BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14715
(1147 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2FGE|A Chain A, Crystal Structure Of Presequence Protease Prep From
Arabidopsis Thaliana
pdb|2FGE|B Chain B, Crystal Structure Of Presequence Protease Prep From
Arabidopsis Thaliana
Length = 995
Score = 345 bits (886), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 289/1001 (28%), Positives = 458/1001 (45%), Gaps = 88/1001 (8%)
Query: 142 EEGAEVEGFLVKNVTPIPEFQMTAIKLQHVKTLAEYFHLSRDDSNNVFAVAFRTPPPDST 201
++ AE GF + I E + AI +H KT E +S +D N VF V FRTPP DST
Sbjct: 14 QDEAEKLGFEKVSEEFISECKSKAILFKHKKTGCEVXSVSNEDENKVFGVVFRTPPKDST 73
Query: 202 GITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNLM 261
GI HIL+H LCGS KYP ++PF+++L S+ TF+NA T PD T YP +S N D++NL+
Sbjct: 74 GIPHILQHSVLCGSRKYPVKEPFVELLKGSLHTFLNAFTYPDRTCYPVASTNTKDFYNLV 133
Query: 262 SIYLDAVFNPQL--KQLDFMQEGWRLEHEDIKDQNSPIIFKGVVFNEMKGAFSDNSYIFG 319
+YLDAVF P+ F QEGW H ++ D + I +KGVVFNE KG +S I G
Sbjct: 134 DVYLDAVFFPKCVDDAHTFQQEGW---HYELNDPSEDISYKGVVFNEXKGVYSQPDNILG 190
Query: 320 EALMNNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHLS 379
+ P Y SGGDP I NL +E +H+++YHP+N++ + YG+ + L
Sbjct: 191 RIAQQALSPENTYGVDSGGDPKDIPNLTFEEFKEFHRQYYHPSNARIWFYGDDDPVHRLR 250
Query: 380 FINTNYLSKINPYQHHRSSTAVLPEPAWDKPRQL---HIHGRHDPLASENQSHIAIAYKC 436
+ + YL SS + + +P +L + GR L ++ +
Sbjct: 251 VL-SEYLDXFEASPSPNSSKIKF-QKLFSEPVRLVEKYPAGRDGDLKKKHXLCVNWLLSE 308
Query: 437 AVMDNFKDVFVLNILGDLLLKGPNAPFYKNLVESGLGLSFSPVTGYEASIHDTLFTVGLQ 496
+D + L L L L P +P K L+ESGLG + +G + F +GL+
Sbjct: 309 KPLD-LQTQLALGFLDHLXLGTPASPLRKILLESGLGEALVS-SGLSDELLQPQFGIGLK 366
Query: 497 GVDSNKFDEIIGAVNKTIDEVIAEGFDKERVAIGLQGVDSNKFDEIKGAVNKTIDEVIAE 556
GV ++ + T+ ++ EGFD D ++ + N
Sbjct: 367 GVSEENVQKVEELIXDTLKKLAEEGFDN---------------DAVEASXN--------- 402
Query: 557 GFDKERVASVLHSLELSLKHQSSN---FGLNLLFWLVPFMNHDCDVIHLLHINDRLNWFK 613
++E SL+ ++ GL+L + +D D L + L K
Sbjct: 403 ------------TIEFSLRENNTGSFPRGLSLXLQSISKWIYDXDPFEPLKYTEPLKALK 450
Query: 614 KHIQE--NPTYLQEKVDEYLRNNPHKLIITMS--PEKTFDEKLDKVEKDILKDRISQMND 669
I E + +++ + NN H++ I PEK E+++ EK+IL+ + +
Sbjct: 451 TRIAEEGSKAVFSPLIEKLILNNSHRVTIEXQPDPEKATQEEVE--EKNILEKVKAAXTE 508
Query: 670 QDLNKVYVNGTELRKEQEK---EQNIDVLPTLKISDVDDHVERVVTTDKHILQVPIQLST 726
+DL ++ EL+ +QE + + +P+L + D+ V T I V +
Sbjct: 509 EDLAELARATEELKLKQETPDPPEALRCVPSLNLGDIPKEPTYVPTEVGDINGVKVLRHD 568
Query: 727 QPTNGVTYFRSVVDTSKLSPELKPLVPLFNYVINQMRTKNYDFREMDQLIHMSTGGISF- 785
TN + Y V D L EL PLVPLF + + TK+ F +++QLI TGGIS
Sbjct: 569 LFTNDIIYTEVVFDIGSLKHELLPLVPLFCQSLLEXGTKDLTFVQLNQLIGRKTGGISVY 628
Query: 786 ---NSHLG--ESCSTPNGFEEAILVSSHCLEHNNDKMFDVLSELFNNVQLTDLNRFTTLV 840
