BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14717
(125 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 93.6 bits (231), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
L+VLHECN +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 117 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 174
Score = 87.4 bits (215), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 4 ISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLS 63
+S G + PMAIFELLDYIVNEPPPKLP+ +F+ F+DFV++CL KNP+ERADLK L
Sbjct: 299 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLM 358
Query: 64 ATTILKV--LHECNFA 77
+K E +FA
Sbjct: 359 VHAFIKRSDAEEVDFA 374
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 93.2 bits (230), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
L+VLHECN +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 82 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 139
Score = 89.4 bits (220), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 51/66 (77%), Gaps = 2/66 (3%)
Query: 14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKV--L 71
PMAIFELLDYIVNEPPPKLP+G+F+ F+DFV++CL KNP+ERADLK L +K
Sbjct: 274 PMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA 333
Query: 72 HECNFA 77
E +FA
Sbjct: 334 EEVDFA 339
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 93.2 bits (230), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
L+VLHECN +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 74 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 131
Score = 90.1 bits (222), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 55/75 (73%), Gaps = 7/75 (9%)
Query: 5 SGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSA 64
SGSGS MAIFELLDYIVNEPPPKLP+G+F+ F+DFV++CL KNP+ERADLK L
Sbjct: 224 SGSGS-----MAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 278
Query: 65 TTILKV--LHECNFA 77
+K E +FA
Sbjct: 279 HAFIKRSDAEEVDFA 293
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 93.2 bits (230), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
L+VLHECN +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 112
Score = 89.4 bits (220), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 51/66 (77%), Gaps = 2/66 (3%)
Query: 14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKV--L 71
PMAIFELLDYIVNEPPPKLP+G+F+ F+DFV++CL KNP+ERADLK L +K
Sbjct: 215 PMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDA 274
Query: 72 HECNFA 77
E +FA
Sbjct: 275 EEVDFA 280
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 92.8 bits (229), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
L+VLHECN +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 112
Score = 90.1 bits (222), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 4 ISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLS 63
+S G + PMAIFELLDYIVNEPPPKLP+G+F+ F+DFV++CL KNP+ERADLK L
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 64 ATTILKV--LHECNFA 77
+K E +FA
Sbjct: 297 VHAFIKRSDAEEVDFA 312
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 92.8 bits (229), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
L+VLHECN +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 58 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 115
Score = 87.8 bits (216), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 52/69 (75%), Gaps = 3/69 (4%)
Query: 12 PRP-MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKV 70
PRP MAIFELLDYIVNEPPPKLP+ +F+ F+DFV++CL KNP+ERADLK L +K
Sbjct: 205 PRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 264
Query: 71 --LHECNFA 77
E +FA
Sbjct: 265 SDAEEVDFA 273
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 92.8 bits (229), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
L+VLHECN +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 112
Score = 90.1 bits (222), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 4 ISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLS 63
+S G + PMAIFELLDYIVNEPPPKLP+G+F+ F+DFV++CL KNP+ERADLK L
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 64 ATTILKV--LHECNFA 77
+K E +FA
Sbjct: 297 VHAFIKRSDAEEVDFA 312
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 92.8 bits (229), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
L+VLHECN +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 112
Score = 90.1 bits (222), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 4 ISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLS 63
+S G + PMAIFELLDYIVNEPPPKLP+G+F+ F+DFV++CL KNP+ERADLK L
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 64 ATTILKV--LHECNFA 77
+K E +FA
Sbjct: 297 VHAFIKRSDAEEVDFA 312
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 92.8 bits (229), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
L+VLHECN +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 112
Score = 90.1 bits (222), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 4 ISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLS 63
+S G + PMAIFELLDYIVNEPPPKLP+G+F+ F+DFV++CL KNP+ERADLK L
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 64 ATTILKV--LHECNFA 77
+K E +FA
Sbjct: 297 VHAFIKRSDAEEVDFA 312
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 92.4 bits (228), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
Query: 4 ISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLS 63
+SG G + MAIFELLDYIVNEPPPKLP G+FT F++FV++CL KNP+ERADLK L+
Sbjct: 251 VSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLT 310
Query: 64 ATTILKV--LHECNFA 77
T +K + E +FA
Sbjct: 311 NHTFIKRSEVEEVDFA 326
Score = 88.6 bits (218), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 49/58 (84%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
L+VLHECN +IVGFYGAF SD +ISICME+MDGGSLD +LK+A +IPE ILG ++ A
Sbjct: 65 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA 122
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 18 FELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFA 77
F+ L +V EP P+LPA F+ F DF +CLKKN ER L LHE
Sbjct: 264 FQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF-TLHESKGT 322
