNHPYLF 1119
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 83/158 (52%), Gaps = 30/158 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP ++ K E+ P Y + + L YQ+EGLNWL +SW G + ILADEMGL
Sbjct: 795 PPEKPISNLSRKWERQPEYIDASGMALHPYQMEGLNWLRYSWGQGTDTILADEMGL---- 850
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
GKTIQ++TF+ +++K G RGPFLV PLSTI NW+REFE W
Sbjct: 851 ---------------GKTIQTITFLYSLYKEGHCRGPFLVAVPLSTIINWEREFETWA-- 893
Query: 124 NVIVYHATFVVLLQTGSKFFRICLEFFVDAVFKTGIRG 161
F V+ G K R+ + + + +RG
Sbjct: 894 ------PDFYVVTYVGDKDSRVVIREHELSFEEGAVRG 925
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV PLSTI NW+REFE W D V+ Y G +
Sbjct: 859 FLYSLYKEGHCRGPFLVAVPLSTIINWEREFETWAPDFYVVTYVGDK 905
>gi|410919217|ref|XP_003973081.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 5-like [Takifugu rubripes]
Length = 1982
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 137/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ + F +KD KFH+L+T++E+I D L W +
Sbjct: 771 SRAIIRENEFTFEDSAVKSGRKVFRMKKDTPIKFHILLTSYELITIDQAILGSVTWACLV 830
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L + +++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 831 VDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 890
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 891 EEFADISKEDQIKKLHDVLGPHMLRRLKVDVFKNMPAKTELIVRVELSPMQKKYYKFILT 950
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 951 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 984
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/159 (42%), Positives = 82/159 (51%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSPVYKN--DNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P +K E P Y N TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 659 PPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG----- 713
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKT+Q++ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 714 --------------LGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA-- 757
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D+ K+G
Sbjct: 758 ------PDFYVVTYTGDKDSRAIIRENEFTFEDSAVKSG 790
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D V+ Y G +
Sbjct: 723 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDK 769
>gi|291233670|ref|XP_002736775.1| PREDICTED: kismet-like [Saccoglossus kowalevskii]
Length = 1063
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 86/133 (64%), Positives = 106/133 (79%), Gaps = 2/133 (1%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ SR M+QEYE++F N+K Q I ++YKF VL+TT+EII++D L WR +IDE
Sbjct: 924 SATSRRMIQEYEMYFNNEKGQRIP--NIYKFQVLVTTYEIILADNDLLSQIEWRCVVIDE 981
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN+NCKLLEGLRLL+ EHRVLL+GTPLQNNV ELFSLLNFLEP +F + AF+ EF
Sbjct: 982 AHRLKNKNCKLLEGLRLLNFEHRVLLTGTPLQNNVEELFSLLNFLEPDRFGSLSAFLQEF 1041
Query: 415 GQLKTESEVNKLQ 427
G LKTES+V KLQ
Sbjct: 1042 GDLKTESQVEKLQ 1054
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 91/137 (66%), Gaps = 21/137 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++P A +W KL K+ YK N LR YQLEG+NWL FSW+NG+NCILA
Sbjct: 821 ERPGADEWEKLPKTKTYKEGNYLREYQLEGVNWLTFSWYNGQNCILA------------- 867
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
DEMGLGKTIQS+ F+ V++ GI+GPFL+IAPLSTI NWQREFE W+++N +V+
Sbjct: 868 ------DEMGLGKTIQSIAFLLEVWEYGIKGPFLIIAPLSTIANWQREFETWSNVNCVVH 921
Query: 129 H--ATFVVLLQTGSKFF 143
H AT ++Q +F
Sbjct: 922 HGSATSRRMIQEYEMYF 938
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ V++ GI+GPFL+IAPLSTI NWQREFE W+++N +V+HG SRR
Sbjct: 881 FLLEVWEYGIKGPFLIIAPLSTIANWQREFETWSNVNCVVHHG--SATSRR 929
>gi|255548778|ref|XP_002515445.1| chromodomain helicase DNA binding protein, putative [Ricinus
communis]
gi|223545389|gb|EEF46894.1| chromodomain helicase DNA binding protein, putative [Ricinus
communis]
Length = 1470
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 144/224 (64%), Gaps = 12/224 (5%)
Query: 295 ASASRNMLQEYELFF--------RNDKNQFIKE--KDLYKFHVLITTFEIIISDCLELKD 344
++ +R +++EYE ++ + Q + E +D KF VL+T++E+I D LK
Sbjct: 364 SAQARTVIREYEFYYPKSHKKIKKKKSGQVVGESKQDRIKFDVLLTSYEMINLDTTSLKP 423
Query: 345 FNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQF 404
W I+DE HRLKN++ KL L+ HRVLL+GTPLQNN++ELF L++FL+ +F
Sbjct: 424 IKWECMIVDEGHRLKNKDSKLFLSLKQYSSNHRVLLTGTPLQNNLDELFMLMHFLDAGKF 483
Query: 405 SNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKK 464
++ E F EF + E ++++L +L P +LRR+K+DV + PK+E ++ VEL++ QK+
Sbjct: 484 ASLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMTELPPKKELILRVELSSKQKE 543
Query: 465 YYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
YY+ IL RN+ L++ A + +L+N +MELRK C HPY+L G
Sbjct: 544 YYKAILTRNYQILTR-RGGAQI-SLINVVMELRKLCCHPYMLEG 585
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 72/128 (56%), Gaps = 21/128 (16%)
Query: 2 SLIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
SL K + ++ + E+SP + +L YQLEGLN+L FSW + ILADEMGL
Sbjct: 254 SLKDATDSKKKSKEFQQYEQSPEFLTGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGL- 312
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT 121
GKTIQS+ F+ ++F+ + P LV+APLST+ NW+REF W
Sbjct: 313 ------------------GKTIQSIAFLASLFEESL-SPHLVVAPLSTLRNWEREFATWA 353
Query: 122 -DLNVIVY 128
LNV++Y
Sbjct: 354 PQLNVVMY 361
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++F+ + P LV+APLST+ NW+REF W LNV++Y G
Sbjct: 321 FLASLFEESL-SPHLVVAPLSTLRNWEREFATWAPQLNVVMYVG 363
>gi|357466053|ref|XP_003603311.1| Chromatin remodeling complex subunit [Medicago truncatula]
gi|355492359|gb|AES73562.1| Chromatin remodeling complex subunit [Medicago truncatula]
Length = 1483
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 143/222 (64%), Gaps = 10/222 (4%)
Query: 295 ASASRNMLQEYELFF------RNDKNQFIKEK--DLYKFHVLITTFEIIISDCLELKDFN 346
++ +R++++EYE +F K + E D KF VL+T++E+I D LK
Sbjct: 372 SAQARSVIREYEFYFPKKLKKNKKKKSLVSESKHDRIKFDVLLTSYEMINLDTTSLKPIK 431
Query: 347 WRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSN 406
W I+DE HRLKN++ KL L+ HRVLL+GTPLQNN++ELF L++FL+ +F++
Sbjct: 432 WECMIVDEGHRLKNKDSKLFSSLKQYSTRHRVLLTGTPLQNNLDELFMLMHFLDAGKFAS 491
Query: 407 NEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYY 466
E F EF + E ++++L +L P +LRR+K+DV K + PK+E ++ V+L++ QK+YY
Sbjct: 492 LEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVDLSSKQKEYY 551
Query: 467 RGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+ IL RN+ L++ A + +L+N +MELRK C H Y+L G
Sbjct: 552 KAILTRNYQILTR-RGGAQI-SLINVVMELRKLCCHAYMLEG 591
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 67/113 (59%), Gaps = 21/113 (18%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+ E SP + + +L YQLEGLN+L FSW + ILADEMGL
Sbjct: 276 QYEHSPEFLSGGSLHPYQLEGLNFLRFSWSKQTHVILADEMGL----------------- 318
Query: 78 GLGKTIQSLTFVDAVFKTGIRG-PFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GKTIQS+ F+ ++F+ G+ P LV+APLST+ NW+REF W +NVI+Y
Sbjct: 319 --GKTIQSIAFLASLFEEGVSAHPHLVVAPLSTLRNWEREFATWAPQMNVIMY 369
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRG-PFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ ++F+ G+ P LV+APLST+ NW+REF W +NVI+Y G + S
Sbjct: 327 FLASLFEEGVSAHPHLVVAPLSTLRNWEREFATWAPQMNVIMYVGSAQARS 377
>gi|393911013|gb|EJD76123.1| LET-418 protein [Loa loa]
Length = 1755
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 130/215 (60%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFF------RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E+E F K +K KFHVL+T++E+I D L W +
Sbjct: 622 SRTVIREHEFSFIEGAVRGGPKPSRLKTDQGIKFHVLLTSYELINIDKSILSSIEWAGLV 681
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN LR + +R+LL+GTPLQNN+ ELF LLNFL P +F + ++F
Sbjct: 682 VDEAHRLKNNQSLFFRTLRDFRINYRLLLTGTPLQNNLEELFHLLNFLSPDRFYDMDSFT 741
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF ++ E ++ KL LL P MLRRLK DV + K E +V VEL+ +QKKYY+ IL
Sbjct: 742 HEFAEISKEDQIQKLHSLLGPHMLRRLKADVLSGMPSKSELIVRVELSPMQKKYYKNILT 801
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF LS + + +L+N +M+L+KCC HPYL
Sbjct: 802 RNFEALSPKGGGSQI-SLINIIMDLKKCCNHPYLF 835
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 62/115 (53%), Gaps = 23/115 (20%)
Query: 18 KLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
K E P + + L YQLEG+NWL W G + ILADEMGL
Sbjct: 521 KYETQPDFITETGGKLHDYQLEGINWLRHCWSQGTDAILADEMGL--------------- 565
Query: 76 EMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVY 128
GKTIQS+ F+ ++ K G RGPFLV APLST+ NW+RE E W D V+ Y
Sbjct: 566 ----GKTIQSMVFLYSLVKEGHTRGPFLVAAPLSTLINWEREAEFWCPDFYVVTY 616
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
F+ ++ K G RGPFLV APLST+ NW+RE E W D V+ Y G +
Sbjct: 574 FLYSLVKEGHTRGPFLVAAPLSTLINWEREAEFWCPDFYVVTYVGDK 620
>gi|405972247|gb|EKC37026.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
[Crassostrea gigas]
Length = 2123
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 134/215 (62%), Gaps = 10/215 (4%)
Query: 299 RNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
R++++E+E F + K +K KFHVL+T++E+I D L +W + ++
Sbjct: 767 RSVIREHEFSFEENAIRSGAKASKLKSDCQVKFHVLLTSYELISIDSACLGSVDWAVLVV 826
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLKN K L + +++LL+GTPLQNN+ ELF LLNFL P +F++ F+
Sbjct: 827 DEAHRLKNNQSKFFRILSNYKIGYKLLLTGTPLQNNLEELFHLLNFLSPDKFNDLTVFLD 886
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF + E +V KL +L P +LRRLK DV K + K E +V VEL+ +QKKYY+ IL R
Sbjct: 887 EFADIAKEDQVKKLHDMLGPHLLRRLKADVLKGMPSKSEFIVRVELSPMQKKYYKYILTR 946
Query: 473 NFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
NF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 947 NFDALNSKG---GNQVSLLNIMMDLKKCCNHPYLF 978
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 73/129 (56%), Gaps = 23/129 (17%)
Query: 4 IKKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
+K P P K EK P Y TL YQLEG+NWL +SW NG + ILADEMGL
Sbjct: 651 VKMPPSYPSTDLRKKWEKQPAYIDATGGTLHPYQLEGVNWLRYSWSNGTDTILADEMGL- 709
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW 120
GKTIQ++ F+ ++++ G +GPFLV APLSTI NW+REFE W
Sbjct: 710 ------------------GKTIQTIVFLQSLYQEGHSKGPFLVSAPLSTIINWEREFEFW 751
Query: 121 T-DLNVIVY 128
DL V+ Y
Sbjct: 752 APDLYVVTY 760
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ ++++ G +GPFLV APLSTI NW+REFE W DL V+ Y G +
Sbjct: 718 FLQSLYQEGHSKGPFLVSAPLSTIINWEREFEFWAPDLYVVTYIGDK 764
>gi|402590896|gb|EJW84826.1| chromodomain-helicase-DNA-binding protein 4 [Wuchereria bancrofti]
Length = 1519
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 130/215 (60%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFF------RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E+E F K +K KFHVL+T++E+I D L W +
Sbjct: 622 SRTVIREHEFSFIEGAVRGGPKPSRLKTDQGIKFHVLLTSYELINIDKSILSSIEWAGLV 681
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN LR + +R+LL+GTPLQNN+ ELF LLNFL P +F + ++F
Sbjct: 682 VDEAHRLKNNQSLFFRTLRDFRINYRLLLTGTPLQNNLEELFHLLNFLSPDRFYDMDSFT 741
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF ++ E ++ KL LL P MLRRLK DV + K E +V VEL+ +QKKYY+ IL
Sbjct: 742 HEFAEISKEDQIQKLHSLLGPHMLRRLKADVLSGMPSKSELIVRVELSPMQKKYYKNILT 801
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF LS + + +L+N +M+L+KCC HPYL
Sbjct: 802 RNFEALSPKGGGSQI-SLINIIMDLKKCCNHPYLF 835
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 62/115 (53%), Gaps = 23/115 (20%)
Query: 18 KLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
K E P + + L YQLEG+NWL W G + ILADEMGL
Sbjct: 521 KYETQPDFITETGGKLHDYQLEGINWLRHCWSQGTDAILADEMGL--------------- 565
Query: 76 EMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GKTIQS+ F+ ++ K G RGPFLV APLST+ NW+RE E W D V+ Y
Sbjct: 566 ----GKTIQSMVFLYSLVKEGHTRGPFLVAAPLSTLINWEREAEFWCPDFYVVTY 616
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ ++ K G RGPFLV APLST+ NW+RE E W D V+ Y G +
Sbjct: 574 FLYSLVKEGHTRGPFLVAAPLSTLINWEREAEFWCPDFYVVTYVGDK 620
>gi|412992287|emb|CCO20000.1| unnamed protein product [Bathycoccus prasinos]
Length = 1756
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 123/199 (61%), Gaps = 14/199 (7%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
+ V++TT+E++ D L W ++DEAH+LKN KL L L + +LL+GT
Sbjct: 495 RADVVLTTYEMVNFDKNALGKIEWSAVVVDEAHKLKNSEGKLFNELSLFKKQKTLLLTGT 554
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVE 443
PLQNNV EL+SLL F++PQ+F+ E F FG + T + V+ L +LKP +LRRLK DVE
Sbjct: 555 PLQNNVGELWSLLKFVDPQRFAEREKFEKVFGNISTANHVDALHAVLKPYLLRRLKTDVE 614
Query: 444 KSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLM------------- 490
+ + P+ ET+VE EL +QKK YR + ERNFSFLS + S + M
Sbjct: 615 QKLPPRVETLVECELAPLQKKCYRALFERNFSFLSSASGSDDATISMKEEENGENALSMF 674
Query: 491 -NTMMELRKCCIHPYLLNG 508
N MME+RKCC HP+LL+G
Sbjct: 675 RNVMMEVRKCCQHPFLLDG 693
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 59/107 (55%), Gaps = 22/107 (20%)
Query: 28 DNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLT 87
D LR YQ EG+ W+ ++ GR CILADEMGLGKT Q++
Sbjct: 381 DFILREYQAEGVKWITSNFHAGRP------------------GCILADEMGLGKTAQAIN 422
Query: 88 FVDAVFKTGIRG--PFLVIAPLSTIPNWQREFEAW-TDLNVIVYHAT 131
++ V + +R P LV+APLST+ NW+RE + W LNV+VY T
Sbjct: 423 VLEVVCER-VRPDLPTLVVAPLSTLVNWERECQTWIPHLNVVVYSGT 468
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 162 PFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRKKLSR-RDK 202
P LV+APLST+ NW+RE + W LNV+VY G K + RDK
Sbjct: 436 PTLVVAPLSTLVNWERECQTWIPHLNVVVYSGTAKARAEIRDK 478
>gi|123477045|ref|XP_001321692.1| SNF2 family N-terminal domain containing protein [Trichomonas
vaginalis G3]
gi|121904523|gb|EAY09469.1| SNF2 family N-terminal domain containing protein [Trichomonas
vaginalis G3]
Length = 1425
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 131/213 (61%), Gaps = 3/213 (1%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
++ ++Q YEL + +++ + V+IT +E +SD + WR ++DE HR
Sbjct: 334 AKEVIQRYELCKIENG---VRDTEKLNCEVVITNYETFMSDFEIFRRVEWRYLVLDEGHR 390
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN K L+ L +H LL+GTP+QNNV EL+SLL+ L+P+ F + AF+ EFGQ+
Sbjct: 391 LKNHQSKCYGLLQQLSYKHCTLLTGTPIQNNVEELWSLLHLLQPELFDDLPAFLQEFGQI 450
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ LQ ++KP +LRR K DVE +IA KEET+++VELT QK +YR L+ N L
Sbjct: 451 DNAQTLQNLQQVIKPFLLRRKKSDVETTIAAKEETIIQVELTRTQKTFYRAFLDENRDVL 510
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNGKT 510
TS +P+L N MM+LRK C HPYL+ G T
Sbjct: 511 LSQITSGALPSLKNLMMQLRKVCNHPYLIKGAT 543
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 74/115 (64%), Gaps = 18/115 (15%)
Query: 16 WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
+ K+E K NTLR YQL+GLNWL + W+N N ILADEMGLGKT+Q +T
Sbjct: 234 YTKIETPLEDKRGNTLRDYQLQGLNWLRYCWYNHYNSILADEMGLGKTVQLVT------- 286
Query: 76 EMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
T ++ +GIRGP+LV+APLST+ +W++EF+ W+DLNVIVYH
Sbjct: 287 -----------TLIEVSKASGIRGPYLVLAPLSTLHHWEKEFQNWSDLNVIVYHG 330
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 13/71 (18%)
Query: 157 TGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG--------RRKKLSR-----RDKE 203
+GIRGP+LV+APLST+ +W++EF+ W+DLNVIVYHG +R +L + RD E
Sbjct: 295 SGIRGPYLVLAPLSTLHHWEKEFQNWSDLNVIVYHGCPLAKEVIQRYELCKIENGVRDTE 354
Query: 204 RLRLKYVAADY 214
+L + V +Y
Sbjct: 355 KLNCEVVITNY 365
>gi|312077956|ref|XP_003141528.1| CHromoDomain protein family member [Loa loa]
Length = 1696
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 130/215 (60%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFF------RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E+E F K +K KFHVL+T++E+I D L W +
Sbjct: 563 SRTVIREHEFSFIEGAVRGGPKPSRLKTDQGIKFHVLLTSYELINIDKSILSSIEWAGLV 622
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN LR + +R+LL+GTPLQNN+ ELF LLNFL P +F + ++F
Sbjct: 623 VDEAHRLKNNQSLFFRTLRDFRINYRLLLTGTPLQNNLEELFHLLNFLSPDRFYDMDSFT 682
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF ++ E ++ KL LL P MLRRLK DV + K E +V VEL+ +QKKYY+ IL
Sbjct: 683 HEFAEISKEDQIQKLHSLLGPHMLRRLKADVLSGMPSKSELIVRVELSPMQKKYYKNILT 742
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF LS + + +L+N +M+L+KCC HPYL
Sbjct: 743 RNFEALSPKGGGSQI-SLINIIMDLKKCCNHPYLF 776
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 62/115 (53%), Gaps = 23/115 (20%)
Query: 18 KLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
K E P + + L YQLEG+NWL W G + ILADEMGL
Sbjct: 462 KYETQPDFITETGGKLHDYQLEGINWLRHCWSQGTDAILADEMGL--------------- 506
Query: 76 EMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVY 128
GKTIQS+ F+ ++ K G RGPFLV APLST+ NW+RE E W D V+ Y
Sbjct: 507 ----GKTIQSMVFLYSLVKEGHTRGPFLVAAPLSTLINWEREAEFWCPDFYVVTY 557
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
F+ ++ K G RGPFLV APLST+ NW+RE E W D V+ Y G +
Sbjct: 515 FLYSLVKEGHTRGPFLVAAPLSTLINWEREAEFWCPDFYVVTYVGDK 561
>gi|443719422|gb|ELU09603.1| hypothetical protein CAPTEDRAFT_166178 [Capitella teleta]
Length = 1711
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 135/215 (62%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E+E F R F KD KF VL+T++E+I D L +W + +
Sbjct: 588 SRAVIREHEFSFEEGAIRGGNKAFKMRKDSGVKFQVLLTSYELICIDQATLGSVDWSVLV 647
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L+ ++ +++LL+GTPLQNN+ ELF LLNFL+ +QF + F+
Sbjct: 648 VDEAHRLKNNQSKFFRILQSYNIGYKLLLTGTPLQNNLEELFHLLNFLDSKQFGHMTTFL 707
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P +LRRLK DV K++ K E +V VEL +Q+KYY+ IL
Sbjct: 708 EEFADISKEDQIKKLHEVLGPHLLRRLKADVLKNMPSKSEFIVRVELNPMQRKYYKYILT 767
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ T S V +L+N MM+L+KCC HPYL
Sbjct: 768 RNFEALNSRTGSNQV-SLLNIMMDLKKCCNHPYLF 801
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 66/115 (57%), Gaps = 23/115 (20%)
Query: 18 KLEKSPVYKND--NTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
KLE P Y ++ L YQLEGLNWL SW + ILADEMGL
Sbjct: 487 KLEVQPKYFDEVGGKLHDYQLEGLNWLRHSWNQHTDTILADEMGL--------------- 531
Query: 76 EMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GKTIQ++ F+ ++++ G GPFLV APLSTI NW+REFE W DL V+ Y
Sbjct: 532 ----GKTIQTIAFLRSLYREGHTAGPFLVSAPLSTIINWEREFEFWAPDLYVVTY 582
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ ++++ G GPFLV APLSTI NW+REFE W DL V+ Y G +
Sbjct: 540 FLRSLYREGHTAGPFLVSAPLSTIINWEREFEFWAPDLYVVTYVGDK 586
>gi|195354154|ref|XP_002043565.1| GM19418 [Drosophila sechellia]
gi|194127733|gb|EDW49776.1| GM19418 [Drosophila sechellia]
Length = 882
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/438 (30%), Positives = 215/438 (49%), Gaps = 65/438 (14%)
Query: 125 VIVYHATFVVLLQTGSKFFRICLEFFVDA-------VFKTGIRGPFLVIAPL---STIPN 174
++++HAT V Q S CLE D ++ GI+ +LV+ + S PN
Sbjct: 134 MLLHHATMVASFQRKSDMEEPCLEELEDQECDLHERFYRYGIKPEWLVVQRVINHSKEPN 193
Query: 175 ------------------WQREFEAWTDLN--VIVYHGRRKKLSRRDKER------LRLK 208
W++E ++ LN + +Y +R R K+R L K
Sbjct: 194 GSTIYLVKWRELSYNESSWEKENDSIPGLNQAIALYKKQRSSNKGRPKDRPAPTIDLNKK 253
Query: 209 YVAADYVPKDGEVLYGNWSRSECFKVER-GLLTFGWGRWKEFLANNEFRNGWTEEYVEEL 267
Y K+G + + F++E L + WG+ + +E G T + V L
Sbjct: 254 YEDQPVFLKEGGL------KLHPFQMEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFL 307
Query: 268 ARLLDLAGGDG------------------KSFSPTMSSGTDGLKSASASRNMLQEYELFF 309
L G + ++P + T +R +++++EL F
Sbjct: 308 YSLFKEGHCRGPFLISVPLSTLPNWERELELWAPELYCVT--YVGGKTARAVIRKHELSF 365
Query: 310 RNDKNQFIKE-KDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ ++E + YKF+V++ ++E I D + L +W ++DEAHRL++ K
Sbjct: 366 EEVTTKTMRENQTQYKFNVMLASYEFISLDAVFLGSIDWAALVVDEAHRLRSNQSKFFRI 425
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQL 428
L + +++LL+GTPLQNN+ ELF LLNFL +F++ + F +EF + E +V +L
Sbjct: 426 LSRYRIAYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFTDVSKEEQVKRLHE 485
Query: 429 LLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPN 488
+L+P MLRRLK DV KS+ PK E +V VEL+++QKK+Y+ IL +NF L++ V +
Sbjct: 486 ILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKALNQ-KGGGRVCS 544
Query: 489 LMNTMMELRKCCIHPYLL 506
L+N MM+LRKCC HPYL
Sbjct: 545 LLNIMMDLRKCCNHPYLF 562
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 25/129 (19%)
Query: 6 KPKKKP-PASDW-VKLEKSPVYKNDNTLR--AYQLEGLNWLMFSWFNGRNCILADEMGLG 61
+PK +P P D K E PV+ + L+ +Q+EG++WL +SW G ILADEMGL
Sbjct: 239 RPKDRPAPTIDLNKKYEDQPVFLKEGGLKLHPFQMEGVSWLRYSWGQGIPTILADEMGL- 297
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW 120
GKTIQ++ F+ ++FK G RGPFL+ PLST+PNW+RE E W
Sbjct: 298 ------------------GKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLPNWERELELW 339
Query: 121 T-DLNVIVY 128
+L + Y
Sbjct: 340 APELYCVTY 348
>gi|170592228|ref|XP_001900871.1| CHD4 protein [Brugia malayi]
gi|158591738|gb|EDP30342.1| CHD4 protein, putative [Brugia malayi]
Length = 1846
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 130/215 (60%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFF------RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E+E F K +K KFHVL+T++E+I D L W +
Sbjct: 708 SRTVIREHEFSFIEGAVRGGPKPSRLKTDQGIKFHVLLTSYELINIDKSILSSIEWAGLV 767
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN LR + +R+LL+GTPLQNN+ ELF LLNFL P +F + ++F
Sbjct: 768 VDEAHRLKNNQSLFFRTLRDFRINYRLLLTGTPLQNNLEELFHLLNFLSPDRFYDMDSFT 827
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF ++ E ++ KL LL P MLRRLK DV + K E +V VEL+ +QKKYY+ IL
Sbjct: 828 HEFAEISKEDQIQKLHSLLGPHMLRRLKADVLSGMPSKSELIVRVELSPMQKKYYKNILT 887
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF LS + + +L+N +M+L+KCC HPYL
Sbjct: 888 RNFEALSPKGGGSQI-SLINIIMDLKKCCNHPYLF 921
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 62/115 (53%), Gaps = 23/115 (20%)
Query: 18 KLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
K E P + + L YQLEG+NWL W G + ILADEMGL
Sbjct: 607 KYETQPDFITETGGKLHDYQLEGINWLRHCWSQGTDAILADEMGL--------------- 651
Query: 76 EMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVY 128
GKTIQS+ F+ ++ K G RGPFLV APLST+ NW+RE E W D V+ Y
Sbjct: 652 ----GKTIQSMVFLYSLVKEGHTRGPFLVAAPLSTLINWEREAEFWCPDFYVVTY 702
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
F+ ++ K G RGPFLV APLST+ NW+RE E W D V+ Y G +
Sbjct: 660 FLYSLVKEGHTRGPFLVAAPLSTLINWEREAEFWCPDFYVVTYVGDK 706
>gi|224092566|ref|XP_002309665.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222855641|gb|EEE93188.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1340
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 144/224 (64%), Gaps = 12/224 (5%)
Query: 295 ASASRNMLQEYELFF--------RNDKNQFIKE--KDLYKFHVLITTFEIIISDCLELKD 344
++ +R +++EYE ++ + Q + E +D KF VL+T++E+I D LK
Sbjct: 372 SAQARAVIREYEFYYPKNHKKIKKKKSGQVVTESKQDRIKFDVLLTSYEMINLDSTSLKP 431
Query: 345 FNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQF 404
W I+DE HRLKN++ KL L+ HRVLL+GTPLQNN++ELF L++FL+ +F
Sbjct: 432 IKWECMIVDEGHRLKNKDSKLFLSLKQYCSNHRVLLTGTPLQNNLDELFMLMHFLDAGKF 491
Query: 405 SNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKK 464
++ E F EF + E ++ +L +L P +LRR+K+DV K + PK+E ++ +EL++ QK+
Sbjct: 492 ASLEEFQEEFKDINQEEQILRLHKMLAPHLLRRVKKDVMKELPPKKELILRIELSSKQKE 551
Query: 465 YYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
YY+ IL RN+ L++ A + +L+N +MELRK C HPY+L G
Sbjct: 552 YYKAILTRNYQILTR-RGGAQI-SLINVVMELRKLCCHPYMLEG 593
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 62/102 (60%), Gaps = 21/102 (20%)
Query: 28 DNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLT 87
+ +L YQLEGLN+L FSW + ILADEMGL GKTIQS+
Sbjct: 288 EGSLHPYQLEGLNFLRFSWSKQTHVILADEMGL-------------------GKTIQSIA 328
Query: 88 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
F+ ++ + GI P+LV+APLST+ NW+REF W +NV++Y
Sbjct: 329 FLASLREEGI-SPYLVVAPLSTLRNWEREFATWAPQMNVVMY 369
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++ + GI P+LV+APLST+ NW+REF W +NV++Y G
Sbjct: 329 FLASLREEGI-SPYLVVAPLSTLRNWEREFATWAPQMNVVMYVG 371
>gi|330803796|ref|XP_003289888.1| hypothetical protein DICPUDRAFT_154353 [Dictyostelium purpureum]
gi|325079999|gb|EGC33573.1| hypothetical protein DICPUDRAFT_154353 [Dictyostelium purpureum]
Length = 1851
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 136/213 (63%), Gaps = 10/213 (4%)
Query: 295 ASASRNMLQEYELFF--RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
+S SR +++ +E F RN K + FHVL+TT++ I+ D L W +
Sbjct: 801 SSTSREIIRMHEFFTINRNGKKKL-------NFHVLLTTYDFILKDKNILGSIKWEFLAV 853
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLKN L E L+L H +R+L++GTPLQN++ EL++LLNFL P +F++ + F
Sbjct: 854 DEAHRLKNSESVLHEVLKLYHTTNRLLVTGTPLQNSLKELWNLLNFLMPNKFTSLKDFQD 913
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
++ LK ++ +L +LKP +LRR+K+DVEKS+ PK E ++ V+L+ +QKKYY+ IL +
Sbjct: 914 QYSDLKENDQIAQLHSVLKPHLLRRIKKDVEKSLPPKTERILRVDLSAVQKKYYKWILTK 973
Query: 473 NFSFLSKGTTSANVPNLMNTMMELRKCCIHPYL 505
NF L+KG L+N M EL+K C HPYL
Sbjct: 974 NFQELNKGVKGEKT-TLLNIMTELKKTCNHPYL 1005
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 80/141 (56%), Gaps = 33/141 (23%)
Query: 16 WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
+ KL+K P + + TLR YQ+EGLNWL+ SW N N ILADEMGL
Sbjct: 703 FTKLDKQPSWISAGTLRDYQMEGLNWLVHSWMNNTNVILADEMGL--------------- 747
Query: 76 EMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTDL-NVIVYHATFV 133
GKTIQ+++F+ +F + I+GPFLV+ PLSTI NWQREF W L N+IVY
Sbjct: 748 ----GKTIQTISFLSYLFNEQSIKGPFLVVVPLSTIENWQREFAKWAPLMNLIVY----- 798
Query: 134 VLLQTGSKFFRICL---EFFV 151
TGS R + EFF
Sbjct: 799 ----TGSSTSREIIRMHEFFT 815
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWTDL-NVIVYHG 192
I+GPFLV+ PLSTI NWQREF W L N+IVY G
Sbjct: 765 SIKGPFLVVVPLSTIENWQREFAKWAPLMNLIVYTG 800
>gi|357132133|ref|XP_003567687.1| PREDICTED: probable chromatin-remodeling complex ATPase chain-like
[Brachypodium distachyon]
Length = 1099
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 135/198 (68%), Gaps = 10/198 (5%)
Query: 317 IKEKDLY--KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHL 374
I+EK L KF V +T+FE+ I + LK F+WR IIDEAHR+KN N L + +RL
Sbjct: 313 IREKLLQPGKFDVCVTSFEMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMRLFST 372
Query: 375 EHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLL 430
+R+L++GTPLQNN++EL+SLLNFL P+ FS+ E F E+ Q+ E++ V +L +L
Sbjct: 373 NYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVL 431
Query: 431 KPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLM 490
+P +LRRLK DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+
Sbjct: 432 RPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAG---GERKRLL 488
Query: 491 NTMMELRKCCIHPYLLNG 508
N M+LRKCC HPYL G
Sbjct: 489 NIAMQLRKCCNHPYLFQG 506
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q+++ L +
Sbjct: 223 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHE--------------- 267
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
FK GI GP +V+AP ST+ NW +E
Sbjct: 268 --FK-GITGPHMVVAPKSTLGNWMKEI 291
>gi|268557732|ref|XP_002636856.1| C. briggsae CBR-LET-418 protein [Caenorhabditis briggsae]
Length = 1849
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 131/215 (60%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRN------DKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +L+E+E F + K +K D KFHVL+T++E I D L W +
Sbjct: 685 SRVVLREHEFSFVDGAVRTGPKAGRMKTTDNLKFHVLLTSYETINMDKTILSSIEWGALV 744
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN + L + +RVLL+GTPLQNN+ ELF LLNFL ++F+ EAF
Sbjct: 745 VDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFT 804
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
+EF ++ E ++ KL LL P MLRRLK DV + K E +V VEL+ +QKK+Y+ IL
Sbjct: 805 AEFSEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSQMQKKWYKNILT 864
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ + +LMN +MEL+KCC HPYL
Sbjct: 865 RNFDALNVKNGGTQM-SLMNVLMELKKCCNHPYLF 898
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 83/164 (50%), Gaps = 34/164 (20%)
Query: 5 KKPKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++PKK+ K + P Y ++ L YQLEG+NWL W NG + ILADEMGLG
Sbjct: 571 RRPKKREKVDIRKKYDVQPDYVSETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLG- 629
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
KT+QSLTF+ + K G +GPFL+ APLSTI NW+RE E W
Sbjct: 630 ------------------KTVQSLTFLYTLMKEGHCKGPFLIAAPLSTIINWEREAEQWC 671
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTGIRG 161
F V+ G + R+ L EF FVD +TG +
Sbjct: 672 --------PDFYVVTYVGDRDSRVVLREHEFSFVDGAVRTGPKA 707
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
F+ + K G +GPFL+ APLSTI NW+RE E W D V+ Y G R
Sbjct: 637 FLYTLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGDR 683
>gi|357605668|gb|EHJ64730.1| putative Chromodomain helicase-DNA-binding protein Mi-2-like protein
[Danaus plexippus]
Length = 1963
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 136/212 (64%), Gaps = 4/212 (1%)
Query: 298 SRNMLQEYELFFRNDKNQF---IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
SR +++E EL F + N+ K K KF+VL+T++E+I D L +W + ++DE
Sbjct: 806 SRAVIRENELTFDDGANRGGRPSKIKSQVKFNVLLTSYELISIDSTCLGSIDWAVLVVDE 865
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLK+ K L H+ +++LL+GTPLQNN+ ELF LLNFL +F++ AF +EF
Sbjct: 866 AHRLKSNQSKFFRLLAGYHINYKLLLTGTPLQNNLEELFHLLNFLNKDKFNDLAAFQNEF 925
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
+ E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL RN+
Sbjct: 926 ADVSKEEQVKRLHEMLGPHMLRRLKADVLKNMPAKSEFIVRVELSPMQKKYYKYILTRNY 985
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
L+ + V +L+N MM+L+KCC HPYL
Sbjct: 986 EALNPKSGGQTV-SLLNVMMDLKKCCNHPYLF 1016
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 71/126 (56%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +P + K E P VY+ L YQL+GLNWL +SW G + ILADEMGL
Sbjct: 694 PPDRPTTNLNKKYEDQPPFVYETGMQLHTYQLDGLNWLRYSWGQGIDTILADEMGL---- 749
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ ++FK G +GPFLV PLSTI NW+REFE W D
Sbjct: 750 ---------------GKTIQTVTFLYSLFKEGHCKGPFLVSVPLSTIINWEREFELWAPD 794
Query: 123 LNVIVY 128
L I Y
Sbjct: 795 LYCITY 800
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ ++FK G +GPFLV PLSTI NW+REFE W DL I Y G +
Sbjct: 758 FLYSLFKEGHCKGPFLVSVPLSTIINWEREFELWAPDLYCITYVGDK 804
>gi|218188229|gb|EEC70656.1| hypothetical protein OsI_01941 [Oryza sativa Indica Group]
Length = 1259
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 131/189 (69%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + LK F+WR IIDEAHR+KN N L + +R+ + +R+L++GT
Sbjct: 330 KFDVCVTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGT 389
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL+SLLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 390 PLQNNLHELWSLLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 448
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKC
Sbjct: 449 SDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINAG---GERKRLLNIAMQLRKC 505
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 506 CNHPYLFQG 514
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 18/90 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 231 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 274
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAW 120
GI GP +V+AP ST+ NW +E + +
Sbjct: 275 EF--RGITGPHMVVAPKSTLGNWIKEIQRF 302
>gi|294925765|ref|XP_002778999.1| Chromodomain helicase-DNA-binding protein, putative [Perkinsus
marinus ATCC 50983]
gi|239887845|gb|EER10794.1| Chromodomain helicase-DNA-binding protein, putative [Perkinsus
marinus ATCC 50983]
Length = 1105
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 137/192 (71%), Gaps = 1/192 (0%)
Query: 317 IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEH 376
+++ +KF++L+T++E+I++D L W+ +IDEAHRL+NR K L+ + L +
Sbjct: 383 LRKSTYFKFNILLTSYELIMTDEEYLAPIPWQYVVIDEAHRLRNREAKTLQVMESLSCRY 442
Query: 377 RVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLR 436
+LLSGTPLQNN+ EL++LL+F+EP +F + EAF EFG+LKTE +V L LL+P +LR
Sbjct: 443 TMLLSGTPLQNNIGELWALLHFIEPVKFCSKEAFEQEFGELKTEKQVESLHRLLRPHLLR 502
Query: 437 RLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMEL 496
RLKE+V + EET+++VELT +QK YYR I ERN ++LS G + P+L+N ++L
Sbjct: 503 RLKEEVADELPDLEETIIDVELTKLQKAYYRAIFERNKTYLS-GAQKSGGPSLINLEVQL 561
Query: 497 RKCCIHPYLLNG 508
RKCC HP+ ++G
Sbjct: 562 RKCCNHPFTIDG 573
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 72/131 (54%), Gaps = 21/131 (16%)
Query: 2 SLIKKPKKKPPASDWVKLEK---SPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEM 58
S K P PA+D K P ++ L YQLEGLNWL+ W GRN ILADEM
Sbjct: 231 SDYKAPPPMDPAADGSSGRKYVAPPKFRGGQRLFPYQLEGLNWLIECWEQGRNPILADEM 290
Query: 59 GLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFE 118
GLGKTI TI L ++ V + ++GPFLV+APLST+ +W++ +
Sbjct: 291 GLGKTI----------------TTIAFLNYLFTVER--VKGPFLVVAPLSTLGHWKKVAD 332
Query: 119 AWTDLNVIVYH 129
WTD+N + YH
Sbjct: 333 QWTDMNCLYYH 343
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH---GRRKKLSRRDKE 203
++GPFLV+APLST+ +W++ + WTD+N + YH GR + RD E
Sbjct: 311 VKGPFLVVAPLSTLGHWKKVADQWTDMNCLYYHDEGGREGRSELRDSE 358
>gi|324499809|gb|ADY39928.1| Chromodomain-helicase-DNA-binding protein 3 [Ascaris suum]
Length = 1844
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 129/215 (60%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFF------RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E+E F K +K KFHVL+T++E+I D L W +
Sbjct: 708 SRTVIREHEFSFIEGAVRGGPKVTRMKTDQGIKFHVLLTSYELINIDKTILSSIEWAGLV 767
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN LR + +R+LL+GTPLQNN+ ELF LLNFL P +F + E+F
Sbjct: 768 VDEAHRLKNNQSLFFRTLRDFKIGYRLLLTGTPLQNNLEELFHLLNFLSPDRFYDLESFT 827
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF ++ E ++ KL LL P MLRRLK DV + K E +V VEL+ +QKKYY+ IL
Sbjct: 828 HEFAEISKEDQIQKLHSLLGPHMLRRLKADVLSGMPSKSELIVRVELSPMQKKYYKNILT 887
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ V +L+N +M+L+KCC HPYL
Sbjct: 888 RNFEALNPKGGGTQV-SLLNIIMDLKKCCNHPYLF 921
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 62/115 (53%), Gaps = 23/115 (20%)
Query: 18 KLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
K E P + + L YQLEG+NWL W G + ILADEMGL
Sbjct: 607 KYETQPDFITETGGKLHDYQLEGVNWLRHCWSQGTDAILADEMGL--------------- 651
Query: 76 EMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVY 128
GKTIQS+ F+ ++ K G RGPFLV APLST+ NW+RE E W D V+ Y
Sbjct: 652 ----GKTIQSMAFLYSLVKEGHTRGPFLVAAPLSTLINWEREAEFWCPDFYVVTY 702
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 147 LEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
+ F V + RGPFLV APLST+ NW+RE E W D V+ Y G +
Sbjct: 658 MAFLYSLVKEGHTRGPFLVAAPLSTLINWEREAEFWCPDFYVVTYVGDK 706
>gi|294925769|ref|XP_002779000.1| Chromodomain helicase-DNA-binding protein, putative [Perkinsus
marinus ATCC 50983]
gi|239887846|gb|EER10795.1| Chromodomain helicase-DNA-binding protein, putative [Perkinsus
marinus ATCC 50983]
Length = 1042
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 137/192 (71%), Gaps = 1/192 (0%)
Query: 317 IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEH 376
+++ +KF++L+T++E+I++D L W+ +IDEAHRL+NR K L+ + L +
Sbjct: 383 LRKSTYFKFNILLTSYELIMTDEEYLAPIPWQYVVIDEAHRLRNREAKTLQVMESLSCRY 442
Query: 377 RVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLR 436
+LLSGTPLQNN+ EL++LL+F+EP +F + EAF EFG+LKTE +V L LL+P +LR
Sbjct: 443 TMLLSGTPLQNNIGELWALLHFIEPVKFCSKEAFEQEFGELKTEKQVESLHRLLRPHLLR 502
Query: 437 RLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMEL 496
RLKE+V + EET+++VELT +QK YYR I ERN ++LS G + P+L+N ++L
Sbjct: 503 RLKEEVADELPDLEETIIDVELTKLQKAYYRAIFERNKTYLS-GAQKSGGPSLINLEVQL 561
Query: 497 RKCCIHPYLLNG 508
RKCC HP+ ++G
Sbjct: 562 RKCCNHPFTIDG 573
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 72/131 (54%), Gaps = 21/131 (16%)
Query: 2 SLIKKPKKKPPASDWVKLEK---SPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEM 58
S K P PA+D K P ++ L YQLEGLNWL+ W GRN ILADEM
Sbjct: 231 SDYKAPPPMDPAADGSSGRKYVAPPKFRGGQRLFPYQLEGLNWLIECWEQGRNPILADEM 290
Query: 59 GLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFE 118
GLGKTI TI L ++ V + ++GPFLV+APLST+ +W++ +
Sbjct: 291 GLGKTI----------------TTIAFLNYLFTVER--VKGPFLVVAPLSTLGHWKKVAD 332
Query: 119 AWTDLNVIVYH 129
WTD+N + YH
Sbjct: 333 QWTDMNCLYYH 343
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH---GRRKKLSRRDKERLRLKYVAADY 214
++GPFLV+APLST+ +W++ + WTD+N + YH GR + RD E + A DY
Sbjct: 311 VKGPFLVVAPLSTLGHWKKVADQWTDMNCLYYHDEGGREGRSELRDSE---FYHFALDY 366
>gi|307109767|gb|EFN58004.1| hypothetical protein CHLNCDRAFT_34395 [Chlorella variabilis]
Length = 1019
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 134/190 (70%), Gaps = 9/190 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V++T++E++I + + F+WR IIDEAHR+KN N +L + +RLL +R+L++GT
Sbjct: 216 KFDVVVTSYEMVIKEKNHWRKFHWRYIIIDEAHRIKNENSRLSQVVRLLKTNYRMLITGT 275
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE-----VNKLQLLLKPMMLRRL 438
PLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E V +L +L+P +LRRL
Sbjct: 276 PLQNNLHELWALLNFLLPEVFSSAEKF-DEWFQMGDSKEGEAEVVQQLHKVLRPFLLRRL 334
Query: 439 KEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRK 498
K DVEKS+ PK+ET++++ ++ +Q+KYY +L+++ ++ G A+ L+N +M+LRK
Sbjct: 335 KSDVEKSLPPKKETILKIGMSEMQRKYYAALLQKDMDAVTGG---ADRSRLLNIVMQLRK 391
Query: 499 CCIHPYLLNG 508
CC HPYL G
Sbjct: 392 CCNHPYLFQG 401
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 60/114 (52%), Gaps = 19/114 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+L+ P + +R YQL+GLNWL+ + NG N ILADEMGLGKT+Q
Sbjct: 104 RLQVQPSVISGGKMREYQLQGLNWLIHLYDNGINGILADEMGLGKTLQ------------ 151
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHA 130
TI L ++ GI GP +VI P ST+ NW EF+ W + + +H
Sbjct: 152 ----TISLLGYLREF--RGITGPHMVIVPKSTLHNWLNEFKRWCPVIKAVKFHG 199
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHGRRKK 196
GI GP +VI P ST+ NW EF+ W + + +HG R++
Sbjct: 164 GITGPHMVIVPKSTLHNWLNEFKRWCPVIKAVKFHGNREE 203
>gi|294891224|ref|XP_002773482.1| chromodomain helicase dna binding protein, putative [Perkinsus
marinus ATCC 50983]
gi|239878635|gb|EER05298.1| chromodomain helicase dna binding protein, putative [Perkinsus
marinus ATCC 50983]
Length = 994
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 137/192 (71%), Gaps = 1/192 (0%)
Query: 317 IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEH 376
+++ +KF++L+T++E+I++D L W+ +IDEAHRL+NR K L+ + L +
Sbjct: 384 LRKSTYFKFNILLTSYELIMTDEEYLAPIPWQYVVIDEAHRLRNREAKTLQVMESLSCRY 443
Query: 377 RVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLR 436
+LLSGTPLQNN+ EL++LL+F+EP +F + EAF EFG+LKTE +V L LL+P +LR
Sbjct: 444 TMLLSGTPLQNNIGELWALLHFIEPVKFCSKEAFEQEFGELKTEKQVESLHRLLRPHLLR 503
Query: 437 RLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMEL 496
RLKE+V + EET+++VELT +QK YYR I ERN ++LS G + P+L+N ++L
Sbjct: 504 RLKEEVADELPDLEETIIDVELTKLQKAYYRAIFERNKTYLS-GAQKSGGPSLINLEVQL 562
Query: 497 RKCCIHPYLLNG 508
RKCC HP+ ++G
Sbjct: 563 RKCCNHPFTIDG 574
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 72/131 (54%), Gaps = 21/131 (16%)
Query: 2 SLIKKPKKKPPASDWVKLEK---SPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEM 58
S K P PA+D K P ++ L YQLEGLNWL+ W GRN ILADEM
Sbjct: 232 SDYKAPPPMDPAADGSSGRKYVAPPKFRGGQRLFPYQLEGLNWLIECWEQGRNPILADEM 291
Query: 59 GLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFE 118
GLGKTI TI L ++ V + ++GPFLV+APLST+ +W++ +
Sbjct: 292 GLGKTI----------------TTIAFLNYLFTVER--VKGPFLVVAPLSTLGHWKKVAD 333
Query: 119 AWTDLNVIVYH 129
WTD+N + YH
Sbjct: 334 QWTDMNCLYYH 344
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH---GRRKKLSRRDKERLRLKYVAADY 214
++GPFLV+APLST+ +W++ + WTD+N + YH GR + RD E + A DY
Sbjct: 312 VKGPFLVVAPLSTLGHWKKVADQWTDMNCLYYHDEGGREGRSELRDSE---FYHFALDY 367
>gi|195591505|ref|XP_002085481.1| GD14801 [Drosophila simulans]
gi|194197490|gb|EDX11066.1| GD14801 [Drosophila simulans]
Length = 893
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 138/213 (64%), Gaps = 2/213 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKE-KDLYKFHVLITTFEIIISDCLELKDFNWRLCIID 353
+R +++++EL F + ++E + YKF+V++T++E I D L +W ++D
Sbjct: 351 GKTARAVIRKHELSFEEVTTKTMRENQTQYKFNVMLTSYEFISLDAAFLGSIDWAALVVD 410
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRL++ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ + F +E
Sbjct: 411 EAHRLRSNQSKFFRILSRYRIAYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAE 470
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L+P MLRRLK DV KS+ PK E +V VEL+++QKK+Y+ IL +N
Sbjct: 471 FTDVSKEEQVKRLHEILEPHMLRRLKVDVLKSMPPKSEFIVRVELSSMQKKFYKHILTKN 530
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
F L++ V +L+N MM+LRKCC HPYL
Sbjct: 531 FKALNQ-KGGGRVCSLLNIMMDLRKCCNHPYLF 562
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 25/129 (19%)
Query: 6 KPKKKP-PASDW-VKLEKSPVYKNDNTLR--AYQLEGLNWLMFSWFNGRNCILADEMGLG 61
+PK +P P D K E PV+ + L+ +Q+EG++WL +SW G ILADEMGL
Sbjct: 239 RPKHRPAPTIDLNKKYEDQPVFLKEGGLKLHPFQMEGVSWLRYSWGQGIPTILADEMGL- 297
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW 120
GKTIQ++ F+ ++FK G RGPFL+ PLST+PNW+RE E W
Sbjct: 298 ------------------GKTIQTVVFLYSLFKEGHCRGPFLITVPLSTLPNWERELELW 339
Query: 121 T-DLNVIVY 128
+L + Y
Sbjct: 340 APELYCVTY 348
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++FK G RGPFL+ PLST+PNW+RE E W +L + Y G
Sbjct: 306 FLYSLFKEGHCRGPFLITVPLSTLPNWERELELWAPELYCVTYVG 350
>gi|115436572|ref|NP_001043044.1| Os01g0367900 [Oryza sativa Japonica Group]
gi|57012942|sp|Q7G8Y3.2|ISW2_ORYSJ RecName: Full=Probable chromatin-remodeling complex ATPase chain;
AltName: Full=ISW2-like; AltName: Full=Sucrose
nonfermenting protein 2 homolog
gi|54290802|dbj|BAD61441.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group]
gi|57900237|dbj|BAD88342.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group]
gi|58737200|dbj|BAD89475.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group]
gi|113532575|dbj|BAF04958.1| Os01g0367900 [Oryza sativa Japonica Group]
gi|215740512|dbj|BAG97168.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618445|gb|EEE54577.1| hypothetical protein OsJ_01780 [Oryza sativa Japonica Group]
Length = 1107
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 131/189 (69%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + LK F+WR IIDEAHR+KN N L + +R+ + +R+L++GT
Sbjct: 330 KFDVCVTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGT 389
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL+SLLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 390 PLQNNLHELWSLLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 448
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKC
Sbjct: 449 SDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINAG---GERKRLLNIAMQLRKC 505
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 506 CNHPYLFQG 514
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 18/88 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 231 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 274
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFE 118
GI GP +V+AP ST+ NW +E +
Sbjct: 275 EF--RGITGPHMVVAPKSTLGNWIKEIQ 300
>gi|14091823|gb|AAK53826.1|AC011806_3 Putative SWI/SNF related, matrix associated, actin dependent
regulator of chromatin [Oryza sativa]
gi|15528681|dbj|BAB64747.1| putative DNA-dependent ATPase [Oryza sativa Japonica Group]
Length = 1122
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 131/189 (69%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + LK F+WR IIDEAHR+KN N L + +R+ + +R+L++GT
Sbjct: 330 KFDVCVTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGT 389
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL+SLLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 390 PLQNNLHELWSLLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 448
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKC
Sbjct: 449 SDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINAG---GERKRLLNIAMQLRKC 505
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 506 CNHPYLFQG 514
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 18/88 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 231 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 274
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFE 118
GI GP +V+AP ST+ NW +E +
Sbjct: 275 EF--RGITGPHMVVAPKSTLGNWIKEIQ 300
>gi|384250118|gb|EIE23598.1| hypothetical protein COCSUDRAFT_47361 [Coccomyxa subellipsoidea
C-169]
Length = 1246
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 133/211 (63%), Gaps = 7/211 (3%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
S SR +++ +E + + +YKF VLITTFE+++ D L + W ++DEA
Sbjct: 210 SKSREVIRAFEFYTGKRSGR------MYKFDVLITTFELVLKDAAVLSEIKWSYLVVDEA 263
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN L L ++++L++GTPLQN++ EL++LL+FLEP +F N E F +
Sbjct: 264 HRLKNNESALYRELATWQFKNKLLVTGTPLQNSMKELWALLHFLEPSKFPNAEDFDARHS 323
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
LK E+ +L L+P +LRR+ +DVEKS+ PK E ++ V ++ +QK+YY+ IL RNF
Sbjct: 324 -LKKAEELTQLHTELRPHLLRRVIKDVEKSLPPKNERILRVAMSPLQKQYYKWILTRNFK 382
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
L+KGT +L+N + EL+KCC HP+L
Sbjct: 383 ELNKGTKGGGQISLLNIITELKKCCNHPFLF 413
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 61/108 (56%), Gaps = 21/108 (19%)
Query: 23 PVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKT 82
P + LR YQLEGLNWL++SW NCILADEMGLGKTIQ C+
Sbjct: 118 PDFLRAGQLRDYQLEGLNWLIYSWMQNNNCILADEMGLGKTIQ-----CV---------- 162
Query: 83 IQSLTFVDAV-FKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVY 128
+F+ + I GP+LV+ PLST+PNW REF W N +VY
Sbjct: 163 ----SFIGYLSLWQQIAGPYLVVVPLSTVPNWIREFRKWLPQCNALVY 206
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 146 CLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRK 195
C+ F I GP+LV+ PLST+PNW REF W N +VY G K
Sbjct: 161 CVSFIGYLSLWQQIAGPYLVVVPLSTVPNWIREFRKWLPQCNALVYVGDSK 211
>gi|123495365|ref|XP_001326721.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
gi|121909640|gb|EAY14498.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
Length = 1587
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 130/211 (61%), Gaps = 21/211 (9%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+RN ++E+E + + KF VLIT +E+II+D FNW I+DEA R
Sbjct: 314 ARNTIREHEFNYEDGTGP--------KFDVLITNYELIINDTEVFSQFNWSFLIVDEAQR 365
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+N KL L +H +HR+LL+GTP+QN + EL SLL FL P +F + A
Sbjct: 366 LKNQNSKLFSALANVHSDHRILLTGTPIQNTLEELVSLLEFLHPGEFQDLTA-------A 418
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+T +V +L+ L+P +LRRLK DV+K+IA K+ET++E +T QK+ Y+ ILE N FL
Sbjct: 419 ETAEDVFELRKKLEPHLLRRLKSDVDKTIAAKKETIIECGMTKFQKQIYKDILESNARFL 478
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG +N+ MELRK CIHPYL+ G
Sbjct: 479 TKGAHCSNI------AMELRKVCIHPYLVKG 503
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 72/119 (60%), Gaps = 20/119 (16%)
Query: 11 PPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
P + + +L++SP ++ L +YQL G+NWL W+N NCILADEMG
Sbjct: 209 PDPAKFEQLKESPKTESGLELFSYQLAGMNWLRHRWYNNTNCILADEMG----------- 257
Query: 71 CILADEMGLGKTIQSLTFVD-AVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
LGKT+Q+++F++ A G++ PFL+IAPL T+ NW REF WT LNV++Y
Sbjct: 258 --------LGKTVQAISFLNYAHTHEGLQTPFLIIAPLVTLYNWLREFNTWTKLNVVIY 308
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 146 CLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRK 195
+ F A G++ PFL+IAPL T+ NW REF WT LNV++Y G ++
Sbjct: 264 AISFLNYAHTHEGLQTPFLIIAPLVTLYNWLREFNTWTKLNVVIYTGPKE 313
>gi|154420998|ref|XP_001583513.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
gi|121917755|gb|EAY22527.1| Type III restriction enzyme, res subunit family protein
[Trichomonas vaginalis G3]
Length = 1468
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 135/212 (63%), Gaps = 6/212 (2%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ R+++ EYELF++ + +++ KF VL+T E ++ ++ W L IIDE
Sbjct: 395 SQQDRDLIAEYELFYKPPR------QNIPKFQVLLTNIETVLKSQEVIQKIQWNLVIIDE 448
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN N K+ + L ++H +L++GTP+QNN++E+F+L++F+ P +F + E F E
Sbjct: 449 AHRLKNLNSKIYSVMFSLQMDHVLLMTGTPIQNNIDEIFALMHFIAPLKFPSLEEFKKEH 508
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G ++T +V ++Q +KP MLRR K DVE +I KEET+VEVELT QK YYR +++R
Sbjct: 509 GSIETAEDVERIQNAIKPYMLRRKKCDVESTIGLKEETIVEVELTRSQKFYYRLLIDRKT 568
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
L+ + A +L N M+LRK C HPYL
Sbjct: 569 KDLTTHKSHALSQDLNNLAMQLRKVCNHPYLF 600
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 18/109 (16%)
Query: 23 PVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKT 82
P YKN N LR YQ++ LNWL S+ G+N ILADEMGLGKT+ CI
Sbjct: 305 PKYKNGNQLRDYQIDALNWLRASYQTGQNAILADEMGLGKTVM-----CI---------- 349
Query: 83 IQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHAT 131
SL +D G+ GPFL++APL T+PNW REFE+W++++ I++H +
Sbjct: 350 --SL-LLDICQNCGVDGPFLIVAPLGTLPNWIREFESWSNIDTILFHGS 395
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 38/51 (74%)
Query: 145 ICLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRK 195
+C+ +D G+ GPFL++APL T+PNW REFE+W++++ I++HG ++
Sbjct: 347 MCISLLLDICQNCGVDGPFLIVAPLGTLPNWIREFESWSNIDTILFHGSQQ 397
>gi|357134639|ref|XP_003568924.1| PREDICTED: probable chromatin-remodeling complex ATPase chain-like
[Brachypodium distachyon]
Length = 1101
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 130/189 (68%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 328 KFDVCVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGT 387
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL+SLLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 388 PLQNNLHELWSLLNFLLPEIFSSAETF-DEWFQISGENDQHEVVQQLHKVLRPFLLRRLK 446
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKC
Sbjct: 447 SDVEKGLPPKKETILKVGMSEMQKQYYRALLQKDLEVINAG---GERKRLLNIAMQLRKC 503
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 504 CNHPYLFQG 512
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 229 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 272
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW +E
Sbjct: 273 EF--RGITGPHMVVAPKSTLGNWMKEI 297
>gi|255551667|ref|XP_002516879.1| helicase, putative [Ricinus communis]
gi|223543967|gb|EEF45493.1| helicase, putative [Ricinus communis]
Length = 1064
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 139/203 (68%), Gaps = 10/203 (4%)
Query: 312 DKNQFIKEKDLY--KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGL 369
D+ + I+E+ L KF V +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +
Sbjct: 274 DERRHIREELLVAGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTM 333
Query: 370 RLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNK 425
RL + +R+L++GTPLQNN++EL+SLLNFL P+ FS+ E F E+ Q+ E++ V +
Sbjct: 334 RLYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQ 392
Query: 426 LQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSAN 485
L +L+P +LRRLK DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G
Sbjct: 393 LHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAG---GE 449
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N M+LRKCC HPYL G
Sbjct: 450 RKRLLNIAMQLRKCCNHPYLFQG 472
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q+++ L +
Sbjct: 189 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHE--------------- 233
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
F+ GI GP +V+AP ST+ NW E
Sbjct: 234 --FR-GITGPHMVVAPKSTLGNWMNEI 257
>gi|302796603|ref|XP_002980063.1| hypothetical protein SELMODRAFT_177985 [Selaginella moellendorffii]
gi|300152290|gb|EFJ18933.1| hypothetical protein SELMODRAFT_177985 [Selaginella moellendorffii]
Length = 1274
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 146/233 (62%), Gaps = 9/233 (3%)
Query: 281 FSPTMSSGTDGLKSASASRNMLQEYELFFRNDKNQFIKEKDL-----YKFHVLITTFEII 335
++P MS T + SA A R ++++ E F ++ +K+ KF+VL+T++E++
Sbjct: 339 WAPQMSIVT-YIGSAQA-REIIRQKEFFLPKERKPEKGKKNASRQRRVKFNVLLTSYEMV 396
Query: 336 ISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSL 395
+D LK W I+DE HRLKN++ KL + L RVLL+GTPLQNN++ELF+L
Sbjct: 397 NTDSAVLKPIKWECLIVDEGHRLKNKDSKLFQTLHNYSTYSRVLLTGTPLQNNLDELFTL 456
Query: 396 LNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVE 455
+ FL+ +FS+ E F EF + E +V +L +L +LRR+K+DV K + PK+E +V
Sbjct: 457 MYFLDSSKFSSLEEFQLEFKDINHEEQVQRLHTMLSSHLLRRVKKDVLKELPPKKELIVR 516
Query: 456 VELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
VEL+ IQK YYR +L RN+ LS+ S +L N +MELRK C HP+LL+G
Sbjct: 517 VELSAIQKDYYRAVLTRNYEVLSRH--SGVQVSLNNLVMELRKICAHPFLLDG 567
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 20/110 (18%)
Query: 20 EKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGL 79
+K+P + L YQLEGLN+L ++W G+ ILADEM GL
Sbjct: 258 DKTPEFVVGGVLHPYQLEGLNFLRYAWQQGKPVILADEM-------------------GL 298
Query: 80 GKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GKTIQ+++F+ ++ G+ P L++APLST+ NW+REF W ++++ Y
Sbjct: 299 GKTIQTISFLTSLLHEGVSLPHLIVAPLSTLRNWEREFSIWAPQMSIVTY 348
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++ G+ P L++APLST+ NW+REF W ++++ Y G
Sbjct: 307 FLTSLLHEGVSLPHLIVAPLSTLRNWEREFSIWAPQMSIVTYIG 350
>gi|328716042|ref|XP_003245819.1| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Acyrthosiphon pisum]
Length = 2002
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 135/211 (63%), Gaps = 3/211 (1%)
Query: 298 SRNMLQEYELFFRNDKN--QFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
SR ++E E F + ++ + K K + KFHVL+T++E+I D L W + ++DEA
Sbjct: 814 SRVTIRENEFSFDDTRSGVRCNKIKGIVKFHVLLTSYELISIDAPLLGSIEWAVLVVDEA 873
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLK+ K L ++ +++LL+GTPLQNN+ ELF LLNFL P++F++ F +EF
Sbjct: 874 HRLKSNQSKFFRLLAGYNIRNKLLLTGTPLQNNLEELFHLLNFLTPEKFNDLTVFQNEFA 933
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
+ E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL RNF
Sbjct: 934 DISKEEQVKRLHEMLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTRNFE 993
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
L+ V +L+N MM+L+KCC HPYL
Sbjct: 994 ALNPRGGGQQV-SLLNIMMDLKKCCNHPYLF 1023
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 82/156 (52%), Gaps = 35/156 (22%)
Query: 12 PASDWVK-LEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
P SD K EK P Y D L YQLEGLNWL +SW G + ILADEMGL
Sbjct: 706 PVSDLKKKYEKQPDYVTDTGMELHPYQLEGLNWLRYSWGQGIDTILADEMGL-------- 757
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIV 127
GKTIQ++TF+ +++K G +GPFLV PLST+ NW+REFE W
Sbjct: 758 -----------GKTIQTITFLYSLYKEGHCKGPFLVSVPLSTLINWEREFETWA------ 800
Query: 128 YHATFVVLLQTGSKFFRICL---EFFVDAVFKTGIR 160
F V+ G K R+ + EF D ++G+R
Sbjct: 801 --PDFYVVSYVGDKDSRVTIRENEFSFDDT-RSGVR 833
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV PLST+ NW+REFE W D V+ Y G +
Sbjct: 766 FLYSLYKEGHCKGPFLVSVPLSTLINWEREFETWAPDFYVVSYVGDK 812
>gi|2645435|gb|AAB87384.1| CHD3 [Drosophila melanogaster]
Length = 1518
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 138/210 (65%), Gaps = 2/210 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKE-KDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
+R +++++E+ F + ++E + YKF+V++T++E I D L +W ++DEAH
Sbjct: 356 ARAVIRKHEISFEEVTTKTMRENQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVDEAH 415
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RL++ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ + F +EF
Sbjct: 416 RLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEFTD 475
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
+ E +V +L +L+P MLRRLK DV KS+ PK E +V VEL+++QKK+Y+ IL +NF
Sbjct: 476 VSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKA 535
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
L++ V +L+N MM+LRKCC HPYL
Sbjct: 536 LNQ-KGGGRVCSLLNIMMDLRKCCNHPYLF 564
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 23/115 (20%)
Query: 18 KLEKSPVYKNDNTLR--AYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
K E PV+ + L+ +Q+EG++WL +SW G ILADEMGL
Sbjct: 255 KYEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGL--------------- 299
Query: 76 EMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GKTIQ++ F+ ++FK G RGPFL+ PLST+ NW+RE E W +L + Y
Sbjct: 300 ----GKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTY 350
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++FK G RGPFL+ PLST+ NW+RE E W +L + Y G
Sbjct: 308 FLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVG 352
>gi|302811536|ref|XP_002987457.1| hypothetical protein SELMODRAFT_158748 [Selaginella moellendorffii]
gi|300144863|gb|EFJ11544.1| hypothetical protein SELMODRAFT_158748 [Selaginella moellendorffii]
Length = 1292
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 146/233 (62%), Gaps = 9/233 (3%)
Query: 281 FSPTMSSGTDGLKSASASRNMLQEYELFFRNDKNQFIKEKDL-----YKFHVLITTFEII 335
++P MS T + SA A R ++++ E F ++ +K+ KF+VL+T++E++
Sbjct: 339 WAPQMSIVT-YIGSAQA-REIIRQKEFFLPKERKPEKGKKNASRQRRVKFNVLLTSYEMV 396
Query: 336 ISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSL 395
+D LK W I+DE HRLKN++ KL + L RVLL+GTPLQNN++ELF+L
Sbjct: 397 NTDSAVLKPIKWECLIVDEGHRLKNKDSKLFQTLHNYSTYSRVLLTGTPLQNNLDELFTL 456
Query: 396 LNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVE 455
+ FL+ +FS+ E F EF + E +V +L +L +LRR+K+DV K + PK+E +V
Sbjct: 457 MYFLDSSKFSSLEEFQLEFKDINHEEQVQRLHTMLSSHLLRRVKKDVLKELPPKKELIVR 516
Query: 456 VELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
VEL+ IQK YYR +L RN+ LS+ S +L N +MELRK C HP+LL+G
Sbjct: 517 VELSAIQKDYYRAVLTRNYEVLSR--HSGVQVSLNNLVMELRKICAHPFLLDG 567
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 20/110 (18%)
Query: 20 EKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGL 79
+K+P + L YQLEGLN+L ++W G+ ILADEM GL
Sbjct: 258 DKTPEFVVGGVLHPYQLEGLNFLRYAWQQGKPVILADEM-------------------GL 298
Query: 80 GKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GKTIQ+++F+ ++ G+ P L++APLST+ NW+REF W ++++ Y
Sbjct: 299 GKTIQTISFLTSLLHEGVSLPHLIVAPLSTLRNWEREFSIWAPQMSIVTY 348
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++ G+ P L++APLST+ NW+REF W ++++ Y G
Sbjct: 307 FLTSLLHEGVSLPHLIVAPLSTLRNWEREFSIWAPQMSIVTYIG 350
>gi|115462129|ref|NP_001054664.1| Os05g0150300 [Oryza sativa Japonica Group]
gi|54291826|gb|AAV32194.1| putative ATPase [Oryza sativa Japonica Group]
gi|113578215|dbj|BAF16578.1| Os05g0150300 [Oryza sativa Japonica Group]
gi|222630218|gb|EEE62350.1| hypothetical protein OsJ_17139 [Oryza sativa Japonica Group]
Length = 1158
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 127/188 (67%), Gaps = 6/188 (3%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + LK F+WR IIDEAHR+KN N L + +R+ + +R+L++GT
Sbjct: 384 KFDVCVTSFEMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGT 443
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF---GQLKTESEVNKLQLLLKPMMLRRLKE 440
PLQNN++EL+SLLNFL P+ FS+ E F F G+ V +L +L+P +LRRLK
Sbjct: 444 PLQNNLHELWSLLNFLLPEIFSSAETFDDWFQISGENDQHEVVQQLHKVLRPFLLRRLKS 503
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKCC
Sbjct: 504 DVEKGLPPKKETILKVGMSEMQKQYYRALLQKDLEVVNAG---GERKRLLNIAMQLRKCC 560
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 561 NHPYLFQG 568
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 18/88 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 285 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 328
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFE 118
GI GP +V+AP ST+ NW +E +
Sbjct: 329 EF--RGITGPHMVVAPKSTLGNWMKEIQ 354
>gi|326500828|dbj|BAJ95080.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1731
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 139/217 (64%), Gaps = 9/217 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M Q++E F + +K FH LITT+E+I+ D L W ++DEAH
Sbjct: 683 ASREMCQQHEFFTNKKGGRHVK------FHTLITTYEVILKDKAVLSKIKWSYLMVDEAH 736
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN L L ++++L++GTPLQN+V EL++LL+FL+P +F++ + F+ +
Sbjct: 737 RLKNSEASLYIALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPVKFNSKDTFVERYKN 796
Query: 417 LKT--ESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + E+E+ L + L+P +LRR+ +DVEKS+ PK E ++ +E++ +QK+YY+ ILERNF
Sbjct: 797 LSSFNETELANLHMELRPHILRRVIKDVEKSLPPKIERILRIEMSPLQKQYYKWILERNF 856
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 857 QNLNKGVRGNQV-SLLNVVVELKKCCNHPFLFESADH 892
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 69/122 (56%), Gaps = 20/122 (16%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
+KK AS +L+ P + LR YQLEGLN+L+ W N N ILADEMGLGKTIQS+
Sbjct: 576 RKKSKAS-LRRLDDQPEWLKGGKLRDYQLEGLNFLVNGWRNDTNVILADEMGLGKTIQSV 634
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVI 126
+ +G Q I GPFLV+ PLST+ NW +EF W D+NV+
Sbjct: 635 SM-------LGFLHNAQE-----------INGPFLVVVPLSTLSNWAKEFRKWLPDMNVV 676
Query: 127 VY 128
+Y
Sbjct: 677 IY 678
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
I GPFLV+ PLST+ NW +EF W D+NV++Y G R
Sbjct: 646 INGPFLVVVPLSTLSNWAKEFRKWLPDMNVVIYVGNR 682
>gi|303283790|ref|XP_003061186.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226457537|gb|EEH54836.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 962
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 138/208 (66%), Gaps = 11/208 (5%)
Query: 309 FRNDKNQFIKEKDLY----KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCK 364
F + Q +KD Y F VL+T++E+II + LK F+WR CIIDEAHR+KN N +
Sbjct: 181 FHGNAEQRQAQKDEYMHAGGFDVLVTSYEMIIKEKNALKKFHWRYCIIDEAHRIKNENSR 240
Query: 365 LLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE-- 422
L + +R+ +R+L++GTPLQNN++EL++LLNFL P+ F + F FG + +E
Sbjct: 241 LSKTMRMFSCNNRLLITGTPLQNNLHELWALLNFLLPEVFGSAGQFEEWFGTGEEGAENV 300
Query: 423 --VNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKG 480
V +L +L+P +LRRLK +VEK++ PK+E +++V ++++QK YY+ L+++ +++G
Sbjct: 301 EVVQQLHKVLRPFLLRRLKAEVEKNLPPKKEMILKVAMSDMQKDYYKKALQKDIEVVNRG 360
Query: 481 TTSANVPNLMNTMMELRKCCIHPYLLNG 508
+ L+N +M+LRKCC HPYL G
Sbjct: 361 ---GDRSRLLNMVMQLRKCCNHPYLFQG 385
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 54/104 (51%), Gaps = 18/104 (17%)
Query: 17 VKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADE 76
V+L P +R YQL GLNW++ + +G N ILADEMGLGKT+Q
Sbjct: 87 VRLTVQPECIKFGKMREYQLAGLNWMIRLFDHGINGILADEMGLGKTLQ----------- 135
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW 120
TI L ++ GI GP +V+ P ST+ NW EF+ W
Sbjct: 136 -----TISLLGYLSEY--RGITGPHMVVVPKSTLGNWMNEFKRW 172
>gi|24666729|ref|NP_649111.1| Chd3 [Drosophila melanogaster]
gi|25089877|sp|O16102.3|CHD3_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein 3; AltName:
Full=ATP-dependent helicase Chd3
gi|23093148|gb|AAF49162.2| Chd3 [Drosophila melanogaster]
Length = 892
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
+R +++++E+ F + ++E YKF+V++T++E I D L +W ++D
Sbjct: 350 GKTARAVIRKHEISFEEVTTKTMRENQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVD 409
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRL++ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ + F +E
Sbjct: 410 EAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAE 469
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L+P MLRRLK DV KS+ PK E +V VEL+++QKK+Y+ IL +N
Sbjct: 470 FTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKN 529
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
F L++ V +L+N MM+LRKCC HPYL
Sbjct: 530 FKALNQ-KGGGRVCSLLNIMMDLRKCCNHPYLF 561
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 23/115 (20%)
Query: 18 KLEKSPVYKNDNTLR--AYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
K E PV+ + L+ +Q+EG++WL +SW G ILADEMGL
Sbjct: 252 KYEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGL--------------- 296
Query: 76 EMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GKTIQ++ F+ ++FK G RGPFL+ PLST+ NW+RE E W +L + Y
Sbjct: 297 ----GKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTY 347
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++FK G RGPFL+ PLST+ NW+RE E W +L + Y G
Sbjct: 305 FLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVG 349
>gi|125550862|gb|EAY96571.1| hypothetical protein OsI_18476 [Oryza sativa Indica Group]
Length = 1157
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 127/188 (67%), Gaps = 6/188 (3%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + LK F+WR IIDEAHR+KN N L + +R+ + +R+L++GT
Sbjct: 383 KFDVCVTSFEMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGT 442
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF---GQLKTESEVNKLQLLLKPMMLRRLKE 440
PLQNN++EL+SLLNFL P+ FS+ E F F G+ V +L +L+P +LRRLK
Sbjct: 443 PLQNNLHELWSLLNFLLPEIFSSAETFDDWFQISGENDQHEVVQQLHKVLRPFLLRRLKS 502
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKCC
Sbjct: 503 DVEKGLPPKKETILKVGMSEMQKQYYRALLQKDLEVVNAG---GERKRLLNIAMQLRKCC 559
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 560 NHPYLFQG 567
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 18/88 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 284 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 327
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFE 118
GI GP +V+AP ST+ NW +E +
Sbjct: 328 EF--RGITGPHMVVAPKSTLGNWMKEIQ 353
>gi|341900249|gb|EGT56184.1| hypothetical protein CAEBREN_32223 [Caenorhabditis brenneri]
Length = 1816
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 130/215 (60%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFF------RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +L+E+E F K +K + KFHVL+T++E I D L W +
Sbjct: 705 SRVVLREHEFSFVEGAVRSGPKAGKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALV 764
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN + L + +RVLL+GTPLQNN+ ELF LLNFL ++F+ EAF
Sbjct: 765 VDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPLQNNLEELFHLLNFLSAERFNQLEAFT 824
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
+EF ++ E ++ KL LL P MLRRLK DV + K E +V VEL+ +QKK+Y+ IL
Sbjct: 825 AEFSEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSPMQKKWYKNILT 884
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ + +LMN +MEL+KCC HPYL
Sbjct: 885 RNFDALNVKNGGTQM-SLMNVLMELKKCCNHPYLF 918
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 84/164 (51%), Gaps = 34/164 (20%)
Query: 5 KKPKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++PKK+ K E P Y ++ TL YQLEG+NWL W NG + ILADEMGLG
Sbjct: 591 RRPKKREKVDIRKKYEVQPDYVSETGGTLHPYQLEGINWLRHCWSNGTDAILADEMGLG- 649
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
KT+QSLTF+ + K G +GPFL+ APLSTI NW+RE E W
Sbjct: 650 ------------------KTVQSLTFLYTLMKEGHCKGPFLIAAPLSTIINWEREAEQWC 691
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTGIRG 161
F V+ G + R+ L EF FV+ ++G +
Sbjct: 692 --------PDFYVVTYVGDRDSRVVLREHEFSFVEGAVRSGPKA 727
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
F+ + K G +GPFL+ APLSTI NW+RE E W D V+ Y G R
Sbjct: 657 FLYTLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGDR 703
>gi|17562600|ref|NP_504523.1| Protein LET-418 [Caenorhabditis elegans]
gi|403399446|sp|G5EBZ4.1|LE418_CAEEL RecName: Full=Protein let-418; AltName: Full=Lethal protein 418
gi|11095333|gb|AAG29838.1| LET-418 [Caenorhabditis elegans]
gi|351020697|emb|CCD62685.1| Protein LET-418 [Caenorhabditis elegans]
Length = 1829
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 133/222 (59%), Gaps = 10/222 (4%)
Query: 291 GLKSASASRNMLQEYELFF------RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKD 344
GL+ A R +L+E+E F K +K + KFHVL+T++E I D L
Sbjct: 684 GLRDA---RVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVLLTSYETINMDKTILSS 740
Query: 345 FNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQF 404
W ++DEAHRLKN + L + +RVLL+GTPLQNN+ ELF LLNFL ++F
Sbjct: 741 IEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPLQNNLEELFHLLNFLSKERF 800
Query: 405 SNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKK 464
+ EAF +EF ++ E ++ KL LL P MLRRLK DV + K E +V VEL+ +QKK
Sbjct: 801 NQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKK 860
Query: 465 YYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+Y+ IL RNF L+ + +LMN +MEL+KCC HPYL
Sbjct: 861 WYKNILTRNFDALNVKNGGTQM-SLMNVLMELKKCCNHPYLF 901
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 77/151 (50%), Gaps = 34/151 (22%)
Query: 18 KLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
K E P Y + L YQLEGLNWL W NG + ILADEMGLG
Sbjct: 587 KYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLG-------------- 632
Query: 76 EMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVV 134
KT+QSLTF+ ++ K G +GPFL+ APLSTI NW+RE E W F V
Sbjct: 633 -----KTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQWC--------PDFYV 679
Query: 135 LLQTGSKFFRICL---EF-FVDAVFKTGIRG 161
+ G + R+ L EF FV+ ++G +
Sbjct: 680 VTYVGLRDARVVLREHEFSFVEGAVRSGPKA 710
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
F+ ++ K G +GPFL+ APLSTI NW+RE E W D V+ Y G R
Sbjct: 640 FLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLR 686
>gi|341891282|gb|EGT47217.1| CBN-LET-418 protein [Caenorhabditis brenneri]
Length = 1835
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 130/215 (60%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFF------RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +L+E+E F K +K + KFHVL+T++E I D L W +
Sbjct: 689 SRVVLREHEFSFVEGAVRSGPKAGKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALV 748
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN + L + +RVLL+GTPLQNN+ ELF LLNFL ++F+ EAF
Sbjct: 749 VDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPLQNNLEELFHLLNFLSAERFNQLEAFT 808
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
+EF ++ E ++ KL LL P MLRRLK DV + K E +V VEL+ +QKK+Y+ IL
Sbjct: 809 AEFSEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSPMQKKWYKNILT 868
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ + +LMN +MEL+KCC HPYL
Sbjct: 869 RNFDALNVKNGGTQM-SLMNVLMELKKCCNHPYLF 902
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 84/164 (51%), Gaps = 34/164 (20%)
Query: 5 KKPKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++PKK+ K E P Y ++ TL YQLEG+NWL W NG + ILADEMGLG
Sbjct: 575 RRPKKREKVDIRKKYEVQPDYVSETGGTLHPYQLEGINWLRHCWSNGTDAILADEMGLG- 633
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
KT+QSLTF+ + K G +GPFL+ APLSTI NW+RE E W
Sbjct: 634 ------------------KTVQSLTFLYTLMKEGHCKGPFLIAAPLSTIINWEREAEQWC 675
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTGIRG 161
F V+ G + R+ L EF FV+ ++G +
Sbjct: 676 --------PDFYVVTYVGDRDSRVVLREHEFSFVEGAVRSGPKA 711
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
F+ + K G +GPFL+ APLSTI NW+RE E W D V+ Y G R
Sbjct: 641 FLYTLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGDR 687
>gi|196008026|ref|XP_002113879.1| hypothetical protein TRIADDRAFT_27056 [Trichoplax adhaerens]
gi|190584283|gb|EDV24353.1| hypothetical protein TRIADDRAFT_27056, partial [Trichoplax
adhaerens]
Length = 871
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 142/216 (65%), Gaps = 12/216 (5%)
Query: 299 RNMLQEYELFFRNDK-----NQFIK--EKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
R +++E+E F+R+++ N+ +K +K KFHVL+T++E+I D L+ +W++ I
Sbjct: 346 RKVIREHE-FYRDEQSDSKGNKAVKPKKKSFLKFHVLLTSYELITIDAPILQSIDWKVLI 404
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L +++LL+GTPLQNN+ EL++LLNFL P +F++ + F
Sbjct: 405 VDEAHRLKNNQSKFFRVLSSYKLGYKLLLTGTPLQNNLEELWNLLNFLSPDRFNSWQDFS 464
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
+F + E ++ KL LL P +LRR+K DV K I K E +V ++LT++QK YY+ IL
Sbjct: 465 MKFEDISKEDQIKKLNELLGPHLLRRMKADVMKGIPEKSEVIVRIDLTSMQKTYYKYILT 524
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G +L N +MEL+KCC HPYL+
Sbjct: 525 RNFEALNSRGNKHV---SLSNIVMELKKCCNHPYLI 557
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 69/115 (60%), Gaps = 23/115 (20%)
Query: 18 KLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
K ++ P + K TL AYQLEGLNWL FSW + ILADEMG
Sbjct: 244 KYDEQPDFISKTGGTLHAYQLEGLNWLRFSWAEETDTILADEMG---------------- 287
Query: 76 EMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
LGKTIQ+++F++++F + +GPFL+ PLST+ NW+REFE W +L V+ Y
Sbjct: 288 ---LGKTIQAISFLNSLFMENHCKGPFLISVPLSTVVNWEREFEMWAPNLYVVSY 339
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 150 FVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F++++F + +GPFL+ PLST+ NW+REFE W +L V+ Y G +
Sbjct: 297 FLNSLFMENHCKGPFLISVPLSTVVNWEREFEMWAPNLYVVSYVGDK 343
>gi|356555545|ref|XP_003546091.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
isoform 2 [Glycine max]
Length = 1064
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 127/188 (67%), Gaps = 6/188 (3%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 288 KFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGT 347
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF---GQLKTESEVNKLQLLLKPMMLRRLKE 440
PLQNN++EL+SLLNFL P+ FS+ E F F G+ + V +L +L+P +LRRLK
Sbjct: 348 PLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKS 407
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKCC
Sbjct: 408 DVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAG---GERKRLLNIAMQLRKCC 464
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 465 NHPYLFQG 472
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 189 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 232
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI+GP +V+AP ST+ NW E
Sbjct: 233 EF--RGIKGPHMVVAPKSTLGNWMNEI 257
>gi|356521899|ref|XP_003529588.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
[Glycine max]
Length = 1058
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 140/203 (68%), Gaps = 10/203 (4%)
Query: 312 DKNQFIKEKDLY--KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGL 369
D+ + I+E+ L KF V +T+FE++I + L+ F+WR IIDEAHR+KN N L + +
Sbjct: 268 DERKHIREELLVAGKFDVCVTSFEMVIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTM 327
Query: 370 RLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNK 425
RL + +R+L++GTPLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E++ V +
Sbjct: 328 RLYNTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETF-DEWFQISGENDEHEVVQQ 386
Query: 426 LQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSAN 485
L +L+P +LRRLK DVEK + PK+ET+++V ++ +QK+YY+ +L+++ ++ G
Sbjct: 387 LHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAG---GE 443
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N M+LRKCC HPYL G
Sbjct: 444 RKRLLNIAMQLRKCCNHPYLFQG 466
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 183 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 226
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 227 EF--RGITGPHMVVAPKSTLGNWMNEI 251
>gi|356549071|ref|XP_003542921.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
isoform 1 [Glycine max]
Length = 1069
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 130/189 (68%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 293 KFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGT 352
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL+SLLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 353 PLQNNLHELWSLLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 411
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKC
Sbjct: 412 SDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAG---GERKRLLNIAMQLRKC 468
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 469 CNHPYLFQG 477
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 194 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 237
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI+GP +V+AP ST+ NW E
Sbjct: 238 EF--RGIKGPHMVVAPKSTLGNWMNEI 262
>gi|17946168|gb|AAL49125.1| RE55932p [Drosophila melanogaster]
Length = 627
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 138/213 (64%), Gaps = 2/213 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKE-KDLYKFHVLITTFEIIISDCLELKDFNWRLCIID 353
+R +++++E+ F + ++E + YKF+V++T++E I D L +W ++D
Sbjct: 350 GKTARAVIRKHEISFEEVTTKTMRENQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVD 409
