BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14719
(160 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O01367|HOW_DROME Protein held out wings OS=Drosophila melanogaster GN=how PE=1 SV=1
Length = 405
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/106 (87%), Positives = 100/106 (94%)
Query: 1 MTAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELK 60
MTAKQLE ETGCKIMVRGKGSMRDKKKE+ANRGKPNWEHLS++LHVLI+VEDTENRA +K
Sbjct: 163 MTAKQLEQETGCKIMVRGKGSMRDKKKEDANRGKPNWEHLSDDLHVLITVEDTENRATVK 222
Query: 61 LARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLA 106
LA+AV EVQKLLVPQAEGEDELKKRQLMELAIINGTYRD AK +A
Sbjct: 223 LAQAVAEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDTTAKSVA 268
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 45/47 (95%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
E+ANRGKPNWEHLS++LHVLI+VEDTENRA +KLA+AV EVQKLLVP
Sbjct: 190 EDANRGKPNWEHLSDDLHVLITVEDTENRATVKLAQAVAEVQKLLVP 236
>sp|Q6P104|QKIB_DANRE Protein quaking-B OS=Danio rerio GN=qkib PE=2 SV=1
Length = 319
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 101/121 (83%), Gaps = 3/121 (2%)
Query: 1 MTAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELK 60
+TAKQLE ETGCKIMVRGKGSMRDKKKEE NRGKPNWEHL+E+LHVLI+VED++NRAE+K
Sbjct: 108 LTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIK 167
Query: 61 LARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAAVFVFSEEANRGK 120
L RAVEEV+KLLVP AEGED LKK QLMELAI+NGTYRD N K A A FS A
Sbjct: 168 LKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPALA---FSLAATAQA 224
Query: 121 P 121
P
Sbjct: 225 P 225
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 45/47 (95%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
EE NRGKPNWEHL+E+LHVLI+VED++NRAE+KL RAVEEV+KLLVP
Sbjct: 135 EEQNRGKPNWEHLNEDLHVLITVEDSQNRAEIKLKRAVEEVKKLLVP 181
>sp|Q32NN2|QKIA_XENLA Protein quaking-A OS=Xenopus laevis GN=qki-a PE=1 SV=2
Length = 341
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 100/121 (82%), Gaps = 3/121 (2%)
Query: 1 MTAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELK 60
+TAKQLE ETGCKIMVRGKGSMRDKKKEE NRGKPNWEHL+E+LHVLI+VED +NRAELK
Sbjct: 109 LTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAELK 168
Query: 61 LARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAAVFVFSEEANRGK 120
L RAVEEV+KLLVP AEGED LKK QLMELAI+NGTYRD N K A A FS A
Sbjct: 169 LKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDANLKSPALA---FSLAATGQA 225
Query: 121 P 121
P
Sbjct: 226 P 226
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 44/47 (93%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
EE NRGKPNWEHL+E+LHVLI+VED +NRAELKL RAVEEV+KLLVP
Sbjct: 136 EEQNRGKPNWEHLNEDLHVLITVEDAQNRAELKLKRAVEEVKKLLVP 182
>sp|Q91XU1|QKI_RAT Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2
Length = 341
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 88/108 (81%), Positives = 96/108 (88%)
Query: 1 MTAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELK 60
+TAKQLE ETGCKIMVRGKGSMRDKKKEE NRGKPNWEHL+E+LHVLI+VED +NRAE+K
Sbjct: 108 LTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIK 167
Query: 61 LARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAA 108
L RAVEEV+KLLVP AEGED LKK QLMELAI+NGTYRD N K A A
Sbjct: 168 LKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPALA 215
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 44/47 (93%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
EE NRGKPNWEHL+E+LHVLI+VED +NRAE+KL RAVEEV+KLLVP
Sbjct: 135 EEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVP 181
>sp|Q5W9D5|QKI_PIG Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1
Length = 341
Score = 182 bits (462), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/108 (81%), Positives = 96/108 (88%)
Query: 1 MTAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELK 60
+TAKQLE ETGCKIMVRGKGSMRDKKKEE NRGKPNWEHL+E+LHVLI+VED +NRAE+K
Sbjct: 108 LTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIK 167
Query: 61 LARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAA 108
L RAVEEV+KLLVP AEGED LKK QLMELAI+NGTYRD N K A A
Sbjct: 168 LKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPALA 215
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 44/47 (93%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
EE NRGKPNWEHL+E+LHVLI+VED +NRAE+KL RAVEEV+KLLVP
Sbjct: 135 EEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVP 181
>sp|Q9QYS9|QKI_MOUSE Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1
Length = 341
Score = 182 bits (462), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/108 (81%), Positives = 96/108 (88%)
Query: 1 MTAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELK 60