Query: 78 HIVGFYGAFISD 89
+ F + D
Sbjct: 323 DVASFVKLILGD 334
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 73 ECNFAHIVGFYGAFISDQDISICMEYMDGGSLD----LILKKAGKIPEHILGTI 122
+C F V FYGA + D+ ICME MD SLD ++ K IPE ILG I
Sbjct: 108 DCPFT--VTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKI 158
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 18 FELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFA 77
F+ L +V EP P+LPA F+ F DF +CLKKN ER L LHE
Sbjct: 220 FQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF-TLHESKGT 278
Query: 78 HIVGFYGAFISD 89
+ F + D
Sbjct: 279 DVASFVKLILGD 290
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 73 ECNFAHIVGFYGAFISDQDISICMEYMDGGSLD----LILKKAGKIPEHILGTIT 123
+C F V FYGA + D+ ICME MD SLD ++ K IPE ILG I
Sbjct: 64 DCPFT--VTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIA 115
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 18 FELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFA 77
F+ L +V EP P+LPA F+ F DF +CLKKN ER L LHE
Sbjct: 247 FQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF-TLHESKGT 305
Query: 78 HIVGF 82
+ F
Sbjct: 306 DVASF 310
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 73 ECNFAHIVGFYGAFISDQDISICMEYMDGGSLD----LILKKAGKIPEHILGTI 122
+C F V FYGA + D+ IC E D SLD ++ K IPE ILG I
Sbjct: 91 DCPFT--VTFYGALFREGDVWICXELXD-TSLDKFYKQVIDKGQTIPEDILGKI 141
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 48 CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DL 106
+K+ P E +DL+ + + ++ +C+ H+V +YG++ + D+ I MEY GS+ D+
Sbjct: 58 AIKQVPVE-SDLQEIIKE--ISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDI 114
Query: 107 ILKKAGKIPEHILGTITSA 125
I + + E + TI +
Sbjct: 115 IRLRNKTLTEDEIATILQS 133
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 5/45 (11%)
Query: 25 VNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
N PP +++D+F DFV +CL K+P +RA +AT +L+
Sbjct: 239 TNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRA-----TATQLLQ 278
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 3 SISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
+ G +N+ P +F L+ ++ G F + F+ +R + + DL+
Sbjct: 10 QVPGMQNNIADPEELFTKLE--------RIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA 61
Query: 63 SATTI-----LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS-LDLILKKAGKIPE 116
+ VL +C+ +++ +YG+++ + I MEY+ GGS LDL+ +AG E
Sbjct: 62 EDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL--RAGPFDE 119
Query: 117 HILGTI 122
+ T+
Sbjct: 120 FQIATM 125
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
PM + L I PP L G FT SF++F+D CL K+PS R K L
Sbjct: 225 PMRVLFL---IPKNNPPTL-VGDFTKSFKEFIDACLNKDPSFRPTAKEL 269
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 49 LKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLIL 108
++++ ++ + + L ++ H+C + IV +G FI++ D+ I ME M + L
Sbjct: 58 MRRSGNKEENKRILMDLDVVLKSHDCPY--IVQCFGTFITNTDVFIAMELMGTCAEKLKK 115
Query: 109 KKAGKIPEHILGTITSA 125
+ G IPE ILG +T A
Sbjct: 116 RMQGPIPERILGKMTVA 132
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 18 FELLDYIVNEPPPKLPAGI-FTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
FE+L ++ E PP LP + F+ F+ FV CL K+ +R L + +K
Sbjct: 236 FEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIK 288
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGS-LDLILKKAGKIPEHILGTI 122
VL +C+ ++ +YG+++ D + I MEY+ GGS LDL+ + G + E + TI
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATI 124
Score = 28.5 bits (62), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
PM + L I PP L G ++ ++FV+ CL K PS R K L
Sbjct: 224 PMKVLFL---IPKNNPPTL-EGNYSKPLKEFVEACLNKEPSFRPTAKEL 268
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGS-LDLILKKAGKIPEHILGTI 122
VL +C+ ++ +YG+++ D + I MEY+ GGS LDL+ + G + E + TI
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATI 109
Score = 28.5 bits (62), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
PM + L I PP L G ++ ++FV+ CL K PS R K L
Sbjct: 209 PMKVLFL---IPKNNPPTL-EGNYSKPLKEFVEACLNKEPSFRPTAKEL 253
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGS-LDLILKKAGKIPEHILGTI 122
VL +C+ ++ +YG+++ D + I MEY+ GGS LDL+ + G + E + TI
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATI 109
Score = 28.5 bits (62), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
PM + L I PP L G ++ ++FV+ CL K PS R K L
Sbjct: 209 PMKVLFL---IPKNNPPTL-EGNYSKPLKEFVEACLNKEPSFRPTAKEL 253
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 31 KLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTI-----LKVLHECNFAHIVGFYGA 85
K+ G F + F+ +R K + DL+ + VL +C+ ++ +YG+
Sbjct: 34 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 93
Query: 86 FISDQDISICMEYMDGGS-LDLILKKAGKIPEHILGTI 122
++ D + I MEY+ GGS LDL+ + G + E + TI
Sbjct: 94 YLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATI 129
Score = 28.5 bits (62), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
PM + L I PP L G ++ ++FV+ CL K PS R K L
Sbjct: 228 HPMKVLFL---IPKNNPPTL-EGNYSKPLKEFVEACLNKEPSFRPTAKEL 273
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS-LDLILKKAGKIPEHILGTI 122
+ VL +C+ +I ++G+++ + I MEY+ GGS LDL+ K G + E + TI
Sbjct: 68 ITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATI 121
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
PM + L I PP L G + F++FV+ CL K+P R K L
Sbjct: 221 PMRVLFL---IPKNSPPTL-EGQHSKPFKEFVEACLNKDPRFRPTAKEL 265
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPE 116
+ V+++ + A+++ Y AF S DI + MEY+DGG L D I+ ++ + E
Sbjct: 137 ISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTE 186
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGK-----IPEHILGTITS 124
V+ + +IV FYGA + D ICME M S D K IPE ILG IT
Sbjct: 74 VMRSSDCPYIVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITL 132
Query: 125 A 125
A
Sbjct: 133 A 133
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 12 PRPMAIFELLDYIVNEPPPKLPAGI---FTDSFRDFVDRCLKKNPSERADLKTL 62
P+ ++F+ L +V PP+L F+ SF +FV+ CL K+ S+R K L
Sbjct: 230 PKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKEL 283
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSER 56
