BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14722
(87 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P30274|CCNA2_BOVIN Cyclin-A2 OS=Bos taurus GN=CCNA2 PE=1 SV=2
Length = 430
Score = 79.0 bits (193), Expect = 9e-15, Method: Composition-based stats.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
A+ V ++EV EEYK+ NETLHLA+NY+DRFLS MSV+R KLQL+GT A+ +AS
Sbjct: 210 AILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLAS 263
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+ NETLHLA+NY+DRFLS MSV+R KLQL+GT A+ +AS E
Sbjct: 225 LQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFE 266
>sp|P20248|CCNA2_HUMAN Cyclin-A2 OS=Homo sapiens GN=CCNA2 PE=1 SV=2
Length = 432
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
A+ V ++EV EEYK+ NETLHLA+NY+DRFLS MSV+R KLQL+GT A+ +AS
Sbjct: 212 AILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLAS 265
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+ NETLHLA+NY+DRFLS MSV+R KLQL+GT A+ +AS E
Sbjct: 227 LQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFE 268
>sp|P37881|CCNA2_MESAU Cyclin-A2 OS=Mesocricetus auratus GN=CCNA2 PE=2 SV=1
Length = 421
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
A+ V ++EV EEYK+ NETLHLA+NY+DRFLS MSV+R KLQL+GT A+ +AS
Sbjct: 201 AILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLAS 254
Score = 62.8 bits (151), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+ NETLHLA+NY+DRFLS MSV+R KLQL+GT A+ +AS E
Sbjct: 216 LQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFE 257
>sp|P51943|CCNA2_MOUSE Cyclin-A2 OS=Mus musculus GN=Ccna2 PE=1 SV=2
Length = 422
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
A+ V ++EV EEYK+ NETLHLA+NY+DRFLS MSV+R KLQL+GT A+ +AS
Sbjct: 202 AILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLAS 255
Score = 62.8 bits (151), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+ NETLHLA+NY+DRFLS MSV+R KLQL+GT A+ +AS E
Sbjct: 217 LQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFE 258
>sp|P43449|CCNA2_CHICK Cyclin-A2 OS=Gallus gallus GN=CCNA2 PE=2 SV=1
Length = 395
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
A+ V ++EV EEYK+ NETLHLA+NY+DRFLS MSV+R KLQL+GT A+ +AS
Sbjct: 176 AILVDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLAS 229
Score = 62.4 bits (150), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+ NETLHLA+NY+DRFLS MSV+R KLQL+GT A+ +AS E
Sbjct: 191 LQNETLHLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFE 232
>sp|P47827|CCNA2_XENLA Cyclin-A2 OS=Xenopus laevis GN=ccna2 PE=2 SV=1
Length = 415
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
A+ V ++EV EEYK+ NETL+LA+NY+DRFLS MSV+R KLQL+GT A+ +AS
Sbjct: 194 AILVDWLVEVGEEYKLQNETLYLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLAS 247
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 35/42 (83%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+ NETL+LA+NY+DRFLS MSV+R KLQL+GT A+ +AS E
Sbjct: 209 LQNETLYLAVNYIDRFLSSMSVLRGKLQLVGTAAMLLASKFE 250
>sp|P18606|CCNA1_XENLA Cyclin-A1 OS=Xenopus laevis GN=ccna1 PE=2 SV=1
Length = 418
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 35 LFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
+ V ++EV EEYK+H ETL+LA+NY+DRFLS MSV+R KLQL+GT A+ +AS
Sbjct: 199 ILVDWLVEVGEEYKLHTETLYLAMNYLDRFLSCMSVLRGKLQLVGTAAILLAS 251
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 47/78 (60%), Gaps = 12/78 (15%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIEVAEEYKMHNETLHLAINY 60
+H ETL+LA+NY+DRFLS MSV+R KLQL+GT A+ +AS E E Y
Sbjct: 213 LHTETLYLAMNYLDRFLSCMSVLRGKLQLVGTAAILLASKYE--EIYPPD---------- 260
Query: 61 VDRFLSLMSVVRSKLQLL 78
VD F+ + SK QLL
Sbjct: 261 VDEFVYITDDTYSKKQLL 278
>sp|P24861|CCNA_PATVU G2/mitotic-specific cyclin-A OS=Patella vulgata PE=2 SV=1
Length = 426
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 45/54 (83%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
++ V ++EV+EEYK+H ETL LAINY+DRFLS MSV+R KLQL+G ++F+AS
Sbjct: 205 SILVDWMVEVSEEYKLHRETLFLAINYIDRFLSQMSVLRGKLQLVGAASMFIAS 258
Score = 58.9 bits (141), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+H ETL LAINY+DRFLS MSV+R KLQL+G ++F+AS E
Sbjct: 220 LHRETLFLAINYIDRFLSQMSVLRGKLQLVGAASMFIASKYE 261
>sp|Q6AY13|CCNA1_RAT Cyclin-A1 OS=Rattus norvegicus GN=Ccna1 PE=2 SV=1
Length = 421
Score = 72.4 bits (176), Expect = 8e-13, Method: Composition-based stats.