+S G E CS I+V D +F++ + L VQ TD RF V
Sbjct: 629 PLTSSVRGKDEPCS-------KIIVRGKSXAGRADDLFNLXNCLLQEVQFTDQQRFKQFV 681
Query: 841 NTLSSELINGISGNGHRYAMSIASSLVDPVSEQKEIYSGLSFVSKIKEIAQS--PKLENI 898
+ + N + G+GH A + + ++ E GLS++ + + + E I
Sbjct: 682 SQSRARXENRLRGSGHGIAAARXDAXLNIAGWXSEQXGGLSYLEFLHTLEKKVDEDWEGI 741
Query: 899 LQDIQSIGAHVLRKDSMRCALNMSAQ----SNAPERLESFLQSIPGDFTSQPGQTVHSFN 954
++ I +L ++ C +N +A +N + + FL +P + G V
Sbjct: 742 SSSLEEIRRSLLARNG--CIVNXTADGKSLTNVEKSVAKFLDLLP---ENPSGGLVTWDG 796
Query: 955 VSGIQKVSHVLPFPVNFTAKSLRGVPFLHKDYVALKVLSKFLTTKYLLREVREKNGAYGA 1014
++ + V+P VN+ K+ ++ + V+SK ++ +L VR GAYG
Sbjct: 797 RLPLRNEAIVIPTQVNYVGKAGNIYSTGYELDGSAYVISKHISNTWLWDRVRVSGGAYGG 856
Query: 1015 GA-VVSPSGVIQFYSYRDPYALETLATFDQSTQFLADTKLSVQDLDEAKLGVFKEVDAPI 1073
S SGV + SYRDP L+TL +D + FL + + L +A +G +VD+
Sbjct: 857 FCDFDSHSGVFSYLSYRDPNLLKTLDIYDGTGDFLRGLDVDQETLTKAIIGTIGDVDSYQ 916
Query: 1074 PPGSKGMS---KFLYGKTDEMIEQYRLSVKQVTEDDIRRVA 1111
P +KG S + L G TDE ++ R + + D + A
Sbjct: 917 LPDAKGYSSLLRHLLGVTDEERQRKREEILTTSLKDFKDFA 957
>pdb|3S5H|A Chain A, Crystal Structures Of Falcilysin, A M16 Metalloprotease From
The Malaria Parasite Plasmodium Falciparum
pdb|3S5I|A Chain A, Crystal Structures Of Falcilysin, A M16 Metalloprotease From
The Malaria Parasite Plasmodium Falciparum
pdb|3S5K|A Chain A, Crystal Structures Of Falcilysin, A M16 Metalloprotease From
The Malaria Parasite Plasmodium Falciparum
pdb|3S5M|A Chain A, Crystal Structures Of Falcilysin, A M16 Metalloprotease From
The Malaria Parasite Plasmodium Falciparum
Length = 1193
Score = 230 bits (586), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 263/1118 (23%), Positives = 468/1118 (41%), Gaps = 199/1118 (17%)
Query: 160 EFQMTAIKLQHVKTLAEYFHLSRDDSNNV---FAVAFRTPPPDSTGITHILEHLSLCGSV 216
EF+MT QH K + L +D +V FA +T GI HILEH L GS
Sbjct: 81 EFKMTYTVYQHKKAKTQVISLGTNDPLDVEQAFAFYVKTLTHSGKGIPHILEHSVLSGSK 140
Query: 217 KYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCDYFNLMSIYLDAVFNPQL--K 274
Y ++ + ++ T +NA T D T Y S N+ D+FN+M +Y+D+VF P +
Sbjct: 141 NYNYKNSIGLLEKGTLHTHLNAYTFNDRTVYMAGSMNNKDFFNIMGVYMDSVFQPNVLEN 200
Query: 275 QLDFMQEGWRLEHEDIKD-----------QNSPIIFKGVVFNEMKGAFSDNSYIFGEALM 323
+ F EGW E E +K+ ++ + F G+V+NEMKGA S M
Sbjct: 201 KYIFETEGWTYEVEKLKEDEKGKAEIPQMKDYKVSFNGIVYNEMKGALSSPLEDLYHEEM 260
Query: 324 NNILPTYCYKHVSGGDPIKILNLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHLSFINT 383
+ P + + SGGDP +I NL YE ++ K+Y+P K F + N + L+F++
Sbjct: 261 KYMFPDNVHSNNSGGDPKEITNLTYEEFKEFYYKNYNPKKVKVFFFSKNNPTELLNFVDQ 320
Query: 384 NYLSKINPYQHHRSSTAVLPEPAWDKPRQLHIHGRHDPLASENQSHIAIAYKC------- 436
YL +++ Y +R E K +I ++ + E ++ +++A+