+TAKQLE ETGCKIMVRGKGSMRDKKKEE NRGKPNWEHL+E+LHVLI+VED +NRAE+K
Sbjct: 108 LTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIK 167
Query: 61 LARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAA 108
L RAVEEV+KLLVP AEGED LKK QLMELAI+NGTYRD N K A A
Sbjct: 168 LKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPALA 215
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 44/47 (93%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
EE NRGKPNWEHL+E+LHVLI+VED +NRAE+KL RAVEEV+KLLVP
Sbjct: 135 EEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVP 181
>sp|Q96PU8|QKI_HUMAN Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1
Length = 341
Score = 182 bits (462), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/108 (81%), Positives = 96/108 (88%)
Query: 1 MTAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELK 60
+TAKQLE ETGCKIMVRGKGSMRDKKKEE NRGKPNWEHL+E+LHVLI+VED +NRAE+K
Sbjct: 108 LTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIK 167
Query: 61 LARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAA 108
L RAVEEV+KLLVP AEGED LKK QLMELAI+NGTYRD N K A A
Sbjct: 168 LKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPALA 215
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 44/47 (93%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
EE NRGKPNWEHL+E+LHVLI+VED +NRAE+KL RAVEEV+KLLVP
Sbjct: 135 EEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVP 181
>sp|Q5W9D6|QKI_HORSE Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1
Length = 341
Score = 182 bits (462), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/108 (81%), Positives = 96/108 (88%)
Query: 1 MTAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELK 60
+TAKQLE ETGCKIMVRGKGSMRDKKKEE NRGKPNWEHL+E+LHVLI+VED +NRAE+K
Sbjct: 108 LTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIK 167
Query: 61 LARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAA 108
L RAVEEV+KLLVP AEGED LKK QLMELAI+NGTYRD N K A A
Sbjct: 168 LKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPALA 215
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 44/47 (93%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
EE NRGKPNWEHL+E+LHVLI+VED +NRAE+KL RAVEEV+KLLVP
Sbjct: 135 EEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVP 181
>sp|Q7JJZ8|QKI_FELCA Protein quaking OS=Felis catus GN=QKI PE=2 SV=1
Length = 341
Score = 182 bits (462), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/108 (81%), Positives = 96/108 (88%)
Query: 1 MTAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELK 60
+TAKQLE ETGCKIMVRGKGSMRDKKKEE NRGKPNWEHL+E+LHVLI+VED +NRAE+K
Sbjct: 108 LTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIK 167
Query: 61 LARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAA 108
L RAVEEV+KLLVP AEGED LKK QLMELAI+NGTYRD N K A A
Sbjct: 168 LKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPALA 215
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 44/47 (93%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
EE NRGKPNWEHL+E+LHVLI+VED +NRAE+KL RAVEEV+KLLVP
Sbjct: 135 EEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVP 181
>sp|Q9GMY1|QKI_CANFA Protein quaking OS=Canis familiaris GN=QKI PE=2 SV=1
Length = 341
Score = 182 bits (462), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/108 (81%), Positives = 96/108 (88%)
Query: 1 MTAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELK 60
+TAKQLE ETGCKIMVRGKGSMRDKKKEE NRGKPNWEHL+E+LHVLI+VED +NRAE+K
Sbjct: 108 LTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIK 167
Query: 61 LARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAA 108
L RAVEEV+KLLVP AEGED LKK QLMELAI+NGTYRD N K A A
Sbjct: 168 LKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPALA 215
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 44/47 (93%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
EE NRGKPNWEHL+E+LHVLI+VED +NRAE+KL RAVEEV+KLLVP
Sbjct: 135 EEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVP 181
>sp|Q5W9D7|QKI_BOVIN Protein quaking OS=Bos taurus GN=QKI PE=2 SV=1
Length = 341
Score = 182 bits (462), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 88/108 (81%), Positives = 96/108 (88%)
Query: 1 MTAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELK 60
+TAKQLE ETGCKIMVRGKGSMRDKKKEE NRGKPNWEHL+E+LHVLI+VED +NRAE+K
Sbjct: 108 LTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIK 167
Query: 61 LARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAA 108
L RAVEEV+KLLVP AEGED LKK QLMELAI+NGTYRD N K A A
Sbjct: 168 LKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKSPALA 215
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 44/47 (93%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
