Query psy14726
Match_columns 712
No_of_seqs 634 out of 3910
Neff 9.6
Searched_HMMs 29240
Date Fri Aug 16 19:06:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14726.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14726hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xn4_A Kelch-like protein 2; s 100.0 3.9E-49 1.3E-53 409.3 38.8 292 340-634 5-302 (302)
2 1zgk_A Kelch-like ECH-associat 100.0 1.4E-48 4.7E-53 406.2 37.8 283 345-630 22-308 (308)
3 3ii7_A Kelch-like protein 7; p 100.0 1E-48 3.4E-53 407.0 36.6 287 341-633 4-296 (306)
4 2vpj_A Kelch-like protein 12; 100.0 1.4E-48 4.9E-53 404.8 37.7 290 340-631 6-300 (301)
5 4asc_A Kelch repeat and BTB do 100.0 4.1E-47 1.4E-51 396.4 31.5 280 348-637 5-303 (315)
6 2woz_A Kelch repeat and BTB do 100.0 2.2E-46 7.4E-51 391.5 31.2 286 342-637 7-313 (318)
7 1zgk_A Kelch-like ECH-associat 100.0 1E-45 3.6E-50 384.5 30.7 293 382-692 10-306 (308)
8 2xn4_A Kelch-like protein 2; s 100.0 6.3E-45 2.1E-49 377.6 33.1 283 393-692 12-296 (302)
9 3i3n_A Kelch-like protein 11; 100.0 1.9E-45 6.6E-50 374.8 18.6 250 72-323 12-269 (279)
10 3ii7_A Kelch-like protein 7; p 100.0 1.3E-43 4.5E-48 368.4 32.2 276 396-692 11-291 (306)
11 2vpj_A Kelch-like protein 12; 100.0 1.6E-43 5.6E-48 366.8 30.8 280 395-691 13-296 (301)
12 3hve_A Gigaxonin; ubiquitin, c 100.0 5.3E-45 1.8E-49 366.9 8.6 243 71-316 10-255 (256)
13 4asc_A Kelch repeat and BTB do 100.0 2.1E-41 7.1E-46 353.3 28.3 277 396-690 4-292 (315)
14 2uvk_A YJHT; unknown function, 100.0 1.7E-40 5.8E-45 352.9 30.0 259 380-642 3-327 (357)
15 2woz_A Kelch repeat and BTB do 100.0 1.4E-40 4.9E-45 347.4 28.9 295 385-699 7-311 (318)
16 2uvk_A YJHT; unknown function, 100.0 5.3E-40 1.8E-44 349.1 30.6 268 347-620 19-353 (357)
17 2zwa_A Leucine carboxyl methyl 100.0 8.2E-39 2.8E-43 366.9 21.7 327 266-609 315-694 (695)
18 2zwa_A Leucine carboxyl methyl 100.0 5.7E-36 2E-40 343.3 26.7 253 381-639 383-673 (695)
19 1k3i_A Galactose oxidase precu 100.0 4.5E-35 1.5E-39 335.9 22.8 287 347-640 197-530 (656)
20 1k3i_A Galactose oxidase precu 100.0 7.1E-34 2.4E-38 326.0 17.3 308 365-692 168-516 (656)
21 3htm_A Speckle-type POZ protei 100.0 9.6E-29 3.3E-33 232.8 12.8 150 77-228 19-168 (172)
22 3hqi_A Speckle-type POZ protei 99.9 3.3E-26 1.1E-30 237.0 13.2 150 77-228 159-308 (312)
23 4eoz_A Speckle-type POZ protei 99.9 1.1E-26 3.7E-31 212.1 6.7 136 77-214 10-145 (145)
24 2if5_A Zinc finger and BTB dom 99.9 8.4E-25 2.9E-29 192.1 11.2 115 73-189 6-120 (120)
