BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14708
(513 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
PE=1 SV=1
Length = 2986
Score = 318 bits (814), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1039 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1096
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1097 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1156
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1157 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1216
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1217 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1250
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 936 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 976
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 977 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1036
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1037 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1073
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 996 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1044
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1591 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRAI 1636
>sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7
PE=1 SV=3
Length = 2997
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1049 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1106
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1107 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEF 1166
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1167 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1226
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1227 TFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1260
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 103/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N
Sbjct: 946 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------M 986
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 987 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1046
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1047 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1083
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1006 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1054
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1601 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1646
>sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus GN=CHD7
PE=2 SV=1
Length = 3011
Score = 316 bits (809), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 146/214 (68%), Positives = 179/214 (83%), Gaps = 2/214 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDE 354
+ ASR +Q YE++F++ + + IK YKFH +ITTFE+I++DC EL++ WR +IDE
Sbjct: 1050 SQASRRTIQLYEMYFKDPQGRVIKGS--YKFHAIITTFEMILTDCPELRNIPWRCVVIDE 1107
Query: 355 AHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEF 414
AHRLKNRNCKLLEGL+++ LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EF
Sbjct: 1108 AHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELFSLLHFLEPGRFPSETTFMQEF 1167
Query: 415 GQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNF 474
G LKTE +V KLQ +LKPMMLRRLKEDVEK++APKEET++EVELTNIQKKYYR ILE+NF
Sbjct: 1168 GDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF 1227
Query: 475 SFLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+FLSKG ANVPNL+NTMMELRKCC HPYL+NG
Sbjct: 1228 AFLSKGGGQANVPNLLNTMMELRKCCNHPYLING 1261
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 104/163 (63%), Gaps = 25/163 (15%)
Query: 9 KKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLT 68
++PPA DW K E S YKN+N LR YQLEG+NWL+F+W+N T
Sbjct: 947 ERPPADDWKKSESSREYKNNNKLREYQLEGVNWLLFNWYN-------------------T 987
Query: 69 RNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVY 128
RNCILADEMGLGKTIQS+TF+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VY
Sbjct: 988 RNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVY 1047
Query: 129 HATFVVLLQTGSKFFRICLEFFVDAVFKTGIRGPFLVIAPLST 171
H + Q + ++ +F D + I+G + A ++T
Sbjct: 1048 HGS-----QASRRTIQLYEMYFKDPQGRV-IKGSYKFHAIITT 1084
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 40/51 (78%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRR 200
F+ ++ GI GPFLVIAPLSTIPNW+REF WT+LNV+VYHG + SRR
Sbjct: 1007 FLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--SQASRR 1055
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 33/46 (71%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
++RSECF+VE+ LL +GWGRW + L++ ++ TE+ VE + R +
Sbjct: 1602 YARSECFRVEKNLLVYGWGRWTDILSHGRYKRQLTEQDVETICRTI 1647
>sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6
PE=1 SV=4
Length = 2715
Score = 311 bits (798), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 178/211 (84%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE+ +R+ + + ++KFHV+ITTFE+I++DC ELK +W IIDEAHR
Sbjct: 545 SRQMIQQYEMVYRDAQGNPLS--GVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR 602
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKNRNCKLLEGL+L+ LEH+VLL+GTPLQN+V ELFSLLNFLEP QF + AF+ EFG L
Sbjct: 603 LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL 662
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLK+DVEK++APK+ET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 663 KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL 722
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
+KG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 723 TKGANQHNMPNLINTMMELRKCCNHPYLING 753
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/148 (51%), Positives = 94/148 (63%), Gaps = 22/148 (14%)
Query: 12 PASD-WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRN 70
PASD W KLEKS YKN N LR YQLEG+NWL+F+W+N +N
Sbjct: 441 PASDSWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYN-------------------RKN 481
Query: 71 CILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA 130
CILADEMGLGKTIQS+TF+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYH
Sbjct: 482 CILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG 541
Query: 131 TFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +R + VFK
Sbjct: 542 SQISRQMIQQYEMVYRDAQGNPLSGVFK 569
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHGRRKKLSRRDKERLRLKY 209
F+ +F GI GPFL+IAPLSTI NW+REF WT++N IVYHG ++SR+ ++ + Y
Sbjct: 499 FLSEIFLRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG--SQISRQMIQQYEMVY 556
Query: 210 VAADYVPKDG 219
A P G
Sbjct: 557 RDAQGNPLSG 566
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 228 RSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
R+ECF+VE+ LL FGWGRWK+ L + F+ E+ +E + R L
Sbjct: 1094 RAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRAL 1137
>sp|Q9JIX5|CHD8_RAT Chromodomain-helicase-DNA-binding protein 8 OS=Rattus norvegicus
GN=Chd8 PE=1 SV=2
Length = 2581
Score = 308 bits (789), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P A+ W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQANAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1438 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>sp|Q09XV5|CHD8_MOUSE Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8
PE=1 SV=1
Length = 2582
Score = 308 bits (789), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 896 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 953
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 954 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1013
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1014 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1073
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1074 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1105
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P A+ W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 792 RPQANAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 832
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 833 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 892
Query: 130 ATFV 133
+
Sbjct: 893 GSLA 896
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 851 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 893
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 223 YGNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ + R++CF+VE+ LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1440 HHTYGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1488
>sp|Q8BYH8|CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9 OS=Mus musculus GN=Chd9
PE=1 SV=2
Length = 2885
Score = 308 bits (789), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 173/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL +WR IIDEAHR
Sbjct: 943 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIDWRCVIIDEAHR 1000
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1001 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1060
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1061 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1120
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1121 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1151
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 97/149 (65%), Gaps = 21/149 (14%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+E+S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 838 RPPSNIWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 878
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 879 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 938