Sbjct: 321 -YLGQLD-YSKYRDDAVESVEYQTYKKGPFYIKKKYGDHSEEKENLVSVAWLLNPKVDKT 378
Query: 437 --------------------------AVMDNFKDVFVLNILGDLLLKGPNAPFYKNLVES 470
++N D FVL I+ +LL+ P + YK L +
Sbjct: 379 NNHNNNHSNNQSSENNGYSNGSHSSDLSLENPTDYFVLLIINNLLIHTPESVLYKALTDC 438
Query: 471 GLGLSFSPVTGYEASIHDTLFTVGLQGVDSNKFDEIIGAVNKTIDEVIAEGFDKERVAIG 530
GLG + G S+ +F++GL+G+ N N+ I + FDK
Sbjct: 439 GLGNNVID-RGLNDSLVQYIFSIGLKGIKRN---------NEKI-----KNFDKVHY--- 480
Query: 531 LQGVDSNKFDEIKGAVNKTIDEVIAEGFDKERVASVLHSLELSLKHQS--SNFGLNLLFW 588
E++ + + +V+ EGF+K V + ++++E LK + ++ ++ +F
Sbjct: 481 ----------EVEDVIMNALKKVVKEGFNKSAVEASINNIEFILKEANLKTSKSIDFVFE 530
Query: 589 LVPFMNHDCDVIHLLHINDRLNWFKKHIQENPTYLQEKVDEYLRNNPHKLIITMSPEKTF 648
+ +N++ D + + LN K I+ P YL++ V+++ NN H+ +I + ++ +
Sbjct: 531 MTSKLNYNRDPLLIFEFEKYLNIVKNKIKNEPMYLEKFVEKHFINNAHRSVILLEGDENY 590
Query: 649 DEKLDKVEKDILKDRISQMNDQDLNKVYVNGTELRK---EQEKEQNIDVLPTLKISDVDD 705
++ + +EK LK RI N+Q+ +V N EL K +E ++++ P + ISD++
Sbjct: 591 AQEQENLEKQELKKRIENFNEQEKEQVIKNFEELSKYKNAEESPEHLNKFPIISISDLNK 650
Query: 706 HVERV---------------------VTTDKHILQ------------------------- 719
V + T++H+L+
Sbjct: 651 KTLEVPVNVYFTNINENNNIMETYNKLKTNEHMLKDNMDVFLKKYVLKNDKHNTNNNNNN 710
Query: 720 ----------------VPIQLSTQPTNGVTYFRSVVDTSKLSPELKPLVPLFNYVINQMR 763
VPI + PT G+ Y + V L+ + + LF +I + +
Sbjct: 711 NNNMDYSFTETKYEGNVPILVYEMPTTGIVYLQFVFSLDHLTVDELAYLNLFKTLILENK 770
Query: 764 TKNYDFREMDQLIHMSTGGISFNSHL---GESCSTPNGFEEAIL--VSSHCLEHNNDKMF 818
T + L + G +S N L + + + + L + H L H K
Sbjct: 771 TNKRSSEDFVILREKNIGSMSANVALYSKDDHLNVTDKYNAQALFNLEMHVLSH---KCN 827
Query: 819 DVLSELFNNVQLTDLNRFTTLVNTLSSELINGI----SGNGHRYAMSIASSLVDPVSEQK 874
D L+ V+ +D + +++ L + ING+ S G+ M + ++
Sbjct: 828 DALNIALEAVKESDFSNKKKVIDILKRK-INGMKTTFSEKGYAILMKYVKAHLNSKHYAH 886
Query: 875 EIYSGLSFVSKIKEIAQSPKLENILQDIQSIGAHVLRKDSMRCALNMSAQS--------- 925
I G K++E Q EN + +++I + K + L +S S
Sbjct: 887 NIIYGYENYLKLQE--QLELAENDFKTLENILVRIRNKIFNKKNLMVSVTSDYGALKHLF 944
Query: 926 -NAPERLESF-------------LQSIPGDFT----SQPGQTVHSFNVSGIQKVSHVLPF 967
N+ E L++ +Q+ D T ++ ++ F+ ++K VLP
Sbjct: 945 VNSNESLKNLVSYFEENDKYINDMQNKVNDPTVMGWNEEIKSKKLFDEEKVKKEFFVLPT 1004
Query: 968 PVNFTAKSLRGVPFLHKDYV--ALKVLSKFLTTKYLLREVREKNGAYGAGAVVSPSGVIQ 1025
VN + S+ G+ F +Y+ + V+ L YL VR NGAYG A + G +
Sbjct: 1005 FVN--SVSMSGILFKPGEYLDPSFTVIVAALKNSYLWDTVRGLNGAYGVFADIEYDGSVV 1062
Query: 1026 FYSYRDPYALETLATFDQSTQFL---ADTKLSVQDLDEAKLGVFKEVDAP---IPPGSKG 1079
F S RDP +TLATF +S + L ADT ++ DL + +D P I
Sbjct: 1063 FLSARDPNLEKTLATFRESAKGLRKMADT-MTENDLLRYIINTIGTIDKPRRGIELSKLS 1121
Query: 1080 MSKFLYGKTDEMIEQYRLSVKQVTEDDIRRVADTYLSR 1117
+ + ++++ ++R + ++D + AD S+
Sbjct: 1122 FLRLISNESEQDRVEFRKRIMNTKKEDFYKFADLLESK 1159