25 2z8h_A Transcription regulator 99.9 7.3E-25 2.5E-29 197.2 10.9 125 68-196 12-137 (138)
26 1r29_A B-cell lymphoma 6 prote 99.9 1.5E-24 5E-29 192.5 11.7 118 71-191 8-126 (127)
27 2yy9_A Zinc finger and BTB dom 99.9 7.9E-25 2.7E-29 195.9 8.4 118 73-196 6-123 (135)
28 3b84_A Zinc finger and BTB dom 99.9 1E-24 3.6E-29 190.7 8.9 112 74-191 6-117 (119)
29 2ppi_A Gigaxonin; BTB domain, 99.9 1.3E-24 4.6E-29 196.5 9.0 120 68-189 23-144 (144)
30 1buo_A POZ domain, protein (pr 99.9 5.6E-24 1.9E-28 186.8 11.0 114 71-191 7-120 (121)
31 2vpk_A Myoneurin; transcriptio 99.9 4.8E-24 1.6E-28 185.9 10.2 111 74-190 4-116 (116)
32 3ohu_A Transcription regulator 99.9 1.8E-24 6.1E-29 191.4 5.2 113 72-188 12-125 (125)
33 3ga1_A Nucleus accumbens-assoc 99.9 4.3E-24 1.5E-28 189.9 5.2 119 68-192 9-128 (129)
34 2q81_A MIZ-1 protein; BTB/POZ 99.9 9.7E-24 3.3E-28 184.6 6.7 110 73-189 8-117 (119)
35 2ihc_A Transcription regulator 99.9 4.7E-24 1.6E-28 188.0 4.7 114 72-189 9-123 (124)
36 2vkp_A BTB/POZ domain-containi 99.9 2.2E-23 7.6E-28 179.7 6.0 105 86-192 2-109 (109)
37 3fkc_A Transcriptional regulat 99.9 2.8E-22 9.5E-27 174.0 10.5 109 67-182 6-115 (116)
38 3m5b_A Zinc finger and BTB dom 99.9 4.8E-22 1.6E-26 172.9 7.4 103 75-190 15-117 (119)
39 2eqx_A Kelch repeat and BTB do 99.7 1.5E-17 5.2E-22 140.6 7.4 96 188-287 4-99 (105)
40 2ast_A S-phase kinase-associat 99.5 6.9E-15 2.4E-19 134.3 8.2 105 95-201 3-135 (159)
41 4ajy_C Transcription elongatio 99.4 1.2E-12 4.1E-17 108.5 7.4 81 95-177 4-97 (97)
42 1fs1_B SKP1, cyclin A/CDK2-ass 99.3 6.1E-12 2.1E-16 111.9 7.8 102 95-202 4-131 (141)
43 2p1m_A SKP1-like protein 1A; F 99.2 4.7E-12 1.6E-16 115.3 1.2 108 95-207 6-143 (160)
44 1hv2_A Elongin C, ELC1; protei 98.7 2.5E-08 8.7E-13 82.3 6.7 81 94-177 5-99 (99)
45 3v7d_A Suppressor of kinetocho 98.7 3.7E-08 1.3E-12 90.1 8.4 98 93-192 7-133 (169)
46 2fnj_C Transcription elongatio 98.6 2.9E-08 9.9E-13 81.5 5.5 81 95-177 3-96 (96)
47 3dsm_A Uncharacterized protein 98.6 6.8E-05 2.3E-09 77.3 30.7 250 362-638 16-285 (328)
48 1vcb_B Protein (elongin C); tu 98.3 8.6E-07 2.9E-11 74.6 6.1 82 94-177 18-112 (112)
49 3dsm_A Uncharacterized protein 98.2 0.00031 1.1E-08 72.3 25.4 232 348-609 54-302 (328)
50 3mbr_X Glutamine cyclotransfer 98.2 0.00046 1.6E-08 66.7 24.3 185 387-592 21-223 (243)
51 3drz_A BTB/POZ domain-containi 98.2 2.2E-06 7.6E-11 71.8 6.5 93 94-189 7-105 (107)