Identities = 33/57 (57%), Positives = 45/57 (78%)
Query: 31 GTTALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
G A+ V ++EV EEYK+ ETL+LA+N++DRFLS MSV+R KLQL+GT A+ +AS
Sbjct: 198 GMRAILVDWLVEVGEEYKLRTETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAILLAS 254
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 34/42 (80%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+ ETL+LA+N++DRFLS MSV+R KLQL+GT A+ +AS E
Sbjct: 216 LRTETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAILLASKYE 257
>sp|Q61456|CCNA1_MOUSE Cyclin-A1 OS=Mus musculus GN=Ccna1 PE=1 SV=2
Length = 421
Score = 72.0 bits (175), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/57 (57%), Positives = 45/57 (78%)
Query: 31 GTTALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
G A+ V ++EV EEYK+ ETL+LA+N++DRFLS MSV+R KLQL+GT A+ +AS
Sbjct: 198 GMRAILVDWLVEVGEEYKLRTETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAILLAS 254
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 34/42 (80%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+ ETL+LA+N++DRFLS MSV+R KLQL+GT A+ +AS E
Sbjct: 216 LRTETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAILLASKYE 257
>sp|P78396|CCNA1_HUMAN Cyclin-A1 OS=Homo sapiens GN=CCNA1 PE=1 SV=1
Length = 465
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 44/57 (77%)
Query: 31 GTTALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
G + V ++EV EEYK+ ETL+LA+N++DRFLS MSV+R KLQL+GT A+ +AS
Sbjct: 242 GMRTILVDWLVEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAMLLAS 298
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIEVAEEYKMHNETLHLAINY 60
+ ETL+LA+N++DRFLS MSV+R KLQL+GT A+ +AS E E Y
Sbjct: 260 LRAETLYLAVNFLDRFLSCMSVLRGKLQLVGTAAMLLASKYE--EIYPPE---------- 307
Query: 61 VDRFLSLMSVVRSKLQLLGTTALFV 85
VD F+ + +K QLL L +
Sbjct: 308 VDEFVYITDDTYTKRQLLKMEHLLL 332
>sp|P14785|CCNA_DROME G2/mitotic-specific cyclin-A OS=Drosophila melanogaster GN=CycA
PE=2 SV=3
Length = 491
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 46/54 (85%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
++ + ++EV+EEYK+ ETL+L++ Y+DRFLS M+VVRSKLQL+GT A+++A+
Sbjct: 237 SILIDWLVEVSEEYKLDTETLYLSVFYLDRFLSQMAVVRSKLQLVGTAAMYIAA 290
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 35/42 (83%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+ ETL+L++ Y+DRFLS M+VVRSKLQL+GT A+++A+ E
Sbjct: 252 LDTETLYLSVFYLDRFLSQMAVVRSKLQLVGTAAMYIAAKYE 293
>sp|Q92161|CCNA1_CARAU Cyclin-A1 OS=Carassius auratus GN=ccna1 PE=2 SV=1
Length = 391
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/53 (58%), Positives = 43/53 (81%)
Query: 35 LFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
+ V ++EV EEYK+ +ETL LA+NY+DRFLS MSV+R KLQL+GT A+ +A+
Sbjct: 172 ILVDWLVEVGEEYKLCSETLFLAVNYLDRFLSCMSVLRGKLQLVGTAAVLLAA 224
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 3 NETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+ETL LA+NY+DRFLS MSV+R KLQL+GT A+ +A+ E
Sbjct: 188 SETLFLAVNYLDRFLSCMSVLRGKLQLVGTAAVLLAAKYE 227
>sp|P04962|CCNA_SPISO G2/mitotic-specific cyclin-A OS=Spisula solidissima PE=2 SV=1
Length = 422
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 35 LFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
+ V ++EV+EE K+H ETL L +NY+DRFLS +SV+R KLQL+G ++F+A+
Sbjct: 198 ILVDWLVEVSEEDKLHRETLFLGVNYIDRFLSKISVLRGKLQLVGAASMFLAA 250