M L +I P L +G +++ FR+FVD CL+K P +R
Sbjct: 217 MNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 258
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSER 56
M L +I P L +G +++ FR+FVD CL+K P +R
Sbjct: 256 MNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 297
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 47 RCLKKN--PSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
+ LK+N PSE DL LS +LK + N H++ YGA D + + +EY GSL
Sbjct: 59 KMLKENASPSELRDL--LSEFNVLK---QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 105 DLILKKAGKI 114
L+++ K+
Sbjct: 114 RGFLRESRKV 123
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 47 RCLKKN--PSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
+ LK+N PSE DL LS +LK + N H++ YGA D + + +EY GSL
Sbjct: 59 KMLKENASPSELRDL--LSEFNVLK---QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 105 DLILKKAGKI 114
L+++ K+
Sbjct: 114 RGFLRESRKV 123
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 47 RCLKKN--PSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
+ LK+N PSE DL LS +LK + N H++ YGA D + + +EY GSL
Sbjct: 59 KMLKENASPSELRDL--LSEFNVLK---QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 105 DLILKKAGKI 114
L+++ K+
Sbjct: 114 RGFLRESRKV 123
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGK----IPEHIL 119
+L + N +++ +Y +FI D +++I +E D G L ++K K IPE +
Sbjct: 85 LLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTV 138
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHEC 74
M ++ L I P LP+ +++ R V+ C+ +P +R D+ + + K +H C
Sbjct: 241 MNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV--YDVAKRMHAC 298
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 79 IVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
IV YGA ++I ME ++GGSL ++K+ G +PE
Sbjct: 147 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE 184
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 79 IVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
IV YGA ++I ME ++GGSL ++K+ G +PE
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE 165
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 79 IVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
IV YGA ++I ME ++GGSL ++K+ G +PE
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE 165
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 79 IVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
IV YGA ++I ME ++GGSL ++K+ G +PE
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE 149
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 33.5 bits (75), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 79 IVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
IV YGA ++I ME ++GGSL ++K+ G +PE
Sbjct: 126 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE 163
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 33.1 bits (74), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 79 IVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIP 115
I+ +G F Q I + M+Y++GG L +L+K+ + P
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP 104
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 54 SERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAG 112
+ER + + L I+K L N IV F GA ++SI EY+ GSL +L K+G
Sbjct: 75 AERVN-EFLREVAIMKRLRHPN---IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSG 129
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 54 SERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAG 112
+ER + + L I+K L N IV F GA ++SI EY+ GSL +L K+G
Sbjct: 75 AERVN-EFLREVAIMKRLRHPN---IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSG 129
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTI 122
++ + +C+ +IV +Y +F+ ++ + M+ + GGS+ I+K EH G +
Sbjct: 59 IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL 113
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 11/51 (21%)
Query: 14 PMAIFELLDYIVNEPPPKLPAGI--------FTDSFRDFVDRCLKKNPSER 56
PM + L + PP L G+ + SFR + CL+K+P +R
Sbjct: 227 PMKVLML---TLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR 274
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 31/55 (56%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTI 122
++ + +C+ +IV +Y +F+ ++ + M+ + GGS+ I+K EH G +
Sbjct: 64 IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL 118
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 11/51 (21%)
Query: 14 PMAIFELLDYIVNEPPPKLPAGI--------FTDSFRDFVDRCLKKNPSER 56
PM + L + PP L G+ + SFR + CL+K+P +R
Sbjct: 232 PMKVLML---TLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR 279
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIP 115
L+ L N +IV YGA ++ + + MEY +GGSL +L A +P
Sbjct: 53 LRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLP 98
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLIL 108
+++L C+ +IV GA+ D + I +E+ GG++D I+
Sbjct: 59 IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM 99
Score = 28.9 bits (63), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSER 56
PM + LL ++PP L ++ FRDF+ L KNP R
Sbjct: 219 PMRV--LLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETR 259
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLIL 108
+++L C+ +IV GA+ D + I +E+ GG++D I+
Sbjct: 67 IEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM 107
Score = 28.9 bits (63), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSER 56
PM + LL ++PP L ++ FRDF+ L KNP R
Sbjct: 227 PMRV--LLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETR 267
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIP 115
L+ L N +IV YGA ++ + + MEY +GGSL +L A +P
Sbjct: 52 LRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLP 97
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEYM GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE 140
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 32.3 bits (72), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEYM GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE 140
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 26 NEPPPKLP-AGIFTDSFRDFVDRCLKKNPSERADLKTL 62
+ PPPKL + + RDF++R L ++P ERA + L