EE NRGKPNWEHL+E+LHVLI+VED +NRAE+KL RAVEEV+KLLVP
Sbjct: 135 EEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVP 181
>sp|Q6IRN2|QKIB_XENLA Protein quaking-B OS=Xenopus laevis GN=qki-b PE=1 SV=1
Length = 342
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 100/121 (82%), Gaps = 3/121 (2%)
Query: 1 MTAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELK 60
+TAKQLE ETGCKIMVRGKGSMRDKKKEE NRGKPNWEHL+E+LHVLI+VED +NRAE+K
Sbjct: 109 LTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIK 168
Query: 61 LARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAAVFVFSEEANRGK 120
L RAVEEV+KLLVP AEGED LKK QLMELAI+NGTYRD N K A A FS A
Sbjct: 169 LKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRDANLKSPALA---FSLAATAQA 225
Query: 121 P 121
P
Sbjct: 226 P 226
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 44/47 (93%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
EE NRGKPNWEHL+E+LHVLI+VED +NRAE+KL RAVEEV+KLLVP
Sbjct: 136 EEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVP 182
>sp|Q9YH18|QKI_CHICK Protein quaking OS=Gallus gallus GN=QKI PE=2 SV=2
Length = 340
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/121 (75%), Positives = 100/121 (82%), Gaps = 3/121 (2%)
Query: 1 MTAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELK 60
+TAKQLE ETGCKIMVRGKGSMRDKKKEE NRGKPNWEHL+E+LHVLI+VED +NRAE+K
Sbjct: 108 LTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIK 167
Query: 61 LARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAAVFVFSEEANRGK 120
L RAVEEV+KLL+P AEGED LKK QLMELAI+NGTYRD N K A A FS A
Sbjct: 168 LKRAVEEVKKLLIPAAEGEDSLKKMQLMELAILNGTYRDANIKSPALA---FSLAATAQA 224
Query: 121 P 121
P
Sbjct: 225 P 225
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 44/47 (93%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
EE NRGKPNWEHL+E+LHVLI+VED +NRAE+KL RAVEEV+KLL+P
Sbjct: 135 EEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLIP 181
>sp|Q6P0D0|QKIA_DANRE Protein quaking-A OS=Danio rerio GN=qkia PE=2 SV=2
Length = 341
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/113 (76%), Positives = 96/113 (84%), Gaps = 3/113 (2%)
Query: 1 MTAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELK 60
+TAKQLE ETGCKIMVRG+ SMRDKKKEE NRGKPNWEHL+E+LHVLI+VEDT+ RAE+K
Sbjct: 108 LTAKQLEAETGCKIMVRGRSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQTRAEIK 167
Query: 61 LARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAAVFVFS 113
+ RAVEEV+KLLVP AEGED LKK QLMELAI+NGTYRD N K A FS
Sbjct: 168 MRRAVEEVKKLLVPAAEGEDNLKKMQLMELAILNGTYRDTNIK---APTLAFS 217
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 44/47 (93%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
EE NRGKPNWEHL+E+LHVLI+VEDT+ RAE+K+ RAVEEV+KLLVP
Sbjct: 135 EEQNRGKPNWEHLNEDLHVLITVEDTQTRAEIKMRRAVEEVKKLLVP 181
>sp|Q17339|GLD1_CAEEL Female germline-specific tumor suppressor gld-1 OS=Caenorhabditis
elegans GN=gld-1 PE=1 SV=1
Length = 463
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 90/111 (81%), Gaps = 4/111 (3%)
Query: 1 MTAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELK 60
MTAKQLE +TGCKIMVRGKGSMRDK KE A+RGK NWEHL ++LHVL+ EDTENR +K
Sbjct: 231 MTAKQLEQDTGCKIMVRGKGSMRDKSKESAHRGKANWEHLEDDLHVLVQCEDTENRVHIK 290
Query: 61 LARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYR----DNNAKVLAA 107
L A+E+V+KLL+P EG DELK++QLMELAIINGTYR N A+V+ A
Sbjct: 291 LQAALEQVKKLLIPAPEGTDELKRKQLMELAIINGTYRPMKSPNPARVMTA 341
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 38/47 (80%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
E A+RGK NWEHL ++LHVL+ EDTENR +KL A+E+V+KLL+P
Sbjct: 258 ESAHRGKANWEHLEDDLHVLVQCEDTENRVHIKLQAALEQVKKLLIP 304
>sp|Q75GR5|SPIN1_ORYSJ KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica
GN=SPIN1 PE=1 SV=1
Length = 281
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 72/109 (66%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELKL 61
+ K++E TGC++ +RGKGS++D KE+ RGKP +EHLS+ LH+LI E + + +L
Sbjct: 161 SLKRVEASTGCRVFIRGKGSIKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARL 220
Query: 62 ARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAAVF 110
A E +++LL P E +D K++QL ELA++N T R+++ + + F
Sbjct: 221 RHAQEVIEELLKPVDESQDFYKRQQLRELAMLNSTLREDSPHPGSVSPF 269
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
E+ RGKP +EHLS+ LH+LI E + + +L A E +++LL P
Sbjct: 187 EDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKP 233
>sp|Q8GYR4|QKIL4_ARATH KH domain-containing protein At3g08620 OS=Arabidopsis thaliana
GN=At3g08620 PE=2 SV=1
Length = 283
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELKL 61
+ K++E TGC++ +RGKGS++D +KEE +GKP +EHL+E+LH+LI + + ++KL