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+H ETL L +NY+DRFLS +SV+R KLQL+G ++F+A+ E
Sbjct: 212 LHRETLFLGVNYIDRFLSKISVLRGKLQLVGAASMFLAAKYE 253
>sp|Q9FMH5|CCA31_ARATH Putative cyclin-A3-1 OS=Arabidopsis thaliana GN=CYCA3-1 PE=3 SV=1
Length = 355
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 44/54 (81%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
+ V ++EVAEEYK+ ++TL+LA++Y+DRFLSL +V + +LQLLG T++ +AS
Sbjct: 122 GVLVDWLVEVAEEYKLLSDTLYLAVSYIDRFLSLKTVNKQRLQLLGVTSMLIAS 175
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 33/40 (82%)
Query: 3 NETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
++TL+LA++Y+DRFLSL +V + +LQLLG T++ +AS E
Sbjct: 139 SDTLYLAVSYIDRFLSLKTVNKQRLQLLGVTSMLIASKYE 178
>sp|Q75I54|CCA31_ORYSJ Cyclin-A3-1 OS=Oryza sativa subsp. japonica GN=CYCA3-1 PE=3 SV=1
Length = 373
Score = 62.4 bits (150), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 42/54 (77%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
+ V ++EVAEEYK+ ++TL+L ++Y+DRFLS S+ R KLQLLG +A+ +AS
Sbjct: 140 GILVDWLVEVAEEYKLVSDTLYLTVSYIDRFLSAKSINRQKLQLLGVSAMLIAS 193
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 3 NETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
++TL+L ++Y+DRFLS S+ R KLQLLG +A+ +AS E
Sbjct: 157 SDTLYLTVSYIDRFLSAKSINRQKLQLLGVSAMLIASKYE 196
>sp|Q9C6A9|CCA32_ARATH Cyclin-A3-2 OS=Arabidopsis thaliana GN=CYCA3-2 PE=2 SV=1
Length = 372
Score = 62.4 bits (150), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 43/54 (79%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
+ V ++EVAEEYK+ +ETL+L ++++DRFLSL +V + KLQL+G +A+ +AS
Sbjct: 139 GVLVDWLVEVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIAS 192
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 32/40 (80%)
Query: 3 NETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+ETL+L ++++DRFLSL +V + KLQL+G +A+ +AS E
Sbjct: 156 SETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYE 195
>sp|Q3ECW2|CCA34_ARATH Cyclin-A3-4 OS=Arabidopsis thaliana GN=CYCA3-4 PE=1 SV=1
Length = 370
Score = 62.0 bits (149), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 43/54 (79%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
A+ V ++EVAEEYK+ ++TL+L I+YVDRFLS+ + R KLQL+G +A+ +AS
Sbjct: 132 AVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIAS 185
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 30/37 (81%)
Query: 3 NETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 39
++TL+L I+YVDRFLS+ + R KLQL+G +A+ +AS
Sbjct: 149 SDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIAS 185
>sp|P51986|CCNA_HYDVD G2/mitotic-specific cyclin-A (Fragment) OS=Hydra viridissima PE=2
SV=1
Length = 420
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 43/54 (79%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
A+ + ++EV+EEYK+ +TL+L+++Y+DRFLS MSV+R KLQL+G + VA+
Sbjct: 199 AILIDWLVEVSEEYKLIPQTLYLSVSYIDRFLSHMSVLRGKLQLVGAACMLVAA 252
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 31/39 (79%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+TL+L+++Y+DRFLS MSV+R KLQL+G + VA+ E
Sbjct: 217 QTLYLSVSYIDRFLSHMSVLRGKLQLVGAACMLVAAKFE 255
>sp|Q2QQ96|CCA21_ORYSJ Cyclin-A2-1 OS=Oryza sativa subsp. japonica GN=CYCA2-1 PE=2 SV=1
Length = 490
Score = 59.7 bits (143), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 40/57 (70%)
Query: 31 GTTALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
G + + ++EV+EEYK+ +TL+L IN +DRFLS + R KLQLLG T++ +AS