>pdb|3QZ2|A Chain A, The Structure Of Cysteine-Free Human Insulin Degrading
Enzyme
pdb|3QZ2|B Chain B, The Structure Of Cysteine-Free Human Insulin Degrading
Enzyme
pdb|4DTT|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme (ide)
In Complex With Compund 41367
pdb|4DTT|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme (ide)
In Complex With Compund 41367
Length = 990
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 197 PPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFS-SQNHC 255
PP+ G++H LEH+ G+ KYP + + + L+ + NA T ++T Y F S H
Sbjct: 71 PPNIAGLSHFLEHMLFLGTKKYPKENEYSQFLSEHAGS-SNAFTSGEHTNYYFDVSHEHL 129
Query: 256 D-------YFNLMSIYLDAVFNPQLKQLD------FMQEGWRL 285
+ F L ++ ++ + ++ +D M + WRL
Sbjct: 130 EGALDRFAQFFLSPLFDESAKDREVNAVDSEHEKNVMNDAWRL 172
>pdb|3HGZ|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|3HGZ|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
Length = 969
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 197 PPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFS-SQNHC 255
PP+ G++H L+H+ G+ KYP + + + L+ + NA T ++T Y F S H
Sbjct: 58 PPNIAGLSHFLQHMLFLGTKKYPKENEYSQFLSEHAGS-SNAFTSGEHTNYYFDVSHEHL 116
Query: 256 D-------YFNLMSIYLDAVFNPQLKQLD------FMQEGWRL 285
+ F L ++ ++ + ++ +D M + WRL
Sbjct: 117 EGALDRFAQFFLSPLFDESAKDREVNAVDSEHEKNVMNDAWRL 159
>pdb|2WBY|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Insulin
pdb|2WBY|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Insulin
pdb|2WC0|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Iodinated Insulin
pdb|2WC0|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Iodinated Insulin
pdb|3H44|A Chain A, Crystal Structure Of Insulin Degrading Enzyme In Complex
With Macrophage Inflammatory Protein 1 Alpha
pdb|3H44|B Chain B, Crystal Structure Of Insulin Degrading Enzyme In Complex
With Macrophage Inflammatory Protein 1 Alpha
pdb|3OFI|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Ubiquitin
pdb|3OFI|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Ubiquitin
pdb|3N56|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human B-Type Natriuretic Peptide (Bnp)
pdb|3N56|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human B-Type Natriuretic Peptide (Bnp)
pdb|3N57|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human Atrial Natriuretic Peptide (Anp)
pdb|3N57|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme (Ide)
In Complex With Human Atrial Natriuretic Peptide (Anp)
pdb|2YPU|A Chain A, Human Insulin Degrading Enzyme E111q In Complex With
Inhibitor Compound 41367
pdb|2YPU|B Chain B, Human Insulin Degrading Enzyme E111q In Complex With
Inhibitor Compound 41367
Length = 990