Query: 130 ATFVV--LLQTGSKFFRICLEFFVDAVFK 156
+ + ++Q +FR + ++
Sbjct: 939 GSLISRQMIQQYEMYFRDSQGRIIRGAYR 967
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 897 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 939
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G + R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1487 GGYGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEVICRAL 1534
>sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8
PE=1 SV=5
Length = 2581
Score = 308 bits (788), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 142/212 (66%), Positives = 174/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ + + I YKF LITTFE+I+SDC EL++ WR IIDEAH
Sbjct: 894 ASRQMIQQYEMYCKDSRGRLIP--GAYKFDALITTFEMILSDCPELREIEWRCVIIDEAH 951
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ +FG
Sbjct: 952 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGD 1011
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 1012 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1071
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
LSKG N+PNL+NTMMELRKCC HPYL+NG
Sbjct: 1072 LSKGAGHTNMPNLLNTMMELRKCCNHPYLING 1103
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KLE S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 790 RPQASAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYN-------------------RQ 830
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYH
Sbjct: 831 NCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYH 890
Query: 130 ATFV 133
+
Sbjct: 891 GSLA 894
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 34/43 (79%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GI GPFLVIAPLSTI NW+REF WT++N IVYHG
Sbjct: 849 FLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHG 891
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 177 REFEAWTDLNVIVYHGRRKKLSRRDKERLRLKYVAADYVPKDGEVLYGNWSRSECFKVER 236
R F D +++ + L D ER R + D YG R++CF+VE+
Sbjct: 1406 RHFSTLKDDDLVEF----SDLESEDDERPRSRR-------HDRHHAYG---RTDCFRVEK 1451
Query: 237 GLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
LL +GWGRW++ L++ F+ TE VE + R +
Sbjct: 1452 HLLVYGWGRWRDILSHGRFKRRMTERDVETICRAI 1486
>sp|B5DE69|CHD8_XENTR Chromodomain-helicase-DNA-binding protein 8 OS=Xenopus tropicalis
GN=chd8 PE=2 SV=2
Length = 2184
Score = 307 bits (786), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 175/212 (82%), Gaps = 2/212 (0%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++ K + I YKF LITTFE+++SDC EL++ WR IIDEAH
Sbjct: 838 ASRQMIQQYEMYCKDSKGRLIP--GAYKFDALITTFEMVLSDCPELREIEWRCVIIDEAH 895
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L+ + LEH+VLL+GTPLQN V ELFSLL+FLEP QFS+ F+ +FG
Sbjct: 896 RLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPTQFSSEAEFLKDFGD 955
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELTNIQKKYYR ILE+NFSF
Sbjct: 956 LKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF 1015
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L+KG + +N PNL+NTMMELRKCC HPYL+ G
Sbjct: 1016 LTKGASQSNTPNLLNTMMELRKCCNHPYLITG 1047
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 84/124 (67%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P A+ W KLE S Y+N N LR YQLEG+NWL+F+W+N +
Sbjct: 734 RPAATSWKKLELSREYQNGNQLREYQLEGVNWLLFNWYN-------------------RQ 774
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ V+ GIRGPFLVIAPLSTI NW+REF +WT +N IVYH
Sbjct: 775 NCILADEMGLGKTIQSITFLQEVYNVGIRGPFLVIAPLSTITNWEREFGSWTQMNTIVYH 834
Query: 130 ATFV 133
+
Sbjct: 835 GSLA 838
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ V+ GIRGPFLVIAPLSTI NW+REF +WT +N IVYHG
Sbjct: 793 FLQEVYNVGIRGPFLVIAPLSTITNWEREFGSWTQMNTIVYHG 835
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 225 NWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R++CF+VE+ LL +GWGRW++ L + F+ G E VE++ R +
Sbjct: 1384 GYGRTDCFRVEKHLLVYGWGRWRDILTHGRFKRGMNERDVEKICRAI 1430
>sp|B0R0I6|CHD8_DANRE Chromodomain-helicase-DNA-binding protein 8 OS=Danio rerio GN=chd8
PE=3 SV=2
Length = 2511
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 177/213 (83%), Gaps = 3/213 (1%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
ASR M+Q+YE++ ++DK I YKF LITTFE+I+SDC EL++ +WR +IDEAH
Sbjct: 930 ASRQMIQQYEMYCKDDKGHLIP--GAYKFDALITTFEMILSDCPELREISWRCVVIDEAH 987
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKNRNCKLL+ L++L +EH+VLL+GTPLQN V ELFSLL+FLEP QF + F+ EFG
Sbjct: 988 RLKNRNCKLLDSLKMLEIEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLREFGD 1047
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
LKTE +V KLQ +LKPMMLRRLKEDVEK++APK+ET++EVELT++QKKYYR ILERNFSF
Sbjct: 1048 LKTEEQVQKLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFSF 1107
Query: 477 LSKGTT-SANVPNLMNTMMELRKCCIHPYLLNG 508
LS G T ++NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1108 LSMGATQNSNVPNLLNTMMELRKCCNHPYLITG 1140
Score = 143 bits (360), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 82/124 (66%), Gaps = 19/124 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+P AS W KL++S YKN N LR YQLEG+NWL+F+W+N +
Sbjct: 826 RPAASAWKKLDESTEYKNGNQLREYQLEGVNWLLFNWYN-------------------RQ 866
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+ + +F G++ PF++IAPLSTI NW+REF WTD+N IVYH
Sbjct: 867 NCILADEMGLGKTIQSIALLSEMFSAGVQSPFMIIAPLSTITNWEREFSNWTDMNAIVYH 926
Query: 130 ATFV 133
+
Sbjct: 927 GSLA 930
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
+F G++ PF++IAPLSTI NW+REF WTD+N IVYHG
Sbjct: 889 MFSAGVQSPFMIIAPLSTITNWEREFSNWTDMNAIVYHG 927
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 224 GNWSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
G + R++CF+VE+ LL +GWGRW++ L++ + +E VE + R++
Sbjct: 1482 GGYGRTDCFRVEKHLLVYGWGRWRDILSHARCKRRLSERDVETICRVI 1529
>sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 OS=Homo sapiens GN=CHD9
PE=1 SV=2
Length = 2897
Score = 306 bits (785), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 172/211 (81%), Gaps = 2/211 (0%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR M+Q+YE++FR+ + + I+ Y+F +ITTFE+I+ C EL WR IIDEAHR
Sbjct: 944 SRQMIQQYEMYFRDSQGRIIR--GAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHR 1001
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN+NCKLLEGL+L++LEH+VLL+GTPLQN V ELFSLL+FLEP +F + FM EFG L
Sbjct: 1002 LKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDL 1061
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
KTE +V KLQ +LKPMMLRRLKEDVEK +APKEET++EVELTNIQKKYYR ILE+NFSFL
Sbjct: 1062 KTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFL 1121
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
SKG NVPNL+NTMMELRKCC HPYL+ G
Sbjct: 1122 SKGAGQTNVPNLVNTMMELRKCCNHPYLIKG 1152
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP++ W K+++S YKN N LR YQLEGLNWL+F+W+N R
Sbjct: 839 RPPSNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYN-------------------RR 879
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYH 129
NCILADEMGLGKTIQS+TF+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYH
Sbjct: 880 NCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYH 939
Query: 130 ATFVV--LLQTGSKFFR 144
+ + ++Q +FR
Sbjct: 940 GSLISRQMIQQYEMYFR 956
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHG 192
F+ + TGIRGPFL+IAPLSTI NW+REF WTD+NV+VYHG
Sbjct: 898 FLYEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHG 940
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 226 WSRSECFKVERGLLTFGWGRWKEFLANNEFRNGWTEEYVEELARLL 271
+ R+ECF+VE+ LL +GWGRW+E L++ F+ E VE + R L
Sbjct: 1490 YGRTECFRVEKNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRAL 1535
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFFRND-----KNQF-IKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K F +K + KFHVL+T++E+I D L W +
Sbjct: 822 SRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLV 881
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L ++H++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 882 VDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 941
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 942 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILT 1001
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L S+G N +L+N MM+L+KCC HPYL
Sbjct: 1002 RNFEALNSRG--GGNQVSLLNIMMDLKKCCNHPYLF 1035
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 79/159 (49%), Gaps = 34/159 (21%)
Query: 7 PKKKPPASDWVKLEKSP--VYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P P VK E P + TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMG----- 764
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDL 123
LGKTIQ++ F+ +++K G +GPFLV APLSTI NW+REF+ W
Sbjct: 765 --------------LGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWA-- 808
Query: 124 NVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D K G
Sbjct: 809 ------PKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGG 841
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REF+ W V+ Y G +
Sbjct: 774 FLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDK 820
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 805 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 864
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 865 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 924
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 925 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 984
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 985 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1018
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 691 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 747