Sbjct: 259 GMRGILIDWLVEVSEEYKLVPDTLYLTINLIDRFLSQHYIERQKLQLLGITSMLIAS 315
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+TL+L IN +DRFLS + R KLQLLG T++ +AS E
Sbjct: 280 DTLYLTINLIDRFLSQHYIERQKLQLLGITSMLIASKYE 318
>sp|Q9FVX0|CCA12_ARATH Cyclin-A1-2 OS=Arabidopsis thaliana GN=CYCA1-2 PE=1 SV=2
Length = 442
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 7 HLAINYVDRFLSLMSVVRSKLQLLGTT-ALFVASIIEVAEEYKMHNETLHLAINYVDRFL 65
HL ++ V++ +L + R++ + + ++ + ++EVAEEY++ ETL+LA+NYVDR+L
Sbjct: 185 HLRVSEVNKRPALDYMERTQSSINASMRSILIDWLVEVAEEYRLSPETLYLAVNYVDRYL 244
Query: 66 SLMSVVRSKLQLLGTTALFVAS 87
+ ++ + LQLLG T + +A+
Sbjct: 245 TGNAINKQNLQLLGVTCMMIAA 266
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
ETL+LA+NYVDR+L+ ++ + LQLLG T + +A+ E
Sbjct: 231 ETLYLAVNYVDRYLTGNAINKQNLQLLGVTCMMIAAKYE 269
>sp|P24385|CCND1_HUMAN G1/S-specific cyclin-D1 OS=Homo sapiens GN=CCND1 PE=1 SV=1
Length = 295
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 40 IIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
++EV EE K E LA+NY+DRFLSL V +S+LQLLG T +FVAS
Sbjct: 64 MLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVAS 111
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 39
E LA+NY+DRFLSL V +S+LQLLG T +FVAS
Sbjct: 76 EVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVAS 111
>sp|Q5R6J5|CCND1_PONAB G1/S-specific cyclin-D1 OS=Pongo abelii GN=CCND1 PE=2 SV=1
Length = 295
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 40 IIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
++EV EE K E LA+NY+DRFLSL V +S+LQLLG T +FVAS
Sbjct: 64 MLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVAS 111
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 39
E LA+NY+DRFLSL V +S+LQLLG T +FVAS
Sbjct: 76 EVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVAS 111
>sp|P39948|CCND1_RAT G1/S-specific cyclin-D1 OS=Rattus norvegicus GN=Ccnd1 PE=2 SV=1
Length = 295
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 40 IIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
++EV EE K E LA+NY+DRFLSL + +S+LQLLG T +FVAS
Sbjct: 64 MLEVCEEQKCEEEVFPLAMNYLDRFLSLEPLKKSRLQLLGATCMFVAS 111
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 39
E LA+NY+DRFLSL + +S+LQLLG T +FVAS
Sbjct: 76 EVFPLAMNYLDRFLSLEPLKKSRLQLLGATCMFVAS 111
>sp|P25322|CCND1_MOUSE G1/S-specific cyclin-D1 OS=Mus musculus GN=Ccnd1 PE=1 SV=1
Length = 295
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 40 IIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
++EV EE K E LA+NY+DRFLSL + +S+LQLLG T +FVAS
Sbjct: 64 MLEVCEEQKCEEEVFPLAMNYLDRFLSLEPLKKSRLQLLGATCMFVAS 111
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 39
E LA+NY+DRFLSL + +S+LQLLG T +FVAS
Sbjct: 76 EVFPLAMNYLDRFLSLEPLKKSRLQLLGATCMFVAS 111
>sp|Q0DJR9|CCA14_ORYSJ Cyclin-A1-4 OS=Oryza sativa subsp. japonica GN=CYCA1-4 PE=2 SV=2
Length = 356
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
A+ + ++EV EEY++ ETL+L +NY+DR+LS + R K+QLLG L +AS
Sbjct: 119 AVLIDWLVEVTEEYRLVPETLYLTVNYIDRYLSSKVINRRKMQLLGVACLLIAS 172
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
ETL+L +NY+DR+LS + R K+QLLG L +AS E
Sbjct: 137 ETLYLTVNYIDRYLSSKVINRRKMQLLGVACLLIASKYE 175
>sp|Q2KI22|CCND1_BOVIN G1/S-specific cyclin-D1 OS=Bos taurus GN=CCND1 PE=2 SV=1
Length = 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 40 IIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