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 197 PPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFS-SQNHC 255
PP+ G++H L+H+ G+ KYP + + + L+ + NA T ++T Y F S H
Sbjct: 71 PPNIAGLSHFLQHMLFLGTKKYPKENEYSQFLSEHAGS-SNAFTSGEHTNYYFDVSHEHL 129
Query: 256 D-------YFNLMSIYLDAVFNPQLKQLD------FMQEGWRL 285
+ F L ++ ++ + ++ +D M + WRL
Sbjct: 130 EGALDRFAQFFLSPLFDESAKDREVNAVDSEHEKNVMNDAWRL 172
>pdb|3CWW|A Chain A, Crystal Structure Of Ide-Bradykinin Complex
pdb|3CWW|B Chain B, Crystal Structure Of Ide-Bradykinin Complex
Length = 990
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 197 PPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFS-SQNHC 255
PP+ G++H L+H+ G+ KYP + + + L+ + NA T ++T Y F S H
Sbjct: 71 PPNIAGLSHFLQHMLFLGTKKYPKENEYSQFLSEHAGS-SNAFTSGEHTNYYFDVSHEHL 129
Query: 256 D-------YFNLMSIYLDAVFNPQLKQLD------FMQEGWRL 285
+ F L ++ ++ + ++ +D M + WRL
Sbjct: 130 EGALDRFAQFFLSPLFDESAKDREVNAVDSEHEKNVMNDAWRL 172
>pdb|3E4Z|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Insulin-Like Growth Factor Ii
pdb|3E4Z|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Insulin-Like Growth Factor Ii
Length = 990
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 197 PPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFS-SQNHC 255
PP+ G++H L+H+ G+ KYP + + + L+ + NA T ++T Y F S H
Sbjct: 71 PPNIAGLSHFLQHMLFLGTKKYPKENEYSQFLSEHAGS-SNAFTSGEHTNYYFDVSHEHL 129
Query: 256 D-------YFNLMSIYLDAVFNPQLKQLD------FMQEGWRL 285
+ F L ++ ++ + ++ +D M + WRL
Sbjct: 130 EGALDRFAQFFLSPLFDESAKDREVNAVDSEHEKNVMNDAWRL 172
>pdb|3E4A|A Chain A, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution
pdb|3E4A|B Chain B, Human Ide-Inhibitor Complex At 2.6 Angstrom Resolution
pdb|2WK3|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-42)
pdb|2WK3|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-42)
Length = 1019
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 15/103 (14%)
Query: 197 PPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFS-SQNHC 255
PP+ G++H L+H+ G+ KYP + + + L+ + NA T ++T Y F S H
Sbjct: 100 PPNIAGLSHFLQHMLFLGTKKYPKENEYSQFLSEHAGS-SNAFTSGEHTNYYFDVSHEHL 158
Query: 256 D-------YFNLMSIYLDAVFNPQLKQLD------FMQEGWRL 285
+ F L ++ ++ + ++ +D M + WRL
Sbjct: 159 EGALDRFAQFFLSPLFDESAKDREVNAVDSEHEKNVMNDAWRL 201
>pdb|3HDI|A Chain A, Crystal Structure Of Bacillus Halodurans Metallo Peptidase
pdb|3HDI|B Chain B, Crystal Structure Of Bacillus Halodurans Metallo Peptidase
Length = 421
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 70/368 (19%), Positives = 146/368 (39%), Gaps = 52/368 (14%)
Query: 171 VKTLAEYFHLSRDDSNNVF-AVAFRTPPPDSTGITHILEHLSLCGSVKYPCRDPFMKMLT 229
V+ + E R S ++ R + GI+H LEH+ G+ ++ +