Sbjct: 162 SLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKL 221
Query: 62 ARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAAVFVFSEEA 116
+A E +++L+ P E +D +K++QL ELA++N R+N+ + +V F+ A
Sbjct: 222 RQAQEIIEELVKPVDESQDYIKRQQLRELALLNSNLRENSPGP-SGSVSPFNSNA 275
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
EE +GKP +EHL+E+LH+LI + + ++KL +A E +++L+ P
Sbjct: 188 EEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKP 234
>sp|Q9FKT4|QKIL2_ARATH KH domain-containing protein At5g56140 OS=Arabidopsis thaliana
GN=At5g56140 PE=2 SV=1
Length = 315
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 66/101 (65%)
Query: 4 KQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELKLAR 63
K++E T C++++RG+GS++D KEE RGKP +EHL+E LH+L+ E + +L +
Sbjct: 195 KRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQ 254
Query: 64 AVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKV 104
A E + LL P E D KK+QL ELA++NGT R+ + +
Sbjct: 255 AREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEGSPM 295
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
EE RGKP +EHL+E LH+L+ E + +L +A E + LL P
Sbjct: 219 EEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTP 265
>sp|Q9ZVI3|QKIL3_ARATH KH domain-containing protein At2g38610 OS=Arabidopsis thaliana
GN=At2g38610 PE=1 SV=1
Length = 286
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 68/91 (74%)
Query: 4 KQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELKLAR 63
K++E TGC++ +RGKGS++D +KE+ RG+P +EHL+E+LH+LI + + E++L +
Sbjct: 165 KRVEATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQ 224
Query: 64 AVEEVQKLLVPQAEGEDELKKRQLMELAIIN 94
A E +++LL P E +D +K++QL ELA++N
Sbjct: 225 AQEIIEELLKPVDESQDFIKRQQLRELALLN 255
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
E+ RG+P +EHL+E+LH+LI + + E++L +A E +++LL P
Sbjct: 189 EDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKP 235
>sp|Q8GWR3|QKIL5_ARATH KH domain-containing protein At1g09660 OS=Arabidopsis thaliana
GN=At1g09660 PE=2 SV=1
Length = 298
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 63/98 (64%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELKL 61
+ K++EL T C++ +RG+GS++D KEE +GKP +EHL E LHVLI E E+ +L
Sbjct: 174 SLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRL 233
Query: 62 ARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRD 99
AV ++ LL P E D K+ QL ELA +NGT R+
Sbjct: 234 EHAVHFLESLLKPMDESMDHYKREQLKELAALNGTLRE 271
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
EE +GKP +EHL E LHVLI E E+ +L AV ++ LL P
Sbjct: 200 EEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKP 246
>sp|Q0WLR1|QKIL1_ARATH KH domain-containing protein At4g26480 OS=Arabidopsis thaliana
GN=At4g26480 PE=2 SV=1
Length = 308
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 67/103 (65%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELKL 61
+ K++E T C++++RG+GS++D KE+ RGKP +EHL+E LH+L+ E + +L
Sbjct: 187 SLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARL 246
Query: 62 ARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKV 104
+A E + LL P E D KK+QL ELA++NG+ R+ + +
Sbjct: 247 MQAREILDDLLTPVEETHDFYKKQQLRELALLNGSLREEGSPM 289
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 114 EEANRGKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
E+ RGKP +EHL+E LH+L+ E + +L +A E + LL P
Sbjct: 213 EDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTP 259
>sp|Q9WU01|KHDR2_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Mus musculus GN=Khdrbs2 PE=1 SV=1
Length = 349
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 4/95 (4%)
Query: 4 KQLELETGCKIMVRGKGSMRDKKKEEANR--GKPNWEHLSEELHVLISVEDTENRAELKL 61
K+L+ ETG K+ + GKGSMRDK KEE R G+ + HLS+ELHVLI V A ++
Sbjct: 89 KRLQEETGAKMSILGKGSMRDKTKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRM 148
Query: 62 ARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGT 96
+ A+EE++K LVP DE+++ QL EL+ +NG+
Sbjct: 149 SHALEEIKKFLVPDY--NDEIRQEQLRELSYLNGS 181
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 68 VQKLLVPQAEGEDELKKRQLMELAIIN-GTYRDNNAKVLAAAVFVFSEEANRGKPNWEHL 126
V KLL P+ L++ +++I+ G+ RD + E G+ + HL
Sbjct: 77 VGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKTKE---------EELRKSGEAKYAHL 127
Query: 127 SEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
S+ELHVLI V A +++ A+EE++K LVP
Sbjct: 128 SDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP 161
>sp|Q5VWX1|KHDR2_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Homo sapiens GN=KHDRBS2 PE=1 SV=1
Length = 349
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 4/95 (4%)
Query: 4 KQLELETGCKIMVRGKGSMRDKKKEEANR--GKPNWEHLSEELHVLISVEDTENRAELKL 61
K+L+ ETG K+ + GKGSMRDK KEE R G+ + HLS+ELHVLI V A ++