++EV EE K E LA+NY+DRFLSL V +S+LQLLG T +FVAS
Sbjct: 64 MLEVCEEQKCEEEVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVAS 111
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 29/112 (25%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE-----VAEEYKMH-------N 51
E LA+NY+DRFLSL V +S+LQLLG T +FVAS ++ AE+ ++ +
Sbjct: 76 EVFPLAMNYLDRFLSLEPVKKSRLQLLGATCMFVASKMKETIPLTAEKLCIYTDNSIRPD 135
Query: 52 ETLHLAI----------------NYVDRFLSLMSVVRSKLQLLGTTA-LFVA 86
E LH+ + ++++ FLS M V Q++ A FVA
Sbjct: 136 ELLHMELVLVNKLKWNLAAMTPHDFIEHFLSKMPVAEENKQIIRKHAQTFVA 187
>sp|Q0INT0|CCA13_ORYSJ Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3 PE=2 SV=2
Length = 491
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 39/54 (72%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
A+ + ++EVAEEY++ +TL+L +NY+DR+LS + R +LQLLG + +A+
Sbjct: 258 AILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAA 311
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 39
+TL+L +NY+DR+LS + R +LQLLG + +A+
Sbjct: 276 DTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAA 311
>sp|Q0JPA4|CCA12_ORYSJ Cyclin-A1-2 OS=Oryza sativa subsp. japonica GN=CYCA1-2 PE=3 SV=2
Length = 477
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 39/54 (72%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
A+ + ++EVAEEY++ +TL+L +NY+DR+LS + R +LQLLG + +A+
Sbjct: 245 AILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAA 298
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+TL+L +NY+DR+LS + R +LQLLG + +A+ E
Sbjct: 263 DTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAAKYE 301
>sp|P25010|CCNAL_DAUCA G2/mitotic-specific cyclin C13-1 (Fragment) OS=Daucus carota PE=2
SV=1
Length = 341
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
+ V ++EV+ EYK+ ETL+LAI+YVDR+LS+ + R KLQLLG ++ +AS
Sbjct: 111 GVLVDWLVEVSLEYKLLPETLYLAISYVDRYLSVNVLNRQKLQLLGVSSFLIAS 164
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIEVAEEYKMHNETLHLAINYVDR 63
ETL+LAI+YVDR+LS+ + R KLQLLG ++ +AS EE K N + ++ D
Sbjct: 129 ETLYLAISYVDRYLSVNVLNRQKLQLLGVSSFLIAS---KYEEIKPKN--VADFVDITDN 183
Query: 64 FLSLMSVVRSKLQLLGTTALFVAS 87
S VV+ + LL T + S
Sbjct: 184 TYSQQEVVKMEADLLKTLKFEMGS 207
>sp|Q7F830|CCA11_ORYSJ Cyclin-A1-1 OS=Oryza sativa subsp. japonica GN=CYCA1-1 PE=2 SV=1
Length = 508
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 39/54 (72%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
A+ + ++EVAEEY++ +TL+L +NY+DR+LS + R +LQLLG + +A+
Sbjct: 275 AILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAA 328
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+TL+L +NY+DR+LS + R +LQLLG + +A+ E
Sbjct: 293 DTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAAKYE 331
>sp|Q10Q63|CCF31_ORYSJ Putative cyclin-F3-1 OS=Oryza sativa subsp. japonica GN=CYCF3-1
PE=3 SV=1
Length = 389
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
+ V + +VA + + ETLH A++YVDRFLS ++ KL+LLGTTALFVAS
Sbjct: 152 GILVDWMADVAYVFNLQEETLHHAVSYVDRFLSKIAFPGDKLKLLGTTALFVAS 205
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+ ETLH A++YVDRFLS ++ KL+LLGTTALFVAS E
Sbjct: 167 LQEETLHHAVSYVDRFLSKIAFPGDKLKLLGTTALFVASKYE 208
>sp|Q2QN26|CCA32_ORYSJ Cyclin-A3-2 OS=Oryza sativa subsp. japonica GN=CYCA3-2 PE=2 SV=1
Length = 385
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 42/54 (77%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
A+ V ++EVA+EYK+ +TL+LA++Y+DR+LS + R++LQLLG A+ +A+