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 748 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 791
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 792 PDMYVVTY 799
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 757 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 803
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E E F ++ K +K++ KFHVL+T++E+I D L +W I
Sbjct: 812 SRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLLTSYELITIDMAILGSIDWACLI 871
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L L+H++LL+GTPLQNN+ ELF LLNFL P++F N E F+
Sbjct: 872 VDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNLEELFHLLNFLTPERFHNLEGFL 931
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL +L P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 932 EEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILT 991
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ N +L+N +M+L+KCC HPYL
Sbjct: 992 RNFEALN-ARGGGNQVSLLNVVMDLKKCCNHPYLF 1025
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 23/128 (17%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
++P + P VK E+ P Y TL YQ+EGLNWL FSW G + ILADEMG
Sbjct: 698 ERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMG--- 754
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q+ F+ +++K G +GPFLV APLSTI NW+REFE W
Sbjct: 755 ----------------LGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWA 798
Query: 122 -DLNVIVY 128
D+ V+ Y
Sbjct: 799 PDMYVVTY 806
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G +GPFLV APLSTI NW+REFE W D+ V+ Y G +
Sbjct: 764 FLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDK 810
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 298 SRNMLQEYELFF-----RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCI 351
SR++++E E F R+ K F +K++ KFHVL+T++E+I D L W +
Sbjct: 786 SRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLV 845
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN K L +++++LL+GTPLQNN+ ELF LLNFL P++F+N E F+
Sbjct: 846 VDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFL 905
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
EF + E ++ KL LL P MLRRLK DV K++ K E +V VEL+ +QKKYY+ IL
Sbjct: 906 EEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILT 965
Query: 472 RNFSFL-SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L SKG N +L+N MM+L+KCC HPYL
Sbjct: 966 RNFEALNSKG--GGNQVSLLNIMMDLKKCCNHPYLF 999
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 83/161 (51%), Gaps = 34/161 (21%)
Query: 5 KKPKKKPPASDWVKLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
+KP P VK +K P Y TL YQLEGLNWL FSW G + ILADEMG
Sbjct: 672 EKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMG--- 728
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT 121
LGKT+Q++ F+ +++K G +GP+LV APLSTI NW+REFE W
Sbjct: 729 ----------------LGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWA 772
Query: 122 DLNVIVYHATFVVLLQTGSKFFRICL---EF-FVDAVFKTG 158
F V+ TG K R + EF F D ++G
Sbjct: 773 --------PDFYVVTYTGDKESRSVIRENEFSFEDNAIRSG 805
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLS 198
F+ +++K G +GP+LV APLSTI NW+REFE W D V+ Y G ++ S
Sbjct: 738 FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRS 788
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog
OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 136/215 (63%), Gaps = 7/215 (3%)
Query: 298 SRNMLQEYELFFRND------KNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCI 351
SR +++E+E F + K IK + KFHVL+T++E I D L +W +
Sbjct: 702 SRMVIREHEFSFVDGAVRGGPKVSKIKTLENLKFHVLLTSYECINMDKAILSSIDWAALV 761
Query: 352 IDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM 411
+DEAHRLKN + LR ++++RVLL+GTPLQNN+ ELF LLNFL P +F+ E+F
Sbjct: 762 VDEAHRLKNNQSTFFKNLREYNIQYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFT 821
Query: 412 SEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILE 471
+EF ++ E ++ KL LL P MLRRLK DV + K+E +V VEL+ +QKKYY+ IL
Sbjct: 822 AEFSEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILT 881
Query: 472 RNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
RNF L+ + +L+N +MEL+KCC HPYL
Sbjct: 882 RNFDALNVKNGGTQM-SLINIIMELKKCCNHPYLF 915
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 70/135 (51%), Gaps = 32/135 (23%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
L YQLEG+NWL W NG + ILADEMGLG KT+QSLTF+
Sbjct: 616 LHPYQLEGINWLRHCWSNGTDAILADEMGLG-------------------KTVQSLTFLY 656
Query: 91 AVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVVLLQTGSKFFRICL-- 147
+ K G +GPFL+ APLSTI NW+RE E W F V+ G + R+ +
Sbjct: 657 TLMKEGHTKGPFLIAAPLSTIINWEREAELWC--------PDFYVVTYVGDRESRMVIRE 708
Query: 148 -EF-FVDAVFKTGIR 160
EF FVD + G +
Sbjct: 709 HEFSFVDGAVRGGPK 723
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRRK 195
F+ + K G +GPFL+ APLSTI NW+RE E W D V+ Y G R+
Sbjct: 654 FLYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRE 701
>sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa
subsp. japonica GN=Os01g0367900 PE=2 SV=2
Length = 1107
Score = 175 bits (443), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/189 (46%), Positives = 131/189 (69%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF V +T+FE+ I + LK F+WR IIDEAHR+KN N L + +R+ + +R+L++GT
Sbjct: 330 KFDVCVTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGT 389
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL+SLLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 390 PLQNNLHELWSLLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 448
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YYR +L+++ ++ G L+N M+LRKC
Sbjct: 449 SDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINAG---GERKRLLNIAMQLRKC 505
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 506 CNHPYLFQG 514
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 18/88 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 231 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLGYLH 274
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFE 118
GI GP +V+AP ST+ NW +E +
Sbjct: 275 EF--RGITGPHMVVAPKSTLGNWIKEIQ 300
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 295 ASASRNMLQEYELFFRNDKNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
+R +++++E+ F + ++E YKF+V++T++E I D L +W ++D
Sbjct: 350 GKTARAVIRKHEISFEEVTTKTMRENQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVD 409
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRL++ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ + F +E
Sbjct: 410 EAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAE 469
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L+P MLRRLK DV KS+ PK E +V VEL+++QKK+Y+ IL +N
Sbjct: 470 FTDVSKEEQVKRLHEILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKN 529
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
F L++ V +L+N MM+LRKCC HPYL
Sbjct: 530 FKALNQ-KGGGRVCSLLNIMMDLRKCCNHPYLF 561
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 23/115 (20%)
Query: 18 KLEKSPVYKNDNTLR--AYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
K E PV+ + L+ +Q+EG++WL +SW G ILADEMGL
Sbjct: 252 KYEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGL--------------- 296
Query: 76 EMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GKTIQ++ F+ ++FK G RGPFL+ PLST+ NW+RE E W +L + Y
Sbjct: 297 ----GKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTY 347
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
F+ ++FK G RGPFL+ PLST+ NW+RE E W +L + Y G
Sbjct: 305 FLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVG 349
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 133/222 (59%), Gaps = 10/222 (4%)
Query: 291 GLKSASASRNMLQEYELFF------RNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKD 344
GL+ A R +L+E+E F K +K + KFHVL+T++E I D L
Sbjct: 684 GLRDA---RVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVLLTSYETINMDKTILSS 740
Query: 345 FNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQF 404
W ++DEAHRLKN + L + +RVLL+GTPLQNN+ ELF LLNFL ++F
Sbjct: 741 IEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPLQNNLEELFHLLNFLSKERF 800
Query: 405 SNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKK 464
+ EAF +EF ++ E ++ KL LL P MLRRLK DV + K E +V VEL+ +QKK
Sbjct: 801 NQLEAFTAEFNEISKEDQIEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKK 860
Query: 465 YYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+Y+ IL RNF L+ + +LMN +MEL+KCC HPYL
Sbjct: 861 WYKNILTRNFDALNVKNGGTQM-SLMNVLMELKKCCNHPYLF 901
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 77/151 (50%), Gaps = 34/151 (22%)
Query: 18 KLEKSPVY--KNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
K E P Y + L YQLEGLNWL W NG + ILADEMGLG
Sbjct: 587 KYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLG-------------- 632
Query: 76 EMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHATFVV 134
KT+QSLTF+ ++ K G +GPFL+ APLSTI NW+RE E W F V
Sbjct: 633 -----KTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQWC--------PDFYV 679
Query: 135 LLQTGSKFFRICL---EF-FVDAVFKTGIRG 161
+ G + R+ L EF FV+ ++G +
Sbjct: 680 VTYVGLRDARVVLREHEFSFVEGAVRSGPKA 710
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHGRR 194
F+ ++ K G +GPFL+ APLSTI NW+RE E W D V+ Y G R
Sbjct: 640 FLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLR 686
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis
thaliana GN=PKL PE=1 SV=1
Length = 1384
Score = 172 bits (437), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 124/185 (67%), Gaps = 2/185 (1%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF VL+T++E+I D LK W I+DE HRLKN++ KL L HR+LL+GT