52 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.003 1E-07 66.0 32.3 250 342-637 48-324 (376)
53 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.0025 8.6E-08 66.6 28.5 231 363-637 113-365 (376)
54 3nol_A Glutamine cyclotransfer 98.0 0.00087 3E-08 65.3 22.3 183 389-592 45-244 (262)
55 3mbr_X Glutamine cyclotransfer 97.9 0.0011 3.9E-08 63.9 19.5 158 434-612 21-182 (243)
56 2iwa_A Glutamine cyclotransfer 97.8 0.0033 1.1E-07 61.9 21.4 186 389-595 23-228 (266)
57 3nok_A Glutaminyl cyclase; bet 97.7 0.0025 8.7E-08 62.0 19.4 153 389-565 57-213 (268)
58 1l0q_A Surface layer protein; 97.6 0.0031 1.1E-07 66.0 20.3 226 349-613 3-237 (391)
59 3jrp_A Fusion protein of prote 97.6 0.0064 2.2E-07 62.9 22.5 242 348-620 23-299 (379)
60 3nol_A Glutamine cyclotransfer 97.6 0.0017 5.9E-08 63.2 16.4 158 435-613 44-205 (262)
61 2z2n_A Virginiamycin B lyase; 97.5 0.077 2.6E-06 52.6 28.2 217 363-615 36-260 (299)
62 1l0q_A Surface layer protein; 97.5 0.0077 2.6E-07 62.9 20.9 224 349-613 45-279 (391)
63 2iwa_A Glutamine cyclotransfer 97.4 0.013 4.6E-07 57.5 20.0 155 436-611 23-183 (266)
64 1k8k_C P40, ARP2/3 complex 41 97.4 0.025 8.7E-07 58.2 23.6 240 348-620 20-287 (372)
65 2ovr_B FBW7, F-BOX/WD repeat p 97.4 0.041 1.4E-06 58.6 25.4 213 363-612 139-351 (445)
66 3nok_A Glutaminyl cyclase; bet 97.3 0.0072 2.4E-07 58.9 16.9 154 435-612 56-213 (268)
67 2qc5_A Streptogramin B lactona 97.3 0.11 3.9E-06 51.3 27.0 217 363-615 41-265 (300)
68 3vgz_A Uncharacterized protein 97.3 0.037 1.3E-06 56.5 23.6 221 362-615 68-309 (353)
69 3drx_A BTB/POZ domain-containi 97.3 0.00024 8.4E-09 65.5 5.8 91 95-188 14-110 (202)
70 2ovr_B FBW7, F-BOX/WD repeat p 97.3 0.054 1.9E-06 57.7 25.6 217 363-614 179-396 (445)
71 3jrp_A Fusion protein of prote 97.3 0.019 6.6E-07 59.2 21.4 190 396-610 22-241 (379)
72 4ery_A WD repeat-containing pr 97.2 0.062 2.1E-06 54.0 23.7 228 348-611 35-270 (312)
73 3ow8_A WD repeat-containing pr 97.2 0.045 1.6E-06 55.6 22.4 187 396-612 91-282 (321)
74 1p22_A F-BOX/WD-repeat protein 97.2 0.019 6.5E-07 61.1 19.9 221 349-609 144-365 (435)
75 1ri6_A Putative isomerase YBHE 97.1 0.11 3.8E-06 52.5 24.8 235 363-623 60-324 (343)
76 2z2n_A Virginiamycin B lyase; 97.1 0.18 6E-06 49.9 25.8 194 391-615 19-218 (299)
77 1rwi_B Serine/threonine-protei 97.1 0.028 9.7E-07 55.0 19.4 193 390-613 27-226 (270)
78 3bws_A Protein LP49; two-domai 97.1 0.015 5.1E-07 61.7 18.4 223 364-613 102-338 (433)
79 3v7d_B Cell division control p 97.1 0.22 7.4E-06 53.1 27.7 226 350-614 175-426 (464)