Sbjct: 152 AILVDWLVEVADEYKLVADTLYLAVSYLDRYLSAHPLRRNRLQLLGVGAMLIAA 205
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 30/39 (76%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+TL+LA++Y+DR+LS + R++LQLLG A+ +A+ E
Sbjct: 170 DTLYLAVSYLDRYLSAHPLRRNRLQLLGVGAMLIAAKYE 208
>sp|A0MEB5|CCA33_ARATH Cyclin-A3-3 OS=Arabidopsis thaliana GN=CYCA3-3 PE=2 SV=2
Length = 327
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 41/54 (75%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
+ V ++EVAEE+++ +ETL+L ++Y+DRFLSL V LQL+G +A+F+AS
Sbjct: 93 GVLVDWLVEVAEEFELVSETLYLTVSYIDRFLSLKMVNEHWLQLVGVSAMFIAS 146
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 3 NETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+ETL+L ++Y+DRFLSL V LQL+G +A+F+AS E
Sbjct: 110 SETLYLTVSYIDRFLSLKMVNEHWLQLVGVSAMFIASKYE 149
>sp|P54733|CCNE_DROME G1/S-specific cyclin-E OS=Drosophila melanogaster GN=CycE PE=1 SV=2
Length = 709
Score = 55.8 bits (133), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLM-SVVRSKLQLLGTTALFVAS 87
A+ + +IEV E YK+H ET +LA++Y+DR+L + V ++ LQL+G T LFVA+
Sbjct: 363 AILLDWLIEVCEVYKLHRETFYLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAA 417
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 1 MHNETLHLAINYVDRFLSLM-SVVRSKLQLLGTTALFVASIIE 42
+H ET +LA++Y+DR+L + V ++ LQL+G T LFVA+ +E
Sbjct: 378 LHRETFYLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVE 420
>sp|O42575|CCNE3_XENLA G1/S-specific cyclin-E3 OS=Xenopus laevis GN=cyce3 PE=2 SV=1
Length = 408
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLM-SVVRSKLQLLGTTALFVAS 87
A+ + ++EV E YK+H ET +LA ++ DRF++ +V++S+LQL+G T+LF+A+
Sbjct: 145 AILLDWLMEVCEVYKLHRETFYLAQDFFDRFMATQKNVIKSRLQLIGITSLFIAA 199
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 1 MHNETLHLAINYVDRFLSLM-SVVRSKLQLLGTTALFVASIIEVAEEYKMH 50
+H ET +LA ++ DRF++ +V++S+LQL+G T+LF+A+ +E K+H
Sbjct: 160 LHRETFYLAQDFFDRFMATQKNVIKSRLQLIGITSLFIAAKMEEIYPPKLH 210
>sp|Q91780|CCNE2_XENLA G1/S-specific cyclin-E2 OS=Xenopus laevis GN=cyce2 PE=2 SV=1
Length = 408
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLM-SVVRSKLQLLGTTALFVAS 87
A+ + ++EV E YK+H ET +LA ++ DRF++ +V++S+LQL+G T+LF+A+
Sbjct: 145 AILLDWLMEVCEVYKLHRETFYLAQDFFDRFMATQKNVIKSRLQLIGITSLFIAA 199
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 1 MHNETLHLAINYVDRFLSLM-SVVRSKLQLLGTTALFVASIIEVAEEYKMH 50
+H ET +LA ++ DRF++ +V++S+LQL+G T+LF+A+ +E K+H
Sbjct: 160 LHRETFYLAQDFFDRFMATQKNVIKSRLQLIGITSLFIAAKLEEIYPPKLH 210
>sp|P50756|CCNE1_XENLA G1/S-specific cyclin-E1 OS=Xenopus laevis GN=cyce1 PE=2 SV=1
Length = 408
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLM-SVVRSKLQLLGTTALFVAS 87
A+ + ++EV E YK+H ET +LA ++ DRF++ +V++S+LQL+G T+LF+A+
Sbjct: 145 AILLDWLMEVCEVYKLHRETFYLAQDFFDRFMATQKNVIKSRLQLIGITSLFIAA 199
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 1 MHNETLHLAINYVDRFLSLM-SVVRSKLQLLGTTALFVASIIEVAEEYKMH 50
+H ET +LA ++ DRF++ +V++S+LQL+G T+LF+A+ +E K+H
Sbjct: 160 LHRETFYLAQDFFDRFMATQKNVIKSRLQLIGITSLFIAAKLEEIYPPKLH 210
>sp|Q9C6Y3|CCA11_ARATH Cyclin-A1-1 OS=Arabidopsis thaliana GN=CYCA1-1 PE=1 SV=1
Length = 460
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
+ V +IEV+EEY++ ETL+L +NY+DR+LS + R KLQLLG + +A+
Sbjct: 229 GILVDWLIEVSEEYRLVPETLYLTVNYIDRYLSGNVISRQKLQLLGVACMMIAA 282
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
ETL+L +NY+DR+LS + R KLQLLG + +A+ E