Sbjct: 393 KFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGT 452
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVE 443
PLQNN++ELF L++FL+ +F + E F EF + E ++++L +L P +LRR+K+DV
Sbjct: 453 PLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHLLRRVKKDVM 512
Query: 444 KSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHP 503
K + PK+E ++ V+L+++QK+YY+ I RN+ L+K A + +L N MMELRK C HP
Sbjct: 513 KDMPPKKELILRVDLSSLQKEYYKAIFTRNYQVLTK-KGGAQI-SLNNIMMELRKVCCHP 570
Query: 504 YLLNG 508
Y+L G
Sbjct: 571 YMLEG 575
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 61/102 (59%), Gaps = 21/102 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
L YQLEGLN+L FSW + ILADEMGLGKTIQS+ +LA
Sbjct: 273 LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSI---ALLA---------------- 313
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
++F+ + P LVIAPLST+ NW+REF W +NV++Y T
Sbjct: 314 SLFEENLI-PHLVIAPLSTLRNWEREFATWAPQMNVVMYFGT 354
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 162 PFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
P LVIAPLST+ NW+REF W +NV++Y G
Sbjct: 322 PHLVIAPLSTLRNWEREFATWAPQMNVVMYFG 353
>sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPase chain OS=Arabidopsis
thaliana GN=At3g06400 PE=2 SV=3
Length = 1055
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 130/189 (68%), Gaps = 8/189 (4%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
KF + +T+FE+ I + L+ F+WR IIDEAHR+KN N L + +RL +R+L++GT
Sbjct: 288 KFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGT 347
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P+ FS+ E F E+ Q+ E++ V +L +L+P +LRRLK
Sbjct: 348 PLQNNLHELWALLNFLLPEIFSSAETF-DEWFQISGENDQQEVVQQLHKVLRPFLLRRLK 406
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKC 499
DVEK + PK+ET+++V ++ +QK+YY+ +L+++ ++ G L+N M+LRKC
Sbjct: 407 SDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLEAVNAG---GERKRLLNIAMQLRKC 463
Query: 500 CIHPYLLNG 508
C HPYL G
Sbjct: 464 CNHPYLFQG 472
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 48/87 (55%), Gaps = 18/87 (20%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
+R YQL GLNWL+ + NG N ILADEMGLGKT+Q TI L ++
Sbjct: 189 MRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQ----------------TISLLAYLH 232
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREF 117
GI GP +V+AP ST+ NW E
Sbjct: 233 EY--RGINGPHMVVAPKSTLGNWMNEI 257
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila
melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 5/213 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDL----YKFHVLITTFEIIISDCLELKDFNWRLCIID 353
SR +++E EL F + K L YKF+VL+T++E+I D L +W + ++D
Sbjct: 816 SRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVD 875
Query: 354 EAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSE 413
EAHRLK+ K L + +++LL+GTPLQNN+ ELF LLNFL +F++ +AF E
Sbjct: 876 EAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEELFHLLNFLSRDKFNDLQAFQGE 935
Query: 414 FGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERN 473
F + E +V +L +L P MLRRLK DV K++ K E +V VEL+ +QKK+Y+ IL +N
Sbjct: 936 FADVSKEEQVKRLHEMLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKN 995
Query: 474 FSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+ L+ + + +L+N MM+L+KCC HPYL
Sbjct: 996 YEALNSKSGGGSC-SLINIMMDLKKCCNHPYLF 1027
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 68/126 (53%), Gaps = 23/126 (18%)
Query: 7 PKKKPPASDWVKLEKSPVYKNDN--TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTI 64
P +KP K E P + L YQ+EG+NWL +SW G + ILADEMGL
Sbjct: 704 PPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGL---- 759
Query: 65 QSLTRNCILADEMGLGKTIQSLTFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-D 122
GKTIQ++TF+ +++K G RGPFLV PLST+ NW+REFE W D
Sbjct: 760 ---------------GKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPD 804
Query: 123 LNVIVY 128
I Y
Sbjct: 805 FYCITY 810
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 150 FVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
F+ +++K G RGPFLV PLST+ NW+REFE W D I Y G +
Sbjct: 768 FLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDK 814
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 131/210 (62%), Gaps = 5/210 (2%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR+ ++EYE + N K K KF+VL+TT+E I+ D EL W+ +DEAHR
Sbjct: 462 SRDTIREYEFY----TNPRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHR 517
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN L E L + +R+L++GTPLQNN+ EL +L+NFL P +F+ ++ E
Sbjct: 518 LKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDE 577
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E ++ L ++P +LRRLK+DVEKS+ K E ++ VEL+++Q +YY+ IL +N+S L
Sbjct: 578 EQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSAL 637
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLN 507
+ G + +L+N M EL+K HPYL +
Sbjct: 638 TAGAKGGHF-SLLNIMNELKKASNHPYLFD 666
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 59/112 (52%), Gaps = 19/112 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
KL P + LR +QL G+NW+ F W G N ILADEMGLGKT+Q
Sbjct: 363 KLSVQPPFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQ------------ 410
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
T+ ++++ +F GP +++ PLST+P W FE W DLN I Y
Sbjct: 411 ----TVAFISWL--IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICY 456
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 154 VFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK 195
+F GP +++ PLST+P W FE W DLN I Y G +K
Sbjct: 419 IFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQK 461
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW1 PE=1
SV=2
Length = 1129
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 124/190 (65%), Gaps = 7/190 (3%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
F V+I ++EIII + LK NW IIDEAHR+KN L + LR +R+L++GTP
Sbjct: 296 FDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTP 355
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLKE 440
LQNN++EL++LLNFL P FS+ + F F TE + V +L +L+P +LRR+K
Sbjct: 356 LQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIVKQLHTVLQPFLLRRIKS 415
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL--SKGTTSANVPNLMNTMMELRK 498
DVE S+ PK+E + V ++++QKK+Y+ ILE++ + S G+ + L+N MM+LRK
Sbjct: 416 DVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKT-RLLNIMMQLRK 474
Query: 499 CCIHPYLLNG 508
CC HPYL +G
Sbjct: 475 CCNHPYLFDG 484
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 66/126 (52%), Gaps = 20/126 (15%)
Query: 3 LIKKPKKKPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGK 62
L+K+ S + +SP Y N LR YQ++G+NWL+ N ILADEMGLGK
Sbjct: 169 LLKEEDSDDDESIEFQFRESPAYVN-GQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGK 227
Query: 63 TIQSLTRNCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT- 121
T+Q TI L ++ + K I GPFLVIAP ST+ NW RE WT
Sbjct: 228 TLQ----------------TISFLGYLRYIEK--IPGPFLVIAPKSTLNNWLREINRWTP 269
Query: 122 DLNVIV 127
D+N +
Sbjct: 270 DVNAFI 275
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
I GPFLVIAP ST+ NW RE WT D+N + G +++
Sbjct: 244 IPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEE 282
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 129/200 (64%), Gaps = 5/200 (2%)
Query: 313 KNQFIKEKDL-YKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRL 371
+NQ +++ L KF V TT+E+++ +LK NWR IIDEAHR+KN KL E +R
Sbjct: 219 RNQVLRDVILPQKFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRE 278
Query: 372 LHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE---VNKLQL 428
L+ E+R+L++GTPLQNN++EL++LLNFL P F++++ F S F V +L
Sbjct: 279 LNSENRLLITGTPLQNNLHELWALLNFLLPDIFTSSDDFDSWFSNDAMSGNTDLVQRLHK 338
Query: 429 LLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPN 488
+L+P +LRR+K DVEKS+ PK+E V V L+ +Q+++Y +L ++ ++ G
Sbjct: 339 VLQPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQREWYTKVLMKDIDIIN-GAGKVEKAR 397
Query: 489 LMNTMMELRKCCIHPYLLNG 508
LMN +M LRKC HPYL +G
Sbjct: 398 LMNILMHLRKCVNHPYLFDG 417
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 19/116 (16%)
Query: 13 ASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCI 72
+ D V +KSP Y + +R YQ+ GLNWL N N ILADEMGLGKT+Q+++
Sbjct: 114 SDDLVIFDKSPFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISM--- 170
Query: 73 LADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIV 127
+G K ++ P LVI P ST+ NW EF+ W +N +V
Sbjct: 171 ----IGYMKHYKNKA-----------SPHLVIVPKSTLQNWANEFKKWCPSINAVV 211
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHG 192
P LVI P ST+ NW EF+ W +N +V G
Sbjct: 182 SPHLVIVPKSTLQNWANEFKKWCPSINAVVLIG 214
>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1
PE=1 SV=2
Length = 1710
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 132/209 (63%), Gaps = 10/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRNM++ +E K KF++L+TT+EI++ D L NW +DEAHR
Sbjct: 567 SRNMIRTHEWTHHQTKR--------LKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHR 618
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L HR+L++GTPLQN++ EL+SLL+F+ P++FS+ E F E G+
Sbjct: 619 LKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKG 678
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E L L+P +LRR+K+DVEKS+ K E ++ +E++ +QK+YY+ IL RN+ L
Sbjct: 679 R-EYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKAL 737
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
SKG + + +N MMEL+KCC H YL+
Sbjct: 738 SKG-SKGSTSGFLNIMMELKKCCNHCYLI 765