Sbjct: 89 KRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRM 148
Query: 62 ARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGT 96
+ A+EE++K LVP DE+++ QL EL+ +NG+
Sbjct: 149 SHALEEIKKFLVPDY--NDEIRQEQLRELSYLNGS 181
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 119 GKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
G+ + HLS+ELHVLI V A +++ A+EE++K LVP
Sbjct: 120 GEAKYAHLSDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP 161
>sp|Q920F3|KHDR2_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Rattus norvegicus GN=Khdrbs2 PE=1 SV=1
Length = 349
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 64/95 (67%), Gaps = 4/95 (4%)
Query: 4 KQLELETGCKIMVRGKGSMRDKKKEEANR--GKPNWEHLSEELHVLISVEDTENRAELKL 61
K+L+ ETG K+ + GKGSMRDK KEE R G+ + HLS+ELHVLI V A ++
Sbjct: 89 KRLQEETGAKMSILGKGSMRDKAKEEELRKSGEAKYAHLSDELHVLIEVFAPPGEAYSRM 148
Query: 62 ARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGT 96
+ A+EE++K LVP DE+++ QL EL+ +NG+
Sbjct: 149 SHALEEIKKFLVPDY--NDEIRQEQLRELSYLNGS 181
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 68 VQKLLVPQAEGEDELKKRQLMELAIIN-GTYRDNNAKVLAAAVFVFSEEANRGKPNWEHL 126
V KLL P+ L++ +++I+ G+ RD + E G+ + HL
Sbjct: 77 VGKLLGPRGNSLKRLQEETGAKMSILGKGSMRDKAKE---------EELRKSGEAKYAHL 127
Query: 127 SEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
S+ELHVLI V A +++ A+EE++K LVP
Sbjct: 128 SDELHVLIEVFAPPGEAYSRMSHALEEIKKFLVP 161
>sp|Q08BJ2|KHDR2_DANRE KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Danio rerio GN=khdrbs2 PE=2 SV=1
Length = 346
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANR--GKPNWEHLSEELHVLISVEDTENRAEL 59
+ K+L+ ETG K+ + GKGSMRDK KEE R G+ + HLS +LHVLI V A
Sbjct: 87 SMKRLQEETGAKMSILGKGSMRDKGKEEELRKSGEAKYAHLSNDLHVLIEVFAPPGEAYS 146
Query: 60 KLARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGT 96
+++ A+EE++K LVP DE+++ QL EL+ +NG+
Sbjct: 147 RMSHALEEIKKFLVPDY--NDEIRQEQLRELSYLNGS 181
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 68 VQKLLVPQAEGEDELKKRQLMELAIIN-GTYRDNNAKVLAAAVFVFSEEANRGKPNWEHL 126
V KLL P+ L++ +++I+ G+ RD + E G+ + HL
Sbjct: 77 VGKLLGPRGNSMKRLQEETGAKMSILGKGSMRDKGKE---------EELRKSGEAKYAHL 127
Query: 127 SEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
S +LHVLI V A +++ A+EE++K LVP
Sbjct: 128 SNDLHVLIEVFAPPGEAYSRMSHALEEIKKFLVP 161
>sp|Q91V33|KHDR1_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Rattus norvegicus GN=Khdrbs1 PE=1 SV=1
Length = 443
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANR--GKPNWEHLSEELHVLISVEDTENRAEL 59
T K+L+ ETG KI V GKGSMRDK KEE R G P + HL+ +LHV I V A
Sbjct: 183 TIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYA 242
Query: 60 KLARAVEEVQKLLVPQAEGEDELKKRQLMELAIING 95
+A A+EEV+K LVP D++ + Q +EL+ +NG
Sbjct: 243 LMAHAMEEVKKFLVPDM--MDDICQEQFLELSYLNG 276
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 119 GKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
G P + HL+ +LHV I V A +A A+EEV+K LVP
Sbjct: 216 GDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP 257
>sp|Q07666|KHDR1_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Homo sapiens GN=KHDRBS1 PE=1 SV=1
Length = 443
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANR--GKPNWEHLSEELHVLISVEDTENRAEL 59
T K+L+ ETG KI V GKGSMRDK KEE R G P + HL+ +LHV I V A
Sbjct: 183 TIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYA 242
Query: 60 KLARAVEEVQKLLVPQAEGEDELKKRQLMELAIING 95
+A A+EEV+K LVP D++ + Q +EL+ +NG
Sbjct: 243 LMAHAMEEVKKFLVPDM--MDDICQEQFLELSYLNG 276
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 119 GKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
G P + HL+ +LHV I V A +A A+EEV+K LVP
Sbjct: 216 GDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP 257
>sp|Q60749|KHDR1_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Mus musculus GN=Khdrbs1 PE=1 SV=2
Length = 443
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANR--GKPNWEHLSEELHVLISVEDTENRAEL 59
T K+L+ ETG KI V GKGSMRDK KEE R G P + HL+ +LHV I V A
Sbjct: 183 TIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYA 242
Query: 60 KLARAVEEVQKLLVPQAEGEDELKKRQLMELAIING 95
+A A+EEV+K LVP D++ + Q +EL+ +NG
Sbjct: 243 LMAHAMEEVKKFLVPDM--MDDICQEQFLELSYLNG 276
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 119 GKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
G P + HL+ +LHV I V A +A A+EEV+K LVP
Sbjct: 216 GDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP 257
>sp|Q8UUW7|KHDR1_CHICK KH domain-containing, RNA-binding, signal transduction-associated
protein 1 OS=Gallus gallus GN=KHDRBS1 PE=2 SV=1
Length = 433
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANR--GKPNWEHLSEELHVLISVEDTENRAEL 59