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRL++ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ + F +E
Sbjct: 410 EAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAE 469
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L+P MLRRLK DV KS+ PK E +V VEL+++QKK+Y+ IL +N
Sbjct: 470 FTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKN 529
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
F L++ V +L+N MM+LRKCC HPYL
Sbjct: 530 FKALNQ-KGGGRVCSLLNIMMDLRKCCNHPYLF 561
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 23/115 (20%)
Query: 18 KLEKSPVYKNDNTLR--AYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
K E PV+ + L+ +Q+EG++WL +SW G ILADEMGL
Sbjct: 252 KYEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGL--------------- 296
Query: 76 EMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GKTIQ++ F+ ++FK G RGPFL+ PLST+ NW+RE E W +L + Y
Sbjct: 297 ----GKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTY 347
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++FK G RGPFL+ PLST+ NW+RE E W +L + Y G
Sbjct: 305 FLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVG 349
>gi|356555543|ref|XP_003546090.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
isoform 1 [Glycine max]
Length = 1072
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 130/189 (68%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 296 KFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGT 355
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL+SLLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 356 PLQNNLHELWSLLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 414
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKC
Sbjct: 415 SDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAG---GERKRLLNIAMQLRKC 471
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 472 CNHPYLFQG 480
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 197 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 240
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI+GP +V+AP ST+ NW E
Sbjct: 241 EF--RGIKGPHMVVAPKSTLGNWMNEI 265
>gi|356563853|ref|XP_003550172.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
[Glycine max]
Length = 1059
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 140/203 (68%), Gaps = 10/203 (4%)
Query: 312 DKNQFIKEKDLY--KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGL 369
D+ + I+E+ L KF V +T+FE++I + L+ F+WR IIDEAHR+KN N L + +
Sbjct: 269 DERKHIREELLVAGKFDVCVTSFEMVIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTM 328
Query: 370 RLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNK 425
RL + +R+L++GTPLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E++ V +
Sbjct: 329 RLYNTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETF-DEWFQISGENDEHEVVQQ 387
Query: 426 LQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSAN 485
L +L+P +LRRLK DVEK + PK+ET+++V ++ +QK+YY+ +L+++ ++ G
Sbjct: 388 LHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAG---GE 444
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N M+LRKCC HPYL G
Sbjct: 445 RKRLLNIAMQLRKCCNHPYLFQG 467
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 184 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 227
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 228 EF--RGITGPHMVVAPKSTLGNWMNEI 252
>gi|356549073|ref|XP_003542922.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
isoform 2 [Glycine max]
Length = 1062
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 127/188 (67%), Gaps = 6/188 (3%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 286 KFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGT 345
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF---GQLKTESEVNKLQLLLKPMMLRRLKE 440
PLQNN++EL+SLLNFL P+ FS+ E F F G+ + V +L +L+P +LRRLK
Sbjct: 346 PLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKS 405
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKCC
Sbjct: 406 DVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAG---GERKRLLNIAMQLRKCC 462
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 463 NHPYLFQG 470
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 49/87 (56%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 187 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 230
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI+GP +V+AP ST+ NW E
Sbjct: 231 EF--RGIKGPHMVVAPKSTLGNWMNEI 255
>gi|308501284|ref|XP_003112827.1| CRE-LET-418 protein [Caenorhabditis remanei]
gi|308267395|gb|EFP11348.1| CRE-LET-418 protein [Caenorhabditis remanei]
Length = 1884
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 130/215 (60%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFF------RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +L+E+E F K +K + KFHVL+T++E I D L W +
Sbjct: 684 SRVVLREHEFSFVEGAVRTGPKAGKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALV 743
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN + L + +RVLL+GTPLQNN+ ELF LLNFL ++F+ EAF
Sbjct: 744 VDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFT 803
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
+EF ++ E ++ KL LL P MLRRLK DV + K E +V VEL+ +QKK+Y+ IL
Sbjct: 804 AEFSEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSPMQKKWYKNILT 863
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ + +LMN +MEL+KCC HPYL
Sbjct: 864 RNFDALNVKNGGTQM-SLMNVLMELKKCCNHPYLF 897
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 83/164 (50%), Gaps = 34/164 (20%)
Query: 5 KKPKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++PKK+ K + P Y ++ L YQLEG+NWL W NG + ILADEMGLG
Sbjct: 570 RRPKKREKVDIRKKYDVQPDYVSETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLG- 628
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
KT+QSLTF+ + K G +GPFL+ APLSTI NW+RE E W
Sbjct: 629 ------------------KTVQSLTFLYTLMKEGHCKGPFLIAAPLSTIINWEREAELWC 670
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTGIRG 161
F V+ G + R+ L EF FV+ +TG +
Sbjct: 671 --------PDFYVVTYVGDRDSRVVLREHEFSFVEGAVRTGPKA 706
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
F+ + K G +GPFL+ APLSTI NW+RE E W D V+ Y G R
Sbjct: 636 FLYTLMKEGHCKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDR 682
>gi|25412286|pir||B84645 hypothetical protein At2g25170 [imported] - Arabidopsis thaliana
Length = 1359
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 124/185 (67%), Gaps = 2/185 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF VL+T++E+I D LK W I+DE HRLKN++ KL L HR+LL+GT
Sbjct: 393 KFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGT 452
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVE 443
PLQNN++ELF L++FL+ +F + E F EF + E ++++L +L P +LRR+K+DV
Sbjct: 453 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVM 512
Query: 444 KSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHP 503
K + PK+E ++ V+L+++QK+YY+ I RN+ L+K A + +L N MMELRK C HP
Sbjct: 513 KDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVLTK-KGGAQI-SLNNIMMELRKVCCHP 570
Query: 504 YLLNG 508
Y+L G
Sbjct: 571 YMLEG 575
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 61/102 (59%), Gaps = 21/102 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
L YQLEGLN+L FSW + ILADEMGLGKTIQS+ +LA
Sbjct: 273 LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSI---ALLA---------------- 313
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
++F+ + P LVIAPLST+ NW+REF W +NV++Y T
Sbjct: 314 SLFEENLI-PHLVIAPLSTLRNWEREFATWAPQMNVVMYFGT 354
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 162 PFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
P LVIAPLST+ NW+REF W +NV++Y G
Sbjct: 322 PHLVIAPLSTLRNWEREFATWAPQMNVVMYFG 353
>gi|18400745|ref|NP_565587.1| CHD3-type chromatin-remodeling factor PICKLE [Arabidopsis thaliana]
gi|75193642|sp|Q9S775.1|PKL_ARATH RecName: Full=CHD3-type chromatin-remodeling factor PICKLE;
AltName: Full=Protein GYMNOS
gi|6318930|gb|AAF07084.1|AF185578_1 GYMNOS/PICKLE [Arabidopsis thaliana]
gi|6478518|gb|AAF13875.1|AF185577_1 chromatin remodeling factor CHD3 [Arabidopsis thaliana]
gi|330252572|gb|AEC07666.1| CHD3-type chromatin-remodeling factor PICKLE [Arabidopsis thaliana]
Length = 1384
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 124/185 (67%), Gaps = 2/185 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF VL+T++E+I D LK W I+DE HRLKN++ KL L HR+LL+GT
Sbjct: 393 KFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGT 452
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVE 443
PLQNN++ELF L++FL+ +F + E F EF + E ++++L +L P +LRR+K+DV
Sbjct: 453 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVM 512
Query: 444 KSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHP 503
K + PK+E ++ V+L+++QK+YY+ I RN+ L+K A + +L N MMELRK C HP
Sbjct: 513 KDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVLTK-KGGAQI-SLNNIMMELRKVCCHP 570
Query: 504 YLLNG 508
Y+L G
Sbjct: 571 YMLEG 575
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 61/102 (59%), Gaps = 21/102 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
L YQLEGLN+L FSW + ILADEMGLGKTIQS+ +LA
Sbjct: 273 LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSI---ALLA---------------- 313
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
++F+ + P LVIAPLST+ NW+REF W +NV++Y T
Sbjct: 314 SLFEENLI-PHLVIAPLSTLRNWEREFATWAPQMNVVMYFGT 354
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 162 PFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
P LVIAPLST+ NW+REF W +NV++Y G
Sbjct: 322 PHLVIAPLSTLRNWEREFATWAPQMNVVMYFG 353
>gi|224100361|ref|XP_002311847.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222851667|gb|EEE89214.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 670
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 139/203 (68%), Gaps = 10/203 (4%)
Query: 312 DKNQFIKEKDLY--KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGL 369
D+ + I+E+ L KF V +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +
Sbjct: 296 DERKHIREELLVAGKFDVCVTSFEMAIKEKSTLRRFSWRYIIIDEAHRIKNENSLLSKTM 355
Query: 370 RLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNK 425
RL + +R+L++GTPLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E++ V +
Sbjct: 356 RLYNTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQ 414
Query: 426 LQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSAN 485
L +L+P +LRRLK DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G
Sbjct: 415 LHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAG---GE 471
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N M+LRKCC HPYL G
Sbjct: 472 RKRLLNIAMQLRKCCNHPYLFQG 494
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 211 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 254
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 255 EF--RGITGPHMVVAPKSTLGNWMNEI 279
>gi|341890749|gb|EGT46684.1| hypothetical protein CAEBREN_05565 [Caenorhabditis brenneri]
Length = 1728
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 133/216 (61%), Gaps = 7/216 (3%)
Query: 296 SASRNMLQEYELFF-----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLC 350
+ SR ++++ E F R K I+ ++ KFHVL+T++EII +D L NW
Sbjct: 674 AESREVIRDNEFSFAEKAVRAGKLSRIRNQNSLKFHVLLTSYEIINNDKAILSSINWDAL 733
Query: 351 IIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAF 410
++DEAHRLKN + L +R+LL+GTPLQNN++ELF LLNFL P +F+ E F
Sbjct: 734 VVDEAHRLKNNESLFFKNLLDYRFSYRLLLTGTPLQNNLDELFHLLNFLSPDRFNELETF 793
Query: 411 MSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGIL 470
+E ++ E ++NKL LL P MLRRLK DV + K E +V VEL+ +QK YY+ IL
Sbjct: 794 KAELSEISKEDQINKLHALLGPHMLRRLKADVLTGMPTKSELIVRVELSPMQKTYYKNIL 853
Query: 471 ERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ A V +L N ++EL+KCC HPYL
Sbjct: 854 TRNFEALNV-KNGAQV-SLNNILVELKKCCNHPYLF 887
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 62/113 (54%), Gaps = 21/113 (18%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
K E P Y TL YQLEG+NWL W G + ILADEMGLG
Sbjct: 577 KYETQPDYVTGGTLHPYQLEGINWLRHCWSTGTDAILADEMGLG---------------- 620
Query: 78 GLGKTIQSLTFVDAVFKTGIR-GPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
KTIQSLTF+ ++ K G GPFL+ APLSTI NW+RE E W D VI Y
Sbjct: 621 ---KTIQSLTFLYSLMKEGHSMGPFLIAAPLSTIRNWEREAEQWCPDFYVITY 670
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTGIR-GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++ K G GPFL+ APLSTI NW+RE E W D VI Y G
Sbjct: 628 FLYSLMKEGHSMGPFLIAAPLSTIRNWEREAEQWCPDFYVITYTG 672
>gi|413948163|gb|AFW80812.1| putative chromatin-remodeling factor family [Zea mays]
Length = 1113
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 131/189 (69%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +R+ + +R+L++GT
Sbjct: 325 KFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGT 384
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 385 PLQNNLHELWALLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 443
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKC
Sbjct: 444 SDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINAG---GERKRLLNIAMQLRKC 500
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 501 CNHPYLFQG 509
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 18/88 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 226 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 269
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFE 118
GI GP +V+AP ST+ NW +E +
Sbjct: 270 EF--RGITGPHMVVAPKSTLGNWMKEIQ 295
>gi|449455537|ref|XP_004145509.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like
[Cucumis sativus]
Length = 1474
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 142/224 (63%), Gaps = 12/224 (5%)
Query: 295 ASASRNMLQEYELFF--------RNDKNQFIKE--KDLYKFHVLITTFEIIISDCLELKD 344
+ +R +++EYE +F + Q + E +D KF VL+T++E+I D LK
Sbjct: 367 TAQARTVIREYEFYFPKNHKKVKKKKSGQIVSESKQDRIKFDVLLTSYEMINFDVGTLKP 426
Query: 345 FNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQF 404
W+ I+DE HRLKN++ KL L+ RVLL+GTPLQNN++ELF L++FL+ +F
Sbjct: 427 IKWQSLIVDEGHRLKNKDSKLFSSLKQFSSSLRVLLTGTPLQNNLDELFMLMHFLDAGKF 486
Query: 405 SNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKK 464
++ E F EF + E ++ +L +L P +LRR+K+DV K + PK+E ++ VEL++ QK+
Sbjct: 487 ASLEEFQEEFRDINQEEQILRLHRMLAPHLLRRVKKDVMKDLPPKKELILRVELSSKQKE 546
Query: 465 YYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
YY+ IL RN+ L++ A + +L+N +MELRK C H Y+L G
Sbjct: 547 YYKAILTRNYQLLTR-RGGAQI-SLINVVMELRKLCCHAYMLEG 588
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 21/123 (17%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
K ++ + + SP + + TL YQLEGLN+L +SW + ILADEMGL
Sbjct: 265 KKKQKEFQQYDSSPQFLSGGTLHPYQLEGLNFLRYSWSKQTHVILADEMGL--------- 315
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GKTIQS+ F+ ++++ I P LV+APLST+ NW+REF W +NV++Y
Sbjct: 316 ----------GKTIQSIAFLASLYEENI-APHLVVAPLSTLRNWEREFATWAPHMNVVMY 364
Query: 129 HAT 131
T
Sbjct: 365 VGT 367
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++++ I P LV+APLST+ NW+REF W +NV++Y G
Sbjct: 324 FLASLYEENI-APHLVVAPLSTLRNWEREFATWAPHMNVVMYVG 366
>gi|449466193|ref|XP_004150811.1| PREDICTED: putative chromatin-remodeling complex ATPase chain-like
[Cucumis sativus]
Length = 1073
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 131/189 (69%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL + +R+L++GT
Sbjct: 297 KFDVCVTSFEMAIKEKSCLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGT 356
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL+SLLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 357 PLQNNLHELWSLLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 415
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKC
Sbjct: 416 SDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVVNAG---GERKRLLNIAMQLRKC 472
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 473 CNHPYLFQG 481
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 198 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 241
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 242 EY--RGITGPHMVVAPKSTLGNWMNEI 266
>gi|297821893|ref|XP_002878829.1| PKL/SSL2 [Arabidopsis lyrata subsp. lyrata]
gi|297324668|gb|EFH55088.1| PKL/SSL2 [Arabidopsis lyrata subsp. lyrata]
Length = 1399
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/223 (41%), Positives = 139/223 (62%), Gaps = 12/223 (5%)
Query: 296 SASRNMLQEYELFFRND--------KNQFIKE--KDLYKFHVLITTFEIIISDCLELKDF 345
S +R +++E+E +F D Q E + KF VL+T++E+I D LK
Sbjct: 355 SQARAVIREHEFYFSKDKKKIKKKKSGQISSESKQKRIKFDVLLTSYEMINLDTAVLKPI 414
Query: 346 NWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFS 405
W I+DE HRLKN++ KL L HR+LL+GTPLQNN++ELF L++FL+ +F
Sbjct: 415 KWECMIVDEGHRLKNKDSKLFSSLTQYLSNHRILLTGTPLQNNLDELFMLMHFLDAGKFG 474
Query: 406 NNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKY 465
+ E F EF + E ++++L +L P +LRR+K+DV K + PK+E ++ V+L+++QK+Y
Sbjct: 475 SLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEY 534
Query: 466 YRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
Y+ I RN+ L+K A + +L N MMELRK C HPY+L G
Sbjct: 535 YKAIFTRNYQVLTK-KGGAQI-SLNNIMMELRKVCCHPYMLEG 575
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 61/102 (59%), Gaps = 21/102 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
L YQLEGLN+L FSW + ILADEMGLGKTIQS+ +LA
Sbjct: 273 LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSI---ALLA---------------- 313
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
++F+ + P LVIAPLST+ NW+REF W +NV++Y T
Sbjct: 314 SLFEENLI-PHLVIAPLSTLRNWEREFATWAPQMNVVMYFGT 354
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 162 PFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
P LVIAPLST+ NW+REF W +NV++Y G
Sbjct: 322 PHLVIAPLSTLRNWEREFATWAPQMNVVMYFG 353
>gi|194874037|ref|XP_001973329.1| GG16034 [Drosophila erecta]
gi|190655112|gb|EDV52355.1| GG16034 [Drosophila erecta]
Length = 869
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKE-KDLYKFHVLITTFEIIISDCLELKDFNWRLCIID 353
+ SR +++ EL F + ++E + YKF+V++T++E I D L +W + ++D
Sbjct: 324 SKTSRAVIRNNELSFDEITTKTMRENRAQYKFNVMLTSYEFIYIDAPLLGIIDWAVLVVD 383
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLK+ + K L + +++LL+GTPLQNN+ ELF LLNFL +F++ F +E
Sbjct: 384 EAHRLKSNHSKFFRTLSKYRIAYKLLLTGTPLQNNLEELFHLLNFLSSDKFNDLHTFQAE 443
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+++QKK+Y+ IL +N
Sbjct: 444 FADVSKEEQVKRLHEILGPHMLRRLKADVLKNMPSKSEFIVRVELSSMQKKFYKFILTKN 503
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
F L K V +L+N MMELRKCC HPYL
Sbjct: 504 FKAL-KQKGGGGVCSLLNIMMELRKCCNHPYLF 535
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 74/147 (50%), Gaps = 32/147 (21%)
Query: 6 KPKKKP-PASDW-VKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
+PK +P P +D K E PV+ D L +Q+EG++WL +SW ILADEMGL
Sbjct: 212 RPKNRPGPTTDLNKKYEDQPVFLKGADLKLHPFQMEGISWLRYSWGQSIRTILADEMGL- 270
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW 120
GKTIQ++ F+ ++FK G RGPFL+ PLST+ NW+RE E W
Sbjct: 271 ------------------GKTIQTVVFLYSLFKEGHCRGPFLICVPLSTLTNWERELELW 312
Query: 121 TDLNVIVYHATFVVLLQTGSKFFRICL 147
F + GSK R +
Sbjct: 313 A--------PEFYCITYGGSKTSRAVI 331
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ ++FK G RGPFL+ PLST+ NW+RE E W + I Y G +
Sbjct: 279 FLYSLFKEGHCRGPFLICVPLSTLTNWERELELWAPEFYCITYGGSK 325
>gi|357121631|ref|XP_003562521.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Brachypodium distachyon]
Length = 1734
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 138/217 (63%), Gaps = 9/217 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M Q++E F + +K FH LITT+E+I+ D L W ++DEAH
Sbjct: 685 ASREMCQQHEFFTNKKGGRHVK------FHTLITTYEVILKDKAVLSKIKWNYLMVDEAH 738
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN L L ++++L++GTPLQN+V EL++LL+FL+P +F++ + F+ +
Sbjct: 739 RLKNSEASLYIALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPVKFNSKDTFVERYKN 798
Query: 417 LKT--ESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + E+E+ L L+P +LRR+ +DVEKS+ PK E ++ +E++ +QK+YY+ ILERNF
Sbjct: 799 LSSFNETELANLHKELRPHILRRVIKDVEKSLPPKIERILRIEMSPLQKQYYKWILERNF 858
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 859 QNLNKGVRGNQV-SLLNVVVELKKCCNHPFLFESADH 894
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 69/122 (56%), Gaps = 20/122 (16%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
+KK AS +L+ P + LR YQLEGLN+L+ W N N ILADEMGLGKTIQS+
Sbjct: 578 RKKSKAS-LRRLDDQPEWLKGGKLRDYQLEGLNFLVNGWRNDTNVILADEMGLGKTIQSV 636
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVI 126
+ +G Q I GPFLV+ PLST+ NW +EF W D+NV+
Sbjct: 637 SM-------LGFLHNAQE-----------INGPFLVVVPLSTLSNWAKEFRKWLPDMNVV 678
Query: 127 VY 128
VY
Sbjct: 679 VY 680
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
I GPFLV+ PLST+ NW +EF W D+NV+VY G R
Sbjct: 648 INGPFLVVVPLSTLSNWAKEFRKWLPDMNVVVYVGNR 684
>gi|2660669|gb|AAC79140.1| human Mi-2 autoantigen-like protein [Arabidopsis thaliana]
gi|9758384|dbj|BAB08833.1| helicase-like protein [Arabidopsis thaliana]
Length = 2228
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 136/214 (63%), Gaps = 1/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ R ++++YE +N K+ YKF+VL+TT+E++++D L+ W + ++DE
Sbjct: 758 SAKGRAIIRDYEWHAKNSTG-TTKKPTSYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDE 816
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
HRLKN KL L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F F
Sbjct: 817 GHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEERF 876
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + +V +L+ L+ P MLRRLK+D ++I PK E +V VELT+IQ +YYR +L +N+
Sbjct: 877 HDLTSAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNY 936
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +++N +M+LRK C HPYL+ G
Sbjct: 937 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG 970
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 57/116 (49%), Gaps = 19/116 (16%)
Query: 17 VKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADE 76
V L + P L A+QLE LNWL W +N ILADEMGLGKT+ +
Sbjct: 661 VTLTEQPQELRGGALFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSA---------- 710
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHAT 131
S F+ G+ P LV+ PLST+PNW EF W LNV+ YH +
Sbjct: 711 --------SAFLSSLYFEFGVARPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGS 758
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHGRRK 195
F F+ G+ P LV+ PLST+PNW EF W LNV+ YHG K
Sbjct: 713 FLSSLYFEFGVARPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAK 760
>gi|334188199|ref|NP_199293.3| chromatin remodeling 4 protein [Arabidopsis thaliana]
gi|332007781|gb|AED95164.1| chromatin remodeling 4 protein [Arabidopsis thaliana]
Length = 2223
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 136/214 (63%), Gaps = 1/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ R ++++YE +N K+ YKF+VL+TT+E++++D L+ W + ++DE
Sbjct: 772 SAKGRAIIRDYEWHAKNSTG-TTKKPTSYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDE 830
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
HRLKN KL L +HRVLL+GTPLQNN+ E+++LLNFL+P F + +F F
Sbjct: 831 GHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEERF 890
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + +V +L+ L+ P MLRRLK+D ++I PK E +V VELT+IQ +YYR +L +N+
Sbjct: 891 HDLTSAEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNY 950
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L +++N +M+LRK C HPYL+ G
Sbjct: 951 QILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG 984
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 57/116 (49%), Gaps = 19/116 (16%)
Query: 17 VKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADE 76
V L + P L A+QLE LNWL W +N ILADEMGLGKT+ +
Sbjct: 675 VTLTEQPQELRGGALFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSA---------- 724
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHAT 131
S F+ G+ P LV+ PLST+PNW EF W LNV+ YH +
Sbjct: 725 --------SAFLSSLYFEFGVARPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGS 772
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHGRRK 195
F F+ G+ P LV+ PLST+PNW EF W LNV+ YHG K
Sbjct: 727 FLSSLYFEFGVARPCLVLVPLSTMPNWLSEFSLWAPLLNVVEYHGSAK 774
>gi|449485189|ref|XP_004157094.1| PREDICTED: LOW QUALITY PROTEIN: CHD3-type chromatin-remodeling
factor PICKLE-like [Cucumis sativus]
Length = 1474
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 141/224 (62%), Gaps = 12/224 (5%)
Query: 295 ASASRNMLQEYELFF--------RNDKNQFIKE--KDLYKFHVLITTFEIIISDCLELKD 344
+ +R +++EYE +F + Q + E +D KF VL+T++E+I D LK
Sbjct: 367 TAQARTVIREYEFYFPKNHKKVKKKKSGQIVSESKQDRIKFDVLLTSYEMINFDVGTLKP 426
Query: 345 FNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQF 404
W+ I+DE HRLKN++ KL L+ RVLL+GTPLQNN++ELF L++FL+ +F
Sbjct: 427 IKWQSLIVDEGHRLKNKDSKLFSSLKQFSSSLRVLLTGTPLQNNLDELFMLMHFLDAGKF 486
Query: 405 SNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKK 464
++ E F EF + E ++ +L +L P +LRR+K+DV K + PK+E ++ VEL+ QK+
Sbjct: 487 ASLEEFQEEFRDINQEEQILRLHRMLAPHLLRRVKKDVMKDLPPKKELILRVELSGKQKE 546
Query: 465 YYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
YY+ IL RN+ L++ A + +L+N +MELRK C H Y+L G
Sbjct: 547 YYKAILTRNYQLLTR-RGGAQI-SLINVVMELRKLCCHAYMLEG 588
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 69/118 (58%), Gaps = 21/118 (17%)
Query: 15 DWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
++ + + SP + + TL YQLEGLN+L +SW + ILADEMGL
Sbjct: 270 EFQQYDSSPQFLSGGTLHPYQLEGLNFLRYSWSKQTHVILADEMGL-------------- 315
Query: 75 DEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
GKTIQS+ F+ ++++ I P LV+APLST+ NW+REF W +NV++Y T
Sbjct: 316 -----GKTIQSIAFLASLYEENI-APHLVVAPLSTLRNWEREFATWAPHMNVVMYVGT 367
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++++ I P LV+APLST+ NW+REF W +NV++Y G
Sbjct: 324 FLASLYEENI-APHLVVAPLSTLRNWEREFATWAPHMNVVMYVG 366
>gi|242051170|ref|XP_002463329.1| hypothetical protein SORBIDRAFT_02g041910 [Sorghum bicolor]
gi|241926706|gb|EER99850.1| hypothetical protein SORBIDRAFT_02g041910 [Sorghum bicolor]
Length = 1685
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 139/217 (64%), Gaps = 9/217 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M Q++E F + +K FH LITT+E+I+ D L W ++DEAH
Sbjct: 636 ASREMCQQHEFFSDKKGGRHVK------FHTLITTYEVILKDKAVLSKIKWNYLMVDEAH 689
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN L L ++++L++GTPLQN+V EL++LL+FL+P +F++ ++F+ +
Sbjct: 690 RLKNCEASLYTTLLEFSTKNKLLITGTPLQNSVEELWALLHFLDPVKFNSKDSFVERYKN 749
Query: 417 LKT--ESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + E+E+ L L+P +LRR+ +DVEKS+ PK E ++ VE++ +QK+YY+ ILERNF
Sbjct: 750 LSSFNETELANLHKELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 809
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 810 QNLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESADH 845
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+L+ P + LR YQLEGLN+L+ W N N ILADEMGLGKTIQS++ +
Sbjct: 538 RLDDQPEWLKAGKLRDYQLEGLNFLVNGWRNDTNVILADEMGLGKTIQSVSM-------L 590
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVY 128
G Q I GPFLV+ PLST+ NW +EF W ++NV++Y
Sbjct: 591 GFLHNAQE-----------INGPFLVVVPLSTLSNWAKEFRKWLPNMNVVIY 631
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
I GPFLV+ PLST+ NW +EF W ++NV++Y G R
Sbjct: 599 INGPFLVVVPLSTLSNWAKEFRKWLPNMNVVIYVGNR 635
>gi|242057381|ref|XP_002457836.1| hypothetical protein SORBIDRAFT_03g014780 [Sorghum bicolor]
gi|241929811|gb|EES02956.1| hypothetical protein SORBIDRAFT_03g014780 [Sorghum bicolor]
Length = 1070
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 131/189 (69%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +R+ + +R+L++GT
Sbjct: 293 KFDVCVTSFEMAIKEKSTLRRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGT 352
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 353 PLQNNLHELWALLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 411
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKC
Sbjct: 412 SDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINAG---GERKRLLNIAMQLRKC 468
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 469 CNHPYLFQG 477
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 18/88 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 194 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 237
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFE 118
GI GP +V+AP ST+ NW +E +
Sbjct: 238 EF--RGITGPHMVVAPKSTLGNWIKEIQ 263
>gi|414877443|tpg|DAA54574.1| TPA: putative chromatin-remodeling factor family [Zea mays]
Length = 913
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 131/189 (69%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +R+ + +R+L++GT
Sbjct: 136 KFDVCVTSFEMAIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGT 195
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 196 PLQNNLHELWALLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 254
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKC
Sbjct: 255 SDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINAG---GERKRLLNIAMQLRKC 311
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 312 CNHPYLFQG 320
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 18/88 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 37 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 80
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFE 118
GI GP +V+AP ST+ NW +E +
Sbjct: 81 EF--RGIAGPHMVVAPKSTLGNWMKEIQ 106
>gi|224110590|ref|XP_002315568.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222864608|gb|EEF01739.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1050
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 139/203 (68%), Gaps = 10/203 (4%)
Query: 312 DKNQFIKEKDLY--KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGL 369
D+ + I+E+ L KF V +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +
Sbjct: 268 DERKHIREELLAAGKFDVCVTSFEMAIKEKSTLRRFSWRYIIIDEAHRIKNENSLLSKTM 327
Query: 370 RLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNK 425
RL + +R+L++GTPLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E++ V +
Sbjct: 328 RLYNTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQ 386
Query: 426 LQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSAN 485
L +L+P +LRRLK DVEK + PK+ET+++V ++ +QK+YY+ +L+++ ++ G
Sbjct: 387 LHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNAG---GE 443
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N M+LRKCC HPYL G
Sbjct: 444 RKRLLNIAMQLRKCCNHPYLFQG 466
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q+++ L +
Sbjct: 183 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLQE--------------- 227
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
F+ GI GP +V+AP ST+ NW E
Sbjct: 228 --FR-GITGPHMVVAPKSTLGNWMNEI 251
>gi|123432105|ref|XP_001308354.1| SNF2 family N-terminal domain containing protein [Trichomonas
vaginalis G3]
gi|121890030|gb|EAX95424.1| SNF2 family N-terminal domain containing protein [Trichomonas
vaginalis G3]
Length = 1612
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 133/217 (61%), Gaps = 6/217 (2%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR ++ +E F +D+++ + F VLIT +E S+ K WR ++DE H
Sbjct: 320 ASREVILNFE-FTTDDESE-----NKVGFDVLITNYETFTSEFESFKPIEWRYLVLDEGH 373
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN K + L L EH LL+GTP+QNNV EL+SLL+ L P++F + F+ +FG
Sbjct: 374 RLKNHTGKCYQLLTQLTFEHCTLLTGTPIQNNVEELWSLLHLLHPKEFEDLPEFLEQFGH 433
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
+ + + LQ L++P +LRR K DVE ++ EET++EVELT IQK+YY +L N S
Sbjct: 434 IDDINTLQALQELIQPYILRRRKNDVEATLTKLEETIIEVELTRIQKQYYTTLLHENASV 493
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTYLL 513
L + T ++P+L N MM+LRK C HPYL+ G + +
Sbjct: 494 LMQQITGGSLPSLQNLMMQLRKVCNHPYLIKGASEFI 530
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 20/120 (16%)
Query: 12 PASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNC 71
P+ + L+ + + LR YQ++G+NWL++ ++ RN ILAD
Sbjct: 217 PSGTFTPLKTMSKADDGSELRDYQIDGVNWLLYCYYEHRNSILAD--------------- 261
Query: 72 ILADEMGLGKTIQSLTFVDAVFK-TGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
EMGLGKT+Q + + + + T I GPFLVI+PLST+ W+REFE W+DLN +V+H
Sbjct: 262 ----EMGLGKTVQIVMTLKKISEITKINGPFLVISPLSTLQQWRREFEKWSDLNTVVFHG 317
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 31/37 (83%)
Query: 157 TGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGR 193
T I GPFLVI+PLST+ W+REFE W+DLN +V+HG+
Sbjct: 282 TKINGPFLVISPLSTLQQWRREFEKWSDLNTVVFHGK 318
>gi|297812047|ref|XP_002873907.1| hypothetical protein ARALYDRAFT_488746 [Arabidopsis lyrata subsp.
lyrata]
gi|297319744|gb|EFH50166.1| hypothetical protein ARALYDRAFT_488746 [Arabidopsis lyrata subsp.
lyrata]
Length = 1074
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 130/189 (68%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF + +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 293 KFDICVTSFEMAIKEKTSLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGT 352
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 353 PLQNNLHELWALLNFLLPEVFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 411
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YY+ +L+++ ++ G L+N M+LRKC
Sbjct: 412 SDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGG---GERKRLLNIAMQLRKC 468
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 469 CNHPYLFQG 477
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 194 LRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLAYLH 237
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 238 EY--RGINGPHMVVAPKSTLGNWMNEI 262
>gi|357447407|ref|XP_003593979.1| Chromatin remodeling complex subunit [Medicago truncatula]
gi|355483027|gb|AES64230.1| Chromatin remodeling complex subunit [Medicago truncatula]
Length = 1066
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 131/189 (69%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +R+ + +R+L++GT
Sbjct: 290 KFDVCVTSFEMAIKEKSTLRRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGT 349
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL+SLLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 350 PLQNNLHELWSLLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 408
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YY+ +L+++ ++ G L+N M+LRKC
Sbjct: 409 SDVEKGLPPKKETILKVGMSQLQKQYYKALLQKDLEVVNAG---GERKRLLNIAMQLRKC 465
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 466 CNHPYLFQG 474
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q+++ L +
Sbjct: 191 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHE--------------- 235
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
F+ GI+GP +V+AP ST+ NW E
Sbjct: 236 --FR-GIKGPHMVVAPKSTLGNWMNEI 259
>gi|30686915|ref|NP_568365.2| chromatin remodeling factor17 [Arabidopsis thaliana]
gi|332005204|gb|AED92587.1| chromatin remodeling factor17 [Arabidopsis thaliana]
Length = 1069
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 127/188 (67%), Gaps = 6/188 (3%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF + +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 293 KFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGT 352
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF---GQLKTESEVNKLQLLLKPMMLRRLKE 440
PLQNN++EL++LLNFL P+ FS+ E F F G+ + V +L +L+P +LRRLK
Sbjct: 353 PLQNNLHELWALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKS 412
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
DVEK + PK+ET+++V ++ +QK+YY+ +L+++ ++ G L+N M+LRKCC
Sbjct: 413 DVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGG---GERKRLLNIAMQLRKCC 469
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 470 NHPYLFQG 477
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 194 LRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLAYLH 237
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 238 EY--RGINGPHMVVAPKSTLGNWMNEI 262
>gi|218197711|gb|EEC80138.1| hypothetical protein OsI_21929 [Oryza sativa Indica Group]
gi|222635083|gb|EEE65215.1| hypothetical protein OsJ_20361 [Oryza sativa Japonica Group]
Length = 1309
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 141/224 (62%), Gaps = 13/224 (5%)
Query: 295 ASASRNMLQEYELFFRNDKNQFI-----------KEKDLYKFHVLITTFEIIISDCLELK 343
++ASR ++++YE ++ +K + + K++ KF VL+T++E+I D LK
Sbjct: 316 SAASREIIRKYEFYYPKEKPKKLKKKKSSPSNEDKKQSRIKFDVLLTSYEMINMDSTVLK 375
Query: 344 DFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQ 403
W I+DE HRLKN++ KL L+ H +HRVLL+GTP+QNN++ELF L++FLE
Sbjct: 376 TIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEGDS 435
Query: 404 FSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQK 463
F + EF + + +V KL +LKP +LRR K+DV K + PK+E ++ VELT+ QK
Sbjct: 436 FGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQK 495
Query: 464 KYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+YY+ IL +N+ L++ S +L+N +MELRK C H ++ +
Sbjct: 496 EYYKAILTKNYEVLTR--RSGGHVSLINVVMELRKLCCHAFMTD 537
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 21/112 (18%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+ ++SP + + TL YQLEGLN+L +SW++ + IL DEMGLG
Sbjct: 222 QYKESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLG---------------- 265
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
KTIQS+ F+ ++F + GP LV+APLST+ NW+REF W +NV++Y
Sbjct: 266 ---KTIQSIAFLGSLFVDKL-GPHLVVAPLSTLRNWEREFATWAPQMNVVMY 313
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 12/71 (16%)
Query: 128 YHATFVVL---LQTGSKFFRICL--EFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW 182
YH V+L + G I FVD + GP LV+APLST+ NW+REF W
Sbjct: 251 YHNKRVILGDEMGLGKTIQSIAFLGSLFVDKL------GPHLVVAPLSTLRNWEREFATW 304
Query: 183 T-DLNVIVYHG 192
+NV++Y G
Sbjct: 305 APQMNVVMYFG 315
>gi|30686918|ref|NP_850847.1| chromatin remodeling factor17 [Arabidopsis thaliana]
gi|332005205|gb|AED92588.1| chromatin remodeling factor17 [Arabidopsis thaliana]
Length = 1072
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 127/188 (67%), Gaps = 6/188 (3%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF + +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 293 KFDICVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGT 352
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF---GQLKTESEVNKLQLLLKPMMLRRLKE 440
PLQNN++EL++LLNFL P+ FS+ E F F G+ + V +L +L+P +LRRLK
Sbjct: 353 PLQNNLHELWALLNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKS 412
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
DVEK + PK+ET+++V ++ +QK+YY+ +L+++ ++ G L+N M+LRKCC
Sbjct: 413 DVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGG---GERKRLLNIAMQLRKCC 469
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 470 NHPYLFQG 477
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 194 LRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLAYLH 237
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 238 EY--RGINGPHMVVAPKSTLGNWMNEI 262
>gi|37542688|gb|AAL47203.1| chromatin-remodeling factor CHD3 [Oryza sativa Indica Group]
Length = 1111
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 141/224 (62%), Gaps = 13/224 (5%)
Query: 295 ASASRNMLQEYELFFRNDKNQFI-----------KEKDLYKFHVLITTFEIIISDCLELK 343
++ASR ++++YE ++ +K + + K++ KF VL+T++E+I D LK
Sbjct: 367 SAASREIIRKYEFYYPKEKPKKLKKKKSSPSNEDKKQSRIKFDVLLTSYEMINMDSTVLK 426
Query: 344 DFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQ 403
W I+DE HRLKN++ KL L+ H +HRVLL+GTP+QNN++ELF L++FLE
Sbjct: 427 TIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEGDS 486
Query: 404 FSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQK 463
F + EF + + +V KL +LKP +LRR K+DV K + PK+E ++ VELT+ QK
Sbjct: 487 FGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQK 546
Query: 464 KYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+YY+ IL +N+ L++ S +L+N +MELRK C H ++ +
Sbjct: 547 EYYKAILTKNYEVLTR--RSGGHVSLINVVMELRKLCCHAFMTD 588
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 70/115 (60%), Gaps = 21/115 (18%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+ ++SP + + TL YQLEGLN+L +SW++ + IL DEMGLGKTIQS+
Sbjct: 273 QYKESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIA--------- 323
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
+ SL FVD + GP LV+APLST+ NW+REF W +NV++Y +
Sbjct: 324 ----FLGSL-FVDKL------GPHLVVAPLSTLRNWEREFATWAPQMNVVMYFGS 367
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 7/45 (15%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
FVD + GP LV+APLST+ NW+REF W +NV++Y G
Sbjct: 328 LFVDKL------GPHLVVAPLSTLRNWEREFATWAPQMNVVMYFG 366
>gi|414887978|tpg|DAA63992.1| TPA: putative chromodomain helicase DNA binding protein [Zea mays]
Length = 1525
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 139/217 (64%), Gaps = 9/217 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M Q++E F + +K FH LITT+E+I+ D L W ++DEAH
Sbjct: 559 ASREMCQKHEFFSDKKGGRHVK------FHTLITTYEVILKDKAVLSKIKWNYLMVDEAH 612
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN L L ++++L++GTPLQN+V EL++LL+FL+P +F++ ++F+ +
Sbjct: 613 RLKNCEASLYTTLLEFSTKNKLLITGTPLQNSVEELWALLHFLDPVKFNSKDSFVERYKN 672
Query: 417 LKT--ESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + E+E+ L L+P +LRR+ +DVEKS+ PK E ++ VE++ +QK+YY+ ILERNF
Sbjct: 673 LSSFNETELANLHKELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 732
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 733 QNLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESADH 768
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 69/122 (56%), Gaps = 20/122 (16%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
+KK AS +L+ P + LR YQLEGLN+L+ W N N ILADEMGLGKTIQS+
Sbjct: 452 RKKSKAS-LRRLDDQPEWLKAGKLRDYQLEGLNFLVNGWRNDTNVILADEMGLGKTIQSV 510
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVI 126
+ +G Q I GPFLV+ PLST+ NW +EF W ++NV+
Sbjct: 511 SM-------LGFLHNAQE-----------INGPFLVVVPLSTLSNWAKEFRKWLPNMNVV 552
Query: 127 VY 128
+Y
Sbjct: 553 IY 554
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
I GPFLV+ PLST+ NW +EF W ++NV++Y G R
Sbjct: 522 INGPFLVVVPLSTLSNWAKEFRKWLPNMNVVIYVGNR 558
>gi|242023690|ref|XP_002432264.1| Chromodomain helicase-DNA-binding protein, putative [Pediculus
humanus corporis]
gi|212517673|gb|EEB19526.1| Chromodomain helicase-DNA-binding protein, putative [Pediculus
humanus corporis]
Length = 1999
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 136/216 (62%), Gaps = 7/216 (3%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
SR +++E EL F R + IK + KF+VL+T++E++ D L +W + ++
Sbjct: 789 SRAVIRENELSFEEGAVRGSRATKIKASSI-KFNVLLTSYELVSIDAACLGSIDWAVLVV 847
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLK+ K L ++ +++LL+GTPLQNN+ ELF LLNF+ +FS+ AF +
Sbjct: 848 DEAHRLKSNQSKFFRVLAGYNISYKLLLTGTPLQNNLEELFHLLNFMCRDKFSDLAAFQN 907
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF + E +V KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL R
Sbjct: 908 EFADISKEEQVTKLHDLLGPHMLRRLKTDVLKNMPAKSEFIVRVELSPMQKKYYKWILTR 967
Query: 473 NFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
NF L+ V +L+N MM+L+KCC HPYL +
Sbjct: 968 NFEALNPKGGGQQV-SLLNIMMDLKKCCNHPYLFSA 1002
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 73/126 (57%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP + KL+K P Y + L YQ+EGLNWL +SW G + ILADEMGL
Sbjct: 677 PPEKPLTNLSKKLDKQPDYIDATGMQLHEYQMEGLNWLRYSWGQGIDTILADEMGL---- 732
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G +GPFLV APLSTI NW+REFE W D
Sbjct: 733 ---------------GKTIQTITFLYSLYKEGHCKGPFLVSAPLSTIINWEREFETWAPD 777
Query: 123 LNVIVY 128
+ Y
Sbjct: 778 FYCVTY 783
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D + Y G +
Sbjct: 741 FLYSLYKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYCVTYVGDK 787
>gi|302833439|ref|XP_002948283.1| hypothetical protein VOLCADRAFT_80059 [Volvox carteri f.
nagariensis]
gi|300266503|gb|EFJ50690.1| hypothetical protein VOLCADRAFT_80059 [Volvox carteri f.
nagariensis]
Length = 1091
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 133/190 (70%), Gaps = 8/190 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
+F V++T++E++I + K F+WR IIDEAHR+KN N +L + +R L +R+L++GT
Sbjct: 269 RFDVVVTSYEMVIKEKNHFKRFHWRYIIIDEAHRIKNENSRLSQVVRQLKTNYRLLITGT 328
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF----GQLKTESE-VNKLQLLLKPMMLRRL 438
PLQNN++EL++LLNFL P+ FS+ E F F G + E+E V +L +L+P +LRR+
Sbjct: 329 PLQNNLHELWALLNFLLPEIFSSAEKFEEWFSMGDGSKEKEAEVVQQLHKVLRPFLLRRV 388
Query: 439 KEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRK 498
K DVE+ + PK+ET++++ ++++QKK+Y +L+++ L+ G A L+N +M+LRK
Sbjct: 389 KSDVERGLPPKKETILKIGMSDMQKKWYAALLQKDIDALNGGADRA---KLLNVVMQLRK 445
Query: 499 CCIHPYLLNG 508
CC HPYL G
Sbjct: 446 CCNHPYLFQG 455
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 18/100 (18%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+L+ P TLR YQ++GLNW++ + NG N ILADEMGLGKT+Q+++ L +
Sbjct: 157 RLQVQPSIITGGTLREYQMQGLNWMIHLYDNGINGILADEMGLGKTLQTISLVAYLYE-- 214
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +VI P ST+ NW EF
Sbjct: 215 ----------------YRGITGPHIVITPKSTLGNWVNEF 238
>gi|66809969|ref|XP_638708.1| chromo domain-containing protein [Dictyostelium discoideum AX4]
gi|60467321|gb|EAL65353.1| chromo domain-containing protein [Dictyostelium discoideum AX4]
Length = 1917
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 137/208 (65%), Gaps = 7/208 (3%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR++++ YE + N+ K+K F+VL+TT++ I+ D L W +DEAHR
Sbjct: 841 SRDIIRLYEFYT---TNRLGKKK--LNFNVLLTTYDFILKDKNTLGTIKWEFLAVDEAHR 895
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L+L + +R+L++GTPLQN++ EL++LLNFL P +F++ + F ++ L
Sbjct: 896 LKNSESVLHEVLKLYNTTNRLLVTGTPLQNSLKELWNLLNFLMPNKFTSLKDFQDQYSDL 955
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
K ++ +L +LKP +LRR+K+DVEKS+ PK E ++ V+L+N+QKKYY+ IL +NF L
Sbjct: 956 KENDQIAQLHSVLKPHLLRRIKKDVEKSLPPKTERILRVDLSNVQKKYYKWILTKNFQEL 1015
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYL 505
+KG L+N M EL+K C HPYL
Sbjct: 1016 NKGKGEKTT--LLNIMTELKKTCNHPYL 1041
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/118 (48%), Positives = 72/118 (61%), Gaps = 21/118 (17%)
Query: 16 WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
+ KL+ P + + TLR YQ+EGLNWL+ SW N N ILADEMGL
Sbjct: 740 FTKLDTQPSWISAGTLRDYQMEGLNWLVHSWMNNTNVILADEMGL--------------- 784
Query: 76 EMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHAT 131
GKTIQ+++F+ +F + I+GPFLV+ PLSTI NWQREF W +NVIVY T
Sbjct: 785 ----GKTIQTISFLSYLFNEQDIKGPFLVVVPLSTIENWQREFAKWAPAMNVIVYTGT 838
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHG 192
I+GPFLV+ PLSTI NWQREF W +NVIVY G
Sbjct: 803 IKGPFLVVVPLSTIENWQREFAKWAPAMNVIVYTG 837
>gi|22330875|ref|NP_187291.2| chromatin-remodeling protein 11 [Arabidopsis thaliana]
gi|357529491|sp|Q8RWY3.3|ISW2_ARATH RecName: Full=Putative chromatin-remodeling complex ATPase chain;
AltName: Full=ISW2-like; AltName: Full=Sucrose
nonfermenting protein 2 homolog
gi|332640865|gb|AEE74386.1| chromatin-remodeling protein 11 [Arabidopsis thaliana]
Length = 1055
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 130/189 (68%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF + +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 288 KFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGT 347
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 348 PLQNNLHELWALLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 406
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YY+ +L+++ ++ G L+N M+LRKC
Sbjct: 407 SDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAG---GERKRLLNIAMQLRKC 463
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 464 CNHPYLFQG 472
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 189 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLAYLH 232
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 233 EY--RGINGPHMVVAPKSTLGNWMNEI 257
>gi|334185131|ref|NP_001189826.1| chromatin-remodeling protein 11 [Arabidopsis thaliana]
gi|332640866|gb|AEE74387.1| chromatin-remodeling protein 11 [Arabidopsis thaliana]
Length = 1057
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 130/189 (68%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF + +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 288 KFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGT 347
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 348 PLQNNLHELWALLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 406
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YY+ +L+++ ++ G L+N M+LRKC
Sbjct: 407 SDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAG---GERKRLLNIAMQLRKC 463
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 464 CNHPYLFQG 472
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 189 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLAYLH 232
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 233 EY--RGINGPHMVVAPKSTLGNWMNEI 257
>gi|6437558|gb|AAF08585.1|AC011623_18 putative ATPase (ISW2-like) [Arabidopsis thaliana]
Length = 1057
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 130/189 (68%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF + +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 288 KFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGT 347
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 348 PLQNNLHELWALLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 406
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YY+ +L+++ ++ G L+N M+LRKC
Sbjct: 407 SDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAG---GERKRLLNIAMQLRKC 463
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 464 CNHPYLFQG 472
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 189 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLAYLH 232
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 233 EY--RGINGPHMVVAPKSTLGNWMNEI 257
>gi|37542684|gb|AAL47211.1| chromatin-remodeling factor CHD3 [Oryza sativa]
Length = 1360
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 141/224 (62%), Gaps = 13/224 (5%)
Query: 295 ASASRNMLQEYELFFRNDKNQFI-----------KEKDLYKFHVLITTFEIIISDCLELK 343
++ASR ++++YE ++ +K + + K++ KF VL+T++E+I D LK
Sbjct: 367 SAASREIIRKYEFYYPKEKPKKLKKKKSSPSNEDKKQSRIKFDVLLTSYEMINMDSTVLK 426
Query: 344 DFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQ 403
W I+DE HRLKN++ KL L+ H +HRVLL+GTP+QNN++ELF L++FLE
Sbjct: 427 TIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEGDS 486
Query: 404 FSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQK 463
F + EF + + +V KL +LKP +LRR K+DV K + PK+E ++ VELT+ QK
Sbjct: 487 FGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQK 546
Query: 464 KYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+YY+ IL +N+ L++ S +L+N +MELRK C H ++ +
Sbjct: 547 EYYKAILTKNYEVLTR--RSGGHVSLINVVMELRKLCCHAFMTD 588
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 21/112 (18%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+ ++SP + + TL YQLEGLN+L +SW++ + IL DEMGLG
Sbjct: 273 QYKESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLG---------------- 316
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
KTIQS+ F+ ++F + GP LV+APLST+ NW+REF W +NV++Y
Sbjct: 317 ---KTIQSIAFLGSLFVDKL-GPHLVVAPLSTLRNWEREFATWAPQMNVVMY 364
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 7/45 (15%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
FVD + GP LV+APLST+ NW+REF W +NV++Y G
Sbjct: 328 LFVDKL------GPHLVVAPLSTLRNWEREFATWAPQMNVVMYFG 366
>gi|384252115|gb|EIE25592.1| hypothetical protein COCSUDRAFT_46779 [Coccomyxa subellipsoidea
C-169]
Length = 1022
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 129/188 (68%), Gaps = 6/188 (3%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V++T++E++I + K F+WR IIDEAHR+KN N L +R +R+L++GT
Sbjct: 245 KFDVVVTSYEMVIKEKNHFKKFHWRYIIIDEAHRIKNENSILSRVVRTFKTNYRLLITGT 304
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE---VNKLQLLLKPMMLRRLKE 440
PLQNN++EL++LLNFL P+ FS+ E F F +SE V++L +L+P +LRRLK
Sbjct: 305 PLQNNLHELWALLNFLLPEVFSSAEKFDEWFNVQDKDSEAEVVSQLHKVLRPFLLRRLKS 364
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
DVEK + PK+ET++++ ++ +QKK+Y +L+++ ++ G A+ L+N +M+LRKCC
Sbjct: 365 DVEKGLPPKKETILKIGMSEMQKKFYAALLQKDIDAINGG---ADRSRLLNIVMQLRKCC 421
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 422 NHPYLFQG 429
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 58/114 (50%), Gaps = 19/114 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+L + P +R YQ++GLNWL+ + NG N ILADEMGLGKT+Q
Sbjct: 133 RLMQQPSVIKHGIMREYQMQGLNWLIHLYDNGINGILADEMGLGKTLQ------------ 180
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHA 130
TI L ++ GI GP +VI P ST+ NW EF W + + +H
Sbjct: 181 ----TISLLGYLQEY--RGIHGPHMVIVPKSTLHNWINEFRKWCPSIRAVKFHG 228
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRKK 196
GI GP +VI P ST+ NW EF W + + +HG +++
Sbjct: 193 GIHGPHMVIVPKSTLHNWINEFRKWCPSIRAVKFHGNQEE 232
>gi|334185133|ref|NP_001189827.1| chromatin-remodeling protein 11 [Arabidopsis thaliana]
gi|332640867|gb|AEE74388.1| chromatin-remodeling protein 11 [Arabidopsis thaliana]
Length = 1056
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 130/189 (68%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF + +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 288 KFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGT 347
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 348 PLQNNLHELWALLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 406
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YY+ +L+++ ++ G L+N M+LRKC
Sbjct: 407 SDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAG---GERKRLLNIAMQLRKC 463
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 464 CNHPYLFQG 472
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 189 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLAYLH 232
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 233 EY--RGINGPHMVVAPKSTLGNWMNEI 257
>gi|55771379|dbj|BAD72546.1| chromatin-remodeling factor CHD3 [Oryza sativa Japonica Group]
gi|55773904|dbj|BAD72509.1| chromatin-remodeling factor CHD3 [Oryza sativa Japonica Group]
Length = 1354
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/224 (39%), Positives = 141/224 (62%), Gaps = 13/224 (5%)
Query: 295 ASASRNMLQEYELFFRNDKNQFI-----------KEKDLYKFHVLITTFEIIISDCLELK 343
++ASR ++++YE ++ +K + + K++ KF VL+T++E+I D LK
Sbjct: 361 SAASREIIRKYEFYYPKEKPKKLKKKKSSPSNEDKKQSRIKFDVLLTSYEMINMDSTVLK 420
Query: 344 DFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQ 403
W I+DE HRLKN++ KL L+ H +HRVLL+GTP+QNN++ELF L++FLE
Sbjct: 421 TIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHRVLLTGTPVQNNLDELFMLMHFLEGDS 480
Query: 404 FSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQK 463
F + EF + + +V KL +LKP +LRR K+DV K + PK+E ++ VELT+ QK
Sbjct: 481 FGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQK 540
Query: 464 KYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+YY+ IL +N+ L++ S +L+N +MELRK C H ++ +
Sbjct: 541 EYYKAILTKNYEVLTR--RSGGHVSLINVVMELRKLCCHAFMTD 582
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 21/112 (18%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+ ++SP + + TL YQLEGLN+L +SW++ + IL DEMGLG
Sbjct: 267 QYKESPKFLSGGTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLG---------------- 310
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
KTIQS+ F+ ++F + GP LV+APLST+ NW+REF W +NV++Y
Sbjct: 311 ---KTIQSIAFLGSLFVDKL-GPHLVVAPLSTLRNWEREFATWAPQMNVVMY 358
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 7/45 (15%)
Query: 149 FFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
FVD + GP LV+APLST+ NW+REF W +NV++Y G
Sbjct: 322 LFVDKL------GPHLVVAPLSTLRNWEREFATWAPQMNVVMYFG 360
>gi|20259462|gb|AAM13851.1| putative ATPase (ISW2) [Arabidopsis thaliana]
Length = 1055
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 130/189 (68%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF + +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 288 KFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGT 347
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 348 PLQNNLHELWALLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 406
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YY+ +L+++ ++ G L+N M+LRKC
Sbjct: 407 SDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAG---GERKRLLNIAMQLRKC 463
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 464 CNHPYLFQG 472
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 189 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLAYLH 232
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 233 EY--RGINGPHMVVAPKSTLGNWMNEI 257
>gi|297829170|ref|XP_002882467.1| hypothetical protein ARALYDRAFT_477943 [Arabidopsis lyrata subsp.
lyrata]
gi|297328307|gb|EFH58726.1| hypothetical protein ARALYDRAFT_477943 [Arabidopsis lyrata subsp.
lyrata]
Length = 1055
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 130/189 (68%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF + +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 288 KFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGT 347
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 348 PLQNNLHELWALLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 406
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YY+ +L+++ ++ G L+N M+LRKC
Sbjct: 407 SDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAG---GERKRLLNIAMQLRKC 463
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 464 CNHPYLFQG 472
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 189 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLAYLH 232
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 233 EY--RGINGPHMVVAPKSTLGNWMNEI 257
>gi|344228405|gb|EGV60291.1| hypothetical protein CANTEDRAFT_127398 [Candida tenuis ATCC 10573]
Length = 1383
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 134/214 (62%), Gaps = 10/214 (4%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
SASR ++++YE F ND N+F KF++L+TT+E I+ D +EL W+ +DEA
Sbjct: 430 SASRRVIRDYE--FYNDNNKF-------KFNILLTTYEYILKDRIELGGIKWQFLAVDEA 480
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN L E L + +R+L++GTPLQNN+ EL +L NFL P +F + E
Sbjct: 481 HRLKNSESSLYESLISFKVTNRLLITGTPLQNNIKELSALCNFLMPGKFDIEQEIDFETP 540
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
+ E + LQ + P +LRRLK+DVEKS+ K E ++ VEL+++Q +YYR I+ +N+S
Sbjct: 541 NDEQEQYIKDLQKSIMPFILRRLKKDVEKSLPSKTERILRVELSDLQTEYYRNIITKNYS 600
Query: 476 FLSKGTTSANVP-NLMNTMMELRKCCIHPYLLNG 508
L+ GT N +L+N M EL+K HPYL +G
Sbjct: 601 ALNTGTGGKNSQISLLNVMNELKKASNHPYLFDG 634
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 62/112 (55%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL K PV+ + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 333 KLVKQPVFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQ------------ 380
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ L+++ ++ GP +++ PLST+P WQ FE W DLN I Y
Sbjct: 381 ----TVAFLSWL--IYARRQNGPHIIVVPLSTMPAWQETFEKWAPDLNCIYY 426
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRR 200
GP +++ PLST+P WQ FE W DLN I Y G SRR
Sbjct: 396 GPHIIVVPLSTMPAWQETFEKWAPDLNCIYYVGN--SASRR 434
>gi|357494019|ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
gi|355518633|gb|AET00257.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
Length = 1739
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 141/217 (64%), Gaps = 9/217 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR + Q+YE + NDK K KF+ L+TT+E+I+ D L W ++DEAH
Sbjct: 702 ASREVCQQYEFY--NDK----KPGKPIKFNALLTTYEVILKDKAVLSKIKWNYLMVDEAH 755
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN +L L ++++L++GTPLQN+V EL++LL+FL+P +F + + F+ +
Sbjct: 756 RLKNSEAQLYTSLLEFSTKNKLLITGTPLQNSVEELWALLHFLDPTKFKSKDEFVQNYKN 815
Query: 417 LKT--ESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + E+E+ L + L+P +LRR+ +DVEKS+ PK E ++ VE++ +QK+YY+ ILERNF
Sbjct: 816 LSSFHENELANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 875
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 876 QNLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESADH 911
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 75/130 (57%), Gaps = 20/130 (15%)
Query: 3 LIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++ +KK AS KLE+ P + LR YQLEGLN+L+ SW N N ILADEMGLGK
Sbjct: 590 VVDSQRKKSKAS-LRKLEEQPEWLMGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGK 648
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-T 121
T+QS++ +G + Q I GPFLV+ PLST+ NW +EF W
Sbjct: 649 TVQSVSM-------LGFLQNAQQ-----------IHGPFLVVVPLSTLSNWAKEFRKWLP 690
Query: 122 DLNVIVYHAT 131
D+N+IVY T
Sbjct: 691 DMNIIVYVGT 700
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
I GPFLV+ PLST+ NW +EF W D+N+IVY G R
Sbjct: 665 IHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTR 701
>gi|241948531|ref|XP_002416988.1| ATP-dependent chromodomain helicase, putative; chromodomain protein
1, putative [Candida dubliniensis CD36]
gi|223640326|emb|CAX44576.1| ATP-dependent chromodomain helicase, putative [Candida dubliniensis
CD36]
Length = 1406
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 134/211 (63%), Gaps = 10/211 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+R ++EYEL+ +N+K KF+VL+TT+E I+ D EL F W+ +DEAHR
Sbjct: 444 ARKTVREYELYNQNNKP---------KFNVLLTTYEYILKDRTELGAFKWQFLAVDEAHR 494
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L+ + +R+L++GTPLQNNV EL +L NFL P +F+ ++ E
Sbjct: 495 LKNAESSLYEALKSFRVSNRLLITGTPLQNNVKELAALCNFLMPGKFTIDQEIDFETIDS 554
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E + LQ + P +LRRLK+DVEKS+ K E ++ VEL++IQ +YY+ I+ +N++ L
Sbjct: 555 EQEQYIKDLQKKISPFILRRLKKDVEKSLPSKSERILRVELSDIQTEYYKNIITKNYAAL 614
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+ G + + +L+N M EL+K HPYL +G
Sbjct: 615 NAGNRGSQI-SLLNIMSELKKASNHPYLFDG 644
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 62/112 (55%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL K PV+ + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 345 KLFKQPVFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQ------------ 392
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ L+++ ++ GP LV+ PLST+P WQ FE W D+N + Y
Sbjct: 393 ----TVAFLSWL--IYARRQNGPHLVVVPLSTVPAWQETFEKWAPDVNCVYY 438
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GP LV+ PLST+P WQ FE W D+N + Y G
Sbjct: 408 GPHLVVVPLSTVPAWQETFEKWAPDVNCVYYMG 440
>gi|345314790|ref|XP_001520060.2| PREDICTED: chromodomain-helicase-DNA-binding protein 5-like,
partial [Ornithorhynchus anatinus]
Length = 1760
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 136/218 (62%), Gaps = 11/218 (5%)
Query: 298 SRNMLQEYELFF-----RNDKNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 514 SRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLV 573
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 574 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 633
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKK--YYRGI 469
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +Q K I
Sbjct: 634 EEFADISKEDQIKKLHDLLGPHMLRRLKVDVFKNMPAKTELIVRVELSQMQNKNNNLEFI 693
Query: 470 LERNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
L RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 694 LTRNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 729
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 77 MGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVVL 135
+G G T+Q++ + +++K G +GP+LV APLSTI NW+REFE W F V+
Sbjct: 455 LGQGTTVQTIVCLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA--------PDFYVV 506
Query: 136 LQTGSKFFRICL---EF-FVDAVFKTG 158
TG K R + EF F D ++G
Sbjct: 507 TYTGDKESRSVIRENEFSFEDNAIRSG 533
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 153 AVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
+++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 469 SLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 516
>gi|198466497|ref|XP_002135204.1| GA23929 [Drosophila pseudoobscura pseudoobscura]
gi|198150627|gb|EDY73831.1| GA23929 [Drosophila pseudoobscura pseudoobscura]
Length = 2036
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 134/213 (62%), Gaps = 5/213 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDL----YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
SR +++E EL F + K L YKF+VL+T++E+I D L +W + ++D
Sbjct: 822 SRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVD 881
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLK+ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ +AF E
Sbjct: 882 EAHRLKSNQSKFFRILNSYSIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGE 941
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKK+Y+ IL +N
Sbjct: 942 FADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKN 1001
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ L+ T + +L+N MM+L+KCC HPYL
Sbjct: 1002 YEALNSKTGGGSC-SLINIMMDLKKCCNHPYLF 1033
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 69/126 (54%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP K E P + ++ L YQ+EG+NWL +SW + ILADEMGL
Sbjct: 710 PPEKPTTDLKKKYEGQPAFLDETGMQLHPYQIEGINWLRYSWGQAIDTILADEMGL---- 765
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G RGPFLV PLST+ NW+REFE W D
Sbjct: 766 ---------------GKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPD 810
Query: 123 LNVIVY 128
I Y
Sbjct: 811 FYCITY 816
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV PLST+ NW+REFE W D I Y G +
Sbjct: 774 FLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDK 820
>gi|449496695|ref|XP_004160200.1| PREDICTED: LOW QUALITY PROTEIN: putative chromatin-remodeling
complex ATPase chain-like [Cucumis sativus]
Length = 1073
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 130/189 (68%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL + +R+L++GT
Sbjct: 297 KFDVCVTSFEMAIKEKSCLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGT 356
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL+SLLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 357 PLQNNLHELWSLLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 415
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + P +ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKC
Sbjct: 416 SDVEKGLPPXKETILKVGMSQMQKQYYRALLQKDLEVVNAG---GERKRLLNIAMQLRKC 472
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 473 CNHPYLFQG 481
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 198 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 241
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 242 EY--RGITGPHMVVAPKSTLGNWMNEI 266
>gi|297835980|ref|XP_002885872.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp.
lyrata]
gi|297331712|gb|EFH62131.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp.
lyrata]
Length = 1721
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 139/217 (64%), Gaps = 9/217 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR + Q+YE + + IK F+ L+TT+E+++ D L W ++DEAH
Sbjct: 707 ASREVCQQYEFYNEKKVGRPIK------FNALLTTYEVVLKDKAVLSKIKWIYLMVDEAH 760
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN +L L ++++L++GTPLQN+V EL++LL+FL+P +F N + F+ +
Sbjct: 761 RLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKN 820
Query: 417 LKT--ESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + ESE+ L L L+P +LRR+ +DVEKS+ PK E ++ VE++ +QK+YY+ ILERNF
Sbjct: 821 LSSFNESELANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 880
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 881 HDLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESADH 916
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 77/130 (59%), Gaps = 20/130 (15%)
Query: 3 LIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++++ + K AS KL++ P + + TLR YQLEGLN+L+ SW N N ILADEMGLGK
Sbjct: 595 MVEQQRTKGKAS-LRKLDEQPEWLSGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGK 653
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-T 121
T+QS++ +G + Q I GPFLV+ PLST+ NW +EF W
Sbjct: 654 TVQSVSM-------LGFLQNTQQ-----------IPGPFLVVVPLSTLANWAKEFRKWLP 695
Query: 122 DLNVIVYHAT 131
+N+IVY T
Sbjct: 696 GMNIIVYVGT 705
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
I GPFLV+ PLST+ NW +EF W +N+IVY G R
Sbjct: 670 IPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTR 706
>gi|302774573|ref|XP_002970703.1| hypothetical protein SELMODRAFT_411494 [Selaginella moellendorffii]
gi|300161414|gb|EFJ28029.1| hypothetical protein SELMODRAFT_411494 [Selaginella moellendorffii]
Length = 1538
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 138/217 (63%), Gaps = 16/217 (7%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M Q+YE F + + KF+ LITT+E+++ D L F W ++DEAH
Sbjct: 540 ASREMCQKYEFFTASGR---------AKFNTLITTYELVLKDKDVLSQFKWDFLMVDEAH 590
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAF--MSEF 414
RLKN L L +++VL++GTPLQNNV EL++LL+FL+P +F N + + + F
Sbjct: 591 RLKNNEAALYTELMKFSAKNKVLVTGTPLQNNVEELWALLHFLDPIKFRNKDDYKNLVSF 650
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
E+E+ +L L+P +LRR+ +DVEKS+ PK E ++ VE++ +QK+YY+ ILERNF
Sbjct: 651 ----NEAELARLHAELRPHLLRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 706
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
S L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 707 SDLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESADH 742
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 63/112 (56%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KLE+ P + LR YQLEGLN+L+ W N ILADEMGLGKT+QSL+ L
Sbjct: 442 KLEEQPEWLKGGKLRDYQLEGLNFLVNGWRMNTNVILADEMGLGKTVQSLSMLGYLQ--- 498
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVY 128
+ I GPFLV+ PLSTI NW +EF W ++NV+VY
Sbjct: 499 ---------------YNLEILGPFLVVVPLSTIANWAKEFRKWLPNMNVLVY 535
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHG 192
I GPFLV+ PLSTI NW +EF W ++NV+VY G
Sbjct: 503 ILGPFLVVVPLSTIANWAKEFRKWLPNMNVLVYVG 537
>gi|322799754|gb|EFZ20959.1| hypothetical protein SINV_16592 [Solenopsis invicta]
Length = 529
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 136/214 (63%), Gaps = 7/214 (3%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
SR +++E EL F R+ + I+ L KF+VL+T++E+I D L +W + ++
Sbjct: 80 SRIVIRENELSFEEGAVRSGRASKIRSS-LIKFNVLLTSYELISIDSACLGSIDWAVLVV 138
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLK+ K L ++ +++LL+GTPLQNN+ ELF LLNFL +F++ AF +
Sbjct: 139 DEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQN 198
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF + E +V KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL R
Sbjct: 199 EFADISKEDQVKKLHEMLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR 258
Query: 473 NFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
NF L+ V +L+N MM+L+KCC HPYL
Sbjct: 259 NFEALNPKGGGQQV-SLLNIMMDLKKCCNHPYLF 291
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 55/93 (59%), Gaps = 21/93 (22%)
Query: 38 GLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG- 96
GLNWL +SW G + ILADEMGL GKTIQ++TF+ +++K G
Sbjct: 1 GLNWLRYSWGQGIDTILADEMGL-------------------GKTIQTITFLYSLYKEGH 41
Query: 97 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
+GPFLV PLSTI NW+REFE W D + Y
Sbjct: 42 CKGPFLVSVPLSTIINWEREFETWAPDFYCVTY 74
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV PLSTI NW+REFE W D + Y G +
Sbjct: 32 FLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDK 78
>gi|150951142|ref|XP_001387415.2| ATPase component of a four subunit chromatin remodeling complex
[Scheffersomyces stipitis CBS 6054]
gi|149388353|gb|EAZ63392.2| ATPase component of a four subunit chromatin remodeling complex
[Scheffersomyces stipitis CBS 6054]
Length = 860
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 141/211 (66%), Gaps = 9/211 (4%)
Query: 307 LFFRNDKNQ---FIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRN 362
L + DK+Q ++E+ L KF V+I ++EI+I + K F+W IIDEAHR+KN
Sbjct: 52 LVIQGDKDQRQELLREQVLTCKFDVIIASYEIVIREKSTFKKFDWEYIIIDEAHRIKNEE 111
Query: 363 CKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF--GQLKTE 420
L + +R+ H ++R+L++GTPLQNN+ EL++LLNF+ P F++NE+F F + K +
Sbjct: 112 SLLSQIIRMFHSKNRLLITGTPLQNNLRELWALLNFILPDVFADNESFDEWFQSDEDKND 171
Query: 421 SE---VNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
SE V++L +LKP +LRR+K DVEKS+ PK+E V V+++ +Q+K+Y+ ILE++ +
Sbjct: 172 SEDTVVSQLHKVLKPFLLRRIKADVEKSLLPKQELNVYVKMSEMQRKWYQKILEKDIDAV 231
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+ + L+N +M+LRKCC HPYL G
Sbjct: 232 NGANKKESKTRLLNIVMQLRKCCNHPYLFEG 262
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 77 MGLGKTIQSLTFVDAV-FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
MGLGKT+Q+++F+ + F I GP +VI P ST+ NW REF W D+ V+V
Sbjct: 1 MGLGKTLQTISFLGYLRFIKHINGPHIVITPKSTLDNWAREFNRWIPDMKVLV 53
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG---RRKKLSRRDKERLRLKYV 210
F I GP +VI P ST+ NW REF W D+ V+V G +R++L R + +
Sbjct: 18 FIKHINGPHIVITPKSTLDNWAREFNRWIPDMKVLVIQGDKDQRQELLREQVLTCKFDVI 77
Query: 211 AADY 214
A Y
Sbjct: 78 IASY 81
>gi|145359958|ref|NP_178970.3| chromatin remodeling 5 [Arabidopsis thaliana]
gi|330251136|gb|AEC06230.1| chromatin remodeling 5 [Arabidopsis thaliana]
Length = 1724
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 139/217 (64%), Gaps = 9/217 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR + Q+YE + + IK F+ L+TT+E+++ D L W ++DEAH
Sbjct: 710 ASREVCQQYEFYNEKKVGRPIK------FNALLTTYEVVLKDKAVLSKIKWIYLMVDEAH 763
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN +L L ++++L++GTPLQN+V EL++LL+FL+P +F N + F+ +
Sbjct: 764 RLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKN 823
Query: 417 LKT--ESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + ESE+ L L L+P +LRR+ +DVEKS+ PK E ++ VE++ +QK+YY+ ILERNF
Sbjct: 824 LSSFNESELANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 883
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 884 HDLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESADH 919
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 76/130 (58%), Gaps = 20/130 (15%)
Query: 3 LIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++++ + K AS KL++ P + TLR YQLEGLN+L+ SW N N ILADEMGLGK
Sbjct: 598 MVEQQRTKGKAS-LRKLDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGK 656
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-T 121
T+QS++ +G + Q I GPFLV+ PLST+ NW +EF W
Sbjct: 657 TVQSVSM-------LGFLQNTQQ-----------IPGPFLVVVPLSTLANWAKEFRKWLP 698
Query: 122 DLNVIVYHAT 131
+N+IVY T
Sbjct: 699 GMNIIVYVGT 708
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
I GPFLV+ PLST+ NW +EF W +N+IVY G R
Sbjct: 673 IPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTR 709
>gi|302830624|ref|XP_002946878.1| hypothetical protein VOLCADRAFT_120343 [Volvox carteri f.
nagariensis]
gi|300267922|gb|EFJ52104.1| hypothetical protein VOLCADRAFT_120343 [Volvox carteri f.
nagariensis]
Length = 2539
Score = 170 bits (430), Expect = 2e-39, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 138/214 (64%), Gaps = 8/214 (3%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
S SR +L+ YE D K +KF VL+TT+E+I+ D L W ++DEA
Sbjct: 663 SRSREVLRAYEC----DPASHHKSSRPHKFEVLLTTYELILKDAQILSRIKWAYLLVDEA 718
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN L + L H ++++L++GTPLQN++ EL++LL+FL+P +F E F +E+
Sbjct: 719 HRLKNAESALYQELMEWHFKNKLLVTGTPLQNSLKELWALLHFLDPDKFPTCERFEAEY- 777
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
L+T V+ L +L+P +LRR+ +DVEKS+ PK E ++ V++T +QK+YY+ IL RNF
Sbjct: 778 SLETADSVSGLHGVLRPHLLRRVIKDVEKSLPPKNERILRVDMTPLQKQYYKWILTRNFK 837
Query: 476 FLSKGTTSANVP---NLMNTMMELRKCCIHPYLL 506
L+KG+ ++ +L+N + EL+KCC HP+L
Sbjct: 838 ELNKGSLGSHGGGHVSLLNIIGELKKCCNHPFLF 871
Score = 107 bits (267), Expect = 1e-20, Method: Composition-based stats.