Sbjct: 255 DSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQEL 292
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 11/56 (19%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
++ + ++V Y +++ +++ + ME++ GG+L I+ + ++ E + T+ A
Sbjct: 95 IMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-RLNEEQIATVCEA 149
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 24 IVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
I P P+L + ++ F+ F++ CL KN S+R + L
Sbjct: 246 IPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQL 284
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSER 56
PM + LL +EPP ++ +F+DF+ +CL+KN R
Sbjct: 245 PMRV--LLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSER 56
PM + LL +EPP ++ +F+DF+ +CL+KN R
Sbjct: 245 PMRV--LLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSER 56
PM + LL +EPP ++ +F+DF+ +CL+KN R
Sbjct: 245 PMRV--LLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 80 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 127
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAE 140
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 141
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 161
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 133
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSER 56
PM + LL +EPP ++ +F+DF+ +CL+KN R
Sbjct: 219 PMRV--LLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDAR 259
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 79 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 126
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE 140
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 47 RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL 106
+ LK +E+ L +I+ N H+ G + + I EYM+ GSLD
Sbjct: 56 KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL---EGVVTKSKPVMIVTEYMENGSLDT 112
Query: 107 ILKK 110
LKK
Sbjct: 113 FLKK 116
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 37 FTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
F+ F FV++CL++NP R TL + K
Sbjct: 290 FSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 322
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 88 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 135
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 141
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 75 NFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEH 117
N +VG + F ++ + +EY++GG L +++ K+PE
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE 121
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 161
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE 140
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 114 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 161
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 30.4 bits (67), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 75 NFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
N +VG + F ++ + +EY++GG L +++ K+PE
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE 105
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE 140
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 86 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 133
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 75 NFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEH 117
N +VG + F ++ + +EY++GG L +++ K+PE
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE 153
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 141
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 75 NFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
N +VG + F ++ + +EY++GG L +++ K+PE
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPE 109
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 140
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 26/48 (54%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY+ GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE 140
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 52 NPSERADLKTLSATTI--------LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
N + R +KTL T+ +V+ + +V Y A +S++ I I EYM+ GS
Sbjct: 37 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMNKGS 95
Query: 104 -LDLILKKAGK 113
LD + + GK
Sbjct: 96 LLDFLKGETGK 106
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 52 NPSERADLKTLSATTI--------LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
N + R +KTL T+ +V+ + +V Y A +S++ I I EYM+ GS
Sbjct: 37 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMNKGS 95
Query: 104 -LDLILKKAGK 113
LD + + GK
Sbjct: 96 LLDFLKGETGK 106
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY GG + L++ G+ E
Sbjct: 94 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 141
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 140
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 30.0 bits (66), Expect = 0.37, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 37 FTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
F+ F FV++CL++NP R TL + K
Sbjct: 306 FSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 338
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAG 112
++L HIV FYG + + + EYM G L+ L+ G
Sbjct: 67 ELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHG 110
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 29.6 bits (65), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF +V +F + ++ + MEY GG + L++ G+ E
Sbjct: 93 RILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE 140
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 29.6 bits (65), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 52 NPSERADLKTLSATTI--------LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
N + R +KTL T+ +V+ + +V Y A +S++ I I EYM GS
Sbjct: 30 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIXIVTEYMSKGS 88
Query: 104 -LDLILKKAGK 113
LD + + GK
Sbjct: 89 LLDFLKGETGK 99
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 29.6 bits (65), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 78 HIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
HI+ Y + DI + MEY+ GG L + K G++ E