T K+L+ ETG KI V GKGSMRDK KEE R G P + HL+ +LHV I V A
Sbjct: 166 TIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDPKYAHLNMDLHVFIEVFGPPCEAYA 225
Query: 60 KLARAVEEVQKLLVPQAEGEDELKKRQLMELAIING 95
+A A+EEV+K LVP D++ + Q +EL+ +NG
Sbjct: 226 LMAHAMEEVKKFLVPDM--MDDICQEQFLELSYLNG 259
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 119 GKPNWEHLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
G P + HL+ +LHV I V A +A A+EEV+K LVP
Sbjct: 199 GDPKYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVP 240
>sp|Q0VFL3|KHDR2_XENTR KH domain-containing, RNA-binding, signal transduction-associated
protein 2 OS=Xenopus tropicalis GN=khdrbs2 PE=2 SV=1
Length = 345
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 4 KQLELETGCKIMVRGKGSMRDKKKEEANR--GKPNWEHLSEELHVLISVEDTENRAELKL 61
K+L+ ETG K+ + GKGSMRDK KEE R + HLS+ELHVL+ V A ++
Sbjct: 89 KRLQEETGAKMSILGKGSMRDKIKEEELRKSDEAKHAHLSDELHVLLEVFAPPGEAYSRM 148
Query: 62 ARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGT 96
+ A+EE++K LVP DE+++ QL EL+ +NG+
Sbjct: 149 SHALEEIKKFLVPDY--NDEIRQEQLRELSYLNGS 181
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 125 HLSEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
HLS+ELHVL+ V A +++ A+EE++K LVP
Sbjct: 126 HLSDELHVLLEVFAPPGEAYSRMSHALEEIKKFLVP 161
>sp|Q9R226|KHDR3_MOUSE KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Mus musculus GN=Khdrbs3 PE=1 SV=1
Length = 346
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 4 KQLELETGCKIMVRGKGSMRDKKKEEANR--GKPNWEHLSEELHVLISVEDTENRAELKL 61
K+L+ ET K+ + GKGSMRDK KEE R G+ + HL+++LHVLI V A ++
Sbjct: 85 KRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARM 144
Query: 62 ARAVEEVQKLLVPQAEGEDELKKRQLMELAIING 95
A+EE++K L+P DE+++ QL EL +NG
Sbjct: 145 GHALEEIKKFLIPDY--NDEIRQAQLQELTYLNG 176
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 68 VQKLLVPQAEGEDELKKRQLMELAIIN-GTYRDNNAKVLAAAVFVFSEEANRGKPNWEHL 126
V KLL P+ L++ L +++I+ G+ RD + E G+ + HL
Sbjct: 73 VGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKE---------EELRKSGEAKYFHL 123
Query: 127 SEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
+++LHVLI V A ++ A+EE++K L+P
Sbjct: 124 NDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP 157
>sp|O75525|KHDR3_HUMAN KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Homo sapiens GN=KHDRBS3 PE=1 SV=1
Length = 346
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 16/121 (13%)
Query: 4 KQLELETGCKIMVRGKGSMRDKKKEEANR--GKPNWEHLSEELHVLISVEDTENRAELKL 61
K+L+ ET K+ + GKGSMRDK KEE R G+ + HL+++LHVLI V A ++
Sbjct: 85 KRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARM 144
Query: 62 ARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAAVFVFSEEANRGKP 121
A+EE++K L+P DE+++ QL EL +NG + + V+ RGKP
Sbjct: 145 GHALEEIKKFLIPDY--NDEIRQAQLQELTYLNGGSENADVPVV------------RGKP 190
Query: 122 N 122
Sbjct: 191 T 191
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 68 VQKLLVPQAEGEDELKKRQLMELAIIN-GTYRDNNAKVLAAAVFVFSEEANRGKPNWEHL 126
V KLL P+ L++ L +++I+ G+ RD + E G+ + HL
Sbjct: 73 VGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKE---------EELRKSGEAKYFHL 123
Query: 127 SEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
+++LHVLI V A ++ A+EE++K L+P
Sbjct: 124 NDDLHVLIEVFAPPAEAYARMGHALEEIKKFLIP 157
>sp|Q9JLP1|KHDR3_RAT KH domain-containing, RNA-binding, signal transduction-associated
protein 3 OS=Rattus norvegicus GN=Khdrbs3 PE=1 SV=1
Length = 346
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 4 KQLELETGCKIMVRGKGSMRDKKKEEANR--GKPNWEHLSEELHVLISVEDTENRAELKL 61
K+L+ ET K+ + GKGSMRDK KEE R G+ + HL+++LHVLI V A ++
Sbjct: 85 KRLQEETLTKMSILGKGSMRDKAKEEELRKSGEAKYFHLNDDLHVLIEVFAPPAEAYARM 144
Query: 62 ARAVEEVQKLLVPQAEGEDELKKRQLMELAIING 95
A+E+++K L+P DE+++ QL EL +NG
Sbjct: 145 GHALEDIKKFLIPDY--NDEIRQAQLQELTYLNG 176
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 68 VQKLLVPQAEGEDELKKRQLMELAIIN-GTYRDNNAKVLAAAVFVFSEEANRGKPNWEHL 126
V KLL P+ L++ L +++I+ G+ RD + E G+ + HL
Sbjct: 73 VGKLLGPRGNSLKRLQEETLTKMSILGKGSMRDKAKE---------EELRKSGEAKYFHL 123
Query: 127 SEELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
+++LHVLI V A ++ A+E+++K L+P
Sbjct: 124 NDDLHVLIEVFAPPAEAYARMGHALEDIKKFLIP 157
>sp|Q750X2|BBP_ASHGO Branchpoint-bridging protein OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=BBP PE=3 SV=2
Length = 507
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/101 (40%), Positives = 67/101 (66%), Gaps = 6/101 (5%)
Query: 2 TAKQLELETGCKIMVRGKGSMRD-KKKEEANRGKPNWEHLSEELHVLISVEDTENRAELK 60
T KQL+ ++GCKI++RG+GS+++ K + +G N ++E LH +IS DTE + L
Sbjct: 176 TLKQLQQQSGCKIVIRGRGSVKEGKAATDLPKGAMN---MNEPLHCVISA-DTEEKIPLG 231
Query: 61 LARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNN 101