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 70/118 (59%), Gaps = 24/118 (20%)
Query: 16 WVKLEKSPVYKNDNT---LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCI 72
+V L+K P Y + LR YQL GLNWL SW G +CILADEMG
Sbjct: 463 FVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMG------------- 509
Query: 73 LADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVY 128
LGKTIQ+++F++ +F + + GPFL++ PLST+ +WQRE + W + +N +VY
Sbjct: 510 ------LGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVY 561
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHG 192
GPFL++ PLST+ +WQRE + W + +N +VY G
Sbjct: 531 GPFLLVVPLSTLTSWQREIQTWASQMNAVVYLG 563
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 131/209 (62%), Gaps = 10/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRN ++EYE K KF+ LITT+EI++ D L NW +DEAHR
Sbjct: 570 SRNTIREYEWIHSQTKR--------LKFNALITTYEILLKDKTVLGSINWAFLGVDEAHR 621
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L HR+L++GTPLQN++ EL+SLL+F+ P++F E F + G+
Sbjct: 622 LKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFEFWEDFEEDHGKG 681
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E+ L +L+P +LRR+K+DVEKS+ K E ++ VE++ +QK+YY+ IL RN+ L
Sbjct: 682 R-ENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRNYKAL 740
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
+KGT + +N +MEL+KCC H YL+
Sbjct: 741 AKGTR-GSTSGFLNIVMELKKCCNHCYLI 768
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 68/116 (58%), Gaps = 21/116 (18%)
Query: 16 WVKLEKSPVYKNDNTL--RAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCIL 73
+V L+K P Y L R YQLEGLNWL SW + ILADEMGLGKTIQ
Sbjct: 467 FVALKKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQ-------- 518
Query: 74 ADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
TI L+++ + + GPFL++ PLST+ +WQREFE W ++NV+VY
Sbjct: 519 --------TISFLSYL--FHQHQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVY 564
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFL++ PLST+ +WQREFE W ++NV+VY G
Sbjct: 534 GPFLIVVPLSTLTSWQREFEIWAPEINVVVYIG 566
>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus GN=Chd1
PE=1 SV=3
Length = 1711
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/209 (42%), Positives = 132/209 (63%), Gaps = 10/209 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SRNM++ +E K KF++L+TT+EI++ D L NW +DEAHR
Sbjct: 565 SRNMIRTHEWMHPQTKR--------LKFNILLTTYEILLKDKAFLGGLNWAFIGVDEAHR 616
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L HR+L++GTPLQN++ EL+SLL+F+ P++FS+ E F E G+
Sbjct: 617 LKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKG 676
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ E L L+P +LRR+K+DVEKS+ K E ++ +E++ +QK+YY+ IL RN+ L
Sbjct: 677 R-EYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKAL 735
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLL 506
SKG + + +N MMEL+KCC H YL+
Sbjct: 736 SKG-SKGSTSGFLNIMMELKKCCNHCYLI 763
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 70/118 (59%), Gaps = 24/118 (20%)
Query: 16 WVKLEKSPVYKNDNT---LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCI 72
+V L+K P Y + LR YQL GLNWL SW G +CILADEMG
Sbjct: 461 FVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMG------------- 507
Query: 73 LADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVY 128
LGKTIQ+++F++ +F + + GPFL++ PLST+ +WQRE + W + +N +VY
Sbjct: 508 ------LGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVY 559
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHG 192
GPFL++ PLST+ +WQRE + W + +N +VY G
Sbjct: 529 GPFLLVVPLSTLTSWQREIQTWASQMNAVVYLG 561
>sp|B6ZLK2|CHD1_CHICK Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus
GN=CHD1 PE=1 SV=1
Length = 1719
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 132/210 (62%), Gaps = 10/210 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
SRNM++ +E K KF++L+TT+EI++ D L NW +DEAH
Sbjct: 562 TSRNMIRTHEWMHPQTKR--------LKFNILLTTYEILLKDKSFLGGLNWAFIGVDEAH 613
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN + L + L HR+L++GTPLQN++ EL+SLL+F+ P++FS+ E F E G+
Sbjct: 614 RLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGK 673
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
+ E L L+P +LRR+K+DVEKS+ K E ++ +E++ +QK+YY+ IL RN+
Sbjct: 674 GR-EYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKA 732
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYLL 506
LSKG + + +N MMEL+KCC H YL+
Sbjct: 733 LSKG-SKGSTSGFLNIMMELKKCCNHCYLI 761
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 69/118 (58%), Gaps = 24/118 (20%)
Query: 16 WVKLEKSPVYKNDNT---LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCI 72
+V L+K P Y + LR YQL GLNWL SW G +CILADEMG
Sbjct: 459 FVALKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMG------------- 505
Query: 73 LADEMGLGKTIQSLTFVDAVF-KTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
LGKTIQ+++F++ +F + + GPFL++ PLST+ +WQRE + W +N +VY
Sbjct: 506 ------LGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVY 557
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
GPFL++ PLST+ +WQRE + W +N +VY G
Sbjct: 527 GPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLG 559
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 128/213 (60%), Gaps = 7/213 (3%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ SR ++EYE + + + KF++L+TT+E I+ D EL + W+ IDEA
Sbjct: 474 TESRANIREYEFYLSTNSRKL-------KFNILLTTYEYILKDKQELNNIRWQYLAIDEA 526
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN L E L +R+L++GTPLQNN+ EL SL+NFL P +F + +
Sbjct: 527 HRLKNSESSLYETLSQFRTANRLLITGTPLQNNLKELASLVNFLMPGKFYIRDELNFDQP 586
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
+ E ++ LQ L+P +LRRLK+DVEKS+ K E ++ VEL+++Q ++Y+ IL +N+
Sbjct: 587 NAEQERDIRDLQERLQPFILRRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTKNYR 646
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L+ T +L+N ++EL+K HPYL G
Sbjct: 647 ALTGHTDGRGQLSLLNIVVELKKVSNHPYLFPG 679
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 65/120 (54%), Gaps = 22/120 (18%)
Query: 10 KPPASDWVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTR 69
+PP + KLEK P Y +R +QL G+NW+ + W N ILADEMGLGKT+Q++
Sbjct: 372 RPP---YRKLEKQPSYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTV-- 426
Query: 70 NCILADEMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
C L+ + SL GPFL++ PLST+P WQ WT DLN I Y
Sbjct: 427 -CFLS------YLVHSLK---------QHGPFLIVVPLSTVPAWQETLANWTPDLNSICY 470
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 139 GSKFFRIC-LEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
G +C L + V ++ + GPFL++ PLST+P WQ WT DLN I Y G
Sbjct: 420 GKTVQTVCFLSYLVHSLKQ---HGPFLIVVPLSTVPAWQETLANWTPDLNSICYTG 472
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 124/188 (65%), Gaps = 4/188 (2%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
++ V +T++E++I + K FNWR +IDEAHR+KN KL E +R +R+LL+GT
Sbjct: 279 EWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 338
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ---LKTESEVNKLQLLLKPMMLRRLKE 440
PLQNN++EL+SLLNFL P F++ + F S F L + V +L ++L+P +LRR+K
Sbjct: 339 PLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 398
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
DVEKS+ PK+E + V L+ +Q+++Y IL ++ L+ + L+N +M+LRKCC
Sbjct: 399 DVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKM-RLLNILMQLRKCC 457
Query: 501 IHPYLLNG 508
HPYL +G
Sbjct: 458 NHPYLFDG 465
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 18/104 (17%)
Query: 17 VKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADE 76
+ E SP Y LR YQ+ GLNWL+ + NG N ILADEMGLGKT+Q+++
Sbjct: 166 TRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISL------- 218
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW 120
+G K ++ I GP +V+ P ST+ NW EF+ W
Sbjct: 219 LGYMKHYRN-----------IPGPHMVLVPKSTLHNWMSEFKRW 251
Score = 32.7 bits (73), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW 182
I GP +V+ P ST+ NW EF+ W
Sbjct: 228 IPGPHMVLVPKSTLHNWMSEFKRW 251
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 124/188 (65%), Gaps = 4/188 (2%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
++ V +T++E++I + K FNWR +IDEAHR+KN KL E +R +R+LL+GT
Sbjct: 278 EWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 337
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ---LKTESEVNKLQLLLKPMMLRRLKE 440
PLQNN++EL+SLLNFL P F++ + F S F L + V +L ++L+P +LRR+K
Sbjct: 338 PLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 397
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
DVEKS+ PK+E + V L+ +Q+++Y IL ++ L+ + L+N +M+LRKCC
Sbjct: 398 DVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKM-RLLNILMQLRKCC 456
Query: 501 IHPYLLNG 508
HPYL +G
Sbjct: 457 NHPYLFDG 464
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 57/104 (54%), Gaps = 18/104 (17%)
Query: 17 VKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADE 76
+ E SP Y LR YQ+ GLNWL+ + NG N ILADEMGLGKT+Q+++
Sbjct: 165 TRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISL------- 217
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW 120
+G K ++ I GP +V+ P ST+ NW EF+ W
Sbjct: 218 LGYMKHYRN-----------IPGPHMVLVPKSTLHNWMSEFKKW 250
Score = 33.1 bits (74), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAW 182
I GP +V+ P ST+ NW EF+ W
Sbjct: 227 IPGPHMVLVPKSTLHNWMSEFKKW 250
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
SV=1
Length = 1120
Score = 155 bits (393), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 125/190 (65%), Gaps = 5/190 (2%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