80 1rwi_B Serine/threonine-protei 97.1 0.048 1.6E-06 53.3 20.4 214 363-609 46-264 (270)
81 1q7f_A NHL, brain tumor CG1071 97.1 0.22 7.6E-06 49.0 25.4 195 396-615 40-244 (286)
82 2hqs_A Protein TOLB; TOLB, PAL 97.0 0.092 3.1E-06 55.5 23.6 230 363-617 159-395 (415)
83 3jro_A Fusion protein of prote 97.0 0.014 4.9E-07 67.2 18.6 241 348-619 21-296 (753)
84 4a2l_A BT_4663, two-component 97.0 0.18 6.1E-06 58.4 27.7 238 364-637 378-647 (795)
85 1got_B GT-beta; complex (GTP-b 97.0 0.18 6.1E-06 51.4 24.9 226 348-611 67-303 (340)
86 3ow8_A WD repeat-containing pr 97.0 0.1 3.5E-06 52.9 22.2 210 363-607 102-319 (321)
87 3v9f_A Two-component system se 97.0 0.056 1.9E-06 62.5 22.6 211 363-609 427-656 (781)
88 3scy_A Hypothetical bacterial 97.0 0.22 7.7E-06 51.0 25.2 250 348-620 13-304 (361)
89 1p22_A F-BOX/WD-repeat protein 97.0 0.045 1.5E-06 58.2 20.3 186 396-612 142-328 (435)
90 3v9f_A Two-component system se 96.9 0.085 2.9E-06 60.9 23.8 238 364-637 384-644 (781)
91 1kb0_A Quinohemoprotein alcoho 96.9 0.23 8E-06 56.1 26.7 203 392-611 73-348 (677)
92 4aez_A CDC20, WD repeat-contai 96.9 0.084 2.9E-06 55.3 21.6 227 348-611 146-382 (401)
93 1q7f_A NHL, brain tumor CG1071 96.9 0.39 1.3E-05 47.3 28.7 230 348-608 41-279 (286)
94 3bws_A Protein LP49; two-domai 96.9 0.083 2.9E-06 55.7 21.7 241 347-615 133-396 (433)
95 3vgz_A Uncharacterized protein 96.9 0.44 1.5E-05 48.2 26.5 201 396-619 52-272 (353)
96 2qc5_A Streptogramin B lactona 96.9 0.38 1.3E-05 47.3 25.4 192 391-615 24-223 (300)
97 4ery_A WD repeat-containing pr 96.9 0.12 4.2E-06 51.7 21.8 186 396-612 34-226 (312)
98 1gxr_A ESG1, transducin-like e 96.9 0.081 2.8E-06 53.3 20.5 187 396-613 108-300 (337)
99 2ynn_A Coatomer subunit beta'; 96.8 0.18 6.1E-06 50.5 22.6 225 348-613 25-263 (304)
100 2aq5_A Coronin-1A; WD40 repeat 96.8 0.14 4.7E-06 53.6 22.7 194 396-611 93-301 (402)
101 2ad6_A Methanol dehydrogenase 96.8 0.24 8.1E-06 54.8 25.3 120 392-522 58-194 (571)
102 4aez_A CDC20, WD repeat-contai 96.8 0.16 5.5E-06 53.1 23.1 222 363-616 113-343 (401)
103 2ojh_A Uncharacterized protein 96.8 0.35 1.2E-05 47.2 24.5 230 362-615 21-264 (297)
104 4gqb_B Methylosome protein 50; 96.8 0.062 2.1E-06 55.2 19.3 182 396-609 138-331 (344)
105 4g56_B MGC81050 protein; prote 96.8 0.044 1.5E-06 56.6 18.2 184 396-609 150-343 (357)
106 3mkq_A Coatomer beta'-subunit; 96.8 0.12 3.9E-06 59.9 23.4 228 348-612 25-262 (814)