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDE 115
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 52 NPSERADLKTLSATTI--------LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
N + R +KTL T+ +V+ + +V Y A +S++ I I +EYM GS
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVIEYMSKGS 98
Query: 104 -LDLILKKAGK 113
LD + + GK
Sbjct: 99 LLDFLKGEMGK 109
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 52 NPSERADLKTLSATTI--------LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
N + R +KTL T+ +V+ + +V Y A +S++ I I +EYM GS
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVIEYMSKGS 98
Query: 104 -LDLILKKAGK 113
LD + + GK
Sbjct: 99 LLDFLKGEMGK 109
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 41 FRDFVDRCLKKNPSERADLKTLSATTILKV 70
FRDF++RCL+ + +R K L LK+
Sbjct: 247 FRDFLNRCLEMDVEKRGSAKELIQHQFLKI 276
Score = 28.5 bits (62), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
V+ E +IV + +++ ++ + MEY+ GGSL
Sbjct: 71 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 29.3 bits (64), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 41 FRDFVDRCLKKNPSERADLKTLSATTILKV 70
FRDF++RCL+ + +R K L LK+
Sbjct: 247 FRDFLNRCLEMDVEKRGSAKELIQHQFLKI 276
Score = 28.5 bits (62), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
V+ E +IV + +++ ++ + MEY+ GGSL
Sbjct: 71 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 41 FRDFVDRCLKKNPSERADLKTLSATTILKV 70
FRDF++RCL+ + +R K L LK+
Sbjct: 246 FRDFLNRCLEMDVEKRGSAKELLQHQFLKI 275
Score = 28.5 bits (62), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
V+ E +IV + +++ ++ + MEY+ GGSL
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 52 NPSERADLKTLSATTI--------LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
N + R +KTL T+ +V+ + +V Y A +S++ I I EYM GS
Sbjct: 33 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGS 91
Query: 104 -LDLILKKAGK 113
LD + + GK
Sbjct: 92 LLDFLKGETGK 102
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 28.9 bits (63), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 29/69 (42%)
Query: 44 FVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
F + LKK R T +L E IV AF + + + +EY+ GG
Sbjct: 48 FAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGE 107
Query: 104 LDLILKKAG 112
L + L++ G
Sbjct: 108 LFMQLEREG 116
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 28.9 bits (63), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 29/69 (42%)
Query: 44 FVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
F + LKK R T +L E IV AF + + + +EY+ GG
Sbjct: 48 FAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGE 107
Query: 104 LDLILKKAG 112
L + L++ G
Sbjct: 108 LFMQLEREG 116
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 28.9 bits (63), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 55 ERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
E+ L+ + A +L +H+V ++ A+ D + I EY +GGSL
Sbjct: 50 EQNALREVYAHAVL-----GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSL 94
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 28.9 bits (63), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 52 NPSERADLKTLSATTI--------LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
N + R +KTL T+ +V+ + +V Y A +S++ I I EYM GS
Sbjct: 29 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGS 87
Query: 104 -LDLILKKAGK 113
LD + + GK
Sbjct: 88 LLDFLKGEMGK 98
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 28.9 bits (63), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 47 RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL 106
+ LK +ER LS +I+ N I+ G + I EYM+ GSLD
Sbjct: 83 KALKAGYTERQRRDFLSEASIMGQFDHPN---IIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 107 ILK 109
L+
Sbjct: 140 FLR 142
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 55 ERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
E+ L+ + A +L +H+V ++ A+ D + I EY +GGSL
Sbjct: 54 EQNALREVYAHAVL-----GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSL 98
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 55 ERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
E+ L+ + A +L +H+V ++ A+ D + I EY +GGSL
Sbjct: 52 EQNALREVYAHAVL-----GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSL 96
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 55 ERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
E+ L+ + A +L +H+V ++ A+ D + I EY +GGSL
Sbjct: 52 EQNALREVYAHAVL-----GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSL 96
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 28.9 bits (63), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 47 RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL 106
+ LK +ER LS +I+ N I+ G + I EYM+ GSLD
Sbjct: 83 KALKAGYTERQRRDFLSEASIMGQFDHPN---IIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 107 ILK 109
L+
Sbjct: 140 FLR 142
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 52 NPSERADLKTLSATTI--------LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
N + R +KTL T+ +V+ + +V Y A +S++ I I EYM GS
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGS 98
Query: 104 -LDLILKKAGK 113
LD + + GK
Sbjct: 99 LLDFLKGEMGK 109
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 52 NPSERADLKTLSATTI--------LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
N + R +KTL T+ +V+ + +V Y A +S++ I I EYM GS
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGS 98
Query: 104 -LDLILKKAGK 113
LD + + GK
Sbjct: 99 LLDFLKGEMGK 109
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 52 NPSERADLKTLSATTI--------LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
N + R +KTL T+ +V+ + +V Y A +S++ I I EYM GS
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLY-AVVSEEPIYIVTEYMSKGS 98
Query: 104 -LDLILKKAGK 113
LD + + GK
Sbjct: 99 LLDFLKGEMGK 109
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 28.9 bits (63), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 52 NPSERADLKTLSATTI--------LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
N + R +KTL T+ +V+ + +V Y A +S++ I I EYM GS
Sbjct: 31 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGS 89