+F VLIT++E++I + LK W+ +IDEAHR+KN L + +RL + ++R+L++GT
Sbjct: 283 RFDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGT 342
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKTESE----VNKLQLLLKPMMLRRLK 439
PLQNN++EL++LLNFL P F ++E F F Q +E + + +L +L P +LRR+K
Sbjct: 343 PLQNNLHELWALLNFLLPDIFGDSELFDEWFEQNNSEQDQEIVIQQLHSVLNPFLLRRVK 402
Query: 440 EDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-TSANVPNLMNTMMELRK 498
DVEKS+ PK ET V V +T++Q ++Y+ +LE++ ++ L+N +M+LRK
Sbjct: 403 ADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRK 462
Query: 499 CCIHPYLLNG 508
CC HPYL G
Sbjct: 463 CCNHPYLFEG 472
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 65/113 (57%), Gaps = 19/113 (16%)
Query: 19 LEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMG 78
+ +SP + LR YQ++GLNWL+ N + ILADEMGLGKT+Q
Sbjct: 172 VSESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQ------------- 218
Query: 79 LGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
TI L ++ V + I GPFL+I P ST+ NW+REF WT ++NV+V H
Sbjct: 219 ---TISFLGYLRYVKQ--IEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHG 266
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRR 194
I GPFL+I P ST+ NW+REF WT ++NV+V HG +
Sbjct: 232 IEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDK 268
>sp|A9X4T1|CHD1_BOMMO Chromodomain-helicase-DNA-binding protein 1 OS=Bombyx mori GN=CHD1
PE=1 SV=1
Length = 1365
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 134/209 (64%), Gaps = 10/209 (4%)
Query: 297 ASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAH 356
+SR++++++E F + K KF+ ++TT+EI++ D L+ F+W ++DEAH
Sbjct: 290 SSRDIIRQFEWSFSSSKR--------LKFNAILTTYEILLKDRQFLRSFSWACLLVDEAH 341
Query: 357 RLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ 416
RLKN + L + L+ HR+L++GTPLQN++ EL++LL+F+ P +F + E F +
Sbjct: 342 RLKNDDSLLYKALKEFDTNHRLLVTGTPLQNSLKELWALLHFIMPYKFESWEDFEKDHED 401
Query: 417 LKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSF 476
T+ KL L+P +LRR K+DVEKS+ K E ++ VE+T+IQK+YY+ IL +N+S
Sbjct: 402 AATKG-YEKLHKQLEPFILRRQKKDVEKSLPAKVEQILRVEMTSIQKQYYKWILTKNYSA 460
Query: 477 LSKGTTSANVPNLMNTMMELRKCCIHPYL 505
L KG ++ +N ++EL+KCC H L
Sbjct: 461 LRKG-VKGSINTFINIVIELKKCCNHALL 488
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 24/116 (20%)
Query: 18 KLEKSPVYKNDNT---LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILA 74
++++ P Y ++ LR YQ++GLNWL+ SW + ILADEMGL
Sbjct: 189 QIKEQPEYVGKDSSYHLRDYQMDGLNWLIHSWCKDNSVILADEMGL-------------- 234
Query: 75 DEMGLGKTIQSLTFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
GKTIQ++ F+ +FK+ + GPFL + PLST+ WQREF+ W D+NV+ Y
Sbjct: 235 -----GKTIQTICFLYYLFKSQHLYGPFLCVVPLSTMTAWQREFQQWAPDINVVTY 285
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Query: 139 GSKFFRICLEFFVDAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
G IC +++ FK+ + GPFL + PLST+ WQREF+ W D+NV+ Y G
Sbjct: 235 GKTIQTICFLYYL---FKSQHLYGPFLCVVPLSTMTAWQREFQQWAPDINVVTYIG---D 288
Query: 197 LSRRD 201
+S RD
Sbjct: 289 VSSRD 293
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 132/213 (61%), Gaps = 8/213 (3%)
Query: 296 SASRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEA 355
+ SR ++++YE + D Q IK F++L+TT+E ++ D L + W+ IDEA
Sbjct: 459 TTSRQVIRDYEFYV--DGTQKIK------FNLLLTTYEYVLKDRSVLSNIKWQYMAIDEA 510
Query: 356 HRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG 415
HRLKN L E L +R+L++GTPLQNN+ EL +L++FL P +F E E
Sbjct: 511 HRLKNSESSLYEALSQFKNSNRLLITGTPLQNNIRELAALVDFLMPGKFEIREEINLEAP 570
Query: 416 QLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFS 475
+ E+ + LQ L+P +LRRLK+DVEKS+ K E ++ VEL+++Q +Y+ IL RN+
Sbjct: 571 DEEQEAYIRSLQEHLQPYILRRLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTRNYR 630
Query: 476 FLSKGTTSANVPNLMNTMMELRKCCIHPYLLNG 508
L++ +S + +L+N ++EL+K HPYL +G
Sbjct: 631 VLTQSISSGSQISLLNIVVELKKASNHPYLFDG 663
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 71/142 (50%), Gaps = 25/142 (17%)
Query: 16 WVKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILAD 75
+ KLE+ P Y LR +QL G+NW+ + W N ILADEMGLGKT+Q
Sbjct: 360 YRKLEQQPSYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQ---------- 409
Query: 76 EMGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHATFVV 134
T+ L+++ + GPFLV+ PLST+P WQ W +D+N I Y
Sbjct: 410 ------TVAFLSYLAHSLRQ--HGPFLVVVPLSTVPAWQETLALWASDMNCISY------ 455
Query: 135 LLQTGSKFFRICLEFFVDAVFK 156
L T S+ EF+VD K
Sbjct: 456 LGNTTSRQVIRDYEFYVDGTQK 477
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 161 GPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHG 192
GPFLV+ PLST+P WQ W +D+N I Y G
Sbjct: 425 GPFLVVVPLSTVPAWQETLALWASDMNCISYLG 457
>sp|Q7KU24|CHD1_DROME Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila
melanogaster GN=Chd1 PE=1 SV=1
Length = 1883
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 131/216 (60%), Gaps = 10/216 (4%)
Query: 298 SRNMLQEYELFFRNDKNQFIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
SR ++Q+YE F + K KF+ ++TT+EI++ D L W ++DEAHR
Sbjct: 614 SRELIQQYEWQFESSKR--------LKFNCILTTYEIVLKDKQFLGTLQWAALLVDEAHR 665
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQL 417
LKN + L + L+ HR+L++GTPLQN++ EL++LL+F+ P +F E F + G
Sbjct: 666 LKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIMPDKFDTWENFEVQHGNA 725
Query: 418 KTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFL 477
+ + +L L+P +LRR+K+DVEKS+ K E ++ VE+T++QK+YY+ IL +NF L
Sbjct: 726 EDKG-YTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNFDAL 784
Query: 478 SKGTTSANVPNLMNTMMELRKCCIHPYLLNGKTYLL 513
KG + +N ++EL+KCC H L+ + L
Sbjct: 785 RKG-KRGSTSTFLNIVIELKKCCNHAALIRPSEFEL 819
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 62/101 (61%), Gaps = 21/101 (20%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
TLR YQ++GLNWL+ SW + ILADEMGLGKTIQ++ C F+
Sbjct: 527 TLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTI---C----------------FL 567
Query: 90 DAVFKT-GIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
++FK + GPFL + PLST+ WQREF+ W D+NV+ Y
Sbjct: 568 YSLFKIHHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTY 608
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 139 GSKFFRICLEFFVDAVFKTG-IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
G IC F+ ++FK + GPFL + PLST+ WQREF+ W D+NV+ Y G
Sbjct: 558 GKTIQTIC---FLYSLFKIHHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLG 610
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 122/185 (65%), Gaps = 4/185 (2%)
Query: 327 VLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQ 386
V +T++E++I + K F+WR +IDEAHR+KN KL E +R +R+LL+GTPLQ
Sbjct: 289 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQ 348
Query: 387 NNVNELFSLLNFLEPQQFSNNEAFMSEFGQ---LKTESEVNKLQLLLKPMMLRRLKEDVE 443
NN++EL++LLNFL P F++ + F S F L + V +L +LKP +LRR+K DVE
Sbjct: 349 NNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVE 408
Query: 444 KSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHP 503
KS+ PK+E + + L+ +Q+++Y IL ++ L+ + + L+N +M+LRKCC HP
Sbjct: 409 KSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLN-SSGKMDKMRLLNILMQLRKCCNHP 467
Query: 504 YLLNG 508
YL +G
Sbjct: 468 YLFDG 472
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 59/113 (52%), Gaps = 19/113 (16%)
Query: 17 VKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADE 76
V+ E SP Y LR YQ+ GLNWL+ + NG N ILADEMGLGKT+Q
Sbjct: 173 VRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQ----------- 221
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
TI L ++ I GP +V+ P ST+ NW EF+ W L VI +
Sbjct: 222 -----TIALLGYLKHY--RNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICF 267
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
I GP +V+ P ST+ NW EF+ W L VI + G
Sbjct: 235 IPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVG 269
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/185 (42%), Positives = 122/185 (65%), Gaps = 4/185 (2%)
Query: 327 VLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTPLQ 386
V +T++E++I + K F+WR +IDEAHR+KN KL E +R +R+LL+GTPLQ
Sbjct: 285 VCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQ 344
Query: 387 NNVNELFSLLNFLEPQQFSNNEAFMSEFGQ---LKTESEVNKLQLLLKPMMLRRLKEDVE 443
NN++EL++LLNFL P F++ + F S F L + V +L +LKP +LRR+K DVE
Sbjct: 345 NNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERLHAVLKPFLLRRIKTDVE 404
Query: 444 KSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCIHP 503
KS+ PK+E + + L+ +Q+++Y IL ++ L+ + + L+N +M+LRKCC HP
Sbjct: 405 KSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLN-SSGKMDKMRLLNILMQLRKCCNHP 463
Query: 504 YLLNG 508
YL +G
Sbjct: 464 YLFDG 468
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 59/113 (52%), Gaps = 19/113 (16%)
Query: 17 VKLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADE 76
++ E SP Y LR YQ+ GLNWL+ + NG N ILADEMGLGKT+Q
Sbjct: 169 IRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQ----------- 217
Query: 77 MGLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
TI L ++ I GP +V+ P ST+ NW EF+ W L VI +
Sbjct: 218 -----TIALLGYLKHY--RNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICF 263
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
I GP +V+ P ST+ NW EF+ W L VI + G
Sbjct: 231 IPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVG 265
>sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio
GN=chd1l PE=2 SV=1
Length = 1026
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 120/188 (63%), Gaps = 5/188 (2%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
+FHVL+TT+E+ + D LK + W++ ++DEAHRLKN+ L + L+ + RVLL+GT