Sbjct: 11 VRIITEKMSTVRSVSIGIWVGTGSRYESAEENGISHFLEHMFFKGTNTRSAQE--IAEFF 68
Query: 230 RSMATFMNAMTGPDYT-FYPFSSQNHCDYFNLMSIYLDAVFNPQLKQLDFMQEGWRLEHE 288
S+ +NA T +YT +Y +H + D F+ ++ + +E
Sbjct: 69 DSIGGQVNAFTSKEYTCYYAKVLDDHAG--QAIDTLSDMFFHSTFQKEELEKE------- 119
Query: 289 DIKDQNSPIIFKGVVFNEMKGAFSDNSYIFGEALMNNILPTYCYKHVSGGDPI----KIL 344
+ VVF E+K D++ + +++++L + Y S G PI + L
Sbjct: 120 -----------RKVVFEEIK--MVDDT---PDDIVHDLLSSATYGKHSLGYPILGTVETL 163
Query: 345 NLKYENLVNYHKKHYHPTNSKFFSYGNFNLEDHLSFINTNYLSKINP--YQHHRSSTAVL 402
N E ++ ++ ++ + S N+ D L S++ P Y + L
Sbjct: 164 NSFNEGMLRHYMDRFYTGDYVVISVAG-NVHDELIDKIKETFSQVKPTTYNYQGEKPMFL 222
Query: 403 PEPAWDKPRQLHIHGRHDPLASENQSHIAIAYKCAVMDNFKDVFVLNILGDLLLKGPNAP 462
P K Q+H+ + Y + + KDV+ L +L ++L ++
Sbjct: 223 PNRIVRKKET-------------EQAHLCLGYPGLPIGD-KDVYALVLLNNVLGGSMSSR 268
Query: 463 FYKNLVESGLGLSFSPVTGYEASIHDTLFTVGLQGVDSNKFDEIIGAVNKTIDEVIAEGF 522
++++ E GL +S V Y +S D+ G ++ D+++ ++ +T + +G
Sbjct: 269 LFQDIREK-RGLCYS-VFSYHSSFRDSGMLTIYAGTGHDQLDDLVYSIQETTSALAEKGL 326
Query: 523 DKERVAIG 530
++ + G
Sbjct: 327 TEKELENG 334
>pdb|2JG4|A Chain A, Substrate-Free Ide Structure In Its Closed Conformation
pdb|2JG4|B Chain B, Substrate-Free Ide Structure In Its Closed Conformation
Length = 990
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 197 PPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFS-SQNHC 255
PP+ G++H EH+ G+ KYP + + + L+ + NA T ++T Y F S H
Sbjct: 71 PPNIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGS-SNAFTSGEHTNYYFDVSHEHL 129
Query: 256 D-------YFNLMSIYLDAVFNPQLKQLD------FMQEGWRL 285
+ F L ++ ++ + ++ +D M + WRL
Sbjct: 130 EGALDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWRL 172
>pdb|2G47|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-40)
pdb|2G47|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amyloid-Beta (1-40)
pdb|2G48|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|2G48|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Amylin
pdb|2G49|A Chain A, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Glucagon
pdb|2G49|B Chain B, Crystal Structure Of Human Insulin-Degrading Enzyme In
Complex With Glucagon
pdb|2G54|A Chain A, Crystal Structure Of Zn-Bound Human Insulin-Degrading
Enzyme In Complex With Insulin B Chain
pdb|2G54|B Chain B, Crystal Structure Of Zn-Bound Human Insulin-Degrading
Enzyme In Complex With Insulin B Chain
pdb|2G56|A Chain A, Crystal Structure Of Human Insulin-degrading Enzyme In
Complex With Insulin B Chain
pdb|2G56|B Chain B, Crystal Structure Of Human Insulin-degrading Enzyme In
Complex With Insulin B Chain
pdb|2JBU|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme
Complexed With Co-Purified Peptides.