Sbjct: 247 ETLYLTVNYIDRYLSGNVISRQKLQLLGVACMMIAAKYE 285
>sp|Q64HP0|CCND1_CANFA G1/S-specific cyclin-D1 OS=Canis familiaris GN=CCND1 PE=2 SV=1
Length = 295
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 40 IIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
++EV EE K E LA+NY++RFLSL V +S+LQLLG T +FVAS
Sbjct: 64 MLEVCEEQKCEEEVFPLAMNYLNRFLSLEPVKKSRLQLLGATCMFVAS 111
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 39
E LA+NY++RFLSL V +S+LQLLG T +FVAS
Sbjct: 76 EVFPLAMNYLNRFLSLEPVKKSRLQLLGATCMFVAS 111
>sp|O15995|CCNE_HEMPU G1/S-specific cyclin-E OS=Hemicentrotus pulcherrimus GN=CYCE PE=2
SV=1
Length = 424
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLM-SVVRSKLQLLGTTALFVAS 87
A+ + +IEV E Y++H E+ +LA ++VDR+L+ +V ++KLQL+G T+LFVA+
Sbjct: 157 AILLDWLIEVCEVYRLHRESFYLAADFVDRYLAAKENVPKTKLQLIGITSLFVAA 211
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 1 MHNETLHLAINYVDRFLSLM-SVVRSKLQLLGTTALFVASIIEVAEEYKMH 50
+H E+ +LA ++VDR+L+ +V ++KLQL+G T+LFVA+ +E K+H
Sbjct: 172 LHRESFYLAADFVDRYLAAKENVPKTKLQLIGITSLFVAAKLEEIYPPKLH 222
>sp|Q39071|CCA21_ARATH Cyclin-A2-1 OS=Arabidopsis thaliana GN=CYCA2-1 PE=2 SV=3
Length = 443
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 39/54 (72%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
+ + ++EV+EEYK+ ++TL+L +N +DRF+S + + KLQLLG T + +AS
Sbjct: 214 GILIDWLVEVSEEYKLVSDTLYLTVNLIDRFMSHNYIEKQKLQLLGITCMLIAS 267
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 3 NETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
++TL+L +N +DRF+S + + KLQLLG T + +AS E
Sbjct: 231 SDTLYLTVNLIDRFMSHNYIEKQKLQLLGITCMLIASKYE 270
>sp|Q9LDM4|CCB23_ARATH Cyclin-B2-3 OS=Arabidopsis thaliana GN=CYCB2-3 PE=2 SV=2
Length = 429
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 38/53 (71%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVA 86
+ + +IEV ++++ ETL+L IN +DRFL++ +VR KLQL+G TAL +A
Sbjct: 211 GILIDWLIEVHYKFELMEETLYLTINVIDRFLAVHQIVRKKLQLVGVTALLLA 263
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+ ETL+L IN +DRFL++ +VR KLQL+G TAL +A E
Sbjct: 226 LMEETLYLTINVIDRFLAVHQIVRKKLQLVGVTALLLACKYE 267
>sp|P55169|CCND1_CHICK G1/S-specific cyclin-D1 OS=Gallus gallus GN=CCND1 PE=2 SV=1
Length = 292
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/48 (54%), Positives = 34/48 (70%)
Query: 40 IIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
++EV EE K E LA+NY+DRFLS + +S+LQLLG T +FVAS
Sbjct: 64 MLEVCEEQKCEEEVFPLAMNYLDRFLSFEPLKKSRLQLLGATCMFVAS 111
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 27/36 (75%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 39
E LA+NY+DRFLS + +S+LQLLG T +FVAS
Sbjct: 76 EVFPLAMNYLDRFLSFEPLKKSRLQLLGATCMFVAS 111
>sp|P39949|CCNE1_RAT G1/S-specific cyclin-E1 OS=Rattus norvegicus GN=Ccne1 PE=2 SV=2
Length = 411
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 51/75 (68%), Gaps = 6/75 (8%)
Query: 14 DRFLSLMSVVRSKLQLLGTTALFVASIIEVAEEYKMHNETLHLAINYVDRFL-SLMSVVR 72
+ FL +++++++ A+ + ++EV E YK+H ET +LA ++ DR++ S ++++
Sbjct: 132 EHFLQRHPLLQARMR-----AVLLDWLMEVCEVYKLHRETFYLAQDFFDRYMASQQNIIK 186
Query: 73 SKLQLLGTTALFVAS 87
+ LQL+G +ALF+AS
Sbjct: 187 TLLQLIGISALFIAS 201
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 1 MHNETLHLAINYVDRFL-SLMSVVRSKLQLLGTTALFVASIIEVAEEYKMH 50
+H ET +LA ++ DR++ S +++++ LQL+G +ALF+AS +E K+H
Sbjct: 162 LHRETFYLAQDFFDRYMASQQNIIKTLLQLIGISALFIASKLEEIYPPKLH 212