107 1k8k_C P40, ARP2/3 complex 41 96.8 0.072 2.5E-06 54.7 19.5 192 396-612 19-236 (372)
108 3v7d_B Cell division control p 96.7 0.49 1.7E-05 50.3 26.4 184 396-607 279-463 (464)
109 2pm7_B Protein transport prote 96.7 0.19 6.5E-06 50.1 21.5 196 397-618 67-295 (297)
110 3g4e_A Regucalcin; six bladed 96.7 0.16 5.5E-06 50.7 20.8 211 396-637 24-259 (297)
111 3dwl_C Actin-related protein 2 96.7 0.036 1.2E-06 57.3 16.5 239 348-620 23-292 (377)
112 3vl1_A 26S proteasome regulato 96.7 0.45 1.6E-05 49.6 25.2 188 396-611 108-324 (420)
113 1vyh_C Platelet-activating fac 96.6 0.1 3.5E-06 55.0 20.0 222 349-611 121-371 (410)
114 3bg1_A Protein SEC13 homolog; 96.6 0.055 1.9E-06 54.7 17.2 242 348-622 25-307 (316)
115 2hes_X YDR267CP; beta-propelle 96.6 0.2 6.8E-06 50.9 21.5 237 350-616 26-287 (330)
116 1kv9_A Type II quinohemoprotei 96.6 0.51 1.7E-05 53.2 26.7 118 392-521 62-195 (668)
117 4a2l_A BT_4663, two-component 96.6 0.18 6.2E-06 58.3 23.6 209 364-609 428-659 (795)
118 3fvz_A Peptidyl-glycine alpha- 96.6 0.71 2.4E-05 46.7 29.8 225 363-608 69-321 (329)
119 1yiq_A Quinohemoprotein alcoho 96.6 0.55 1.9E-05 53.1 26.6 118 392-521 66-200 (689)
120 3hfq_A Uncharacterized protein 96.6 0.38 1.3E-05 48.9 23.2 243 351-619 5-282 (347)
121 3fm0_A Protein CIAO1; WDR39,SG 96.6 0.19 6.6E-06 51.3 20.8 180 348-547 28-215 (345)
122 1gxr_A ESG1, transducin-like e 96.5 0.33 1.1E-05 48.7 22.5 214 348-595 109-328 (337)
123 3vl1_A 26S proteasome regulato 96.5 0.49 1.7E-05 49.4 24.0 226 348-609 109-365 (420)
124 3no2_A Uncharacterized protein 96.5 0.76 2.6E-05 45.3 26.4 231 348-615 5-260 (276)
125 1got_B GT-beta; complex (GTP-b 96.5 0.45 1.6E-05 48.3 23.0 186 396-612 66-260 (340)
126 2bkl_A Prolyl endopeptidase; m 96.5 0.62 2.1E-05 52.8 26.3 248 360-615 91-357 (695)
127 2pbi_B Guanine nucleotide-bind 96.5 0.34 1.2E-05 49.7 22.2 226 349-611 77-317 (354)
128 3zwl_B Eukaryotic translation 96.5 0.3 1E-05 49.7 21.6 235 348-611 44-306 (369)
129 3fm0_A Protein CIAO1; WDR39,SG 96.4 0.069 2.4E-06 54.7 16.5 180 396-595 27-216 (345)
130 1jmx_B Amine dehydrogenase; ox 96.4 0.25 8.6E-06 49.9 20.7 152 348-519 11-179 (349)
131 2ad6_A Methanol dehydrogenase 96.4 1.6 5.5E-05 48.0 29.9 121 343-474 58-193 (571)
132 3u4y_A Uncharacterized protein 96.4 0.076 2.6E-06 53.7 16.4 232 348-615 10-258 (331)
133 3azo_A Aminopeptidase; POP fam 96.4 0.46 1.6E-05 53.3 24.3 241 363-615 102-375 (662)
134 1w6s_A Methanol dehydrogenase 96.3 0.43 1.5E-05 52.9 22.9 121 391-522 57-200 (599)