Sbjct: 134 RFHVLLTTYEMCLKDARYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGT 193
Query: 384 PLQNNVNELFSLLNFLEPQQF--SNNEAFMSEFGQLKTESE-VNKLQLLLKPMMLRRLKE 440
P+QNN+ E++SLL F++P F E F++ + ++TE V++L +L+P +LRR+K
Sbjct: 194 PIQNNLQEVYSLLTFIQPSVFLPEAVEDFVNAYADIQTEPALVDELHQVLQPFLLRRVKA 253
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
+V + K E VV L+ +QK+YY+ IL R+ T + L+N +M+LRKC
Sbjct: 254 EVAAELPKKTELVVFHGLSALQKRYYKAILMRDLDAFR--TDQSTKTRLLNVLMQLRKCV 311
Query: 501 IHPYLLNG 508
HPYL +G
Sbjct: 312 DHPYLFDG 319
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 52/99 (52%), Gaps = 19/99 (19%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR YQL+G+ WL N + CIL DEMGLGKT Q TI L +
Sbjct: 35 LRPYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQ----------------TISLLAYAR 78
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY 128
K + GPFLV+ PL+ + NW++E E + L+VI Y
Sbjct: 79 GSLK--MNGPFLVLCPLAVLENWRQELERFCPSLSVICY 115
Score = 39.3 bits (90), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
+ GPFLV+ PL+ + NW++E E + L+VI Y G ++K
Sbjct: 83 MNGPFLVLCPLAVLENWRQELERFCPSLSVICYTGDKEK 121
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 128/203 (63%), Gaps = 5/203 (2%)
Query: 310 RNDKNQFIKEKDLY-KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEG 368
++ +N FI++ + ++ V +T++E+ I + K FNWR +IDEAHR+KN KL E
Sbjct: 212 QDTRNTFIRDVLMPGEWDVCVTSYEMCIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEI 271
Query: 369 LRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQ---LKTESEVNK 425
LR +R+L++GTPLQNN++EL++LLNFL P F+++E F F L ++ + +
Sbjct: 272 LREFKTANRLLITGTPLQNNLHELWALLNFLLPDVFNSSEDFDEWFNTNTCLGDDALITR 331
Query: 426 LQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSAN 485
L +LKP +LRRLK +VEK + PK+E + V L+ +Q+ +Y +L ++ ++ G
Sbjct: 332 LHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDIDVVN-GAGKVE 390
Query: 486 VPNLMNTMMELRKCCIHPYLLNG 508
L N +M+LRKC HPYL +G
Sbjct: 391 KMRLQNILMQLRKCTNHPYLFDG 413
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 18/103 (17%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+ + SP Y +R YQ+ GLNW++ + NG N ILADEMGLGKT+Q+++ +
Sbjct: 115 RFDASPAYIKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISL-------L 167
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW 120
G K ++ GP +VI P ST+ NW EF+ W
Sbjct: 168 GYLKHFKNQA-----------GPHIVIVPKSTLQNWVNEFKKW 199
Score = 33.1 bits (74), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 161 GPFLVIAPLSTIPNWQREFEAW 182
GP +VI P ST+ NW EF+ W
Sbjct: 178 GPHIVIVPKSTLQNWVNEFKKW 199
>sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens
GN=CHD1L PE=1 SV=2
Length = 897
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 117/188 (62%), Gaps = 5/188 (2%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
+FHVL+TT+EI + D LK F W + ++DEAHRLKN++ L + L + +LL+GT
Sbjct: 145 RFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGT 204
Query: 384 PLQNNVNELFSLLNFLEPQQFSNNEA--FMSEFGQLKTESE-VNKLQLLLKPMMLRRLKE 440
P+QN++ EL+SLL+F+EP FS E F+ + ++ ESE ++L LL+P +LRR+K
Sbjct: 205 PIQNSLQELYSLLSFVEPDLFSKEEVGDFIQRYQDIEKESESASELHKLLQPFLLRRVKA 264
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
+V + K E V+ ++ +QKKYY+ IL ++ T A L N + +LRKC
Sbjct: 265 EVATELPKKTEVVIYHGMSALQKKYYKAILMKDLDAFENET--AKKVKLQNILSQLRKCV 322
Query: 501 IHPYLLNG 508
HPYL +G
Sbjct: 323 DHPYLFDG 330
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 28/119 (23%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR+YQLEG+NWL + CIL DEMGLGKT Q++ F+
Sbjct: 46 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIA------------------LFIY 87
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHATFVVLLQTGSKFFRICLE 148
+ GPFL++ PLS + NW+ E + + L+ + Y G K R CL+
Sbjct: 88 LAGRLNDEGPFLILCPLSVLSNWKEEMQRFAPGLSCVTY---------AGDKEERACLQ 137
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
GPFL++ PLS + NW+ E + + L+ + Y G +++
Sbjct: 96 GPFLILCPLSVLSNWKEEMQRFAPGLSCVTYAGDKEE 132
>sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus
GN=CHD1L PE=2 SV=1
Length = 897
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 117/188 (62%), Gaps = 5/188 (2%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGT 383
+FHVL+TT+EI + D LK F W + ++DEAHRLKN++ L + L + +LL+GT
Sbjct: 147 RFHVLLTTYEICLKDASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGT 206
Query: 384 PLQNNVNELFSLLNFLEPQQFSNN--EAFMSEFGQLKTESE-VNKLQLLLKPMMLRRLKE 440
P+QN++ EL+SLL+F+EP FS E F+ + ++ ESE ++L LL+P +LRR+K
Sbjct: 207 PIQNSLQELYSLLSFVEPDLFSKEQVEDFVQRYQDIEKESESASELYKLLQPFLLRRVKA 266
Query: 441 DVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCC 500
+V + K E V+ ++ +QKKYY+ IL ++ T A L N + +LRKC
Sbjct: 267 EVATELPRKTEVVIYHGMSALQKKYYKAILMKDLDAFENET--AKKVKLQNVLSQLRKCV 324
Query: 501 IHPYLLNG 508
HPYL +G
Sbjct: 325 DHPYLFDG 332
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 28/119 (23%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR YQL+G+NWL + CIL DEMGLGKT Q++ F+
Sbjct: 48 LRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIA------------------LFIY 89
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHATFVVLLQTGSKFFRICLE 148
+ GPFL++ PLS + NW+ E E + L+ + Y G K R CL+
Sbjct: 90 LAGRLNDEGPFLILCPLSVLSNWKEEMERFAPGLSCVTY---------AGDKDKRACLQ 139
Score = 37.0 bits (84), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKK 196
GPFL++ PLS + NW+ E E + L+ + Y G + K
Sbjct: 98 GPFLILCPLSVLSNWKEEMERFAPGLSCVTYAGDKDK 134
>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus
GN=Chd1l PE=2 SV=1
Length = 900
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 111/187 (59%), Gaps = 5/187 (2%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
FHVL+TT+EI + D LK F+W + +DEAHRLKN++ L L R+LL+GTP
Sbjct: 140 FHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTP 199
Query: 385 LQNNVNELFSLLNFLEPQQFSNN--EAFMSEFGQLKTESE-VNKLQLLLKPMMLRRLKED 441
+QN++ EL+SLL +EP F E F+ + ++ ES+ ++L LL+P +LRR+K
Sbjct: 200 IQNSLRELYSLLCVVEPDLFCREQVEDFVQRYQDIEKESKSASELHRLLQPFLLRRVKAQ 259
Query: 442 VEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMMELRKCCI 501
V + K E VV ++ +QKKYY+ IL ++ T A L N + +LRKC
Sbjct: 260 VATELPKKTEVVVYHGMSALQKKYYKAILMKDLDAFENET--AKKVKLQNILTQLRKCVD 317
Query: 502 HPYLLNG 508
HPYL +G
Sbjct: 318 HPYLFDG 324
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 67/142 (47%), Gaps = 42/142 (29%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
LR+YQLEG+NWL+ + CIL DEMGLGKT Q TI L ++
Sbjct: 40 LRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQ----------------TIALLIYL- 82
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVY----------------HATFV 133
V + GPFLV+ PLS + NW+ E E + L+ + Y + F
Sbjct: 83 -VGRLNDEGPFLVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQESGFH 141
Query: 134 VLLQTGSKFFRICLEFFVDAVF 155
VLL T + ICL+ DA F
Sbjct: 142 VLLTT----YEICLK---DASF 156
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSR 199
GPFLV+ PLS + NW+ E E + L+ + Y G +++ +R
Sbjct: 90 GPFLVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERAR 129
>sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana GN=DDM1
PE=1 SV=1
Length = 764
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 133/228 (58%), Gaps = 25/228 (10%)
Query: 307 LFFRNDKNQF--IKEKDLYK-----FHVLITTFEIIISDCLE-LKDFNWRLCIIDEAHRL 358
+ + DKNQ ++ K + K F ++IT++E+ ++D L+ + W+ +IDE HRL
Sbjct: 279 IIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKRILRHYPWKYVVIDEGHRL 338
Query: 359 KNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFMSEFG--- 415
KN CKLL L+ L +++++LL+GTPLQNN++EL+SLLNF+ P F++++ F S F
Sbjct: 339 KNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHDEFESWFDFSE 398
Query: 416 -----QLKTESE------VNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKK 464
K E E V+KL +L+P +LRR+K DVE S+ K+E ++ +T+ QKK
Sbjct: 399 KNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKK 458
Query: 465 YYRGILERNF-SFLSKGTTSAN--VPNLMNTMMELRKCCIHPYLLNGK 509
+ ++ + L + L N +++LRK C HP LL G+
Sbjct: 459 FQEHLVNNTLEAHLGENAIRGQGWKGKLNNLVIQLRKNCNHPDLLQGQ 506
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 20/101 (19%)
Query: 31 LRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFVD 90
L++YQL+G+ WL+ W NG N ILAD+M GLGKTIQ++ F+
Sbjct: 202 LKSYQLKGVKWLISLWQNGLNGILADQM-------------------GLGKTIQTIGFLS 242
Query: 91 AVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHA 130
+ G+ GP+LVIAPLST+ NW E +T +N I+YH
Sbjct: 243 HLKGNGLDGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHG 283
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 6/69 (8%)
Query: 150 FVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRKKLSRRDKERLRLK 208
F+ + G+ GP+LVIAPLST+ NW E +T +N I+YHG + + ++ LR K
Sbjct: 240 FLSHLKGNGLDGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQ-----RDELRRK 294
Query: 209 YVAADYVPK 217
++ PK
Sbjct: 295 HMPKTVGPK 303
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 113/198 (57%), Gaps = 16/198 (8%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLL-HLEHRVLLSGT 383
F+VL+TTFE II D L W IIDE HR+KN KL L H ++R++L+GT
Sbjct: 968 FNVLLTTFEYIIKDRPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGT 1027
Query: 384 PLQNNVNELFSLLNFLEPQQFSN--------NEAFMSEFGQLK---TESE----VNKLQL 428
PLQNN+ EL++LLNF+ P+ F++ N F + GQ K E E + +L
Sbjct: 1028 PLQNNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRLHK 1087
Query: 429 LLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPN 488
+L+P + RRLK+DVEK + K E V++ L+ +Q K Y+ + + F+ +
Sbjct: 1088 VLRPFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDGEKGKTGIKG 1147