>sp|P39963|CCNB3_CHICK G2/mitotic-specific cyclin-B3 OS=Gallus gallus GN=CCNB3 PE=2 SV=1
Length = 403
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 40/54 (74%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
A+ V ++EV E +++++ETL+LA+ VD +L + +R KLQL+G+TA+ +AS
Sbjct: 179 AILVDWMVEVQENFELNHETLYLAVKLVDHYLVEVVSMRDKLQLIGSTAVLIAS 232
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+++ETL+LA+ VD +L + +R KLQL+G+TA+ +AS E
Sbjct: 194 LNHETLYLAVKLVDHYLVEVVSMRDKLQLIGSTAVLIASKFE 235
>sp|Q61457|CCNE1_MOUSE G1/S-specific cyclin-E1 OS=Mus musculus GN=Ccne1 PE=1 SV=2
Length = 408
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 51/75 (68%), Gaps = 6/75 (8%)
Query: 14 DRFLSLMSVVRSKLQLLGTTALFVASIIEVAEEYKMHNETLHLAINYVDRFL-SLMSVVR 72
+ FL +++++++ A+ + ++EV E YK+H ET +LA ++ DR++ S ++++
Sbjct: 129 EHFLQRHPLLQARMR-----AVLLDWLMEVCEVYKLHRETFYLAQDFFDRYMASQHNIIK 183
Query: 73 SKLQLLGTTALFVAS 87
+ LQL+G +ALF+AS
Sbjct: 184 TLLQLIGISALFIAS 198
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 1 MHNETLHLAINYVDRFL-SLMSVVRSKLQLLGTTALFVASIIEVAEEYKMH 50
+H ET +LA ++ DR++ S +++++ LQL+G +ALF+AS +E K+H
Sbjct: 159 LHRETFYLAQDFFDRYMASQHNIIKTLLQLIGISALFIASKLEEIYPPKLH 209
>sp|Q10Q62|CCF32_ORYSJ Putative cyclin-F3-2 OS=Oryza sativa subsp. japonica GN=CYCF3-2
PE=3 SV=1
Length = 406
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 42 EVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
E+ + + + L+LA++YVDRFLS V R +LQLLGT+ALFVAS
Sbjct: 178 ELVYGFNLWDNILYLAVSYVDRFLSRNVVNRERLQLLGTSALFVAS 223
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 3 NETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
+ L+LA++YVDRFLS V R +LQLLGT+ALFVAS E
Sbjct: 187 DNILYLAVSYVDRFLSRNVVNRERLQLLGTSALFVASKYE 226
>sp|Q39069|CCB13_ARATH Cyclin-B1-3 OS=Arabidopsis thaliana GN=CYCB1-3 PE=2 SV=2
Length = 414
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 39/54 (72%)
Query: 34 ALFVASIIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVAS 87
++ + ++EV ++ + ETL+L +N +DRFLSL +V R +LQL+G +AL +AS
Sbjct: 192 SILIDWLVEVHVKFDLSPETLYLTVNIIDRFLSLKTVPRRELQLVGVSALLIAS 245
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 4 ETLHLAINYVDRFLSLMSVVRSKLQLLGTTALFVASIIE 42
ETL+L +N +DRFLSL +V R +LQL+G +AL +AS E
Sbjct: 210 ETLYLTVNIIDRFLSLKTVPRRELQLVGVSALLIASKYE 248
>sp|O01501|CCNE_CAEEL G1/S-specific cyclin-E OS=Caenorhabditis elegans GN=cye-1 PE=2 SV=2
Length = 524
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 40 IIEVAEEYKMHNETLHLAINYVDRFLSLMSVVRS--KLQLLGTTALFVAS 87
++EV E K+H ET HLA++YVDR+L +V S QL+GT ALF+A+
Sbjct: 269 MMEVCESEKLHRETFHLAVDYVDRYLESSNVECSTDNFQLVGTAALFIAA 318
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 1 MHNETLHLAINYVDRFLSLMSVVRS--KLQLLGTTALFVASIIE 42
+H ET HLA++YVDR+L +V S QL+GT ALF+A+ E
Sbjct: 278 LHRETFHLAVDYVDRYLESSNVECSTDNFQLVGTAALFIAAKYE 321
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.135 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,225,653
Number of Sequences: 539616
Number of extensions: 619731
Number of successful extensions: 2709
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2303
Number of HSP's gapped (non-prelim): 390
length of query: 87
length of database: 191,569,459
effective HSP length: 57
effective length of query: 30
effective length of database: 160,811,347
effective search space: 4824340410
effective search space used: 4824340410
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)