135 1r5m_A SIR4-interacting protei 96.3 0.32 1.1E-05 50.6 21.3 224 348-611 120-363 (425)
136 3dwl_C Actin-related protein 2 96.3 0.017 5.7E-07 60.0 11.0 190 396-611 22-238 (377)
137 2xdw_A Prolyl endopeptidase; a 96.3 0.99 3.4E-05 51.2 26.8 252 349-615 137-422 (710)
138 3jro_A Fusion protein of prote 96.3 0.062 2.1E-06 61.8 16.6 188 396-610 20-239 (753)
139 2p4o_A Hypothetical protein; p 96.3 0.73 2.5E-05 46.1 22.8 219 389-637 34-275 (306)
140 3no2_A Uncharacterized protein 96.3 0.19 6.7E-06 49.6 18.1 209 397-638 5-230 (276)
141 2z3z_A Dipeptidyl aminopeptida 96.3 0.46 1.6E-05 53.8 23.7 191 411-611 234-437 (706)
142 1sq9_A Antiviral protein SKI8; 96.2 0.32 1.1E-05 50.3 20.8 231 350-612 28-325 (397)
143 1r5m_A SIR4-interacting protei 96.2 1.3 4.6E-05 45.7 27.0 188 396-613 119-323 (425)
144 3ei3_B DNA damage-binding prot 96.2 0.13 4.5E-06 53.2 17.6 183 398-610 87-283 (383)
145 2z3z_A Dipeptidyl aminopeptida 96.2 0.37 1.3E-05 54.6 22.6 238 363-616 101-398 (706)
146 2vdu_B TRNA (guanine-N(7)-)-me 96.2 0.62 2.1E-05 49.4 23.2 238 349-613 116-397 (450)
147 1pjx_A Dfpase, DIISOPROPYLFLUO 96.2 0.27 9.4E-06 49.0 19.3 221 363-610 46-300 (314)
148 2xdw_A Prolyl endopeptidase; a 96.2 0.99 3.4E-05 51.2 26.0 248 360-615 95-375 (710)
149 3odt_A Protein DOA1; ubiquitin 96.2 0.42 1.4E-05 47.3 20.5 188 396-615 113-302 (313)
150 3f3f_A Nucleoporin SEH1; struc 96.2 1.2 4E-05 44.5 24.0 189 348-562 23-249 (351)
151 3ott_A Two-component system se 96.1 0.27 9.2E-06 56.5 21.1 211 364-609 393-626 (758)
152 3zwl_B Eukaryotic translation 96.0 0.53 1.8E-05 47.7 20.8 234 349-611 87-348 (369)
153 1vyh_C Platelet-activating fac 96.0 0.22 7.5E-06 52.3 18.1 146 396-566 119-269 (410)
154 1pjx_A Dfpase, DIISOPROPYLFLUO 96.0 0.19 6.6E-06 50.1 16.9 195 396-611 28-258 (314)
155 1flg_A Protein (quinoprotein e 96.0 1.4 4.7E-05 48.7 24.8 117 392-521 64-201 (582)
156 4aow_A Guanine nucleotide-bind 95.9 0.55 1.9E-05 47.1 20.2 227 348-611 98-339 (340)
157 2dg1_A DRP35, lactonase; beta 95.9 0.4 1.4E-05 48.4 19.0 200 396-615 55-269 (333)
158 2hqs_A Protein TOLB; TOLB, PAL 95.9 0.54 1.8E-05 49.5 20.5 202 396-616 143-351 (415)
159 3k26_A Polycomb protein EED; W 95.9 0.46 1.6E-05 48.2 19.6 105 348-470 85-194 (366)
160 1ri6_A Putative isomerase YBHE 95.9 0.95 3.2E-05 45.3 21.7 230 363-619 15-274 (343)
161 1sq9_A Antiviral protein SKI8; 95.9 0.39 1.3E-05 49.6 19.1 109 443-564 197-324 (397)
162 2xbg_A YCF48-like protein; pho 95.8 1.9 6.7E-05 43.4 26.1 220 365-616 58-286 (327)