Identities = 53/111 (47%), Positives = 66/111 (59%), Gaps = 19/111 (17%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
LEK P Y TLR YQ+E LNW+++SW RN ILADEMGLGKT+Q ++ LA+ +
Sbjct: 567 LEKQPEYLRGGTLRDYQMESLNWMIYSWSENRNIILADEMGLGKTVQCVSFVGYLAEAL- 625
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVY 128
IRGPFLV+ PLST+PNW REF W +N +VY
Sbjct: 626 -----------------QIRGPFLVVVPLSTVPNWIREFRRWVPFVNAVVY 659
Score = 54.7 bits (130), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 31/49 (63%), Gaps = 6/49 (12%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHGRRKKLSRRDKERLR 206
IRGPFLV+ PLST+PNW REF W +N +VY G R +E LR
Sbjct: 627 IRGPFLVVVPLSTVPNWIREFRRWVPFVNAVVYVG-----DSRSREVLR 670
>gi|302769197|ref|XP_002968018.1| hypothetical protein SELMODRAFT_440203 [Selaginella moellendorffii]
gi|300164756|gb|EFJ31365.1| hypothetical protein SELMODRAFT_440203 [Selaginella moellendorffii]
Length = 1234
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 126/188 (67%), Gaps = 6/188 (3%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + LK F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 299 KFDVCVTSFEMAIKERAALKKFSWRYIIIDEAHRIKNENSLLAKTMRLFSTNYRLLITGT 358
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF---GQLKTESEVNKLQLLLKPMMLRRLKE 440
PLQNN++EL++LLNFL P+ FS+ E F F G+ + + +L +L+P +LRRLK
Sbjct: 359 PLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVIQQLHKVLRPFLLRRLKS 418
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
DVE+ + PK+ET+++V ++ +Q+ YY+ +L+++ ++ G L+N M+LRKCC
Sbjct: 419 DVERGLPPKKETILKVGMSQMQRNYYKALLQKDIDAINTG---GERRRLLNIAMQLRKCC 475
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 476 NHPYLFQG 483
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 19/102 (18%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 200 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLAYLH 243
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHAT 131
GI GP +V+AP ST+ NW E + L +H T
Sbjct: 244 E--SRGISGPHMVVAPKSTLGNWMNEIRRFCPVLRAFKFHGT 283
>gi|189240851|ref|XP_001812556.1| PREDICTED: similar to chromodomain helicase-DNA-binding protein 3
[Tribolium castaneum]
Length = 1966
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/183 (47%), Positives = 122/183 (66%), Gaps = 1/183 (0%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF+VL+T++E+I D L W + ++DEAHRLK+ K L ++++++LL+GT
Sbjct: 838 KFNVLLTSYELISIDATCLGSIEWAVLVVDEAHRLKSNQSKFFRLLNSYNIQYKLLLTGT 897
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVE 443
PLQNN+ ELF LLNFL Q+F++ F +EF + E +V KL LL P MLRRLK DV
Sbjct: 898 PLQNNLEELFHLLNFLNSQKFNDLATFQNEFADISKEEQVKKLHELLGPHMLRRLKADVL 957
Query: 444 KSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHP 503
K++ K E +V VEL+ +QKKYY+ IL RNF L+ +V +L+N MM+L+KCC HP
Sbjct: 958 KNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQSV-SLLNIMMDLKKCCNHP 1016
Query: 504 YLL 506
YL
Sbjct: 1017 YLF 1019
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 74/126 (58%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP KL+K P Y +++ L YQLEGLNWL +SW G + ILADEMGL
Sbjct: 696 PPEKPITDLKKKLDKQPSYLDESGMQLHNYQLEGLNWLRYSWGQGIDTILADEMGL---- 751
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G +GPFLV PLSTI NW+REFE W D
Sbjct: 752 ---------------GKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPD 796
Query: 123 LNVIVY 128
VI Y
Sbjct: 797 FYVITY 802
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV PLSTI NW+REFE W D VI Y G +
Sbjct: 760 FLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYVITYVGDK 806
>gi|62319947|dbj|BAD94038.1| pseudogene [Arabidopsis thaliana]
Length = 1221
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 139/217 (64%), Gaps = 9/217 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR + Q+YE + + IK F+ L+TT+E+++ D L W ++DEAH
Sbjct: 710 ASREVCQQYEFYNEKKVGRPIK------FNALLTTYEVVLKDKAVLSKIKWIYLMVDEAH 763
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN +L L ++++L++GTPLQN+V EL++LL+FL+P +F N + F+ +
Sbjct: 764 RLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKN 823
Query: 417 LKT--ESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + ESE+ L L L+P +LRR+ +DVEKS+ PK E ++ VE++ +QK+YY+ ILERNF
Sbjct: 824 LNSFNESELANLHLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 883
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 884 HDLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESADH 919
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 76/130 (58%), Gaps = 20/130 (15%)
Query: 3 LIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++++ + K AS KL++ P + TLR YQLEGLN+L+ SW N N ILADEMGLGK
Sbjct: 598 MVEQQRTKGKAS-LRKLDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGK 656
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-T 121
T+QS++ +G + Q I GPFLV+ PLST+ NW +EF W
Sbjct: 657 TVQSVSM-------LGFLQNTQQ-----------IPGPFLVVVPLSTLANWAKEFRKWLP 698
Query: 122 DLNVIVYHAT 131
+N+IVY T
Sbjct: 699 GMNIIVYVGT 708
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
I GPFLV+ PLST+ NW +EF W +N+IVY G R
Sbjct: 673 IPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTR 709
>gi|270013510|gb|EFA09958.1| hypothetical protein TcasGA2_TC012115 [Tribolium castaneum]
Length = 1969
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/183 (47%), Positives = 122/183 (66%), Gaps = 1/183 (0%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF+VL+T++E+I D L W + ++DEAHRLK+ K L ++++++LL+GT
Sbjct: 841 KFNVLLTSYELISIDATCLGSIEWAVLVVDEAHRLKSNQSKFFRLLNSYNIQYKLLLTGT 900
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVE 443
PLQNN+ ELF LLNFL Q+F++ F +EF + E +V KL LL P MLRRLK DV
Sbjct: 901 PLQNNLEELFHLLNFLNSQKFNDLATFQNEFADISKEEQVKKLHELLGPHMLRRLKADVL 960
Query: 444 KSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHP 503
K++ K E +V VEL+ +QKKYY+ IL RNF L+ +V +L+N MM+L+KCC HP
Sbjct: 961 KNMPSKSEFIVRVELSPMQKKYYKYILTRNFEALNPKGGGQSV-SLLNIMMDLKKCCNHP 1019
Query: 504 YLL 506
YL
Sbjct: 1020 YLF 1022
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 74/126 (58%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP KL+K P Y +++ L YQLEGLNWL +SW G + ILADEMGL
Sbjct: 699 PPEKPITDLKKKLDKQPSYLDESGMQLHNYQLEGLNWLRYSWGQGIDTILADEMGL---- 754
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G +GPFLV PLSTI NW+REFE W D
Sbjct: 755 ---------------GKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPD 799
Query: 123 LNVIVY 128
VI Y
Sbjct: 800 FYVITY 805
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV PLSTI NW+REFE W D VI Y G +
Sbjct: 763 FLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYVITYVGDK 809
>gi|168037602|ref|XP_001771292.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162677381|gb|EDQ63852.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1032
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 142/214 (66%), Gaps = 10/214 (4%)
Query: 301 MLQEYELFFRNDKNQFIKEKDLY--KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
+L+ ++ D+ + +E+ L KF + +T+FE+ I + L+ F+WR IIDEAHR+
Sbjct: 242 VLRPFKFHGNQDERNYQREELLVAGKFDICVTSFEMAIKERTALRKFSWRYIIIDEAHRI 301
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK 418
KN + L + +RL +R+L++GTPLQNN++EL++LLNFL P+ FS+ E F E+ Q+
Sbjct: 302 KNESSILAKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETF-DEWFQIS 360
Query: 419 TESE----VNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
E++ V +L +L+P +LRRLK DVE+ + PK+ET+++V ++ +QK+YYR +L+++
Sbjct: 361 GENDQHEVVQQLHKVLRPFLLRRLKSDVERGLPPKKETILKVGMSTLQKQYYRALLQKDM 420
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
++ G L+N M+LRKCC HPYL G
Sbjct: 421 DAINTG---GERKRLLNIAMQLRKCCNHPYLFEG 451
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 47/87 (54%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 168 MREYQLAGLNWLIRLYENGVNGILADEMGLGKTLQ----------------TISLLAYLH 211
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+ P ST+ NW E
Sbjct: 212 EY--CGISGPHMVVGPKSTLGNWMNEI 236
>gi|302771908|ref|XP_002969372.1| hypothetical protein SELMODRAFT_440815 [Selaginella moellendorffii]
gi|300162848|gb|EFJ29460.1| hypothetical protein SELMODRAFT_440815 [Selaginella moellendorffii]
Length = 1544
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 138/217 (63%), Gaps = 16/217 (7%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M Q+YE F + + KF+ LITT+E+++ D L F W ++DEAH
Sbjct: 540 ASREMCQKYEFFTASGR---------AKFNTLITTYELVLKDKDVLSQFKWDFLMVDEAH 590
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAF--MSEF 414
RLKN L L +++VL++GTPLQNNV EL++LL+FL+P +F N + + + F
Sbjct: 591 RLKNNEAALYTELMKFSAKNKVLVTGTPLQNNVEELWALLHFLDPIKFRNKDDYKNLVSF 650
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
E+E+ +L L+P +LRR+ +DVEKS+ PK E ++ VE++ +QK+YY+ ILERNF
Sbjct: 651 ----NEAELARLHAELRPHLLRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 706
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
S L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 707 SDLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESADH 742
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 63/112 (56%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KLE+ P + LR YQLEGLN+L+ W N ILADEMGLGKT+QSL+ L
Sbjct: 442 KLEEQPEWLKGGKLRDYQLEGLNFLVNGWRMNTNVILADEMGLGKTVQSLSMLGYLQ--- 498
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVY 128
+ I GPFLV+ PLSTI NW +EF W ++NV+VY
Sbjct: 499 ---------------YNLEILGPFLVVVPLSTIANWAKEFRKWLPNMNVLVY 535
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHG 192
I GPFLV+ PLSTI NW +EF W ++NV+VY G
Sbjct: 503 ILGPFLVVVPLSTIANWAKEFRKWLPNMNVLVYVG 537
>gi|195166785|ref|XP_002024215.1| GL22908 [Drosophila persimilis]
gi|194107570|gb|EDW29613.1| GL22908 [Drosophila persimilis]
Length = 1898
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 134/213 (62%), Gaps = 5/213 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDL----YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
SR +++E EL F + K L YKF+VL+T++E+I D L +W + ++D
Sbjct: 680 SRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVD 739
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLK+ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ +AF E
Sbjct: 740 EAHRLKSNQSKFFRILNSYSIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGE 799
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKK+Y+ IL +N
Sbjct: 800 FADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKN 859
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ L+ T + +L+N MM+L+KCC HPYL
Sbjct: 860 YEALNSKTGGGSC-SLINIMMDLKKCCNHPYLF 891
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 69/126 (54%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP K E P + ++ L YQ+EG+NWL +SW + ILADEMGL
Sbjct: 568 PPEKPTTDLKKKYEGQPAFLDETGMQLHPYQIEGINWLRYSWGQAIDTILADEMGL---- 623
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G RGPFLV PLST+ NW+REFE W D
Sbjct: 624 ---------------GKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPD 668
Query: 123 LNVIVY 128
I Y
Sbjct: 669 FYCITY 674
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV PLST+ NW+REFE W D I Y G +
Sbjct: 632 FLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDK 678
>gi|222637616|gb|EEE67748.1| hypothetical protein OsJ_25446 [Oryza sativa Japonica Group]
Length = 1734
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 138/217 (63%), Gaps = 9/217 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR + Q++E F + +K FH LITT+E+I+ D L W ++DEAH
Sbjct: 682 ASREICQQHEFFTNKKGGRHVK------FHTLITTYEVILKDKAALSKIKWNYLMVDEAH 735
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN L L ++++L++GTPLQN+V EL++LL+FL+P +F++ + F+ +
Sbjct: 736 RLKNCEASLYTTLLEFSTKNKLLITGTPLQNSVEELWALLHFLDPSKFNSKDIFVERYKN 795
Query: 417 LKT--ESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + E+E+ L L+P +LRR+ +DVEKS+ PK E ++ V+++ +QK+YY+ ILERNF
Sbjct: 796 LSSFNETELANLHKELRPHILRRVIKDVEKSLPPKIERILRVDMSPLQKQYYKWILERNF 855
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 856 QNLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESADH 891
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 69/122 (56%), Gaps = 20/122 (16%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
+KK AS +L+ P + LR YQLEGLN+L+ W N N ILADEMGLGKTIQS+
Sbjct: 575 RKKSKAS-LRRLDDQPEWLKGGKLRDYQLEGLNFLVNGWRNDTNVILADEMGLGKTIQSV 633
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVI 126
+ +G Q I GPFLV+ PLST+ NW +EF W D+NV+
Sbjct: 634 SM-------LGFLHNAQE-----------INGPFLVVVPLSTLSNWAKEFRKWLPDMNVV 675
Query: 127 VY 128
VY
Sbjct: 676 VY 677
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
I GPFLV+ PLST+ NW +EF W D+NV+VY G R
Sbjct: 645 INGPFLVVVPLSTLSNWAKEFRKWLPDMNVVVYVGNR 681
>gi|340726708|ref|XP_003401695.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein Mi-2 homolog [Bombus terrestris]
Length = 1974
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 135/214 (63%), Gaps = 7/214 (3%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
SR +++E EL F R + I+ + KF+VL+T++E+I D L +W + ++
Sbjct: 815 SRIVIRENELSFEEGAVRGGRASKIRSNQI-KFNVLLTSYELISIDSACLGSIDWAVLVV 873
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLK+ K L ++ +++LL+GTPLQNN+ ELF LLNFL +F++ AF +
Sbjct: 874 DEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQN 933
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF + E +V KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL R
Sbjct: 934 EFADISKEEQVKKLHELLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR 993
Query: 473 NFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
NF L+ V +L+N MM+L+KCC HPYL
Sbjct: 994 NFEALNPKGGGQQV-SLLNIMMDLKKCCNHPYLF 1026
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 69/126 (54%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P KP K E+ P Y + L YQLEGLNWL +SW G + ILADEMGL
Sbjct: 703 PPDKPTTDLKKKYERQPEYLDQTGMQLHPYQLEGLNWLRYSWGQGIDTILADEMGL---- 758
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G +GPFLV PLSTI NW+REFE W D
Sbjct: 759 ---------------GKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPD 803
Query: 123 LNVIVY 128
+ Y
Sbjct: 804 FYCVTY 809
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV PLSTI NW+REFE W D + Y G +
Sbjct: 767 FLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDK 813
>gi|218200191|gb|EEC82618.1| hypothetical protein OsI_27196 [Oryza sativa Indica Group]
Length = 1734
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 138/217 (63%), Gaps = 9/217 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR + Q++E F + +K FH LITT+E+I+ D L W ++DEAH
Sbjct: 682 ASREICQQHEFFTNKKGGRHVK------FHTLITTYEVILKDKAALSKIKWNYLMVDEAH 735
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN L L ++++L++GTPLQN+V EL++LL+FL+P +F++ + F+ +
Sbjct: 736 RLKNCEASLYTTLLEFSTKNKLLITGTPLQNSVEELWALLHFLDPSKFNSKDIFVERYKN 795
Query: 417 LKT--ESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + E+E+ L L+P +LRR+ +DVEKS+ PK E ++ V+++ +QK+YY+ ILERNF
Sbjct: 796 LSSFNETELANLHKELRPHILRRVIKDVEKSLPPKIERILRVDMSPLQKQYYKWILERNF 855
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 856 QNLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESADH 891
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 69/122 (56%), Gaps = 20/122 (16%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
+KK AS +L+ P + LR YQLEGLN+L+ W N N ILADEMGLGKTIQS+
Sbjct: 575 RKKSKAS-LRRLDDQPEWLKGGKLRDYQLEGLNFLVNGWRNDTNVILADEMGLGKTIQSV 633
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVI 126
+ +G Q I GPFLV+ PLST+ NW +EF W D+NV+
Sbjct: 634 SM-------LGFLHNAQE-----------INGPFLVVVPLSTLSNWAKEFRKWLPDMNVV 675
Query: 127 VY 128
VY
Sbjct: 676 VY 677
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
I GPFLV+ PLST+ NW +EF W D+NV+VY G R
Sbjct: 645 INGPFLVVVPLSTLSNWAKEFRKWLPDMNVVVYVGNR 681
>gi|359477431|ref|XP_003631977.1| PREDICTED: putative chromatin-remodeling complex ATPase chain
isoform 2 [Vitis vinifera]
Length = 1068
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 126/188 (67%), Gaps = 6/188 (3%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 291 KFDVCVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGT 350
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF---GQLKTESEVNKLQLLLKPMMLRRLKE 440
PLQNN++EL+SLLNFL P+ F++ E F F G + V +L +L+P +LRRLK
Sbjct: 351 PLQNNLHELWSLLNFLLPEIFNSAETFDEWFQISGDNDQQEVVQQLHKVLRPFLLRRLKS 410
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
DVEK + PK+ET+++V ++ +QK++YR +L+++ ++ G L+N M+LRKCC
Sbjct: 411 DVEKGLPPKKETILKVGMSQLQKQFYRALLQKDLEVVNAG---GERKRLLNIAMQLRKCC 467
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 468 NHPYLFQG 475
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 192 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 235
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 236 EF--RGITGPHMVVAPKSTLGNWMNEI 260
>gi|345481883|ref|XP_001605650.2| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Nasonia vitripennis]
Length = 2009
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 135/214 (63%), Gaps = 7/214 (3%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
SR +++E EL F R + I+ + KF+VL+T++E+I D L +W + ++
Sbjct: 807 SRMVIRENELSFEEGAVRGGRASKIRSSQI-KFNVLLTSYELISIDSACLGSIDWAVLVV 865
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLK+ K L ++ +++LL+GTPLQNN+ ELF LLNFL +F++ AF +
Sbjct: 866 DEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLSAFQN 925
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF + E +V KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL R
Sbjct: 926 EFADISKEDQVKKLHEMLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR 985
Query: 473 NFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
NF L+ V +L+N MM+L+KCC HPYL
Sbjct: 986 NFEALNPKGGGQQV-SLLNIMMDLKKCCNHPYLF 1018
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 69/126 (54%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P KP K E+ P Y + L YQLEGLNWL +SW G + ILADEMGL
Sbjct: 695 PPDKPTTDLKKKYERQPEYLDCTGMQLHHYQLEGLNWLRYSWGQGIDTILADEMGL---- 750
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G +GPFLV PLSTI NW+REFE W D
Sbjct: 751 ---------------GKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPD 795
Query: 123 LNVIVY 128
+ Y
Sbjct: 796 FYCVTY 801
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV PLSTI NW+REFE W D + Y G +
Sbjct: 759 FLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDK 805
>gi|168035589|ref|XP_001770292.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162678509|gb|EDQ64967.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1031
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 130/189 (68%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF + +T+FE+ I + L+ F+WR IIDEAHR+KN + L + +RL +R+L++GT
Sbjct: 266 KFDICVTSFEMAIKERTALRKFSWRYIIIDEAHRIKNESSILAKTMRLFSTNYRLLITGT 325
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 326 PLQNNLHELWALLNFLLPEIFSSAETF-DEWFQISGENDQHEVVQQLHKVLRPFLLRRLK 384
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVE+ + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKC
Sbjct: 385 SDVERGLPPKKETILKVGMSTLQKQYYRALLQKDMDAINTG---GERKRLLNIAMQLRKC 441
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 442 CNHPYLFEG 450
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 167 MREYQLAGLNWLIRLYENGVNGILADEMGLGKTLQ----------------TISLLAYLH 210
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 211 EY--CGISGPHMVVAPKSTLGNWMNEI 235
>gi|225432366|ref|XP_002275787.1| PREDICTED: putative chromatin-remodeling complex ATPase chain
isoform 1 [Vitis vinifera]
gi|297736902|emb|CBI26103.3| unnamed protein product [Vitis vinifera]
Length = 1080
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 126/188 (67%), Gaps = 6/188 (3%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 303 KFDVCVTSFEMAIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYSTNYRLLITGT 362
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF---GQLKTESEVNKLQLLLKPMMLRRLKE 440
PLQNN++EL+SLLNFL P+ F++ E F F G + V +L +L+P +LRRLK
Sbjct: 363 PLQNNLHELWSLLNFLLPEIFNSAETFDEWFQISGDNDQQEVVQQLHKVLRPFLLRRLKS 422
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
DVEK + PK+ET+++V ++ +QK++YR +L+++ ++ G L+N M+LRKCC
Sbjct: 423 DVEKGLPPKKETILKVGMSQLQKQFYRALLQKDLEVVNAG---GERKRLLNIAMQLRKCC 479
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 480 NHPYLFQG 487
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 204 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 247
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 248 EF--RGITGPHMVVAPKSTLGNWMNEI 272
>gi|312372079|gb|EFR20122.1| hypothetical protein AND_20633 [Anopheles darlingi]
Length = 2227
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 136/215 (63%), Gaps = 9/215 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
SR +++E EL F R K I+ + KF+VL+T++E+I D L +W + ++
Sbjct: 900 SRAVIRENELSFEEGAVRGGKASRIRASSI-KFNVLLTSYELITIDAACLGSIDWSVLVV 958
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLK+ K + L ++ +++LL+GTPLQNN+ ELF LLNFL +F+ F S
Sbjct: 959 DEAHRLKSNQSKFFKVLNGYNIAYKLLLTGTPLQNNLEELFHLLNFLNKNKFNELAEFQS 1018
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL R
Sbjct: 1019 EFADISKEEQVKRLHEMLGPHMLRRLKADVLKNMPTKSEFIVRVELSPLQKKYYKYILTR 1078
Query: 473 NFSFLS-KGTTSANVPNLMNTMMELRKCCIHPYLL 506
N+ L+ KG A +L+N MM+L+KCC HPYL
Sbjct: 1079 NYEALNPKGGGGAC--SLINIMMDLKKCCNHPYLF 1111
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 72/126 (57%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDNTLR--AYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP KLE P Y ++ +R YQLEG+NWL +SW +G + ILADEMGL
Sbjct: 788 PPEKPTTDLKRKLEVQPPYLDETGMRLHPYQLEGINWLRYSWVHGTDTILADEMGL---- 843
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ+ TF+ +++K G RGPFLV PLSTI NW+REFE W D
Sbjct: 844 ---------------GKTIQTATFLYSLYKEGHCRGPFLVAVPLSTIINWEREFETWAPD 888
Query: 123 LNVIVY 128
I Y
Sbjct: 889 FYCITY 894
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLN 186
H T +L I F+ +++K G RGPFLV PLSTI NW+REFE W D
Sbjct: 831 HGTDTILADEMGLGKTIQTATFLYSLYKEGHCRGPFLVAVPLSTIINWEREFETWAPDFY 890
Query: 187 VIVYHGRRK 195
I Y G ++
Sbjct: 891 CITYVGDKE 899
>gi|350424653|ref|XP_003493868.1| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Bombus impatiens]
Length = 1965
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 135/214 (63%), Gaps = 7/214 (3%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
SR +++E EL F R + I+ + KF+VL+T++E+I D L +W + ++
Sbjct: 806 SRIVIRENELSFEEGAVRGGRASKIRSNQI-KFNVLLTSYELISIDSACLGSIDWAVLVV 864
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLK+ K L ++ +++LL+GTPLQNN+ ELF LLNFL +F++ AF +
Sbjct: 865 DEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQN 924
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF + E +V KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL R
Sbjct: 925 EFADISKEEQVKKLHELLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR 984
Query: 473 NFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
NF L+ V +L+N MM+L+KCC HPYL
Sbjct: 985 NFEALNPKGGGQQV-SLLNIMMDLKKCCNHPYLF 1017
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 69/126 (54%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P KP K E+ P Y + L YQLEGLNWL +SW G + ILADEMGL
Sbjct: 694 PPDKPTTDLKKKYERQPEYLDQTGMQLHPYQLEGLNWLRYSWGQGIDTILADEMGL---- 749
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G +GPFLV PLSTI NW+REFE W D
Sbjct: 750 ---------------GKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPD 794
Query: 123 LNVIVY 128
+ Y
Sbjct: 795 FYCVTY 800
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV PLSTI NW+REFE W D + Y G +
Sbjct: 758 FLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDK 804
>gi|344231498|gb|EGV63380.1| hypothetical protein CANTEDRAFT_106017 [Candida tenuis ATCC 10573]
Length = 1018
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 138/204 (67%), Gaps = 5/204 (2%)
Query: 310 RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++ +NQ I ++ + F V+I+++EI+I + LK F W IIDEAHR+KN L +
Sbjct: 223 KDQRNQLINQRLMTCDFDVVISSYEIVIREKSALKRFKWEYIIIDEAHRIKNEESLLSQI 282
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE---VNK 425
+R+ H +R+L++GTPLQNN++EL++LLNF+ P F ++EAF S F + + E V +
Sbjct: 283 IRMFHSNNRLLITGTPLQNNLHELWALLNFILPDVFGDSEAFDSWFQDNEGQDENSVVQQ 342
Query: 426 LQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSA 484
L +LKP +LRR+K +VEKS+ PKEE V V++T++QKK+Y+ ILE++ ++ +
Sbjct: 343 LHKVLKPFLLRRIKSEVEKSLLPKEELNVYVKMTDMQKKWYQKILEKDIDAVNGASGKKE 402
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
+ L+N +M+LRKCC HPYL G
Sbjct: 403 SKTRLLNIVMQLRKCCNHPYLFEG 426
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 64/108 (59%), Gaps = 20/108 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP Y + TLR YQ++GLNWL+ + N + ILADEMGLGKT+Q
Sbjct: 130 ESPAYVH-GTLRPYQIQGLNWLVSLYENNLSGILADEMGLGKTLQ--------------- 173
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ FK GI GP ++I P ST+ NW REF WT D+ V+V
Sbjct: 174 -TISFLGYL-RYFK-GINGPHIIITPKSTLDNWAREFARWTPDVRVLV 218
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP ++I P ST+ NW REF WT D+ V+V G + + ++ +RL
Sbjct: 186 GINGPHIIITPKSTLDNWAREFARWTPDVRVLVLQGDKDQRNQLINQRL 234
>gi|110777198|ref|XP_624414.2| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Apis mellifera]
Length = 1966
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 135/214 (63%), Gaps = 7/214 (3%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
SR +++E EL F R + I+ + KF+VL+T++E+I D L +W + ++
Sbjct: 806 SRIVIRENELSFEEGAVRGGRASKIRSNQI-KFNVLLTSYELISIDSACLGSIDWAVLVV 864
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLK+ K L ++ +++LL+GTPLQNN+ ELF LLNFL +F++ AF +
Sbjct: 865 DEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQN 924
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF + E +V KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL R
Sbjct: 925 EFADISKEEQVKKLHELLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR 984
Query: 473 NFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
NF L+ V +L+N MM+L+KCC HPYL
Sbjct: 985 NFEALNPKGGGQQV-SLLNIMMDLKKCCNHPYLF 1017
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 69/126 (54%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P KP K E+ P Y + L YQLEGLNWL +SW G + ILADEMGL
Sbjct: 694 PPDKPTTDLKKKYERQPEYLDQTGMQLHPYQLEGLNWLRYSWGQGIDTILADEMGL---- 749
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G +GPFLV PLSTI NW+REFE W D
Sbjct: 750 ---------------GKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPD 794
Query: 123 LNVIVY 128
+ Y
Sbjct: 795 FYCVTY 800
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV PLSTI NW+REFE W D + Y G +
Sbjct: 758 FLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDK 804
>gi|308806421|ref|XP_003080522.1| chromatin-remodelling complex ATPase ISWI2 (ISS) [Ostreococcus
tauri]
gi|116058982|emb|CAL54689.1| chromatin-remodelling complex ATPase ISWI2 (ISS) [Ostreococcus
tauri]
Length = 1036
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 128/190 (67%), Gaps = 9/190 (4%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V +T++E++I + LK F+WR IIDEAHRLKN N +L LR + +R+L++GTP
Sbjct: 273 FDVCVTSYEMVIKEKNALKRFHWRYIIIDEAHRLKNENSRLSLVLRTMSANNRMLITGTP 332
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE------VNKLQLLLKPMMLRRL 438
LQNN++EL++LLNFL P+ F N F FG ++ E V +L +L+P +LRRL
Sbjct: 333 LQNNLHELWALLNFLLPEVFGNAGQFEEWFGNVEDGEEGGSDAVVQQLHKVLRPFLLRRL 392
Query: 439 KEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRK 498
K +VE S+ PK+ET++++ +T +QK +Y+ IL+++ ++ G A+ L+N +M+LRK
Sbjct: 393 KTEVETSLPPKKETILKIGMTEMQKTFYKRILQKDIDIVNSG---ADRSRLLNIVMQLRK 449
Query: 499 CCIHPYLLNG 508
CC HPYL G
Sbjct: 450 CCNHPYLFQG 459
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 18/90 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNW++ + +G N ILADEMGLGKT+Q TI L ++
Sbjct: 173 MREYQLAGLNWMIRLFDHGINGILADEMGLGKTLQ----------------TISLLGYLH 216
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAW 120
GI GP +V+ P ST+ NW EF+ W
Sbjct: 217 EY--RGITGPHMVVVPKSTLGNWMNEFKRW 244
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHGRRKKLSRRDKERLRLKYV 210
GI GP +V+ P ST+ NW EF+ W + +HG + ++E L+ KY+
Sbjct: 220 GITGPHMVVVPKSTLGNWMNEFKRWCPVIRTFKFHG-----NAEEREALKAKYL 268
>gi|380020464|ref|XP_003694103.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein Mi-2 homolog [Apis florea]
Length = 1964
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 135/214 (63%), Gaps = 7/214 (3%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
SR +++E EL F R + I+ + KF+VL+T++E+I D L +W + ++
Sbjct: 805 SRIVIRENELSFEEGAVRGGRASKIRSNQI-KFNVLLTSYELISIDSACLGSIDWAVLVV 863
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLK+ K L ++ +++LL+GTPLQNN+ ELF LLNFL +F++ AF +
Sbjct: 864 DEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQN 923
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF + E +V KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL R
Sbjct: 924 EFADISKEEQVKKLHELLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR 983
Query: 473 NFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
NF L+ V +L+N MM+L+KCC HPYL
Sbjct: 984 NFEALNPKGGGQQV-SLLNIMMDLKKCCNHPYLF 1016
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 69/126 (54%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P KP K E+ P Y + L YQLEGLNWL +SW G + ILADEMGL
Sbjct: 693 PPDKPTTDLKKKYERQPEYLDQTGMQLHPYQLEGLNWLRYSWGQGIDTILADEMGL---- 748
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G +GPFLV PLSTI NW+REFE W D
Sbjct: 749 ---------------GKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPD 793
Query: 123 LNVIVY 128
+ Y
Sbjct: 794 FYCVTY 799
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV PLSTI NW+REFE W D + Y G +
Sbjct: 757 FLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDK 803
>gi|195496271|ref|XP_002095622.1| GE19602 [Drosophila yakuba]
gi|194181723|gb|EDW95334.1| GE19602 [Drosophila yakuba]
Length = 899
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 136/215 (63%), Gaps = 2/215 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
SR ++++ EL + + ++ K YKF+V++T++E+I D L +W + ++D
Sbjct: 351 GKTSRAVIRKNELSCKEVTTKTMRAKQTEYKFNVMLTSYELISLDVAFLGSIDWAVLVVD 410
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLKN K L + +++LL+GTPLQNN+ ELF LLNFL +F + + F ++
Sbjct: 411 EAHRLKNNQSKFFRMLNKYRIVYKLLLTGTPLQNNLEELFYLLNFLSSDKFDDLQTFQAK 470
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+++QKK+Y+ IL +N
Sbjct: 471 FADVAKEEQVKRLHEILAPHMLRRLKADVLKNMPSKAEFIVRVELSSMQKKFYKLILTKN 530
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
F L+K V +L+N MM+LRKCC HPYL +
Sbjct: 531 FKALNK-NGGGRVCSLLNIMMDLRKCCNHPYLFSS 564
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 24/126 (19%)
Query: 1 MSLIKKPKKKP-PASDW-VKLEKSPVYKNDNTLR--AYQLEGLNWLMFSWFNGRNCILAD 56
+S ++P+ +P P D K E PV+ + L+ +Q+EG++WL ++W G ILAD
Sbjct: 234 LSKKERPEDRPAPNMDLNKKYEDQPVFLKEAALKLHPFQMEGVSWLRYNWGQGIPTILAD 293
Query: 57 EMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQR 115
EMGL GKTIQ++ F+ ++FK G RGPFL+ PLST+ NW+R
Sbjct: 294 EMGL-------------------GKTIQTVVFLYSLFKEGHCRGPFLISVPLSTVANWER 334
Query: 116 EFEAWT 121
E E W
Sbjct: 335 ELELWA 340
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERLRL 207
F+ ++FK G RGPFL+ PLST+ NW+RE E W + I Y G + + K L
Sbjct: 306 FLYSLFKEGHCRGPFLISVPLSTVANWERELELWAPEFYCITYVGGKTSRAVIRKNELSC 365
Query: 208 KYVAA 212
K V
Sbjct: 366 KEVTT 370
>gi|383851360|ref|XP_003701201.1| PREDICTED: chromodomain-helicase-DNA-binding protein Mi-2 homolog
[Megachile rotundata]
Length = 1967
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 135/214 (63%), Gaps = 7/214 (3%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
SR +++E EL F R + I+ + KF+VL+T++E+I D L +W + ++
Sbjct: 807 SRIVIRENELSFEEGAVRGGRASKIRSNQI-KFNVLLTSYELISIDSACLGSIDWAVLVV 865
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLK+ K L ++ +++LL+GTPLQNN+ ELF LLNFL +F++ AF +
Sbjct: 866 DEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQN 925
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF + E +V KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL R
Sbjct: 926 EFADISKEEQVKKLHELLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR 985
Query: 473 NFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
NF L+ V +L+N MM+L+KCC HPYL
Sbjct: 986 NFEALNPKGGGQQV-SLLNIMMDLKKCCNHPYLF 1018
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 73/144 (50%), Gaps = 30/144 (20%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P KP K E+ P Y + L YQLEGLNWL +SW G + ILADEMGL
Sbjct: 695 PPDKPTTDLKKKYERQPEYLDQTGMQLHPYQLEGLNWLRYSWGQGIDTILADEMGL---- 750
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
GKTIQ++TF+ +++K G +GPFLV PLSTI NW+REFE W
Sbjct: 751 ---------------GKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWA-- 793
Query: 124 NVIVYHATFVVLLQTGSKFFRICL 147
F + G K RI +
Sbjct: 794 ------PDFYCVTYVGDKDSRIVI 811
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV PLSTI NW+REFE W D + Y G +
Sbjct: 759 FLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDK 805
>gi|123474505|ref|XP_001320435.1| SNF2 family N-terminal domain containing protein [Trichomonas
vaginalis G3]
gi|121903240|gb|EAY08212.1| SNF2 family N-terminal domain containing protein [Trichomonas
vaginalis G3]
Length = 1497
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 127/210 (60%), Gaps = 4/210 (1%)
Query: 299 RNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRL 358
R +++ E N K + I + +F VL+T +E ++ D D WR I DEAH+L
Sbjct: 375 RELIRRSEFNCLNSKGKIIP--NCVQFDVLVTNYETVLQDFNVFADIEWRYIIFDEAHKL 432
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLN--FLEPQQFSNNEAFMSEFGQ 416
KN KL + + L EH +L+GTP+QNN+ EL+ LL+ F++ F E F ++G
Sbjct: 433 KNSKGKLYKKVETLTFEHCTMLTGTPIQNNMEELWGLLHILFIDQPNFFTLEEFNEKYGN 492
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
+ ++V +Q L+KP+MLRR K DVE+SIA KEET+V VELT QKK+YR +L N S
Sbjct: 493 MTDSAQVKSIQKLIKPLMLRRKKSDVEQSIAAKEETIVRVELTRTQKKFYRALLSENAST 552
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
L + T + NL N M+LRK C HPYLL
Sbjct: 553 LLEQITGSAANNLQNIAMQLRKVCNHPYLL 582
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 81/122 (66%), Gaps = 18/122 (14%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
K+P A ++ +LE+SP K++ LR YQL+GLNWL F W+N RN ILADEMGLGKT Q+++
Sbjct: 267 KRPSAKEFKELEESPKSKHNYELRDYQLKGLNWLRFCWYNKRNNILADEMGLGKTAQTVS 326
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
++SL + +RGPFLV+APLST+P+W+ EFE W+ LN IVY
Sbjct: 327 -------------MLESLRKYE-----NVRGPFLVMAPLSTLPHWRNEFEEWSSLNTIVY 368
Query: 129 HA 130
H
Sbjct: 369 HG 370
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 30/34 (88%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
+RGPFLV+APLST+P+W+ EFE W+ LN IVYHG
Sbjct: 337 VRGPFLVMAPLSTLPHWRNEFEEWSSLNTIVYHG 370
>gi|302821505|ref|XP_002992415.1| hypothetical protein SELMODRAFT_162307 [Selaginella moellendorffii]
gi|300139831|gb|EFJ06565.1| hypothetical protein SELMODRAFT_162307 [Selaginella moellendorffii]
Length = 1016
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 126/188 (67%), Gaps = 6/188 (3%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + LK F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 238 KFDVCVTSFEMAIKERAALKKFSWRYIIIDEAHRIKNENSLLAKTMRLFSTNYRLLITGT 297
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF---GQLKTESEVNKLQLLLKPMMLRRLKE 440
PLQNN++EL++LLNFL P+ FS+ E F F G+ + + +L +L+P +LRRLK
Sbjct: 298 PLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVIQQLHKVLRPFLLRRLKS 357
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
DVE+ + PK+ET+++V ++ +Q+ YY+ +L+++ ++ G L+N M+LRKCC
Sbjct: 358 DVERGLPPKKETILKVGMSQMQRNYYKALLQKDIDAINTG---GERRRLLNIAMQLRKCC 414
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 415 NHPYLFQG 422
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 19/102 (18%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 139 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLAYLH 182
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHAT 131
GI GP +V+AP ST+ NW E + L +H T
Sbjct: 183 E--SRGISGPHMVVAPKSTLGNWMNEIRRFCPVLRAFKFHGT 222
>gi|332029993|gb|EGI69818.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
[Acromyrmex echinatior]
Length = 1852
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 136/214 (63%), Gaps = 7/214 (3%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
SR +++E EL F R+ + I+ + KF+VL+T++E+I D L +W + ++
Sbjct: 707 SRIVIRENELSFEEGAVRSGRASKIRSSSI-KFNVLLTSYELISIDSACLGSIDWAVLVV 765
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLK+ K L ++ +++LL+GTPLQNN+ ELF LLNFL +F++ AF +
Sbjct: 766 DEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQN 825
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF + E +V KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL R
Sbjct: 826 EFADISKEEQVKKLHEMLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR 885
Query: 473 NFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
NF L+ V +L+N MM+L+KCC HPYL
Sbjct: 886 NFEALNPKGGGQQV-SLLNIMMDLKKCCNHPYLF 918
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 69/126 (54%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P KP K E+ P Y + L YQLEGLNWL +SW G + ILADEMGL
Sbjct: 595 PPDKPTTDLKKKYERQPEYLDQTGMQLHHYQLEGLNWLRYSWGQGIDTILADEMGL---- 650
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G +GPFLV PLSTI NW+REFE W D
Sbjct: 651 ---------------GKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPD 695
Query: 123 LNVIVY 128
+ Y
Sbjct: 696 FYCVTY 701
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV PLSTI NW+REFE W D + Y G +
Sbjct: 659 FLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDK 705
>gi|320164602|gb|EFW41501.1| SNF2 family DNA-dependent ATPase [Capsaspora owczarzaki ATCC 30864]
Length = 2139
Score = 169 bits (428), Expect = 3e-39, Method: Composition-based stats.
Identities = 86/205 (41%), Positives = 128/205 (62%), Gaps = 20/205 (9%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KFHVL+T++EI+++D LK W ++DE HRLKN+ KL + L+ ++ HR+LL+GT
Sbjct: 690 KFHVLVTSYEILLADMSFLKSILWEELVVDEGHRLKNQESKLFKALQAFNIAHRLLLTGT 749
Query: 384 PLQNNVNELFSLLNFLEPQQFSN------NEAFMSEFGQLKTESEVNKLQLLLKPMMLRR 437
PLQNN+ ELF+L+ FL+ ++F +E ++ T V +L +L+P +LRR
Sbjct: 750 PLQNNLQELFNLMCFLDYEKFEQQREFIVDETLITSAPDEDTTDRVRRLHDMLRPHILRR 809
Query: 438 LKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSK-------GTTSANVPN-- 488
LK+DV + I PK E VV +++ +Q++YYR IL RN++ L++ GT S+ V
Sbjct: 810 LKDDVLQDIPPKTELVVPCKMSALQRQYYRAILTRNYAALNQGVQQVITGTKSSMVVQPQ 869
Query: 489 -----LMNTMMELRKCCIHPYLLNG 508
LMN +MELRKC HPYL G
Sbjct: 870 QQRVTLMNILMELRKCTNHPYLFPG 894
Score = 100 bits (250), Expect = 1e-18, Method: Composition-based stats.
Identities = 54/121 (44%), Positives = 69/121 (57%), Gaps = 20/121 (16%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
K P + +L+ P + L YQL+GLNWL+FS +S
Sbjct: 551 KNLPVIKFHELKSQPDFLQSGALHDYQLDGLNWLIFS-------------------RSRG 591
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
NCILADEMGLGKTIQ+++F+ +V+ PFLV+ PLS NW+REF WT DLNVIV
Sbjct: 592 VNCILADEMGLGKTIQTVSFLRSVYAQTQLHPFLVVTPLSLCSNWEREFGRWTPDLNVIV 651
Query: 128 Y 128
Y
Sbjct: 652 Y 652
Score = 51.6 bits (122), Expect = 0.001, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
F+ +V+ PFLV+ PLS NW+REF WT DLNVIVY G ++
Sbjct: 611 FLRSVYAQTQLHPFLVVTPLSLCSNWEREFGRWTPDLNVIVYTGSQE 657
>gi|307180140|gb|EFN68184.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
[Camponotus floridanus]
Length = 1960
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 136/214 (63%), Gaps = 7/214 (3%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
SR +++E EL F R+ + I+ + KF+VL+T++E+I D L +W + ++
Sbjct: 804 SRIVIRENELSFEEGAVRSGRASKIRSSSI-KFNVLLTSYELISIDSACLGSIDWAVLVV 862
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLK+ K L ++ +++LL+GTPLQNN+ ELF LLNFL +F++ AF +
Sbjct: 863 DEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQN 922
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF + E +V KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL R
Sbjct: 923 EFADISKEEQVKKLHEMLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR 982
Query: 473 NFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
NF L+ V +L+N MM+L+KCC HPYL
Sbjct: 983 NFEALNPKGGGQQV-SLLNIMMDLKKCCNHPYLF 1015
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 69/126 (54%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P KP K E+ P Y + L YQLEGLNWL +SW G + ILADEMGL
Sbjct: 692 PPDKPTTDLKKKYERQPEYLDQTGMQLHPYQLEGLNWLRYSWGQGIDTILADEMGL---- 747
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G +GPFLV PLSTI NW+REFE W D
Sbjct: 748 ---------------GKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPD 792
Query: 123 LNVIVY 128
+ Y
Sbjct: 793 FYCVTY 798
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV PLSTI NW+REFE W D + Y G +
Sbjct: 756 FLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDK 802
>gi|307199491|gb|EFN80104.1| Chromodomain-helicase-DNA-binding protein Mi-2-like protein
[Harpegnathos saltator]
Length = 1948
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 136/214 (63%), Gaps = 7/214 (3%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
SR +++E EL F R+ + I+ + KF+VL+T++E+I D L +W + ++
Sbjct: 805 SRIVIRENELSFEEGAVRSGRASKIRSSSI-KFNVLLTSYELISIDSACLGSIDWAVLVV 863
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLK+ K L ++ +++LL+GTPLQNN+ ELF LLNFL +F++ AF +
Sbjct: 864 DEAHRLKSNQSKFFRLLASYNIAYKLLLTGTPLQNNLEELFHLLNFLCRDKFNDLAAFQN 923
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF + E +V KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL R
Sbjct: 924 EFADISKEEQVKKLHEMLGPHMLRRLKADVLKNMPSKSEFIVRVELSPMQKKYYKYILTR 983
Query: 473 NFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
NF L+ V +L+N MM+L+KCC HPYL
Sbjct: 984 NFEALNPKGGGQQV-SLLNIMMDLKKCCNHPYLF 1016
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 69/126 (54%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P KP K E+ P Y + L YQLEGLNWL +SW G + ILADEMGL
Sbjct: 693 PPDKPTTDLKKKYERQPEYLDQTGMQLHPYQLEGLNWLRYSWGQGIDTILADEMGL---- 748
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G +GPFLV PLSTI NW+REFE W D
Sbjct: 749 ---------------GKTIQTITFLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPD 793
Query: 123 LNVIVY 128
+ Y
Sbjct: 794 FYCVTY 799
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV PLSTI NW+REFE W D + Y G +
Sbjct: 757 FLYSLYKEGHCKGPFLVSVPLSTIINWEREFETWAPDFYCVTYVGDK 803
>gi|356501409|ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Glycine max]
Length = 1767
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 141/217 (64%), Gaps = 9/217 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR + Q+YE + N+K K KF+ L+TT+E+++ D L W ++DEAH
Sbjct: 720 ASREVCQQYEFY--NEK----KPGKPIKFNALLTTYEVVLKDKAVLSKIKWNYLMVDEAH 773
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN +L L ++++L++GTPLQN+V EL++LL+FL+P +F + + F+ +
Sbjct: 774 RLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFRSKDEFVQNYKN 833
Query: 417 LKT--ESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + E+E+ L + L+P +LRR+ +DVEKS+ PK E ++ VE++ +QK+YY+ ILERNF
Sbjct: 834 LSSFNENELANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 893
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 894 HNLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESADH 929
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 75/130 (57%), Gaps = 20/130 (15%)
Query: 3 LIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++ +KK AS KLEK P + LR YQLEGLN+L+ SW N N ILADEMGLGK
Sbjct: 608 MVDSQRKKSKAS-LRKLEKQPEWLKGGELRDYQLEGLNFLVNSWRNDTNVILADEMGLGK 666
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-T 121
T+QS++ +G + Q I GPFLV+ PLST+ NW +EF W
Sbjct: 667 TVQSVSM-------LGFLQNAQQ-----------IHGPFLVVVPLSTLSNWAKEFRKWLP 708
Query: 122 DLNVIVYHAT 131
D+N+I+Y T
Sbjct: 709 DMNIIIYVGT 718
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
I GPFLV+ PLST+ NW +EF W D+N+I+Y G R
Sbjct: 683 IHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIIYVGTR 719
>gi|340500320|gb|EGR27208.1| myb domain protein [Ichthyophthirius multifiliis]
Length = 1057
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 139/216 (64%), Gaps = 11/216 (5%)
Query: 288 GTDGLKSASASRNMLQEYELFFRN--DKNQFIKEKDLYKFHVLITTFEIIISDCLE-LKD 344
G DG RN YE F+ + K F+ +++YKF VLIT+ +I +SD + D
Sbjct: 221 GQDG-------RNFCVNYESFYIDISTKGNFVFSQEIYKFQVLITSNQIFMSDLNNFILD 273
Query: 345 FNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQF 404
++ ++DEAH+LKN K L+ L+ + + +LL+GTP+QNN EL++LLN++EPQ+F
Sbjct: 274 IPFQFIVVDEAHKLKNSEAKFLQNLKKMPCKRVLLLTGTPIQNNTEELWTLLNYIEPQKF 333
Query: 405 SNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKK 464
S+ + F FG L+TE +VN LQ +KP +LRR+KEDVE SI P +ET++++E+T IQK
Sbjct: 334 SSLKEFKMNFGDLQTEEQVNNLQQTIKPYLLRRMKEDVENSIPPLQETIIDIEMTTIQKT 393
Query: 465 YYRGILERNFSFLSKGTTSANV-PNLMNTMMELRKC 499
YR I E+N L K +S + +L N M+LRKC
Sbjct: 394 IYRAIYEKNKGMLKKQFSSLVMGASLNNLEMQLRKC 429
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 20/93 (21%)
Query: 38 GLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVFK-TG 96
LNWL+ SW+N RN ILADEMGL GKTIQS++F++ ++
Sbjct: 144 SLNWLIESWYNKRNVILADEMGL-------------------GKTIQSISFINHLYTFEN 184
Query: 97 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
+RGPFL+IAPLST+ +W+R + WT+LN ++Y
Sbjct: 185 VRGPFLIIAPLSTLQHWKRTVDEWTNLNALLYQ 217
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSR 199
+RGPFL+IAPLST+ +W+R + WT+LN ++Y + + R
Sbjct: 184 NVRGPFLIIAPLSTLQHWKRTVDEWTNLNALLYQDEKGQDGR 225
>gi|195128581|ref|XP_002008741.1| GI13663 [Drosophila mojavensis]
gi|193920350|gb|EDW19217.1| GI13663 [Drosophila mojavensis]
Length = 1992
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 135/213 (63%), Gaps = 5/213 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDL----YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
SR +++E EL F + K L YKF+VL+T++E+I D L +W + ++D
Sbjct: 807 SRAVIRENELTFEEGAIRGTKVSRLRTTQYKFNVLLTSYELISMDAPCLGSIDWAVLVVD 866
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLK+ K L + +++LL+GTPLQNN+ ELF LLNFL ++F++ +AF E
Sbjct: 867 EAHRLKSNQSKFFRILNSYSIAYKLLLTGTPLQNNLEELFHLLNFLSREKFNDLQAFQGE 926
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKK+Y+ IL +N
Sbjct: 927 FADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKN 986
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ L+ + + +L+N MM+L+KCC HPYL
Sbjct: 987 YEALNSKSGGGSC-SLINIMMDLKKCCNHPYLF 1018
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 69/126 (54%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP K E P + D L YQ+EG+NWL +SW G + ILADEMGL
Sbjct: 695 PPEKPTTDLKKKYEGQPAFLEDTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGL---- 750
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G RGPFLV PLST+ NW+REFE W D
Sbjct: 751 ---------------GKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPD 795
Query: 123 LNVIVY 128
I Y
Sbjct: 796 FYCITY 801
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV PLST+ NW+REFE W D I Y G +
Sbjct: 759 FLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDK 805
>gi|356554106|ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Glycine max]
Length = 1764
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 141/217 (64%), Gaps = 9/217 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR + Q+YE + N+K K KF+ L+TT+E+++ D L W ++DEAH
Sbjct: 717 ASREVCQQYEFY--NEK----KPGKPIKFNALLTTYEVVLKDKAVLSKIKWNYLMVDEAH 770
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN +L L ++++L++GTPLQN+V EL++LL+FL+P +F + + F+ +
Sbjct: 771 RLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFRSKDEFVQNYKN 830
Query: 417 LKT--ESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + E+E+ L + L+P +LRR+ +DVEKS+ PK E ++ VE++ +QK+YY+ ILERNF
Sbjct: 831 LSSFNENELANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 890
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 891 HNLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESADH 926
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 75/130 (57%), Gaps = 20/130 (15%)
Query: 3 LIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++ +KK AS KLE+ P + LR YQLEGLN+L+ SW N N ILADEMGLGK
Sbjct: 605 MVDSQRKKSKAS-LRKLEEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGK 663
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-T 121
T+QS++ +G + Q I GPFLV+ PLST+ NW +EF W
Sbjct: 664 TVQSVSM-------LGFLQNAQQ-----------IHGPFLVVVPLSTLSNWAKEFRKWLP 705
Query: 122 DLNVIVYHAT 131
D+N+I+Y T
Sbjct: 706 DMNIIIYVGT 715
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
I GPFLV+ PLST+ NW +EF W D+N+I+Y G R
Sbjct: 680 IHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIIYVGTR 716
>gi|169606908|ref|XP_001796874.1| hypothetical protein SNOG_06505 [Phaeosphaeria nodorum SN15]
gi|160707107|gb|EAT86336.2| hypothetical protein SNOG_06505 [Phaeosphaeria nodorum SN15]
Length = 1108
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 136/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++D+ + IKE+ + KF V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 277 KDDRAELIKERLVDEKFDVCITSYEMILREKTHLKKFAWEYIIIDEAHRIKNEESSLAQM 336
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+RL + +R+L++GTPLQNN++EL++LLNFL P F ++ AF F Q T+S+ V +L
Sbjct: 337 VRLFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSAAFDEWFSQQDTDSDTVVQQL 396
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANV 486
+L+P +LRR+K DVEKS+ PK+E + V L+++Q +Y+ ILE++ ++ G +
Sbjct: 397 HKVLRPFLLRRVKADVEKSLLPKKEINLYVGLSDMQVDWYKKILEKDIDAVNGGAGNKES 456
Query: 487 PN-LMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 457 KTRLLNIVMQLRKCCNHPYLFEG 479
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 63/111 (56%), Gaps = 20/111 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + N +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 184 ESPGFIN-GVMRDYQVMGLNWLISLHENGISGILADEMGLGKTLQ--------------- 227
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
TI L ++ F GI GP LV+ P ST+ NW+REFE W ++NV+V
Sbjct: 228 -TISFLGYL--RFIAGITGPHLVVVPKSTLDNWKREFERWIPEINVLVLQG 275
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
F GI GP LV+ P ST+ NW+REFE W ++NV+V G + + KERL
Sbjct: 237 FIAGITGPHLVVVPKSTLDNWKREFERWIPEINVLVLQGNKDDRAELIKERL 288
>gi|238879188|gb|EEQ42826.1| chromo domain protein 1 [Candida albicans WO-1]
Length = 1410
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 10/211 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+R ++EYEL+ +N K KF+VL+TT+E I+ D EL F W+ +DEAHR
Sbjct: 448 ARKTIREYELYNQNRKP---------KFNVLLTTYEYILKDKNELGAFKWQFLAVDEAHR 498
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L+ + +R+L++GTPLQNNV EL +L NFL P +F+ ++ E
Sbjct: 499 LKNAESSLYEALKGFKVSNRLLITGTPLQNNVKELAALCNFLMPGKFTIDQEIDFETIDS 558
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E + LQ + P +LRRLK+DVEKS+ K E ++ VEL++IQ +YY+ I+ +N++ L
Sbjct: 559 EQEQYIKDLQKKISPFILRRLKKDVEKSLPSKSERILRVELSDIQTEYYKNIITKNYAAL 618
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+ G + + +L+N M EL+K HPYL +G
Sbjct: 619 NAGNRGSQI-SLLNIMSELKKASNHPYLFDG 648
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 62/112 (55%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL K PV+ + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 349 KLFKQPVFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQ------------ 396
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ L+++ ++ GP LV+ PLST+P WQ FE W D+N + Y
Sbjct: 397 ----TVAFLSWL--IYARRQNGPHLVVVPLSTVPAWQETFEKWAPDVNCVYY 442
Score = 45.1 bits (105), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GP LV+ PLST+P WQ FE W D+N + Y G
Sbjct: 412 GPHLVVVPLSTVPAWQETFEKWAPDVNCVYYLG 444
>gi|358339541|dbj|GAA47583.1| chromodomain-helicase-DNA-binding protein 4 [Clonorchis sinensis]
Length = 1670
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 135/215 (62%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFR------NDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++++E F K ++ +FHVL+T++E+I D L +W + +
Sbjct: 600 SRTVIRQHEFSFDEGAVRGGSKAMRLRSGTSVRFHVLLTSYELISIDQALLGSIDWEVLV 659
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L + +++LL+GTPLQNN+ ELF LL+F+ P++F + + F+
Sbjct: 660 VDEAHRLKNNQSKFFRILASYKIAYKLLLTGTPLQNNLEELFHLLHFMTPEKFHDMQGFL 719
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E +V KL +L +LRRLK DV +++ K E +V VEL+ +QK++Y+ IL
Sbjct: 720 DEFADISKEEQVKKLHDMLGQHLLRRLKADVLQNMPSKGEFIVRVELSPMQKRFYKFILT 779
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF LS + +NV +L+N MM+L+KCC HPYL
Sbjct: 780 RNFEALSCRSGGSNV-SLINIMMDLKKCCNHPYLF 813
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 74/129 (57%), Gaps = 27/129 (20%)
Query: 8 KKKPPASDWVKLEKS----PVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
+K PP L+K P Y +D L YQLEG+NWL FS+ N + ILADEMGL
Sbjct: 485 RKLPPDRCLTDLKKQYMTQPDYLDDTGGQLHEYQLEGVNWLRFSYGNKVDTILADEMGL- 543
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW 120
GKTIQ+++F+ +++K G RGPFLV APLSTI NW+REFE W
Sbjct: 544 ------------------GKTIQTISFLYSLYKEGHSRGPFLVAAPLSTIINWEREFEFW 585
Query: 121 T-DLNVIVY 128
DL V+ Y
Sbjct: 586 APDLYVVSY 594
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV APLSTI NW+REFE W DL V+ Y G +
Sbjct: 552 FLYSLYKEGHSRGPFLVAAPLSTIINWEREFEFWAPDLYVVSYVGDK 598
>gi|406607606|emb|CCH41077.1| Chromodomain-helicase-DNA-binding protein [Wickerhamomyces
ciferrii]
Length = 1487
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 134/213 (62%), Gaps = 11/213 (5%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ +R +++YE F+ N K KF+VL+TT+E I+ D EL W+ +DEA
Sbjct: 436 TEARKTIRDYE-FYNNKK---------IKFNVLLTTYEYILKDASELGSIKWQFLAVDEA 485
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F +E E
Sbjct: 486 HRLKNAESSLYESLNSFKVSNRLLITGTPLQNNIKELAALVNFLMPGKFEIDEEIDFEHS 545
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
E+ + LQ +KP +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N++
Sbjct: 546 NDDQENYIRDLQNKVKPFILRRLKKDVEKSLPSKTERILRVELSDLQTQYYKNILTKNYA 605
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L++G+ A+V +L+N M EL+K HPYL +
Sbjct: 606 ALNQGSKGAHV-SLLNVMSELKKASNHPYLFDA 637
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 339 KLVVQPKFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQ------------ 386
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ L+++ ++ GP +V+ PLSTIP WQ FE W+ DLN + Y
Sbjct: 387 ----TVSFLSWL--IYARRQNGPHIVVVPLSTIPAWQETFEKWSPDLNCVYY 432
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GP +V+ PLSTIP WQ FE W+ DLN + Y G
Sbjct: 402 GPHIVVVPLSTIPAWQETFEKWSPDLNCVYYLG 434
>gi|195020242|ref|XP_001985154.1| GH16907 [Drosophila grimshawi]
gi|193898636|gb|EDV97502.1| GH16907 [Drosophila grimshawi]
Length = 2013
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 5/213 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDL----YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
SR +++E EL F + K L YKF+VL+T++E+I D L +W + ++D
Sbjct: 815 SRAVIRENELTFEEGAIRGTKVSRLRTTQYKFNVLLTSYELISMDAPCLGSIDWAVLVVD 874
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLK+ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ +AF E
Sbjct: 875 EAHRLKSNQSKFFRILNSYAIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGE 934
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKK+Y+ IL +N
Sbjct: 935 FADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKN 994
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ L+ + + +L+N MM+L+KCC HPYL
Sbjct: 995 YEALNSKSGGGSC-SLINIMMDLKKCCNHPYLF 1026
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 70/126 (55%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP K E P + +D L YQ+EG+NWL +SW G + ILADEMGL
Sbjct: 703 PPEKPTTDLKKKYEGQPTFLDDTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGL---- 758
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G RGPFLV PLST+ NW+REFE W D
Sbjct: 759 ---------------GKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPD 803
Query: 123 LNVIVY 128
I Y
Sbjct: 804 FYCITY 809
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV PLST+ NW+REFE W D I Y G +
Sbjct: 767 FLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDK 813
>gi|340380649|ref|XP_003388834.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3 homolog
[Amphimedon queenslandica]
Length = 1451
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/216 (42%), Positives = 134/216 (62%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-------RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLC 350
+R +++E+E F + + Q +K+ KF+VL+T++E + D L+ NW +
Sbjct: 303 NRAIIREHEFSFVSGAVKGTSKQLQRVKKDLPIKFNVLLTSYEYVSVDATVLQSINWAVL 362
Query: 351 IIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAF 410
++DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL F++ E F
Sbjct: 363 VVDEAHRLKNNQSKFFRVLSQYKIKYKLLLTGTPLQNNLEELFHLLNFLSRDNFNSLEEF 422
Query: 411 MSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGIL 470
EF + E +V+KL +L P +LRRLK DV K+I K E +V V+L +QKK+YR IL
Sbjct: 423 QEEFADISKEDQVSKLHDMLAPHLLRRLKADVLKNIPSKTELIVRVDLAPMQKKFYRWIL 482
Query: 471 ERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+NF L+ T A +L+N MM+L+KC HPYL
Sbjct: 483 TKNFEKLN--TKGAKPVSLINIMMDLKKCSNHPYLF 516
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 65/110 (59%), Gaps = 21/110 (19%)
Query: 24 VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTI 83
+ + TL YQLEG+NW+ FSW N ILADEMG LGKTI
Sbjct: 210 ISQTGGTLHPYQLEGINWIRFSWAQNTNTILADEMG-------------------LGKTI 250
Query: 84 QSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
Q+++F+ ++ K G GPFL+ APLSTI NW+REFE W DL V+ YH +
Sbjct: 251 QTISFLYSLVKEGHTNGPFLISAPLSTIINWEREFEFWAPDLYVVTYHGS 300
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 146 CLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
+ F V + GPFL+ APLSTI NW+REFE W DL V+ YHG +
Sbjct: 252 TISFLYSLVKEGHTNGPFLISAPLSTIINWEREFEFWAPDLYVVTYHGSK 301
>gi|68468949|ref|XP_721533.1| hypothetical protein CaO19.3035 [Candida albicans SC5314]
gi|68469498|ref|XP_721262.1| hypothetical protein CaO19.10553 [Candida albicans SC5314]
gi|46443171|gb|EAL02455.1| hypothetical protein CaO19.10553 [Candida albicans SC5314]
gi|46443453|gb|EAL02735.1| hypothetical protein CaO19.3035 [Candida albicans SC5314]
Length = 1410
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 10/211 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+R ++EYEL+ +N K KF+VL+TT+E I+ D EL F W+ +DEAHR
Sbjct: 448 ARKTIREYELYNQNRKP---------KFNVLLTTYEYILKDKNELGAFKWQFLAVDEAHR 498
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L+ + +R+L++GTPLQNNV EL +L NFL P +F+ ++ E
Sbjct: 499 LKNAESSLYEALKGFKVSNRLLITGTPLQNNVKELAALCNFLMPGKFTIDQEIDFETIDS 558
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E + LQ + P +LRRLK+DVEKS+ K E ++ VEL++IQ +YY+ I+ +N++ L
Sbjct: 559 EQEQYIKDLQKKISPFILRRLKKDVEKSLPSKSERILRVELSDIQTEYYKNIITKNYAAL 618
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+ G + + +L+N M EL+K HPYL +G
Sbjct: 619 NAGNRGSQI-SLLNIMSELKKASNHPYLFDG 648
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 62/112 (55%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL K PV+ + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 349 KLFKQPVFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQ------------ 396
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ L+++ ++ GP LV+ PLST+P WQ FE W D+N + Y
Sbjct: 397 ----TVAFLSWL--IYARRQNGPHLVVVPLSTVPAWQETFEKWAPDVNCVYY 442
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GP LV+ PLST+P WQ FE W D+N + Y G
Sbjct: 412 GPHLVVVPLSTVPAWQETFEKWAPDVNCVYYLG 444
>gi|159465629|ref|XP_001691025.1| SNF2 superfamily protein [Chlamydomonas reinhardtii]
gi|158279711|gb|EDP05471.1| SNF2 superfamily protein [Chlamydomonas reinhardtii]
Length = 1061
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 131/190 (68%), Gaps = 8/190 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
+F V++T++E++I + K F+WR IIDEAHR+KN N +L +R L +R+L++GT
Sbjct: 274 RFDVVVTSYEMVIKEKNHFKRFHWRYIIIDEAHRIKNENSRLSLVVRQLKTNYRLLITGT 333
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF----GQLKTESE-VNKLQLLLKPMMLRRL 438
PLQNN++EL++LLNFL P+ FS+ E F F G + E+E V +L +L+P +LRR+
Sbjct: 334 PLQNNLHELWALLNFLLPEIFSSAEKFEEWFSLGDGSKEKEAEVVQQLHKVLRPFLLRRV 393
Query: 439 KEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRK 498
K DVE+ + PK+ET++++ ++ +QKK+Y +L+++ L+ G A L+N +M+LRK
Sbjct: 394 KSDVERGLPPKKETILKIGMSEMQKKWYAALLQKDVDALNGGADRA---KLLNVVMQLRK 450
Query: 499 CCIHPYLLNG 508
CC HPYL G
Sbjct: 451 CCNHPYLFQG 460
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 19/114 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+L+ P TLR YQ++GLNW++ + NG N ILADEMGLGKT+Q+++ L +
Sbjct: 162 RLQVQPSIITGGTLREYQMQGLNWMIHLYDNGINGILADEMGLGKTLQTISLVAYLYE-- 219
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHA 130
GI GP +VI P ST+ NW EF+ + + V +H
Sbjct: 220 ----------------YRGITGPHIVITPKSTLGNWVNEFKRFAPIIRVTKFHG 257
>gi|150866039|ref|XP_001385507.2| transcriptional regulator [Scheffersomyces stipitis CBS 6054]
gi|149387295|gb|ABN67478.2| transcriptional regulator [Scheffersomyces stipitis CBS 6054]
Length = 1414
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 134/213 (62%), Gaps = 10/213 (4%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ +R +++YE + N+K KF++L+TT+E I+ D EL F W+ +DEA
Sbjct: 434 TQARKTIRDYEFYGSNNKP---------KFNILLTTYEYILKDRNELGAFKWQFLAVDEA 484
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN + L E L+ + +R+L++GTPLQNN+ EL +L+NFL P +F + E
Sbjct: 485 HRLKNADSSLYESLKSFKVANRLLITGTPLQNNIKELAALVNFLMPGKFDIEQEIDFETP 544
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
+ E + LQ ++P +LRRLK+DVEKS+ K E ++ VEL++IQ +YY+ I+ +N+S
Sbjct: 545 DEEQELYIKDLQKKIQPFILRRLKKDVEKSLPSKTERILRVELSDIQTEYYKNIITKNYS 604
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L+ G A + +L+N M EL+K HPYL +G
Sbjct: 605 ALNAGNKGAQI-SLLNVMSELKKASNHPYLFDG 636
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 63/112 (56%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL K PV+ + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 337 KLVKQPVFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQ------------ 384
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ L+++ ++ GP +V+ PLSTIP WQ FE W+ D+N + Y
Sbjct: 385 ----TVSFLSWL--IYSRRQNGPHIVVVPLSTIPAWQETFEKWSPDVNCVYY 430
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GP +V+ PLSTIP WQ FE W+ D+N + Y G
Sbjct: 400 GPHIVVVPLSTIPAWQETFEKWSPDVNCVYYLG 432
>gi|157134600|ref|XP_001663323.1| chromodomain helicase DNA binding protein [Aedes aegypti]
gi|108870421|gb|EAT34646.1| AAEL013136-PA [Aedes aegypti]
Length = 1983
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 135/217 (62%), Gaps = 9/217 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
SR +++E+EL F R + I+ L KF+VL+T++E++ D L W ++
Sbjct: 810 SRAIIREHELSFEEGAVRGGRASKIRASTL-KFNVLLTSYEMVSFDAACLGSIEWAALVV 868
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLK+ K + L + +++LL+GTPLQNN+ ELF LLNFL +F++ F +
Sbjct: 869 DEAHRLKSNQSKFFKTLSNYSINYKLLLTGTPLQNNLEELFHLLNFLNKNKFNDLTTFQA 928
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF + E +V KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL R
Sbjct: 929 EFADINKEDQVKKLHEMLGPHMLRRLKADVLKNMPTKSEFIVRVELSQMQKKYYKYILTR 988
Query: 473 NFSFLS-KGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
NF L+ +G A +L+N MM+L+KCC HPYL
Sbjct: 989 NFEALNPRGGGGAC--SLINIMMDLKKCCNHPYLFQA 1023
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 70/126 (55%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDNTLR--AYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P KP K E P Y +D +R YQLEG+NWL +SW N + ILADEMGL
Sbjct: 698 PPDKPTTDLKRKFEVQPSYLDDTGMRLHPYQLEGINWLRYSWANDTDTILADEMGL---- 753
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ+ TF+ +++K G RGPFLV PLSTI NW+REFE W D
Sbjct: 754 ---------------GKTIQTATFLYSLYKEGHCRGPFLVAVPLSTIINWEREFETWAPD 798
Query: 123 LNVIVY 128
L I Y
Sbjct: 799 LYCITY 804
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV PLSTI NW+REFE W DL I Y G +
Sbjct: 762 FLYSLYKEGHCRGPFLVAVPLSTIINWEREFETWAPDLYCITYVGDK 808
>gi|68144413|gb|AAY86155.1| chromatin-remodelling complex ATPase ISWI2 [Chlamydomonas
reinhardtii]
Length = 1086
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 131/190 (68%), Gaps = 8/190 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
+F V++T++E++I + K F+WR IIDEAHR+KN N +L +R L +R+L++GT
Sbjct: 274 RFDVVVTSYEMVIKEKNHFKRFHWRYIIIDEAHRIKNENSRLSLVVRQLKTNYRLLITGT 333
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF----GQLKTESE-VNKLQLLLKPMMLRRL 438
PLQNN++EL++LLNFL P+ FS+ E F F G + E+E V +L +L+P +LRR+
Sbjct: 334 PLQNNLHELWALLNFLLPEIFSSAEKFEEWFSLGDGSKEKEAEVVQQLHKVLRPFLLRRV 393
Query: 439 KEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRK 498
K DVE+ + PK+ET++++ ++ +QKK+Y +L+++ L+ G A L+N +M+LRK
Sbjct: 394 KSDVERGLPPKKETILKIGMSEMQKKWYAALLQKDVDALNGGADRA---KLLNVVMQLRK 450
Query: 499 CCIHPYLLNG 508
CC HPYL G
Sbjct: 451 CCNHPYLFQG 460
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 19/114 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+L+ P TLR YQ++GLNW++ + NG N ILADEMGLGKT+Q+++ L +
Sbjct: 162 RLQVQPSIITGGTLREYQMQGLNWMIHLYDNGINGILADEMGLGKTLQTISLVAYLYE-- 219
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHA 130
GI GP +VI P ST+ NW EF+ + + V +H
Sbjct: 220 ----------------YRGITGPHIVITPKSTLGNWVNEFKRFAPIIRVTKFHG 257
>gi|194751939|ref|XP_001958281.1| GF10842 [Drosophila ananassae]
gi|190625563|gb|EDV41087.1| GF10842 [Drosophila ananassae]
Length = 1971
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 5/213 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDL----YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
SR +++E EL F + K L YKF+VL+T++E+I D L +W + ++D
Sbjct: 801 SRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVD 860
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLK+ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ +AF E
Sbjct: 861 EAHRLKSNQSKFFRILNSYAIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGE 920
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKK+Y+ IL +N
Sbjct: 921 FADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKN 980
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ L+ + + +L+N MM+L+KCC HPYL
Sbjct: 981 YEALNSKSGGGSC-SLINIMMDLKKCCNHPYLF 1012
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 68/126 (53%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP K E P + L YQ+EG+NWL +SW G + ILADEMGL
Sbjct: 689 PPEKPTTDLKKKYEGQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGL---- 744
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G RGPFLV PLST+ NW+REFE W D
Sbjct: 745 ---------------GKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPD 789
Query: 123 LNVIVY 128
I Y
Sbjct: 790 FYCITY 795
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV PLST+ NW+REFE W D I Y G +
Sbjct: 753 FLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDK 799
>gi|50306047|ref|XP_452985.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642118|emb|CAH01836.1| KLLA0C17578p [Kluyveromyces lactis]
Length = 1525
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 132/211 (62%), Gaps = 5/211 (2%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR+++Q+YE + N K K KF+VL+TT+E I+ D L W+ +DEAH
Sbjct: 473 ASRDLIQDYEFY----TNPQAKGKKHLKFNVLLTTYEYILKDRSTLGSIKWQFLAVDEAH 528