+ AVE + + EG+++LK+ QL ELA++NGT R++N
Sbjct: 232 I-NAVESIIIKAITSPEGQNDLKRGQLRELAVLNGTLREDN 271
>sp|Q6C187|BBP_YARLI Branchpoint-bridging protein OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=BBP PE=3 SV=1
Length = 605
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 11/102 (10%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELKL 61
T K++E E+G KI +RG+GS++ K P ++LH LI ED E K+
Sbjct: 206 TLKKMEQESGAKICIRGRGSVKQGK---GRTDIPFQSTAEDDLHCLIISEDEE-----KI 257
Query: 62 ARAVEEVQKLLVPQA---EGEDELKKRQLMELAIINGTYRDN 100
ARAV+ VQ+++ A EG++ELK+ QL ELA +NGT RD+
Sbjct: 258 ARAVQLVQQVIDTAASVPEGQNELKRSQLRELAALNGTLRDD 299
>sp|Q4WXV6|BBP_ASPFU Branchpoint-bridging protein OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=bbp PE=3
SV=1
Length = 566
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELKL 61
T K++E E+G KI +RGKGS+++ K N E E+LH LI + DTE + K
Sbjct: 208 TLKKMEAESGAKIAIRGKGSVKEGKGRSDAAHASNQE---EDLHCLI-MADTEEKVN-KA 262
Query: 62 ARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDN 100
+ V V + EG++ELK+ QL ELA +NGT RD+
Sbjct: 263 KKLVHNVIETAASIPEGQNELKRNQLRELAALNGTLRDD 301
>sp|Q54BM5|BBP_DICDI Branchpoint-bridging protein OS=Dictyostelium discoideum GN=sf1
PE=3 SV=1
Length = 501
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 15/103 (14%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSE--ELHVLISVEDTENRAEL 59
T K++E E+G KI +RGKGS RD GKP E ELHVL++ + +
Sbjct: 206 TQKRMEKESGAKIAIRGKGSSRD--------GKPTKLQFQENDELHVLLTADTVD----- 252
Query: 60 KLARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNA 102
+L +A V++ L+P EG++E K++QL ELA +NGT R+ A
Sbjct: 253 QLDKAEVLVREFLIPVEEGKNEHKRQQLRELAEMNGTLRERPA 295
>sp|Q8NIW7|BBP_NEUCR Branchpoint-bridging protein OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=bpb-1 PE=3 SV=1
Length = 607
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELKL 61
T K++E E+G KI +RGKGS+++ K N E E+LH LI + DTE + K
Sbjct: 223 TLKKMETESGAKIAIRGKGSVKEGKGRSDAAHSSNQE---EDLHCLI-MADTEEKVN-KA 277
Query: 62 ARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDN 100
+ + + + EG++ELK+ QL ELA +NGT RD+
Sbjct: 278 KKLIHNIIETAASIPEGQNELKRNQLRELAALNGTLRDD 316
>sp|O74555|BBP_SCHPO Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=bpb1 PE=1 SV=1
Length = 587
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELKL 61
T K +E ++G KI +RGKGS+++ K + N E E+LH L++ D+E++ +
Sbjct: 213 TLKDMEAKSGAKIAIRGKGSVKEGKGRSDPSVRGNME---EDLHCLVTA-DSEDKINHAI 268
Query: 62 ARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKV 104
+ ++ V + EG+++LK+ QL +LA +NGT RD+ +V
Sbjct: 269 -KLIDNVIQTAASVPEGQNDLKRNQLRQLATLNGTLRDDENQV 310
>sp|Q64213|SF01_MOUSE Splicing factor 1 OS=Mus musculus GN=Sf1 PE=1 SV=6
Length = 653
Score = 59.7 bits (143), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 16/110 (14%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHL---SEELHVLISVEDTENRAE 58
T K +E E KIM+RGKGS++ E G+ + + L E LH L++ EN
Sbjct: 163 TLKNIEKECNAKIMIRGKGSVK-----EGKVGRKDGQMLPGEDEPLHALVTANTMEN--- 214
Query: 59 LKLARAVEEVQKLL---VPQAEGEDELKKRQLMELAIINGTYRDNNAKVL 105
+ +AVE+++ +L + E +++L+K QL ELA +NGT R+++ ++L
Sbjct: 215 --VKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRIL 262
>sp|Q6FW77|BBP_CANGA Branchpoint-bridging protein OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=BBP
PE=3 SV=1
Length = 465
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELKL 61
T ++++ ++GCKI +RG+GS+++ K ++ P S+ LH LI + D E + E +
Sbjct: 161 TLRKMQEDSGCKIAIRGRGSVKEGKT--SSDLPPGAMDFSDPLHCLI-IADNEEKIENGI 217
Query: 62 ARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKVLAAA 108
+A + V EG++ELK+ QL ELA +NGT R++N
Sbjct: 218 -KACRNIVIKAVTSPEGQNELKRGQLRELAELNGTLREDNRPCATCG 263
>sp|Q15637|SF01_HUMAN Splicing factor 1 OS=Homo sapiens GN=SF1 PE=1 SV=4
Length = 639
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 16/110 (14%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHL---SEELHVLISVEDTENRAE 58
T K +E E KIM+RGKGS++ E G+ + + L E LH L++ EN
Sbjct: 163 TLKNIEKECNAKIMIRGKGSVK-----EGKVGRKDGQMLPGEDEPLHALVTANTMEN--- 214
Query: 59 LKLARAVEEVQKLL---VPQAEGEDELKKRQLMELAIINGTYRDNNAKVL 105
+ +AVE+++ +L + E +++L+K QL ELA +NGT R+++ ++L
Sbjct: 215 --VKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRIL 262
>sp|Q5AED9|BBP_CANAL Branchpoint-bridging protein OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=BBP PE=3 SV=1
Length = 455
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 63/101 (62%), Gaps = 8/101 (7%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELKL 61
T K+L+ ++G ++ +RGKGS+++ K + + ++LHVLI+ + + LK+
Sbjct: 175 TLKKLQEDSGARLQIRGKGSVKEGKSSDGFGSSQTGTDIQDDLHVLITAD-----SPLKI 229
Query: 62 ARAVEEVQKL---LVPQAEGEDELKKRQLMELAIINGTYRD 99