Query: 104 -LDLILKKAGK 113
LD + + GK
Sbjct: 90 LLDFLKGEMGK 100
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 28.5 bits (62), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 47 RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL 106
+ LK +++ LS +I+ N H+ G + + I EYM+ GSLD
Sbjct: 63 KTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL---EGVVTKCKPVMIITEYMENGSLDA 119
Query: 107 ILKK 110
L+K
Sbjct: 120 FLRK 123
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 28.5 bits (62), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
V+ E +IV + +++ ++ + MEY+ GGSL
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 41 FRDFVDRCLKKNPSERADLKTLSATTILKV 70
FRDF++RCL + +R K L LK+
Sbjct: 246 FRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 28.5 bits (62), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
V+ E +IV + +++ ++ + MEY+ GGSL
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Score = 28.5 bits (62), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 41 FRDFVDRCLKKNPSERADLKTLSATTILKV 70
FRDF++RCL + +R K L LK+
Sbjct: 246 FRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 51 KNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
K SE A +L +L HIV F+G + + + EYM G L+ L+
Sbjct: 57 KEASESARQDFQREAELLTMLQH---QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRS 113
Query: 111 AG 112
G
Sbjct: 114 HG 115
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF + +F + ++ + MEY GG + L++ G+ E
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 141
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 51 KNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
K SE A +L +L HIV F+G + + + EYM G L+ L+
Sbjct: 51 KEASESARQDFQREAELLTMLQH---QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRS 107
Query: 111 AG 112
G
Sbjct: 108 HG 109
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 52 NPSERADLKTLSATTI--------LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
N + R +KTL T+ +V+ + +V Y A +S++ I I EYM GS
Sbjct: 40 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVCEYMSKGS 98
Query: 104 -LDLILKKAGK 113
LD + + GK
Sbjct: 99 LLDFLKGEMGK 109
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF + +F + ++ + MEY GG + L++ G+ E
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE 141
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 52 NPSERADLKTLSATTI--------LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
N + R +KTL T+ +V+ + +V Y A +S++ I I EYM GS
Sbjct: 206 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGS 264
Query: 104 -LDLILKKAGK 113
LD + + GK
Sbjct: 265 LLDFLKGETGK 275
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 52 NPSERADLKTLSATTI--------LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
N + R +KTL T+ +V+ + +V Y A +S++ I I EYM GS
Sbjct: 206 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGS 264
Query: 104 -LDLILKKAGK 113
LD + + GK
Sbjct: 265 LLDFLKGETGK 275
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 31 KLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
K PA + T + +D + + L+ NPSER L +SA ++
Sbjct: 239 KFPASVPTGA-QDLISKLLRHNPSERLPLAQVSAHPWVR 276
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 52 NPSERADLKTLSATTI--------LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
N + R +KTL T+ +V+ + +V Y A +S++ I I EYM GS
Sbjct: 289 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGS 347
Query: 104 -LDLILKKAGK 113
LD + + GK
Sbjct: 348 LLDFLKGETGK 358
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 51 KNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
K SE A +L +L HIV F+G + + + EYM G L+ L+
Sbjct: 80 KEASESARQDFQREAELLTMLQH---QHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRS 136
Query: 111 AG 112
G
Sbjct: 137 HG 138
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 68 LKVLHECNFAHIVGFYGAFI--SDQDISICMEYMDGGSLDLILKKAGKIPEHI 118
+ +L E +IV +Y I ++ + I MEY +GG L ++ K K +++
Sbjct: 56 VNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 47 RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL 106
+ LK +++ LS +I+ N H+ G + + I EYM+ GSLD
Sbjct: 42 KTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL---EGVVTKCKPVMIITEYMENGSLDA 98
Query: 107 ILKK 110
L+K
Sbjct: 99 FLRK 102
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
++ + + +I+ G + + I EYM+ GSLD L+K
Sbjct: 97 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 137
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
++ + + +I+ G + + I EYM+ GSLD L+K
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
++ + + +I+ G + + I EYM+ GSLD L+K
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 47 RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL 106
+ LK +++ LS +I+ N H+ G + + I EYM+ GSLD
Sbjct: 48 KTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL---EGVVTKCKPVMIITEYMENGSLDA 104
Query: 107 ILKK 110
L+K
Sbjct: 105 FLRK 108
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
++ + + +I+ G + + I EYM+ GSLD L+K
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
++ + + +I+ G + + I EYM+ GSLD L+K
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
++ + + +I+ G + + I EYM+ GSLD L+K
Sbjct: 87 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 127
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
++ + + +I+ G + + I EYM+ GSLD L+K
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
++ + + +I+ G + + I EYM+ GSLD L+K
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
++ + + +I+ G + + I EYM+ GSLD L+K
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 139
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 68 LKVLHECNFAHIVGFYGAFI--SDQDISICMEYMDGGSLDLILKKAGKIPEHI 118
+ +L E +IV +Y I ++ + I MEY +GG L ++ K K +++
Sbjct: 56 VNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 69 KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
++L NF + +F + ++ + MEY GG + L++ G+ E
Sbjct: 94 RILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE 141
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
++ + + +I+ G + + I EYM+ GSLD L+K
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK 110