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 529 RLKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQD 588
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
+ E + L L+P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+S
Sbjct: 589 EQQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSA 648
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
L+ G +V +L+N M EL+K HPYL +
Sbjct: 649 LTSGIKGGHV-SLLNVMNELKKASNHPYLFD 678
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 21/113 (18%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL+ P + LR +QL G+NW+ F W S N ILADEM
Sbjct: 375 KLDAQPSFIKGGELRDFQLTGINWMAFLW-------------------SKNDNGILADEM 415
Query: 78 GLGKTIQSLTFVD-AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GLGKT+Q+++F+ ++ GP LV+ PLST+P WQ F+ W LN + Y
Sbjct: 416 GLGKTVQTVSFISWLIYARRQNGPHLVVVPLSTMPAWQETFDKWAPGLNCVYY 468
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GP LV+ PLST+P WQ F+ W LN + Y G
Sbjct: 438 GPHLVVVPLSTMPAWQETFDKWAPGLNCVYYMG 470
>gi|328352490|emb|CCA38889.1| chromodomain-helicase-DNA-binding protein 1 [Komagataella pastoris
CBS 7435]
Length = 1387
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 130/211 (61%), Gaps = 8/211 (3%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+++YE F + KF+VL+TT+E I+ D EL F W+ +DEAHR
Sbjct: 439 SRKMIRDYEFFLPGKSKK-------PKFNVLLTTYEYILKDRAELGQFKWQFLAVDEAHR 491
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ + E
Sbjct: 492 LKNAESSLYESLFDFKIANRLLITGTPLQNNIKELAALVNFLMPGKFTIEQEIDFETASE 551
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E+ + LQ + P +LRRLK+DVEKS+ K E ++ VEL+++Q YY+ IL +N++ L
Sbjct: 552 EQETYIKDLQSKIHPFILRRLKKDVEKSLHSKTERILRVELSDLQTHYYKNILTKNYAAL 611
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+ G A + +L+N M EL+K HPYL +G
Sbjct: 612 NAGPKEAQI-SLLNVMAELKKTSNHPYLFDG 641
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 61/112 (54%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KLE PVY + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 340 KLEVQPVYIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQ------------ 387
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ L+++ +F GP LV+ PLST+P WQ FE W +N I Y
Sbjct: 388 ----TVSFLSWL--IFARRQYGPHLVVVPLSTVPAWQETFEKWAPSVNTIYY 433
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
+F GP LV+ PLST+P WQ FE W +N I Y G
Sbjct: 396 IFARRQYGPHLVVVPLSTVPAWQETFEKWAPSVNTIYYMG 435
>gi|195496103|ref|XP_002095551.1| GE22457 [Drosophila yakuba]
gi|194181652|gb|EDW95263.1| GE22457 [Drosophila yakuba]
Length = 1982
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 5/213 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDL----YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
SR +++E EL F + K L YKF+VL+T++E+I D L +W + ++D
Sbjct: 816 SRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVD 875
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLK+ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ +AF E
Sbjct: 876 EAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGE 935
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKK+Y+ IL +N
Sbjct: 936 FADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKN 995
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ L+ + + +L+N MM+L+KCC HPYL
Sbjct: 996 YEALNSKSGGGSC-SLINIMMDLKKCCNHPYLF 1027
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 68/126 (53%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP K E P + L YQ+EG+NWL +SW G + ILADEMGL
Sbjct: 704 PPEKPTTDLKKKYEDQPGFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGL---- 759
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G RGPFLV PLST+ NW+REFE W D
Sbjct: 760 ---------------GKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPD 804
Query: 123 LNVIVY 128
I Y
Sbjct: 805 FYCITY 810
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV PLST+ NW+REFE W D I Y G +
Sbjct: 768 FLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDK 814
>gi|254567734|ref|XP_002490977.1| Nucleosome remodeling factor that functions in regulation of
transcription elongation [Komagataella pastoris GS115]
gi|238030774|emb|CAY68697.1| Nucleosome remodeling factor that functions in regulation of
transcription elongation [Komagataella pastoris GS115]
Length = 1387
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 130/211 (61%), Gaps = 8/211 (3%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+++YE F + KF+VL+TT+E I+ D EL F W+ +DEAHR
Sbjct: 439 SRKMIRDYEFFLPGKSKK-------PKFNVLLTTYEYILKDRAELGQFKWQFLAVDEAHR 491
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ + E
Sbjct: 492 LKNAESSLYESLFDFKIANRLLITGTPLQNNIKELAALVNFLMPGKFTIEQEIDFETASE 551
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E+ + LQ + P +LRRLK+DVEKS+ K E ++ VEL+++Q YY+ IL +N++ L
Sbjct: 552 EQETYIKDLQSKIHPFILRRLKKDVEKSLHSKTERILRVELSDLQTHYYKNILTKNYAAL 611
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+ G A + +L+N M EL+K HPYL +G
Sbjct: 612 NAGPKEAQI-SLLNVMAELKKTSNHPYLFDG 641
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 61/112 (54%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KLE PVY + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 340 KLEVQPVYIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQ------------ 387
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ L+++ +F GP LV+ PLST+P WQ FE W +N I Y
Sbjct: 388 ----TVSFLSWL--IFARRQYGPHLVVVPLSTVPAWQETFEKWAPSVNTIYY 433
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
+F GP LV+ PLST+P WQ FE W +N I Y G
Sbjct: 396 IFARRQYGPHLVVVPLSTVPAWQETFEKWAPSVNTIYYMG 435
>gi|442633513|ref|NP_001262078.1| Mi-2, isoform D [Drosophila melanogaster]
gi|440216038|gb|AGB94771.1| Mi-2, isoform D [Drosophila melanogaster]
Length = 1973
Score = 167 bits (424), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 5/213 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDL----YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
SR +++E EL F + K L YKF+VL+T++E+I D L +W + ++D
Sbjct: 807 SRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVD 866
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLK+ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ +AF E
Sbjct: 867 EAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGE 926
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKK+Y+ IL +N
Sbjct: 927 FADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKN 986
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ L+ + + +L+N MM+L+KCC HPYL
Sbjct: 987 YEALNSKSGGGSC-SLINIMMDLKKCCNHPYLF 1018
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 68/126 (53%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP K E P + L YQ+EG+NWL +SW G + ILADEMGL
Sbjct: 695 PPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGL---- 750
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G RGPFLV PLST+ NW+REFE W D
Sbjct: 751 ---------------GKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPD 795
Query: 123 LNVIVY 128
I Y
Sbjct: 796 FYCITY 801
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV PLST+ NW+REFE W D I Y G +
Sbjct: 759 FLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDK 805
>gi|301119013|ref|XP_002907234.1| chromatin-remodeling complex ATPase chain, putative [Phytophthora
infestans T30-4]
gi|262105746|gb|EEY63798.1| chromatin-remodeling complex ATPase chain, putative [Phytophthora
infestans T30-4]
Length = 1385
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 127/194 (65%), Gaps = 5/194 (2%)
Query: 321 DLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLL 380
D KF V +TTFE+ + + L F WR IIDEAHR+KN + + +R+L EHR+LL
Sbjct: 372 DKRKFDVCVTTFEMCLKEKTALCKFAWRYLIIDEAHRIKNESSQFSTVVRMLDTEHRLLL 431
Query: 381 SGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE-----VNKLQLLLKPMML 435
+GTPLQNN++EL++LLNFL P F++++ F F + E +++L +L+P ML
Sbjct: 432 TGTPLQNNLHELWALLNFLLPDVFASSQEFDDWFNLDVDDDEAKKQMISQLHKILRPFML 491
Query: 436 RRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMME 495
RRLK DVEKS+ PK+ET++ V ++ +QK Y+ +L R+ + + GT + L N +M+
Sbjct: 492 RRLKADVEKSLPPKKETLLFVGMSEMQKALYKSLLLRDMNTIMGGTGGVSKSALQNIVMQ 551
Query: 496 LRKCCIHPYLLNGK 509
LRKCC HPYL G+
Sbjct: 552 LRKCCGHPYLFEGQ 565
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 19/115 (16%)
Query: 17 VKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADE 76
V++ + P T+RAYQLEGL+W++ G N ILADEMGLGKT+Q
Sbjct: 256 VRITQQPSVIKFGTMRAYQLEGLSWMINLAHQGINGILADEMGLGKTLQ----------- 304
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
TI L + I GP +V+ P ST+ NW EF+ W L + +H
Sbjct: 305 -----TISVLAYFYEF--ENISGPHIVLVPKSTLSNWLAEFKRWCPSLRAVKFHG 352
>gi|302803789|ref|XP_002983647.1| hypothetical protein SELMODRAFT_155996 [Selaginella moellendorffii]
gi|300148484|gb|EFJ15143.1| hypothetical protein SELMODRAFT_155996 [Selaginella moellendorffii]
Length = 1296
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 140/219 (63%), Gaps = 10/219 (4%)
Query: 296 SASRNMLQEYELFF--------RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNW 347
+ +R++++E+E F+ + + ++D KF VL+T++E+I D LK W
Sbjct: 358 AKARSVIREFEFFYPKTDKTKKKYYSERKHSKQDRIKFDVLLTSYEMITFDAAILKSIKW 417
Query: 348 RLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNN 407
I+DE HRLK++ KL + L+ HRVLL+GTPLQNN++ELF+L++FL+ +FS+
Sbjct: 418 ECLIVDEGHRLKSKESKLFQTLQNYTTYHRVLLTGTPLQNNLDELFTLMHFLDASKFSSL 477
Query: 408 EAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYR 467
E F EF + E +V++L +L +LRR+K+DV K + PK+E ++ VEL+++QK+ Y+
Sbjct: 478 EEFQQEFRDINQEEQVSRLHKMLASHLLRRVKKDVLKQLPPKKELMLRVELSSVQKELYK 537
Query: 468 GILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
IL RN+ LSK +L N +MELRK C HPY++
Sbjct: 538 EILTRNYEALSK--RGGPQVSLNNVVMELRKLCGHPYMV 574
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 20/114 (17%)
Query: 16 WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
+ + E +P + +D L YQLEGLN+L F+W ++ ILAD
Sbjct: 260 FTQFETTPDFLSDGVLHPYQLEGLNFLRFAW-------------------QQEKHVILAD 300
Query: 76 EMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
EMGLGKTIQ++ F+ ++ + + P LV+APLST+ NW+REF W D++++VY
Sbjct: 301 EMGLGKTIQTIAFLASLKQEEVTDPHLVVAPLSTLRNWEREFATWAPDIHIVVY 354
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ ++ + + P LV+APLST+ NW+REF W D++++VY G K S
Sbjct: 313 FLASLKQEEVTDPHLVVAPLSTLRNWEREFATWAPDIHIVVYAGNAKARS 362
>gi|195428619|ref|XP_002062369.1| GK17504 [Drosophila willistoni]
gi|194158454|gb|EDW73355.1| GK17504 [Drosophila willistoni]
Length = 2023
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 5/213 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDL----YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
SR +++E EL F + K L YKF+VL+T++E+I D L +W + ++D
Sbjct: 827 SRAVIRENELSFEEGAIRGTKVSRLRTTQYKFNVLLTSYELISMDAPCLGSIDWAVLVVD 886
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLK+ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ +AF E
Sbjct: 887 EAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGE 946
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKK+Y+ IL +N
Sbjct: 947 FADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKN 1006
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ L+ + + +L+N MM+L+KCC HPYL
Sbjct: 1007 YEALNSKSGGGSC-SLINIMMDLKKCCNHPYLF 1038
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 68/126 (53%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P KP K E P + + L YQ+EG+NWL +SW G + ILADEMGL
Sbjct: 715 PPDKPTTDLKKKYEGQPAFLENTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGL---- 770
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G RGPFLV PLST+ NW+REFE W D
Sbjct: 771 ---------------GKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPD 815
Query: 123 LNVIVY 128
I Y
Sbjct: 816 FYCITY 821
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV PLST+ NW+REFE W D I Y G +
Sbjct: 779 FLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDK 825
>gi|62472261|ref|NP_001014591.1| Mi-2, isoform B [Drosophila melanogaster]
gi|61678453|gb|AAX52739.1| Mi-2, isoform B [Drosophila melanogaster]
Length = 1983
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 5/213 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDL----YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
SR +++E EL F + K L YKF+VL+T++E+I D L +W + ++D
Sbjct: 817 SRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVD 876
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLK+ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ +AF E
Sbjct: 877 EAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGE 936
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKK+Y+ IL +N
Sbjct: 937 FADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKN 996
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ L+ + + +L+N MM+L+KCC HPYL
Sbjct: 997 YEALNSKSGGGSC-SLINIMMDLKKCCNHPYLF 1028
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 68/126 (53%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP K E P + L YQ+EG+NWL +SW G + ILADEMGL
Sbjct: 705 PPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGL---- 760
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G RGPFLV PLST+ NW+REFE W D
Sbjct: 761 ---------------GKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPD 805
Query: 123 LNVIVY 128
I Y
Sbjct: 806 FYCITY 811
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV PLST+ NW+REFE W D I Y G +
Sbjct: 769 FLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDK 815
>gi|302817780|ref|XP_002990565.1| hypothetical protein SELMODRAFT_185367 [Selaginella moellendorffii]
gi|300141733|gb|EFJ08442.1| hypothetical protein SELMODRAFT_185367 [Selaginella moellendorffii]
Length = 1296
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 140/219 (63%), Gaps = 10/219 (4%)
Query: 296 SASRNMLQEYELFF--------RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNW 347
+ +R++++E+E F+ + + ++D KF VL+T++E+I D LK W
Sbjct: 358 AKARSVIREFEFFYPKTDKTKKKYYSERKHSKQDRIKFDVLLTSYEMITFDAAILKSIKW 417
Query: 348 RLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNN 407
I+DE HRLK++ KL + L+ HRVLL+GTPLQNN++ELF+L++FL+ +FS+
Sbjct: 418 ECLIVDEGHRLKSKESKLFQTLQNYTTYHRVLLTGTPLQNNLDELFTLMHFLDASKFSSL 477
Query: 408 EAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYR 467
E F EF + E +V++L +L +LRR+K+DV K + PK+E ++ VEL+++QK+ Y+
Sbjct: 478 EEFQQEFRDINQEEQVSRLHKMLASHLLRRVKKDVLKQLPPKKELMLRVELSSVQKELYK 537
Query: 468 GILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
IL RN+ LSK +L N +MELRK C HPY++
Sbjct: 538 EILTRNYEALSK--RGGPQVSLNNVVMELRKLCGHPYMV 574
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 20/114 (17%)
Query: 16 WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
+ + E +P + +D L YQLEGLN+L F+W ++ ILAD
Sbjct: 260 FTQFETTPDFLSDGVLHPYQLEGLNFLRFAW-------------------QQEKHVILAD 300
Query: 76 EMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
EMGLGKTIQ++ F+ ++ + + P LV+APLST+ NW+REF W D++++VY
Sbjct: 301 EMGLGKTIQTIAFLASLKQEEVTDPHLVVAPLSTLRNWEREFATWAPDIHIVVY 354
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ ++ + + P LV+APLST+ NW+REF W D++++VY G K S
Sbjct: 313 FLASLKQEEVTDPHLVVAPLSTLRNWEREFATWAPDIHIVVYAGNAKARS 362
>gi|24667055|ref|NP_649154.2| Mi-2, isoform A [Drosophila melanogaster]
gi|281366478|ref|NP_001163476.1| Mi-2, isoform C [Drosophila melanogaster]
gi|13124018|sp|O97159.2|CHDM_DROME RecName: Full=Chromodomain-helicase-DNA-binding protein Mi-2 homolog;
AltName: Full=ATP-dependent helicase Mi-2; Short=dMi-2
gi|23093096|gb|AAF49099.2| Mi-2, isoform A [Drosophila melanogaster]
gi|272455249|gb|ACZ94747.1| Mi-2, isoform C [Drosophila melanogaster]
Length = 1982
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 5/213 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDL----YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
SR +++E EL F + K L YKF+VL+T++E+I D L +W + ++D
Sbjct: 816 SRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVD 875
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLK+ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ +AF E
Sbjct: 876 EAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGE 935
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKK+Y+ IL +N
Sbjct: 936 FADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKN 995
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ L+ + + +L+N MM+L+KCC HPYL
Sbjct: 996 YEALNSKSGGGSC-SLINIMMDLKKCCNHPYLF 1027
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 68/126 (53%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP K E P + L YQ+EG+NWL +SW G + ILADEMGL
Sbjct: 704 PPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGL---- 759
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G RGPFLV PLST+ NW+REFE W D
Sbjct: 760 ---------------GKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPD 804
Query: 123 LNVIVY 128
I Y
Sbjct: 805 FYCITY 810
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV PLST+ NW+REFE W D I Y G +
Sbjct: 768 FLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDK 814
>gi|225436589|ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
vinifera]
Length = 1764
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 137/217 (63%), Gaps = 9/217 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR + Q+YE + + I F+ L+TT+E+++ D L W ++DEAH
Sbjct: 703 ASREVCQQYEFYTNKKTGRTIL------FNALLTTYEVVLKDKAVLSKIKWNYLMVDEAH 756
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN +L L ++++L++GTPLQN+V EL++LL+FL+P +F N + F+ +
Sbjct: 757 RLKNSEAQLYTTLSEFSAKNKLLITGTPLQNSVEELWALLHFLDPDKFKNKDDFVQNYKN 816
Query: 417 LKT--ESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + E E+ L + L+P +LRR+ +DVEKS+ PK E ++ VE++ +QK+YY+ ILERNF
Sbjct: 817 LSSFNEMELANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 876
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 877 HDLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESADH 912
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 76/130 (58%), Gaps = 20/130 (15%)
Query: 3 LIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++ +KK AS KL++ P + LR YQLEGLN+L+ SW N N ILADEMGLGK
Sbjct: 591 MVDMQRKKSKAS-LRKLDEQPGWLKGGQLRDYQLEGLNFLVNSWRNDTNVILADEMGLGK 649
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-T 121
T+QS++ +G + Q I GPFLV+ PLST+ NW +EF+ W
Sbjct: 650 TVQSVSM-------LGFLQNAQQ-----------IYGPFLVVVPLSTLSNWAKEFKKWLP 691
Query: 122 DLNVIVYHAT 131
DLNVIVY T
Sbjct: 692 DLNVIVYVGT 701
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
I GPFLV+ PLST+ NW +EF+ W DLNVIVY G R
Sbjct: 666 IYGPFLVVVPLSTLSNWAKEFKKWLPDLNVIVYVGTR 702
>gi|158300661|ref|XP_320523.4| AGAP012009-PA [Anopheles gambiae str. PEST]
gi|157013268|gb|EAA00692.4| AGAP012009-PA [Anopheles gambiae str. PEST]
Length = 2037
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 136/215 (63%), Gaps = 9/215 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
SR +++E EL F R K I+ + KF+VL+T++E+I D L +W + ++
Sbjct: 859 SRAVIRENELSFEEGAVRGGKASRIRASSI-KFNVLLTSYELISIDAACLGSIDWSVLVV 917
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLK+ K + L ++ +++LL+GTPLQNN+ ELF LLNFL +F+ F +
Sbjct: 918 DEAHRLKSNQSKFFKVLNAYNIAYKLLLTGTPLQNNLEELFHLLNFLNKSKFNELAEFQN 977
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL R
Sbjct: 978 EFADISKEEQVKRLHEMLGPHMLRRLKADVLKNMPTKSEFIVRVELSPLQKKYYKYILTR 1037
Query: 473 NFSFLS-KGTTSANVPNLMNTMMELRKCCIHPYLL 506
N+ L+ KG A +L+N MM+L+KCC HPYL
Sbjct: 1038 NYEALNPKGGGGAC--SLINIMMDLKKCCNHPYLF 1070
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 71/126 (56%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDNTLR--AYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP K E P Y ++ +R YQLEG+NWL +SW NG + ILADEMGL
Sbjct: 747 PPEKPTTDLKRKFEVQPPYLDETGMRLHPYQLEGINWLRYSWANGTDTILADEMGL---- 802
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ+ TF+ +++K G RGPFLV PLSTI NW+REFE W D
Sbjct: 803 ---------------GKTIQTATFLYSLYKEGHCRGPFLVAVPLSTIINWEREFETWAPD 847
Query: 123 LNVIVY 128
I Y
Sbjct: 848 FYCITY 853
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
F+ +++K G RGPFLV PLSTI NW+REFE W D I Y G ++
Sbjct: 811 FLYSLYKEGHCRGPFLVAVPLSTIINWEREFETWAPDFYCITYVGDKE 858
>gi|281203153|gb|EFA77354.1| chromo domain-containing protein [Polysphondylium pallidum PN500]
Length = 1842
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 137/212 (64%), Gaps = 6/212 (2%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+SASR++++++E + +F K+K F+VL+TT++ I+ D L W +DE
Sbjct: 794 SSASRDIIRQFEFY---QPTRFGKKK--ISFNVLLTTYDFILKDKNYLGAIKWEYLAVDE 848
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN L E L+ H +R+L++GTPLQN++ EL++LLNFL P +F + + F ++
Sbjct: 849 AHRLKNNESMLHEVLKYFHTSNRLLVTGTPLQNSLKELWNLLNFLMPNKFHSLDEFQDQY 908
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
LK + ++ +L +LKP +LRR+K++VEKS+ K E ++ V+L+ QKKYYR IL +NF
Sbjct: 909 ADLKEKDQIAELHNVLKPHLLRRIKKEVEKSLPAKTERILRVDLSPTQKKYYRWILSKNF 968
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
L+KG L+N + EL+K C HPYL
Sbjct: 969 HELNKGVKGEKT-TLLNIVAELKKTCNHPYLF 999
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 74/137 (54%), Gaps = 30/137 (21%)
Query: 16 WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
+VK E+ P + N LR YQ+EGLNWL+ SW N N ILADEMGL
Sbjct: 696 FVKFEEQPDWINAGKLRDYQMEGLNWLVHSWKNNTNVILADEMGL--------------- 740
Query: 76 EMGLGKTIQSLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHATFV 133
GKTIQ+++F+ +F + GPFLV+ PLSTI NW REF W +N+IVY
Sbjct: 741 ----GKTIQTISFISYLFNVQNLSGPFLVVVPLSTIENWHREFTKWAPKMNLIVY----- 791
Query: 134 VLLQTGSKFFRICLEFF 150
TGS R + F
Sbjct: 792 ----TGSSASRDIIRQF 804
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ +F + GPFLV+ PLSTI NW REF W +N+IVY G
Sbjct: 749 FISYLFNVQNLSGPFLVVVPLSTIENWHREFTKWAPKMNLIVYTG 793
>gi|4325130|gb|AAD17276.1| dMi-2 protein [Drosophila melanogaster]
Length = 1982
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 5/213 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDL----YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
SR +++E EL F + K L YKF+VL+T++E+I D L +W + ++D
Sbjct: 816 SRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVD 875
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLK+ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ +AF E
Sbjct: 876 EAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGE 935
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKK+Y+ IL +N
Sbjct: 936 FADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKN 995
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ L+ + + +L+N MM+L+KCC HPYL
Sbjct: 996 YEALNSKSGGGSC-SLINIMMDLKKCCNHPYLF 1027
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 68/126 (53%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP K E P + L YQ+EG+NWL +SW G + ILADEMGL
Sbjct: 704 PPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGL---- 759
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G RGPFLV PLST+ NW+REFE W D
Sbjct: 760 ---------------GKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPD 804
Query: 123 LNVIVY 128
I Y
Sbjct: 805 FYCITY 810
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV PLST+ NW+REFE W D I Y G +
Sbjct: 768 FLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDK 814
>gi|195379440|ref|XP_002048487.1| GJ13998 [Drosophila virilis]
gi|194155645|gb|EDW70829.1| GJ13998 [Drosophila virilis]
Length = 2012
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 5/213 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDL----YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
SR +++E EL F + K L YKF+VL+T++E+I D L +W + ++D
Sbjct: 814 SRAVIRENELTFDEGAIRGTKVSRLRTTQYKFNVLLTSYELISMDAPCLGSIDWAVLVVD 873
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLK+ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ +AF E
Sbjct: 874 EAHRLKSNQSKFFRILNSYAIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGE 933
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKK+Y+ IL +N
Sbjct: 934 FADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKN 993
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ L+ + + +L+N MM+L+KCC HPYL
Sbjct: 994 YEALNSKSGGGSC-SLINIMMDLKKCCNHPYLF 1025
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 69/126 (54%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP K E P + +D L YQ+EG+NWL +SW + ILADEMGL
Sbjct: 702 PPEKPTTDLKKKYEGQPAFLDDTGMQLHPYQIEGINWLRYSWGQSIDTILADEMGL---- 757
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G RGPFLV PLST+ NW+REFE W D
Sbjct: 758 ---------------GKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPD 802
Query: 123 LNVIVY 128
I Y
Sbjct: 803 FYCITY 808
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV PLST+ NW+REFE W D I Y G +
Sbjct: 766 FLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDK 812
>gi|403352806|gb|EJY75922.1| Type III restriction enzyme, res subunit family protein [Oxytricha
trifallax]
Length = 2584
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 142/218 (65%), Gaps = 4/218 (1%)
Query: 295 ASASRNMLQEYELFFRND--KNQFIKEKDLYKFHVLITTFEIIISDCLEL-KDFNWRLCI 351
++ R+ L+ +E F+ + K Q ++ +L+KF+++IT+FE+ + D + ++ + +
Sbjct: 1206 SAEGRSELRYWEWFYTDITYKGQITQKSELFKFNIIITSFEVFMQDLNPIIQEIPFMYIV 1265
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN+ K L+ L+ + +LL+GTP+QNN EL++LLN++EP++F + + FM
Sbjct: 1266 VDEAHRLKNKQAKTLKLLKDHPCKRILLLTGTPVQNNTKELWTLLNYIEPEKFHSQDDFM 1325
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
+G L+ ++ KL ++KP LRRLKE+V+ SI P +ETV+EV LT +Q YY+GI
Sbjct: 1326 ESYGNLENYEQIQKLHQMIKPHFLRRLKEEVDNSIPPLQETVIEVGLTTVQNTYYKGIYG 1385
Query: 472 RNFSFLSK-GTTSANVPNLMNTMMELRKCCIHPYLLNG 508
N L+K GT S L N ++LRKCC H +LL G
Sbjct: 1386 ENRMMLAKFGTNSIKTSQLNNIDVQLRKCCNHLFLLKG 1423
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 21/129 (16%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
L+ YQ+ GLNWL+ +W + RN +LADEMGLGKTI +L +
Sbjct: 1122 LKDYQITGLNWLIRAWHSHRNIVLADEMGLGKTIMTLAL----------------FEHFN 1165
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVVLLQTGSKFFRICLEFF 150
V++ ++GP+L++APL+T+ +W+R E WT LN I+Y+ G R F+
Sbjct: 1166 RVYR--LKGPYLILAPLTTLEHWKRIAEEWTTLNSILYYDPGSA---EGRSELRYWEWFY 1220
Query: 151 VDAVFKTGI 159
D +K I
Sbjct: 1221 TDITYKGQI 1229
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 27/33 (81%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 191
++GP+L++APL+T+ +W+R E WT LN I+Y+
Sbjct: 1170 LKGPYLILAPLTTLEHWKRIAEEWTTLNSILYY 1202
>gi|195354288|ref|XP_002043630.1| GM15785 [Drosophila sechellia]
gi|194127798|gb|EDW49841.1| GM15785 [Drosophila sechellia]
Length = 1921
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 5/213 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDL----YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
SR +++E EL F + K L YKF+VL+T++E+I D L +W + ++D
Sbjct: 755 SRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVD 814
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLK+ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ +AF E
Sbjct: 815 EAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGE 874
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKK+Y+ IL +N
Sbjct: 875 FADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKN 934
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ L+ + + +L+N MM+L+KCC HPYL
Sbjct: 935 YEALNSKSGGGSC-SLINIMMDLKKCCNHPYLF 966
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 85 SLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
++T + +++K G RGPFLV PLST+ NW+REFE W D I Y
Sbjct: 704 TVTLLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITY 749
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 153 AVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
+++K G RGPFLV PLST+ NW+REFE W D I Y G +
Sbjct: 710 SLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDK 753
>gi|296083825|emb|CBI24213.3| unnamed protein product [Vitis vinifera]
Length = 1539
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 137/217 (63%), Gaps = 9/217 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR + Q+YE + + I F+ L+TT+E+++ D L W ++DEAH
Sbjct: 506 ASREVCQQYEFYTNKKTGRTIL------FNALLTTYEVVLKDKAVLSKIKWNYLMVDEAH 559
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN +L L ++++L++GTPLQN+V EL++LL+FL+P +F N + F+ +
Sbjct: 560 RLKNSEAQLYTTLSEFSAKNKLLITGTPLQNSVEELWALLHFLDPDKFKNKDDFVQNYKN 619
Query: 417 LKT--ESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + E E+ L + L+P +LRR+ +DVEKS+ PK E ++ VE++ +QK+YY+ ILERNF
Sbjct: 620 LSSFNEMELANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 679
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 680 HDLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESADH 715
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 76/130 (58%), Gaps = 20/130 (15%)
Query: 3 LIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++ +KK AS KL++ P + LR YQLEGLN+L+ SW N N ILADEMGLGK
Sbjct: 394 MVDMQRKKSKAS-LRKLDEQPGWLKGGQLRDYQLEGLNFLVNSWRNDTNVILADEMGLGK 452
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-T 121
T+QS++ +G + Q I GPFLV+ PLST+ NW +EF+ W
Sbjct: 453 TVQSVSM-------LGFLQNAQQ-----------IYGPFLVVVPLSTLSNWAKEFKKWLP 494
Query: 122 DLNVIVYHAT 131
DLNVIVY T
Sbjct: 495 DLNVIVYVGT 504
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
I GPFLV+ PLST+ NW +EF+ W DLNVIVY G R
Sbjct: 469 IYGPFLVVVPLSTLSNWAKEFKKWLPDLNVIVYVGTR 505
>gi|328772764|gb|EGF82802.1| hypothetical protein BATDEDRAFT_9456, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 1238
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 129/213 (60%), Gaps = 5/213 (2%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ASR ++ YE F + KE + +F+VL+TTFE+I+ D L W +DEA
Sbjct: 256 TASRQTIRNYEFFIPSK----TKEPRI-RFNVLLTTFELILKDKEHLGKIKWAFLAVDEA 310
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN +L E L+ +R+L++GTPLQN V EL +L+ FL P Q + F G
Sbjct: 311 HRLKNSESQLHEALKDFSTANRLLITGTPLQNTVKELLALIQFLMPDQLQEFQDFEITVG 370
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
+ + ++ +LQ+ LK +MLRRLK+DVEKS+ K E ++ VEL+ +Q +YY+ + +NF
Sbjct: 371 DEEQQEKIRELQIKLKDLMLRRLKKDVEKSLPSKSERILRVELSPLQLEYYKAVFTKNFE 430
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L++GT +L N MEL+K HPYL +G
Sbjct: 431 TLNRGTAGGKQVSLQNIAMELKKASNHPYLFDG 463
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 76/145 (52%), Gaps = 27/145 (18%)
Query: 14 SDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+D+ +K P Y LR YQL G+NW+ W RN ILADEMGL
Sbjct: 155 TDYKPFQKQPSYLVGGELRDYQLLGVNWMAHLWHRNRNGILADEMGL------------- 201
Query: 74 ADEMGLGKTIQSLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
GKTIQS++F+ +F + + GPFLV+ PLSTI WQ+EF+ W D+NVI YH
Sbjct: 202 ------GKTIQSISFLSYLFHSQHVYGPFLVVVPLSTIGAWQKEFKQWAPDINVICYHG- 254
Query: 132 FVVLLQTGSKFFRICLEFFVDAVFK 156
T S+ EFF+ + K
Sbjct: 255 -----DTASRQTIRNYEFFIPSKTK 274
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
+ GPFLV+ PLSTI WQ+EF+ W D+NVI YHG
Sbjct: 220 VYGPFLVVVPLSTIGAWQKEFKQWAPDINVICYHG 254
>gi|301606634|ref|XP_002932929.1| PREDICTED: chromodomain-helicase-DNA-binding protein 6-like
[Xenopus (Silurana) tropicalis]
Length = 2522
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/129 (59%), Positives = 100/129 (77%), Gaps = 2/129 (1%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+ +YE+++R+++ I +YKF ++ITTFE+I++DC ELK W IIDEAHR
Sbjct: 539 SRQMIHQYEMYYRDEQGTPIP--GIYKFQIVITTFEMILADCPELKKIRWSCVIIDEAHR 596
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V EL+SLLNFLEP QF + F+ EFG L
Sbjct: 597 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELYSLLNFLEPVQFPSESTFLEEFGDL 656
Query: 418 KTESEVNKL 426
KTE +V K
Sbjct: 657 KTEEQVRKF 665
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 86/127 (67%), Gaps = 19/127 (14%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQS 66
P ++P + W KL S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 431 PMERPASETWQKLVSSRTYKNNNQLREYQLEGMNWLLFNWYN------------------ 472
Query: 67 LTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVI 126
+NCILADEMGLGKTIQS+TF+ +F GIRGPFL+IAPLSTI NW+REF WT++N I
Sbjct: 473 -RKNCILADEMGLGKTIQSITFLSEIFFMGIRGPFLIIAPLSTITNWEREFRTWTEMNTI 531
Query: 127 VYHATFV 133
VYH + +
Sbjct: 532 VYHGSQI 538
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GIRGPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ + + Y
Sbjct: 493 FLSEIFFMGIRGPFLIIAPLSTITNWEREFRTWTEMNTIVYHG--SQISRQMIHQYEMYY 550
Query: 210 VAADYVPKDG 219
P G
Sbjct: 551 RDEQGTPIPG 560
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L F+ E+ +E + R L
Sbjct: 945 RAECFRVEKNLLIFGWGRWKDILNLGRFKWHLNEKDMEMICRAL 988
>gi|396460744|ref|XP_003834984.1| similar to chromatin remodelling complex ATPase chain ISW1
[Leptosphaeria maculans JN3]
gi|312211534|emb|CBX91619.1| similar to chromatin remodelling complex ATPase chain ISW1
[Leptosphaeria maculans JN3]
Length = 1189
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 136/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++D+ + IK++ + KF V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 351 KDDRAELIKDRLVDEKFDVCITSYEMILREKTHLKKFAWEYIIIDEAHRIKNEESSLAQM 410
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ + R+L++GTPLQNN++EL++LLNFL P F ++ AF F Q +S+ V +L
Sbjct: 411 VRVFNSRSRLLITGTPLQNNLHELWALLNFLLPDVFGDSAAFDDWFSQQNADSDAVVQQL 470
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSAN 485
+L+P +LRR+K DVEKS+ PK+E + V ++++Q ++Y+ ILE++ ++ G T +
Sbjct: 471 HKVLRPFLLRRVKADVEKSLLPKKEINLYVGMSDMQVQWYKKILEKDIDAVNGGAGTKES 530
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 531 KTRLLNIVMQLRKCCNHPYLFEG 553
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 61/108 (56%), Gaps = 19/108 (17%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + T+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 257 ESPGFIKGGTMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQ--------------- 301
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIV 127
TI L ++ F GI GP LV P ST+ NW+REF W ++NV+V
Sbjct: 302 -TISFLGYL--RFIAGITGPHLVAVPKSTLDNWKREFGKWCPEINVLV 346
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRKKLSRRDKERL 205
F GI GP LV P ST+ NW+REF W ++NV+V G + + K+RL
Sbjct: 311 FIAGITGPHLVAVPKSTLDNWKREFGKWCPEINVLVLQGNKDDRAELIKDRL 362
>gi|170036699|ref|XP_001846200.1| chromodomain helicase-DNA-binding protein 3 [Culex quinquefasciatus]
gi|167879513|gb|EDS42896.1| chromodomain helicase-DNA-binding protein 3 [Culex quinquefasciatus]
Length = 1982
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 138/217 (63%), Gaps = 9/217 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCII 352
SR +++E+EL F R + I+ + KF+VL+T++E++ D L +W + ++
Sbjct: 837 SRAIIREHELSFEEGAVRGGRASKIRANTI-KFNVLLTSYEMVSLDAACLGSIDWSVLVV 895
Query: 353 DEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS 412
DEAHRLK+ K + L ++ +++LL+GTPLQNN+ ELF LLNFL +F++ F +
Sbjct: 896 DEAHRLKSNQSKFFKVLANYNIAYKLLLTGTPLQNNLEELFHLLNFLNKNKFNDLGVFQN 955
Query: 413 EFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILER 472
EF + E +V KL +L P MLRRLK DV K++ K E +V V+L+ +QKKYY+ IL R
Sbjct: 956 EFADINKEDQVKKLHEMLGPHMLRRLKADVLKNMPTKSEFIVRVDLSPMQKKYYKYILTR 1015
Query: 473 NFSFLS-KGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
NF L+ KG A +L+N MM+L+KCC HPYL
Sbjct: 1016 NFEALNPKGGGGAC--SLINIMMDLKKCCNHPYLFQA 1050
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 70/126 (55%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDNTLR--AYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP K E P Y +D +R YQLEG+NWL +SW N + ILADEMGL
Sbjct: 725 PPEKPTTDLRRKYEVQPTYLDDTGMRLHPYQLEGINWLRYSWSNETDTILADEMGL---- 780
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ+ TF+ +++K G +GPFLV PLSTI NW+REFE W D
Sbjct: 781 ---------------GKTIQTATFLYSLYKEGHCKGPFLVAVPLSTIINWEREFETWAPD 825
Query: 123 LNVIVY 128
I Y
Sbjct: 826 FYCITY 831
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV PLSTI NW+REFE W D I Y G +
Sbjct: 789 FLYSLYKEGHCKGPFLVAVPLSTIINWEREFETWAPDFYCITYVGDK 835
>gi|242094948|ref|XP_002437964.1| hypothetical protein SORBIDRAFT_10g005630 [Sorghum bicolor]
gi|241916187|gb|EER89331.1| hypothetical protein SORBIDRAFT_10g005630 [Sorghum bicolor]
Length = 1147
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 145/227 (63%), Gaps = 19/227 (8%)
Query: 295 ASASRNMLQEYELFF-----------RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELK 343
A+ASR++++++E ++ ++ + K++ +F VL+T++E+I D LK
Sbjct: 184 AAASRDIIRKHEFYYPKEKLKKLKKKKSSPSNEEKKQSRIRFDVLLTSYEMINMDSNVLK 243
Query: 344 DFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQ 403
+ W I+DE HRLKN++ KL L+ + +HRVLL+GTP+QNN++ELF L++FLE +
Sbjct: 244 NIEWECLIVDEGHRLKNKDSKLFGQLKDYNTKHRVLLTGTPVQNNLDELFMLMHFLEGES 303
Query: 404 FSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQK 463
F + EF + + ++ KL +LKP +LRR K+DV K + PK+E ++ VELT+ QK
Sbjct: 304 FGSITDLQEEFKDINQDKQIEKLHGMLKPHLLRRFKKDVMKELPPKKELILRVELTSKQK 363
Query: 464 KYYRGILERNFSFLSK---GTTSANVPNLMNTMMELRKCCIHPYLLN 507
+YY+ IL +N+ L++ G TS L+N +MELRK C H ++++
Sbjct: 364 EYYKAILTKNYEVLARRNGGHTS-----LINVVMELRKLCCHGFMID 405
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 68/112 (60%), Gaps = 21/112 (18%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+ ++SP + + TL YQLEGLN+L +SWF+ + IL DEMGLG
Sbjct: 90 QFKESPTFLSCGTLHPYQLEGLNFLRYSWFHNKRVILGDEMGLG---------------- 133
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
KTIQS+ F+ ++F+ GP LV+APLST+ NW+REF W +NV++Y
Sbjct: 134 ---KTIQSIAFLASLFEDKF-GPHLVVAPLSTLRNWEREFATWAPQMNVVMY 181
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GP LV+APLST+ NW+REF W +NV++Y G
Sbjct: 151 GPHLVVAPLSTLRNWEREFATWAPQMNVVMYFG 183
>gi|145349184|ref|XP_001419020.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579250|gb|ABO97313.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 956
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 128/189 (67%), Gaps = 8/189 (4%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V +T++E++I + LK F+WR IIDEAHRLKN N +L LR +R+L++GTP
Sbjct: 192 FDVCVTSYEMVIKEKTALKKFHWRYIIIDEAHRLKNENSRLSIVLRTFSANNRMLITGTP 251
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMS-----EFGQLKTESEVNKLQLLLKPMMLRRLK 439
LQNN++EL++LLNFL P+ F N F E G+ + + V++L +L+P +LRRLK
Sbjct: 252 LQNNLHELWALLNFLLPEVFGNAGQFDEWFANVEDGEGGSGAVVSQLHKVLRPFLLRRLK 311
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
+VE S+ PK+ET++++ +T +QK +Y+ IL+++ ++ G A+ L+N +M+LRKC
Sbjct: 312 TEVETSLPPKKETILKIGMTEMQKTFYKRILQKDIDIVNSG---ADRSRLLNIVMQLRKC 368
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 369 CNHPYLFQG 377
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 18/104 (17%)
Query: 17 VKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADE 76
V+L P +R YQ+ GLNW++ + +G N ILADEMGLGKT+Q+++ LA+
Sbjct: 78 VRLTSQPTCIKFGKMREYQIAGLNWMIRLFDHGINGILADEMGLGKTLQTISLLGYLAE- 136
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW 120
G+ GP +V+ P ST+ NW EF+ W
Sbjct: 137 -----------------YRGVTGPHMVVVPKSTLGNWMNEFKRW 163
>gi|4733988|gb|AAD28668.1| putative chromodomain-helicase-DNA-binding protein [Arabidopsis
thaliana]
Length = 1738
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 132/204 (64%), Gaps = 3/204 (1%)
Query: 310 RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGL 369
RN N K KF+ L+TT+E+++ D L W ++DEAHRLKN +L L
Sbjct: 731 RNKTNDVHKVGRPIKFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTAL 790
Query: 370 RLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKT--ESEVNKLQ 427
++++L++GTPLQN+V EL++LL+FL+P +F N + F+ + L + ESE+ L
Sbjct: 791 LEFSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEFVENYKNLSSFNESELANLH 850
Query: 428 LLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVP 487
L L+P +LRR+ +DVEKS+ PK E ++ VE++ +QK+YY+ ILERNF L+KG V
Sbjct: 851 LELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQV- 909
Query: 488 NLMNTMMELRKCCIHPYLLNGKTY 511
+L+N ++EL+KCC HP+L +
Sbjct: 910 SLLNIVVELKKCCNHPFLFESADH 933
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 68/115 (59%), Gaps = 19/115 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL++ P + TLR YQLEGLN+L+ SW N N ILADEMGLGKT+QS++ +
Sbjct: 628 KLDEQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSM-------L 680
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHAT 131
G + Q I GPFLV+ PLST+ NW +EF W +N+IVY T
Sbjct: 681 GFLQNTQQ-----------IPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGT 724
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRKKLSRRDK 202
I GPFLV+ PLST+ NW +EF W +N+IVY G R R+K
Sbjct: 689 IPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVRNK 733
>gi|255731139|ref|XP_002550494.1| chromo domain protein 1 [Candida tropicalis MYA-3404]
gi|240132451|gb|EER32009.1| chromo domain protein 1 [Candida tropicalis MYA-3404]
Length = 1423
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 135/213 (63%), Gaps = 14/213 (6%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+R +++YE + +N+K KF++L+TT+E I+ D EL F W+ +DEAHR
Sbjct: 445 ARKNIRDYEFYNQNNKP---------KFNILLTTYEYILKDKTELGSFKWQFLAVDEAHR 495
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L+ + +R+L++GTPLQNNV EL +L NFL P +F+ ++ +F +
Sbjct: 496 LKNAESSLYEALKSFKVSNRLLITGTPLQNNVKELAALCNFLMPGKFNIDQEI--DFDSI 553
Query: 418 KTESE--VNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
E E + LQ + P +LRRLK+DVEKS+ K E ++ VEL++IQ +YY+ I+ +N++
Sbjct: 554 DKEQEQYIKDLQKKINPFILRRLKKDVEKSLPSKSERILRVELSDIQTEYYKNIITKNYA 613
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L+ G + + +L+N M EL+K HPYL +G
Sbjct: 614 ALNAGNKGSQI-SLLNVMSELKKASNHPYLFDG 645
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 62/112 (55%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL K PV+ + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 346 KLFKQPVFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQ------------ 393
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ L+++ ++ GP LV+ PLST+P WQ FE W D+N I Y
Sbjct: 394 ----TVAFLSWL--IYARRQNGPHLVVVPLSTVPAWQETFEKWAPDVNCIYY 439
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GP LV+ PLST+P WQ FE W D+N I Y G
Sbjct: 409 GPHLVVVPLSTVPAWQETFEKWAPDVNCIYYLG 441
>gi|403216742|emb|CCK71238.1| hypothetical protein KNAG_0G01800 [Kazachstania naganishii CBS
8797]
Length = 1476
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 131/210 (62%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ML++YE + N K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 466 SRDMLRDYEFY----TNPQAKGKKNVKFNVLMTTYEYILKDRDELSKIKWQFLAVDEAHR 521
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 522 LKNAESSLYESLNSFKVTNRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDD 581
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
K E + L L+P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+ L
Sbjct: 582 KQEEYIRDLHQRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYKAL 641
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ G+ + +L+N M EL+K HPYL +
Sbjct: 642 TAGSKGGHF-SLLNVMSELKKASNHPYLFD 670
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + LR +QL G+NW+ F W N ILADEMGLGKT+Q
Sbjct: 367 KLNTQPPFVKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQ------------ 414
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ ++ GP L++ PLST+P WQ F W DLN + Y
Sbjct: 415 ----TVAFISWL--IYSRRQNGPHLIVVPLSTMPAWQETFTKWAPDLNCLCY 460
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
GP L++ PLST+P WQ F W DLN + Y G +K
Sbjct: 430 GPHLIVVPLSTMPAWQETFTKWAPDLNCLCYMGNQK 465
>gi|256052547|ref|XP_002569826.1| chromodomain helicase DNA binding protein [Schistosoma mansoni]
gi|353229870|emb|CCD76041.1| putative chromodomain helicase DNA binding protein [Schistosoma
mansoni]
Length = 1966
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 134/215 (62%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E+E F K ++ +FHVL+T++E+I D L +W + +
Sbjct: 880 SRTVIREHEFSFDEGAVRGGAKAMKMRTGTSVRFHVLLTSYELISIDQALLGSIDWEVLV 939
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L + +++LL+GTPLQNN+ ELF LL+F+ P++F++ + F+
Sbjct: 940 VDEAHRLKNNQSKFFRILTTYKIGYKLLLTGTPLQNNLEELFHLLHFMTPEKFNDMQGFL 999
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E +V KL +L +LRRLK DV + + K E +V VEL+ +QK+YY+ IL
Sbjct: 1000 DEFADISKEEQVKKLHDMLGQHLLRRLKADVLQDMPSKGEFIVRVELSPMQKRYYKFILT 1059
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF LS + + V +L+N MM+L+KCC HP+L
Sbjct: 1060 RNFEALSCRSGGSQV-SLINIMMDLKKCCNHPFLF 1093
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 73/129 (56%), Gaps = 27/129 (20%)
Query: 8 KKKPPASDWVKLEKS----PVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLG 61
+K PP L+K P + + D L YQLEG+NWL FS+ N + ILADEMGL
Sbjct: 765 RKLPPDKCLTDLKKQYTSQPSFLDETDGQLHEYQLEGVNWLRFSFGNKIDTILADEMGL- 823
Query: 62 KTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW 120
GKTIQ++ F+ +++K G RGPFLV APLSTI NW+REFE W
Sbjct: 824 ------------------GKTIQTIAFLYSLYKEGHCRGPFLVAAPLSTIINWEREFEFW 865
Query: 121 T-DLNVIVY 128
DL V+ Y
Sbjct: 866 APDLYVVSY 874
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV APLSTI NW+REFE W DL V+ Y G +
Sbjct: 832 FLYSLYKEGHCRGPFLVAAPLSTIINWEREFEFWAPDLYVVSYIGDK 878
>gi|320582108|gb|EFW96326.1| chromatin remodelling complex ATPase chain ISW1 [Ogataea
parapolymorpha DL-1]
Length = 1033
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 136/205 (66%), Gaps = 6/205 (2%)
Query: 310 RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ +N+ IK+ + KF V+I+++EI+I + LK F W ++DEAHRLKN + L +
Sbjct: 228 QQQRNEIIKDGLMTCKFDVVISSYEIVIREKTALKKFAWEYIVVDEAHRLKNEDSLLSQI 287
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF----GQLKTESEVN 424
+R H +R+L++GTPLQNN++EL++LLNFL P F+++E F F + K E+ VN
Sbjct: 288 IRTFHSRNRLLITGTPLQNNLHELWALLNFLLPDVFADSETFDDWFSSGDSENKDETIVN 347
Query: 425 KLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TS 483
+L +L+P +LRR+K DVEK++ PK+E V V +T +QKK+Y+ +LER+ ++
Sbjct: 348 QLHKVLQPFLLRRIKSDVEKNLLPKKELNVYVGMTEMQKKWYQKLLERDIDAVNGANGKR 407
Query: 484 ANVPNLMNTMMELRKCCIHPYLLNG 508
+ L+N +M+LRKCC HPYL G
Sbjct: 408 ESKTRLLNIVMQLRKCCNHPYLFEG 432
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 60/108 (55%), Gaps = 19/108 (17%)
Query: 14 SDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
SD + +SP Y N LR YQ++GLNWL+ N + ILADEMGLGKT+Q
Sbjct: 128 SDNFEFTESPSYIN-GKLRPYQIQGLNWLISLNQNNLSGILADEMGLGKTLQ-------- 178
Query: 74 ADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT 121
TI L ++ + GI GP LVI P ST+ NWQREF WT
Sbjct: 179 --------TIAFLGYLRYI--KGIAGPHLVIVPKSTLENWQREFTKWT 216
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
GI GP LVI P ST+ NWQREF WT ++ +V G +++
Sbjct: 191 GIAGPHLVIVPKSTLENWQREFTKWTPEVETLVLTGDQQQ 230
>gi|391331672|ref|XP_003740267.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein Mi-2 homolog [Metaseiulus occidentalis]
Length = 1925
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 133/215 (61%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F R+ F +KD KFH L+T++E+I D L +W + +
Sbjct: 778 SRAVIRENEFSFEDKAVRSSNKVFKMKKDAPIKFHCLLTSYELISMDQALLGSIDWHVLV 837
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLK+ K + L + +++LL+GTPLQNN+ ELF L+NFL P F++ + F+
Sbjct: 838 VDEAHRLKSNQSKFFKVLSQYPIRYKLLLTGTPLQNNLEELFHLMNFLSPANFNDLQGFL 897
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
+EF + E +V KL LL +LRRLK DV + K E +V VEL+ IQKKYY+ IL
Sbjct: 898 NEFADIAKEEQVKKLHDLLGCHLLRRLKADVLTGMPSKSEFIVRVELSPIQKKYYKWILT 957
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RN+ LS +V +L+N MM+L+KCC HP+L
Sbjct: 958 RNYDALSIKGGGQSV-SLLNIMMDLKKCCNHPFLF 991
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 73/126 (57%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP K + P Y +N N L YQLEG+NWL FSW + ILADEMGL
Sbjct: 666 PFEKPSVDPKKKYDGQPPYVVENGNQLHPYQLEGINWLRFSWSQRTDTILADEMGL---- 721
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTGI-RGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G+ RGPFLV PLST+ NW+REFE W +
Sbjct: 722 ---------------GKTIQTITFLYSLYKEGLSRGPFLVAVPLSTLINWEREFELWAPE 766
Query: 123 LNVIVY 128
+ V+ Y
Sbjct: 767 MYVVTY 772
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTGI-RGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G+ RGPFLV PLST+ NW+REFE W ++ V+ Y G +
Sbjct: 730 FLYSLYKEGLSRGPFLVAVPLSTLINWEREFELWAPEMYVVTYVGDK 776
>gi|2213862|gb|AAC47719.1| PfSNF2L [Plasmodium falciparum]
Length = 1422
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 121/191 (63%), Gaps = 9/191 (4%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F VL+TT+EI+I D L D +W +IDEAHR+KN L +R L E+R+L++GTP
Sbjct: 418 FDVLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTP 477
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNK-------LQLLLKPMMLRR 437
L NN+ EL+SLLNFL P+ F N+E F + F K + NK L +LKP MLRR
Sbjct: 478 LHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSEIITQLHTILKPFMLRR 537
Query: 438 LKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELR 497
LK +VE+S+ PK E + V ++ +QKK Y IL +N L+ T S N ++N +M+LR
Sbjct: 538 LKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNAMTGSKN--QMLNILMQLR 595
Query: 498 KCCIHPYLLNG 508
KCC HPYL +G
Sbjct: 596 KCCNHPYLFDG 606
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 34/125 (27%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
T++ YQLEGLNWL + N ILADEMGLGKT+Q+++ C L
Sbjct: 318 TMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLCYLR--------------- 362
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAW----------------TDLNVIVYHATFV 133
F I+ ++I P ST+ NW E + W +LN + H+ F
Sbjct: 363 ---FNKNIKKKSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNRNLLHSDFD 419
Query: 134 VLLQT 138
VLL T
Sbjct: 420 VLLTT 424
>gi|412991118|emb|CCO15963.1| SNF2 super family [Bathycoccus prasinos]
Length = 970
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 129/189 (68%), Gaps = 8/189 (4%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V +T++E++I + LK F+WR +IDEAHRLKN +L LR+L +R+L++GTP
Sbjct: 216 FDVCVTSYEMVIKEKSALKKFHWRYIVIDEAHRLKNEKSRLAVTLRMLSCNNRMLITGTP 275
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE-----VNKLQLLLKPMMLRRLK 439
LQNN++EL++LLNFL P+ F+ F F ++ E V +L +L+P +LRRLK
Sbjct: 276 LQNNLHELWALLNFLLPEVFAVAGDFDDFFANVEDEDGGSVDVVQQLHKVLRPFLLRRLK 335
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
+VEKS+ PK+ET++++ ++++QK+ Y+ IL+++ ++ G+ A L+N +M+LRKC
Sbjct: 336 AEVEKSLPPKKETILKIGMSDLQKQIYKRILQKDIDVVNSGSDRA---RLLNMVMQLRKC 392
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 393 CNHPYLFEG 401
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 19/102 (18%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
T+R YQ+EGLNW++ + G N ILADEMGLGKT+Q TI L ++
Sbjct: 115 TMRQYQIEGLNWMIKLFDQGINGILADEMGLGKTLQ----------------TISLLGYL 158
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHA 130
GI GP LV+ P ST+ NW EF+ W L V +H
Sbjct: 159 HEY--RGITGPHLVVVPKSTLGNWMNEFKRWCPVLRVFKFHG 198
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHGRRKKLSRRDKERLR 206
GI GP LV+ P ST+ NW EF+ W L V +HG ++ + ++ +R
Sbjct: 163 GITGPHLVVVPKSTLGNWMNEFKRWCPVLRVFKFHGNQEAREEQKRDSMR 212
>gi|365760981|gb|EHN02659.1| Chd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1468
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 131/210 (62%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++EYE + N K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 462 SRDTIREYEFY----TNPQAKGKKTMKFNVLLTTYEYILKDRAELGGIKWQFMAVDEAHR 517
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 518 LKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDA 577
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E ++ L ++P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+S L
Sbjct: 578 EQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSAL 637
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ G + +L+N M EL+K HPYL +
Sbjct: 638 TAGAKGGHF-SLLNIMNELKKASNHPYLFD 666
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + LR +QL G+NW+ F W G N ILADEMGLGKT+Q
Sbjct: 363 KLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQ------------ 410
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ +F GP +++ PLST+P W FE W+ DLN I Y
Sbjct: 411 ----TVAFISWL--IFARRQNGPHIIVVPLSTMPAWLDTFEKWSPDLNCICY 456
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
+F GP +++ PLST+P W FE W+ DLN I Y G +K
Sbjct: 419 IFARRQNGPHIIVVPLSTMPAWLDTFEKWSPDLNCICYMGNQK 461
>gi|124803472|ref|XP_001347729.1| PfSNF2L [Plasmodium falciparum 3D7]
gi|23495979|gb|AAN35642.1|AE014836_39 PfSNF2L [Plasmodium falciparum 3D7]
Length = 1426
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 121/191 (63%), Gaps = 9/191 (4%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F VL+TT+EI+I D L D +W +IDEAHR+KN L +R L E+R+L++GTP
Sbjct: 421 FDVLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTP 480
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNK-------LQLLLKPMMLRR 437
L NN+ EL+SLLNFL P+ F N+E F + F K + NK L +LKP MLRR
Sbjct: 481 LHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSEIITQLHTILKPFMLRR 540
Query: 438 LKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELR 497
LK +VE+S+ PK E + V ++ +QKK Y IL +N L+ T S N ++N +M+LR
Sbjct: 541 LKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVLNAMTGSKN--QMLNILMQLR 598
Query: 498 KCCIHPYLLNG 508
KCC HPYL +G
Sbjct: 599 KCCNHPYLFDG 609
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 34/125 (27%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
T++ YQLEGLNWL + N ILADEMGLGKT+Q+++ C L
Sbjct: 321 TMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLCYLR--------------- 365
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAW----------------TDLNVIVYHATFV 133
F I+ ++I P ST+ NW E + W +LN + H+ F
Sbjct: 366 ---FNKNIKKKSIIICPRSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNRNLLHSDFD 422
Query: 134 VLLQT 138
VLL T
Sbjct: 423 VLLTT 427
>gi|440571986|gb|AGC12539.1| GH21519p1 [Drosophila melanogaster]
Length = 1084
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 5/213 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDL----YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
SR +++E EL F + K L YKF+VL+T++E+I D L +W + ++D
Sbjct: 817 SRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVD 876
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLK+ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ +AF E
Sbjct: 877 EAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGE 936
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKK+Y+ IL +N
Sbjct: 937 FADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKN 996
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ L+ + + +L+N MM+L+KCC HPYL
Sbjct: 997 YEALNSKSGGGSC-SLINIMMDLKKCCNHPYLF 1028
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 69/126 (54%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP K E P + L YQ+EG+NWL +SW G + ILADEMGL
Sbjct: 705 PPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGL---- 760
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G RGPFLV PLST+ NW+REFE W+ D
Sbjct: 761 ---------------GKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWSPD 805
Query: 123 LNVIVY 128
I Y
Sbjct: 806 FYCITY 811
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV PLST+ NW+REFE W+ D I Y G +
Sbjct: 769 FLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWSPDFYCITYIGDK 815
>gi|123445199|ref|XP_001311362.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
gi|121893168|gb|EAX98432.1| F/Y-rich N-terminus family protein [Trichomonas vaginalis G3]
Length = 1639
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 131/217 (60%), Gaps = 9/217 (4%)
Query: 292 LKSASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
L+ R ++ E EL++ ++ +F +++TT EI + + F W++ +
Sbjct: 327 LRGTKIERQLIFENELYYEG--------TEIPRFQIMLTTGEIALKSKTVFEQFEWQVLV 378
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
DEAHRLK+ KLL ++ +++VL++GTPLQNN+ ELF+LLNF++PQ F + F
Sbjct: 379 FDEAHRLKSHTSKLLLAVKEFKSQYKVLMTGTPLQNNIGELFTLLNFIDPQLFDDRTKFS 438
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
F L + ++ +L+ L++P MLRRLK DVEK + P EE ++E +T Q++YYR +
Sbjct: 439 ESFADLSEKKQIVELKELIEPFMLRRLKGDVEKKLIPLEEIIIECGMTKSQREYYRAVFT 498
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+N FL++ + NL N MELRK C HPYL+ G
Sbjct: 499 KNQEFLTR-CEKRRLANLNNISMELRKVCNHPYLITG 534
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 70/127 (55%), Gaps = 20/127 (15%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
+ K P SD+ + +P K+ L YQL+GLN+L+ SWF N I+ADEM
Sbjct: 225 RPKGPLSDFKPVSVAPKSKSGKVLYKYQLDGLNFLIHSWFKNNNAIIADEM--------- 275
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWTDLNVI 126
GLGKT Q TF+D + K+ I GPFL++ PLST+ +W RE WTDL V+
Sbjct: 276 ----------GLGKTAQVSTFLDFLNKSQKIFGPFLIVVPLSTLDHWYRELTDWTDLKVL 325
Query: 127 VYHATFV 133
+ T +
Sbjct: 326 ILRGTKI 332
>gi|432920325|ref|XP_004079948.1| PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Oryzias
latipes]
Length = 1963
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/216 (43%), Positives = 131/216 (60%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F + K F ++ + KFHVL+T++E++ D LK W +
Sbjct: 838 SRAIIRENEFSFDDTAVKGGKKAFKLRREAPIKFHVLLTSYELVTIDQTALKSIEWACLV 897
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P +F+N E F+
Sbjct: 898 VDEAHRLKNNQSKFFRRLNDYKIDYKLLLTGTPLQNNLEELFHLLNFLTPNRFNNLEGFL 957
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K +T + +KYY+ IL
Sbjct: 958 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTDTYMIFFFFFKSRKYYKLILT 1017
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+NF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 1018 KNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 1051
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 79/152 (51%), Gaps = 34/152 (22%)
Query: 17 VKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
+K E+ P V TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 736 IKYEEQPDFVTATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG--------------- 780
Query: 75 DEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFV 133
LGKTIQ++ F+ ++FK G +GPFLV APLSTI NW+REFE W F
Sbjct: 781 ----LGKTIQTIVFLYSLFKEGHTKGPFLVSAPLSTIINWEREFEMWA--------PDFY 828
Query: 134 VLLQTGSKFFRICL---EF-FVDAVFKTGIRG 161
V+ TG K R + EF F D K G +
Sbjct: 829 VVTYTGDKDSRAIIRENEFSFDDTAVKGGKKA 860
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ ++FK G +GPFLV APLSTI NW+REFE W D V+ Y G +
Sbjct: 790 FLYSLFKEGHTKGPFLVSAPLSTIINWEREFEMWAPDFYVVTYTGDK 836
>gi|156843751|ref|XP_001644941.1| hypothetical protein Kpol_1025p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156115595|gb|EDO17083.1| hypothetical protein Kpol_1025p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 1507
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 130/210 (61%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++EYE + N K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 489 SRDAIREYEFY----TNPQAKGKKNIKFNVLLTTYEYILKDRSELGSVKWQFLAVDEAHR 544
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 545 LKNAESSLYESLNSFKVSNRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDE 604
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E + L L+P +LRRLK+DVEKS+ K E ++ VEL+++Q YY+ IL +N+S L
Sbjct: 605 EQEHYIRDLHQRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTDYYKNILTKNYSAL 664
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ GT + +L+N M EL+K HPYL +
Sbjct: 665 TAGTKGGHF-SLLNVMTELKKASNHPYLFD 693
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 66/121 (54%), Gaps = 22/121 (18%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PP + KL P + + LR +QL G+NW+ F W N ILADEMGLGKT+Q
Sbjct: 384 QRPP---FEKLSVQPSFIKNGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQ--- 437
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
T+ L+++ V+ GP LV+ PLST+P WQ FE W+ DLN I
Sbjct: 438 -------------TVAFLSWL--VYARRQNGPHLVVVPLSTMPAWQETFEKWSPDLNCIY 482
Query: 128 Y 128
Y
Sbjct: 483 Y 483
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
V+ GP LV+ PLST+P WQ FE W+ DLN I Y G +K
Sbjct: 446 VYARRQNGPHLVVVPLSTMPAWQETFEKWSPDLNCIYYMGNQK 488
>gi|401840653|gb|EJT43386.1| CHD1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 1468
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 131/210 (62%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++EYE + N K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 462 SRDTIREYEFY----TNPQAKGKKTMKFNVLLTTYEYILKDRAELGGIKWQFMAVDEAHR 517
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 518 LKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDA 577
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E ++ L ++P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+S L
Sbjct: 578 EQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSAL 637
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ G + +L+N M EL+K HPYL +
Sbjct: 638 TAGAKGGHF-SLLNIMNELKKASNHPYLFD 666
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + LR +QL G+NW+ F W G N ILADEMGLGKT+Q
Sbjct: 363 KLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQ------------ 410
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ +F GP +++ PLST+P W FE W+ DLN I Y
Sbjct: 411 ----TVAFISWL--IFARRQNGPHIIVVPLSTMPAWLDTFEKWSPDLNCICY 456
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
+F GP +++ PLST+P W FE W+ DLN I Y G +K
Sbjct: 419 IFARRQNGPHIIVVPLSTMPAWLDTFEKWSPDLNCICYMGNQK 461
>gi|255718763|ref|XP_002555662.1| KLTH0G14498p [Lachancea thermotolerans]
gi|238937046|emb|CAR25225.1| KLTH0G14498p [Lachancea thermotolerans CBS 6340]
Length = 1436
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 132/210 (62%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++E E + N K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 443 SRDAIRENEFY----TNPQAKTKKHAKFNVLLTTYEYILKDRAELGAMKWQFLAVDEAHR 498
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 499 LKNSESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDE 558
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E+ + +L L+P +LRRLK+DVEKS+ K E ++ VEL+++Q YY+ IL +N+S L
Sbjct: 559 EQETYIRELHSRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTDYYKNILTKNYSAL 618
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
S G+ A+ +L+N M EL+K HPYL +
Sbjct: 619 SAGSKGAHF-SLLNIMNELKKASNHPYLFD 647
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 31/153 (20%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL + P + LR +QL G+NW+ F W N ILADEMGLGKT+Q
Sbjct: 344 KLSEQPSFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQ------------ 391
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHATFVVLL 136
T+ ++++ ++ GP LV+ PLST+P WQ FE W DLN I +
Sbjct: 392 ----TVAFISWL--IYARRQNGPHLVVVPLSTMPAWQETFEKWAPDLNCIYF-------- 437
Query: 137 QTGSKFFRICL---EFFVDAVFKTGIRGPFLVI 166
G++ R + EF+ + KT F V+
Sbjct: 438 -MGNQKSRDAIRENEFYTNPQAKTKKHAKFNVL 469
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
GP LV+ PLST+P WQ FE W DLN I + G +K
Sbjct: 407 GPHLVVVPLSTMPAWQETFEKWAPDLNCIYFMGNQK 442
>gi|291240565|ref|XP_002740192.1| PREDICTED: Chromodomain-helicase-DNA-binding protein 1-like
[Saccoglossus kowalevskii]
Length = 938
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 134/209 (64%), Gaps = 10/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRN ++EYE F ++++ +F+ LITT+EI++ D L NW I+DEAHR
Sbjct: 603 SRNKIREYEWCFAGNRSRL-------RFNALITTYEILLKDKSFLNSVNWSNLIVDEAHR 655
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L H HR+L++GTPLQN++ EL+SLL+F+ P +F + E F E +
Sbjct: 656 LKNDDSLLYKTLMDFHTHHRLLITGTPLQNSLKELWSLLHFIMPVKFDSWEQFEKE--HM 713
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
++ L +L+P +LRR+K+DVEKS+ K E ++ VE++ QK+YY+ IL +N+ L
Sbjct: 714 ADQNGYTSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSAKQKQYYKWILTKNYKAL 773
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
SKG N+ +N MMEL+K C HPYL+
Sbjct: 774 SKG-LKGNLSGFLNIMMELKKLCNHPYLI 801
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 61/105 (58%), Gaps = 21/105 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR YQL+GLNWL+ SW ILADEMGL GKTIQ++ F+
Sbjct: 517 LRDYQLDGLNWLLHSWCKENGVILADEMGL-------------------GKTIQAIAFLS 557
Query: 91 AVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHATFV 133
+F T + GPFL++ PLST+ WQREFE W DLNV+VY V
Sbjct: 558 YLFNTYQLYGPFLLVVPLSTMTAWQREFEIWAPDLNVVVYIGDLV 602
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ +F T + GPFL++ PLST+ WQREFE W DLNV+VY G
Sbjct: 555 FLSYLFNTYQLYGPFLLVVPLSTMTAWQREFEIWAPDLNVVVYIG 599
>gi|190405721|gb|EDV08988.1| chromo domain protein 1 [Saccharomyces cerevisiae RM11-1a]
Length = 1436
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 131/210 (62%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++EYE + N K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 430 SRDTIREYEFY----TNPRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHR 485
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 486 LKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDE 545
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E ++ L ++P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+S L
Sbjct: 546 EQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSAL 605
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ G + +L+N M EL+K HPYL +
Sbjct: 606 TAGAKGGHF-SLLNIMNELKKASNHPYLFD 634
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + LR +QL G+NW+ F W G N ILADEMGLGKT+Q
Sbjct: 331 KLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQ------------ 378
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ +F GP +++ PLST+P W FE W DLN I Y
Sbjct: 379 ----TVAFISWL--IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICY 424
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
+F GP +++ PLST+P W FE W DLN I Y G +K
Sbjct: 387 IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQK 429
>gi|190347873|gb|EDK40225.2| hypothetical protein PGUG_04323 [Meyerozyma guilliermondii ATCC
6260]
Length = 1367
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 133/213 (62%), Gaps = 11/213 (5%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ SR +++YEL+ + KF+V++TT+E I+ D EL W+ +DEA
Sbjct: 415 TESRATIRDYELY----------DGKKIKFNVMLTTYEYILKDRNELGSIKWQFLAVDEA 464
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN L E LR + +R+L++GTPLQNN+ EL +L NFL P +F+ ++ E
Sbjct: 465 HRLKNAESSLYESLRSFRVANRLLITGTPLQNNIKELAALCNFLLPGRFNIDQEIDFETP 524
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
+ E + +LQ +KP +LRRLK+DVEKS+ K E ++ VEL+++Q YY+ I+ +N+S
Sbjct: 525 DAEQEKYIKELQQNIKPYILRRLKKDVEKSLPSKTERILRVELSDMQTDYYKNIITKNYS 584
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L+ G + + + +L+N M EL+K HPYL +G
Sbjct: 585 ALNAGNSGSQI-SLLNVMAELKKASNHPYLFDG 616
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 62/112 (55%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL K P++ + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 318 KLVKQPLFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQ------------ 365
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
TI L+++ ++ GP LV+ PLSTIP WQ FE W D+N I Y
Sbjct: 366 ----TIAFLSWL--IYARRQNGPHLVVVPLSTIPAWQETFEKWAPDVNCIYY 411
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GP LV+ PLSTIP WQ FE W D+N I Y G
Sbjct: 381 GPHLVVVPLSTIPAWQETFEKWAPDVNCIYYLG 413
>gi|326428031|gb|EGD73601.1| SNF2 family DNA-dependent ATPase [Salpingoeca sp. ATCC 50818]
Length = 2192
Score = 165 bits (418), Expect = 5e-38, Method: Composition-based stats.