++AV+ V ++ L+ +G + +K+ QL ELA++NGT R+
Sbjct: 230 SKAVKLVNEIIDKLIFSPQGMNFMKRDQLKELAVLNGTLRE 270
>sp|Q12186|BBP_YEAST Branchpoint-bridging protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MSL5 PE=1 SV=1
Length = 476
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 64/103 (62%), Gaps = 10/103 (9%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELKL 61
T ++L+ ++ CKI +RG+GS+++ K A+ P + + LH LI + D+E+ K+
Sbjct: 175 TLRKLQEDSNCKIAIRGRGSVKEGK--NASDLPPGAMNFEDPLHCLI-IADSED----KI 227
Query: 62 ARAVEEVQKLL---VPQAEGEDELKKRQLMELAIINGTYRDNN 101
+ ++ Q ++ V EG+++LK+ QL ELA +NGT R++N
Sbjct: 228 QKGIKVCQNIVIKAVTSPEGQNDLKRGQLRELAELNGTLREDN 270
>sp|Q4P0H7|BBP_USTMA Branchpoint-bridging protein OS=Ustilago maydis (strain 521 / FGSC
9021) GN=BBP PE=3 SV=1
Length = 625
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 8/103 (7%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELKL 61
T K +E ++G KI +RGKGS++ K GK + + EE+H +++ +D + K
Sbjct: 275 TLKTMERQSGAKISIRGKGSVKTGK------GKMDADEDEEEMHCVVTADDEASVK--KC 326
Query: 62 ARAVEEVQKLLVPQAEGEDELKKRQLMELAIINGTYRDNNAKV 104
+ + +V + EGE++ K+ QL ELA +NGT RD+ ++
Sbjct: 327 IKLINQVIETAASTPEGENDHKRNQLRELAALNGTLRDDENQL 369
>sp|P0CO44|BBP_CRYNJ Branchpoint-bridging protein OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=BBP PE=3 SV=1
Length = 546
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 12/104 (11%)
Query: 4 KQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELKLAR 63
K++E E+G KI +RGKGS+++ K N + +ELH LI+ +D E K+
Sbjct: 275 KKMERESGAKISIRGKGSVKEGKGRAGNFPQDE----EDELHCLITADD-----ESKVKT 325
Query: 64 AVEEVQKLLVPQA---EGEDELKKRQLMELAIINGTYRDNNAKV 104
V + K++ A EGE++ K+ QL ELA +NGT RD+ ++
Sbjct: 326 CVALINKVIETAASTPEGENDHKRNQLRELASLNGTLRDDENQL 369
>sp|P0CO45|BBP_CRYNB Branchpoint-bridging protein OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=BBP PE=3 SV=1
Length = 546
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 12/104 (11%)
Query: 4 KQLELETGCKIMVRGKGSMRDKKKEEANRGKPNWEHLSEELHVLISVEDTENRAELKLAR 63
K++E E+G KI +RGKGS+++ K N + +ELH LI+ +D E K+
Sbjct: 275 KKMERESGAKISIRGKGSVKEGKGRAGNFPQDE----EDELHCLITADD-----ESKVKT 325
Query: 64 AVEEVQKLLVPQA---EGEDELKKRQLMELAIINGTYRDNNAKV 104
V + K++ A EGE++ K+ QL ELA +NGT RD+ ++
Sbjct: 326 CVALINKVIETAASTPEGENDHKRNQLRELASLNGTLRDDENQL 369
>sp|P13230|GRP33_ARTSA Glycine-rich protein GRP33 OS=Artemia salina PE=2 SV=1
Length = 308
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEE--ANRGKPNWEHLSEELHVLISVEDTENRAEL 59
T KQL+ ET KI + G+GSMRD+ KEE N G + HL+E+LH+ I + A
Sbjct: 101 TMKQLQDETMTKISILGRGSMRDRNKEEELRNSGDVKYAHLNEQLHIEIISIASPAEAHA 160
Query: 60 KLARAVEEVQKLLVPQ 75
++A A+ E++K + P+
Sbjct: 161 RMAYALTEIKKYITPE 176
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 70 KLLVPQAEGEDELKKRQLMELAIIN-GTYRDNNAKVLAAAVFVFSEEANRGKPNWEHLSE 128
KLL P +L+ + +++I+ G+ RD N + E N G + HL+E
Sbjct: 93 KLLGPGGSTMKQLQDETMTKISILGRGSMRDRNKE---------EELRNSGDVKYAHLNE 143
Query: 129 ELHVLISVEDTENRAELKLARAVEEVQKLLVP 160
+LH+ I + A ++A A+ E++K + P
Sbjct: 144 QLHIEIISIASPAEAHARMAYALTEIKKYITP 175
>sp|Q6BSP4|BBP_DEBHA Branchpoint-bridging protein OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=BBP PE=3 SV=2
Length = 518
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 66/113 (58%), Gaps = 20/113 (17%)
Query: 2 TAKQLELETGCKIMVRGKGSMRDKKKEEANRGK-----------PNWEHL-SEELHVLIS 49
T +QL+ ++G ++ +RGKGS++D K +N PN +++LHV+I+
Sbjct: 189 TLRQLQEDSGARLAIRGKGSVKDGKSTSSNNDDDDSNSSLSFSNPNLNSSGNDDLHVVIT 248
Query: 50 VEDTENRAELKLARAVEEVQKLL---VPQAEGEDELKKRQLMELAIINGTYRD 99
+ ++ K+A+A++ +++ + G+++LK+ QL ELAI+NGT R+
Sbjct: 249 SD-----SQSKIAKAIKLTNQVIEKAISSPVGQNDLKRGQLRELAILNGTLRE 296
>sp|O01705|EXT2_CAEEL Exostosin-2 OS=Caenorhabditis elegans GN=rib-2 PE=2 SV=2
Length = 814
Score = 32.3 bits (72), Expect = 1.4, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Query: 40 LSEELHVLISV--EDTENRAELKLARAVEEVQKLLVPQA-------EGEDELKKRQLMEL 90
L E+ +L SV E TE++ +++ R V+E + L+PQ EGE E +RQL EL
Sbjct: 73 LREQKRILASVRLELTESQVKIEEIRTVQEELQRLIPQKQLELSALEGEIEAAQRQLEEL 132
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.128 0.346
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,382,398
Number of Sequences: 539616
Number of extensions: 2176026
Number of successful extensions: 6095
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 5938
Number of HSP's gapped (non-prelim): 190
length of query: 160
length of database: 191,569,459
effective HSP length: 108
effective length of query: 52
effective length of database: 133,290,931
effective search space: 6931128412
effective search space used: 6931128412
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)