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 47 RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL 106
+ LK +ER + LS +I+ N I+ G + + I E+M+ G+LD
Sbjct: 50 KTLKGGYTERQRREFLSEASIMGQFEHPN---IIRLEGVVTNSMPVMILTEFMENGALDS 106
Query: 107 ILK 109
L+
Sbjct: 107 FLR 109
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 7/35 (20%), Positives = 22/35 (62%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
++ + ++V Y +++ ++ + ME+++GG+L
Sbjct: 79 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 113
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 68 LKVLHECNFAHIVGFYGAFI--SDQDISICMEYMDGGSLDLILKKAGKIPEHI 118
+ +L E +IV +Y I ++ + I MEY +GG L ++ K K +++
Sbjct: 56 VNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 7/35 (20%), Positives = 22/35 (62%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
++ + ++V Y +++ ++ + ME+++GG+L
Sbjct: 124 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 47 RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL 106
+ LK +ER + LS +I+ N I+ G + + I E+M+ G+LD
Sbjct: 48 KTLKGGYTERQRREFLSEASIMGQFEHPN---IIRLEGVVTNSMPVMILTEFMENGALDS 104
Query: 107 ILK 109
L+
Sbjct: 105 FLR 107
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 7/35 (20%), Positives = 22/35 (62%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
++ + ++V Y +++ ++ + ME+++GG+L
Sbjct: 81 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 115
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 235 TEGARDLISRLLKHNPSQRPXLREV 259
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 78 HIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
HI+ Y + D + MEY+ GG L + K G++ E
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE 110
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 7/35 (20%), Positives = 22/35 (62%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
++ + ++V Y +++ ++ + ME+++GG+L
Sbjct: 70 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 78 HIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
HI+ Y + D + MEY+ GG L + K G++ E
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEE 110
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILK 109
+KV+ +++ F G D+ ++ EY+ GG+L I+K
Sbjct: 58 VKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIK 99
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 27.7 bits (60), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 7/35 (20%), Positives = 22/35 (62%)
Query: 70 VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
++ + ++V Y +++ ++ + ME+++GG+L
Sbjct: 74 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 108
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 47 RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL 106
+ LK +E+ LS +I+ N H+ G + I E+M+ GSLD
Sbjct: 67 KTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL---EGVVTKSTPVMIITEFMENGSLDS 123
Query: 107 ILKK 110
L++
Sbjct: 124 FLRQ 127
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 234 TEGARDLISRLLKHNPSQRPMLREV 258
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREV 254
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREV 254
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 52 NPSERADLKTLSATTI--------LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
N + R +KTL T+ +V+ + +V Y A +S++ I I EYM GS
Sbjct: 206 NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVGEYMSKGS 264
Query: 104 -LDLILKKAGK 113
LD + + GK
Sbjct: 265 LLDFLKGETGK 275
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 227 TEGARDLISRLLKHNPSQRPMLREV 251
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 229 TEGARDLISRLLKHNPSQRPMLREV 253
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREV 257
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 256 TEGARDLISRLLKHNPSQRPMLREV 280
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREV 259
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 231 TEGARDLISRLLKHNPSQRPMLREV 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREV 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREV 257
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREV 254
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 47 RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL 106
+ LK +E+ L +I+ N H+ G + + I +E+M+ G+LD
Sbjct: 77 KTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL---EGVVTRGKPVMIVIEFMENGALDA 133
Query: 107 ILKK 110
L+K
Sbjct: 134 FLRK 137
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREV 259
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 47 RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL 106
+ LK +E+ LS +I+ N H+ G + I E+M+ GSLD
Sbjct: 41 KTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL---EGVVTKSTPVMIITEFMENGSLDS 97
Query: 107 ILKK 110
L++
Sbjct: 98 FLRQ 101
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 232 TEGARDLISRLLKHNPSQRPMLREV 256
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREV 259
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 256 TEGARDLISRLLKHNPSQRPMLREV 280
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 232 TEGARDLISRLLKHNPSQRPMLREV 256
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 231 TEGARDLISRLLKHNPSQRPMLREV 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 231 TEGARDLISRLLKHNPSQRPMLREV 255
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREV 254
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 38 TDSFRDFVDRCLKKNPSERADLKTL 62
T+ RD + R LK NPS+R L+ +
Sbjct: 247 TEGARDLISRLLKHNPSQRPMLREV 271
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/73 (19%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 50 KKNPSERADLKTLSATTIL----KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLD 105
K+ ++ DL+ +L ++ + + ++V Y +++ ++ + ME+++GG+L
Sbjct: 71 KQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALT 130
Query: 106 LILKKAGKIPEHI 118
I+ E I
Sbjct: 131 DIVTHTRMNEEQI 143
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 51 KNPS--ERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLIL 108
K+P+ R D + A + + HE HIV FYG + + EYM G L+ L
Sbjct: 54 KDPTLAARKDFQR-EAELLTNLQHE----HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 108