Identities = 87/187 (46%), Positives = 122/187 (65%), Gaps = 5/187 (2%)
Query: 326 HVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPL 385
VL+TT+E++ D + FN+ ++DEAHRLKN N +L LR L R+LL+GTP+
Sbjct: 192 QVLLTTYEMVSKDKRMFRIFNYDCVVVDEAHRLKNENSQLSLSLRALKSSFRLLLTGTPI 251
Query: 386 QNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKT----ESEVNKLQLLLKPMMLRRLKED 441
QNN++EL+SLLNFL PQ F + F + F +KT + + KL +LKP LRRLK+D
Sbjct: 252 QNNMHELWSLLNFLFPQLFGESTTFDTLF-DVKTGHADKDVLAKLHYILKPFTLRRLKQD 310
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCI 501
VEK++ K ET + V LT++QKKYY+ ILE++ L + L+NT+M+LRK C
Sbjct: 311 VEKALPDKIETNLYVTLTDLQKKYYKAILEKDVHGLLAEMRGRSKTRLLNTIMQLRKACN 370
Query: 502 HPYLLNG 508
HPYL +G
Sbjct: 371 HPYLFDG 377
Score = 58.2 bits (139), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 20/103 (19%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
TLR YQLE L + + +G ILADEMGLGKT+Q+++ +
Sbjct: 87 TLRPYQLESLQFFANLYRHG------------------VSGGILADEMGLGKTLQTISLL 128
Query: 90 DAVFKTGI-RGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
+ + + RG LV PLS + +W EF+ W L V VYH
Sbjct: 129 AYLHEHNLSRGVHLVTCPLSVLGSWSNEFKRWCPSLTVQVYHG 171
>gi|366987099|ref|XP_003673316.1| hypothetical protein NCAS_0A03690 [Naumovozyma castellii CBS 4309]
gi|342299179|emb|CCC66927.1| hypothetical protein NCAS_0A03690 [Naumovozyma castellii CBS 4309]
Length = 1457
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 132/210 (62%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++E+E + N + K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 468 SRDAIREFEFY----TNPYAKGKKNIKFNVLLTTYEYILKDRSELGSIKWQFLAVDEAHR 523
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 524 LKNAESSLYESLNSFKVNNRLLITGTPLQNNIKELAALINFLMPGRFTIDQEIDFENQDE 583
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E + L L+P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+S L
Sbjct: 584 EQEEYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSAL 643
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ G+ + +L+N M EL+K HPYL +
Sbjct: 644 TAGSKGGHF-SLLNIMSELKKASNHPYLFD 672
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL + P Y LR +QL G+NW+ F W N ILADEMGLGKT+Q
Sbjct: 369 KLVEQPSYVKFGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQ------------ 416
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ ++ GP +V+ PLST+P WQ F+ W DLNVI Y
Sbjct: 417 ----TVAFISWL--IYARRQNGPHIVVVPLSTMPAWQETFDKWAPDLNVICY 462
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
GP +V+ PLST+P WQ F+ W DLNVI Y G ++
Sbjct: 432 GPHIVVVPLSTMPAWQETFDKWAPDLNVICYMGNQR 467
>gi|145348183|ref|XP_001418535.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578764|gb|ABO96828.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1326
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 131/218 (60%), Gaps = 14/218 (6%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++A R M E+E F + KF V++ +FE + + + F+W +C++DE
Sbjct: 381 SAADREMCAEHEFFIPGTRR--------VKFDVMLVSFENVRRNTELFEQFSWAMCVVDE 432
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AH+LK+ N + + L + +LL+GTP+QNN+ EL+ +L+ L+P+QF + E F EF
Sbjct: 433 AHKLKDVNSQTTLSVTALRYDWLLLLTGTPIQNNIKELYGMLHILDPRQFHSWEDFQDEF 492
Query: 415 ----GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGIL 470
G + E +V +L+ LLKP MLRR+KEDVEK I KEE VV VELT Q+ YYR +
Sbjct: 493 CDESGDVDAE-QVMRLRELLKPRMLRRMKEDVEK-IPAKEEVVVWVELTAQQRGYYRALY 550
Query: 471 ERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
E L +G+ +VP L N MELRK C HP+L +G
Sbjct: 551 ENQIHVLLEGSKVKSVPQLRNLSMELRKVCNHPFLCDG 588
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 21/111 (18%)
Query: 23 PVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKT 82
P ++N+ LR YQ+ W++ ++ GRN IL DEMGLGKT Q CI
Sbjct: 290 PEFQNNMALREYQVTSFEWMVNNYCRGRNVILGDEMGLGKTAQ-----CI---------- 334
Query: 83 IQSLTFVDAVFKTGI--RGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHAT 131
+ ++ V K I R P V+APL+T+ +W+RE E WTD+N +VY +
Sbjct: 335 ----SVIEYVRKNLIRRRQPVCVVAPLTTLGHWKREMEKWTDMNAVVYDGS 381
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 160 RGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
R P V+APL+T+ +W+RE E WTD+N +VY G
Sbjct: 348 RQPVCVVAPLTTLGHWKREMEKWTDMNAVVYDG 380
>gi|256271313|gb|EEU06383.1| Chd1p [Saccharomyces cerevisiae JAY291]
Length = 1468
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 131/210 (62%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++EYE + N K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 462 SRDTIREYEFY----TNPRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHR 517
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 518 LKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDE 577
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E ++ L ++P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+S L
Sbjct: 578 EQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSAL 637
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ G + +L+N M EL+K HPYL +
Sbjct: 638 TAGAKGGHF-SLLNIMNELKKASNHPYLFD 666
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + LR +QL G+NW+ F W G N ILADEMGLGKT+Q
Sbjct: 363 KLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQ------------ 410
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ +F GP +++ PLST+P W FE W DLN I Y
Sbjct: 411 ----TVAFISWL--IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICY 456
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
+F GP +++ PLST+P W FE W DLN I Y G +K
Sbjct: 419 IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQK 461
>gi|393217337|gb|EJD02826.1| transcription regulator [Fomitiporia mediterranea MF3/22]
Length = 1457
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 130/214 (60%), Gaps = 8/214 (3%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+S SR +++ YE++ K++ +K +VL+TT+E+I+ D L D W+ +DE
Sbjct: 488 SSRSREVIRNYEVYAEPSKSKKVK------MNVLLTTYELILRDAAMLGDIKWQALAVDE 541
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN +L E LR H ++L++GTPLQNNV EL SL++FL P++F+ F +
Sbjct: 542 AHRLKNSESQLYEALRTFHAASKLLITGTPLQNNVKELLSLMHFLMPEKFALTNEF--DL 599
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
E+++ +L L+ +MLRRLK DV KS+ K E ++ VE++ +Q +Y+ IL +N+
Sbjct: 600 ADADHEAKIKELHKQLESLMLRRLKRDVVKSLPTKSERILRVEMSALQTHFYKNILTKNY 659
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L K +L+N MEL+K HPYL +G
Sbjct: 660 QGLVKSANGNGNISLLNIAMELKKAANHPYLFDG 693
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 70/125 (56%), Gaps = 23/125 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYK--NDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
PK K P ++VK++K P Y L+ +QL GLNWL + W G N ILADEMGLGKT+
Sbjct: 381 PKDKRP--EFVKIKKDPDYVEVTGGELKDFQLTGLNWLAYLWSKGENGILADEMGLGKTV 438
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DL 123
Q T+ L+++ + GPFLVI PLSTI WQ +F AW DL
Sbjct: 439 Q----------------TVAFLSYL--FHQHNQYGPFLVIVPLSTITAWQMQFAAWAPDL 480
Query: 124 NVIVY 128
NVI Y
Sbjct: 481 NVICY 485
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERLR 206
GPFLVI PLSTI WQ +F AW DLNVI Y G S R +E +R
Sbjct: 455 GPFLVIVPLSTITAWQMQFAAWAPDLNVICYIG-----SSRSREVIR 496
>gi|47221566|emb|CAF97831.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1989
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 125/215 (58%), Gaps = 20/215 (9%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F + K +K+ KFHVL+T++E+I D L W +
Sbjct: 751 SRAVIRENEFSFEGNAIRGGKKASKMKKDSTVKFHVLLTSYELITIDQAVLGSIEWACLV 810
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 811 VDEAHRLKNNQSKFFRVLNNYQLQHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 870
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K L IQ+KYY+ IL
Sbjct: 871 EEFADIAKEGQIKKLHDMLGPHMLRRLKADVFK-------------LHAIQEKYYKFILT 917
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 918 RNFEALNT-RGGGNQVSLLNVVMDLKKCCNHPYLF 951
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 71/128 (55%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P P +K ++ P Y TL YQLEGLNWL FSW + ILADEMG
Sbjct: 637 ERPPANPVVDPTIKFDRQPDYLDSTGGTLHPYQLEGLNWLRFSWAQATDTILADEMG--- 693
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 694 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 737
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 738 PDMYVVTY 745
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 703 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 749
>gi|190347724|gb|EDK40055.2| hypothetical protein PGUG_04153 [Meyerozyma guilliermondii ATCC
6260]
Length = 990
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 127/184 (69%), Gaps = 1/184 (0%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V+I+++EI+I + + FNW+ +IDEAHR+KN + L + +R+ H ++R+L++GTP
Sbjct: 239 FDVVISSYEIVIREKSAFRKFNWQYIVIDEAHRIKNEDSLLSQIVRMFHSKNRLLITGTP 298
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEK 444
LQNN++EL++LLNFL P F +++ F E+ Q E+ V +L +LKP +LRR+K DVEK
Sbjct: 299 LQNNLHELWALLNFLLPDVFGDSDTF-DEWFQSDEENLVQQLHKVLKPFLLRRIKSDVEK 357
Query: 445 SIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPY 504
S+ PK+E + +T++Q+ +Y+ ILE++ ++ + L+N +M+LRKCC HPY
Sbjct: 358 SLLPKKELNIYCGMTDMQRSWYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKCCNHPY 417
Query: 505 LLNG 508
L G
Sbjct: 418 LFEG 421
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 55/100 (55%), Gaps = 19/100 (19%)
Query: 22 SPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGK 81
SP Y + LR YQ++GLNWL+ N + ILADEMGLGKT+Q
Sbjct: 131 SPAYVH-GKLREYQIQGLNWLVSLHENNLSGILADEMGLGKTLQ---------------- 173
Query: 82 TIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT 121
TI L ++ + K I GP LV+ P ST+ NW REF WT
Sbjct: 174 TISFLGYLRYIKK--INGPHLVVVPKSTLDNWAREFARWT 211
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRD 201
I GP LV+ P ST+ NW REF WT +++V++ G K +R D
Sbjct: 187 INGPHLVVVPKSTLDNWAREFARWTPEVHVLLLQG--DKDTRHD 228
>gi|344305047|gb|EGW35279.1| hypothetical protein SPAPADRAFT_64429 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1000
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 126/189 (66%), Gaps = 5/189 (2%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V+I ++EI+I + K F+W IIDEAHR+KN L + +R+ H ++R+L++GTP
Sbjct: 233 FDVIIASYEIVIREKSTFKKFDWEYIIIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTP 292
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK-TESEVNK----LQLLLKPMMLRRLK 439
LQNN+ EL++LLNF+ P F++N++F F Q E E NK L +LKP +LRR+K
Sbjct: 293 LQNNLRELWALLNFILPDVFADNDSFDEWFHQDNPNEDEDNKVIVQLHKVLKPFLLRRIK 352
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEKS+ PK+E V V+++++QK +Y+ ILE++ ++ + L+N +M+LRKC
Sbjct: 353 ADVEKSLLPKKELNVYVKMSDMQKNWYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKC 412
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 413 CNHPYLFEG 421
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 19/107 (17%)
Query: 22 SPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGK 81
SP Y ++ LR YQ++GLNWL+ + N + ILADEMGLGKT+Q+++ +G +
Sbjct: 124 SPGYIHNGKLRPYQIQGLNWLISLYENNLSGILADEMGLGKTLQTISF-------LGYLR 176
Query: 82 TIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
I++ I GP +VIAP ST+ NW+REF W D+ V+V
Sbjct: 177 YIRN-----------INGPHIVIAPKSTLDNWRREFNRWIPDIKVLV 212
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
I GP +VIAP ST+ NW+REF W D+ V+V G +++
Sbjct: 180 NINGPHIVIAPKSTLDNWRREFNRWIPDIKVLVVQGDKEE 219
>gi|259146092|emb|CAY79352.1| Chd1p [Saccharomyces cerevisiae EC1118]
gi|323348857|gb|EGA83095.1| Chd1p [Saccharomyces cerevisiae Lalvin QA23]
gi|349577825|dbj|GAA22993.1| K7_Chd1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1468
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 131/210 (62%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++EYE + N K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 462 SRDTIREYEFY----TNPRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHR 517
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 518 LKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDE 577
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E ++ L ++P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+S L
Sbjct: 578 EQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSAL 637
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ G + +L+N M EL+K HPYL +
Sbjct: 638 TAGAKGGHF-SLLNIMNELKKASNHPYLFD 666
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + LR +QL G+NW+ F W G N ILADEMGLGKT+Q
Sbjct: 363 KLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQ------------ 410
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ +F GP +++ PLST+P W FE W DLN I Y
Sbjct: 411 ----TVAFISWL--IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICY 456
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
+F GP +++ PLST+P W FE W DLN I Y G +K
Sbjct: 419 IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQK 461
>gi|6321012|ref|NP_011091.1| Chd1p [Saccharomyces cerevisiae S288c]
gi|418395|sp|P32657.1|CHD1_YEAST RecName: Full=Chromo domain-containing protein 1; AltName:
Full=ATP-dependent helicase CHD1
gi|603404|gb|AAB64691.1| Chd1p: transcriptional regulator [Saccharomyces cerevisiae]
gi|285811798|tpg|DAA07826.1| TPA: Chd1p [Saccharomyces cerevisiae S288c]
gi|392299868|gb|EIW10960.1| Chd1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1468
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 131/210 (62%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++EYE + N K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 462 SRDTIREYEFY----TNPRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHR 517
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 518 LKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDE 577
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E ++ L ++P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+S L
Sbjct: 578 EQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSAL 637
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ G + +L+N M EL+K HPYL +
Sbjct: 638 TAGAKGGHF-SLLNIMNELKKASNHPYLFD 666
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + LR +QL G+NW+ F W G N ILADEMGLGKT+Q
Sbjct: 363 KLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQ------------ 410
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ +F GP +++ PLST+P W FE W DLN I Y
Sbjct: 411 ----TVAFISWL--IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICY 456
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
+F GP +++ PLST+P W FE W DLN I Y G +K
Sbjct: 419 IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQK 461
>gi|151944881|gb|EDN63140.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
YJM789]
Length = 1468
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 131/210 (62%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++EYE + N K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 462 SRDTIREYEFY----TNPRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHR 517
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 518 LKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDE 577
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E ++ L ++P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+S L
Sbjct: 578 EQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSAL 637
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ G + +L+N M EL+K HPYL +
Sbjct: 638 TAGAKGGHF-SLLNIMNELKKASNHPYLFD 666
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + LR +QL G+NW+ F W G N ILADEMGLGKT+Q
Sbjct: 363 KLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQ------------ 410
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ +F GP +++ PLST+P W FE W DLN I Y
Sbjct: 411 ----TVAFISWL--IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICY 456
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
+F GP +++ PLST+P W FE W DLN I Y G +K
Sbjct: 419 IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQK 461
>gi|355678692|gb|AER96187.1| chromodomain helicase DNA binding protein 6 [Mustela putorius furo]
Length = 169
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/112 (68%), Positives = 92/112 (82%), Gaps = 6/112 (5%)
Query: 403 QFSNNEAFMSEFGQLKTESEVNKLQL------LLKPMMLRRLKEDVEKSIAPKEETVVEV 456
QF + AF+ EFG LKTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EV
Sbjct: 2 QFPSETAFLEEFGDLKTEEQVKKLQQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEV 61
Query: 457 ELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
ELTNIQKKYYR ILE+NFSFL+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 62 ELTNIQKKYYRAILEKNFSFLTKGANQHNMPNLINTMMELRKCCNHPYLING 113
>gi|407040391|gb|EKE40105.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
nuttalli P19]
Length = 1243
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 127/192 (66%), Gaps = 2/192 (1%)
Query: 316 FIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLE 375
F +K KF+VL+T+FE++I D F+W+ ++DEAHRLKN +L E L E
Sbjct: 446 FGNKKGTIKFNVLLTSFELVIKDQDVFNQFHWKYTVVDEAHRLKNNEGQLYEVLMRTTTE 505
Query: 376 HRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMML 435
+++L++GTPLQN + EL+SLL+FL P++F + E F + TE E+NK+ LKP +L
Sbjct: 506 NKLLITGTPLQNTLKELWSLLHFLHPKKFISFEEFEKTYSVEGTE-EINKIHNELKPYLL 564
Query: 436 RRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMME 495
RR+K+DVEKS+ PK+E ++ VEL+ IQK+YYR I+ +N L K +LMN ME
Sbjct: 565 RRMKKDVEKSLPPKKERILRVELSPIQKQYYRWIITKNSDALKKAVQQQKT-SLMNICME 623
Query: 496 LRKCCIHPYLLN 507
L+K C HP L+N
Sbjct: 624 LKKLCNHPILIN 635
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 69/126 (54%), Gaps = 23/126 (18%)
Query: 5 KKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
+K + P ++K + P KN LR YQ+EG+NW+ +++ N ILADEMGL
Sbjct: 326 EKKRSTPLPRKFIKFVEGPEVKN--KLRDYQIEGVNWITYAFSQNTNVILADEMGL---- 379
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKT+Q++TF+ ++ I GPFLVI PLSTI NW +EF W
Sbjct: 380 ---------------GKTVQTITFIKHLYDNYNIIGPFLVIVPLSTISNWSKEFNKWAPK 424
Query: 123 LNVIVY 128
LN +VY
Sbjct: 425 LNCVVY 430
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
I GPFLVI PLSTI NW +EF W LN +VY G
Sbjct: 398 IIGPFLVIVPLSTISNWSKEFNKWAPKLNCVVYTG 432
>gi|366999422|ref|XP_003684447.1| hypothetical protein TPHA_0B03430 [Tetrapisispora phaffii CBS 4417]
gi|357522743|emb|CCE62013.1| hypothetical protein TPHA_0B03430 [Tetrapisispora phaffii CBS 4417]
Length = 1517
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 132/210 (62%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR++++E+E + N K K KF+VL+TT+E I+ D EL + W+ +DEAHR
Sbjct: 481 SRDLIREFEFY----TNPNAKTKKHIKFNVLLTTYEYILKDRTELGNIKWQFLAVDEAHR 536
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L++FL P +F ++ E
Sbjct: 537 LKNAESSLYESLNSFKVTNRLLITGTPLQNNIKELAALVDFLMPNRFQIDQEIDFENQDS 596
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E + L L+P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+S L
Sbjct: 597 EQEEYIRTLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSAL 656
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ GT + +L+N M EL+K HPYL +
Sbjct: 657 TAGTKGGHF-SLLNIMSELKKASNHPYLFD 685
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL++ P + + LR +QL G+NW+ F W N ILADEMGLGKT+Q
Sbjct: 382 KLDEQPSFIKNGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQ------------ 429
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ ++ GP LV+ PLSTIP WQ FE W DLN I Y
Sbjct: 430 ----TVAFISWL--IYARRQNGPHLVVVPLSTIPAWQETFEKWAPDLNCIYY 475
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
GP LV+ PLSTIP WQ FE W DLN I Y G +K
Sbjct: 445 GPHLVVVPLSTIPAWQETFEKWAPDLNCIYYMGNQK 480
>gi|67478494|ref|XP_654639.1| chromodomain-helicase-DNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56471706|gb|EAL49253.1| chromodomain-helicase-DNA-binding protein, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449708079|gb|EMD47606.1| chromodomain helicase DNA binding protein, putative [Entamoeba
histolytica KU27]
Length = 1262
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 127/192 (66%), Gaps = 2/192 (1%)
Query: 316 FIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLE 375
F +K KF+VL+T+FE++I D F+W+ ++DEAHRLKN +L E L E
Sbjct: 465 FGNKKGTIKFNVLLTSFELVIKDQDVFNQFHWKYTVVDEAHRLKNNEGQLYEVLMRTTTE 524
Query: 376 HRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMML 435
+++L++GTPLQN + EL+SLL+FL P++F + E F + TE E+NK+ LKP +L
Sbjct: 525 NKLLITGTPLQNTLKELWSLLHFLHPKKFISFEEFEKTYSVEGTE-EINKIHNELKPYLL 583
Query: 436 RRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMME 495
RR+K+DVEKS+ PK+E ++ VEL+ IQK+YYR I+ +N L K +LMN ME
Sbjct: 584 RRMKKDVEKSLPPKKERILRVELSPIQKQYYRWIITKNSDALKKAVQQQKT-SLMNICME 642
Query: 496 LRKCCIHPYLLN 507
L+K C HP L+N
Sbjct: 643 LKKLCNHPILIN 654
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 66/120 (55%), Gaps = 23/120 (19%)
Query: 11 PPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
P ++K + P KN LR YQ+EG+NW+ +++ N ILADEMGL
Sbjct: 351 PLPRKFIKFVEGPEVKN--KLRDYQIEGVNWITYAFSQNTNVILADEMGL---------- 398
Query: 71 CILADEMGLGKTIQSLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GKT+Q++TF+ ++ I GPFLVI PLSTI NW +EF W LN +VY
Sbjct: 399 ---------GKTVQTITFIRHLYDNYNIIGPFLVIVPLSTISNWSKEFNKWAPKLNCVVY 449
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
I GPFLVI PLSTI NW +EF W LN +VY G
Sbjct: 417 IIGPFLVIVPLSTISNWSKEFNKWAPKLNCVVYTG 451
>gi|448513927|ref|XP_003867021.1| Isw1 protein [Candida orthopsilosis Co 90-125]
gi|380351359|emb|CCG21583.1| Isw1 protein [Candida orthopsilosis Co 90-125]
Length = 1026
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 126/188 (67%), Gaps = 4/188 (2%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V++ ++EI+I + K F+W +IDEAHR+KN L + +R+ H ++R+L++GTP
Sbjct: 232 FDVIVASYEIVIREKATFKKFDWEYIVIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTP 291
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLKE 440
LQNN+ EL++LLNF+ P F++N++F F + +T E +++L +LKP +LRR+K
Sbjct: 292 LQNNLRELWALLNFILPDVFADNDSFDEWFQKDETSEEDGEVISQLHKVLKPFLLRRIKA 351
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
DVEKS+ PK+E + ++T +QK Y+ ILE++ ++ + L+N +M+LRKCC
Sbjct: 352 DVEKSLLPKKELNIYTKMTTMQKNLYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKCC 411
Query: 501 IHPYLLNG 508
HPYL +G
Sbjct: 412 NHPYLFDG 419
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 20/108 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP Y N LR YQ++GLNWL+ + N + ILADEMGLGKT+Q
Sbjct: 123 ESPGYVN-GELRPYQIQGLNWLVSLYENNLSGILADEMGLGKTLQ--------------- 166
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ ++K I GP LVIAP ST+ NW REF+ W D+NV+V
Sbjct: 167 -TISFLGYLRFMYK--INGPHLVIAPKSTLDNWYREFQRWIPDINVLV 211
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
F I GP LVIAP ST+ NW REF+ W D+NV+V G + + S K R+
Sbjct: 176 FMYKINGPHLVIAPKSTLDNWYREFQRWIPDINVLVLQGDKDERSDLIKNRV 227
>gi|255720466|ref|XP_002556513.1| KLTH0H15158p [Lachancea thermotolerans]
gi|238942479|emb|CAR30651.1| KLTH0H15158p [Lachancea thermotolerans CBS 6340]
Length = 1021
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 127/191 (66%), Gaps = 7/191 (3%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF VLIT++E++I + LK F W+ I+DEAHR+KN L + +RL H E R+L++GT
Sbjct: 228 KFDVLITSYEMVIREKATLKRFRWQYIIVDEAHRIKNEESALSQIIRLFHSEGRLLITGT 287
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P F +++AF F Q T+ + V +L +L P +LRRLK
Sbjct: 288 PLQNNLHELWALLNFLLPDVFGDSDAFDEWFQQNNTDEDQEVVVQQLHTVLSPFLLRRLK 347
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSK--GTTSANVPNLMNTMMELR 497
+VE S+ PK ET + V +T++Q ++Y+ +LE++ ++ G N L+N +M+LR
Sbjct: 348 SEVETSLLPKIETNLYVGMTDMQVQWYKSLLEKDLDAVNGAIGKREGNT-RLLNIVMQLR 406
Query: 498 KCCIHPYLLNG 508
KCC HPYL G
Sbjct: 407 KCCNHPYLFEG 417
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 62/110 (56%), Gaps = 19/110 (17%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
L +SP Y TLR YQ++GLNWL+ N + ILADEMGLGKT+Q
Sbjct: 117 LTESPSYIKSGTLRDYQIQGLNWLLSLHDNKLSGILADEMGLGKTLQ------------- 163
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ V GI GP ++I P ST+ NW+RE WT ++N +V
Sbjct: 164 ---TIAFLGYLRYV--KGIDGPHIIIVPKSTLNNWKRELAKWTPEVNTVV 208
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
GI GP ++I P ST+ NW+RE WT ++N +V G +
Sbjct: 176 GIDGPHIIIVPKSTLNNWKRELAKWTPEVNTVVLSGDK 213
>gi|320581684|gb|EFW95903.1| Nucleosome remodeling factor [Ogataea parapolymorpha DL-1]
Length = 1384
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 131/213 (61%), Gaps = 8/213 (3%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ SR +++YE + ++ + KF+VL+TT+E I+ D EL F W+ +DEA
Sbjct: 445 TKSRKAIRDYEFYVGGNRKKV-------KFNVLLTTYEYILKDRAELGSFKWQYLAVDEA 497
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN L E L + +R+L++GTPLQNN+ EL +L NFL P +F ++ +
Sbjct: 498 HRLKNAESSLYESLSEFKVANRLLITGTPLQNNLKELAALCNFLMPGKFQIDQEIDFDTP 557
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
+ E + LQ +KP +LRRLK+DVE S+ K E ++ VEL++IQ +YY+ IL +N+
Sbjct: 558 NAEAEGYIKALQAEIKPFILRRLKKDVETSLPGKTERILRVELSDIQTEYYKNILTKNYG 617
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L++G + + +L+N M EL+K HPYL +G
Sbjct: 618 ALNQGPRGSQI-SLLNIMAELKKASNHPYLFDG 649
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P++ + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 348 KLTSQPLFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQ------------ 395
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ L+++ ++ GP LV+ PLST+P WQ F+ W D+NVI Y
Sbjct: 396 ----TVSFLSWL--IYARRQNGPHLVVVPLSTVPAWQETFDKWAPDVNVIYY 441
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
GP LV+ PLST+P WQ F+ W D+NVI Y G K
Sbjct: 411 GPHLVVVPLSTVPAWQETFDKWAPDVNVIYYMGNTK 446
>gi|401625980|gb|EJS43951.1| chd1p [Saccharomyces arboricola H-6]
Length = 1470
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 131/210 (62%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++EYE + N K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 464 SRDTIREYEFY----TNPQAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQYMAVDEAHR 519
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 520 LKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDE 579
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E ++ L ++P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+S L
Sbjct: 580 EQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSAL 639
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ G + +L+N M EL+K HPYL +
Sbjct: 640 TAGAKGGHF-SLLNIMNELKKASNHPYLFD 668
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + LR +QL G+NW+ F W G N ILADEMGLGKT+Q
Sbjct: 365 KLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQ------------ 412
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ +F GP +++ PLST+P W FE W DLN I Y
Sbjct: 413 ----TVAFISWL--IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICY 458
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
+F GP +++ PLST+P W FE W DLN I Y G +K
Sbjct: 421 IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQK 463
>gi|254578924|ref|XP_002495448.1| ZYRO0B11638p [Zygosaccharomyces rouxii]
gi|238938338|emb|CAR26515.1| ZYRO0B11638p [Zygosaccharomyces rouxii]
Length = 1478
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 130/210 (61%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++EYE + N K K KF+VL+TT+E ++ D E W+ +DEAHR
Sbjct: 469 SRDAIREYEFY----TNPQAKGKKNVKFNVLLTTYEYVLKDRYEFSTIRWQFMAVDEAHR 524
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 525 LKNAESSLYESLNSLKVSNRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDD 584
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E + L L+P +LRRLK+DVEKS+ K E ++ VEL+++Q +YYR IL +N+S L
Sbjct: 585 EQEQYIRDLHQRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYRNILTKNYSAL 644
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ G + +L+N M EL+K HPYL +
Sbjct: 645 TAGAKGGHF-SLLNIMNELKKGSNHPYLFD 673
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + + LR +QL G+NW+ F W N ILADEMGLGKT+Q
Sbjct: 370 KLSVQPPFIKNGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQ------------ 417
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ +F GP L++ PLST+P+WQ FE W +LN I Y
Sbjct: 418 ----TVAFISWL--IFARRQNGPHLIVVPLSTMPSWQETFEKWAPELNCICY 463
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
+F GP L++ PLST+P+WQ FE W +LN I Y G +K
Sbjct: 426 IFARRQNGPHLIVVPLSTMPSWQETFEKWAPELNCICYMGNQK 468
>gi|348690488|gb|EGZ30302.1| hypothetical protein PHYSODRAFT_467062 [Phytophthora sojae]
Length = 1382
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 125/191 (65%), Gaps = 5/191 (2%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +TTFE+ + + L F WR IIDEAHR+KN + + +R+L EHR+LL+GT
Sbjct: 373 KFDVCVTTFEMCLKEKTALCKFAWRYLIIDEAHRIKNESSQFSTVVRMLDTEHRLLLTGT 432
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE-----VNKLQLLLKPMMLRRL 438
PLQNN++EL++LLNFL P F++++ F F + E +++L +L+P MLRRL
Sbjct: 433 PLQNNLHELWALLNFLLPDVFASSQEFDDWFNLDVDDDEAKKQMISQLHKILRPFMLRRL 492
Query: 439 KEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRK 498
K DVEKS+ PK+ET++ V ++ +QK Y+ +L R+ + + G + L N +M+LRK
Sbjct: 493 KADVEKSLPPKKETLLFVGMSEMQKVLYKSLLLRDMNTIMGGAGGVSKSALQNIVMQLRK 552
Query: 499 CCIHPYLLNGK 509
CC HPYL G+
Sbjct: 553 CCGHPYLFEGQ 563
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 58/115 (50%), Gaps = 19/115 (16%)
Query: 17 VKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADE 76
V+L K P T+RAYQLEGL+W++ G N ILADEMGLGKT+Q
Sbjct: 254 VRLTKQPSVIKFGTMRAYQLEGLSWMVNLAHQGINGILADEMGLGKTLQ----------- 302
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
TI L + + GP +V+ P ST+ NW EFE W L + +H
Sbjct: 303 -----TISVLAYFYEF--ENVTGPHIVLVPKSTLSNWLAEFERWCPSLRAVKFHG 350
>gi|448115219|ref|XP_004202771.1| Piso0_001627 [Millerozyma farinosa CBS 7064]
gi|359383639|emb|CCE79555.1| Piso0_001627 [Millerozyma farinosa CBS 7064]
Length = 1375
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 134/213 (62%), Gaps = 11/213 (5%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
SA+R +++YE F++N K KF++L+TT+E ++ D EL W+ +DEA
Sbjct: 426 SAARKTVRDYE-FYQNKK---------IKFNILLTTYEYVLKDRSELGSIKWQFLAVDEA 475
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN L E L+ + +R+L++GTPLQNN+ EL +L NFL P +F+ + E
Sbjct: 476 HRLKNEESSLYESLKSFKVGNRLLITGTPLQNNIKELNALCNFLMPGRFNIGQEIDFETP 535
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
+ E + LQ ++P +LRRLK+DVEKS+ K E ++ VEL+++Q +YYR IL +N+S
Sbjct: 536 NREQEQYIKDLQKNIQPFILRRLKKDVEKSLPSKSERILRVELSDLQTEYYRNILTKNYS 595
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L+ G + + +L+N + EL+K HPYL +G
Sbjct: 596 ALNAGNKGSQI-SLLNVVSELKKASNHPYLFDG 627
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL K P++ + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 329 KLVKQPLFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQ------------ 376
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ L+++ ++ GP LV+ PLSTI +WQ FE W D+N + Y
Sbjct: 377 ----TVSFLSWL--IYARRQNGPHLVVVPLSTITSWQETFEKWAPDVNCVYY 422
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GP LV+ PLSTI +WQ FE W D+N + Y G
Sbjct: 392 GPHLVVVPLSTITSWQETFEKWAPDVNCVYYLG 424
>gi|403216874|emb|CCK71370.1| hypothetical protein KNAG_0G03130 [Kazachstania naganishii CBS
8797]
Length = 1047
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 126/190 (66%), Gaps = 5/190 (2%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF VLIT++E+II + LK F W+ IIDEAHR+KN L + +RL + ++R+L++GT
Sbjct: 222 KFDVLITSYEMIIREKNILKKFAWQYIIIDEAHRIKNEQSALSQIIRLFYSKNRLLITGT 281
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P F ++E F F + TE + V +L +L P +LRR+K
Sbjct: 282 PLQNNLHELWALLNFLLPDVFGDSEVFDEWFAENNTEQDQEVLVQQLHAVLNPFLLRRVK 341
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSANVPNLMNTMMELRK 498
DVEKS+ PK ET V V +T++Q ++Y+ +LER+ ++ L+N +M+LRK
Sbjct: 342 ADVEKSLLPKIETNVYVGMTDMQVQWYKSLLERDIDAVNGAVGKREGKTRLLNIVMQLRK 401
Query: 499 CCIHPYLLNG 508
CC HPYL G
Sbjct: 402 CCNHPYLFEG 411
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 68/141 (48%), Gaps = 35/141 (24%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + TLR YQ++GLNWL+ N + ILADEMGLGKT+Q
Sbjct: 113 ESPKFVEGGTLRDYQIQGLNWLISLHENKLSGILADEMGLGKTLQ--------------- 157
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-----------------L 123
TI L ++ V + GPFLV+ P ST+ NW+REF WT +
Sbjct: 158 -TIAFLGYLRYV--KNVEGPFLVVVPKSTLDNWRREFNKWTPEVTAVVLQGDKESRGEIM 214
Query: 124 NVIVYHATFVVLLQTGSKFFR 144
N +V A F VL+ + R
Sbjct: 215 NDVVMEAKFDVLITSYEMIIR 235
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
+ GPFLV+ P ST+ NW+REF WT ++ +V G ++
Sbjct: 171 VEGPFLVVVPKSTLDNWRREFNKWTPEVTAVVLQGDKE 208
>gi|156098278|ref|XP_001615171.1| helicase [Plasmodium vivax Sal-1]
gi|148804045|gb|EDL45444.1| helicase, putative [Plasmodium vivax]
Length = 1399
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 121/191 (63%), Gaps = 9/191 (4%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
+ VL+TT+EI+I D L D +W +IDEAHR+KN L +R L E+R+L++GTP
Sbjct: 416 YDVLLTTYEIVIKDKSALFDIDWFFLVIDEAHRIKNDKSVLSSSVRFLRSENRLLITGTP 475
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNK-------LQLLLKPMMLRR 437
L NN+ EL+SLLNFL P+ F N+E F + F K S NK L +LKP MLRR
Sbjct: 476 LHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISSNDNKQNEIITQLHTILKPFMLRR 535
Query: 438 LKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELR 497
LK +VE+S+ PK E V V ++ +QKK Y IL +N ++ T S N ++N +M+LR
Sbjct: 536 LKVEVEQSLPPKREIYVFVGMSKLQKKLYSDILSKNIDVINAMTGSKN--QMLNILMQLR 593
Query: 498 KCCIHPYLLNG 508
KCC HPYL +G
Sbjct: 594 KCCNHPYLFDG 604
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 34/124 (27%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
++ YQ+EGLNWL + + N ILADEMGLGKT+Q+++ C L
Sbjct: 317 MKPYQIEGLNWLYQLYRHRINGILADEMGLGKTLQTISLLCYLR---------------- 360
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT----------------DLNVIVYHATFVV 134
F I+ ++I P ST+ NW +E + W +LN V H + V
Sbjct: 361 --FNKNIKRKSIIICPRSTLDNWYQEIKKWCTEMKAFKYYGSKEQRRELNKNVLHTDYDV 418
Query: 135 LLQT 138
LL T
Sbjct: 419 LLTT 422
>gi|448112637|ref|XP_004202147.1| Piso0_001627 [Millerozyma farinosa CBS 7064]
gi|359465136|emb|CCE88841.1| Piso0_001627 [Millerozyma farinosa CBS 7064]
Length = 1377
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 134/213 (62%), Gaps = 11/213 (5%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
SA+R +++YE F++N K KF++L+TT+E ++ D EL W+ +DEA
Sbjct: 428 SAARKTIRDYE-FYQNKK---------LKFNILLTTYEYVLKDRSELGSIKWQFLAVDEA 477
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN L E L+ + +R+L++GTPLQNN+ EL +L NFL P +F+ + E
Sbjct: 478 HRLKNEESSLYESLKSFKVGNRLLITGTPLQNNIKELNALCNFLMPGRFNIGQEIDFETP 537
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
+ E + LQ ++P +LRRLK+DVEKS+ K E ++ VEL+++Q +YYR IL +N+S
Sbjct: 538 NREQEQYIKDLQKNIQPFILRRLKKDVEKSLPSKSERILRVELSDLQTEYYRNILTKNYS 597
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L+ G + + +L+N + EL+K HPYL +G
Sbjct: 598 ALNAGNKGSQI-SLLNVVSELKKASNHPYLFDG 629
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL K P++ + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 331 KLVKQPLFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQ------------ 378
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ L+++ ++ GP LV+ PLSTI +WQ FE W D+N + Y
Sbjct: 379 ----TVSFLSWL--IYARRQNGPHLVVVPLSTITSWQETFEKWAPDVNCVYY 424
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GP LV+ PLSTI +WQ FE W D+N + Y G
Sbjct: 394 GPHLVVVPLSTITSWQETFEKWAPDVNCVYYLG 426
>gi|213404262|ref|XP_002172903.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces japonicus
yFS275]
gi|212000950|gb|EEB06610.1| ATP-dependent DNA helicase Hrp3 [Schizosaccharomyces japonicus
yFS275]
Length = 1356
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 133/213 (62%), Gaps = 8/213 (3%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ SR M+QE+E + +++ Q +K F+VL+TT+E ++ D L + W+ IDEA
Sbjct: 456 AKSRQMIQEHEFY--DERTQKLK------FNVLLTTYEYVLKDRASLNNIKWQYMAIDEA 507
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN L E L +R+L++GTPLQNN+ EL +L++FL P +F E E
Sbjct: 508 HRLKNSESSLYETLSQFKNANRLLITGTPLQNNIKELAALVDFLMPGKFQIREEINFEAP 567
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
+ ES + LQ L+P +LRRLK+DVEKS+ K E ++ VEL++ Q +Y+ IL RN+
Sbjct: 568 DEEQESYIRNLQQHLQPYILRRLKKDVEKSLPSKSERILRVELSDSQTYWYKNILTRNYR 627
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LS+ T++ + +L+N +MEL+K HPYL G
Sbjct: 628 VLSQSTSNGSQLSLLNIVMELKKASNHPYLFPG 660
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 62/114 (54%), Gaps = 19/114 (16%)
Query: 16 WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
+ KLE+ P Y + LR +QL G+NW+ + W N ILADEMGLGKT+Q
Sbjct: 357 YRKLEQQPSYISGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQ---------- 406
Query: 76 EMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ L+++ + GPFLV+ PLST+P WQ AW D+N I Y
Sbjct: 407 ------TVAFLSYLAHSLRQ--HGPFLVVVPLSTVPAWQETLAAWAPDMNCISY 452
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
GPFLV+ PLST+P WQ AW D+N I Y G K
Sbjct: 422 GPFLVVVPLSTVPAWQETLAAWAPDMNCISYLGNAK 457
>gi|260945000|ref|XP_002616798.1| hypothetical protein CLUG_04039 [Clavispora lusitaniae ATCC 42720]
gi|238850447|gb|EEQ39911.1| hypothetical protein CLUG_04039 [Clavispora lusitaniae ATCC 42720]
Length = 1259
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 122/185 (65%), Gaps = 1/185 (0%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF++L+TT+E I+ D EL F W+ +DEAHRLKN L E L+ + +R+L++GT
Sbjct: 310 KFNILLTTYEYILKDRNELGAFKWQFLAVDEAHRLKNAESSLYESLKSFKVANRLLITGT 369
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVE 443
PLQNN+ EL +L +FL P +FS ++ + K E + LQ +KP +LRRLK+DVE
Sbjct: 370 PLQNNIKELAALCDFLMPGRFSIDQEIDFDAPDDKQEEYIKHLQSSIKPYILRRLKKDVE 429
Query: 444 KSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHP 503
KS+ K E ++ VEL+++Q +YYR I+ +N++ L+ G + + +L+N M EL+K HP
Sbjct: 430 KSLPSKTERILRVELSDVQMEYYRNIITKNYAALNAGVKGSQI-SLLNVMSELKKASNHP 488
Query: 504 YLLNG 508
YL +G
Sbjct: 489 YLFDG 493
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 63/112 (56%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL K P++ + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 194 KLNKQPLFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQ------------ 241
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ L+++ ++ GP LV+ PLSTIP WQ FE W+ D+N I Y
Sbjct: 242 ----TVAFLSWL--IYARRQNGPHLVVVPLSTIPAWQETFEKWSPDVNCIYY 287
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 27/41 (65%), Gaps = 4/41 (9%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGR---RKKL 197
GP LV+ PLSTIP WQ FE W+ D+N I Y G RKK+
Sbjct: 257 GPHLVVVPLSTIPAWQETFEKWSPDVNCIYYLGNTEARKKI 297
>gi|328868808|gb|EGG17186.1| chromo domain-containing protein [Dictyostelium fasciculatum]
Length = 1716
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 136/212 (64%), Gaps = 7/212 (3%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
++ SR++++EYE + Q+ K F+VL+TT++ I+ D L W +DE
Sbjct: 685 SAGSRDIIKEYEFY------QYQYGKKKLNFNVLLTTYDFILKDKQVLGSIKWEYLAVDE 738
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKN L E L+ +R+L++GTPLQN++ EL++LLNFL P +F + + F ++
Sbjct: 739 AHRLKNNESMLHEVLKFFKTGNRLLVTGTPLQNSMKELWNLLNFLMPNKFHSLKDFQDQW 798
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
LK + ++ +L LKP +LRR+K++VEKS+ K E ++ V+L+ +QKKYYR IL++NF
Sbjct: 799 SDLKEKDQIAELHNELKPHLLRRIKKEVEKSLPAKTERILRVDLSPLQKKYYRLILKKNF 858
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
L+KG +L+N ++EL+K C HPYL
Sbjct: 859 QELNKGVKGEKT-SLLNIVVELKKTCNHPYLF 889
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 21/116 (18%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
K P + + LR YQ++GLNWL+ SWFN N ILADEMG
Sbjct: 589 KFNTQPDWISAGKLRDYQMDGLNWLIHSWFNNTNVILADEMG------------------ 630
Query: 78 GLGKTIQSLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
LGKTIQ+++F+ ++ + GP+LV+ PLSTI NWQREF W +N+IVY +
Sbjct: 631 -LGKTIQTISFISYLYNVQQMSGPYLVVVPLSTIENWQREFAKWAPSMNLIVYTGS 685
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
+ GP+LV+ PLSTI NWQREF W +N+IVY G
Sbjct: 650 MSGPYLVVVPLSTIENWQREFAKWAPSMNLIVYTG 684
>gi|302802510|ref|XP_002983009.1| hypothetical protein SELMODRAFT_117536 [Selaginella moellendorffii]
gi|300149162|gb|EFJ15818.1| hypothetical protein SELMODRAFT_117536 [Selaginella moellendorffii]
Length = 975
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 123/188 (65%), Gaps = 6/188 (3%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + LK F+WR IIDEAHR+KN L + +R+ R+L++GT
Sbjct: 209 KFDVCVTSFEMAIKEKAALKKFSWRYIIIDEAHRIKNEKSILAKTMRIFSTNFRLLITGT 268
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF---GQLKTESEVNKLQLLLKPMMLRRLKE 440
PLQNN++EL++LLNFL P+ FS+ E F F G+ + V +L +L+P +LRRLK
Sbjct: 269 PLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKS 328
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
DVEK + PK+ET+++V ++ +QK YY +L+++ ++ G L+N M+L+KCC
Sbjct: 329 DVEKGLPPKKETILKVGMSKMQKHYYGSLLQKDLDAINTG---GERRRLLNIAMQLKKCC 385
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 386 NHPYLFQG 393
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 54/103 (52%), Gaps = 19/103 (18%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 109 VMRDYQLAGLNWLIKLYENGINGILADEMGLGKTLQ----------------TISLLGYL 152
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHAT 131
K I GP +V+AP ST+ NW E + L + +H T
Sbjct: 153 HQYRK--ITGPHMVVAPKSTLGNWMNEIRKFCPILRAVKFHGT 193
>gi|302764218|ref|XP_002965530.1| hypothetical protein SELMODRAFT_84809 [Selaginella moellendorffii]
gi|300166344|gb|EFJ32950.1| hypothetical protein SELMODRAFT_84809 [Selaginella moellendorffii]
Length = 971
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 123/188 (65%), Gaps = 6/188 (3%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + LK F+WR IIDEAHR+KN L + +R+ R+L++GT
Sbjct: 209 KFDVCVTSFEMAIKEKAALKKFSWRYIIIDEAHRIKNEKSILAKTMRIFSTNFRLLITGT 268
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF---GQLKTESEVNKLQLLLKPMMLRRLKE 440
PLQNN++EL++LLNFL P+ FS+ E F F G+ + V +L +L+P +LRRLK
Sbjct: 269 PLQNNLHELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKS 328
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
DVEK + PK+ET+++V ++ +QK YY +L+++ ++ G L+N M+L+KCC
Sbjct: 329 DVEKGLPPKKETILKVGMSKMQKHYYGSLLQKDLDAINTG---GERRRLLNIAMQLKKCC 385
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 386 NHPYLFQG 393
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 54/103 (52%), Gaps = 19/103 (18%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 109 VMRDYQLAGLNWLIKLYENGINGILADEMGLGKTLQ----------------TISLLGYL 152
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHAT 131
K I GP +V+AP ST+ NW E + L + +H T
Sbjct: 153 HQYRK--ITGPHMVVAPKSTLGNWMNEIRKFCPILRAVKFHGT 193
>gi|449445043|ref|XP_004140283.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Cucumis sativus]
Length = 1777
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 138/217 (63%), Gaps = 10/217 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR + Q++E F N + KF+ L+TT+E+++ D L W ++DEAH
Sbjct: 730 ASREVCQQHE--FENKRTGRP-----IKFNALLTTYEVVLKDRAVLSKIKWNYLMVDEAH 782
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN +L L ++++L++GTPLQN+V EL++LL+FL+P +F + + F+ +
Sbjct: 783 RLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDFIHNYKN 842
Query: 417 LKT--ESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + E E+ L + LKP +LRR+ +DVEKS+ PK E ++ VE++ +QK+YY+ ILERNF
Sbjct: 843 LSSFDEIELANLHMELKPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 902
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 903 HDLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESADH 938
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 68/115 (59%), Gaps = 19/115 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL++ P + LR YQLEGLN+L+ SW N N ILADEMGLGKT+QS++ +
Sbjct: 632 KLDEQPEWLMGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSM-------L 684
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHAT 131
G + Q I GPFLV+ PLST+ NW +EF W D+NVIVY T
Sbjct: 685 GFLQNAQQ-----------IYGPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGT 728
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
I GPFLV+ PLST+ NW +EF W D+NVIVY G R
Sbjct: 693 IYGPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGTR 729
>gi|307776522|pdb|3MWY|W Chain W, Crystal Structure Of The Chromodomain-atpase Portion Of
The Yeast Chd1 Chromatin Remodeler
Length = 800
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 131/210 (62%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++EYE + N K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 323 SRDTIREYEFY----TNPRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHR 378
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 379 LKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDE 438
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E ++ L ++P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+S L
Sbjct: 439 EQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSAL 498
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ G + +L+N M EL+K HPYL +
Sbjct: 499 TAGAKGGHF-SLLNIMNELKKASNHPYLFD 527
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + LR +QL G+NW+ F W G N ILADEMGLGKT+Q
Sbjct: 224 KLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQ------------ 271
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ +F GP +++ PLST+P W FE W DLN I Y
Sbjct: 272 ----TVAFISWL--IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICY 317
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
+F GP +++ PLST+P W FE W DLN I Y G +K
Sbjct: 280 IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQK 322
>gi|281211051|gb|EFA85217.1| myb domain-containing protein [Polysphondylium pallidum PN500]
Length = 1186
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 132/192 (68%), Gaps = 9/192 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +TT+E++I D K F+WR IIDEAHR+KN N L +G+RL + + R+L++GT
Sbjct: 289 KFDVCVTTYEMVIKDKSVFKKFSWRYIIIDEAHRIKNENSVLSKGVRLFNSQFRLLITGT 348
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE---VNKLQLLLKPMMLRRLKE 440
PLQNN++EL++LLNFL P FS+++ F F +TE++ ++KL +L+P +LRRLK
Sbjct: 349 PLQNNLHELWALLNFLLPDVFSSSDDFDRWFNLEQTENQQEVIDKLHKVLRPFLLRRLKS 408
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS----KGTTSANVPNLMNTMMEL 496
+VEKS+ PK+E + V L+ +Q+++Y+ +L ++F L KG S+ L+N M+L
Sbjct: 409 EVEKSLPPKKEIKLYVGLSAMQREWYKRLLSKDFEALHGVGVKG--SSGRVKLLNICMQL 466
Query: 497 RKCCIHPYLLNG 508
RK C HPYL +G
Sbjct: 467 RKACNHPYLFDG 478
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 35/110 (31%)
Query: 22 SPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGK 81
+P Y +R YQ+ GLNWL+ + E G+ N ILADEMGLGK
Sbjct: 197 NPPYIKHGVMRDYQIYGLNWLIQLY----------ERGI---------NGILADEMGLGK 237
Query: 82 TIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHA 130
T+ GP L+IAP ST+ W +EF+ W L V+ +H
Sbjct: 238 TL---------------GPHLIIAPKSTLSGWCKEFKNWCPSLRVVKFHG 272
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 161 GPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRKKLSRRDKERL 205
GP L+IAP ST+ W +EF+ W L V+ +HG +++ + E+L
Sbjct: 240 GPHLIIAPKSTLSGWCKEFKNWCPSLRVVKFHGEKQERQKIKTEQL 285
>gi|449480963|ref|XP_004156041.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 2-like [Cucumis sativus]
Length = 1761
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 138/217 (63%), Gaps = 10/217 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR + Q++E F N + KF+ L+TT+E+++ D L W ++DEAH
Sbjct: 714 ASREVCQQHE--FXNKRTGRP-----IKFNALLTTYEVVLKDRAVLSKIKWNYLMVDEAH 766
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN +L L ++++L++GTPLQN+V EL++LL+FL+P +F + + F+ +
Sbjct: 767 RLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDFIHNYKN 826
Query: 417 LKT--ESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
L + E E+ L + LKP +LRR+ +DVEKS+ PK E ++ VE++ +QK+YY+ ILERNF
Sbjct: 827 LSSFDEIELANLHMELKPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNF 886
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L+KG V +L+N ++EL+KCC HP+L +
Sbjct: 887 HDLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESADH 922
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 68/115 (59%), Gaps = 19/115 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL++ P + LR YQLEGLN+L+ SW N N ILADEMGLGKT+QS++ +
Sbjct: 616 KLDEQPEWLMGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSM-------L 668
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHAT 131
G + Q I GPFLV+ PLST+ NW +EF W D+NVIVY T
Sbjct: 669 GFLQNAQQ-----------IYGPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGT 712
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
I GPFLV+ PLST+ NW +EF W D+NVIVY G R
Sbjct: 677 IYGPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGTR 713
>gi|346974389|gb|EGY17841.1| ISWI chromatin-remodeling complex ATPase ISW2 [Verticillium dahliae
VdLs.17]
Length = 1119
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 134/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ ++ Q I E+ + KF V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 267 KEERQQLINERLVEEKFDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLAQV 326
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKL 426
+RL + +R+L++GTPLQNN++EL++LLNFL P F ++EAF F GQ + + V +L
Sbjct: 327 IRLFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDRDQDTVVQQL 386
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSAN 485
+L+P +LRR+K DVEKS+ PK+E V + ++ +Q K+Y+ ILE++ ++ G +
Sbjct: 387 HRVLRPFLLRRVKADVEKSLLPKKEVNVYLGMSEMQVKWYKKILEKDIDAVNGAGGKRES 446
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 447 KTRLLNIVMQLRKCCNHPYLFEG 469
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 58/102 (56%), Gaps = 19/102 (18%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 183 MRDYQVAGLNWLISLHENGISGILADEMGLGKTLQ----------------TISFLGYLR 226
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
+ GI GP LVI P ST+ NW+REF WT ++NV+V
Sbjct: 227 HIM--GITGPHLVIVPKSTLDNWKREFAKWTPEVNVLVLQGA 266
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP LVI P ST+ NW+REF WT ++NV+V G +++ + ERL
Sbjct: 230 GITGPHLVIVPKSTLDNWKREFAKWTPEVNVLVLQGAKEERQQLINERL 278
>gi|67606806|ref|XP_666775.1| chromatin remodelling complex protein SNF2L [Cryptosporidium
hominis TU502]
gi|54657830|gb|EAL36543.1| chromatin remodelling complex protein SNF2L [Cryptosporidium
hominis]
Length = 1292
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 125/190 (65%), Gaps = 8/190 (4%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
++V +TTFE+ I + L+ +W+ CI+DEAHR+KN L E +RLL ++R+L++GTP
Sbjct: 310 YNVCLTTFEMAIKEKWRLQKISWKYCILDEAHRIKNEKSLLSEVVRLLKSKNRLLITGTP 369
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE------VNKLQLLLKPMMLRRL 438
LQNN+ EL+SLLNFL P FS++E F S F K ES+ + L +L+P MLRRL
Sbjct: 370 LQNNLRELWSLLNFLMPNLFSSSEDFESLFDFSKLESDDQQKCVIKTLHQILRPFMLRRL 429
Query: 439 KEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRK 498
K DVE+ + PK E V + L+ +QKK Y +L RN L+ + S+N ++N +M+LRK
Sbjct: 430 KADVERDLPPKRELYVYIGLSKLQKKIYSELLTRNLDVLN--SASSNKTQMLNLLMQLRK 487
Query: 499 CCIHPYLLNG 508
C HPYL +G
Sbjct: 488 TCNHPYLFDG 497
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 60/119 (50%), Gaps = 26/119 (21%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
++ YQLEGLNW+ + + N ILADEMGLGKT+Q TI L F+
Sbjct: 164 MKFYQLEGLNWMFQLYKHNINGILADEMGLGKTLQ----------------TISILGFLK 207
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT-------FVVLLQTGSK 141
+ FK + GP +++ P ST+ NW E + W L V+ H F LL GSK
Sbjct: 208 STFK--VEGPHIILTPRSTLDNWFCELKRWCPSLRVVKLHGDRQLRDEIFSSLLFPGSK 264
>gi|156043545|ref|XP_001588329.1| hypothetical protein SS1G_10776 [Sclerotinia sclerotiorum 1980]
gi|154695163|gb|EDN94901.1| hypothetical protein SS1G_10776 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1086
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 134/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++++N I E+ + KF V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 274 KDERNTLINERLIDEKFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQV 333
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG--QLKTESEVNKL 426
+RL + +R+L++GTPLQNN++EL++LLNFL P F + EAF F Q ++ V +L
Sbjct: 334 IRLFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDAEAFDQWFSGQQEDQDTVVQQL 393
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSAN 485
+L+P +LRR+K DVEKS+ PK+E + + ++++Q K+Y+ ILE++ ++ G +
Sbjct: 394 HRVLRPFLLRRVKADVEKSLLPKKEINLYIGMSDMQVKWYKKILEKDIDAVNGAGGKRES 453
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 454 KTRLLNIVMQLRKCCNHPYLFEG 476
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 19/102 (18%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q+++ +G + I +T
Sbjct: 190 MRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQTISF-------LGYLRHIMDIT--- 239
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
GP L++ P ST+ NW+REF WT ++NV+V
Sbjct: 240 --------GPHLIVVPKSTLDNWKREFARWTPEVNVLVLQGA 273
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
I GP L++ P ST+ NW+REF WT ++NV+V G + + + ERL
Sbjct: 238 ITGPHLIVVPKSTLDNWKREFARWTPEVNVLVLQGAKDERNTLINERL 285
>gi|66359998|ref|XP_627177.1| SNF2L ortholog with a SWI/SNF2 like ATpase and a Myb domain
[Cryptosporidium parvum Iowa II]
gi|46228591|gb|EAK89461.1| SNF2L ortholog with a SWI/SNF2 like ATpase and a Myb domain
[Cryptosporidium parvum Iowa II]
Length = 1308
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 125/190 (65%), Gaps = 8/190 (4%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
++V +TTFE+ I + L+ +W+ CI+DEAHR+KN L E +RLL ++R+L++GTP
Sbjct: 310 YNVCLTTFEMAIKEKWRLQKISWKYCILDEAHRIKNEKSLLSEVVRLLKSKNRLLITGTP 369
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE------VNKLQLLLKPMMLRRL 438
LQNN+ EL+SLLNFL P FS++E F S F K ES+ + L +L+P MLRRL
Sbjct: 370 LQNNLRELWSLLNFLMPNLFSSSEDFESLFDFSKLESDDQQKCVIKTLHQILRPFMLRRL 429
Query: 439 KEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRK 498
K DVE+ + PK E V + L+ +QKK Y +L RN L+ + S+N ++N +M+LRK
Sbjct: 430 KADVERDLPPKRELYVYIGLSKLQKKIYSELLTRNLDVLN--SASSNKTQMLNLLMQLRK 487
Query: 499 CCIHPYLLNG 508
C HPYL +G
Sbjct: 488 TCNHPYLFDG 497
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 60/119 (50%), Gaps = 26/119 (21%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
++ YQLEGLNW+ + + N ILADEMGLGKT+Q TI L F+
Sbjct: 164 MKFYQLEGLNWMFQLYKHNINGILADEMGLGKTLQ----------------TISILGFLK 207
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT-------FVVLLQTGSK 141
+ FK + GP +++ P ST+ NW E + W L V+ H F LL GSK
Sbjct: 208 STFK--VEGPHIILTPRSTLDNWFCELKRWCPSLRVVKLHGDRQLRDEIFSSLLFPGSK 264
>gi|330845465|ref|XP_003294605.1| hypothetical protein DICPUDRAFT_4822 [Dictyostelium purpureum]
gi|325074901|gb|EGC28868.1| hypothetical protein DICPUDRAFT_4822 [Dictyostelium purpureum]
Length = 1004
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 129/192 (67%), Gaps = 9/192 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V ITT+E+ I + K F+WR IIDEAHR+KN N L +G+RL + + R+L++GT
Sbjct: 257 KFDVCITTYEVAIREKAAFKKFSWRYIIIDEAHRIKNENSVLSKGVRLFNSQFRLLITGT 316
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE---VNKLQLLLKPMMLRRLKE 440
PLQNN++EL+SLLNFL P FS++E F F TE++ ++KL +L+P +LRRLK
Sbjct: 317 PLQNNLHELWSLLNFLLPDVFSSSEDFDKWFDLANTENQQEVIDKLHKVLRPFLLRRLKS 376
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL----SKGTTSANVPNLMNTMMEL 496
+VEKS+ PK+E + V L+++QK +Y+ +L ++ + SKG A L+N M+L
Sbjct: 377 EVEKSLPPKKEIKLFVGLSSMQKDWYKRLLTKDIEAVMNPGSKG--QAARVRLLNICMQL 434
Query: 497 RKCCIHPYLLNG 508
RK C HPYL +G
Sbjct: 435 RKACNHPYLFDG 446
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 60/111 (54%), Gaps = 19/111 (17%)
Query: 22 SPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGK 81
SP Y T+R YQ+ GLNWL+ + G N ILADEMGLGKT+Q
Sbjct: 149 SPPYIKSGTMRDYQVNGLNWLIQLYERGINGILADEMGLGKTLQ---------------- 192
Query: 82 TIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHAT 131
TI L ++ GIRGP L+IAP ST+ W +EF W L V+ +H +
Sbjct: 193 TISLLGYLSEY--KGIRGPHLIIAPKSTLSGWTKEFAKWCPFLRVVKFHGS 241
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHGRRKK 196
GIRGP L+IAP ST+ W +EF W L V+ +HG +++
Sbjct: 205 GIRGPHLIIAPKSTLSGWTKEFAKWCPFLRVVKFHGSKEE 244
>gi|297802844|ref|XP_002869306.1| hypothetical protein ARALYDRAFT_328538 [Arabidopsis lyrata subsp.