pdb|2JBU|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme
Complexed With Co-Purified Peptides.
pdb|3E50|A Chain A, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Transforming Growth Factor-Alpha
pdb|3E50|B Chain B, Crystal Structure Of Human Insulin Degrading Enzyme In
Complex With Transforming Growth Factor-Alpha
Length = 990
Score = 36.6 bits (83), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 197 PPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFS-SQNHC 255
PP+ G++H +H+ G+ KYP + + + L+ + NA T ++T Y F S H
Sbjct: 71 PPNIAGLSHFCQHMLFLGTKKYPKENEYSQFLSEHAGS-SNAFTSGEHTNYYFDVSHEHL 129
Query: 256 D-------YFNLMSIYLDAVFNPQLKQLD------FMQEGWRL 285
+ F L ++ ++ + ++ +D M + WRL
Sbjct: 130 EGALDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWRL 172
>pdb|1Q2L|A Chain A, Crystal Structure Of Pitrilysin
Length = 939
Score = 36.6 bits (83), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 68/180 (37%), Gaps = 26/180 (14%)
Query: 197 PPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFSSQNHCD 256
P G+ H LEH+SL GS KYP D + L + NA T P T + +N
Sbjct: 57 PEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSH-NASTAPYRTAFYLEVENDA- 114
Query: 257 YFNLMSIYLDAVFNPQLKQLDFMQEGWRLEHEDIKDQNSPIIFKGVVFNEMKGAFSDNSY 316
+ DA+ P L + +E + V E+ A + +
Sbjct: 115 LPGAVDRLADAIAEPLLDKKYAERE------------------RNAVNAELTMARTRDGM 156
Query: 317 IFGEALMNNILPTYCYKHVSGGDPIKILNLKYEN-----LVNYHKKHYHPTNSKFFSYGN 371
+ I P + SGG+ ++ L+ K N L ++H+K+Y K Y N
Sbjct: 157 RMAQVSAETINPAHPGSKFSGGN-LETLSDKPGNPVQQALKDFHEKYYSANLMKAVIYSN 215
>pdb|3P7L|A Chain A, Rat Insulin Degrading Enzyme (Insulysin)
Length = 978
Score = 36.6 bits (83), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 197 PPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFS-SQNHC 255
PP+ G++H EH+ G+ KYP + + + L+ + NA T ++T Y F S H
Sbjct: 59 PPNIPGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGS-SNAFTSGEHTNYYFDVSHEHL 117
Query: 256 D--YFNLMSIYLDAVFNPQLK-----------QLDFMQEGWRL 285
+ +L +F+ K + + M + WRL
Sbjct: 118 EGALDRFAQFFLCPLFDASCKDREVNAVDSEHEKNVMNDAWRL 160
>pdb|3TUV|A Chain A, Crystal Structure Of Insulysin With Bound Atp
Length = 1019
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 197 PPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFS-SQNHC 255
PP+ G++H EH+ G+ KYP + + + L+ + NA T ++T Y F S H
Sbjct: 100 PPNIPGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGS-SNAFTSGEHTNYYFDVSHEHL 158
Query: 256 D--YFNLMSIYLDAVFNPQLK-----------QLDFMQEGWRL 285
+ +L +F+ K + + M + WRL
Sbjct: 159 EGALDRFAQFFLCPLFDASCKDREVNAVDSEHEKNVMNDAWRL 201