Query: 109 KKAG 112
+ G
Sbjct: 109 RAHG 112
>pdb|2E5S|A Chain A, Solution Structure Of The Zf-Ccchx2 Domain Of Muscleblind-
Like 2, Isoform 1 [homo Sapiens]
Length = 98
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 73 ECNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
+C FAH SD +++CM+Y+ G +
Sbjct: 37 DCRFAHPADSTMIDTSDNTVTVCMDYIKGRCM 68
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 78 HIVGFYGAFISDQDISICMEYMDGGSLDLILK 109
+IV + G+F + I I ME + GGSL +L+
Sbjct: 80 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLR 111
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 64 ATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGK 113
A T++K+ H +V FYG + I I EY+ G L L+ GK
Sbjct: 54 AQTMMKLSH----PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGK 99
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 13/89 (14%)
Query: 32 LPAGIFTDSF--------RDFVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFY 83
L +G F++ F + F +C+KK+P+ R + K+ HE +IV
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHE----NIVTLE 72
Query: 84 GAFISDQDISICMEYMDGGSL-DLILKKA 111
+ S + M+ + GG L D IL++
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRILERG 101
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 74 CNFAHIVGFYGAFISDQDISICMEYMDGGSL 104
N +V + AF D+ + + MEYM GG L
Sbjct: 132 ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDL 162
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 26.2 bits (56), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 78 HIVGFYGAFISDQDISICMEYMDGGSLDLILK 109
+IV + G+F + I I ME + GGSL +L+
Sbjct: 66 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLR 97
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 26.2 bits (56), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 44 FVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS 103
F+ R L K ++ + LK+L HI+ Y + DI + +EY G
Sbjct: 41 FISRQLLKKSD--MHMRVEREISYLKLLRH---PHIIKLYDVITTPTDIVMVIEYAGGEL 95
Query: 104 LDLILKK 110
D I++K
Sbjct: 96 FDYIVEK 102
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 25.8 bits (55), Expect = 6.0, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 75 NFAHIVGFYGAFISDQDISICMEYMDGGSL 104
N +V + AF D+ + + MEYM GG L
Sbjct: 132 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDL 161
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 25.8 bits (55), Expect = 6.0, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 75 NFAHIVGFYGAFISDQDISICMEYMDGGSL 104
N +V + AF D+ + + MEYM GG L
Sbjct: 127 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDL 156
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 25.8 bits (55), Expect = 6.0, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 75 NFAHIVGFYGAFISDQDISICMEYMDGGSL 104
N +V + AF D+ + + MEYM GG L
Sbjct: 132 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDL 161
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 44 FVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDI 92
F+ R + P++ D +T+ V + +V G F+SDQD+
Sbjct: 205 FLSRLKRTCPAKGTDRRTVLDVRTPNVFDNKYYIDLVNREGLFVSDQDL 253
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 63 SATTILKVLHECNFAHIVGFYGA-FISDQDISICMEYMDGGSLDLILKK 110
+A+ + K+ H+ H+V YG F D++I + E++ GSLD LKK
Sbjct: 62 AASMMSKLSHK----HLVLNYGVCFCGDENI-LVQEFVKFGSLDTYLKK 105
>pdb|2JYL|A Chain A, Solution Structure Of A Double Mutant Of The Carboxy-
Terminal Dimerization Domain Of The Hiv-1 Capsid
Protein
Length = 105
Score = 25.4 bits (54), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
Query: 11 VPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKV 70
VPR + +LD PK P FRD+VDR K +E+A + +A T +
Sbjct: 15 VPRGSHMTSILDI---RQGPKEP-------FRDYVDRFYKTLRAEQASQEVKNAATETLL 64
Query: 71 LHECN 75
+ N
Sbjct: 65 VQNAN 69
>pdb|2L6E|A Chain A, Nmr Structure Of The Monomeric Mutant C-Terminal Domain
Of Hiv-1 Capsid In Complex With Stapled Peptide
Inhibitor
Length = 105
Score = 25.4 bits (54), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
Query: 11 VPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKV 70
VPR + +LD PK P FRD+VDR K +E+A + +A T +
Sbjct: 15 VPRGSHMTSILDIRQG---PKEP-------FRDYVDRFYKTLRAEQASQEVKNAATETLL 64
Query: 71 LHECN 75
+ N
Sbjct: 65 VQNAN 69
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 25.4 bits (54), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
Query: 17 IFELLD-----YIVNEPPPKLPAGIFTDSFRDFV 45
+FE +D Y+ PPP LPA D R F+
Sbjct: 89 VFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 25.4 bits (54), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 63 SATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
+A+ + K+ H+ H+V YG + + + E++ GSLD LKK
Sbjct: 62 AASMMSKLSHK----HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKK 105
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 25.4 bits (54), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
Query: 17 IFELLD-----YIVNEPPPKLPAGIFTDSFRDFV 45
+FE +D Y+ PPP LPA D R F+
Sbjct: 89 VFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
Query: 17 IFELLD-----YIVNEPPPKLPAGIFTDSFRDFV 45
+FE +D Y+ PPP LPA D R F+
Sbjct: 97 VFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 130
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 25.0 bits (53), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
Query: 17 IFELLD-----YIVNEPPPKLPAGIFTDSFRDFV 45
+FE +D Y+ PPP LPA D R F+
Sbjct: 89 VFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.140 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,895,735
Number of Sequences: 62578
Number of extensions: 150710
Number of successful extensions: 768
Number of sequences better than 100.0: 228
Number of HSP's better than 100.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 502
Number of HSP's gapped (non-prelim): 302
length of query: 125
length of database: 14,973,337
effective HSP length: 86
effective length of query: 39
effective length of database: 9,591,629
effective search space: 374073531
effective search space used: 374073531
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)