lyrata]
gi|297315142|gb|EFH45565.1| hypothetical protein ARALYDRAFT_328538 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 133/213 (62%), Gaps = 13/213 (6%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
S +R+++ E+E +F + KF VL+T++E+I D LK W I+DE
Sbjct: 304 TSEARDVIWEHEFYFPKGRK--------IKFDVLLTSYEMINQDTSVLKPIKWTCMIVDE 355
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
HRLKN++ KL L +HRVLL+GTPLQNN++ELF L++FL+ +F++ E F EF
Sbjct: 356 GHRLKNKDSKLYSSLNQFTSKHRVLLTGTPLQNNLDELFVLMHFLDAVKFASMENFQKEF 415
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKS-IAPKEETVVEVELTNIQKKYYRGILERN 473
+ E ++++L +L P +LRRLK+DV K + PK+E ++ V+L++ QK+ Y+ ++ N
Sbjct: 416 KDINQEKQISRLHQMLAPHLLRRLKKDVLKDKMPPKKELILRVDLSSQQKEVYKAVITNN 475
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ L+K + + N +M+LRK C HPYLL
Sbjct: 476 YQVLTKKRGA----KISNVLMDLRKVCSHPYLL 504
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 60/103 (58%), Gaps = 21/103 (20%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
TL YQLEGL +L SW G N ILADEMGL GKTIQS+ F+
Sbjct: 222 TLHTYQLEGLTFLKHSWSKGTNVILADEMGL-------------------GKTIQSIAFL 262
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
++F+ + P LV+APLST+ NW+REF W +NV++Y T
Sbjct: 263 ASLFEENL-SPHLVVAPLSTLRNWEREFATWAPHMNVVMYTGT 304
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++F+ + P LV+APLST+ NW+REF W +NV++Y G
Sbjct: 261 FLASLFEENL-SPHLVVAPLSTLRNWEREFATWAPHMNVVMYTG 303
>gi|357125031|ref|XP_003564199.1| PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like
[Brachypodium distachyon]
Length = 1334
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 139/224 (62%), Gaps = 13/224 (5%)
Query: 295 ASASRNMLQEYELFF-----------RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELK 343
+SA+R +++YE +F ++ + K++ KF VL+T++E+I D LK
Sbjct: 360 SSAARENIRKYEFYFPKDKPKKLKKKKSSSSNDEKKQSRIKFDVLLTSYEMINMDSAVLK 419
Query: 344 DFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQ 403
W I+DE HRLKN++ KL L+ +HRVLL+GTP+QNN++ELF L++FLE +
Sbjct: 420 TIEWECMIVDEGHRLKNKDSKLFGLLKDYPTQHRVLLTGTPVQNNLDELFMLMHFLEGET 479
Query: 404 FSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQK 463
F + EF + + +V KL +LKP +LRR K+DV K + PK+E ++ VELT+ QK
Sbjct: 480 FGSIADLQEEFKDINQDKQVEKLHGMLKPHLLRRFKKDVMKDLPPKKELILRVELTSKQK 539
Query: 464 KYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+YY+ IL +N++ LS+ +L+N +MELRK C H ++ +
Sbjct: 540 EYYKAILTKNYAVLSR--RGGGHVSLINVVMELRKLCCHGFMTD 581
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 21/125 (16%)
Query: 8 KKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSL 67
K K + ++ +P + + TL YQLEGLN+L +SW S+
Sbjct: 256 KSKSANREMRHVDGTPEFLSGGTLHPYQLEGLNFLRYSW-------------------SI 296
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVI 126
+ IL DEMGLGKTIQS+ F+ +V + GP LV+APLST+ NW+REF W +NV+
Sbjct: 297 NKRVILGDEMGLGKTIQSIAFLASVSEDNF-GPHLVVAPLSTLRNWEREFATWAPQMNVV 355
Query: 127 VYHAT 131
+Y +
Sbjct: 356 MYSGS 360
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GP LV+APLST+ NW+REF W +NV++Y G
Sbjct: 327 GPHLVVAPLSTLRNWEREFATWAPQMNVVMYSG 359
>gi|83286649|ref|XP_730253.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23489925|gb|EAA21818.1| SNF2 family N-terminal domain, putative [Plasmodium yoelii yoelii]
Length = 1350
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 121/191 (63%), Gaps = 9/191 (4%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
+ VL+TT+EI+I D L D +W +IDEAHR+KN L +R L E+R+L++GTP
Sbjct: 343 YDVLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNDKSVLSSSVRFLKSENRLLITGTP 402
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNK-------LQLLLKPMMLRR 437
L NN+ EL+SLLNFL P+ F N+E F + F K + NK L +LKP MLRR
Sbjct: 403 LHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSEIITQLHTILKPFMLRR 462
Query: 438 LKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELR 497
LK +VE+S+ PK E + V ++ +QKK Y IL +N ++ T S N ++N +M+LR
Sbjct: 463 LKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVINAMTGSKN--QMLNILMQLR 520
Query: 498 KCCIHPYLLNG 508
KCC HPYL +G
Sbjct: 521 KCCNHPYLFDG 531
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 34/125 (27%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
T++ YQ+EGLNWL + + N ILADEMGLGKT+Q+++ C L
Sbjct: 243 TMKPYQIEGLNWLYQLYRHKINGILADEMGLGKTLQTISLLCYLR--------------- 287
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAW----------------TDLNVIVYHATFV 133
F I+ ++I P ST+ NW E + W +LN V H+ +
Sbjct: 288 ---FNKNIKRKNIIICPRSTLDNWYEEIKKWCSEMKPFKYYGSKEQRKELNKTVLHSDYD 344
Query: 134 VLLQT 138
VLL T
Sbjct: 345 VLLTT 349
>gi|68059048|ref|XP_671503.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56487742|emb|CAH95874.1| hypothetical protein PB000382.01.0 [Plasmodium berghei]
Length = 324
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 121/191 (63%), Gaps = 9/191 (4%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
+ VL+TT+EI+I D L D +W +IDEAHR+KN L +R L E+R+L++GTP
Sbjct: 54 YDVLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNDKSVLSSSVRFLKSENRLLITGTP 113
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNK-------LQLLLKPMMLRR 437
L NN+ EL+SLLNFL P+ F N+E F + F K + NK L +LKP MLRR
Sbjct: 114 LHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSEIITQLHTILKPFMLRR 173
Query: 438 LKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELR 497
LK +VE+S+ PK E + V ++ +QKK Y IL +N ++ T S N ++N +M+LR
Sbjct: 174 LKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVINAMTGSKN--QMLNILMQLR 231
Query: 498 KCCIHPYLLNG 508
KCC HPYL +G
Sbjct: 232 KCCNHPYLFDG 242
>gi|189192520|ref|XP_001932599.1| ISWI chromatin-remodeling complex ATPase ISW2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187974205|gb|EDU41704.1| ISWI chromatin-remodeling complex ATPase ISW2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1002
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 133/203 (65%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++D+ IKE+ + F V IT++E+I+ + LK F W IIDEAHR+KN + L +
Sbjct: 284 KDDRADLIKERLVPDSFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNESSSLAQM 343
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R + R+L++GTPLQNN++EL++LLNFL P F ++ AF F Q +S+ V +L
Sbjct: 344 VRAFNSRSRLLITGTPLQNNLHELWALLNFLLPDVFGDSAAFDDWFSQQNADSDAIVKQL 403
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANV 486
+L+P +LRR+K DVEKS+ PK+E + V ++++Q ++Y+ ILE++ ++ G +
Sbjct: 404 HKVLRPFLLRRVKADVEKSLLPKKEINLYVGMSDMQVQWYKKILEKDIDAVNGGAGNKES 463
Query: 487 PN-LMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 464 KTRLLNIVMQLRKCCNHPYLFEG 486
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 62/108 (57%), Gaps = 19/108 (17%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + T+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q+++
Sbjct: 190 ESPGFIKGGTMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQTIS------------ 237
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIV 127
I L ++ GI GP LV P ST+ NW+REF W ++NV+V
Sbjct: 238 -FIGYLRYI-----AGITGPHLVAVPKSTLDNWKREFAKWCPEVNVLV 279
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRKKLSRRDKERL 205
+ GI GP LV P ST+ NW+REF W ++NV+V G + + KERL
Sbjct: 244 YIAGITGPHLVAVPKSTLDNWKREFAKWCPEVNVLVLQGNKDDRADLIKERL 295
>gi|448115947|ref|XP_004202943.1| Piso0_001812 [Millerozyma farinosa CBS 7064]
gi|359383811|emb|CCE79727.1| Piso0_001812 [Millerozyma farinosa CBS 7064]
Length = 1023
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 129/191 (67%), Gaps = 7/191 (3%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V+IT++EI+I + + F W IIDEAHR+KN L + +R+ H ++R+L++GTP
Sbjct: 247 FDVVITSYEIVIKEKAAFRKFAWEYIIIDEAHRIKNEESLLSQIIRVFHSKNRLLITGTP 306
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE------VNKLQLLLKPMMLRRL 438
LQNN++EL++LLNFL P F +++AF S F TE E +++L +LKP +LRR+
Sbjct: 307 LQNNLHELWALLNFLLPDVFGDSDAFDSWFKGSGTEEEGNSDEIISQLHKVLKPFLLRRV 366
Query: 439 KEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSANVPNLMNTMMELR 497
K DVEKS+ PK+E V ++++++QK++Y+ ILE++ ++ + L+N +M+LR
Sbjct: 367 KSDVEKSLLPKKELNVYLKMSDMQKRWYQKILEKDIDAVNGANGKKESKTRLLNIVMQLR 426
Query: 498 KCCIHPYLLNG 508
KCC HPYL G
Sbjct: 427 KCCNHPYLFEG 437
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 20/108 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + N LR+YQ++GLNWL+ + N + ILADEMGLGKT+Q+++ +G
Sbjct: 138 ESPGFIN-GELRSYQIQGLNWLISLYENNLSGILADEMGLGKTLQTISF-------LGYL 189
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
+ I++ I GP ++I P ST+ NW REF WT D+NV+V
Sbjct: 190 RYIRN-----------IHGPHIIIVPKSTLDNWAREFARWTSDVNVLV 226
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
I GP ++I P ST+ NW REF WT D+NV+V G ++
Sbjct: 195 IHGPHIIIVPKSTLDNWAREFARWTSDVNVLVLQGDKE 232
>gi|240281984|gb|EER45487.1| chromatin remodeling complex ATPase chain ISW1 [Ajellomyces
capsulatus H143]
Length = 1051
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 137/204 (67%), Gaps = 6/204 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++D+++ I E+ + KF V IT++E+++ + LK F W +IDEAHR+KN L +
Sbjct: 293 KDDRHKLINERLVDEKFDVCITSYEMVLREKSHLKKFAWEYIVIDEAHRIKNEESSLAQI 352
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ H +R+L++GTPLQNN++EL++LLNFL P F +++AF F + + + V +L
Sbjct: 353 IRVFHSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDAFDQWFSNQEADQDTVVQQL 412
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSA 484
+L+P +LRR+K DVEKS+ PK+E + V ++++Q K+Y+ ILE++ + ++G +
Sbjct: 413 HRVLRPFLLRRVKSDVEKSLLPKKEMNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRES 472
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 473 KT-RLLNIVMQLRKCCNHPYLFEG 495
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 60/112 (53%), Gaps = 19/112 (16%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 199 ESPAFVKGGEMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQ--------------- 243
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
TI L ++ + GI GP L+ P ST+ NW REF WT D+NV+V
Sbjct: 244 -TIAFLGYLRHI--CGITGPHLITVPKSTLDNWHREFSKWTPDVNVLVLQGA 292
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP L+ P ST+ NW REF WT D+NV+V G + + ERL
Sbjct: 256 GITGPHLITVPKSTLDNWHREFSKWTPDVNVLVLQGAKDDRHKLINERL 304
>gi|347829336|emb|CCD45033.1| similar to chromatin remodelling complex ATPase chain ISW1
[Botryotinia fuckeliana]
Length = 1130
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 133/203 (65%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ ++N I E+ + KF V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 270 KEERNNLINERLIDEKFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQV 329
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG--QLKTESEVNKL 426
+RL + +R+L++GTPLQNN++EL++LLNFL P F + EAF F Q ++ V +L
Sbjct: 330 IRLFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDAEAFDQWFSGQQEDQDTVVQQL 389
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSAN 485
+L+P +LRR+K DVEKS+ PK+E + + ++++Q K+Y+ ILE++ ++ G +
Sbjct: 390 HRVLRPFLLRRVKADVEKSLLPKKEVNLYIGMSDMQVKWYKKILEKDIDAVNGAGGKRES 449
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 450 KTRLLNIVMQLRKCCNHPYLFEG 472
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 19/102 (18%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 186 MRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQ----------------TISFLGYLR 229
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
+ I GP L++ P ST+ NW+REF WT ++NV+V
Sbjct: 230 HIMD--ITGPHLIVVPKSTLDNWKREFIRWTPEVNVLVLQGA 269
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
I GP L++ P ST+ NW+REF WT ++NV+V G +++ + ERL
Sbjct: 234 ITGPHLIVVPKSTLDNWKREFIRWTPEVNVLVLQGAKEERNNLINERL 281
>gi|449281262|gb|EMC88383.1| Chromodomain-helicase-DNA-binding protein 2 [Columba livia]
Length = 1719
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 132/209 (63%), Gaps = 10/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRNM++EYE K KF+ LITT+EI++ D L NW +DEAHR
Sbjct: 568 SRNMIREYEWIHSQSKR--------LKFNALITTYEILLKDKAVLGSINWAFLGVDEAHR 619
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L HR+L++GTPLQN++ EL+SLL+F+ P++F E F + G+
Sbjct: 620 LKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKG 679
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E+ L +L+P +LRR+K+DVEKS+ K E ++ VE++ +QK+YY+ IL RN+ L
Sbjct: 680 R-ENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKAL 738
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
SKG T + +N +MEL+KCC H YL+
Sbjct: 739 SKG-TRGSTSGFLNIVMELKKCCNHCYLI 766
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 16 WVKLEKSPVYKNDNTL--RAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+V L+K P Y L R YQLEGLNWL SW + ILADEMGLGKTIQ
Sbjct: 465 FVTLKKQPSYIGSENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQ-------- 516
Query: 74 ADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
TI L+++ + + GPFLV+ PLST+ +WQREFE W ++NV+VY
Sbjct: 517 --------TISFLSYL--FHQHQLYGPFLVVVPLSTLTSWQREFEVWAPEINVVVY 562
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFLV+ PLST+ +WQREFE W ++NV+VY G
Sbjct: 532 GPFLVVVPLSTLTSWQREFEVWAPEINVVVYIG 564
>gi|343429407|emb|CBQ72980.1| probable ISW2-ATPase component of a two subunit chromatin
remodeling complex [Sporisorium reilianum SRZ2]
Length = 1110
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 123/188 (65%), Gaps = 4/188 (2%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F VLITT+E+ + + LK +W +IDEAHR+KN + L + +R + R+L++GTP
Sbjct: 329 FDVLITTYEMCLREKSALKKLSWEYIVIDEAHRIKNVDSMLSQIVRAFNSRSRLLITGTP 388
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEF---GQLKTESEVNKLQLLLKPMMLRRLKED 441
LQNN+ EL+SLLNFL P FSN+E F S F G + V +L +L+P +LRR+K D
Sbjct: 389 LQNNLMELWSLLNFLLPDVFSNSEDFESWFKGKGDENQDQVVQQLHKVLRPFLLRRVKAD 448
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSANVPNLMNTMMELRKCC 500
VEKS+ PK+E + V LT +Q+K+Y+ ILE++ ++ G L+N +M+LRKCC
Sbjct: 449 VEKSLLPKKEINIFVGLTEMQRKWYKSILEKDIDAVNGGVGKKEGKTRLLNIVMQLRKCC 508
Query: 501 IHPYLLNG 508
HPYL +G
Sbjct: 509 NHPYLFDG 516
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 19/112 (16%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP Y +R YQ++GLNW++ + NG N ILADEMGLGKT+Q+++ L D
Sbjct: 219 ESPAYVKGGKMRDYQVQGLNWMISLYHNGINGILADEMGLGKTLQTISFLGYLRD----- 273
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
F D G LV+ P ST+ NW REF W NV+ +
Sbjct: 274 -------FRDTP------GFHLVVVPKSTLDNWYREFHRWVPGFNVVTLKGS 312
>gi|154091326|gb|ABS57461.1| chromodomain helicase DNA binding protein 4-like protein [Cyclorana
alboguttata]
Length = 184
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 342 LKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEP 401
L +W ++DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P
Sbjct: 4 LGSIDWTCLVVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTP 63
Query: 402 QQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNI 461
++F+N E F+ EF + E ++ KL +L P MLRRLK DV KS+ K E +V VEL+ +
Sbjct: 64 ERFNNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKSMPSKTELIVRVELSPM 123
Query: 462 QKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYL 505
QKKYY+ IL RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 124 QKKYYKFILTRNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYL 166
>gi|255079182|ref|XP_002503171.1| SNF2 super family [Micromonas sp. RCC299]
gi|226518437|gb|ACO64429.1| SNF2 super family [Micromonas sp. RCC299]
Length = 1026
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 128/188 (68%), Gaps = 8/188 (4%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V +T++E++I + LK F+WR IIDEAHR+KN N +L + +R+ +R+L++GTP
Sbjct: 267 FDVCVTSYEMVIKEKNALKKFHWRYIIIDEAHRIKNENSRLSKVMRMFACNNRLLITGTP 326
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLKE 440
LQNN++EL++LLNFL P+ F + F FG TE + V +L +L+P +LRRLK
Sbjct: 327 LQNNLHELWALLNFLLPEVFGDAGQFEEWFG-TGTEGDNTEVVQQLHKVLRPFLLRRLKA 385
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
+VEK++ PK+E +++V ++ +QK+YY+ L+++ ++ G + L+N +M+LRKCC
Sbjct: 386 EVEKNLPPKKEMILKVGMSEMQKEYYKRALQKDIQVVNSG---GDRSRLLNMVMQLRKCC 442
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 443 NHPYLFQG 450
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 18/90 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNW++ + +G N ILADEMGLGKT+Q TI L ++
Sbjct: 166 MREYQLAGLNWMIRLFDHGINGILADEMGLGKTLQ----------------TISLLGYLS 209
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAW 120
GI GP +V+ P ST+ NW EF+ W
Sbjct: 210 EY--RGITGPHMVVVPKSTLGNWMNEFKRW 237
>gi|323337858|gb|EGA79098.1| Chd1p [Saccharomyces cerevisiae Vin13]
Length = 1329
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 133/210 (63%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++EYE F+ N + + K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 462 SRDTIREYE-FYTNPRAKGXK---TMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHR 517
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 518 LKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDE 577
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E ++ L ++P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+S L
Sbjct: 578 EQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSAL 637
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ G + +L+N M EL+K HPYL +
Sbjct: 638 TAGAKGGHF-SLLNIMNELKKASNHPYLFD 666
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + LR +QL G+NW+ F W G N ILADEMGLGKT+Q
Sbjct: 363 KLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQ------------ 410
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ +F GP +++ PLST+P W FE W DLN I Y
Sbjct: 411 ----TVAFISWL--IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICY 456
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
+F GP +++ PLST+P W FE W DLN I Y G +K
Sbjct: 419 IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQK 461
>gi|365987878|ref|XP_003670770.1| hypothetical protein NDAI_0F02090 [Naumovozyma dairenensis CBS 421]
gi|343769541|emb|CCD25527.1| hypothetical protein NDAI_0F02090 [Naumovozyma dairenensis CBS 421]
Length = 1084
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 136/205 (66%), Gaps = 6/205 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++++NQ +KE+ L KF V+I ++EI+I + + F+W+ IIDEAHR+KN L +
Sbjct: 225 KDERNQLVKERLLPCKFDVVIASYEIVIKEKSSFRKFDWQYIIIDEAHRIKNEESLLSQV 284
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VN 424
LR +R+L++GTPLQNN++EL++LLNFL P F++++ F F TE + V
Sbjct: 285 LREFTSSNRLLITGTPLQNNLHELWALLNFLLPDIFADSQDFDEWFSSETTEDDQDKIVK 344
Query: 425 KLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSA 484
+L +L+P +LRRLK DVE S+ PK+E + V ++++QKK+Y+ ILE++ ++ +
Sbjct: 345 QLHTVLQPFLLRRLKNDVETSLLPKKELNLYVGMSSMQKKWYKQILEKDIDAVNGSNVNK 404
Query: 485 NVPN-LMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL +G
Sbjct: 405 ESKTRLLNIVMQLRKCCNHPYLFDG 429
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 21/105 (20%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+ +SP + N LR YQ++GLNWL+ ++ ILADEM
Sbjct: 129 QFRESPGFIN-GQLRTYQIQGLNWLI-------------------SLHHYKLAGILADEM 168
Query: 78 GLGKTIQSLTFVDAV-FKTGIRGPFLVIAPLSTIPNWQREFEAWT 121
GLGKT+Q+++F+ + + I GPF+VIAP ST+ NW RE WT
Sbjct: 169 GLGKTLQTISFLGYLRYVEKIPGPFIVIAPKSTLNNWLREINKWT 213
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL---RLKYVAADY 214
I GPF+VIAP ST+ NW RE WT +++ + G + + ++ KERL + V A Y
Sbjct: 189 IPGPFIVIAPKSTLNNWLREINKWTPEVDAFILQGDKDERNQLVKERLLPCKFDVVIASY 248
>gi|239606662|gb|EEQ83649.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces
dermatitidis ER-3]
gi|327351568|gb|EGE80425.1| ISWI chromatin-remodeling complex ATPase ISW1 [Ajellomyces
dermatitidis ATCC 18188]
Length = 1132
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 136/204 (66%), Gaps = 6/204 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ D+++ I E+ + KF V IT++E+++ + LK F W IIDEAHR+KN L +
Sbjct: 283 KEDRHKLINERLVDEKFDVCITSYEMVLREKSHLKKFAWEYIIIDEAHRIKNEESSLAQI 342
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ H +R+L++GTPLQNN++EL++LLNFL P F +++AF F + + + V +L
Sbjct: 343 IRVFHSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDAFDQWFSNQEADQDTVVQQL 402
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSA 484
+L+P +LRR+K DVEKS+ PK+E + V ++++Q K+Y+ ILE++ + ++G +
Sbjct: 403 HRVLRPFLLRRVKSDVEKSLLPKKEMNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRES 462
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 463 KT-RLLNIVMQLRKCCNHPYLFEG 485
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 60/112 (53%), Gaps = 19/112 (16%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 189 ESPAFVKGGEMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQ--------------- 233
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
TI L ++ + GI GP L+ P ST+ NW REF WT D+NV+V
Sbjct: 234 -TIAFLGYLRHL--RGITGPHLITVPKSTLDNWHREFSKWTPDVNVLVLQGA 282
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP L+ P ST+ NW REF WT D+NV+V G ++ + ERL
Sbjct: 246 GITGPHLITVPKSTLDNWHREFSKWTPDVNVLVLQGAKEDRHKLINERL 294
>gi|330913020|ref|XP_003296155.1| hypothetical protein PTT_05138 [Pyrenophora teres f. teres 0-1]
gi|311331916|gb|EFQ95739.1| hypothetical protein PTT_05138 [Pyrenophora teres f. teres 0-1]
Length = 1131
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 133/203 (65%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++D+ IKE+ + F V IT++E+I+ + LK F W IIDEAHR+KN + L +
Sbjct: 287 KDDRADLIKERLVPDSFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNESSSLAQM 346
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R + R+L++GTPLQNN++EL++LLNFL P F ++ AF F Q +S+ V +L
Sbjct: 347 VRAFNSRSRLLITGTPLQNNLHELWALLNFLLPDVFGDSAAFDDWFSQQNADSDAIVKQL 406
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANV 486
+L+P +LRR+K DVEKS+ PK+E + V ++++Q ++Y+ ILE++ ++ G +
Sbjct: 407 HKVLRPFLLRRVKADVEKSLLPKKEINLYVGMSDMQVQWYKKILEKDIDAVNGGAGNKES 466
Query: 487 PN-LMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 467 KTRLLNIVMQLRKCCNHPYLFEG 489
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 62/108 (57%), Gaps = 19/108 (17%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + T+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q+++
Sbjct: 193 ESPGFIKGGTMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQTIS------------ 240
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIV 127
I L ++ GI GP LV P ST+ NW+REF W ++NV+V
Sbjct: 241 -FIGYLRYI-----AGITGPHLVAVPKSTLDNWKREFAKWCPEVNVLV 282
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 157 TGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRKKLSRRDKERL 205
GI GP LV P ST+ NW+REF W ++NV+V G + + KERL
Sbjct: 249 AGITGPHLVAVPKSTLDNWKREFAKWCPEVNVLVLQGNKDDRADLIKERL 298
>gi|255729544|ref|XP_002549697.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis
MYA-3404]
gi|240132766|gb|EER32323.1| chromatin remodelling complex ATPase chain ISW1 [Candida tropicalis
MYA-3404]
Length = 1024
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 136/207 (65%), Gaps = 9/207 (4%)
Query: 310 RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++++ + IK K + +F ++I ++EI+I + LK F+W +IDEAHR+KN L +
Sbjct: 217 KDERAELIKSKVMQCEFDIIIASYEIVIREKSTLKKFDWEYIVIDEAHRIKNEESLLSQI 276
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE-----V 423
+R+ H ++R+L++GTPLQNN+ EL++LLNF+ P F++NE+F F + E E +
Sbjct: 277 IRMFHSKNRLLITGTPLQNNLRELWALLNFILPDVFADNESFDEWFQKEDQEEEDQDKVI 336
Query: 424 NKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGT 481
++L +LKP +LRR+K DVEKS+ PK+E V V++ +QK Y+ ILE++ + S G
Sbjct: 337 SQLHKVLKPFLLRRIKADVEKSLLPKKELNVYVKMAPMQKNLYKKILEKDIDAVNGSNGK 396
Query: 482 TSANVPNLMNTMMELRKCCIHPYLLNG 508
+ L+N +M+LRKCC HPYL G
Sbjct: 397 KESKT-RLLNIVMQLRKCCNHPYLFEG 422
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 62/108 (57%), Gaps = 20/108 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP Y D LR YQ++GLNWL+ + N + ILADEMGLGKT+Q
Sbjct: 124 ESPGYV-DGKLRPYQIQGLNWLISLYENNLSGILADEMGLGKTLQ--------------- 167
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ + GI GP LVI P ST+ NWQREF W D+ V+V
Sbjct: 168 -TISFLGYL--RYMRGINGPHLVITPKSTLDNWQREFNRWIPDIKVLV 212
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
GI GP LVI P ST+ NWQREF W D+ V+V G +
Sbjct: 180 GINGPHLVITPKSTLDNWQREFNRWIPDIKVLVLQGDK 217
>gi|440635625|gb|ELR05544.1| hypothetical protein GMDG_07464 [Geomyces destructans 20631-21]
Length = 1122
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 136/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++++N I E+ + KF V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 273 KDERNLLINERLVDEKFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQV 332
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQ-LKTESEVNKL 426
+RL + +R+L++GTPLQNN++EL++LLNFL P F ++EAF F GQ ++ V +L
Sbjct: 333 IRLFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQGADQDTVVQQL 392
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSAN 485
+L+P +LRR+K DVEKS+ PK+E + + ++++Q K+Y+ ILE++ ++ G +
Sbjct: 393 HRVLRPFLLRRVKSDVEKSLLPKKEVNLYIGMSDMQVKWYKKILEKDIDAVNGAGGKRES 452
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 453 KTRLLNIVMQLRKCCNHPYLFEG 475
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 70/127 (55%), Gaps = 20/127 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K +K+ ++D V +SP + T+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 165 KDEKQGGSADTV-FRESPGFVKGGTMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQ 223
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLN 124
TI L ++ + I GP LVI P ST+ NW+REF WT ++N
Sbjct: 224 ----------------TIAFLGYLRHIMD--ITGPHLVIVPKSTLDNWKREFAKWTPEVN 265
Query: 125 VIVYHAT 131
V+V
Sbjct: 266 VLVLQGA 272
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
I GP LVI P ST+ NW+REF WT ++NV+V G + + + ERL
Sbjct: 237 ITGPHLVIVPKSTLDNWKREFAKWTPEVNVLVLQGAKDERNLLINERL 284
>gi|395538667|ref|XP_003771296.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 4 [Sarcophilus harrisii]
Length = 2011
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/215 (42%), Positives = 132/215 (61%), Gaps = 18/215 (8%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
S +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 885 SHAIIREKEFSFEDNAIHGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 944
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRL ++L G L +H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 945 VDEAHRL----FRVLNGYSL---QHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 997
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E+ L+ +QKKYY+ IL
Sbjct: 998 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSK----TELXLSPMQKKYYKYILT 1053
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 1054 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1087
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 100/162 (61%), Gaps = 6/162 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 172 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 231
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 232 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 291
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETV 453
EF + E ++ KL +L P MLRRLK DV K++ K E +
Sbjct: 292 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELI 333
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 771 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 827
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 828 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 871
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 872 PDMYVVTY 879
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 837 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 883
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 160 RGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
+GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 135 KGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 170
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Query: 98 RGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
+GPFLV APLSTI NW+REFE W D+ V+ Y
Sbjct: 135 KGPFLVSAPLSTIINWEREFEMWAPDMYVVTY 166
>gi|261197291|ref|XP_002625048.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces
dermatitidis SLH14081]
gi|239595678|gb|EEQ78259.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces
dermatitidis SLH14081]
Length = 1129
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 136/204 (66%), Gaps = 6/204 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ D+++ I E+ + KF V IT++E+++ + LK F W IIDEAHR+KN L +
Sbjct: 280 KEDRHKLINERLVDEKFDVCITSYEMVLREKSHLKKFAWEYIIIDEAHRIKNEESSLAQI 339
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ H +R+L++GTPLQNN++EL++LLNFL P F +++AF F + + + V +L
Sbjct: 340 IRVFHSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDAFDQWFSNQEADQDTVVQQL 399
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSA 484
+L+P +LRR+K DVEKS+ PK+E + V ++++Q K+Y+ ILE++ + ++G +
Sbjct: 400 HRVLRPFLLRRVKSDVEKSLLPKKEMNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRES 459
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 460 KT-RLLNIVMQLRKCCNHPYLFEG 482
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 60/112 (53%), Gaps = 19/112 (16%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 186 ESPAFVKGGEMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQ--------------- 230
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
TI L ++ + GI GP L+ P ST+ NW REF WT D+NV+V
Sbjct: 231 -TIAFLGYLRHL--RGITGPHLITVPKSTLDNWHREFSKWTPDVNVLVLQGA 279
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP L+ P ST+ NW REF WT D+NV+V G ++ + ERL
Sbjct: 243 GITGPHLITVPKSTLDNWHREFSKWTPDVNVLVLQGAKEDRHKLINERL 291
>gi|367040973|ref|XP_003650867.1| chromatin-remodeling complex ATPase-like protein [Thielavia
terrestris NRRL 8126]
gi|346998128|gb|AEO64531.1| chromatin-remodeling complex ATPase-like protein [Thielavia
terrestris NRRL 8126]
Length = 1125
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 135/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ +++Q I E+ + + F V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 270 KEERHQLINERLVDESFDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLAQV 329
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKL 426
+R+ + +R+L++GTPLQNN++EL++LLNFL P F ++EAF F GQ + + V +L
Sbjct: 330 IRMFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDRDQDTVVQQL 389
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSAN 485
+L+P +LRR+K DVEKS+ PK+E V V ++ +Q K+Y+ ILE++ ++ G +
Sbjct: 390 HRVLRPFLLRRVKSDVEKSLLPKKEVNVYVGMSEMQVKWYQKILEKDIDAVNGAGGKRES 449
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 450 KTRLLNIVMQLRKCCNHPYLFEG 472
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 20/108 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + + T+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 177 ESPAFIH-GTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQ--------------- 220
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ + GI GP L+ P ST+ NW REF WT ++NV+V
Sbjct: 221 -TIAFLGYLRHIM--GITGPHLITVPKSTLDNWNREFAKWTPEVNVLV 265
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP L+ P ST+ NW REF WT ++NV+V G +++ + ERL
Sbjct: 233 GITGPHLITVPKSTLDNWNREFAKWTPEVNVLVLQGAKEERHQLINERL 281
>gi|225682464|gb|EEH20748.1| SNF2 family ATP-dependent chromatin-remodeling factor snf21
[Paracoccidioides brasiliensis Pb03]
Length = 1120
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 136/204 (66%), Gaps = 6/204 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++D+++ I E+ + KF V IT++E+++ + LK F W IIDEAHR+KN L +
Sbjct: 273 KDDRHKLINERLVDEKFDVCITSYEMVLREKSHLKKFAWEYIIIDEAHRIKNEESSLAQI 332
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ H +R+L++GTPLQNN+ EL++LLNFL P F ++EAF F + + + V +L
Sbjct: 333 IRVFHSRNRLLITGTPLQNNLLELWALLNFLLPDVFGDSEAFNQWFSNQEADQDTVVQQL 392
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSA 484
+L+P +LRR+K DVEKS+ PK+E + V ++++Q K+Y+ ILE++ + ++G +
Sbjct: 393 HRVLRPFLLRRVKSDVEKSLLPKKEMNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRES 452
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 453 KT-RLLNIVMQLRKCCNHPYLFEG 475
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 67/127 (52%), Gaps = 20/127 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K +K+ S+ V +SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 165 KDEKRGGKSETV-FRESPTFIKGGEMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQ 223
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLN 124
TI L ++ + GI GP L+ P ST+ NW REF WT D+N
Sbjct: 224 ----------------TIAFLGYLRHI--CGITGPHLITVPKSTLDNWNREFAKWTPDVN 265
Query: 125 VIVYHAT 131
V+V
Sbjct: 266 VLVLQGA 272
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP L+ P ST+ NW REF WT D+NV+V G + + ERL
Sbjct: 236 GITGPHLITVPKSTLDNWNREFAKWTPDVNVLVLQGAKDDRHKLINERL 284
>gi|344304707|gb|EGW34939.1| transcriptional regulator [Spathaspora passalidarum NRRL Y-27907]
Length = 1410
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 129/211 (61%), Gaps = 10/211 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+R ++EYE + N K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 443 ARKTIREYEWYTPNGKP---------KFNVLLTTYEYILKDRNELGSIKWQFLAVDEAHR 493
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L+ + +R+L++GTPLQNN+ EL SL NFL P +F+ + E
Sbjct: 494 LKNSESSLYESLKGFKVANRLLITGTPLQNNLKELASLCNFLMPGKFNIEQEIDFESPDA 553
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E + LQ ++P +LRRLK+DVEKS+ K E ++ VEL++IQ YY+ I+ +N++ L
Sbjct: 554 EQERYIKDLQKKIQPFILRRLKKDVEKSLPSKTERILRVELSDIQTDYYKNIITKNYAAL 613
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+ G + + +L+N M EL+K HPYL +G
Sbjct: 614 NAGNKGSQI-SLLNIMSELKKASNHPYLFDG 643
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 62/112 (55%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL K PV+ + LR +QL GLNW+ F W N ILADEMGLGKTIQ
Sbjct: 344 KLVKQPVFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTIQ------------ 391
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
TI L+++ ++ GP LV+ PLST+P WQ FE W ++N + Y
Sbjct: 392 ----TISFLSWL--IYARRQNGPHLVVVPLSTMPAWQETFELWAPEVNCVYY 437
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GP LV+ PLST+P WQ FE W ++N + Y G
Sbjct: 407 GPHLVVVPLSTMPAWQETFELWAPEVNCVYYLG 439
>gi|325088122|gb|EGC41432.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces
capsulatus H88]
Length = 1112
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 137/204 (67%), Gaps = 6/204 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++D+++ I E+ + KF V IT++E+++ + LK F W +IDEAHR+KN L +
Sbjct: 263 KDDRHKLINERLVDEKFDVCITSYEMVLREKSHLKKFAWEYIVIDEAHRIKNEESSLAQI 322
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ H +R+L++GTPLQNN++EL++LLNFL P F +++AF F + + + V +L
Sbjct: 323 IRVFHSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDAFDQWFSNQEADQDTVVQQL 382
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSA 484
+L+P +LRR+K DVEKS+ PK+E + V ++++Q K+Y+ ILE++ + ++G +
Sbjct: 383 HRVLRPFLLRRVKSDVEKSLLPKKEMNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRES 442
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 443 KT-RLLNIVMQLRKCCNHPYLFEG 465
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 60/112 (53%), Gaps = 19/112 (16%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 169 ESPAFVKGGEMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQ--------------- 213
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
TI L ++ + GI GP L+ P ST+ NW REF WT D+NV+V
Sbjct: 214 -TIAFLGYLRHI--CGITGPHLITVPKSTLDNWHREFSKWTPDVNVLVLQGA 262
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP L+ P ST+ NW REF WT D+NV+V G + + ERL
Sbjct: 226 GITGPHLITVPKSTLDNWHREFSKWTPDVNVLVLQGAKDDRHKLINERL 274
>gi|340372667|ref|XP_003384865.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Amphimedon queenslandica]
Length = 1669
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 133/212 (62%), Gaps = 12/212 (5%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
SR M+Q+ E N KF+V+ITT+EI++ D L D +W + ++DEAH
Sbjct: 680 TSRKMIQDTEWAHANGN---------IKFNVVITTYEILLKDKDFLGDVSWAVLVVDEAH 730
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN + L + L + H HR+L++GTPLQN++ EL+SL++F+ +F + E F E
Sbjct: 731 RLKNDDSLLYKTLNMFHTNHRLLVTGTPLQNSLKELWSLIHFIMKDKFPSWEEFEEEHKA 790
Query: 417 LK--TESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
S ++ L L+P +LRR+K+DVEKS+ K E ++ VE++++QK+YYR IL RN+
Sbjct: 791 YHEGDTSNLSSLHQQLEPYLLRRIKKDVEKSLPSKVEQILRVEMSSVQKQYYRWILTRNY 850
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
LSKG ++ +N +MEL+KCC H Y++
Sbjct: 851 KALSKG-VKGSITGFINVLMELKKCCNHVYIV 881
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 61/100 (61%), Gaps = 21/100 (21%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR YQL+G+NWL+ SW + ILADEMGL GKTIQ+++F+
Sbjct: 595 LRDYQLDGVNWLVSSWCKNNSVILADEMGL-------------------GKTIQTISFLS 635
Query: 91 AVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
++F + GP+LV+ PLST+P+WQREF W +N +VY
Sbjct: 636 SLFHIYNLYGPYLVVVPLSTLPSWQREFSLWAPSMNTLVY 675
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GP+LV+ PLST+P+WQREF W +N +VY G
Sbjct: 645 GPYLVVVPLSTLPSWQREFSLWAPSMNTLVYIG 677
>gi|452982807|gb|EME82565.1| hypothetical protein MYCFIDRAFT_137581 [Pseudocercospora fijiensis
CIRAD86]
Length = 1079
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 125/188 (66%), Gaps = 3/188 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V IT++E+I+ + LK F W IIDEAHR+KN L + +R+ + +R+L++GT
Sbjct: 255 KFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQIIRIFNSRNRLLITGT 314
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKLQLLLKPMMLRRLKED 441
PLQNN++EL++LLNFL P F ++EAF S F + + V +L +L+P +LRR+K D
Sbjct: 315 PLQNNLHELWALLNFLLPDVFGDSEAFDSWFNNQDADQDTVVQQLHRVLRPFLLRRVKSD 374
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPN-LMNTMMELRKCC 500
VEKS+ PK+E + V ++ +Q K+Y+ ILE++ ++ + L+N +M+LRKCC
Sbjct: 375 VEKSLLPKKEMNLYVGMSEMQIKWYKSILEKDIDAVNGAAGNKESKTRLLNIVMQLRKCC 434
Query: 501 IHPYLLNG 508
HPYL +G
Sbjct: 435 NHPYLFDG 442
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 61/113 (53%), Gaps = 21/113 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP Y +R YQ+ GLNWL+ NG + ILADEMG LG
Sbjct: 146 ESPSYIQGGEMRDYQVAGLNWLISLHENGISGILADEMG-------------------LG 186
Query: 81 KTIQSLTFVDAV-FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
KT+Q+++F+ + F GI GP LV P ST+ NW+REF W ++NV+V
Sbjct: 187 KTLQTISFIGYLRFWQGITGPHLVAVPKSTLDNWKREFAKWIPEINVLVLQGA 239
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
F GI GP LV P ST+ NW+REF W ++NV+V G +++
Sbjct: 200 FWQGITGPHLVAVPKSTLDNWKREFAKWIPEINVLVLQGAKEE 242
>gi|327283794|ref|XP_003226625.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 2-like [Anolis carolinensis]
Length = 1863
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 132/209 (63%), Gaps = 10/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRN ++EYE K KF+VLITT+EI++ D L NW +DEAHR
Sbjct: 603 SRNAIREYEWVHAQSKR--------LKFNVLITTYEILLKDKTVLGSINWAFLGVDEAHR 654
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L HR+L++GTPLQN++ EL+SLL+F+ P++F E F E G+
Sbjct: 655 LKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEDEHGKG 714
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ ++ L +L+P +LRR+K+DVEKS+ K E ++ VE++ +QK+YY+ IL RN+ L
Sbjct: 715 R-DNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKAL 773
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
SKGT + +N +MEL+KCC H YL+
Sbjct: 774 SKGTR-GSTSGFLNIVMELKKCCNHCYLI 801
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 67/116 (57%), Gaps = 21/116 (18%)
Query: 16 WVKLEKSPVYKNDNTL--RAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+V L+K P Y L R YQLEGLNWL SW + ILADEMGLGKTIQ
Sbjct: 500 FVALKKQPSYIGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQ-------- 551
Query: 74 ADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
TI L+++ + + GPFL++ P+ST+ +WQRE E+ ++NVIVY
Sbjct: 552 --------TISFLSYL--FHQHQLYGPFLIVVPMSTLTSWQREIESCAPEINVIVY 597
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFL++ P+ST+ +WQRE E+ ++NVIVY G
Sbjct: 567 GPFLIVVPMSTLTSWQREIESCAPEINVIVYIG 599
>gi|322711378|gb|EFZ02951.1| chromatin remodelling complex ATPase chain ISW1 [Metarhizium
anisopliae ARSEF 23]
Length = 1056
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 126/188 (67%), Gaps = 3/188 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V IT++E+I+ + LK F W IIDEAHR+KN L + +RL +R+L++GT
Sbjct: 225 KFDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLSQIIRLFQSRNRLLITGT 284
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKLQLLLKPMMLRRLKED 441
PLQNN++EL++LLNFL P F ++EAF F GQ + + V +L +L+P +LRR+K D
Sbjct: 285 PLQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDRDQDTVVQQLHKVLRPFLLRRVKSD 344
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSANVPNLMNTMMELRKCC 500
VEKS+ PK+E V + ++++Q K+Y+ ILE++ ++ G + L+N +M+LRKCC
Sbjct: 345 VEKSLLPKKEVNVYLGMSDMQVKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCC 404
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 405 NHPYLFEG 412
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 19/102 (18%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 126 MRDYQVAGLNWLISLHENGISGILADEMGLGKTLQ----------------TISFLGYLR 169
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
+ GI GP L+ P ST+ NW+REF WT ++NV+V
Sbjct: 170 HI--AGITGPHLITVPKSTLDNWKREFAKWTPEVNVLVLQGA 209
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 157 TGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP L+ P ST+ NW+REF WT ++NV+V G +++ ERL
Sbjct: 172 AGITGPHLITVPKSTLDNWKREFAKWTPEVNVLVLQGAKEERHNLINERL 221
>gi|295660997|ref|XP_002791054.1| ISWI chromatin-remodeling complex ATPase ISW1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226280981|gb|EEH36547.1| ISWI chromatin-remodeling complex ATPase ISW1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 1154
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 136/204 (66%), Gaps = 6/204 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++D+++ I E+ + KF V IT++E+++ + LK F W IIDEAHR+KN L +
Sbjct: 307 KDDRHKLINERLVDEKFDVCITSYEMVLREKSHLKKFAWEYIIIDEAHRIKNEESSLAQI 366
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ H +R+L++GTPLQNN+ EL++LLNFL P F ++EAF F + + + V +L
Sbjct: 367 IRVFHSRNRLLITGTPLQNNLLELWALLNFLLPDVFGDSEAFNQWFSNQEADQDTVVQQL 426
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSA 484
+L+P +LRR+K DVEKS+ PK+E + V ++++Q K+Y+ ILE++ + ++G +
Sbjct: 427 HRVLRPFLLRRVKSDVEKSLLPKKEMNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRES 486
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 487 KT-RLLNIVMQLRKCCNHPYLFEG 509
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 60/108 (55%), Gaps = 19/108 (17%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 213 ESPTFIKGGEMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQ--------------- 257
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ + GI GP L+ P ST+ NW REF WT D+NV+V
Sbjct: 258 -TIAFLGYLRHI--CGITGPHLITVPKSTLDNWNREFAKWTPDVNVLV 302
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP L+ P ST+ NW REF WT D+NV+V G + + ERL
Sbjct: 270 GITGPHLITVPKSTLDNWNREFAKWTPDVNVLVLQGAKDDRHKLINERL 318
>gi|452005454|gb|EMD97910.1| hypothetical protein COCHEDRAFT_1221180 [Cochliobolus
heterostrophus C5]
Length = 1140
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 134/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++D+ + IK++ + F V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 279 KDDRAELIKDRLVPDGFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQM 338
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ + R+L++GTPLQNN++EL++LLNFL P F ++ AF F Q +S+ V +L
Sbjct: 339 VRMFNSRSRLLITGTPLQNNLHELWALLNFLLPDVFGDSAAFDDWFSQQNEDSDAVVQQL 398
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANV 486
+L+P +LRR+K DVEKS+ PK+E + V ++++Q ++Y+ ILE++ ++ G +
Sbjct: 399 HKVLRPFLLRRVKADVEKSLLPKKEINLYVGMSDMQVQWYKKILEKDIDAVNGGAGNKES 458
Query: 487 PN-LMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 459 KTRLLNIVMQLRKCCNHPYLFEG 481
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 21/113 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP Y T+R YQ+ GLNWL+ NG + ILADEMG LG
Sbjct: 185 ESPGYIQGGTMRDYQIAGLNWLISLHENGISGILADEMG-------------------LG 225
Query: 81 KTIQSLTFVDAV-FKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHAT 131
KT+Q+++FV + + GI GP LV P ST+ NW+REF W ++NV+V +
Sbjct: 226 KTLQTISFVGYLRYIAGITGPHLVAVPKSTLDNWKREFAKWCPEINVLVLQGS 278
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 157 TGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRKKLSRRDKERL 205
GI GP LV P ST+ NW+REF W ++NV+V G + + K+RL
Sbjct: 241 AGITGPHLVAVPKSTLDNWKREFAKWCPEINVLVLQGSKDDRAELIKDRL 290
>gi|451846943|gb|EMD60252.1| hypothetical protein COCSADRAFT_40675 [Cochliobolus sativus ND90Pr]
Length = 1127
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 134/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++D+ + IK++ + F V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 279 KDDRAELIKDRLVPDGFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQM 338
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ + R+L++GTPLQNN++EL++LLNFL P F ++ AF F Q +S+ V +L
Sbjct: 339 VRMFNSRSRLLITGTPLQNNLHELWALLNFLLPDVFGDSAAFDDWFSQQNEDSDAVVQQL 398
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSAN 485
+L+P +LRR+K DVEKS+ PK+E + V ++++Q ++Y+ ILE++ ++ G +
Sbjct: 399 HKVLRPFLLRRVKADVEKSLLPKKEINLYVGMSDMQVQWYKKILEKDIDAVNGGAGNKES 458
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 459 KTRLLNIVMQLRKCCNHPYLFEG 481
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 63/113 (55%), Gaps = 21/113 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP Y T+R YQ+ GLNWL+ NG + ILADEMG LG
Sbjct: 185 ESPGYIQGGTMRDYQIAGLNWLISLHENGISGILADEMG-------------------LG 225
Query: 81 KTIQSLTFVDAV-FKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHAT 131
KT+Q+++FV + + GI GP LV P ST+ NW+REF W ++N++V +
Sbjct: 226 KTLQTISFVGYLRYIAGITGPHLVAVPKSTLDNWKREFAKWCPEINILVLQGS 278
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 157 TGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRKKLSRRDKERL 205
GI GP LV P ST+ NW+REF W ++N++V G + + K+RL
Sbjct: 241 AGITGPHLVAVPKSTLDNWKREFAKWCPEINILVLQGSKDDRAELIKDRL 290
>gi|225559061|gb|EEH07344.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces
capsulatus G186AR]
Length = 1142
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 137/204 (67%), Gaps = 6/204 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++D+++ I E+ + KF V IT++E+++ + LK F W +IDEAHR+KN L +
Sbjct: 293 KDDRHKLINERLVDEKFDVCITSYEMVLREKSHLKKFAWEYIVIDEAHRIKNEESSLAQI 352
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ H +R+L++GTPLQNN++EL++LLNFL P F +++AF F + + + V +L
Sbjct: 353 IRVFHSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDAFDQWFSNQEADQDTVVQQL 412
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSA 484
+L+P +LRR+K DVEKS+ PK+E + V ++++Q K+Y+ ILE++ + ++G +
Sbjct: 413 HRVLRPFLLRRVKSDVEKSLLPKKEMNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRES 472
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 473 KT-RLLNIVMQLRKCCNHPYLFEG 495
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 60/112 (53%), Gaps = 19/112 (16%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 199 ESPAFVKGGEMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQ--------------- 243
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
TI L ++ + GI GP L+ P ST+ NW REF WT D+NV+V
Sbjct: 244 -TIAFLGYLRHI--CGITGPHLITVPKSTLDNWHREFSKWTPDVNVLVLQGA 292
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP L+ P ST+ NW REF WT D+NV+V G + + ERL
Sbjct: 256 GITGPHLITVPKSTLDNWHREFSKWTPDVNVLVLQGAKDDRHKLINERL 304
>gi|290978132|ref|XP_002671790.1| predicted protein [Naegleria gruberi]
gi|284085362|gb|EFC39046.1| predicted protein [Naegleria gruberi]
Length = 1069
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 134/209 (64%), Gaps = 11/209 (5%)
Query: 307 LFFRNDKNQF--IKEKDLY--KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRN 362
L F DK+Q IKEK L KF +++T++E I + L F W IIDEAHR+KN N
Sbjct: 278 LKFHGDKDQRREIKEKSLVGGKFEIVVTSYETAIKEKAALNKFRWYSIIIDEAHRIKNEN 337
Query: 363 CKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE 422
L + +R+ ++R+LL+GTPLQNN++EL+SLLNFL P F + + F + F + ++E
Sbjct: 338 SILSQSVRVFDCQYRLLLTGTPLQNNLHELWSLLNFLLPDVFRSADDFDTWFNLKEGQAE 397
Query: 423 ---VNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSK 479
+++L +LKP +LRRLK +V+ I PK+E VE L+ +QK++YR IL ++ + +
Sbjct: 398 THIIDQLHKVLKPFLLRRLKTEVKTDIPPKKEIYVECGLSKLQKEWYRSILTKDLNSIKG 457
Query: 480 GTTSANVPNLMNTMMELRKCCIHPYLLNG 508
G L+N +M+LRKCC HPYL +G
Sbjct: 458 GEKV----RLLNVVMQLRKCCNHPYLFDG 482
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 62/115 (53%), Gaps = 19/115 (16%)
Query: 17 VKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADE 76
V L SP + + TLR+YQ++G+NW++ G N ILADEMGLGKT+Q+LT
Sbjct: 186 VLLTSSPKFIENTTLRSYQIDGVNWMIRLHDRGVNGILADEMGLGKTVQTLT-------- 237
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
I L F+ IRGP LVI P S IPNW + W L V+ +H
Sbjct: 238 -----WIAYLKFI-----RRIRGPHLVIVPKSVIPNWVNQANQWCPSLQVLKFHG 282
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
IRGP LVI P S IPNW + W L V+ +HG
Sbjct: 248 IRGPHLVIVPKSVIPNWVNQANQWCPSLQVLKFHG 282
>gi|348503900|ref|XP_003439500.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Oreochromis niloticus]
Length = 1695
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 134/210 (63%), Gaps = 10/210 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
+SRNM++ +E + K KF++L+TT+EI++ D L NW +DEAH
Sbjct: 561 SSRNMIRTHEWMHSHSKR--------LKFNILLTTYEILLKDKSFLGSVNWAFIGVDEAH 612
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN + L + + HR+L++GTPLQN++ EL+SLL+F+ P++F + E F E G+
Sbjct: 613 RLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFHSWELFEDEHGK 672
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
+ +S L L+P +LRR+K+DVEKS+ K E ++ VE++ IQK+YY+ IL RN+
Sbjct: 673 GR-DSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQYYKWILTRNYKA 731
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
LSKG T + +N MMEL+KCC H YL+
Sbjct: 732 LSKG-TKGSTSGFLNIMMELKKCCNHCYLI 760
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 68/117 (58%), Gaps = 23/117 (19%)
Query: 16 WVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+V ++K P Y + LR YQL+ LNW+ SW +CILADEMGLGKTIQ++ C
Sbjct: 459 FVPMKKQPAYIGGDGLELRDYQLDSLNWMAHSWCKSNSCILADEMGLGKTIQTI---C-- 513
Query: 74 ADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
F++ +F + + GPFL++ PLST+ +WQRE W +NV+VY
Sbjct: 514 --------------FLNYLFNEHQLYGPFLLVVPLSTLTSWQREIHLWAPQMNVVVY 556
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFL++ PLST+ +WQRE W +NV+VY G
Sbjct: 526 GPFLLVVPLSTLTSWQREIHLWAPQMNVVVYLG 558
>gi|432889219|ref|XP_004075171.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Oryzias latipes]
Length = 1684
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 135/210 (64%), Gaps = 10/210 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
+SRNM++ +E + + KF++L+TT+EI++ D L + NW +DEAH
Sbjct: 557 SSRNMIRTHEWIHLHSRR--------LKFNILLTTYEILLKDKTFLGNVNWAFIGVDEAH 608
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN + L + + HR+L++GTPLQN++ EL+SLL+F+ P +F + E F ++ G+
Sbjct: 609 RLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPDKFHSWEHFEADHGK 668
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
+ +S L L+P +LRR+K+DVEKS+ K E ++ VE+T +QK+YY+ IL RN+
Sbjct: 669 GR-DSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMTAVQKQYYKWILTRNYKA 727
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
LSKG T + +N MMEL+KCC H YL+
Sbjct: 728 LSKG-TKGSTSGFLNVMMELKKCCNHCYLI 756
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 23/117 (19%)
Query: 16 WVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+V +++ P Y + LR YQL+ LNW+ SW G +CILADEMGL
Sbjct: 455 FVPMKRQPSYIGGDGLELRDYQLDSLNWMAHSWSKGNSCILADEMGL------------- 501
Query: 74 ADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GKTIQ+++F++ +F + + GPFL++ PLST+ +WQRE + W +NV+VY
Sbjct: 502 ------GKTIQTISFLNYLFHEHQLYGPFLLVVPLSTVTSWQREIQLWAPQMNVVVY 552
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFL++ PLST+ +WQRE + W +NV+VY G
Sbjct: 522 GPFLLVVPLSTVTSWQREIQLWAPQMNVVVYLG 554
>gi|226289865|gb|EEH45349.1| ISWI chromatin-remodeling complex ATPase ISW1 [Paracoccidioides
brasiliensis Pb18]
Length = 1146
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 136/204 (66%), Gaps = 6/204 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++D+++ I E+ + KF V IT++E+++ + LK F W IIDEAHR+KN L +
Sbjct: 290 KDDRHKLINERLVDEKFDVCITSYEMVLREKSHLKKFAWEYIIIDEAHRIKNEESSLAQI 349
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ H +R+L++GTPLQNN+ EL++LLNFL P F ++EAF F + + + V +L
Sbjct: 350 IRVFHSRNRLLITGTPLQNNLLELWALLNFLLPDVFGDSEAFNQWFSNQEADQDTVVQQL 409
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSA 484
+L+P +LRR+K DVEKS+ PK+E + V ++++Q K+Y+ ILE++ + ++G +
Sbjct: 410 HRVLRPFLLRRVKSDVEKSLLPKKEMNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRES 469
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 470 KT-RLLNIVMQLRKCCNHPYLFEG 492
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 67/127 (52%), Gaps = 20/127 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
K +K+ S+ V +SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 182 KDEKRGGKSETV-FRESPTFIKGGEMRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQ 240
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLN 124
TI L ++ + GI GP L+ P ST+ NW REF WT D+N
Sbjct: 241 ----------------TIAFLGYLRHI--CGITGPHLITVPKSTLDNWNREFAKWTPDVN 282
Query: 125 VIVYHAT 131
V+V
Sbjct: 283 VLVLQGA 289
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP L+ P ST+ NW REF WT D+NV+V G + + ERL
Sbjct: 253 GITGPHLITVPKSTLDNWNREFAKWTPDVNVLVLQGAKDDRHKLINERL 301
>gi|453086689|gb|EMF14731.1| SNF2 family helicase/ATPase [Mycosphaerella populorum SO2202]
Length = 1095
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 134/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++++ + I+E+ + KF V IT++E+I+ + LK F W +IDEAHR+KN L +
Sbjct: 257 KDERQELIQERLVDEKFDVCITSYEMILREKSHLKKFAWEYIVIDEAHRIKNEESSLAQI 316
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ + +R+L++GTPLQNN++EL++LLNFL P F + EAF S F + + V +L
Sbjct: 317 IRVFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDAEAFDSWFNNQDADQDAVVQQL 376
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANV 486
+L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ ILE++ ++ +
Sbjct: 377 HRVLRPFLLRRVKADVEKSLLPKKEVNLYVGMSEMQIKWYKSILEKDIDAVNGAAGNKES 436
Query: 487 PN-LMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL +G
Sbjct: 437 KTRLLNIVMQLRKCCNHPYLFDG 459
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 61/113 (53%), Gaps = 21/113 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP Y +R YQ+ GLNWL+ NG + ILADEMG LG
Sbjct: 163 ESPQYIQGGEMRDYQVAGLNWLISLHENGISGILADEMG-------------------LG 203
Query: 81 KTIQSLTFVDAV-FKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHAT 131
KT+Q+++F+ + F GI GP LV P ST+ NW+REF W ++NV+V
Sbjct: 204 KTLQTISFIGYLRFTQGITGPHLVAVPKSTLDNWKREFAKWIPEINVLVLQGA 256
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRKKLSRRDKERL 205
F GI GP LV P ST+ NW+REF W ++NV+V G + + +ERL
Sbjct: 217 FTQGITGPHLVAVPKSTLDNWKREFAKWIPEINVLVLQGAKDERQELIQERL 268
>gi|146414908|ref|XP_001483424.1| hypothetical protein PGUG_04153 [Meyerozyma guilliermondii ATCC
6260]
Length = 990
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 126/184 (68%), Gaps = 1/184 (0%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V+I+++EI+I + + FNW+ +IDEAHR+KN + L + +R+ H ++R+L++GTP
Sbjct: 239 FDVVISSYEIVIREKSAFRKFNWQYIVIDEAHRIKNEDSLLSQIVRMFHSKNRLLITGTP 298
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEK 444
LQNN++EL++LLNFL P F +++ F E+ Q E+ V +L +LKP +LRR+K DVEK
Sbjct: 299 LQNNLHELWALLNFLLPDVFGDSDTF-DEWFQSDEENLVQQLHKVLKPFLLRRIKSDVEK 357
Query: 445 SIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPY 504
+ PK+E + +T++Q+ +Y+ ILE++ ++ + L+N +M+LRKCC HPY
Sbjct: 358 LLLPKKELNIYCGMTDMQRSWYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKCCNHPY 417
Query: 505 LLNG 508
L G
Sbjct: 418 LFEG 421
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 55/100 (55%), Gaps = 19/100 (19%)
Query: 22 SPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGK 81
SP Y + LR YQ++GLNWL+ N + ILADEMGLGKT+Q
Sbjct: 131 SPAYVH-GKLREYQIQGLNWLVSLHENNLSGILADEMGLGKTLQ---------------- 173
Query: 82 TIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT 121
TI L ++ + K I GP LV+ P ST+ NW REF WT
Sbjct: 174 TISFLGYLRYIKK--INGPHLVVVPKSTLDNWAREFARWT 211
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRD 201
I GP LV+ P ST+ NW REF WT +++V++ G K +R D
Sbjct: 187 INGPHLVVVPKSTLDNWAREFARWTPEVHVLLLQG--DKDTRHD 228
>gi|365985357|ref|XP_003669511.1| hypothetical protein NDAI_0C06090 [Naumovozyma dairenensis CBS 421]
gi|343768279|emb|CCD24268.1| hypothetical protein NDAI_0C06090 [Naumovozyma dairenensis CBS 421]
Length = 1483
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 129/210 (61%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++E+E + N K K KF+VL+TT+E I+ DC EL W+ +DEAHR
Sbjct: 482 SRDTIREFEFY----TNPQAKGKKNVKFNVLMTTYEYILKDCSELGSIKWQFLAVDEAHR 537
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 538 LKNAESSLYESLNSFKVNNRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDE 597
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E + L L+ +LRRLK+DVEKS+ K E ++ VEL+++Q YY+ IL +N++ L
Sbjct: 598 QQEEYIRHLHSRLQAFILRRLKKDVEKSLPSKTERILRVELSDVQTGYYKNILTKNYAAL 657
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ G + +L+N M EL+K HPYL +
Sbjct: 658 TAGAKGGHF-SLLNIMSELKKASNHPYLFD 686
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P Y LR +QL G+NW+ F W N ILADEMGLGKT+Q
Sbjct: 383 KLTAQPSYIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQ------------ 430
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ ++ GP LV+ PLST+P WQ FE W +LN I Y
Sbjct: 431 ----TVAFISWL--IYARKQNGPHLVVVPLSTMPAWQETFEKWAPELNCICY 476
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
GP LV+ PLST+P WQ FE W +LN I Y G ++
Sbjct: 446 GPHLVVVPLSTMPAWQETFEKWAPELNCICYMGNQR 481
>gi|365986577|ref|XP_003670120.1| hypothetical protein NDAI_0E00610 [Naumovozyma dairenensis CBS 421]
gi|343768890|emb|CCD24877.1| hypothetical protein NDAI_0E00610 [Naumovozyma dairenensis CBS 421]
Length = 1115
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 126/190 (66%), Gaps = 5/190 (2%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
+F VLIT++E++I + LK W+ +IDEAHR+KN +L + +RLL+ +HR+L++GT
Sbjct: 277 RFDVLITSYEMVIKEKNALKKVAWQYIVIDEAHRIKNEESQLSQIIRLLYSKHRLLITGT 336
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P F ++ F F Q +E + V +L +L P +LRR+K
Sbjct: 337 PLQNNLHELWALLNFLLPDVFGDSGIFDDWFEQNNSEQDQEIVVQQLHTVLNPFLLRRIK 396
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSANVPNLMNTMMELRK 498
DVEKS+ PK ET V V +T++Q K+Y+ +LE++ ++ L+N +M+LRK
Sbjct: 397 ADVEKSLLPKIETNVYVGMTDMQIKWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRK 456
Query: 499 CCIHPYLLNG 508
CC HPYL G
Sbjct: 457 CCNHPYLFEG 466
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 30/151 (19%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
+ +SP + + LR YQ++GLNWL+ N + ILADEMGLGKT+Q
Sbjct: 166 VNESPSFIQNGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQ------------- 212
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHATFVVLLQ 137
TI L ++ + K I GPFL+I P ST+ NW+REF WT ++N I+ H
Sbjct: 213 ---TISFLGYLKYIKK--IDGPFLIIVPKSTLDNWRREFNKWTPEVNAIILH-------- 259
Query: 138 TGSKFFR--ICLEFFVDAVFKTGIRGPFLVI 166
G K R I +F + A F I +VI
Sbjct: 260 -GDKETRHKIIYDFILQARFDVLITSYEMVI 289
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
I GPFL+I P ST+ NW+REF WT ++N I+ HG ++
Sbjct: 226 IDGPFLIIVPKSTLDNWRREFNKWTPEVNAIILHGDKE 263
>gi|71014727|ref|XP_758754.1| hypothetical protein UM02607.1 [Ustilago maydis 521]
gi|46098544|gb|EAK83777.1| hypothetical protein UM02607.1 [Ustilago maydis 521]
Length = 1108
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 123/188 (65%), Gaps = 4/188 (2%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F VLITT+E+ + + LK +W +IDEAHR+KN + L + +R + R+L++GTP
Sbjct: 323 FDVLITTYEMCLREKSALKKLSWEYIVIDEAHRIKNVDSMLSQIVRAFNSRSRLLITGTP 382
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEF---GQLKTESEVNKLQLLLKPMMLRRLKED 441
LQNN+ EL+SLLNFL P FSN+E F S F G + V +L +L+P +LRR+K D
Sbjct: 383 LQNNLMELWSLLNFLLPDVFSNSEDFESWFKGKGDENQDQVVQQLHKVLRPFLLRRVKAD 442
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSANVPNLMNTMMELRKCC 500
VEKS+ PK+E + V LT +Q+K+Y+ ILE++ ++ G L+N +M+LRKCC
Sbjct: 443 VEKSLLPKKEINIFVGLTEMQRKWYKSILEKDIDAVNGGVGKKEGKTRLLNIVMQLRKCC 502
Query: 501 IHPYLLNG 508
HPYL +G
Sbjct: 503 NHPYLFDG 510
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 19/112 (16%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP Y +R YQ++GLNW++ + NG N ILADEMGLGKT+Q
Sbjct: 213 ESPAYVKGGKMRDYQVQGLNWMISLYHNGINGILADEMGLGKTLQ--------------- 257
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
TI L ++ +T G LV+ P ST+ NW REF W NV+ +
Sbjct: 258 -TISFLGYLRDFRETP--GFHLVVVPKSTLDNWYREFHRWVPGFNVVTLKGS 306
>gi|448113324|ref|XP_004202321.1| Piso0_001812 [Millerozyma farinosa CBS 7064]
gi|359465310|emb|CCE89015.1| Piso0_001812 [Millerozyma farinosa CBS 7064]
Length = 1023
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 129/191 (67%), Gaps = 7/191 (3%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V+IT++EI+I + + F W IIDEAHR+KN L + +R+ H ++R+L++GTP
Sbjct: 247 FDVVITSYEIVIKEKAAFRKFAWEYIIIDEAHRIKNEESLLSQIIRVFHSKNRLLITGTP 306
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE------VNKLQLLLKPMMLRRL 438
LQNN++EL++LLNFL P F +++AF S F +E E +++L +LKP +LRR+
Sbjct: 307 LQNNLHELWALLNFLLPDVFGDSDAFDSWFKGSGSEEEGNSDEIISQLHKVLKPFLLRRV 366
Query: 439 KEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSANVPNLMNTMMELR 497
K DVEKS+ PK+E V ++++++QK++Y+ ILE++ ++ + L+N +M+LR
Sbjct: 367 KSDVEKSLLPKKELNVYLKMSDMQKRWYQKILEKDIDAVNGANGKKESKTRLLNIVMQLR 426
Query: 498 KCCIHPYLLNG 508
KCC HPYL G
Sbjct: 427 KCCNHPYLFEG 437
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 20/108 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + N LR+YQ++GLNWL+ + N + ILADEMGLGKT+Q+++ +G
Sbjct: 138 ESPGFIN-GELRSYQIQGLNWLISLYENNLSGILADEMGLGKTLQTISF-------LGYL 189
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
+ I++ I GP ++I P ST+ NW REF WT D+NV+V
Sbjct: 190 RYIRN-----------IHGPHIIIVPKSTLDNWAREFARWTSDVNVLV 226
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
I GP ++I P ST+ NW REF WT D+NV+V G ++
Sbjct: 195 IHGPHIIIVPKSTLDNWAREFARWTSDVNVLVLQGDKE 232
>gi|410076200|ref|XP_003955682.1| hypothetical protein KAFR_0B02490 [Kazachstania africana CBS 2517]
gi|372462265|emb|CCF56547.1| hypothetical protein KAFR_0B02490 [Kazachstania africana CBS 2517]
Length = 1459
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 129/210 (61%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++E+E + N K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 458 SRDTIREFEFY----TNPQAKGKKNVKFNVLLTTYEYILKDRDELGSIKWQFLAVDEAHR 513
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 514 LKNAESSLYESLNSFKVHDRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDD 573
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E + +L L+P +LRRLK+DVEKS+ K E ++ VEL++IQ +YY+ IL +N+ L
Sbjct: 574 EQEEYIRELHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDIQTEYYKNILTKNYRAL 633
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
G ++ +L+N M EL+K HPYL +
Sbjct: 634 QAGAKGGHI-SLLNVMSELKKASNHPYLFD 662
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 56/113 (49%), Gaps = 21/113 (18%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL+ P Y LR +QL G+NW+ F W N ILADEMG
Sbjct: 359 KLDAQPSYIKSGELRDFQLTGINWMAFLWSKNDNGILADEMG------------------ 400
Query: 78 GLGKTIQSLTFVD-AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
LGKT+Q ++F+ V+ GP LV+ PLST+P WQ F W LN + Y
Sbjct: 401 -LGKTVQMVSFISWLVYSRKQNGPHLVVVPLSTMPAWQETFAKWAPGLNCVCY 452
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
V+ GP LV+ PLST+P WQ F W LN + Y G +K
Sbjct: 415 VYSRKQNGPHLVVVPLSTMPAWQETFAKWAPGLNCVCYMGNQK 457
>gi|154316737|ref|XP_001557689.1| hypothetical protein BC1G_03786 [Botryotinia fuckeliana B05.10]
Length = 1130
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 132/203 (65%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ ++N I E+ + KF V IT +E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 270 KEERNNLINERLIDEKFDVCITRYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQV 329
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG--QLKTESEVNKL 426
+RL + +R+L++GTPLQNN++EL++LLNFL P F + EAF F Q ++ V +L
Sbjct: 330 IRLFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDAEAFDQWFSGQQEDQDTVVQQL 389
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSAN 485
+L+P +LRR+K DVEKS+ PK+E + + ++++Q K+Y+ ILE++ ++ G +
Sbjct: 390 HRVLRPFLLRRVKADVEKSLLPKKEVNLYIGMSDMQVKWYKKILEKDIDAVNGAGGKRES 449
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 450 KTRLLNIVMQLRKCCNHPYLFEG 472
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 19/98 (19%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 186 MRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQ----------------TISFLGYLR 229
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
+ I GP L++ P ST+ NW+REF WT ++NV+V
Sbjct: 230 HIMD--ITGPHLIVVPKSTLDNWKREFIRWTPEVNVLV 265
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
I GP L++ P ST+ NW+REF WT ++NV+V G +++ + ERL
Sbjct: 234 ITGPHLIVVPKSTLDNWKREFIRWTPEVNVLVLQGAKEERNNLINERL 281
>gi|294655844|ref|XP_002770188.1| DEHA2C08294p [Debaryomyces hansenii CBS767]
gi|199430649|emb|CAG86104.4| DEHA2C08294p [Debaryomyces hansenii CBS767]
Length = 1034
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 124/192 (64%), Gaps = 8/192 (4%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V+++++EI+I + + F W IIDEAHR+KN L + +R+ H +R+L++GTP
Sbjct: 253 FDVVVSSYEIVIREKASFRKFAWEYIIIDEAHRIKNEESLLSQIIRMFHSRNRLLITGTP 312
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAF--------MSEFGQLKTESEVNKLQLLLKPMMLR 436
LQNN++EL++LLNF+ P F ++E F E G K E + +L +L+P +LR
Sbjct: 313 LQNNLHELWALLNFILPDVFGDSETFDQWFQNDNKDEHGNGKEEDVILQLHKVLQPFLLR 372
Query: 437 RLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMEL 496
R+K DVEKS+ PK+E + V ++++Q+K+Y+ ILE++ ++ + L+N +M+L
Sbjct: 373 RIKSDVEKSLLPKQEVNLYVSMSDMQRKWYQKILEKDIDAVNGANKKESKTRLLNIVMQL 432
Query: 497 RKCCIHPYLLNG 508
RKCC HPYL G
Sbjct: 433 RKCCNHPYLFEG 444
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 20/108 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP Y + LR YQ++GLNWL+ + N + ILADEMGLGKT+Q
Sbjct: 144 ESPGYIH-GKLRPYQIQGLNWLISLYENNLSGILADEMGLGKTLQ--------------- 187
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ + I GP ++I P ST+ NW REF WT D+ V+V
Sbjct: 188 -TISFLGYL--RYMRNINGPHIIIVPKSTLDNWAREFARWTPDVRVLV 232
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERLRLKYVAAD 213
+ I GP ++I P ST+ NW REF WT D+ V+V G K SR + + RL D
Sbjct: 197 YMRNINGPHIIIVPKSTLDNWAREFARWTPDVRVLVLQG--DKDSRHELIQKRLLACDFD 254
Query: 214 YVPKDGEVL 222
V E++
Sbjct: 255 VVVSSYEIV 263
>gi|149248292|ref|XP_001528533.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146448487|gb|EDK42875.1| chromatin remodelling complex ATPase chain ISW1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 917
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 127/189 (67%), Gaps = 6/189 (3%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V+I ++EI+I + K FNW +IDEAHR+KN L + +R+ H ++R+L++GTP
Sbjct: 125 FDVIIASYEIVIREKSTFKKFNWEYIVIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTP 184
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNK---LQL--LLKPMMLRRLK 439
LQNN+ EL++LLNF+ P F++NE+F E+ Q SE ++ LQL +LKP +LRR+K
Sbjct: 185 LQNNLRELWALLNFILPDVFADNESF-DEWFQNNDNSEEDQEVILQLHKVLKPFLLRRIK 243
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEKS+ PK+E V ++T +Q+ Y+ ILE++ ++ + L+N +M+LRKC
Sbjct: 244 ADVEKSLLPKKEINVYTKMTPMQRNLYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKC 303
Query: 500 CIHPYLLNG 508
C HPYL +G
Sbjct: 304 CNHPYLFDG 312
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 61/108 (56%), Gaps = 20/108 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP Y + LR YQ++GLNWL+ + N + ILADEMGLGKT+QS++ L
Sbjct: 16 ESPGYVH-GKLRPYQVQGLNWLVSLYENNLSGILADEMGLGKTLQSISFLGYLR------ 68
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
F GI GP LVIAP ST+ NW REF W ++N +V
Sbjct: 69 ------------FMHGINGPHLVIAPKSTLDNWHREFNRWIPEINAVV 104
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
F GI GP LVIAP ST+ NW REF W ++N +V G +++ S K R+
Sbjct: 69 FMHGINGPHLVIAPKSTLDNWHREFNRWIPEINAVVLQGDKEERSELIKNRI 120
>gi|154273573|ref|XP_001537638.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces
capsulatus NAm1]
gi|150415246|gb|EDN10599.1| chromatin remodelling complex ATPase chain ISW1 [Ajellomyces
capsulatus NAm1]
Length = 974
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 137/204 (67%), Gaps = 6/204 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++D+++ I E+ + KF V IT++E+++ + LK F W +IDEAHR+KN L +
Sbjct: 268 KDDRHKLINERLVDEKFDVCITSYEMVLREKSHLKKFAWEYIVIDEAHRIKNEESSLAQI 327
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ H +R+L++GTPLQNN++EL++LLNFL P F +++AF F + + + V +L
Sbjct: 328 IRVFHSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDAFDQWFSNQEADQDTVVQQL 387
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSA 484
+L+P +LRR+K DVEKS+ PK+E + V ++++Q K+Y+ ILE++ + ++G +
Sbjct: 388 HRVLRPFLLRRVKGDVEKSLLPKKEMNLYVGMSDMQVKWYQKILEKDIDAVNGAQGKRES 447
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 448 KT-RLLNIVMQLRKCCNHPYLFEG 470
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 72 ILADEMGLGKTIQSLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
ILADEMGLGKT+Q++ F+ + GI GP L+ P ST+ NW REF WT D+NV+V
Sbjct: 206 ILADEMGLGKTLQTIAFLGYLRHICGITGPHLITVPKSTLDNWHREFSKWTPDVNVLV 263
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP L+ P ST+ NW REF WT D+NV+V G + + ERL
Sbjct: 231 GITGPHLITVPKSTLDNWHREFSKWTPDVNVLVLQGAKDDRHKLINERL 279
>gi|389583592|dbj|GAB66326.1| helicase [Plasmodium cynomolgi strain B]
Length = 1455
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 123/191 (64%), Gaps = 9/191 (4%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
+ VL+TT+EI+I D L D +W +IDEAHR+KN L +R L E+R+L++GTP
Sbjct: 455 YDVLLTTYEIVIKDKSALFDIDWFFLVIDEAHRIKNDKSVLSSSVRFLRSENRLLITGTP 514
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLK------TESE-VNKLQLLLKPMMLRR 437
L NN+ EL+SLLNFL P+ F N+E F + F K +SE + +L +LKP MLRR
Sbjct: 515 LHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISLNDNKQSEIITQLHTILKPFMLRR 574
Query: 438 LKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELR 497
LK +VE+S+ PK E V V ++ +QKK Y IL +N ++ T S N ++N +M+LR
Sbjct: 575 LKVEVEQSLPPKREIYVFVGMSKLQKKLYSDILSKNIDVINAMTGSKN--QMLNILMQLR 632
Query: 498 KCCIHPYLLNG 508
KCC HPYL +G
Sbjct: 633 KCCNHPYLFDG 643
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 34/124 (27%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
++ YQ+EGLNWL + + N ILADEMGLGKT+Q+++ C L
Sbjct: 356 MKPYQIEGLNWLYQLYRHRINGILADEMGLGKTLQTISLLCYLR---------------- 399
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT----------------DLNVIVYHATFVV 134
F I+ ++I P ST+ NW +E + W +LN V H + V
Sbjct: 400 --FNKNIKRKSIIICPRSTLDNWYQEIKKWCTEMKAFKYYGSKEQRRELNKNVLHTDYDV 457
Query: 135 LLQT 138
LL T
Sbjct: 458 LLTT 461
>gi|332026198|gb|EGI66340.1| Chromodomain-helicase-DNA-binding protein 1 [Acromyrmex echinatior]
Length = 1821
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 135/208 (64%), Gaps = 10/208 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRN+++EYE +++ K KF+V++TT+EI++ D L NW + ++DEAHR
Sbjct: 536 SRNVIREYEWCYQDSKR--------LKFNVILTTYEIVLKDKTFLGALNWAVLLVDEAHR 587
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L H HR+L++GTPLQN++ EL++LL+F+ P +F++ E F +
Sbjct: 588 LKNDDSLLYKALTEFHTNHRLLITGTPLQNSLKELWALLHFIMPSKFASWEEFEKQHDNA 647
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ +KL L+P +LRR+K+DVEKS+ K E ++ VE+T++QK+YY+ IL +N+ L
Sbjct: 648 -AQKGYSKLHKQLEPFILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYEAL 706
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYL 505
KG + +N ++EL+KCC H +L
Sbjct: 707 RKGVKGSTT-TFLNIVIELKKCCNHAFL 733
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 66/116 (56%), Gaps = 24/116 (20%)
Query: 18 KLEKSPVY---KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
+L + P Y + D LR YQ++GLNWL+ SW + ILADEMGLGKTIQ++ C
Sbjct: 434 QLNEQPTYMGKEKDLILRDYQMDGLNWLIHSWCKENSVILADEMGLGKTIQTI---C--- 487
Query: 75 DEMGLGKTIQSLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
F+ +F T + GPFL++ PLST+ +WQRE W D+N + Y
Sbjct: 488 -------------FLYYLFHTQHLHGPFLLVVPLSTMTSWQREMSQWAPDINFVTY 530
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 139 GSKFFRICLEFFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
G IC +++ F T + GPFL++ PLST+ +WQRE W D+N + Y G
Sbjct: 480 GKTIQTICFLYYL---FHTQHLHGPFLLVVPLSTMTSWQREMSQWAPDINFVTYLG 532
>gi|254569384|ref|XP_002491802.1| Member of the imitation-switch (ISWI) class of ATP-dependent
chromatin remodeling complexes [Komagataella pastoris
GS115]
gi|238031599|emb|CAY69522.1| Member of the imitation-switch (ISWI) class of ATP-dependent
chromatin remodeling complexes [Komagataella pastoris
GS115]
Length = 1061
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 131/198 (66%), Gaps = 14/198 (7%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F VLI+++EI+I + L+ FNW +IDEAHR+KN L + +R+ H + R+L++GTP
Sbjct: 251 FDVLISSYEIVIREKSSLRKFNWDYIVIDEAHRIKNEESLLSQIIRMFHSKSRLLITGTP 310
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ--------LKTE-----SEVNKLQLLLK 431
LQNN++EL++LLNF+ P FS+++ F FG+ K+E S V +L +L+
Sbjct: 311 LQNNLHELWALLNFILPDIFSDSDTFDQWFGRGGDGDENDDKSEKNDQGSVVQQLHKVLQ 370
Query: 432 PMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF-SFLSKGTTSANVPNLM 490
P +LRR+K DVEKS+ PK+E V V ++++Q+++Y+ ILE++ + +S + L+
Sbjct: 371 PFLLRRIKSDVEKSLLPKKEVNVYVGMSDMQRQWYQKILEKDIDAVVSSSGKKESKTRLL 430
Query: 491 NTMMELRKCCIHPYLLNG 508