>pdb|3P7O|A Chain A, Rat Insulin Degrading Enzyme (Insulysin) E111f Mutant With
Two Bound Peptides
Length = 1019
Score = 33.1 bits (74), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 197 PPDSTGITHILEHLSLCGSVKYPCRDPFMKMLTRSMATFMNAMTGPDYTFYPFS-SQNHC 255
PP+ G++H H+ G+ KYP + + + L+ + NA T ++T Y F S H
Sbjct: 100 PPNIPGLSHFCFHMLFLGTKKYPKENEYSQFLSEHAGS-SNAFTSGEHTNYYFDVSHEHL 158
Query: 256 D--YFNLMSIYLDAVFNPQLK-----------QLDFMQEGWRL 285
+ +L +F+ K + + M + WRL
Sbjct: 159 EGALDRFAQFFLCPLFDASCKDREVNAVDSEHEKNVMNDAWRL 201
>pdb|2XGW|A Chain A, Zinc-Bound Crystal Structure Of Streptococcus Pyogenes Dpr
Length = 199
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 502 KFDEIIGAVNKTIDEVIAEGFDKERVAIGLQGV---------DSNKFDEIKGAVNKTIDE 552
K DE++ ++N +DEV ER+ I + G +K DE KG +KT+ +
Sbjct: 80 KMDELLDSLNANLDEV------SERL-ITIGGAPYSTLAEFSKHSKLDEAKGTYDKTVAQ 132
Query: 553 VIAEGFDKERVASVLHSLELSLKHQSSNFGLNLLF 587
+A + S L+ + L + + + G N LF
Sbjct: 133 HLARLVEVYLYLSSLYQVGLDITDEEGDAGTNDLF 167
>pdb|2JGQ|A Chain A, Kinetics And Structural Properties Of Triosephosphate
Isomerase From Helicobacter Pylori
pdb|2JGQ|B Chain B, Kinetics And Structural Properties Of Triosephosphate
Isomerase From Helicobacter Pylori
Length = 233
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 616 IQENPTYLQEKVDEYLRNNPHKLIITMSPEKTFDEKLDKVEKDILKDRISQMNDQDLN 673
++E+P++L+EK D + ++ K++ + E T EK K K+ L + Q+ + DLN
Sbjct: 96 LKESPSFLKEKFD-FFKSKNFKIVYCIGEELTTREKGFKAVKEFLSE---QLENIDLN 149
>pdb|2WLA|A Chain A, Streptococcus Pyogenes Dpr
pdb|2WLU|A Chain A, Iron-Bound Crystal Structure Of Streptococcus Pyogenes Dpr
Length = 175
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 502 KFDEIIGAVNKTIDEVIAEGFDKERVAIGLQGV---------DSNKFDEIKGAVNKTIDE 552
K DE++ ++N +DEV ER+ I + G +K DE KG +KT+ +
Sbjct: 64 KMDELLDSLNANLDEV------SERL-ITIGGAPYSTLAEFSKHSKLDEAKGTYDKTVAQ 116
Query: 553 VIAEGFDKERVASVLHSLELSLKHQSSNFGLNLLF 587
+A + S L+ + L + + + G N LF
Sbjct: 117 HLARLVEVYLYLSSLYQVGLDITDEEGDAGTNDLF 151
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,942,158
Number of Sequences: 62578
Number of extensions: 1508662
Number of successful extensions: 3858
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3820
Number of HSP's gapped (non-prelim): 38
length of query: 1147
length of database: 14,973,337
effective HSP length: 109
effective length of query: 1038
effective length of database: 8,152,335
effective search space: 8462123730
effective search space used: 8462123730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)