Query: 489 LMNTMMELRKCCIHPYLL 506
L NT+M+L+K C HP++
Sbjct: 1148 LQNTVMQLKKICNHPFIF 1165
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 18/92 (19%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
TL+ YQL+GL W++ + N N ILADEMGLGKTIQ TI +T++
Sbjct: 868 TLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQ----------------TIAFITYL 911
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT 121
+ K +GPFL+I PLST+ NW EFE W
Sbjct: 912 --IEKKNQQGPFLIIVPLSTLTNWIMEFEKWA 941
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 146 CLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHG 192
+ F + K +GPFL+I PLST+ NW EFE W + I Y G
Sbjct: 904 TIAFITYLIEKKNQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKG 951
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 114/203 (56%), Gaps = 20/203 (9%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHL-EHRVLLSG 382
KF+VL+TT+E II D L W+ I+DE HR+KN +CKL + L ++ R+LL+G
Sbjct: 827 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTG 886
Query: 383 TPLQNNVNELFSLLNFLEP----------QQFSNNEAFMSEFGQLKTESE---VNKLQLL 429
TPLQN + EL++LLNFL P Q F+ A E L E + +L +
Sbjct: 887 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 946
Query: 430 LKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-----TSA 484
L+P +LRRLK++VE + K E V++ +++ +QK YR + + L+ G+
Sbjct: 947 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGI-LLTDGSEKDKKGKG 1005
Query: 485 NVPNLMNTMMELRKCCIHPYLLN 507
LMNT+M+LRK C HPY+
Sbjct: 1006 GAKTLMNTIMQLRKICNHPYMFQ 1028
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 62/115 (53%), Gaps = 19/115 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
++EK + TL+ YQL+GL W++ + N N ILADEMGLGKTIQ
Sbjct: 716 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQ------------ 763
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV-IVYHAT 131
TI +T++ + + GP+L+I PLST+ NW EF+ W V I Y T
Sbjct: 764 ----TIALITYL--MEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGT 812
Score = 39.3 bits (90), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNV-IVYHG----RRKKLSRRDKERLRLKYVAAD 213
+ GP+L+I PLST+ NW EF+ W V I Y G RR + + + + +
Sbjct: 777 LNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYE 836
Query: 214 YVPKDGEVL 222
Y+ KD +L
Sbjct: 837 YIIKDKHIL 845
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 114/203 (56%), Gaps = 20/203 (9%)
Query: 324 KFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHL-EHRVLLSG 382
KF+VL+TT+E II D L W+ I+DE HR+KN +CKL + L ++ R+LL+G
Sbjct: 822 KFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTG 881
Query: 383 TPLQNNVNELFSLLNFLEPQQFSNNEAFM----SEFGQLKTESEVN---------KLQLL 429
TPLQN + EL++LLNFL P F + F + F ++N +L +
Sbjct: 882 TPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKV 941
Query: 430 LKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT-----TSA 484
L+P +LRRLK++VE + K E V++ +++ +QK YR + + L+ G+
Sbjct: 942 LRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGI-LLTDGSEKDKKGKG 1000
Query: 485 NVPNLMNTMMELRKCCIHPYLLN 507
LMNT+M+LRK C HPY+
Sbjct: 1001 GAKTLMNTIMQLRKICNHPYMFQ 1023
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 62/115 (53%), Gaps = 19/115 (16%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
++EK + TL+ YQL+GL W++ + N N ILADEMGLGKTIQ
Sbjct: 711 RVEKQSALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQ------------ 758
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNV-IVYHAT 131
TI +T++ + + GP+L+I PLST+ NW EF+ W V I Y T
Sbjct: 759 ----TIALITYL--MEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGT 807
Score = 39.3 bits (90), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNV-IVYHG----RRKKLSRRDKERLRLKYVAAD 213
+ GP+L+I PLST+ NW EF+ W V I Y G RR + + + + +
Sbjct: 772 LNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYE 831
Query: 214 YVPKDGEVL 222
Y+ KD +L
Sbjct: 832 YIIKDKHIL 840
>sp|Q8RXS6|INO80_ARATH DNA helicase INO80 OS=Arabidopsis thaliana GN=INO80 PE=2 SV=2
Length = 1507
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 127/233 (54%), Gaps = 27/233 (11%)
Query: 302 LQEYELFFRNDKNQFIKEKDLYK----FHVLITTFEIIISDCLELKDFNWRLCIIDEAHR 357
LQE + +N I K +Y+ FH+LIT+++++++D + W+ ++DEA
Sbjct: 670 LQERTILRKN-----INPKRMYRRDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQA 724
Query: 358 LKNRNCKLLEGLRLLHLEHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAF------- 410
+K+ + + L + +R+LL+GTP+QNN+ EL++LL+F+ P F N++ F
Sbjct: 725 IKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSKG 784
Query: 411 ---MSEFGQLKTESEVNKLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYR 467
+E G E ++N+L +LKP MLRR+K+DV + K E V +L++ Q+ +Y+
Sbjct: 785 IENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQ 844
Query: 468 GI-----LERNFSFLSKGTTSANVPNLMNTMMELRKCCIHPYLL---NGKTYL 512
I L F T V NLMN +++LRK C HP L G +YL
Sbjct: 845 AIKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELFERNEGSSYL 897
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 53/100 (53%), Gaps = 19/100 (19%)
Query: 30 TLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTFV 89
TL+ YQ++GL WL+ + G N ILADEMGLGKTIQ++ LA+E
Sbjct: 585 TLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEE------------- 631
Query: 90 DAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVY 128
I GPFLV+AP S + NW E + DL + Y
Sbjct: 632 -----KNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPY 666
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 146 CLEFFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAW-TDLNVIVYHG 192
+ F + I GPFLV+AP S + NW E + DL + Y G
Sbjct: 621 AMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLPYWG 668
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 20/211 (9%)
Query: 316 FIKEKDLYKFHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHL- 374
F+ + KF+VL+TT+E II D L W+ I+DE HR+KN +CKL + L ++
Sbjct: 836 FVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA 895
Query: 375 EHRVLLSGTPLQNNVNELFSLLNFLEPQQFSNNEAFM----SEFGQLKTESEVN------ 424
R+LL+GTPLQN + EL++LLNFL P F + F + F + ++N
Sbjct: 896 PRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETIL 955
Query: 425 ---KLQLLLKPMMLRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGT 481
+L +L+P +LRRLK++VE + K E V++ +++ +Q+ YR + + L+ G+
Sbjct: 956 IIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGV-LLTDGS 1014
Query: 482 -----TSANVPNLMNTMMELRKCCIHPYLLN 507
LMNT+M+LRK C HPY+
Sbjct: 1015 EKDKKGKGGTKTLMNTIMQLRKICNHPYMFQ 1045
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 25/129 (19%)
Query: 18 KLEKSPVYKNDNTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEM 77
+++K + L+ YQ++GL WL+ + N N ILADEMGLGKTIQ
Sbjct: 733 RVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQ------------ 780
Query: 78 GLGKTIQSLTFVDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWTDLNVIVYHA------- 130
TI +T++ + I GPFL+I PLST+ NW EF+ W V V +
Sbjct: 781 ----TIALITYL--MEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARR 834
Query: 131 TFVVLLQTG 139
FV L++G
Sbjct: 835 AFVPQLRSG 843
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 159 IRGPFLVIAPLSTIPNWQREFEAWTDLNVIV-YHG 192
I GPFL+I PLST+ NW EF+ W V V Y G
Sbjct: 794 INGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKG 828
>sp|Q9NDJ2|DOM_DROME Helicase domino OS=Drosophila melanogaster GN=dom PE=1 SV=2
Length = 3198
Score = 123 bits (308), Expect = 4e-27, Method: Composition-based stats.
Identities = 64/195 (32%), Positives = 110/195 (56%), Gaps = 12/195 (6%)
Query: 325 FHVLITTFEIIISDCLELKDFNWRLCIIDEAHRLKNRNCKLLEGLRLLHLEHRVLLSGTP 384
FHV IT++++++ D + W+ I+DEA +KN + + L E R+LL+GTP
Sbjct: 1014 FHVCITSYKLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTP 1073
Query: 385 LQNNVNELFSLLNFLEPQQFSNNEAFMSEFGQLKT----------ESEVNKLQLLLKPMM 434
LQN++ EL+SL++FL P FS++ F F T E+ + +L +++P +
Sbjct: 1074 LQNDLMELWSLMHFLMPYVFSSHREFKEWFSNPMTGMIEGNMEYNETLITRLHKVIRPFL 1133
Query: 435 LRRLKEDVEKSIAPKEETVVEVELTNIQKKYYRGILERNFSFLSKGTTSANVPNLMNTMM 494
LRRLK++VEK + K E V+ L+N Q+ Y + R + + + N+ +++N +M
Sbjct: 1134 LRRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSR--AKTRETLQTGNLLSVINVLM 1191
Query: 495 ELRKCCIHPYLLNGK 509
+LRK C HP + +
Sbjct: 1192 QLRKVCNHPNMFEAR 1206
Score = 58.9 bits (141), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 19/104 (18%)
Query: 29 NTLRAYQLEGLNWLMFSWFNGRNCILADEMGLGKTIQSLTRNCILADEMGLGKTIQSLTF 88
++LR YQ GL+WL+ N ILADEMGLGKTIQ++ L + K
Sbjct: 912 HSLREYQHIGLDWLVTMNERKLNGILADEMGLGKTIQTIA----LLAHLACAK------- 960
Query: 89 VDAVFKTGIRGPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHAT 131
G GP L++ P S + NW+ EF+ W ++ Y+ +
Sbjct: 961 -------GNWGPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGS 997
Score = 37.0 bits (84), Expect = 0.42, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 161 GPFLVIAPLSTIPNWQREFEAWT-DLNVIVYHGRRK--KLSR 199
GP L++ P S + NW+ EF+ W ++ Y+G +K KL R
Sbjct: 964 GPHLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKERKLKR 1005
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 192,884,041
Number of Sequences: 539616
Number of extensions: 8344924
Number of successful extensions: 22718
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 159
Number of HSP's that attempted gapping in prelim test: 21001
Number of HSP's gapped (non-prelim): 1203
length of query: 513
length of database: 191,569,459
effective HSP length: 122
effective length of query: 391
effective length of database: 125,736,307
effective search space: 49162896037
effective search space used: 49162896037
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)