N +M+LRKCC HPYL G
Sbjct: 431 NIVMQLRKCCNHPYLFEG 448
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 19/108 (17%)
Query: 14 SDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
S +++ +SP Y N LR YQ++GLNWL+ + N + ILADEMGLGKT+Q
Sbjct: 135 SSFMEFTESPGYVN-GKLRPYQIQGLNWLVQLYENKLSGILADEMGLGKTLQ-------- 185
Query: 74 ADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT 121
TI L ++ + GI GP LV+ P ST+ NW REF+ WT
Sbjct: 186 --------TISFLGYL--RYLKGINGPHLVVVPKSTLDNWAREFKRWT 223
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
GI GP LV+ P ST+ NW REF+ WT ++ ++ G + +
Sbjct: 198 GINGPHLVVVPKSTLDNWAREFKRWTPEVKTVLLQGDKDQ 237
>gi|443894508|dbj|GAC71856.1| chromatin remodeling complex WSTF-ISWI, small subunit [Pseudozyma
antarctica T-34]
Length = 1106
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/188 (45%), Positives = 123/188 (65%), Gaps = 4/188 (2%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F VLITT+E+ + + LK +W IIDEAHR+KN + L + +R + R+L++GTP
Sbjct: 329 FDVLITTYEMCLREKSALKKLSWEYIIIDEAHRIKNVDSMLSQIVRAFNSRSRLLITGTP 388
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEF---GQLKTESEVNKLQLLLKPMMLRRLKED 441
LQNN+ EL+SLLNFL P FSN+E F S F G + V +L +L+P +LRR+K D
Sbjct: 389 LQNNLMELWSLLNFLLPDVFSNSEDFESWFKGKGDENQDQVVQQLHKVLRPFLLRRVKAD 448
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSANVPNLMNTMMELRKCC 500
VEKS+ PK+E + V LT +Q+K+Y+ ILE++ ++ G L+N +M+LRKCC
Sbjct: 449 VEKSLLPKKEINLFVGLTEMQRKWYKSILEKDIDAVNGGVGKKEGKTRLLNIVMQLRKCC 508
Query: 501 IHPYLLNG 508
HPYL +G
Sbjct: 509 NHPYLFDG 516
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 19/108 (17%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP Y T+R YQ++GLNW++ + NG N ILADEMGLGKT+Q+++ L D
Sbjct: 219 ESPAYVKGGTMRDYQVQGLNWMISLYHNGINGILADEMGLGKTLQTISFLGYLRD----- 273
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
F+ G LV+ P ST+ NW REF+ W NV+
Sbjct: 274 ------------FRN-TPGFHLVVVPKSTLDNWYREFQRWVPGFNVVT 308
>gi|340370186|ref|XP_003383627.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 5 [Amphimedon
queenslandica]
Length = 1047
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 127/187 (67%), Gaps = 3/187 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
+++V+IT++E+++ + K F+WR +IDEAHR+KN KL E +R + +R+LL+GT
Sbjct: 257 EWNVVITSYEMVLKEKATFKKFSWRYMVIDEAHRIKNEKSKLSEIVREFNTANRLLLTGT 316
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKLQLLLKPMMLRRLKED 441
PLQNN++EL++LLNFL P F ++E F + F + E V++L +L+P +LRRLK D
Sbjct: 317 PLQNNLHELWALLNFLLPDFFDSSEDFDAWFNKSNLEDSKLVDRLHTVLRPFLLRRLKSD 376
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCI 501
VEK + PK+ET V V L+ +Q++ Y GIL ++ ++ G L+N +M+LRKCC
Sbjct: 377 VEKKLPPKKETKVYVGLSKMQRELYTGILLKDIDVVN-GVGKMEKVRLLNILMQLRKCCN 435
Query: 502 HPYLLNG 508
HPYL +G
Sbjct: 436 HPYLFDG 442
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 18/100 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
++P + + +R YQ+ GLNW++ + NG N ILADEMGLGKT+Q
Sbjct: 148 ENPFFIKNGKMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQ--------------- 192
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW 120
TI L ++ + + GP +VIAP ST+ NW EF+ W
Sbjct: 193 -TIALLGYM--IHLRDVPGPHIVIAPKSTLANWMMEFKRW 229
>gi|45201219|ref|NP_986789.1| AGR123Cp [Ashbya gossypii ATCC 10895]
gi|44986073|gb|AAS54613.1| AGR123Cp [Ashbya gossypii ATCC 10895]
gi|374110038|gb|AEY98943.1| FAGR123Cp [Ashbya gossypii FDAG1]
Length = 1422
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 133/209 (63%), Gaps = 5/209 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR++++EYE + N K K KF+VL+TT+E I+ D LEL W+ +DEAHR
Sbjct: 442 SRDVIREYEFY----TNPHTKGKKNIKFNVLLTTYEYILKDRLELGAIKWQFLAVDEAHR 497
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 498 LKNAESSLYESLSSFKVANRMLITGTPLQNNIKELAALVNFLMPGKFTIDQEIDFENQDE 557
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
K E+ + L L+P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N++ L
Sbjct: 558 KQENYIRDLHKRLQPYILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYNAL 617
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ GT + +L+N M EL+K HPYL
Sbjct: 618 TAGTKGTHF-SLLNIMNELKKASNHPYLF 645
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 60/113 (53%), Gaps = 21/113 (18%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + LR +QL G+NW+ F W S + N ILADEM
Sbjct: 343 KLSVQPSFIKGGELRDFQLTGINWMAFLW-------------------SKSDNGILADEM 383
Query: 78 GLGKTIQSLTFVD-AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GLGKT+Q+++F+ +F GP LV+ PLST+P WQ FE W +LN + Y
Sbjct: 384 GLGKTVQTVSFISWLIFARRQNGPHLVVVPLSTMPAWQETFEKWAPELNCVYY 436
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
+F GP LV+ PLST+P WQ FE W +LN + Y G +K
Sbjct: 399 IFARRQNGPHLVVVPLSTMPAWQETFEKWAPELNCVYYMGNQK 441
>gi|294659674|ref|XP_462077.2| DEHA2G12496p [Debaryomyces hansenii CBS767]
gi|199434146|emb|CAG90563.2| DEHA2G12496p [Debaryomyces hansenii CBS767]
Length = 1405
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 130/213 (61%), Gaps = 10/213 (4%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ SR L+ YE + N+K KF++L+TT+E I+ D EL W+ +DEA
Sbjct: 440 TESRRNLRNYEFYQGNNKP---------KFNILLTTYEYILKDRNELGAIKWQFLAVDEA 490
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN L E L+ + +R+L++GTPLQNN+ EL +L NFL P +F+ + E
Sbjct: 491 HRLKNAESSLYESLKSFKVTNRLLITGTPLQNNIKELAALCNFLMPGKFNIEQEIDFESP 550
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
+ E + LQ ++P +LRRLK+DVEKS+ K E ++ VEL+++Q YY+ I+ +N+S
Sbjct: 551 DDQQEQYIKDLQKKIQPFILRRLKKDVEKSLPSKTERILRVELSDLQTDYYKNIITKNYS 610
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L+ G + + +L+N M EL+K HPYL +G
Sbjct: 611 ALNAGNKGSQI-SLLNVMSELKKASNHPYLFDG 642
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 63/112 (56%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL K P++ + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 343 KLVKQPLFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQ------------ 390
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ L+++ ++ GP LV+ PLST+P WQ FE W+ DLN I Y
Sbjct: 391 ----TVSFLSWL--IYARRQNGPHLVVVPLSTVPAWQETFEKWSPDLNCIYY 436
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRD 201
GP LV+ PLST+P WQ FE W+ DLN I Y G + SRR+
Sbjct: 406 GPHLVVVPLSTVPAWQETFEKWSPDLNCIYYLGNTE--SRRN 445
>gi|440297057|gb|ELP89787.1| CHD3-type chromatin-remodeling factor PICKLE, putative [Entamoeba
invadens IP1]
Length = 1343
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 124/184 (67%), Gaps = 2/184 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF+VL+TTFE++I D L ++W +DEAHRLKN +L E L LH E ++L++GT
Sbjct: 483 KFNVLLTTFELVIKDQGLLNLYHWGYLAVDEAHRLKNAEGQLYEALLNLHTECKLLITGT 542
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVE 443
PLQN + EL+SLL+FL P+QF N E F + ++ E+ K LKP +LRR+K++VE
Sbjct: 543 PLQNTLKELWSLLHFLHPEQFPNFEDF-EKTHKVNAAEELQKFHSELKPYILRRMKKEVE 601
Query: 444 KSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHP 503
KS+ PK+E ++ V L+ +QK+YYR I+ +N S L K + +LMN M+EL+K C HP
Sbjct: 602 KSLPPKKERILRVGLSGLQKQYYRWIITKNESALKKAVKQQKM-SLMNIMIELKKLCNHP 660
Query: 504 YLLN 507
L+N
Sbjct: 661 LLIN 664
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 21/100 (21%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR YQ+EG+NWL +++ N ILADEMGL GKTIQ++TF+
Sbjct: 380 LRDYQIEGVNWLTYAFSKNVNVILADEMGL-------------------GKTIQTITFLR 420
Query: 91 AVF-KTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVY 128
++ K GP LV+ PLSTI NW +EF W +N IVY
Sbjct: 421 HLYDKCNYVGPHLVVVPLSTINNWAKEFAKWAPRMNCIVY 460
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHG 192
GP LV+ PLSTI NW +EF W +N IVY G
Sbjct: 430 GPHLVVVPLSTINNWAKEFAKWAPRMNCIVYTG 462
>gi|444321550|ref|XP_004181431.1| hypothetical protein TBLA_0F03770 [Tetrapisispora blattae CBS 6284]
gi|387514475|emb|CCH61912.1| hypothetical protein TBLA_0F03770 [Tetrapisispora blattae CBS 6284]
Length = 1507
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 128/210 (60%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR +++YE + N K K KF+VL+TT+E I+ D L + W+ +DEAHR
Sbjct: 482 SRETIRDYEFY----TNPQAKTKKHLKFNVLLTTYEYILKDQPVLGNIKWQFLAVDEAHR 537
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 538 LKNAESSLYEALNSFKVGNRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDK 597
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E + L L+P +LRRLK+DVEKS+ K E ++ VEL++IQ YY+ IL +N+S L
Sbjct: 598 EQEEYIRNLHERLQPFILRRLKKDVEKSLPSKTERILRVELSDIQTDYYKNILTKNYSAL 657
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ G+ +L+N M EL+K HPYL N
Sbjct: 658 TAGSKGGQF-SLLNIMNELKKASNHPYLFN 686
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL + P + + LR +QL G+NW+ F W N ILADEMGLGKT+Q
Sbjct: 383 KLTEQPDFIHGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQ------------ 430
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ ++ +GP LV+ PLST+P WQ FE W LN I Y
Sbjct: 431 ----TVAFISWL--IYSRKQQGPHLVVVPLSTMPAWQETFEKWAPGLNCIYY 476
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
++ +GP LV+ PLST+P WQ FE W LN I Y G K
Sbjct: 439 IYSRKQQGPHLVVVPLSTMPAWQETFEKWAPGLNCIYYMGNEK 481
>gi|449018816|dbj|BAM82218.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a [Cyanidioschyzon merolae strain
10D]
Length = 1107
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 128/192 (66%), Gaps = 9/192 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
+F V +T++EI I + L+ F+WR IIDEAHR+KN N L + +R+ + ++R+L++GT
Sbjct: 249 RFDVCVTSYEIAILEKAVLRKFHWRYLIIDEAHRIKNENSVLSQVVRMYNSQNRLLITGT 308
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE-------VNKLQLLLKPMMLR 436
PLQNN++EL++LLNFL P FS++E F + F Q++ +E V +L +L+P +LR
Sbjct: 309 PLQNNLHELWALLNFLLPDVFSSSEDFDAWFEQVEGTTEEDAKAEMVRQLHAVLRPFLLR 368
Query: 437 RLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMEL 496
RLK +V + + PK+E +V V LT +Q + YR +L+++ +S + L+N +M+L
Sbjct: 369 RLKSEVARELPPKKERIVFVRLTKMQHELYRSLLKKDVDAIS--GQGGDRARLLNILMQL 426
Query: 497 RKCCIHPYLLNG 508
RKCC HPYL G
Sbjct: 427 RKCCNHPYLFEG 438
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 78/155 (50%), Gaps = 28/155 (18%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
T+R YQ+EGLNWL+ +G N ILADEMGLGKT+Q TI L F+
Sbjct: 149 TMRPYQIEGLNWLVRLHQHGINGILADEMGLGKTLQ----------------TIALLAFL 192
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHA-----TFVVLLQTGSKFF 143
V+K GIRGP LVIAP ST+ NW EFE + D V+ +H V Q F
Sbjct: 193 -KVYK-GIRGPHLVIAPKSTLGNWNLEFEKFCPDFRVVRFHGDQEERARVAASQLIVNRF 250
Query: 144 RICLEFFVDAVFKTGIRGPF----LVIAPLSTIPN 174
+C+ + A+ + + F L+I I N
Sbjct: 251 DVCVTSYEIAILEKAVLRKFHWRYLIIDEAHRIKN 285
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRKKLSR 199
V+K GIRGP LVIAP ST+ NW EFE + D V+ +HG +++ +R
Sbjct: 194 VYK-GIRGPHLVIAPKSTLGNWNLEFEKFCPDFRVVRFHGDQEERAR 239
>gi|260944400|ref|XP_002616498.1| hypothetical protein CLUG_03739 [Clavispora lusitaniae ATCC 42720]
gi|238850147|gb|EEQ39611.1| hypothetical protein CLUG_03739 [Clavispora lusitaniae ATCC 42720]
Length = 448
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 134/207 (64%), Gaps = 8/207 (3%)
Query: 310 RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++++ I+ K L F V++ ++EI+I + K F W+ +IDEAHR+KN L +
Sbjct: 139 KDERQHLIQNKLLSCDFDVVVASYEIVIREKSTFKKFAWQYIVIDEAHRIKNEESMLSQI 198
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE------ 422
+RL H +R+L++GTPLQNN++EL++LLNF+ P F +++AF F + E+
Sbjct: 199 IRLFHSRNRLLITGTPLQNNLHELWALLNFILPDVFGDSDAFDQWFTSEEEETSQGDGGV 258
Query: 423 VNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT- 481
V +L +LKP +LRR+K DVEKS+ PK+E V V++T++Q+K+Y+ ILE++ ++
Sbjct: 259 VAQLHKVLKPFLLRRIKSDVEKSLLPKQEMNVYVKMTDMQRKWYQKILEKDLDAVNGANG 318
Query: 482 TSANVPNLMNTMMELRKCCIHPYLLNG 508
+ L+N +M+LRKCC HPYL G
Sbjct: 319 KKESKTRLLNIVMQLRKCCNHPYLFEG 345
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 65/112 (58%), Gaps = 20/112 (17%)
Query: 17 VKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADE 76
V+ +SP Y + LR YQ++GLNWL+ + N + ILADEMGLGKT+Q
Sbjct: 42 VEFTESPAYIH-GELRPYQIQGLNWLVSLYENNLSGILADEMGLGKTLQ----------- 89
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ FK ++GP +VI P ST+ NW REF WT ++ V+V
Sbjct: 90 -----TISFLGYL-RYFK-NVKGPHIVITPKSTLDNWAREFAKWTPEVRVVV 134
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
++GP +VI P ST+ NW REF WT ++ V+V G +
Sbjct: 102 NVKGPHIVITPKSTLDNWAREFAKWTPEVRVVVLQGDK 139
>gi|224104242|ref|XP_002313369.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222849777|gb|EEE87324.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1748
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 127/190 (66%), Gaps = 3/190 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF L+TT+E+++ D L W ++DEAHRLKN +L L ++++L++GT
Sbjct: 714 KFSALLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLLEFSTKNKLLITGT 773
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKT--ESEVNKLQLLLKPMMLRRLKED 441
PLQN+V EL++LL+FL+P +F + + F+ + L + E+E+ L + L+P +LRR+ +D
Sbjct: 774 PLQNSVEELWALLHFLDPDKFRSKDDFVHNYKNLSSFNENELANLHMELRPHILRRVIKD 833
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCI 501
VEKS+ PK E ++ VE++ +QK+YY+ ILERNF L+KG V +L+N ++EL+KCC
Sbjct: 834 VEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQV-SLLNIVVELKKCCN 892
Query: 502 HPYLLNGKTY 511
HP+L +
Sbjct: 893 HPFLFESADH 902
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 19/123 (15%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL++ P + LR YQLEGLN+L+ SW N N ILADEMGLGKT+QS++ +
Sbjct: 606 KLDEQPEWLRGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSM-------L 658
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHATFVVLL 136
G + Q ++ GPFLV+ PLST+ NW +EF W D+NVIVY T
Sbjct: 659 GFLQNAQQIS-----------GPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGTRASRE 707
Query: 137 QTG 139
+ G
Sbjct: 708 RVG 710
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRKKLSR 199
I GPFLV+ PLST+ NW +EF W D+NVIVY G R R
Sbjct: 667 ISGPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGTRASRER 708
>gi|410081892|ref|XP_003958525.1| hypothetical protein KAFR_0G03580 [Kazachstania africana CBS 2517]
gi|372465113|emb|CCF59390.1| hypothetical protein KAFR_0G03580 [Kazachstania africana CBS 2517]
Length = 1055
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 135/206 (65%), Gaps = 8/206 (3%)
Query: 310 RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++++++ IKE L F V+I ++EI+I + L+ +W IIDEAHR+KN L +
Sbjct: 227 KDERSELIKENLLSCNFDVVIASYEIVIREKASLRKIDWEYIIIDEAHRIKNEESLLSQV 286
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VN 424
LR +R+L++GTPLQNN++EL++LLNFL P FS+++ F F TE + V
Sbjct: 287 LREFTSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDSQDFDDWFSSESTEKDQGSIVK 346
Query: 425 KLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTT 482
+L +L+P +LRR+K DVE S+ PK+E + V ++++QKK+YR ILE++ + S GT
Sbjct: 347 QLHTVLQPFLLRRIKNDVETSLLPKQELNLYVGMSSMQKKWYRKILEKDLDAVNGSNGTK 406
Query: 483 SANVPNLMNTMMELRKCCIHPYLLNG 508
+ L+N +M+LRKCC HPYL +G
Sbjct: 407 ESKT-RLLNIVMQLRKCCNHPYLFDG 431
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 19/101 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SPVY N LR YQ++GLNWL+ +G ILADEMGLGKT+Q
Sbjct: 134 ESPVYIN-GQLRHYQVQGLNWLISLHRSGLAGILADEMGLGKTLQ--------------- 177
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT 121
TI L ++ + K + GPFLVIAP ST+ NW+RE WT
Sbjct: 178 -TISFLGYLRYIEK--VPGPFLVIAPKSTLNNWKREVNRWT 215
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
+ GPFLVIAP ST+ NW+RE WT ++N + G + + S KE L
Sbjct: 191 VPGPFLVIAPKSTLNNWKREVNRWTPEINAFILQGDKDERSELIKENL 238
>gi|322694382|gb|EFY86213.1| chromatin remodelling complex ATPase chain ISW1 [Metarhizium
acridum CQMa 102]
Length = 1120
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 125/188 (66%), Gaps = 3/188 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V IT++E+I+ + LK F W IIDEAHR+KN L + +RL +R+L++GT
Sbjct: 289 KFDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLSQIIRLFQSRNRLLITGT 348
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKLQLLLKPMMLRRLKED 441
PLQNN++EL++LLNFL P F ++EAF F GQ + + V +L +L+P +LRR+K D
Sbjct: 349 PLQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDRDQDTVVQQLHKVLRPFLLRRVKSD 408
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSANVPNLMNTMMELRKCC 500
VEKS+ PK+E V + ++ +Q K+Y+ ILE++ ++ G + L+N +M+LRKCC
Sbjct: 409 VEKSLLPKKEVNVYLGMSEMQVKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCC 468
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 469 NHPYLFEG 476
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 19/102 (18%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 190 MRDYQVAGLNWLISLHENGISGILADEMGLGKTLQ----------------TISFLGYLR 233
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
+ GI GP L+ P ST+ NW+REF WT ++NV+V
Sbjct: 234 HI--AGITGPHLITVPKSTLDNWKREFAKWTPEVNVLVLQGA 273
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 157 TGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP L+ P ST+ NW+REF WT ++NV+V G +++ ERL
Sbjct: 236 AGITGPHLITVPKSTLDNWKREFAKWTPEVNVLVLQGAKEERHNLINERL 285
>gi|146415248|ref|XP_001483594.1| hypothetical protein PGUG_04323 [Meyerozyma guilliermondii ATCC
6260]
Length = 1367
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 132/213 (61%), Gaps = 11/213 (5%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ SR +++YEL+ + KF+V++TT+E I+ D EL W+ +DEA
Sbjct: 415 TESRATIRDYELY----------DGKKIKFNVMLTTYEYILKDRNELGSIKWQFLAVDEA 464
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN L E LRL + +R+L++GTPLQNN+ EL +L NFL P +F+ ++ E
Sbjct: 465 HRLKNAELSLYESLRLFRVANRLLITGTPLQNNIKELAALCNFLLPGRFNIDQEIDFETP 524
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
+ E + +LQ +KP +LRRLK+DVEK + K E ++ VEL+++Q YY+ I+ +N+S
Sbjct: 525 DAEQEKYIKELQQNIKPYILRRLKKDVEKLLPLKTERILRVELSDMQTDYYKNIITKNYS 584
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L+ G + + +L+N M EL+K HPYL +G
Sbjct: 585 ALNAGNSGLQI-SLLNVMAELKKASNHPYLFDG 616
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 61/112 (54%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL K P++ + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 318 KLVKQPLFIKNGELRDFQLTGLNWMAFLWLRNENGILADEMGLGKTVQ------------ 365
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
TI L+++ ++ GP LV+ PL TIP WQ FE W D+N I Y
Sbjct: 366 ----TIAFLSWL--IYARRQNGPHLVVVPLLTIPAWQETFEKWAPDVNCIYY 411
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GP LV+ PL TIP WQ FE W D+N I Y G
Sbjct: 381 GPHLVVVPLLTIPAWQETFEKWAPDVNCIYYLG 413
>gi|317138160|ref|XP_001816716.2| ISWI chromatin-remodeling complex ATPase ISW2 [Aspergillus oryzae
RIB40]
gi|391870029|gb|EIT79217.1| chromatin remodeling complex WSTF-ISWI, small subunit [Aspergillus
oryzae 3.042]
Length = 1122
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 134/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ ++++ I E+ L + F V IT++E+++ + LK F W IIDEAHR+KN L +
Sbjct: 279 KEERHKLINERLLDEDFDVCITSYEMVLREKSHLKKFAWEYIIIDEAHRIKNEESSLAQI 338
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ H +R+L++GTPLQNN++EL++LLNFL P F ++EAF F +++ + V +L
Sbjct: 339 IRVFHSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQESDQDTVVQQL 398
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTS-AN 485
+L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ ILE++ ++ +
Sbjct: 399 HRVLRPFLLRRVKSDVEKSLLPKKEVNLYVPMSEMQVKWYQKILEKDIDAVNGAAGKRES 458
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 459 KTRLLNIVMQLRKCCNHPYLFEG 481
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 56/98 (57%), Gaps = 19/98 (19%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 195 MRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQ----------------TISFLGYLR 238
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
V I GP LV P ST+ NW+REF WT D+NV+V
Sbjct: 239 HV--CDITGPHLVAVPKSTLDNWKREFHKWTPDVNVLV 274
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
I GP LV P ST+ NW+REF WT D+NV+V G +++ + ERL
Sbjct: 243 ITGPHLVAVPKSTLDNWKREFHKWTPDVNVLVLQGDKEERHKLINERL 290
>gi|221055808|ref|XP_002259042.1| snf2 family n-terminal domain [Plasmodium knowlesi strain H]
gi|193809113|emb|CAQ39815.1| snf2 family n-terminal domain, putative [Plasmodium knowlesi strain
H]
Length = 1382
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
+ VL+TT+EI+I D L D +W +IDEAHR+KN L +R L E+R+L++GTP
Sbjct: 401 YDVLLTTYEIVIKDKNALFDIDWFFLVIDEAHRIKNDKSVLSTSVRFLRSENRLLITGTP 460
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNK-------LQLLLKPMMLRR 437
L NN+ EL+SLLNFL P+ F N+E F + F K S NK L +LKP MLRR
Sbjct: 461 LHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISSNDNKQSEIITQLHTILKPFMLRR 520
Query: 438 LKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELR 497
LK +VE+ + PK E V V ++ +QKK Y IL +N ++ T S N ++N +M+LR
Sbjct: 521 LKMEVEQCLPPKREIYVFVGMSKLQKKLYSDILSKNIDVINAMTGSKN--QMLNILMQLR 578
Query: 498 KCCIHPYLLNG 508
KCC HPYL +G
Sbjct: 579 KCCNHPYLFDG 589
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 34/124 (27%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
++ YQ+EGLNWL + + N ILADEMGLGKT+Q+++ C L
Sbjct: 302 MKPYQIEGLNWLYQLYRHKINGILADEMGLGKTLQTISLLCYLR---------------- 345
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT----------------DLNVIVYHATFVV 134
F I+ ++I P ST+ NW +E + W +LN V H + V
Sbjct: 346 --FNKNIKRKSIIICPRSTLDNWYQEIKKWCTEMKAFKYYGNKEERRELNKNVLHTDYDV 403
Query: 135 LLQT 138
LL T
Sbjct: 404 LLTT 407
>gi|392593853|gb|EIW83178.1| transcription regulator [Coniophora puteana RWD-64-598 SS2]
Length = 1321
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 127/213 (59%), Gaps = 11/213 (5%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+A+R +++ YE N K K +VL+TT+E+++ D EL D W I+DEA
Sbjct: 351 AAAREVIRTYEFGASNKK---------LKMNVLLTTYELVLRDAKELADIKWHALIVDEA 401
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN +L E LR ++L++GTPLQNNV EL SL++FL P++F+ ++ F +
Sbjct: 402 HRLKNSESQLYEALRSFPSASKLLITGTPLQNNVKELLSLMHFLMPEKFALSDEF--DLN 459
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
E ++ +L L+ +MLRRLK DV S+ K E ++ VE++ +Q +Y+ IL +NF
Sbjct: 460 DADHEEKIKELHKQLESLMLRRLKRDVLTSLPTKSERILRVEMSALQTHFYKNILTKNFQ 519
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L K N +L+N MEL+K HPYL +G
Sbjct: 520 GLVKSANGNNNISLLNIAMELKKAANHPYLFDG 552
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 63/117 (53%), Gaps = 21/117 (17%)
Query: 18 KLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
++ K P Y + L+ +QL GLNWL +SW G N ILADEMGLGKT+Q+++ L
Sbjct: 252 RMTKDPDYISETGGELKDFQLTGLNWLAYSWSEGVNGILADEMGLGKTVQTVSFLSYLFH 311
Query: 76 EMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
EM GPFLVI PLSTI WQ +F W D+NVI Y T
Sbjct: 312 EMQQ------------------YGPFLVIVPLSTITAWQSQFATWAPDINVITYIGT 350
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFLVI PLSTI WQ +F W D+NVI Y G
Sbjct: 317 GPFLVIVPLSTITAWQSQFATWAPDINVITYIG 349
>gi|452819338|gb|EME26399.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria
sulphuraria]
Length = 2055
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 128/215 (59%), Gaps = 11/215 (5%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M++EYE F ++K Q KFHVL+TT E+I+ D W + +DEAHR
Sbjct: 604 SREMIREYEWFSPHNKKQC-------KFHVLVTTPEMILGDLQYFSMIRWAIVTVDEAHR 656
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMS--EFG 415
LKN L + L L +R+L++GTPLQN++ EL++LLN+L P+++++ F +F
Sbjct: 657 LKNEASALHQTLTSLTSANRLLITGTPLQNSIRELWALLNYLHPEKYNSASEFEEKYDFQ 716
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
L+ + L L+P +LRR K DVEKS+ K V+ V L +Q +YYR IL +NF+
Sbjct: 717 ALRKPENITSLHAELRPYILRRQKADVEKSLPRKTYAVLRVGLGPLQAQYYRWILTKNFA 776
Query: 476 FLSKG--TTSANVPNLMNTMMELRKCCIHPYLLNG 508
L+ G + L+N +MEL+KCC HPYL G
Sbjct: 777 MLNAGLKEKGGHATTLLNIVMELKKCCNHPYLFQG 811
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 59/99 (59%), Gaps = 19/99 (19%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR YQLEG+NWL FSW + RN ILADEMGLGKT+Q++ L E
Sbjct: 518 LRDYQLEGMNWLAFSWCHNRNVILADEMGLGKTLQTIAFLGWLRHE-------------- 563
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVY 128
+ GPFL++ PLSTI +WQREF W D NV++Y
Sbjct: 564 ----KNVPGPFLIVVPLSTIASWQREFSIWLPDFNVVLY 598
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHG 192
+ GPFL++ PLSTI +WQREF W D NV++Y G
Sbjct: 566 VPGPFLIVVPLSTIASWQREFSIWLPDFNVVLYTG 600
>gi|449471687|ref|XP_002197759.2| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Taeniopygia
guttata]
Length = 1794
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 132/209 (63%), Gaps = 10/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRNM++EYE K KF+ LITT+EI++ D L NW +D+AHR
Sbjct: 533 SRNMIREYEWIHSQSKR--------LKFNALITTYEILLKDKTVLGSINWAFLGVDQAHR 584
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L HR+L++GTPLQN++ EL+SLL+F+ P++F E F + G+
Sbjct: 585 LKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKG 644
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E+ L +L+P +LRR+K+DVEKS+ K E ++ VE++ +QK+YY+ IL RN+ L
Sbjct: 645 R-ENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKAL 703
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
SKGT + +N +MEL+KCC H YL+
Sbjct: 704 SKGTRGS-TSGFLNIVMELKKCCNHCYLI 731
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 16 WVKLEKSPVYKNDNTL--RAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+V L+K P Y L R YQLEGLNWL SW + ILADEMGLGKTIQ
Sbjct: 430 FVALKKQPSYIGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQ-------- 481
Query: 74 ADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
TI L+++ + + GPFLV+ PLST+ +WQREFE W ++NV+VY
Sbjct: 482 --------TISFLSYL--FHQHQLYGPFLVVVPLSTLTSWQREFEVWAPEINVVVY 527
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFLV+ PLST+ +WQREFE W ++NV+VY G
Sbjct: 497 GPFLVVVPLSTLTSWQREFEVWAPEINVVVYIG 529
>gi|238504258|ref|XP_002383360.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357]
gi|220690831|gb|EED47180.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357]
Length = 974
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 134/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ ++++ I E+ L + F V IT++E+++ + LK F W IIDEAHR+KN L +
Sbjct: 142 KEERHKLINERLLDEDFDVCITSYEMVLREKSHLKKFAWEYIIIDEAHRIKNEESSLAQI 201
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ H +R+L++GTPLQNN++EL++LLNFL P F ++EAF F +++ + V +L
Sbjct: 202 IRVFHSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQESDQDTVVQQL 261
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTS-AN 485
+L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ ILE++ ++ +
Sbjct: 262 HRVLRPFLLRRVKSDVEKSLLPKKEVNLYVPMSEMQVKWYQKILEKDIDAVNGAAGKRES 321
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 322 KTRLLNIVMQLRKCCNHPYLFEG 344
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 56/98 (57%), Gaps = 19/98 (19%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 58 MRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQ----------------TISFLGYLR 101
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
V I GP LV P ST+ NW+REF WT D+NV+V
Sbjct: 102 HV--CDITGPHLVAVPKSTLDNWKREFHKWTPDVNVLV 137
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
I GP LV P ST+ NW+REF WT D+NV+V G +++ + ERL
Sbjct: 106 ITGPHLVAVPKSTLDNWKREFHKWTPDVNVLVLQGDKEERHKLINERL 153
>gi|292606963|gb|ADE34162.1| chromodomain helicase DNA-binding protein 4 [Schmidtea mediterranea]
Length = 1868
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 134/215 (62%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFF-----RNDKNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E+E + R K+ +++ KFHVL+T++E+I D L +W + +
Sbjct: 820 SRAVVREHEFSYEEGAMRTSKHACRMRQGTRTKFHVLLTSYELISIDQALLGSISWEVLV 879
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L + +++LL+GTPLQNN+ ELF LL+F+ P++F++ + F+
Sbjct: 880 VDEAHRLKNNQSKFFRILSSYKINYKLLLTGTPLQNNLEELFHLLHFMTPEKFNDMQGFL 939
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E +V +L +L +LRRLK DV + K E +V VEL+ +Q K+Y+ IL
Sbjct: 940 DEFADISKEEQVKRLHEILGEHLLRRLKADVLTDMPSKGEFIVRVELSPMQAKFYKYILT 999
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF LS + + +L+N +M+L+KCC HPYL
Sbjct: 1000 RNFDALSVKGGGSQI-SLINIVMDLKKCCNHPYLF 1033
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 76/131 (58%), Gaps = 24/131 (18%)
Query: 3 LIKKPKKKPPASDWVK-LEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMG 59
++KK + P +D K + K P Y + L YQLEGLNWL FS+ N + ILADEMG
Sbjct: 703 ILKKIPPEHPTTDLKKRMSKQPDYIEETGGKLHQYQLEGLNWLRFSFGNVVDTILADEMG 762
Query: 60 LGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFE 118
L GKTIQ++TF+ +++K G +GPFLV APLST+ NW+REFE
Sbjct: 763 L-------------------GKTIQTITFLYSLYKEGHSKGPFLVAAPLSTVINWEREFE 803
Query: 119 AWT-DLNVIVY 128
W D V+ Y
Sbjct: 804 FWAPDFYVVTY 814
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLST+ NW+REFE W D V+ Y G +
Sbjct: 772 FLYSLYKEGHSKGPFLVAAPLSTVINWEREFEFWAPDFYVVTYVGDK 818
>gi|366993054|ref|XP_003676292.1| hypothetical protein NCAS_0D03500 [Naumovozyma castellii CBS 4309]
gi|342302158|emb|CCC69931.1| hypothetical protein NCAS_0D03500 [Naumovozyma castellii CBS 4309]
Length = 1025
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 134/205 (65%), Gaps = 6/205 (2%)
Query: 310 RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ ++ IKEK + F +++ ++EIII + K FNW IIDEAHR+KN L +
Sbjct: 197 KQERASLIKEKLMTCDFDIVVASYEIIIREKAAFKKFNWEYIIIDEAHRIKNEESLLSQV 256
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VN 424
LR +R+L++GTPLQNN++EL++LLNFL P FS+++ F F TE + V
Sbjct: 257 LREFTSRNRLLITGTPLQNNLHELWALLNFLLPDIFSSSQDFDDWFSSETTEEDQDKVVK 316
Query: 425 KLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTS 483
+L +L+P +LRR+K DVE S+ PK+E + V ++N+QKK+Y+ ILE++ ++ + ++
Sbjct: 317 QLHTVLQPFLLRRIKNDVETSLLPKKELNLYVGMSNMQKKWYKKILEKDLDAVNGENSSK 376
Query: 484 ANVPNLMNTMMELRKCCIHPYLLNG 508
+ L+N +M+LRKCC HPYL +G
Sbjct: 377 ESKTRLLNIVMQLRKCCNHPYLFDG 401
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 59/104 (56%), Gaps = 19/104 (18%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+ +SP Y + TLR YQ++GLNWL+ NG ILADEMGLGKT+Q
Sbjct: 101 QFRESPKYIH-GTLRPYQIQGLNWLVSLHKNGLAGILADEMGLGKTLQ------------ 147
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT 121
TI L ++ + GI GPFLVIAP ST+ NW RE WT
Sbjct: 148 ----TIAFLGYLK--YMEGINGPFLVIAPKSTLNNWLREINKWT 185
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
+ GI GPFLVIAP ST+ NW RE WT D+ V G +++ + KE+L
Sbjct: 157 YMEGINGPFLVIAPKSTLNNWLREINKWTPDVKAFVLQGDKQERASLIKEKL 208
>gi|328865462|gb|EGG13848.1| myb domain-containing protein [Dictyostelium fasciculatum]
Length = 1157
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 136/206 (66%), Gaps = 11/206 (5%)
Query: 312 DKNQFIKEKDLY--KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGL 369
D+ IKE L KF V ITT+E++I + K F+WR IIDEAHR+KN N L +G+
Sbjct: 303 DERAEIKENQLVYKKFDVCITTYEMVIKEKAVFKKFSWRYIIIDEAHRIKNENSVLSKGV 362
Query: 370 RLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG--QLKTESEV-NKL 426
RL + + R+L++GTPLQNN++EL++LLNFL P F+++E F F Q+ + EV +KL
Sbjct: 363 RLFNSQFRLLITGTPLQNNLHELWALLNFLLPDVFTSSEDFDKWFNLDQVDNQQEVIDKL 422
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS----KGTT 482
+L+P +LRR+K +VEKS+ PK+E + V ++ +Q+++Y+ +L ++F L KG +
Sbjct: 423 HKVLRPFLLRRIKSEVEKSLPPKKEIKLFVGMSTMQREWYKSLLTKDFEALHGIGVKGGS 482
Query: 483 SANVPNLMNTMMELRKCCIHPYLLNG 508
L+N M+LRK C HPYL +G
Sbjct: 483 GK--VKLLNICMQLRKACNHPYLFDG 506
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 19/110 (17%)
Query: 22 SPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGK 81
+P Y +R YQ+ GLNWL+ + G N ILADEMGLGKT+Q+++ L++
Sbjct: 209 NPPYIKHGVMRDYQIYGLNWLIQLYERGINGILADEMGLGKTLQTISLLGYLSE------ 262
Query: 82 TIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHA 130
+K GIRGP L+IAP ST+ W +EF W L V+ +H
Sbjct: 263 -----------YK-GIRGPHLIIAPKSTLSGWCKEFRNWCPFLRVVKFHG 300
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWTD-LNVIVYHGRR 194
GIRGP L+IAP ST+ W +EF W L V+ +HG +
Sbjct: 265 GIRGPHLIIAPKSTLSGWCKEFRNWCPFLRVVKFHGNK 302
>gi|83764570|dbj|BAE54714.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1113
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 134/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ ++++ I E+ L + F V IT++E+++ + LK F W IIDEAHR+KN L +
Sbjct: 270 KEERHKLINERLLDEDFDVCITSYEMVLREKSHLKKFAWEYIIIDEAHRIKNEESSLAQI 329
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ H +R+L++GTPLQNN++EL++LLNFL P F ++EAF F +++ + V +L
Sbjct: 330 IRVFHSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQESDQDTVVQQL 389
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTS-AN 485
+L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ ILE++ ++ +
Sbjct: 390 HRVLRPFLLRRVKSDVEKSLLPKKEVNLYVPMSEMQVKWYQKILEKDIDAVNGAAGKRES 449
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 450 KTRLLNIVMQLRKCCNHPYLFEG 472
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 56/98 (57%), Gaps = 19/98 (19%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 186 MRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQ----------------TISFLGYLR 229
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
V I GP LV P ST+ NW+REF WT D+NV+V
Sbjct: 230 HV--CDITGPHLVAVPKSTLDNWKREFHKWTPDVNVLV 265
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
I GP LV P ST+ NW+REF WT D+NV+V G +++ + ERL
Sbjct: 234 ITGPHLVAVPKSTLDNWKREFHKWTPDVNVLVLQGDKEERHKLINERL 281
>gi|307210254|gb|EFN86904.1| Chromodomain-helicase-DNA-binding protein 1 [Harpegnathos saltator]
Length = 1825
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 138/215 (64%), Gaps = 11/215 (5%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
+SRN+++E+E + + KF+ ++TT+EI++ D L NW + ++DEAH
Sbjct: 536 SSRNVIREHEWCYSTKR---------LKFNAILTTYEIVLKDKTFLGALNWAVLLVDEAH 586
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN + L + L H HR+L++GTPLQN++ EL++LL+F+ P +F++ E F E +
Sbjct: 587 RLKNDDSLLYKALAEFHTNHRLLITGTPLQNSLKELWALLHFIMPVKFNSWEEFEKEH-E 645
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
+ +KL L+P +LRR+K+DVEKS+ K E ++ VE+T++QK+YY+ IL +N+S
Sbjct: 646 NAAQKGYSKLHKQLEPFILRRVKKDVEKSLPAKVEQILRVEMTSVQKQYYKWILTKNYSA 705
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTY 511
L KGT + + +N ++EL+KCC H +L Y
Sbjct: 706 LRKGTKGSTM-TFLNIVIELKKCCNHAFLTKPTEY 739
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 21/103 (20%)
Query: 28 DNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLT 87
D LR YQ++GLNW++ SW + ILADEMGLGKTIQ++ C
Sbjct: 448 DLVLRDYQMDGLNWMIHSWCKENSVILADEMGLGKTIQTI---C---------------- 488
Query: 88 FVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
F+ +F T + GPFL++ PLST+ +WQRE W D+N + Y
Sbjct: 489 FLYYLFHTQQLYGPFLLVVPLSTMTSWQREMSQWAPDMNFVTY 531
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 112 NWQREFEAWTDLNVIVYHATFVVLLQTGSKFFRICLEFFVDAVFKTG-IRGPFLVIAPLS 170
NW +W N ++ + G IC +++ F T + GPFL++ PLS
Sbjct: 460 NWM--IHSWCKENSVI----LADEMGLGKTIQTICFLYYL---FHTQQLYGPFLLVVPLS 510
Query: 171 TIPNWQREFEAWT-DLNVIVYHG 192
T+ +WQRE W D+N + Y G
Sbjct: 511 TMTSWQREMSQWAPDMNFVTYLG 533
>gi|50551961|ref|XP_503455.1| YALI0E02332p [Yarrowia lipolytica]
gi|49649324|emb|CAG79034.1| YALI0E02332p [Yarrowia lipolytica CLIB122]
Length = 1028
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 130/189 (68%), Gaps = 6/189 (3%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V IT++E+++ + L+ F W+ +IDEAHR+KN L + +RL H E+R+L++GTP
Sbjct: 255 FDVCITSYEMVLREKGYLRRFAWQYIVIDEAHRIKNEESSLSQIIRLFHTENRLLITGTP 314
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKT---ESEVNKLQLLLKPMMLRRLKED 441
LQNN++EL++LLN++ P F ++ AF + FG+ ++ ++ VN+L +L+P +LRR+K D
Sbjct: 315 LQNNLHELWALLNYILPDVFQDSAAFDAWFGEDQSGDQDAAVNQLHKILRPFLLRRVKAD 374
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSK--GTTSANVPNLMNTMMELRKC 499
VEKS+ PK+E + V ++++Q K+Y+ ILE++ ++ G L+N +M+LRKC
Sbjct: 375 VEKSLLPKKEINLYVGMSDMQVKWYQKILEKDIDAVNGQIGKREGKT-RLLNIVMQLRKC 433
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 434 CNHPYLFEG 442
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 20/110 (18%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
E SP Y TLR YQ++GLNW++ + +G + ILADEMGLGKT+Q
Sbjct: 144 FETSPGYIQ-GTLREYQVQGLNWMVSLYEHGLSGILADEMGLGKTLQ------------- 189
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ + GI GP LV P ST+ NW REF WT ++NV+V
Sbjct: 190 ---TISFLGYL--RYFRGIPGPHLVCVPKSTLDNWAREFAKWTPEVNVLV 234
>gi|320591351|gb|EFX03790.1| snf2 family helicase [Grosmannia clavigera kw1407]
Length = 1138
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 125/187 (66%), Gaps = 3/187 (1%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V IT++E+I+ + L+ F W IIDEAHR+KN L + +RL + +R+L++GTP
Sbjct: 281 FDVCITSYEMILREKAHLRKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSRNRLLITGTP 340
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKLQLLLKPMMLRRLKEDV 442
LQNN++EL++LLNFL P F + EAF F GQ + + V +L +L+P +LRR+K DV
Sbjct: 341 LQNNLHELWALLNFLLPDVFGDAEAFDQWFSGQDRDQDTVVQQLHRVLRPFLLRRVKSDV 400
Query: 443 EKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSANVPNLMNTMMELRKCCI 501
EKS+ PK+E V V ++++Q K+Y+ ILE++ ++ G + L+N +M+LRKCC
Sbjct: 401 EKSLLPKKEMNVYVGMSDMQVKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCN 460
Query: 502 HPYLLNG 508
HPYL G
Sbjct: 461 HPYLFEG 467
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 19/98 (19%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 181 MRDYQVAGLNWLISLHENGISGILADEMGLGKTLQ----------------TISFLGYLR 224
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
+ G GP LVI P ST+ NW+REF WT ++NV+V
Sbjct: 225 HIM--GTTGPHLVIVPKSTLDNWKREFAKWTPEVNVLV 260
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
G GP LVI P ST+ NW+REF WT ++NV+V G +++ ERL
Sbjct: 228 GTTGPHLVIVPKSTLDNWKREFAKWTPEVNVLVLQGAKEERHTLIAERL 276
>gi|449296485|gb|EMC92505.1| hypothetical protein BAUCODRAFT_78119 [Baudoinia compniacensis UAMH
10762]
Length = 1098
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 134/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++++++ I E+ + KF V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 239 KDERHELINERLVDEKFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQI 298
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ + +R+L++GTPLQNN++EL++LLNFL P F + EAF F + + V +L
Sbjct: 299 IRIFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDAEAFDQWFSSQNADQDTVVQQL 358
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSAN 485
+L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ I+E++ ++ G +
Sbjct: 359 HRVLRPFLLRRVKADVEKSLLPKKEINLYVGMSEMQIKWYKNIIEKDIDAVNGAGGKKES 418
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL +G
Sbjct: 419 KTRLLNIVMQLRKCCNHPYLFDG 441
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 69/130 (53%), Gaps = 20/130 (15%)
Query: 3 LIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
LI++ K+ + + +SP Y +R YQ+ GLNWL+ NG + ILADEMGLGK
Sbjct: 128 LIRQGKQDGKEAQTI-FRESPSYIQGGEMRDYQVAGLNWLISLHENGISGILADEMGLGK 186
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT- 121
T+Q TI L ++ F GI GP LV+ P ST+ NW+REF W
Sbjct: 187 TLQ----------------TISFLGYL--RFVQGITGPHLVVVPKSTLDNWKREFAKWIP 228
Query: 122 DLNVIVYHAT 131
++N++V
Sbjct: 229 EINILVLQGA 238
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
F GI GP LV+ P ST+ NW+REF W ++N++V G + + ERL
Sbjct: 199 FVQGITGPHLVVVPKSTLDNWKREFAKWIPEINILVLQGAKDERHELINERL 250
>gi|448519638|ref|XP_003868122.1| Chd1 protein [Candida orthopsilosis Co 90-125]
gi|380352461|emb|CCG22687.1| Chd1 protein [Candida orthopsilosis]
Length = 1387
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 128/211 (60%), Gaps = 10/211 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
+R +++YE + N K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 434 ARRTIRDYEWYTPNGKP---------KFNVLLTTYEYILKDRNELGSLKWQFLAVDEAHR 484
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L E L+ +R+L++GTPLQNN+ EL +L NFL P +F + E
Sbjct: 485 LKNADSSLYESLKSFRCANRLLITGTPLQNNLKELAALCNFLMPGKFDIEQEIDFETPDE 544
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ ES + LQ +KP +LRRLK+DVE S+ K E ++ VEL++IQ YY+ I+ +N++ L
Sbjct: 545 EQESYIKDLQKKIKPYILRRLKKDVETSLPSKTERILRVELSDIQTDYYKNIITKNYAAL 604
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+ G + + +L+N M EL+K HPYL +G
Sbjct: 605 NAGNNGSQI-SLLNVMSELKKASNHPYLFDG 634
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 63/112 (56%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL K PV+ + LR +QL GLNW+ F W N ILADEMGLGKT+Q
Sbjct: 335 KLVKQPVFIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQ------------ 382
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ L+++ ++ GP LV+ PLSTIP WQ FE W+ D+N I Y
Sbjct: 383 ----TVAFLSWL--IYARRQNGPHLVVVPLSTIPAWQETFEKWSPDINCIYY 428
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GP LV+ PLSTIP WQ FE W+ D+N I Y G
Sbjct: 398 GPHLVVVPLSTIPAWQETFEKWSPDINCIYYLG 430
>gi|298714024|emb|CBJ27256.1| probable chromatin remodelling complex ATPase chain [Ectocarpus
siliculosus]
Length = 1563
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 129/207 (62%), Gaps = 8/207 (3%)
Query: 304 EYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNC 363
E RND E D + VL+TT+E+ + L WR IIDEAHRLKN +
Sbjct: 346 ERAATIRNDLKPGSPE-DERDWDVLVTTYEVANIEKTYLNKIGWRYLIIDEAHRLKNESS 404
Query: 364 KLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF-----GQLK 418
+R L ++R+LL+GTPLQNN++EL++LLNFL P F ++EAF F K
Sbjct: 405 LFSMTVRELTTQYRLLLTGTPLQNNLHELWALLNFLLPTVFQDSEAFSKVFDLNVDDADK 464
Query: 419 TESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS 478
++ + +L +L+P MLRRLK++VEKS+ PKEET++ ++ +Q+K Y+G+L R+ ++
Sbjct: 465 KQNMIKQLHKILRPFMLRRLKKEVEKSLPPKEETILFTSMSEVQRKVYKGVLMRDIDTIN 524
Query: 479 KGTTSANVPNLMNTMMELRKCCIHPYL 505
TSA ++N +M+LRKCC HPYL
Sbjct: 525 --GTSAGRTAILNIVMQLRKCCNHPYL 549
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 19/114 (16%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
L K P + T+R+YQLEGLNW++ G N ILADEMGLGKT+QS++ ILA
Sbjct: 248 LTKQPPSISGGTMRSYQLEGLNWMVNLQAQGTNGILADEMGLGKTLQSIS---ILA---- 300
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHAT 131
+ Q++T GP +++ P S + NWQ EF+ + D+ V+ T
Sbjct: 301 YMRDFQNVT-----------GPHIILLPKSVLGNWQLEFKRFCPDIRVLRLSGT 343
>gi|367008358|ref|XP_003678679.1| hypothetical protein TDEL_0A01360 [Torulaspora delbrueckii]
gi|359746336|emb|CCE89468.1| hypothetical protein TDEL_0A01360 [Torulaspora delbrueckii]
Length = 1450
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 132/210 (62%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR ++++E F+ N ++ K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 461 SRETIRDFE-FYTNPQS---KGKKNIKFNVLMTTYEYILKDRSELGSIKWQFLAVDEAHR 516
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L L + +R+L++GTPLQNN+ EL +L++FL P +F+ ++ E
Sbjct: 517 LKNAESSLYESLNSLKVSNRMLITGTPLQNNIKELAALIDFLMPGRFTIDQEIDFENQDN 576
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
E + L L+P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+S L
Sbjct: 577 AQEEYIRDLHERLQPFILRRLKKDVEKSLPGKTERILRVELSDVQTEYYKNILTKNYSAL 636
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
S G + +L+N M EL+K HPYL +
Sbjct: 637 SAGAKGGHF-SLLNVMSELKKASNHPYLFD 665
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + LR +QL G+NW+ F W N ILADEMGLGKT+Q
Sbjct: 362 KLSTQPPFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQ------------ 409
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ VF GP L++ PLST+P WQ FE W DL+ I Y
Sbjct: 410 ----TVAFISWL--VFARRQNGPHLIVVPLSTMPAWQETFERWAPDLDCICY 455
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
VF GP L++ PLST+P WQ FE W DL+ I Y G +K
Sbjct: 418 VFARRQNGPHLIVVPLSTMPAWQETFERWAPDLDCICYMGNQK 460
>gi|358365375|dbj|GAA81997.1| SNF2 family helicase/ATPase [Aspergillus kawachii IFO 4308]
Length = 1121
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 133/209 (63%), Gaps = 7/209 (3%)
Query: 307 LFFRNDKNQ---FIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRN 362
L + DK Q I E+ L + F V IT++E+I+ + LK F W IIDEAHR+KN
Sbjct: 275 LVLQGDKEQRHKLINEELLDENFDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEE 334
Query: 363 CKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE 422
L + +R+ H +R+L++GTPLQNN++EL++LLNFL P F ++EAF F ++ +
Sbjct: 335 SSLAQIIRVFHSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDSDQD 394
Query: 423 --VNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKG 480
V +L +L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ ILE++ ++
Sbjct: 395 TVVQQLHRVLRPFLLRRVKSDVEKSLLPKKEVNLYVPMSEMQVKWYQKILEKDIDAVNGA 454
Query: 481 TTS-ANVPNLMNTMMELRKCCIHPYLLNG 508
+ L+N +M+LRKCC HPYL G
Sbjct: 455 AGKRESKTRLLNIVMQLRKCCNHPYLFEG 483
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 56/98 (57%), Gaps = 19/98 (19%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 197 MRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQ----------------TISFLGYLR 240
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
V I GP L+ P ST+ NW+REF WT ++NV+V
Sbjct: 241 HV--CDITGPHLIAVPKSTLDNWKREFGKWTPEVNVLV 276
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
I GP L+ P ST+ NW+REF WT ++NV+V G +++
Sbjct: 245 ITGPHLIAVPKSTLDNWKREFGKWTPEVNVLVLQGDKEQ 283
>gi|313228968|emb|CBY18120.1| unnamed protein product [Oikopleura dioica]
Length = 996
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 119/188 (63%), Gaps = 4/188 (2%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F VL+TT+E + + LK NWR CIIDEAHR+KN KL LR +R+LL+GTP
Sbjct: 222 FDVLVTTYEQCMMEKSSLKKINWRYCIIDEAHRIKNEKSKLSLILREFRTTNRLLLTGTP 281
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE---VNKLQLLLKPMMLRRLKED 441
LQNN++EL++LLNFL P F + + F F Q K E +++L +LLKP MLRR+K D
Sbjct: 282 LQNNLHELWALLNFLLPDIFIDADNFDEYFDQKKLGQELDLISRLHMLLKPFMLRRVKAD 341
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL-SKGTTSANVPNLMNTMMELRKCC 500
VEKS+ PK+ + V ++ +QK +Y+ IL ++ L + G LMN +M LRKC
Sbjct: 342 VEKSLLPKKLVNIYVPMSEMQKNWYKKILLKDIDILNTGGDKGGGKMRLMNILMHLRKCT 401
Query: 501 IHPYLLNG 508
HPYL +G
Sbjct: 402 NHPYLFDG 409
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 18/105 (17%)
Query: 17 VKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADE 76
+ +SP Y +R YQ+ GLNW++ + G + ILADEMGLGKT+Q+++
Sbjct: 108 ARFTESPPYVKFGKMRDYQIRGLNWMIGLYEKGVSGILADEMGLGKTLQTISM------- 160
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT 121
+G K Q GP LVI P STI NW EF+ W
Sbjct: 161 VGYLKNYQKCN-----------GPHLVIVPKSTIQNWMNEFDRWV 194
>gi|354546892|emb|CCE43624.1| hypothetical protein CPAR2_212680 [Candida parapsilosis]
Length = 1022
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 125/187 (66%), Gaps = 3/187 (1%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V++ ++EI+I + K F+W +IDEAHR+KN L + +R+ H ++R+L++GTP
Sbjct: 232 FDVIVASYEIVIREKATFKKFDWEYIVIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTP 291
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE---VNKLQLLLKPMMLRRLKED 441
LQNN+ EL++LLNF+ P F++ ++F F + +T + +++L +LKP +LRR+K D
Sbjct: 292 LQNNLRELWALLNFILPDVFADTDSFDEWFQKDETSEDGEVISQLHKVLKPFLLRRIKAD 351
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCI 501
VEKS+ PK+E + ++T +QK Y+ ILE++ ++ + L+N +M+LRKCC
Sbjct: 352 VEKSLLPKKELNIYTKMTPMQKNLYQKILEKDIDAVNGANKKESKTRLLNIVMQLRKCCN 411
Query: 502 HPYLLNG 508
HPYL +G
Sbjct: 412 HPYLFDG 418
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 20/108 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP Y N LR YQ++GLNWL+ + N + ILADEMGLGKT+Q
Sbjct: 123 ESPGYVN-GELRPYQIQGLNWLVSLYENNLSGILADEMGLGKTLQ--------------- 166
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ ++K I GP LVIAP ST+ NW REF+ W D+NV+V
Sbjct: 167 -TISFLGYLRFMYK--INGPHLVIAPKSTLDNWYREFQRWIPDINVLV 211
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
F I GP LVIAP ST+ NW REF+ W D+NV+V G + + S K R+
Sbjct: 176 FMYKINGPHLVIAPKSTLDNWYREFQRWIPDINVLVLQGDKDERSDMIKNRV 227
>gi|388853645|emb|CCF52817.1| probable ISW2-ATPase component of a two subunit chromatin
remodeling complex [Ustilago hordei]
Length = 1113
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 124/188 (65%), Gaps = 4/188 (2%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F VLITT+E+ + + LK +W +IDEAHR+KN + L + +R + R+L++GTP
Sbjct: 328 FDVLITTYEMCLREKSALKKLSWEYIVIDEAHRIKNVDSILSQIVRAFNSRSRLLITGTP 387
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEF---GQLKTESEVNKLQLLLKPMMLRRLKED 441
LQNN+ EL+SLLNFL P FSN+E F + F G + V +L +L+P +LRR+K D
Sbjct: 388 LQNNLMELWSLLNFLLPDVFSNSEDFETWFKGKGDENQDQVVQQLHKVLRPFLLRRVKAD 447
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSANVPNLMNTMMELRKCC 500
VEKS+ PK+E + V LT++Q+++Y+ ILE++ ++ G L+N +M+LRKCC
Sbjct: 448 VEKSLLPKKEINIFVGLTDMQRRWYKSILEKDIDAVNGGVGRKQGKTRLLNIVMQLRKCC 507
Query: 501 IHPYLLNG 508
HPYL +G
Sbjct: 508 NHPYLFDG 515
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 19/108 (17%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP Y T+R YQ++GLNW++ + NG N ILADEMGLGKT+Q
Sbjct: 218 ESPSYVKGGTMRDYQIQGLNWMISLYHNGINGILADEMGLGKTLQ--------------- 262
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ + T G LV+ P ST+ NW REF+ W NV+
Sbjct: 263 -TISFLGYLRDLRDTP--GFHLVVVPKSTLDNWYREFQRWVPGFNVVT 307
>gi|336466447|gb|EGO54612.1| chromatin remodelling complex ATPase chain ISW1 [Neurospora
tetrasperma FGSC 2508]
gi|350286687|gb|EGZ67934.1| chromatin remodelling complex ATPase chain ISW1 [Neurospora
tetrasperma FGSC 2509]
Length = 1126
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 135/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ ++ Q I+++ + + F V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 267 KEERQQLIQDRLVDENFDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLAQV 326
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKL 426
+R+ + +R+L++GTPLQNN++EL++LLNFL P F ++EAF F GQ + + V +L
Sbjct: 327 IRVFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDRDQDTVVQQL 386
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSAN 485
+L+P +LRR+K DVEKS+ PK+E V + ++ +Q K+Y+ ILE++ ++ G +
Sbjct: 387 HRVLRPFLLRRVKSDVEKSLLPKKEVNVYIGMSEMQVKWYQKILEKDIDAVNGAGGKRES 446
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 447 KTRLLNIVMQLRKCCNHPYLFEG 469
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 58/103 (56%), Gaps = 19/103 (18%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
T+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 182 TMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQ----------------TISFLGYL 225
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
+ T GP LVI P ST+ NW+REF WT ++NV+V
Sbjct: 226 RHIMDTS--GPHLVIVPKSTLDNWKREFAKWTPEVNVLVLQGA 266
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GP LVI P ST+ NW+REF WT ++NV+V G +++ + ++RL
Sbjct: 233 GPHLVIVPKSTLDNWKREFAKWTPEVNVLVLQGAKEERQQLIQDRL 278
>gi|317025573|ref|XP_001389339.2| ISWI chromatin-remodeling complex ATPase ISW2 [Aspergillus niger
CBS 513.88]
Length = 1121
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 133/209 (63%), Gaps = 7/209 (3%)
Query: 307 LFFRNDKNQ---FIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRN 362
L + DK Q I E+ L + F V IT++E+I+ + LK F W IIDEAHR+KN
Sbjct: 275 LVLQGDKEQRHKLINEELLDENFDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEE 334
Query: 363 CKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE 422
L + +R+ H +R+L++GTPLQNN++EL++LLNFL P F ++EAF F ++ +
Sbjct: 335 SSLAQIIRVFHSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDSDQD 394
Query: 423 --VNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKG 480
V +L +L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ ILE++ ++
Sbjct: 395 TVVQQLHRVLRPFLLRRVKSDVEKSLLPKKEVNLYVPMSEMQVKWYQKILEKDIDAVNGA 454
Query: 481 TTS-ANVPNLMNTMMELRKCCIHPYLLNG 508
+ L+N +M+LRKCC HPYL G
Sbjct: 455 AGKRESKTRLLNIVMQLRKCCNHPYLFEG 483
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 21/109 (19%)
Query: 20 EKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGL 79
E P K + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 188 ESPPFIKGE--MRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQ-------------- 231
Query: 80 GKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ V + I GP L+ P ST+ NW+REF WT ++NV+V
Sbjct: 232 --TISFLGYLRHVCE--ITGPHLIAVPKSTLDNWKREFGKWTPEVNVLV 276
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
I GP L+ P ST+ NW+REF WT ++NV+V G +++
Sbjct: 245 ITGPHLIAVPKSTLDNWKREFGKWTPEVNVLVLQGDKEQ 283
>gi|45199055|ref|NP_986084.1| AFR537Wp [Ashbya gossypii ATCC 10895]
gi|44985130|gb|AAS53908.1| AFR537Wp [Ashbya gossypii ATCC 10895]
Length = 1025
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 130/205 (63%), Gaps = 6/205 (2%)
Query: 310 RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
R + Q I+E+ L F VLIT++E++I + LK F W+ +IDEAHR+KN L +
Sbjct: 212 RETRTQLIEERILTCDFDVLITSYEMVIKEKAILKKFAWQYIVIDEAHRIKNEQSTLSQI 271
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VN 424
+RL + + R+L++GTPLQNN++EL++LLNFL P F +E F F Q + + V
Sbjct: 272 IRLFYSKSRLLITGTPLQNNLHELWALLNFLLPDVFGESEVFDEWFQQNEKAQDQEIVVQ 331
Query: 425 KLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TS 483
+L +L+P +LRR+K DVEKS+ PK ET V V +T +Q ++YR +LE++ ++
Sbjct: 332 QLHAVLQPFLLRRVKADVEKSLLPKIETNVYVGMTAMQLQWYRSLLEKDIDAVNGAVGKR 391
Query: 484 ANVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 392 EGKTRLLNIVMQLRKCCNHPYLFEG 416
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 61/111 (54%), Gaps = 19/111 (17%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + LR YQ+ GLNWL+ N + ILADEMGLGKT+Q
Sbjct: 118 ESPSFVKAGKLRDYQIYGLNWLISLHENKLSGILADEMGLGKTLQ--------------- 162
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
TI L ++ F I GPF+V+ P ST+ NW+REF WT ++N IV H
Sbjct: 163 -TISFLGYL--RFIKDIDGPFIVVVPKSTLDNWKREFAKWTPEVNTIVLHG 210
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
F I GPF+V+ P ST+ NW+REF WT ++N IV HG R+ ++ +ER+
Sbjct: 172 FIKDIDGPFIVVVPKSTLDNWKREFAKWTPEVNTIVLHGDRETRTQLIEERI 223
>gi|390355907|ref|XP_003728652.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 2
[Strongylocentrotus purpuratus]
gi|390355909|ref|XP_781410.3| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 3
[Strongylocentrotus purpuratus]
Length = 1835
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 131/209 (62%), Gaps = 9/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRN ++EYE ++N+ K + ++TT+EI++ D L W + ++DEAHR
Sbjct: 629 SRNSIREYEWCVHGNRNKL-------KLNAILTTYEILLKDKAFLGAVPWAVLVVDEAHR 681
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L+ HR+L++GTPLQN++ EL+SLL+F+ P++F E F EF Q
Sbjct: 682 LKNDDSLLYKSLKEFETNHRLLITGTPLQNSLKELWSLLHFIMPERFPTWEIFEEEFSQA 741
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ L L+P +LRR+K+DVEKS+ K E ++ VE++++QK+YY+ IL RNF L
Sbjct: 742 DKNGYAS-LHQELEPFLLRRVKKDVEKSLPAKVERILRVEMSSLQKQYYKFILTRNFKAL 800
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
KG N + +N MMEL+KCC H L+
Sbjct: 801 CKG-LKGNTSSFINIMMELKKCCNHSLLI 828
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 70/116 (60%), Gaps = 21/116 (18%)
Query: 16 WVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+ L+K P Y ++ LR YQL+GLNWL SW + ILADEMGLGKTIQ
Sbjct: 526 FAALKKQPTYIGTDELELRDYQLDGLNWLAHSWCKRNSVILADEMGLGKTIQ-------- 577
Query: 74 ADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVY 128
I L+++ V + + GPFL++ PLST+ +WQREFEAW + +NV+VY
Sbjct: 578 --------VISFLSYLFNVHQ--LYGPFLIVVPLSTMTSWQREFEAWDSKMNVVVY 623
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHG 192
GPFL++ PLST+ +WQREFEAW + +NV+VY G
Sbjct: 593 GPFLIVVPLSTMTSWQREFEAWDSKMNVVVYIG 625
>gi|350638407|gb|EHA26763.1| hypothetical protein ASPNIDRAFT_35810 [Aspergillus niger ATCC 1015]
Length = 1112
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 133/209 (63%), Gaps = 7/209 (3%)
Query: 307 LFFRNDKNQ---FIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRN 362
L + DK Q I E+ L + F V IT++E+I+ + LK F W IIDEAHR+KN
Sbjct: 266 LVLQGDKEQRHKLINEELLDENFDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEE 325
Query: 363 CKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE 422
L + +R+ H +R+L++GTPLQNN++EL++LLNFL P F ++EAF F ++ +
Sbjct: 326 SSLAQIIRVFHSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDSDQD 385
Query: 423 --VNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKG 480
V +L +L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ ILE++ ++
Sbjct: 386 TVVQQLHRVLRPFLLRRVKSDVEKSLLPKKEVNLYVPMSEMQVKWYQKILEKDIDAVNGA 445
Query: 481 TTS-ANVPNLMNTMMELRKCCIHPYLLNG 508
+ L+N +M+LRKCC HPYL G
Sbjct: 446 AGKRESKTRLLNIVMQLRKCCNHPYLFEG 474
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 21/109 (19%)
Query: 20 EKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGL 79
E P K + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 179 ESPPFIKGE--MRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQ-------------- 222
Query: 80 GKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ V + I GP L+ P ST+ NW+REF WT ++NV+V
Sbjct: 223 --TISFLGYLRHVCE--ITGPHLIAVPKSTLDNWKREFGKWTPEVNVLV 267
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
I GP L+ P ST+ NW+REF WT ++NV+V G +++
Sbjct: 236 ITGPHLIAVPKSTLDNWKREFGKWTPEVNVLVLQGDKEQ 274
>gi|134055454|emb|CAK43969.1| unnamed protein product [Aspergillus niger]
Length = 1163
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 133/209 (63%), Gaps = 7/209 (3%)
Query: 307 LFFRNDKNQ---FIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRN 362
L + DK Q I E+ L + F V IT++E+I+ + LK F W IIDEAHR+KN
Sbjct: 275 LVLQGDKEQRHKLINEELLDENFDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEE 334
Query: 363 CKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE 422
L + +R+ H +R+L++GTPLQNN++EL++LLNFL P F ++EAF F ++ +
Sbjct: 335 SSLAQIIRVFHSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDSDQD 394
Query: 423 --VNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKG 480
V +L +L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ ILE++ ++
Sbjct: 395 TVVQQLHRVLRPFLLRRVKSDVEKSLLPKKEVNLYVPMSEMQVKWYQKILEKDIDAVNGA 454
Query: 481 TTS-ANVPNLMNTMMELRKCCIHPYLLNG 508
+ L+N +M+LRKCC HPYL G
Sbjct: 455 AGKRESKTRLLNIVMQLRKCCNHPYLFEG 483
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 21/109 (19%)
Query: 20 EKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGL 79
E P K + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 188 ESPPFIKGE--MRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQ-------------- 231
Query: 80 GKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ V + I GP L+ P ST+ NW+REF WT ++NV+V
Sbjct: 232 --TISFLGYLRHVCE--ITGPHLIAVPKSTLDNWKREFGKWTPEVNVLV 276
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
I GP L+ P ST+ NW+REF WT ++NV+V G +++
Sbjct: 245 ITGPHLIAVPKSTLDNWKREFGKWTPEVNVLVLQGDKEQ 283
>gi|67538946|ref|XP_663247.1| hypothetical protein AN5643.2 [Aspergillus nidulans FGSC A4]
gi|40743546|gb|EAA62736.1| hypothetical protein AN5643.2 [Aspergillus nidulans FGSC A4]
gi|259484887|tpe|CBF81492.1| TPA: SNF2 family helicase/ATPase, putative (AFU_orthologue;
AFUA_4G13460) [Aspergillus nidulans FGSC A4]
Length = 1111
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 135/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ ++++ I E+ L + F V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 277 KEERHKLINERLLDEDFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQI 336
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ + +R+L++GTPLQNN++EL++LLNFL P F ++EAF F + + + V +L
Sbjct: 337 IRVFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQEADQDTVVQQL 396
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSAN 485
+L+P +LRR+K DVEKS+ PK+E + V ++++Q K+Y+ ILE++ ++ G +
Sbjct: 397 HRVLRPFLLRRVKSDVEKSLLPKKEVNLYVPMSSMQVKWYQKILEKDIDAVNGAGGKKES 456
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 457 KTRLLNIVMQLRKCCNHPYLFEG 479
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 19/98 (19%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI + ++
Sbjct: 193 MRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQ----------------TISFIGYLR 236
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
+ I GP LV P ST+ NW+REF WT ++NV+V
Sbjct: 237 HL--CDITGPHLVAVPKSTLDNWKREFHKWTPEVNVLV 272
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
I GP LV P ST+ NW+REF WT ++NV+V G +++ + ERL
Sbjct: 241 ITGPHLVAVPKSTLDNWKREFHKWTPEVNVLVLQGDKEERHKLINERL 288
>gi|70928198|ref|XP_736346.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56510801|emb|CAH84821.1| hypothetical protein PC301253.00.0 [Plasmodium chabaudi chabaudi]
Length = 281
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 120/191 (62%), Gaps = 9/191 (4%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
+ VL+TT+EI+I D L D +W +IDEAHR+KN L +R L E+R+L++GTP
Sbjct: 89 YDVLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNDKSVLSSSVRFLKSENRLLITGTP 148
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNK-------LQLLLKPMMLRR 437
L NN+ EL+SLLNFL P+ F N+E F + F K + NK L +LKP MLRR
Sbjct: 149 LHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDNKQSEIITQLHTILKPFMLRR 208
Query: 438 LKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELR 497
LK +VE+S+ PK E + V ++ +QKK Y IL +N ++ T S N ++N + +LR
Sbjct: 209 LKVEVEQSLPPKREIYIFVGMSKLQKKLYSDILSKNIDVINAMTGSKN--QMLNILTQLR 266
Query: 498 KCCIHPYLLNG 508
KCC HPYL +G
Sbjct: 267 KCCNHPYLFDG 277
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 34/104 (32%)
Query: 51 NCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTI 110
N ILADEMGLGKT+Q+++ C L F I+ ++I P ST+
Sbjct: 10 NGILADEMGLGKTLQTISLLCYLR------------------FNKNIKRKSIIICPRSTL 51
Query: 111 PNWQREFEAWT----------------DLNVIVYHATFVVLLQT 138
NW E + W +LN V H+ + VLL T
Sbjct: 52 DNWYEEIKKWCTEMKPFKYYGSKDQRKELNRTVLHSDYDVLLTT 95
>gi|326926799|ref|XP_003209584.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Meleagris gallopavo]
Length = 1837
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 132/209 (63%), Gaps = 10/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRNM++EYE K KF+ LITT+EI++ D L +W +DEAHR
Sbjct: 573 SRNMIREYEWIHSQSKR--------LKFNALITTYEILLKDKAVLGSISWAFLGVDEAHR 624
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L HR+L++GTPLQN++ EL+SLL+F+ P++F E F + G+
Sbjct: 625 LKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKG 684
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E+ L +L+P +LRR+K+DVEKS+ K E ++ VE++ +QK+YY+ IL RN+ L
Sbjct: 685 R-ENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKAL 743
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
SKGT + +N +MEL+KCC H YL+
Sbjct: 744 SKGTR-GSTSGFLNIVMELKKCCNHCYLI 771
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 16 WVKLEKSPVYKNDNTL--RAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+V L+K P Y L R YQLEGLNWL SW + ILADEMGLGKTIQ
Sbjct: 470 FVALKKQPSYIGSENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQ-------- 521
Query: 74 ADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
TI L+++ + + GPFLV+ PLST+ +WQREFE W ++NV+VY
Sbjct: 522 --------TISFLSYL--FHQHQLYGPFLVVVPLSTLTSWQREFEVWAPEINVVVY 567
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFLV+ PLST+ +WQREFE W ++NV+VY G
Sbjct: 537 GPFLVVVPLSTLTSWQREFEVWAPEINVVVYIG 569
>gi|164426583|ref|XP_956548.2| chromatin remodelling complex ATPase chain ISW1 [Neurospora crassa
OR74A]
gi|157071396|gb|EAA27312.2| chromatin remodelling complex ATPase chain ISW1 [Neurospora crassa
OR74A]
Length = 1126
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 135/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ ++ Q I+++ + + F V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 267 KEERQQLIQDRLVDENFDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLAQV 326
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKL 426
+R+ + +R+L++GTPLQNN++EL++LLNFL P F ++EAF F GQ + + V +L
Sbjct: 327 IRVFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDRDQDTVVQQL 386
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSAN 485
+L+P +LRR+K DVEKS+ PK+E V + ++ +Q K+Y+ ILE++ ++ G +
Sbjct: 387 HRVLRPFLLRRVKSDVEKSLLPKKEVNVYIGMSEMQVKWYQKILEKDIDAVNGAGGKRES 446
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 447 KTRLLNIVMQLRKCCNHPYLFEG 469
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 58/103 (56%), Gaps = 19/103 (18%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
T+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 182 TMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQ----------------TISFLGYL 225
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
+ T GP LVI P ST+ NW+REF WT ++NV+V
Sbjct: 226 RHIMDTP--GPHLVIVPKSTLDNWKREFAKWTPEVNVLVLQGA 266
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GP LVI P ST+ NW+REF WT ++NV+V G +++ + ++RL
Sbjct: 233 GPHLVIVPKSTLDNWKREFAKWTPEVNVLVLQGAKEERQQLIQDRL 278
>gi|374109315|gb|AEY98221.1| FAFR537Wp [Ashbya gossypii FDAG1]
Length = 1025
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 130/205 (63%), Gaps = 6/205 (2%)
Query: 310 RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
R + Q I+E+ L F VLIT++E++I + LK F W+ +IDEAHR+KN L +
Sbjct: 212 RETRTQLIEERILTCDFDVLITSYEMVIKEKAILKKFAWQYIVIDEAHRIKNEQSTLSQI 271
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VN 424
+RL + + R+L++GTPLQNN++EL++LLNFL P F +E F F Q + + V
Sbjct: 272 IRLFYSKSRLLITGTPLQNNLHELWALLNFLLPDVFGESEVFDEWFQQNEKAQDQEIVVQ 331
Query: 425 KLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TS 483
+L +L+P +LRR+K DVEKS+ PK ET V V +T +Q ++YR +LE++ ++
Sbjct: 332 QLHAVLQPFLLRRVKADVEKSLLPKIETNVYVGMTAMQLQWYRSLLEKDIDAVNGAVGKR 391
Query: 484 ANVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 392 EGKTRLLNIVMQLRKCCNHPYLFEG 416
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 61/111 (54%), Gaps = 19/111 (17%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + LR YQ+ GLNWL+ N + ILADEMGLGKT+Q
Sbjct: 118 ESPSFVKAGKLRDYQIYGLNWLISLHENKLSGILADEMGLGKTLQ--------------- 162
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
TI L ++ F I GPF+V+ P ST+ NW+REF WT ++N IV H
Sbjct: 163 -TISFLGYL--RFIKDIDGPFIVVVPKSTLDNWKREFAKWTPEVNTIVLHG 210
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
F I GPF+V+ P ST+ NW+REF WT ++N IV HG R+ ++ +ER+
Sbjct: 172 FIKDIDGPFIVVVPKSTLDNWKREFAKWTPEVNTIVLHGDRETRTQLIEERI 223
>gi|390355905|ref|XP_003728651.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 1
[Strongylocentrotus purpuratus]
Length = 1865
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 131/209 (62%), Gaps = 9/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRN ++EYE ++N+ K + ++TT+EI++ D L W + ++DEAHR
Sbjct: 629 SRNSIREYEWCVHGNRNKL-------KLNAILTTYEILLKDKAFLGAVPWAVLVVDEAHR 681
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L+ HR+L++GTPLQN++ EL+SLL+F+ P++F E F EF Q
Sbjct: 682 LKNDDSLLYKSLKEFETNHRLLITGTPLQNSLKELWSLLHFIMPERFPTWEIFEEEFSQA 741
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ L L+P +LRR+K+DVEKS+ K E ++ VE++++QK+YY+ IL RNF L
Sbjct: 742 DKNGYAS-LHQELEPFLLRRVKKDVEKSLPAKVERILRVEMSSLQKQYYKFILTRNFKAL 800
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
KG N + +N MMEL+KCC H L+
Sbjct: 801 CKG-LKGNTSSFINIMMELKKCCNHSLLI 828
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 70/116 (60%), Gaps = 21/116 (18%)
Query: 16 WVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+ L+K P Y ++ LR YQL+GLNWL SW + ILADEMGLGKTIQ
Sbjct: 526 FAALKKQPTYIGTDELELRDYQLDGLNWLAHSWCKRNSVILADEMGLGKTIQ-------- 577
Query: 74 ADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVY 128
I L+++ V + + GPFL++ PLST+ +WQREFEAW + +NV+VY
Sbjct: 578 --------VISFLSYLFNVHQ--LYGPFLIVVPLSTMTSWQREFEAWDSKMNVVVY 623
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHG 192
GPFL++ PLST+ +WQREFEAW + +NV+VY G
Sbjct: 593 GPFLIVVPLSTMTSWQREFEAWDSKMNVVVYIG 625
>gi|302912567|ref|XP_003050729.1| SWI/SNF family of DNA-dependent ATPase [Nectria haematococca mpVI
77-13-4]
gi|256731667|gb|EEU45016.1| SWI/SNF family of DNA-dependent ATPase [Nectria haematococca mpVI
77-13-4]
Length = 1117
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 125/188 (66%), Gaps = 3/188 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V IT++E+++ + LK F W IIDEAHR+KN L + +RL +R+L++GT
Sbjct: 280 KFDVCITSYEMVLREKAHLKKFAWEYIIIDEAHRIKNEESSLSQVIRLFSSRNRLLITGT 339
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKLQLLLKPMMLRRLKED 441
PLQNN++EL++LLNFL P F ++EAF F GQ + + V +L +L+P +LRR+K D
Sbjct: 340 PLQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDRDQDTVVQQLHKVLRPFLLRRVKSD 399
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSANVPNLMNTMMELRKCC 500
VEKS+ PK+E V + ++ +Q K+Y+ ILE++ ++ G + L+N +M+LRKCC
Sbjct: 400 VEKSLLPKKEVNVYLGMSEMQVKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCC 459
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 460 NHPYLFEG 467
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 58/99 (58%), Gaps = 19/99 (19%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
T+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 180 TMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQ----------------TISFLGYL 223
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
+ I GP LVI P ST+ NW+REF WT +++V+V
Sbjct: 224 RHIVD--ITGPHLVIVPKSTLDNWKREFAKWTPEVDVLV 260
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
I GP LVI P ST+ NW+REF WT +++V+V G +++
Sbjct: 229 ITGPHLVIVPKSTLDNWKREFAKWTPEVDVLVLQGAKEE 267
>gi|307182228|gb|EFN69559.1| Chromodomain-helicase-DNA-binding protein 1 [Camponotus floridanus]
Length = 1831
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 134/208 (64%), Gaps = 10/208 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRN+++EYE +R K KF+V++TT+EI++ D L NW + ++DEAHR
Sbjct: 548 SRNVIREYEWCYRGSKR--------LKFNVILTTYEIVLKDKALLGALNWAVLLVDEAHR 599
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L H HR+L++GTPLQN++ EL++LL+F+ P +F + E F +
Sbjct: 600 LKNDDSLLYKALSEFHTNHRLLITGTPLQNSLKELWALLHFIMPTKFVSWEEFEKQHDNA 659
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ +KL L+P +LRR+K+DVEKS+ K E ++ VE+T++QK+YY+ IL +N+ L
Sbjct: 660 -AQKGYSKLHKQLEPFILRRVKKDVEKSLPAKIEQILRVEMTSLQKQYYKWILTKNYDAL 718
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYL 505
KG ++ +N ++EL+KCC H +L
Sbjct: 719 RKGMKGSSS-TFLNIVIELKKCCNHAFL 745
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 24/116 (20%)
Query: 18 KLEKSPVY---KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
+L + P Y + D LR YQ++G+NW++ SW + ILADEMGLGKTIQ++ C
Sbjct: 446 QLNEQPTYMGKEKDLVLRDYQMDGVNWMIHSWCKENSVILADEMGLGKTIQTI---C--- 499
Query: 75 DEMGLGKTIQSLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
F+ +F T + GPFL++ PLST+ +WQRE W D+N ++Y
Sbjct: 500 -------------FLYYLFHTQQLHGPFLLVVPLSTMTSWQREMALWAPDMNFVIY 542
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 112 NWQREFEAWTDLNVIVYHATFVVLLQTGSKFFRICLEFFVDAVFKTG-IRGPFLVIAPLS 170
NW +W N ++ + G IC +++ F T + GPFL++ PLS
Sbjct: 471 NWM--IHSWCKENSVI----LADEMGLGKTIQTICFLYYL---FHTQQLHGPFLLVVPLS 521
Query: 171 TIPNWQREFEAWT-DLNVIVYHG 192
T+ +WQRE W D+N ++Y G
Sbjct: 522 TMTSWQREMALWAPDMNFVIYLG 544
>gi|344229696|gb|EGV61581.1| chromatin remodelling complex ATPase chain ISW1 [Candida tenuis
ATCC 10573]
Length = 1062
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 127/195 (65%), Gaps = 10/195 (5%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF VL+T+FE++I + +LK F W ++DEAHR+KN L + +RL + +R+L++GT
Sbjct: 249 KFDVLVTSFEMVIREKSQLKKFKWEYIVVDEAHRIKNEESSLSQIIRLFYSRNRLLITGT 308
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF----GQLKTES-----EVNKLQLLLKPMM 434
PLQNN++EL++LLNFL P F ++E F F G+ ES V +L LL P +
Sbjct: 309 PLQNNLHELWALLNFLLPDVFGDSEVFDEWFDNQGGKENPESQDQDQVVQQLHQLLSPFL 368
Query: 435 LRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSANVPNLMNTM 493
LRR+K DVEKS+ PK ET V + +T++Q+K+YR +LE++ ++ L+N +
Sbjct: 369 LRRVKADVEKSLLPKIETNVYIGMTDMQRKWYRQLLEKDIDAVNGAVGKREGKTRLLNIV 428
Query: 494 MELRKCCIHPYLLNG 508
M+LRKCC HPYL +G
Sbjct: 429 MQLRKCCNHPYLFDG 443
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 20/108 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
++P Y + LR YQ++GLNWL+ + N + ILADEMGLGKT+Q+++ +G
Sbjct: 141 ETPSYVH-GKLRDYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISF-------LGYL 192
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
+ I+ I GPF+VI P ST+ NW+REF WT ++NV+V
Sbjct: 193 RYIKH-----------IDGPFVVIVPKSTLDNWRREFAKWTPEVNVVV 229
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
I GPF+VI P ST+ NW+REF WT ++NV+V G +++
Sbjct: 198 IDGPFVVIVPKSTLDNWRREFAKWTPEVNVVVLQGNKEQ 236
>gi|115389802|ref|XP_001212406.1| chromatin remodelling complex ATPase chain ISW1 [Aspergillus
terreus NIH2624]
gi|114194802|gb|EAU36502.1| chromatin remodelling complex ATPase chain ISW1 [Aspergillus
terreus NIH2624]
Length = 1119
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 133/203 (65%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ ++++ I E+ L + F V IT++E+++ + LK F W IIDEAHR+KN L +
Sbjct: 276 KEERHKLINERLLDEDFDVCITSYEMVLREKSHLKKFAWEYIIIDEAHRIKNEESSLSQI 335
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ H +R+L++GTPLQNN++EL++LLNFL P F ++EAF F ++ + V +L
Sbjct: 336 IRVFHSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSSQDSDQDTVVQQL 395
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTS-AN 485
+L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ ILE++ ++ +
Sbjct: 396 HRVLRPFLLRRVKSDVEKSLLPKKEVNLYVPMSEMQVKWYQKILEKDIDAVNGAAGKRES 455
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 456 KTRLLNIVMQLRKCCNHPYLFEG 478
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 62/108 (57%), Gaps = 20/108 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + N +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 183 ESPPFVN-GEMRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQ--------------- 226
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ V I GP LV P ST+ NW+REF+ WT ++NV+V
Sbjct: 227 -TISFLGYLRHV--CDIPGPHLVAVPKSTLDNWKREFQKWTPEVNVLV 271
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
I GP LV P ST+ NW+REF+ WT ++NV+V G +++ + ERL
Sbjct: 240 IPGPHLVAVPKSTLDNWKREFQKWTPEVNVLVLQGDKEERHKLINERL 287
>gi|312378128|gb|EFR24784.1| hypothetical protein AND_10400 [Anopheles darlingi]
Length = 2623
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 135/209 (64%), Gaps = 14/209 (6%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+++YE F K KF+ ++TT+EI++ D L +W ++DEAHR
Sbjct: 664 SREMIRQYEWCFDRTKK--------LKFNAILTTYEILLKDKTFLGSISWASLLVDEAHR 715
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L+ HR+L++GTPLQN++ EL++LL+F+ PQ+F ++F +G
Sbjct: 716 LKNDDSLLYKALKEFDTNHRLLITGTPLQNSLKELWALLHFIMPQRFETWDSFERNYGND 775
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
K+ +E++K L+P +LRR+K+DVEKS+ K E ++ VE+T+IQ++YYR IL RNF L
Sbjct: 776 KSYTELHK---ELEPYILRRVKKDVEKSLPAKVEQILRVEMTSIQRQYYRWILTRNFDAL 832
Query: 478 SKG-TTSANVPNLMNTMMELRKCCIHPYL 505
KG SAN +N ++EL+KCC H L
Sbjct: 833 RKGLKGSANT--FLNIVIELKKCCNHAML 859
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 60/100 (60%), Gaps = 21/100 (21%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR YQ++GLNWL+ +W + ILADEMGLGKTIQ++ C F+
Sbjct: 578 LRDYQMDGLNWLILTWCKKNSVILADEMGLGKTIQTI---C----------------FLY 618
Query: 91 AVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
+FK+ + GPFL + PLST+P WQREF W ++N + Y
Sbjct: 619 YLFKSQQLYGPFLCVVPLSTMPAWQREFAIWAPEMNFVTY 658
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 139 GSKFFRICLEFFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
G IC +++ FK+ + GPFL + PLST+P WQREF W ++N + Y G
Sbjct: 608 GKTIQTICFLYYL---FKSQQLYGPFLCVVPLSTMPAWQREFAIWAPEMNFVTYLG 660
>gi|367030403|ref|XP_003664485.1| chromatin-remodeling complex ATPase-like protein [Myceliophthora
thermophila ATCC 42464]
gi|347011755|gb|AEO59240.1| chromatin-remodeling complex ATPase-like protein [Myceliophthora
thermophila ATCC 42464]
Length = 1125
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 125/187 (66%), Gaps = 3/187 (1%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V IT++E+I+ + LK F W IIDEAHR+KN L + +R+ + +R+L++GTP
Sbjct: 286 FDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLAQVIRMFNSRNRLLITGTP 345
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKLQLLLKPMMLRRLKEDV 442
LQNN++EL++LLNFL P F ++EAF F GQ + + V +L +L+P +LRR+K DV
Sbjct: 346 LQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDRDQDTVVQQLHRVLRPFLLRRVKSDV 405
Query: 443 EKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSANVPNLMNTMMELRKCCI 501
EKS+ PK+E V + ++ +Q K+Y+ ILE++ ++ G + L+N +M+LRKCC
Sbjct: 406 EKSLLPKKEINVYIGMSEMQVKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCN 465
Query: 502 HPYLLNG 508
HPYL G
Sbjct: 466 HPYLFEG 472
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 59/103 (57%), Gaps = 19/103 (18%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
T+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 185 TMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQ----------------TIAFLGYL 228
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
+ GI GP LV P ST+ NW+REFE WT ++NV+V
Sbjct: 229 RHIM--GITGPHLVTVPKSTLDNWKREFEKWTPEVNVLVLQGA 269
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP LV P ST+ NW+REFE WT ++NV+V G +++ + +RL
Sbjct: 233 GITGPHLVTVPKSTLDNWKREFEKWTPEVNVLVLQGAKEERHQLINDRL 281
>gi|407916946|gb|EKG10274.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 1119
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 135/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++++ Q I E+ + + F V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 272 KDERQQLINERLVDEGFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQI 331
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG--QLKTESEVNKL 426
+R+ + +R+L++GTPLQNN++EL++LLNFL P F ++EAF F Q ++ V +L
Sbjct: 332 IRVFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQQEDQDTVVQQL 391
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSAN 485
+L+P +LRR+K DVEKS+ PK+E + + ++ +Q ++Y+ ILE++ ++ G +
Sbjct: 392 HKVLRPFLLRRVKSDVEKSLLPKKEVNLYIGMSEMQVQWYKKILEKDIDAVNGAGGKKES 451
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL +G
Sbjct: 452 KTRLLNIVMQLRKCCNHPYLFDG 474
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 66/127 (51%), Gaps = 20/127 (15%)
Query: 6 KPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQ 65
+ +K A D +SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 164 REEKHGGAGDLTIFRESPPFIQ-GVMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQ 222
Query: 66 SLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLN 124
+++ I L FV GI GP LV P ST+ NW+REF W ++N
Sbjct: 223 TIS-------------FIGYLRFV-----RGITGPHLVAVPKSTLDNWKREFAKWIPEIN 264
Query: 125 VIVYHAT 131
V+V
Sbjct: 265 VLVLQGA 271
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
F GI GP LV P ST+ NW+REF W ++NV+V G + + + ERL
Sbjct: 232 FVRGITGPHLVAVPKSTLDNWKREFAKWIPEINVLVLQGAKDERQQLINERL 283
>gi|363737795|ref|XP_413879.3| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 2 [Gallus gallus]
Length = 1837
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 132/209 (63%), Gaps = 10/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRNM++EYE K KF+ LITT+EI++ D L +W +DEAHR
Sbjct: 573 SRNMIREYEWIHSQSKR--------LKFNALITTYEILLKDKAVLGSISWAFLGVDEAHR 624
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L HR+L++GTPLQN++ EL+SLL+F+ P++F E F + G+
Sbjct: 625 LKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKG 684
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E+ L +L+P +LRR+K+DVEKS+ K E ++ VE++ +QK+YY+ IL RN+ L
Sbjct: 685 R-ENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKAL 743
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
SKGT + +N +MEL+KCC H YL+
Sbjct: 744 SKGTR-GSTSGFLNIVMELKKCCNHCYLI 771
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 16 WVKLEKSPVYKNDNTL--RAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+V L+K P Y L R YQLEGLNWL SW + ILADEMGLGKTIQ
Sbjct: 470 FVALKKQPSYIGSENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQ-------- 521
Query: 74 ADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
TI L+++ + + GPFLV+ PLST+ +WQREFE W ++NV+VY
Sbjct: 522 --------TISFLSYL--FHQHQLYGPFLVVVPLSTLTSWQREFEVWAPEINVVVY 567
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFLV+ PLST+ +WQREFE W ++NV+VY G
Sbjct: 537 GPFLVVVPLSTLTSWQREFEVWAPEINVVVYIG 569
>gi|406868733|gb|EKD21770.1| chromatin remodelling complex ATPase chain ISW1 [Marssonina brunnea
f. sp. 'multigermtubi' MB_m1]
Length = 1584
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 125/188 (66%), Gaps = 3/188 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V IT++E+I+ + LK F W IIDEAHR+KN L + +RL + +R+L++GT
Sbjct: 287 KFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSRNRLLITGT 346
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQ-LKTESEVNKLQLLLKPMMLRRLKED 441
PLQNN++EL++LLNFL P F EAF F GQ ++ V +L +L+P +LRR+K D
Sbjct: 347 PLQNNLHELWALLNFLLPDVFGEAEAFDQWFSGQGADQDTVVQQLHRVLRPFLLRRVKSD 406
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSANVPNLMNTMMELRKCC 500
VEKS+ PK+E + + ++++Q K+Y+ ILE++ ++ G + L+N +M+LRKCC
Sbjct: 407 VEKSLLPKKEINLYIGMSDMQVKWYKKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCC 466
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 467 NHPYLFEG 474
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 19/108 (17%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 178 ESPGFIQGGEMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQ--------------- 222
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ + I GP LV+ P ST+ NW+REF WT ++NV+V
Sbjct: 223 -TISFLGYLRHIMD--ITGPHLVVVPKSTLDNWKREFAKWTPEVNVLV 267
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
I GP LV+ P ST+ NW+REF WT ++NV+V G
Sbjct: 236 ITGPHLVVVPKSTLDNWKREFAKWTPEVNVLVLQG 270
>gi|241949239|ref|XP_002417342.1| chromatin remodelling complex ATPase chain ISW1, pseudogene,
putative [Candida dubliniensis CD36]
gi|223640680|emb|CAX44987.1| chromatin remodelling complex ATPase chain ISW1, pseudogene,
putative [Candida dubliniensis CD36]
Length = 1017
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 129/192 (67%), Gaps = 9/192 (4%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V+I+++EI+I + LK F+W+ IIDEAHR+KN L + +R+ H ++R+L++GTP
Sbjct: 232 FDVIISSYEIVIREKATLKKFDWQYIIIDEAHRIKNEESLLSQIIRMFHSKNRLLITGTP 291
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE-------VNKLQLLLKPMMLRR 437
LQNN+ EL++LLNF+ P F+ NE+F E+ Q + +E V++L +LKP +LRR
Sbjct: 292 LQNNLRELWALLNFIVPDVFAENESF-DEWFQKDSNNENGGEDQVVSQLHKVLKPFLLRR 350
Query: 438 LKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSANVPNLMNTMMEL 496
+K DVEKS+ PK+E V V+++ +QK Y+ ILE++ ++ + L+N +M+L
Sbjct: 351 IKADVEKSLLPKKELNVYVKMSPMQKNLYQKILEKDIDAVNGANGKKESKTRLLNIVMQL 410
Query: 497 RKCCIHPYLLNG 508
RKCC HPYL G
Sbjct: 411 RKCCNHPYLFEG 422
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 64/116 (55%), Gaps = 20/116 (17%)
Query: 13 ASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCI 72
S ++ +SP Y + LR YQ++GLNWL+ N + ILADEMGLGKT+Q
Sbjct: 115 TSSILEFTESPGYVH-GQLRPYQIQGLNWLISLHENNLSGILADEMGLGKTLQ------- 166
Query: 73 LADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ F GI GP LVI P ST+ NWQREF W D+ V+V
Sbjct: 167 ---------TISFLGYL--RFIRGINGPHLVITPKSTLDNWQREFNRWIPDIKVLV 211
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F GI GP LVI P ST+ NWQREF W D+ V+V G +
Sbjct: 176 FIRGINGPHLVITPKSTLDNWQREFNRWIPDIKVLVLQGDK 216
>gi|410903295|ref|XP_003965129.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Takifugu rubripes]
Length = 1689
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 132/210 (62%), Gaps = 10/210 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
+SRNM++ +E + K KF++L+TT+EI++ D L NW +DEAH
Sbjct: 557 SSRNMIRTHEWIHVHSKK--------MKFNILLTTYEILLKDKSFLGSVNWAFIGVDEAH 608
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN + L + + HR+L++GTPLQN++ EL+SLL+F+ P +F + E F E G+
Sbjct: 609 RLKNDDSLLYKTMMEFKSNHRLLITGTPLQNSLKELWSLLHFIMPDKFHSWELFEEEHGK 668
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
+ +S L L+P +LRR+K+DVEKS+ K E ++ VE++ IQK+YY+ IL RN+
Sbjct: 669 GR-DSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQYYKWILTRNYKA 727
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
LSKG + +N MMEL+KCC H YL+
Sbjct: 728 LSKG-VKGSTSGFLNIMMELKKCCNHCYLI 756
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 71/116 (61%), Gaps = 22/116 (18%)
Query: 16 WVKLEKSPVYKNDN-TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
+V ++K P + +D LR YQL+GLNW+ SW G +CILADEMG
Sbjct: 456 FVPMKKQPSFIDDGLELRDYQLDGLNWMAHSWCKGNSCILADEMG--------------- 500
Query: 75 DEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
LGKTIQ++ F++ +F + + GPFL++ PLST+ +WQRE + W +NV+VY
Sbjct: 501 ----LGKTIQTICFLNYMFNEHQLYGPFLLVVPLSTLTSWQREIQLWAPQMNVVVY 552
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFL++ PLST+ +WQRE + W +NV+VY G
Sbjct: 522 GPFLLVVPLSTLTSWQREIQLWAPQMNVVVYLG 554
>gi|157107192|ref|XP_001649666.1| chromodomain helicase DNA binding protein [Aedes aegypti]
gi|108879647|gb|EAT43872.1| AAEL004716-PB [Aedes aegypti]
Length = 2001
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 132/209 (63%), Gaps = 10/209 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR ++++YE F N K KF+ ++TT+EI++ D L +W + ++DEAH
Sbjct: 662 ASREIIRQYEWCFPNQK---------LKFNAILTTYEILLKDKTFLGSVSWAVLLVDEAH 712
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN + L + L +R+L++GTPLQN++ EL++LL+F+ P +F E+F +G
Sbjct: 713 RLKNDDSLLYKALEEFDTNYRLLITGTPLQNSLKELWALLHFIMPNRFDTWESFERLYGN 772
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
+ KL L+P +LRR+K+DVEKS+ K E ++ VE+T++Q++YYR IL +NF
Sbjct: 773 TSNDKSYTKLHKELEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQRQYYRWILTKNFDA 832
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYL 505
L KGT + + +N M+EL+KCC H L
Sbjct: 833 LRKGTKGS-INTFLNIMIELKKCCNHALL 860
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 59/100 (59%), Gaps = 21/100 (21%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR YQ++GLNWL+ +W + ILADEMGLGKTIQ++ C F+
Sbjct: 577 LRDYQMDGLNWLVLTWCKENSVILADEMGLGKTIQTI---C----------------FLY 617
Query: 91 AVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
+FK + GPFL + PLST+ WQREF W ++NV+ Y
Sbjct: 618 YLFKAQQLYGPFLCVVPLSTMTAWQREFAIWAPEMNVVTY 657
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 139 GSKFFRICLEFFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
G IC +++ FK + GPFL + PLST+ WQREF W ++NV+ Y G
Sbjct: 607 GKTIQTICFLYYL---FKAQQLYGPFLCVVPLSTMTAWQREFAIWAPEMNVVTYLG 659
>gi|408396976|gb|EKJ76127.1| hypothetical protein FPSE_03602 [Fusarium pseudograminearum CS3096]
Length = 1114
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 125/188 (66%), Gaps = 3/188 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V IT++E+++ + LK F W IIDEAHR+KN L + +RL +R+L++GT
Sbjct: 280 KFDVCITSYEMVLREKSHLKKFAWEYIIIDEAHRIKNEESSLSQVIRLFDSRNRLLITGT 339
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKLQLLLKPMMLRRLKED 441
PLQNN++EL++LLNFL P F ++EAF F GQ + + V +L +L+P +LRR+K D
Sbjct: 340 PLQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDRDQDTVVQQLHRVLRPFLLRRVKSD 399
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSANVPNLMNTMMELRKCC 500
VEKS+ PK+E V + ++ +Q K+Y+ ILE++ ++ G + L+N +M+LRKCC
Sbjct: 400 VEKSLLPKKEVNVYLGMSEMQVKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCC 459
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 460 NHPYLFEG 467
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 57/102 (55%), Gaps = 19/102 (18%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 181 MRDYQIAGLNWLISLHENGISGILADEMGLGKTLQ----------------TISFLGYLR 224
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
+ I GP LVI P ST+ NW+REF WT +++V+V
Sbjct: 225 HILD--ITGPHLVIVPKSTLDNWKREFAKWTPEVDVLVLQGA 264
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
I GP LVI P ST+ NW+REF WT +++V+V G
Sbjct: 229 ITGPHLVIVPKSTLDNWKREFAKWTPEVDVLVLQG 263
>gi|157107190|ref|XP_001649665.1| chromodomain helicase DNA binding protein [Aedes aegypti]
gi|108879646|gb|EAT43871.1| AAEL004716-PA [Aedes aegypti]
Length = 2002
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/209 (40%), Positives = 132/209 (63%), Gaps = 10/209 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR ++++YE F N K KF+ ++TT+EI++ D L +W + ++DEAH
Sbjct: 662 ASREIIRQYEWCFPNQK---------LKFNAILTTYEILLKDKTFLGSVSWAVLLVDEAH 712
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN + L + L +R+L++GTPLQN++ EL++LL+F+ P +F E+F +G
Sbjct: 713 RLKNDDSLLYKALEEFDTNYRLLITGTPLQNSLKELWALLHFIMPNRFDTWESFERLYGN 772
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
+ KL L+P +LRR+K+DVEKS+ K E ++ VE+T++Q++YYR IL +NF
Sbjct: 773 TSNDKSYTKLHKELEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQRQYYRWILTKNFDA 832
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYL 505
L KGT + + +N M+EL+KCC H L
Sbjct: 833 LRKGTKGS-INTFLNIMIELKKCCNHALL 860
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 59/100 (59%), Gaps = 21/100 (21%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR YQ++GLNWL+ +W + ILADEMGLGKTIQ++ C F+
Sbjct: 577 LRDYQMDGLNWLVLTWCKENSVILADEMGLGKTIQTI---C----------------FLY 617
Query: 91 AVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
+FK + GPFL + PLST+ WQREF W ++NV+ Y
Sbjct: 618 YLFKAQQLYGPFLCVVPLSTMTAWQREFAIWAPEMNVVTY 657
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 139 GSKFFRICLEFFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
G IC +++ FK + GPFL + PLST+ WQREF W ++NV+ Y G
Sbjct: 607 GKTIQTICFLYYL---FKAQQLYGPFLCVVPLSTMTAWQREFAIWAPEMNVVTYLG 659
>gi|168060035|ref|XP_001782004.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162666495|gb|EDQ53147.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1445
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 125/190 (65%), Gaps = 3/190 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF+ L+TT+E+++ D L W ++DEAHRLKN L L+ +++VL++GT
Sbjct: 521 KFNTLLTTYEVVLKDKAVLSKIKWCYLMVDEAHRLKNCEASLYTTLQEFSTKNKVLVTGT 580
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKT--ESEVNKLQLLLKPMMLRRLKED 441
PLQN+V EL++LL+FL+ +F + E F + L + E E+ L L+P +LRR+ +D
Sbjct: 581 PLQNSVEELWALLHFLDSDKFKSKEHFTEHYKNLSSFDEKELANLHAELRPHLLRRIIKD 640
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCI 501
VEKS+ PK E ++ VE++ +QK+YY+ ILERNF+ L+KG N +L+N ++EL+KCC
Sbjct: 641 VEKSLPPKIERILRVEMSPLQKQYYKWILERNFNDLNKG-VRVNQVSLLNIVVELKKCCN 699
Query: 502 HPYLLNGKTY 511
HP+L Y
Sbjct: 700 HPFLFESADY 709
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 67/112 (59%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KLE+ P + TLR YQLEGLN+LM SW N N ILADEMGLGKT+QS
Sbjct: 403 KLEEQPEWLKGGTLRDYQLEGLNFLMNSWRNDTNVILADEMGLGKTVQS----------- 451
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVY 128
+ L F+ + I GPFLV+ PLSTI NW +EF W D+NV+VY
Sbjct: 452 -----VSMLGFLQ--YAQQIPGPFLVVVPLSTITNWAKEFRKWLPDMNVVVY 496
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
+ I GPFLV+ PLSTI NW +EF W D+NV+VY G R
Sbjct: 460 YAQQIPGPFLVVVPLSTITNWAKEFRKWLPDMNVVVYVGNR 500
>gi|67609421|ref|XP_666977.1| chromodomain-helicase-DNA-binding protein, CHD-1-related
[Cryptosporidium hominis TU502]
gi|54658055|gb|EAL36743.1| chromodomain-helicase-DNA-binding protein, CHD-1-related
[Cryptosporidium hominis]
Length = 2025
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 179/361 (49%), Gaps = 70/361 (19%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPK 217
I PFLV+ P ST NW REF+ W D NV++YHG +E +R
Sbjct: 544 IVAPFLVVVPQSTSDNWLREFKKWLPDANVVLYHGNAYA-----RELIR----------- 587
Query: 218 DGEVLYGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLLDLAGGD 277
E K+E G + E L + + + + ++ ++ AR GG+
Sbjct: 588 ----------SYELSKIEMKDEVDENGNYNENLESKDEVHNYNQKGMQSCARAG--TGGN 635
Query: 278 GKSFSPTMSSGTDGLKSASASRNMLQEYELFFRNDKNQFIKE-KDLYKFHVLITTFEIII 336
G FFR +++ K+ + Y+F ++ITT I+
Sbjct: 636 G-----------------------------FFRRCRSRSSKQTRKRYRFDIVITTPSILN 666
Query: 337 S--DCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFS 394
S DC L+ +W + I+DEAH+LKNR+ K + L +R+LLSGTPL NN+ EL+S
Sbjct: 667 SQVDCDFLRQIDWYMMIVDEAHQLKNRDSKRFKELHEFGTMYRLLLSGTPLHNNLEELWS 726
Query: 395 LLNFLEPQQFSNNEAFMSEFGQLKT--------ESEVNKLQLLLKPMMLRRLKEDVEKSI 446
LL+FL P +F N + F + ++ + ++ LQ L+ +LRR+K+DVEKS+
Sbjct: 727 LLHFLNPLRFQNYQEFRLRYPDIENPNVIGPDKQRQLEDLQSELQEYVLRRVKKDVEKSL 786
Query: 447 APKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
K E ++ VEL+ Q Y+ IL RN+ LSK TT +L N MEL+K C HP+L+
Sbjct: 787 PNKVERILRVELSPQQTDMYKSILTRNYDELSK-TTGGTKTSLQNICMELKKVCNHPFLI 845
Query: 507 N 507
+
Sbjct: 846 H 846
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 19/102 (18%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
TLR YQ+ GLNW++ + N +LADEMGLGKT+Q+++
Sbjct: 495 TLRDYQIYGLNWMISRFKKNVNILLADEMGLGKTVQTIS------------------VVG 536
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHA 130
++ I PFLV+ P ST NW REF+ W D NV++YH
Sbjct: 537 HCLYMEKIVAPFLVVVPQSTSDNWLREFKKWLPDANVVLYHG 578
>gi|212534786|ref|XP_002147549.1| SNF2 family helicase/ATPase, putative [Talaromyces marneffei ATCC
18224]
gi|210069948|gb|EEA24038.1| SNF2 family helicase/ATPase, putative [Talaromyces marneffei ATCC
18224]
Length = 1115
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 134/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEK-DLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ ++++ I E+ + F V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 270 KEERHELITERLEKEDFDVCITSYEMILKEKSHLKKFAWEYIIIDEAHRIKNEESSLAQI 329
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ H +R+L++GTPLQNN++EL++LLNFL P F +++AF F +++ + V +L
Sbjct: 330 IRVFHSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDAFDQWFSNQESDQDTVVQQL 389
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSAN 485
+L+P +LRR+K DVEKS+ PK+E + V ++++Q K+Y+ ILE++ ++ +
Sbjct: 390 HRVLRPFLLRRVKSDVEKSLLPKKEVNLFVGMSDMQVKWYQKILEKDIDAVNGAAGKRES 449
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 450 KTRLLNIVMQLRKCCNHPYLFEG 472
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 19/102 (18%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 186 MRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQ----------------TISFLGYLR 229
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
+ GI GP L+ P ST+ NW+ EF WT ++NV+V +
Sbjct: 230 HI--CGITGPHLIAVPKSTLHNWKMEFAKWTPEVNVMVLQGS 269
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP L+ P ST+ NW+ EF WT ++NV+V G +++ ERL
Sbjct: 233 GITGPHLIAVPKSTLHNWKMEFAKWTPEVNVMVLQGSKEERHELITERL 281
>gi|46137507|ref|XP_390445.1| hypothetical protein FG10269.1 [Gibberella zeae PH-1]
Length = 1114
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 125/188 (66%), Gaps = 3/188 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V IT++E+++ + LK F W IIDEAHR+KN L + +RL +R+L++GT
Sbjct: 280 KFDVCITSYEMVLREKSHLKKFAWEYIIIDEAHRIKNEESSLSQVIRLFDSRNRLLITGT 339
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKLQLLLKPMMLRRLKED 441
PLQNN++EL++LLNFL P F ++EAF F GQ + + V +L +L+P +LRR+K D
Sbjct: 340 PLQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDRDQDTVVQQLHRVLRPFLLRRVKSD 399
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSANVPNLMNTMMELRKCC 500
VEKS+ PK+E V + ++ +Q K+Y+ ILE++ ++ G + L+N +M+LRKCC
Sbjct: 400 VEKSLLPKKEVNVYLGMSEMQVKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCC 459
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 460 NHPYLFEG 467
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 19/98 (19%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 181 MRDYQIAGLNWLISLHENGISGILADEMGLGKTLQ----------------TISFLGYLR 224
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
+ I GP LVI P ST+ NW+REF WT +++V+V
Sbjct: 225 HILD--ITGPHLVIVPKSTLDNWKREFAKWTPEVDVLV 260
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
I GP LVI P ST+ NW+REF WT +++V+V G
Sbjct: 229 ITGPHLVIVPKSTLDNWKREFAKWTPEVDVLVLQG 263
>gi|50293735|ref|XP_449279.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528592|emb|CAG62253.1| unnamed protein product [Candida glabrata]
Length = 1476
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 132/213 (61%), Gaps = 9/213 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR++ +EYE F+ N K K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 477 SRDIEREYE-FYSNPKG---KGKKQIKFNVLMTTYEYILKDRAELGSIKWQFLAVDEAHR 532
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 533 LKNAESSLYESLNSFKVANRLLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDE 592
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E + L L+P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+S L
Sbjct: 593 EQEQYIRDLHKRLQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSAL 652
Query: 478 SKGTTSA--NVPNLMNTMMELRKCCIHPYLLNG 508
+ G ++ N+MNT+M K HPYL +
Sbjct: 653 TAGAKGGRFSMLNIMNTLM---KASNHPYLFDS 682
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + LR +QL G+NW+ F W N ILADEMGLGKT+Q
Sbjct: 378 KLSVQPPFIKGGELRDFQLTGINWMAFLWSKNDNGILADEMGLGKTVQ------------ 425
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ +F GP LV+ PLST+P W FE W D++VI Y
Sbjct: 426 ----TVAFISWL--IFARRQNGPHLVVVPLSTMPAWIETFEKWAPDIDVICY 471
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKER 204
+F GP LV+ PLST+P W FE W D++VI Y G +K RD ER
Sbjct: 434 IFARRQNGPHLVVVPLSTMPAWIETFEKWAPDIDVICYMGNQKS---RDIER 482
>gi|50285639|ref|XP_445248.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524552|emb|CAG58154.1| unnamed protein product [Candida glabrata]
Length = 1115
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 124/189 (65%), Gaps = 5/189 (2%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V+I ++EIII + + NW +IDEAHR+KN L + LR H ++R+L++GTP
Sbjct: 275 FDVVIASYEIIIREKAAFRKMNWEYIMIDEAHRIKNEESMLSQVLREFHSKNRLLITGTP 334
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLKE 440
LQNN++EL++LLNFL P FS+++ F F + E + V +L +L+P +LRR+K
Sbjct: 335 LQNNLHELWALLNFLLPDIFSDSQDFDEWFSKETDEEDQEKIVKQLHTVLQPFLLRRIKS 394
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPN-LMNTMMELRKC 499
DVE S+ PK+E V V ++ +QKK+YR ILE++ ++ + S L+N +M+LRKC
Sbjct: 395 DVETSLLPKKELNVYVGMSPMQKKWYRQILEKDIDAVNADSGSKESKTRLLNIVMQLRKC 454
Query: 500 CIHPYLLNG 508
C HPYL +G
Sbjct: 455 CNHPYLFDG 463
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 56/101 (55%), Gaps = 19/101 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP Y N LR YQ++GLNWL+ N ILADEMGLGKT+Q
Sbjct: 166 ESPAYIN-GQLRDYQVQGLNWLVSLDKNRIAGILADEMGLGKTLQ--------------- 209
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT 121
TI L ++ + K I GPFLVIAP ST+ NW RE WT
Sbjct: 210 -TISFLGYLRYIKK--IPGPFLVIAPKSTLNNWLREINKWT 247
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERLRLKYVAADY 214
I GPFLVIAP ST+ NW RE WT ++N + G +++ +R ++ K++A D+
Sbjct: 223 IPGPFLVIAPKSTLNNWLREINKWTPEVNAFILQGDKEERAR----LIQDKFMACDF 275
>gi|68483984|ref|XP_714082.1| hypothetical protein CaO19.11916 [Candida albicans SC5314]
gi|68484390|ref|XP_713881.1| hypothetical protein CaO19.4437 [Candida albicans SC5314]
gi|46435400|gb|EAK94782.1| hypothetical protein CaO19.4437 [Candida albicans SC5314]
gi|46435612|gb|EAK94990.1| hypothetical protein CaO19.11916 [Candida albicans SC5314]
Length = 859
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 137/208 (65%), Gaps = 10/208 (4%)
Query: 310 RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++++ + IK K + F V+++++EI+I + LK F+W+ IIDEAHR+KN L +
Sbjct: 58 KDERAELIKNKVMTCDFDVIVSSYEIVIREKATLKKFDWQYIIIDEAHRIKNEESLLSQI 117
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE------ 422
+R+ H +R+L++GTPLQNN+ EL++LLNF+ P F+ NE+F E+ Q + +E
Sbjct: 118 IRMFHSRNRLLITGTPLQNNLRELWALLNFIVPDVFAENESF-DEWFQKDSNNENGGEDQ 176
Query: 423 -VNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT 481
V++L +LKP +LRR+K DVEKS+ PK+E V V+++ +QK Y+ ILE++ ++
Sbjct: 177 VVSQLHKVLKPFLLRRIKADVEKSLLPKKELNVYVKMSPMQKNLYQKILEKDIDAVNGAN 236
Query: 482 -TSANVPNLMNTMMELRKCCIHPYLLNG 508
+ L+N +M+LRKCC HPYL G
Sbjct: 237 GKKESKTRLLNIVMQLRKCCNHPYLFEG 264
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 77 MGLGKTIQSLTFVDAV-FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
MGLGKT+Q+++F+ + F GI GP LVI P ST+ NWQREF W D+ V+V
Sbjct: 1 MGLGKTLQTISFLGYLRFIRGINGPHLVITPKSTLDNWQREFNRWIPDIKVLV 53
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F GI GP LVI P ST+ NWQREF W D+ V+V G +
Sbjct: 18 FIRGINGPHLVITPKSTLDNWQREFNRWIPDIKVLVLQGDK 58
>gi|431891661|gb|ELK02262.1| Chromodomain-helicase-DNA-binding protein 2 [Pteropus alecto]
Length = 895
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 131/209 (62%), Gaps = 10/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRN ++EYE K KF+ LITT+EI++ D L NW +DEAHR
Sbjct: 548 SRNTIREYEWIHSQTKR--------LKFNALITTYEILLKDKTVLGSINWAFLGVDEAHR 599
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L HR+L++GTPLQN++ EL+SLL+F+ P++F E F + G+
Sbjct: 600 LKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKG 659
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E+ L +L+P +LRR+K+DVEKS+ K E ++ VE++ +QK+YY+ IL RN+ L
Sbjct: 660 R-ENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKAL 718
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+KGT + +N +MEL+KCC H YL+
Sbjct: 719 AKGTR-GSTSGFLNIVMELKKCCNHCYLI 746
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 69/117 (58%), Gaps = 23/117 (19%)
Query: 16 WVKLEKSPVYKNDNTL--RAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+V L+K P Y L R YQLEGLNWL SW + ILADEMG
Sbjct: 445 FVALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMG-------------- 490
Query: 74 ADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
LGKTIQ+++F+ +F + + GPFL++ PLST+ +WQREFE W ++NV+VY
Sbjct: 491 -----LGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVY 542
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFL++ PLST+ +WQREFE W ++NV+VY G
Sbjct: 512 GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIG 544
>gi|340939504|gb|EGS20126.1| complex ATPase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1137
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 135/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ +++Q I ++ + + F V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 269 KEERHQLINDRLIDEDFDVCITSYEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLSQV 328
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKL 426
+R+ +R+L++GTPLQNN++EL++LLNFL P F +++AF F GQ + + + V +L
Sbjct: 329 IRMFSSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSDAFDQWFRGQDRDQDQVVQQL 388
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSAN 485
+L+P +LRR+K DVEKS+ PK+E V + ++ +Q K+Y+ ILE++ ++ G +
Sbjct: 389 HRVLRPFLLRRVKSDVEKSLLPKKEINVYIGMSEMQVKWYKKILEKDIDAVNGAGGKRES 448
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 449 KTRLLNIVMQLRKCCNHPYLFEG 471
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 61/103 (59%), Gaps = 19/103 (18%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
T+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q+++ +G + IQ
Sbjct: 184 TMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISF-------LGYLRHIQ----- 231
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
GI GP LV P ST+ NW+REFE WT D+NV+V
Sbjct: 232 ------GITGPHLVAVPKSTLDNWKREFEKWTPDVNVLVLQGA 268
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP LV P ST+ NW+REFE WT D+NV+V G +++ + +RL
Sbjct: 232 GITGPHLVAVPKSTLDNWKREFEKWTPDVNVLVLQGAKEERHQLINDRL 280
>gi|393244885|gb|EJD52396.1| transcription regulator [Auricularia delicata TFB-10046 SS5]
Length = 1435
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 131/214 (61%), Gaps = 8/214 (3%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
S +R++++ YE F + ++ K KF+VL+TT+E+++ D EL W +DEA
Sbjct: 453 SRARSIIRHYE-FGQTGGHK----KPQLKFNVLLTTYELVLKDASELSGIKWLALAVDEA 507
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN +L E LR ++L++GTPLQNNV EL +L++FL P++F F +
Sbjct: 508 HRLKNHESQLYEALRAFSASSKLLITGTPLQNNVKELLALMHFLMPERFPLTNDF--DLN 565
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
ES++ +L L+ +MLRRLK DV KS+ K+E ++ VE++ +Q YY+ IL +NF+
Sbjct: 566 DADHESKIKELHSQLEGLMLRRLKRDVIKSLPTKKEQILRVEMSTLQTHYYKNILTKNFT 625
Query: 476 FLSKGTTSANVP-NLMNTMMELRKCCIHPYLLNG 508
LSKG +L+N MEL+K HPYL +G
Sbjct: 626 ALSKGAAGGGGHISLLNIAMELKKAANHPYLFDG 659
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 58/103 (56%), Gaps = 19/103 (18%)
Query: 29 NTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTF 88
N L+ +QL GLNWL + W NG N ILADEMGLGKT+QS+ L M + L
Sbjct: 367 NQLKDFQLTGLNWLAYLWHNGENGILADEMGLGKTVQSVVYLSYLFHRM------RQL-- 418
Query: 89 VDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
GPFLVI PLSTIP WQ F+ W DL+VI Y
Sbjct: 419 ----------GPFLVIVPLSTIPAWQSTFQNWAPDLDVITYQG 451
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
GPFLVI PLSTIP WQ F+ W DL+VI Y G + S
Sbjct: 419 GPFLVIVPLSTIPAWQSTFQNWAPDLDVITYQGNSRARS 457
>gi|336262225|ref|XP_003345897.1| hypothetical protein SMAC_06298 [Sordaria macrospora k-hell]
gi|380088968|emb|CCC13080.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1126
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 125/187 (66%), Gaps = 3/187 (1%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V IT++E+I+ + LK F W IIDEAHR+KN L + +R+ + +R+L++GTP
Sbjct: 283 FDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRVFNSRNRLLITGTP 342
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKLQLLLKPMMLRRLKEDV 442
LQNN++EL++LLNFL P F ++EAF F GQ + + V +L +L+P +LRR+K DV
Sbjct: 343 LQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDRDQDTVVQQLHRVLRPFLLRRVKSDV 402
Query: 443 EKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSANVPNLMNTMMELRKCCI 501
EKS+ PK+E V + ++ +Q K+Y+ ILE++ ++ G + L+N +M+LRKCC
Sbjct: 403 EKSLLPKKEVNVYIGMSEMQVKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCN 462
Query: 502 HPYLLNG 508
HPYL G
Sbjct: 463 HPYLFEG 469
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 57/102 (55%), Gaps = 19/102 (18%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 183 MRDYQIAGLNWLISLHENGISGILADEMGLGKTLQ----------------TISFLGYLR 226
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
+ T GP LVI P ST+ NW+REF WT ++NV+V
Sbjct: 227 HIMDTT--GPHLVIVPKSTLDNWKREFAKWTPEVNVLVLQGA 266
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GP LVI P ST+ NW+REF WT ++NV+V G +++ + +RL
Sbjct: 233 GPHLVIVPKSTLDNWKREFAKWTPEVNVLVLQGAKEERQQLIADRL 278
>gi|334325220|ref|XP_003340622.1| PREDICTED: hypothetical protein LOC100028596 [Monodelphis domestica]
Length = 2217
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 132/209 (63%), Gaps = 10/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRNM++ +E K KF++L+TT+EI++ D L NW +DEAHR
Sbjct: 981 SRNMIRTHEWMHLQTKR--------LKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHR 1032
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L HR+L++GTPLQN++ EL+SLL+F+ P++FS+ E F E G+
Sbjct: 1033 LKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKG 1092
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E L L+P +LRR+K+DVEKS+ K E ++ +E++ +QK+YY+ IL RN+ L
Sbjct: 1093 R-EYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKAL 1151
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
SKG + + +N MMEL+KCC H YL+
Sbjct: 1152 SKG-SKGSTSGFLNIMMELKKCCNHCYLI 1179
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 67/117 (57%), Gaps = 24/117 (20%)
Query: 17 VKLEKSPVYKNDNT---LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
V L+K P Y LR YQL GLNWL SW G +CILADEMG
Sbjct: 878 VALKKQPSYIGGPEGLELRDYQLNGLNWLAHSWCKGNSCILADEMG-------------- 923
Query: 74 ADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
LGKTIQ+++F++ +F + + GPFL++ PLST+ +WQRE + W +N +VY
Sbjct: 924 -----LGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVY 975
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFL++ PLST+ +WQRE + W +N +VY G
Sbjct: 945 GPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLG 977
>gi|256272897|gb|EEU07865.1| Isw1p [Saccharomyces cerevisiae JAY291]
Length = 1129
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 124/190 (65%), Gaps = 7/190 (3%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V+I ++EIII + LK NW IIDEAHR+KN L + LR +R+L++GTP
Sbjct: 296 FDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTP 355
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLKE 440
LQNN++EL++LLNFL P FS+ + F F TE + V +L +L+P +LRR+K
Sbjct: 356 LQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIVKQLHTVLQPFLLRRIKS 415
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSANVPNLMNTMMELRK 498
DVE S+ PK+E + V ++++QKK+Y+ ILE++ + S G+ + L+N MM+LRK
Sbjct: 416 DVETSLLPKKELNLYVGMSSVQKKWYKKILEKDLDAVNGSNGSKESKT-RLLNIMMQLRK 474
Query: 499 CCIHPYLLNG 508
CC HPYL +G
Sbjct: 475 CCNHPYLFDG 484
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 66/126 (52%), Gaps = 20/126 (15%)
Query: 3 LIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
L+K+ S + +SP Y N LR YQ++G+NWL+ N ILADEMGLGK
Sbjct: 169 LLKEEDSDDDESIEFQFRESPAYVN-GQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGK 227
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT- 121
T+Q TI L ++ + K I GPFLVIAP ST+ NW RE WT
Sbjct: 228 TLQ----------------TISFLGYLRYIEK--IPGPFLVIAPKSTLNNWLREINRWTP 269
Query: 122 DLNVIV 127
D+N +
Sbjct: 270 DVNAFI 275
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
I GPFLVIAP ST+ NW RE WT D+N + G +++
Sbjct: 244 IPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEE 282
>gi|425768760|gb|EKV07276.1| SNF2 family helicase/ATPase, putative [Penicillium digitatum PHI26]
gi|425776120|gb|EKV14354.1| SNF2 family helicase/ATPase, putative [Penicillium digitatum Pd1]
Length = 1096
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 133/203 (65%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ ++ Q I E+ + + F V IT++E+I+ + LK F W +IDEAHR+KN L +
Sbjct: 268 KEERQQLINERLVEEEFDVCITSYEMILREKSHLKKFAWEYIVIDEAHRIKNEESSLSQI 327
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+RL + +R+L++GTPLQNN++EL++LLNFL P F ++EAF F ++ E V +L
Sbjct: 328 IRLFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQDSDQETVVQQL 387
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSAN 485
+L+P +LRR+K DVEKS+ PK+E + V ++ +Q+++Y+ ILE++ ++ +
Sbjct: 388 HRVLRPFLLRRVKSDVEKSLLPKKELNLYVPMSEMQRRWYQKILEKDIDAVNGAAGKRES 447
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 448 KTRLLNIVMQLRKCCNHPYLFEG 470
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 20/111 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + + LR YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 175 ESPAFIH-GELRDYQVAGLNWLVSLHENGISGILADEMGLGKTLQ--------------- 218
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
TI L ++ + I GP LV+ P ST+ NW+REF WT D++V+V
Sbjct: 219 -TISFLGYLRYI--RDINGPHLVVVPKSTLDNWKREFAKWTPDIDVLVLQG 266
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
I GP LV+ P ST+ NW+REF WT D++V+V G +++ + ERL
Sbjct: 232 INGPHLVVVPKSTLDNWKREFAKWTPDIDVLVLQGNKEERQQLINERL 279
>gi|327308272|ref|XP_003238827.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892]
gi|326459083|gb|EGD84536.1| SNF2 family helicase/ATPase [Trichophyton rubrum CBS 118892]
Length = 1113
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 135/204 (66%), Gaps = 6/204 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+++++Q I E+ + KF V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 275 KDERHQLINERLVDEKFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLSQI 334
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ +R+L++GTPLQNN++EL++LLNFL P F ++EAF F + + + V +L
Sbjct: 335 IRVFKSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQEADQDTVVQQL 394
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSA 484
+L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ ILE++ + ++G +
Sbjct: 395 HRVLRPFLLRRVKSDVEKSLLPKKELNLYVGMSEMQVKWYQKILEKDIDAVNGAQGNRES 454
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 455 KT-RLLNIVMQLRKCCNHPYLFEG 477
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 19/114 (16%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
++SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 179 FQQSPSFIQGGEMRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQ------------- 225
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
TI L ++ + GI GP LV P ST+ NW+REF WT D+NV+V
Sbjct: 226 ---TISFLGYLRHI--CGITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGA 274
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP LV P ST+ NW+REF WT D+NV+V G + + + ERL
Sbjct: 238 GITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGAKDERHQLINERL 286
>gi|116201585|ref|XP_001226604.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88177195|gb|EAQ84663.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1125
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 133/203 (65%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDLYK-FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+ ++ Q I E+ + + F V IT++E+I+ + L+ F W IIDEAHR+KN L +
Sbjct: 270 KEERQQLINERLVDENFDVCITSYEMILREKAHLRKFAWEYIIIDEAHRIKNEESSLAQV 329
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKL 426
+R+ + +R+L++GTPLQNN++EL++LLNFL P F + EAF F GQ + + V +L
Sbjct: 330 IRMFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDAEAFDQWFSGQDRDQDTVVQQL 389
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSAN 485
+L+P +LRR+K DVEKS+ PK+E V + ++ +Q K+Y+ ILE++ ++ G +
Sbjct: 390 HRVLRPFLLRRVKSDVEKSLLPKKEVNVYIGMSEMQVKWYQKILEKDIDAVNGAGGKRES 449
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 450 KTRLLNIVMQLRKCCNHPYLFEG 472
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 19/99 (19%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
T+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 185 TMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQ----------------TISFLGYL 228
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
+ G GP LV P ST+ NW+REF WT ++NV+V
Sbjct: 229 RHIM--GTTGPHLVTVPKSTLDNWKREFARWTPEVNVLV 265
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
G GP LV P ST+ NW+REF WT ++NV+V G +++ + ERL
Sbjct: 233 GTTGPHLVTVPKSTLDNWKREFARWTPEVNVLVLQGAKEERQQLINERL 281
>gi|302653548|ref|XP_003018598.1| hypothetical protein TRV_07389 [Trichophyton verrucosum HKI 0517]
gi|291182255|gb|EFE37953.1| hypothetical protein TRV_07389 [Trichophyton verrucosum HKI 0517]
Length = 1104
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 135/204 (66%), Gaps = 6/204 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+++++Q I E+ + KF V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 266 KDERHQLINERLVDEKFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLSQI 325
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ +R+L++GTPLQNN++EL++LLNFL P F ++EAF F + + + V +L
Sbjct: 326 IRVFKSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQEADQDTVVQQL 385
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSA 484
+L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ ILE++ + ++G +
Sbjct: 386 HRVLRPFLLRRVKSDVEKSLLPKKELNLYVGMSEMQVKWYQKILEKDIDAVNGAQGNRES 445
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 446 KT-RLLNVVMQLRKCCNHPYLFEG 468
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 19/114 (16%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
++SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 170 FQQSPSFIQGGEMRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQ------------- 216
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
TI L ++ + GI GP LV P ST+ NW+REF WT D+NV+V
Sbjct: 217 ---TISFLGYLRHI--CGITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGA 265
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP LV P ST+ NW+REF WT D+NV+V G + + + ERL
Sbjct: 229 GITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGAKDERHQLINERL 277
>gi|281344850|gb|EFB20434.1| hypothetical protein PANDA_017908 [Ailuropoda melanoleuca]
Length = 1133
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 131/209 (62%), Gaps = 10/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRN ++EYE K KF+ LITT+EI++ D L NW +DEAHR
Sbjct: 550 SRNTIREYEWIHSQTKR--------LKFNALITTYEILLKDKTVLGSINWAFLGVDEAHR 601
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L HR+L++GTPLQN++ EL+SLL+F+ P++F E F + G+
Sbjct: 602 LKNDDSLLYKTLIDFKSHHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKG 661
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E+ L +L+P +LRR+K+DVEKS+ K E ++ VE++ +QK+YY+ IL RN+ L
Sbjct: 662 R-ENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKAL 720
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+KG T + +N +MEL+KCC H YL+
Sbjct: 721 AKG-TRGSTSGFLNIVMELKKCCNHCYLI 748
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 69/117 (58%), Gaps = 23/117 (19%)
Query: 16 WVKLEKSPVYKNDNTL--RAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+V L+K P Y L R YQLEGLNWL SW + ILADEMG
Sbjct: 447 FVALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMG-------------- 492
Query: 74 ADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
LGKTIQ+++F+ +F + + GPFL++ PLST+ +WQREFE W ++NV+VY
Sbjct: 493 -----LGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVY 544
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFL++ PLST+ +WQREFE W ++NV+VY G
Sbjct: 514 GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIG 546
>gi|452844621|gb|EME46555.1| hypothetical protein DOTSEDRAFT_70536 [Dothistroma septosporum
NZE10]
Length = 1094
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 124/188 (65%), Gaps = 3/188 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V IT++E+I+ + LK F W IIDEAHR+KN L + +R+ + +R+L++GT
Sbjct: 273 KFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQIIRVFNSRNRLLITGT 332
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKLQLLLKPMMLRRLKED 441
PLQNN++EL++LLNFL P F ++EAF F + + V +L +L+P +LRR+K D
Sbjct: 333 PLQNNLHELWALLNFLLPDVFGDSEAFDQWFNNQDADQDAVVQQLHRVLRPFLLRRVKSD 392
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSANVPNLMNTMMELRKCC 500
VEKS+ PK+E + V ++ +Q K+Y+ ILE++ ++ + L+N +M+LRKCC
Sbjct: 393 VEKSLLPKKEINLYVGMSEMQIKWYKNILEKDIDAVNGAAGKKESKTRLLNIVMQLRKCC 452
Query: 501 IHPYLLNG 508
HPYL +G
Sbjct: 453 NHPYLFDG 460
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 20/130 (15%)
Query: 3 LIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
L+++ K++ A + +SP Y +R YQ+ GLNWL+ NG + ILADEMGLGK
Sbjct: 147 LLRQGKQEGKAEHTI-FRESPSYIQGGEMRDYQVAGLNWLISLHENGISGILADEMGLGK 205
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-T 121
T+Q+++ +G + +Q +T GP LV+ P ST+ NW+REF W
Sbjct: 206 TLQTISF-------LGYLRFVQDIT-----------GPHLVVVPKSTLDNWKREFAKWIP 247
Query: 122 DLNVIVYHAT 131
D+NV+V
Sbjct: 248 DINVLVLQGA 257
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRKK 196
F I GP LV+ P ST+ NW+REF W D+NV+V G +++
Sbjct: 218 FVQDITGPHLVVVPKSTLDNWKREFAKWIPDINVLVLQGAKEE 260
>gi|302504248|ref|XP_003014083.1| hypothetical protein ARB_07803 [Arthroderma benhamiae CBS 112371]
gi|291177650|gb|EFE33443.1| hypothetical protein ARB_07803 [Arthroderma benhamiae CBS 112371]
Length = 1128
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 135/204 (66%), Gaps = 6/204 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+++++Q I E+ + KF V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 266 KDERHQLINERLVDEKFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLSQI 325
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ +R+L++GTPLQNN++EL++LLNFL P F ++EAF F + + + V +L
Sbjct: 326 IRVFKSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQEADQDTVVQQL 385
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSA 484
+L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ ILE++ + ++G +
Sbjct: 386 HRVLRPFLLRRVKSDVEKSLLPKKELNLYVGMSEMQVKWYQKILEKDIDAVNGAQGNRES 445
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 446 KT-RLLNIVMQLRKCCNHPYLFEG 468
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 19/114 (16%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
++SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 170 FQQSPSFIQGGEMRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQ------------- 216
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
TI L ++ + GI GP LV P ST+ NW+REF WT D+NV+V
Sbjct: 217 ---TISFLGYLRHI--CGITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGA 265
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP LV P ST+ NW+REF WT D+NV+V G + + + ERL
Sbjct: 229 GITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGAKDERHQLINERL 277
>gi|238878835|gb|EEQ42473.1| chromatin remodelling complex ATPase chain ISW1 [Candida albicans
WO-1]
Length = 1017
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 137/208 (65%), Gaps = 10/208 (4%)
Query: 310 RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++++ + IK K + F V+++++EI+I + LK F+W+ IIDEAHR+KN L +
Sbjct: 216 KDERAELIKNKVMTCDFDVIVSSYEIVIREKATLKKFDWQYIIIDEAHRIKNEESLLSQI 275
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE------ 422
+R+ H +R+L++GTPLQNN+ EL++LLNF+ P F+ NE+F E+ Q + +E
Sbjct: 276 IRMFHSRNRLLITGTPLQNNLRELWALLNFIVPDVFAENESF-DEWFQKDSNNENGGEDQ 334
Query: 423 -VNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT 481
V++L +LKP +LRR+K DVEKS+ PK+E V V+++ +QK Y+ ILE++ ++
Sbjct: 335 VVSQLHKVLKPFLLRRIKADVEKSLLPKKELNVYVKMSPMQKNLYQKILEKDIDAVNGAN 394
Query: 482 -TSANVPNLMNTMMELRKCCIHPYLLNG 508
+ L+N +M+LRKCC HPYL G
Sbjct: 395 GKKESKTRLLNIVMQLRKCCNHPYLFEG 422
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 64/116 (55%), Gaps = 20/116 (17%)
Query: 13 ASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCI 72
S ++ +SP Y + LR YQ++GLNWL+ N + ILADEMGLGKT+Q
Sbjct: 115 TSSILEFTESPGYVH-GQLRPYQIQGLNWLISLHENNLSGILADEMGLGKTLQ------- 166
Query: 73 LADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ F GI GP LVI P ST+ NWQREF W D+ V+V
Sbjct: 167 ---------TISFLGYL--RFIRGINGPHLVITPKSTLDNWQREFNRWIPDIKVLV 211
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 155 FKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F GI GP LVI P ST+ NWQREF W D+ V+V G +
Sbjct: 176 FIRGINGPHLVITPKSTLDNWQREFNRWIPDIKVLVLQGDK 216
>gi|402085293|gb|EJT80191.1| ISWI chromatin-remodeling complex ATPase ISW2 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 1125
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 124/187 (66%), Gaps = 3/187 (1%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V +T++E+I+ + LK F W IIDEAHR+KN L + +RL + +R+L++GTP
Sbjct: 286 FDVCVTSYEMILREKAHLKKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSRNRLLITGTP 345
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKLQLLLKPMMLRRLKEDV 442
LQNN++EL++LLNFL P F ++EAF F +S+ V +L +L+P +LRR+K DV
Sbjct: 346 LQNNIHELWALLNFLLPDVFGDSEAFDQWFSGEGKDSDTVVQQLHRVLRPFLLRRVKSDV 405
Query: 443 EKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTS-ANVPNLMNTMMELRKCCI 501
EKS+ PK+E + +++T +Q+ +Y+ ILE++ ++ + L+N +M+LRKCC
Sbjct: 406 EKSLLPKKEVNLYLKMTEMQRNWYQKILEKDIDAVNGANGKRESKTRLLNIVMQLRKCCN 465
Query: 502 HPYLLNG 508
HPYL G
Sbjct: 466 HPYLFEG 472
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 61/108 (56%), Gaps = 20/108 (18%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + T+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 177 ESPAFIQ-GTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQ--------------- 220
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ + I GP LVI P ST+ NW+RE WT ++NV+V
Sbjct: 221 -TISFLGYLRHIMD--ITGPHLVIVPKSTLDNWKREIARWTPEVNVLV 265
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
I GP LVI P ST+ NW+RE WT ++NV+V G +++ + +RL
Sbjct: 234 ITGPHLVIVPKSTLDNWKREIARWTPEVNVLVLQGAKEERAALINDRL 281
>gi|315054985|ref|XP_003176867.1| ISWI chromatin-remodeling complex ATPase ISW2 [Arthroderma gypseum
CBS 118893]
gi|311338713|gb|EFQ97915.1| ISWI chromatin-remodeling complex ATPase ISW2 [Arthroderma gypseum
CBS 118893]
Length = 1114
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 135/204 (66%), Gaps = 6/204 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+++++Q I E+ + KF V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 275 KDERHQLINERLVDEKFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLSQI 334
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ +R+L++GTPLQNN++EL++LLNFL P F ++EAF F + + + V +L
Sbjct: 335 IRVFKSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQEADQDTVVQQL 394
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSA 484
+L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ ILE++ + ++G +
Sbjct: 395 HRVLRPFLLRRVKSDVEKSLLPKKELNLYVGMSEMQVKWYQKILEKDIDAVNGAQGNRES 454
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 455 KT-RLLNIVMQLRKCCNHPYLFEG 477
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 19/114 (16%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
++SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 179 FQQSPSFIQGGEMRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQ------------- 225
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
TI L ++ + GI GP LV P ST+ NW+REF WT D+NV+V
Sbjct: 226 ---TISFLGYLRHI--CGITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGA 274
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP LV P ST+ NW+REF WT D+NV+V G + + + ERL
Sbjct: 238 GITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGAKDERHQLINERL 286
>gi|171677949|ref|XP_001903925.1| hypothetical protein [Podospora anserina S mat+]
gi|170937043|emb|CAP61702.1| unnamed protein product [Podospora anserina S mat+]
Length = 1057
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 125/187 (66%), Gaps = 3/187 (1%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V IT++E+I+ + L+ F W IIDEAHR+KN L + +R+ + +R+L++GTP
Sbjct: 254 FDVCITSYEMILREKAHLRKFAWEYIIIDEAHRIKNEESSLAQVIRMFNSRNRLLITGTP 313
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKLQLLLKPMMLRRLKEDV 442
LQNN++EL++LLNFL P F ++EAF F GQ + + V +L +L+P +LRR+K DV
Sbjct: 314 LQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDRDQDTVVQQLHKVLRPFLLRRVKSDV 373
Query: 443 EKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSANVPNLMNTMMELRKCCI 501
EKS+ PK+E V + ++ +Q K+Y+ ILE++ ++ G + L+N +M+LRKCC
Sbjct: 374 EKSLLPKKEVNVYIGMSEMQVKWYKRILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCCN 433
Query: 502 HPYLLNG 508
HPYL G
Sbjct: 434 HPYLFEG 440
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 20/112 (17%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + N T+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 145 ESPAFIN-GTMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQ--------------- 188
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
TI L ++ + GI GP L+ P ST+ NW+REF WT ++NV++
Sbjct: 189 -TISFLGYLRHIM--GITGPHLITVPKSTLDNWKREFAKWTPEVNVLILQGA 237
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP L+ P ST+ NW+REF WT ++NV++ G +++ + +RL
Sbjct: 201 GITGPHLITVPKSTLDNWKREFAKWTPEVNVLILQGAKEERHQLINDRL 249
>gi|326478017|gb|EGE02027.1| SNF2 family helicase/ATPase [Trichophyton equinum CBS 127.97]
Length = 1113
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 135/204 (66%), Gaps = 6/204 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+++++Q I E+ + KF V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 275 KDERHQLINERLVDEKFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLSQI 334
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ +R+L++GTPLQNN++EL++LLNFL P F ++EAF F + + + V +L
Sbjct: 335 IRVFKSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQEADQDTVVQQL 394
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSA 484
+L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ ILE++ + ++G +
Sbjct: 395 HRVLRPFLLRRVKSDVEKSLLPKKELNLYVGMSEMQVKWYQKILEKDIDAVNGAQGNRES 454
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 455 KT-RLLNIVMQLRKCCNHPYLFEG 477
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 19/114 (16%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
++SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 179 FQQSPSFIQGGEMRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQ------------- 225
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
TI L ++ + GI GP LV P ST+ NW+REF WT D+NV+V
Sbjct: 226 ---TISFLGYLRHI--CGITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGA 274
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP LV P ST+ NW+REF WT D+NV+V G + + + ERL
Sbjct: 238 GITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGAKDERHQLINERL 286
>gi|340520624|gb|EGR50860.1| predicted protein [Trichoderma reesei QM6a]
Length = 1109
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 136/203 (66%), Gaps = 4/203 (1%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++++++ I E+ + KF V IT++E+++ + LK F W IIDEAHR+KN L +
Sbjct: 248 KDERHELINERLVDEKFDVCITSYEMVLREKAHLKKFAWEYIIIDEAHRIKNEESSLSQV 307
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKL 426
+RL + +R+L++GTPLQNN++EL++LLNFL P F + +AF F GQ + + + V +L
Sbjct: 308 IRLFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDADAFDQWFSGQDQDQDKVVQQL 367
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSAN 485
+L+P +LRR+K DVEKS+ PK+E V + ++ +Q K+Y+ ILE++ ++ G +
Sbjct: 368 HRVLRPFLLRRVKSDVEKSLLPKKEINVYLGMSEMQVKWYQKILEKDIDAVNGAGGKRES 427
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 428 KTRLLNIVMQLRKCCNHPYLFEG 450
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 58/103 (56%), Gaps = 19/103 (18%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
T+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 163 TMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQ----------------TISFLGYL 206
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
+ GI GP LV P ST+ NW+REF WT ++NV+V
Sbjct: 207 RHIM--GITGPHLVTVPKSTLDNWKREFAKWTPEVNVLVLQGA 247
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP LV P ST+ NW+REF WT ++NV+V G + + ERL
Sbjct: 211 GITGPHLVTVPKSTLDNWKREFAKWTPEVNVLVLQGAKDERHELINERL 259
>gi|444730344|gb|ELW70731.1| Chromodomain-helicase-DNA-binding protein 2 [Tupaia chinensis]
Length = 1104
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 131/209 (62%), Gaps = 10/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRN ++EYE K KF+ LITT+EI++ D L NW +DEAHR
Sbjct: 560 SRNTIREYEWIHSQTKR--------LKFNALITTYEILLKDKTVLGSINWAFLGVDEAHR 611
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L HR+L++GTPLQN++ EL+SLL+F+ P++F E F + G+
Sbjct: 612 LKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKG 671
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E+ L +L+P +LRR+K+DVEKS+ K E ++ VE++ +QK+YY+ IL RN+ L
Sbjct: 672 R-ENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKAL 730
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+KG T + +N +MEL+KCC H YL+
Sbjct: 731 AKG-TRGSTSGFLNIVMELKKCCNHCYLI 758
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 69/117 (58%), Gaps = 23/117 (19%)
Query: 16 WVKLEKSPVYKNDNTL--RAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+V L+K P Y L R YQLEGLNWL SW + ILADEMG
Sbjct: 457 FVALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMG-------------- 502
Query: 74 ADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
LGKTIQ+++F+ +F + + GPFL++ PLST+ +WQREFE W ++NV+VY
Sbjct: 503 -----LGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVY 554
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFL++ PLST+ +WQREFE W ++NV+VY G
Sbjct: 524 GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIG 556
>gi|323310031|gb|EGA63226.1| Isw1p [Saccharomyces cerevisiae FostersO]
Length = 1069
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 124/190 (65%), Gaps = 7/190 (3%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V+I ++EIII + LK NW IIDEAHR+KN L + LR +R+L++GTP
Sbjct: 236 FDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTP 295
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLKE 440
LQNN++EL++LLNFL P FS+ + F F TE + V +L +L+P +LRR+K
Sbjct: 296 LQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIVKQLHTVLQPFLLRRIKS 355
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSANVPNLMNTMMELRK 498
DVE S+ PK+E + V ++++QKK+Y+ ILE++ + S G+ + L+N MM+LRK
Sbjct: 356 DVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKT-RLLNIMMQLRK 414
Query: 499 CCIHPYLLNG 508
CC HPYL +G
Sbjct: 415 CCNHPYLFDG 424
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 61/111 (54%), Gaps = 20/111 (18%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+ +SP Y N LR YQ++G+NWL+ N ILADEMGLGKT+Q
Sbjct: 124 QFRESPAYVN-GQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQ------------ 170
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ + K I GPFLVIAP ST+ NW RE WT D+N +
Sbjct: 171 ----TISFLGYLRYIEK--IPGPFLVIAPKSTLNNWLREINRWTPDVNAFI 215
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
I GPFLVIAP ST+ NW RE WT D+N + G +++
Sbjct: 184 IPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEE 222
>gi|326473172|gb|EGD97181.1| SNF2 family helicase/ATPase [Trichophyton tonsurans CBS 112818]
Length = 1113
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 135/204 (66%), Gaps = 6/204 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+++++Q I E+ + KF V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 275 KDERHQLINERLVDEKFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLSQI 334
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ +R+L++GTPLQNN++EL++LLNFL P F ++EAF F + + + V +L
Sbjct: 335 IRVFKSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQEADQDTVVQQL 394
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSA 484
+L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ ILE++ + ++G +
Sbjct: 395 HRVLRPFLLRRVKSDVEKSLLPKKELNLYVGMSEMQVKWYQKILEKDIDAVNGAQGNRES 454
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 455 KT-RLLNIVMQLRKCCNHPYLFEG 477
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 19/114 (16%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
++SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 179 FQQSPSFIQGGEMRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQ------------- 225
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
TI L ++ + GI GP LV P ST+ NW+REF WT D+NV+V
Sbjct: 226 ---TISFLGYLRHI--CGITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGA 274
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP LV P ST+ NW+REF WT D+NV+V G + + + ERL
Sbjct: 238 GITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGAKDERHQLINERL 286
>gi|334314376|ref|XP_001365054.2| PREDICTED: chromodomain-helicase-DNA-binding protein 2 [Monodelphis
domestica]
Length = 1975
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/209 (42%), Positives = 131/209 (62%), Gaps = 10/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRN ++EYE K KF+ LITT+EI++ D L NW +DEAHR
Sbjct: 716 SRNTIREYEWIHSQTKR--------LKFNALITTYEILLKDKTVLGSINWAFLGVDEAHR 767
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L HR+L++GTPLQN++ EL+SLL+F+ P++F E F + G+
Sbjct: 768 LKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEDDHGKG 827
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E+ L +L+P +LRR+K+DVEKS+ K E ++ VE++ +QK+YY+ IL RN+ L
Sbjct: 828 R-ENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSVLQKQYYKWILTRNYKAL 886
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
SKGT + +N +MEL+KCC H YL+
Sbjct: 887 SKGTR-GSTSGFLNIVMELKKCCNHCYLI 914
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 16 WVKLEKSPVYKNDNTL--RAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+V L+K P Y L R YQLEGLNWL SW + ILADEMGLGKTIQ
Sbjct: 613 FVALKKQPAYIGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQ-------- 664
Query: 74 ADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
TI L+++ + + GPFLV+ PLST+ +WQREFE W ++NV+VY
Sbjct: 665 --------TISFLSYL--FHQHQLFGPFLVVVPLSTLTSWQREFEIWAPEINVVVY 710
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFLV+ PLST+ +WQREFE W ++NV+VY G
Sbjct: 680 GPFLVVVPLSTLTSWQREFEIWAPEINVVVYIG 712
>gi|342887596|gb|EGU87078.1| hypothetical protein FOXB_02472 [Fusarium oxysporum Fo5176]
Length = 1116
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 124/188 (65%), Gaps = 3/188 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V IT++E+++ + LK F W IIDEAHR+KN L + +RL +R+L++GT
Sbjct: 280 KFDVCITSYEMVLREKAHLKKFAWEYIIIDEAHRIKNEESSLSQVIRLFSSRNRLLITGT 339
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEF-GQLKTESE-VNKLQLLLKPMMLRRLKED 441
PLQNN++EL++LLNFL P F + EAF F GQ + + V +L +L+P +LRR+K D
Sbjct: 340 PLQNNLHELWALLNFLLPDVFGDAEAFDQWFSGQDRDQDTVVQQLHKVLRPFLLRRVKSD 399
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLS-KGTTSANVPNLMNTMMELRKCC 500
VEKS+ PK+E V + ++ +Q K+Y+ ILE++ ++ G + L+N +M+LRKCC
Sbjct: 400 VEKSLLPKKEVNVYLGMSEMQIKWYQKILEKDIDAVNGAGGKRESKTRLLNIVMQLRKCC 459
Query: 501 IHPYLLNG 508
HPYL G
Sbjct: 460 NHPYLFEG 467
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 58/99 (58%), Gaps = 19/99 (19%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
T+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q TI L ++
Sbjct: 180 TMRDYQVAGLNWLISLHENGISGILADEMGLGKTLQ----------------TISFLGYL 223
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
+ I GP LVI P ST+ NW+REF WT +++V+V
Sbjct: 224 RHILD--ITGPHLVIVPKSTLDNWKREFAKWTPEVDVLV 260
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
I GP LVI P ST+ NW+REF WT +++V+V G
Sbjct: 229 ITGPHLVIVPKSTLDNWKREFAKWTPEVDVLVLQG 263
>gi|290878263|emb|CBK39322.1| Isw1p [Saccharomyces cerevisiae EC1118]
Length = 1069
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 124/190 (65%), Gaps = 7/190 (3%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V+I ++EIII + LK NW IIDEAHR+KN L + LR +R+L++GTP
Sbjct: 236 FDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTP 295
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLKE 440
LQNN++EL++LLNFL P FS+ + F F TE + V +L +L+P +LRR+K
Sbjct: 296 LQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIVKQLHTVLQPFLLRRIKS 355
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSANVPNLMNTMMELRK 498
DVE S+ PK+E + V ++++QKK+Y+ ILE++ + S G+ + L+N MM+LRK
Sbjct: 356 DVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKT-RLLNIMMQLRK 414
Query: 499 CCIHPYLLNG 508
CC HPYL +G
Sbjct: 415 CCNHPYLFDG 424
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 61/111 (54%), Gaps = 20/111 (18%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+ +SP Y N LR YQ++G+NWL+ N ILADEMGLGKT+Q
Sbjct: 124 QFRESPAYVN-GQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQ------------ 170
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ + K I GPFLVIAP ST+ NW RE WT D+N +
Sbjct: 171 ----TISFLGYLRYIEK--IPGPFLVIAPKSTLNNWLREINRWTPDVNAFI 215
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
I GPFLVIAP ST+ NW RE WT D+N + G +++
Sbjct: 184 IPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEE 222
>gi|323349632|gb|EGA83848.1| Isw1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 1101
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 124/190 (65%), Gaps = 7/190 (3%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V+I ++EIII + LK NW IIDEAHR+KN L + LR +R+L++GTP
Sbjct: 268 FDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTP 327
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLKE 440
LQNN++EL++LLNFL P FS+ + F F TE + V +L +L+P +LRR+K
Sbjct: 328 LQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIVKQLHTVLQPFLLRRIKS 387
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSANVPNLMNTMMELRK 498
DVE S+ PK+E + V ++++QKK+Y+ ILE++ + S G+ + L+N MM+LRK
Sbjct: 388 DVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKT-RLLNIMMQLRK 446
Query: 499 CCIHPYLLNG 508
CC HPYL +G
Sbjct: 447 CCNHPYLFDG 456
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 61/111 (54%), Gaps = 20/111 (18%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+ +SP Y N LR YQ++G+NWL+ N ILADEMGLGKT+Q
Sbjct: 156 QFRESPAYVN-GQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQ------------ 202
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIV 127
TI L ++ + K I GPFLVIAP ST+ NW RE WT D+N +
Sbjct: 203 ----TISFLGYLRYIEK--IPGPFLVIAPKSTLNNWLREINRWTPDVNAFI 247
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
I GPFLVIAP ST+ NW RE WT D+N + G +++
Sbjct: 216 IPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEE 254
>gi|158259161|dbj|BAF85539.1| unnamed protein product [Homo sapiens]
Length = 1049
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 131/209 (62%), Gaps = 10/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRN ++EYE K KF+ LITT+EI++ D L NW +DEAHR
Sbjct: 570 SRNTIREYEWIHSQTKR--------LKFNALITTYEILLKDKTVLGSINWAFLGVDEAHR 621
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L HR+L++GTPLQN++ EL+SLL+F+ P++F E F + G+
Sbjct: 622 LKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKG 681
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E+ L +L+P +LRR+K+DVEKS+ K E ++ VE++ +QK+YY+ IL RN+ L
Sbjct: 682 R-ENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKAL 740
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+KG T + +N +MEL+KCC H YL+
Sbjct: 741 AKG-TRGSTSGFLNIVMELKKCCNHCYLI 768
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 69/117 (58%), Gaps = 23/117 (19%)
Query: 16 WVKLEKSPVYKNDNTL--RAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+V L+K P Y L R YQLEGLNWL SW + ILADEMG
Sbjct: 467 FVALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMG-------------- 512
Query: 74 ADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
LGKTIQ+++F+ +F + + GPFL++ PLST+ +WQREFE W ++NV+VY
Sbjct: 513 -----LGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVY 564
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFL++ PLST+ +WQREFE W ++NV+VY G
Sbjct: 534 GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIG 566
>gi|389640599|ref|XP_003717932.1| ISWI chromatin-remodeling complex ATPase ISW2 [Magnaporthe oryzae
70-15]
gi|351640485|gb|EHA48348.1| ISWI chromatin-remodeling complex ATPase ISW2 [Magnaporthe oryzae
70-15]
gi|440471071|gb|ELQ40108.1| ISWI chromatin-remodeling complex ATPase ISW2 [Magnaporthe oryzae
Y34]
gi|440481393|gb|ELQ61986.1| ISWI chromatin-remodeling complex ATPase ISW2 [Magnaporthe oryzae
P131]
Length = 1128
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 124/187 (66%), Gaps = 3/187 (1%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V IT++E+I+ + LK F W IIDEAHR+KN L + +RL + +R+L++GTP
Sbjct: 286 FDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSRNRLLITGTP 345
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKLQLLLKPMMLRRLKEDV 442
LQNN++EL++LLNFL P F ++EAF F +S+ V +L +L+P +LRR+K DV
Sbjct: 346 LQNNIHELWALLNFLLPDVFGDSEAFDQWFSGEGQDSDTVVQQLHRVLRPFLLRRVKADV 405
Query: 443 EKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTS-ANVPNLMNTMMELRKCCI 501
EKS+ PK+E + +++T +Q+ +Y+ ILE++ ++ + L+N +M+LRKCC
Sbjct: 406 EKSLLPKKEVNLYLKMTEMQRTWYQKILEKDIDAVNGANGKRESKTRLLNIVMQLRKCCN 465
Query: 502 HPYLLNG 508
HPYL G
Sbjct: 466 HPYLFEG 472
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 73/142 (51%), Gaps = 31/142 (21%)
Query: 21 KSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLG 80
+SP + T+R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 177 ESPAFIQ-GTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQ--------------- 220
Query: 81 KTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHATFVVLLQTG 139
TI L ++ + GI GP LVI P ST+ NW+REF WT ++NV+V G
Sbjct: 221 -TISFLGYLRHIM--GITGPHLVIVPKSTLDNWKREFGKWTPEVNVLVLQ---------G 268
Query: 140 SKFFRICL--EFFVDAVFKTGI 159
+K R L E VD F I
Sbjct: 269 AKEERAALIAERLVDESFDVCI 290
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP LVI P ST+ NW+REF WT ++NV+V G +++ + ERL
Sbjct: 233 GITGPHLVIVPKSTLDNWKREFGKWTPEVNVLVLQGAKEERAALIAERL 281
>gi|366989549|ref|XP_003674542.1| hypothetical protein NCAS_0B00810 [Naumovozyma castellii CBS 4309]
gi|342300406|emb|CCC68165.1| hypothetical protein NCAS_0B00810 [Naumovozyma castellii CBS 4309]
Length = 1060
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 125/190 (65%), Gaps = 5/190 (2%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF VLIT++E++I + LK F W+ +IDEAHR+KN +L + +RL + ++R+L++GT
Sbjct: 236 KFDVLITSYEMVIKEKNVLKKFAWQYIVIDEAHRIKNEQSQLSQIIRLFYSKNRLLITGT 295
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P F ++ F F Q +E + V +L +L P +LRR+K
Sbjct: 296 PLQNNLHELWALLNFLLPDVFGDSGIFDEWFEQNNSEQDQEIVVQQLHTVLNPFLLRRIK 355
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSANVPNLMNTMMELRK 498
DVEKS+ PK ET V V +T +Q K+Y+ +LE++ ++ L+N +M+LRK
Sbjct: 356 ADVEKSLLPKIETNVYVGMTEMQVKWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRK 415
Query: 499 CCIHPYLLNG 508
CC HPYL G
Sbjct: 416 CCNHPYLFEG 425
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 19/113 (16%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
+ +SP + LR YQ++GLNWL+ N + ILADEMGLGKT+Q
Sbjct: 125 VSESPAFIKGGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQ------------- 171
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
TI L ++ V K I GPFL++ P ST+ NW+REF WT ++N IV H
Sbjct: 172 ---TISFLGYLRYVKK--IDGPFLIVVPKSTLDNWRREFNKWTPEVNAIVLHG 219
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
I GPFL++ P ST+ NW+REF WT ++N IV HG +++
Sbjct: 185 IDGPFLIVVPKSTLDNWRREFNKWTPEVNAIVLHGDKEE 223
>gi|338717329|ref|XP_001488063.2| PREDICTED: chromodomain-helicase-DNA-binding protein 2 isoform 1
[Equus caballus]
Length = 794
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 131/209 (62%), Gaps = 10/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRN ++EYE K KF+ LITT+EI++ D L NW +DEAHR
Sbjct: 88 SRNTIREYEWIHSQTKR--------LKFNALITTYEILLKDKTVLGSINWAFLGVDEAHR 139
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L HR+L++GTPLQN++ EL+SLL+F+ P++F E F + G+
Sbjct: 140 LKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKG 199
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E+ L +L+P +LRR+K+DVEKS+ K E ++ VE++ +QK+YY+ IL RN+ L
Sbjct: 200 R-ENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKAL 258
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+KG T + +N +MEL+KCC H YL+
Sbjct: 259 AKG-TRGSTSGFLNIVMELKKCCNHCYLI 286
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
Query: 68 TRNCILADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNV 125
+ + ILADEMGLGKTIQ+++F+ +F + + GPFL++ PLST+ +WQREFE W ++NV
Sbjct: 20 SNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINV 79
Query: 126 IVY 128
+VY
Sbjct: 80 VVY 82
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFL++ PLST+ +WQREFE W ++NV+VY G
Sbjct: 52 GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIG 84
>gi|296826190|ref|XP_002850934.1| chromatin remodelling complex ATPase chain ISW1 [Arthroderma otae
CBS 113480]
gi|238838488|gb|EEQ28150.1| chromatin remodelling complex ATPase chain ISW1 [Arthroderma otae
CBS 113480]
Length = 1113
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 135/204 (66%), Gaps = 6/204 (2%)
Query: 310 RNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
+++++Q I E+ + KF V IT++E+I+ + LK F W IIDEAHR+KN L +
Sbjct: 275 KDERHQLINERLVDEKFDVCITSYEMILREKSHLKKFAWEYIIIDEAHRIKNEESSLSQI 334
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE--VNKL 426
+R+ +R+L++GTPLQNN++EL++LLNFL P F ++EAF F + + + V +L
Sbjct: 335 IRVFKSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSNQEADQDTVVQQL 394
Query: 427 QLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSA 484
+L+P +LRR+K DVEKS+ PK+E + V ++ +Q K+Y+ ILE++ + ++G +
Sbjct: 395 HRVLRPFLLRRVKSDVEKSLLPKKELNLYVGMSEMQVKWYQKILEKDIDAVNGAQGNRES 454
Query: 485 NVPNLMNTMMELRKCCIHPYLLNG 508
L+N +M+LRKCC HPYL G
Sbjct: 455 KT-RLVNIVMQLRKCCNHPYLFEG 477
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 19/114 (16%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
++SP + +R YQ+ GLNWL+ NG + ILADEMGLGKT+Q
Sbjct: 179 FQQSPSFIQGGEMRDYQIAGLNWLVSLHENGISGILADEMGLGKTLQ------------- 225
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
TI L ++ + GI GP LV P ST+ NW+REF WT D+NV+V
Sbjct: 226 ---TISFLGYLRHI--CGITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGA 274
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 158 GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERL 205
GI GP LV P ST+ NW+REF WT D+NV+V G + + + ERL
Sbjct: 238 GITGPHLVAVPKSTLDNWKREFGKWTPDVNVLVLQGAKDERHQLINERL 286
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,124,637,521
Number of Sequences: 23463169
Number of extensions: 347930756
Number of successful extensions: 913974
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11533
Number of HSP's successfully gapped in prelim test: 2106
Number of HSP's that attempted gapping in prelim test: 839843
Number of HSP's gapped (non-prelim): 45327
length of query: 513
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 366
effective length of database: 8,910,109,524
effective search space: 3261100085784
effective search space used: 3261100085784
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 79 (35.0 bits)