163 2pbi_B Guanine nucleotide-bind 95.8 0.63 2.1E-05 47.6 19.9 188 396-612 75-274 (354)
164 3u4y_A Uncharacterized protein 95.8 0.38 1.3E-05 48.4 18.0 188 396-612 9-210 (331)
165 3hfq_A Uncharacterized protein 95.7 0.34 1.2E-05 49.2 17.8 187 413-615 19-226 (347)
166 2bkl_A Prolyl endopeptidase; m 95.7 1 3.4E-05 51.1 23.2 244 360-616 144-404 (695)
167 1erj_A Transcriptional repress 95.7 1.2 4E-05 46.3 22.0 187 396-611 134-343 (393)
168 2ynn_A Coatomer subunit beta'; 95.7 0.46 1.6E-05 47.4 18.1 185 396-611 24-219 (304)
169 3g4e_A Regucalcin; six bladed 95.7 0.52 1.8E-05 46.9 18.4 215 348-595 25-264 (297)
170 2hes_X YDR267CP; beta-propelle 95.7 0.19 6.4E-06 51.1 15.3 189 396-609 118-328 (330)
171 2xbg_A YCF48-like protein; pho 95.7 1.1 3.8E-05 45.3 21.1 210 365-607 101-320 (327)
172 3mkq_A Coatomer beta'-subunit; 95.7 0.4 1.4E-05 55.2 19.9 187 396-612 24-220 (814)
173 4e54_B DNA damage-binding prot 95.6 0.071 2.4E-06 56.7 12.4 187 396-610 131-328 (435)
174 3fvz_A Peptidyl-glycine alpha- 95.6 2.1 7.3E-05 43.0 28.1 190 412-615 69-283 (329)
175 2pm7_B Protein transport prote 95.6 0.33 1.1E-05 48.2 16.8 191 396-613 20-244 (297)
176 1nir_A Nitrite reductase; hemo 95.5 0.73 2.5E-05 50.5 20.4 238 347-619 148-417 (543)
177 3odt_A Protein DOA1; ubiquitin 95.5 0.87 3E-05 44.9 19.5 188 395-611 27-216 (313)
178 3e5z_A Putative gluconolactona 95.5 0.96 3.3E-05 44.6 19.7 222 350-612 42-289 (296)
179 2pm9_A Protein WEB1, protein t 95.5 0.3 1E-05 50.9 16.6 147 397-563 178-338 (416)
180 2aq5_A Coronin-1A; WD40 repeat 95.5 0.35 1.2E-05 50.4 17.0 195 398-615 145-348 (402)
181 3bg1_A Protein SEC13 homolog; 95.5 0.22 7.5E-06 50.2 14.8 189 396-609 24-247 (316)
182 2pm9_A Protein WEB1, protein t 95.5 0.6 2E-05 48.5 18.8 237 350-612 27-297 (416)
183 4g56_B MGC81050 protein; prote 95.4 0.22 7.6E-06 51.2 15.0 193 396-611 53-260 (357)
184 2ecf_A Dipeptidyl peptidase IV 95.4 0.37 1.3E-05 55.0 18.2 250 347-615 47-374 (741)
185 1pgu_A Actin interacting prote 95.4 1.1 3.6E-05 49.4 21.6 230 348-614 30-288 (615)
186 4gqb_B Methylosome protein 50; 95.4 0.25 8.4E-06 50.6 15.0 151 439-611 88-248 (344)
187 1s1g_A Potassium voltage-gated 95.4 0.0068 2.3E-07 51.7 2.5 86 94-185 14-105 (124)
188 3scy_A Hypothetical bacterial 95.4 0.75 2.6E-05 46.9 18.8 113 398-515 14-129 (361)
189 2fp8_A Strictosidine synthase; 95.3 1.7 5.9E-05 43.5 21.2 226 363-610 40-314 (322)
190 2ecf_A Dipeptidyl peptidase IV 95.3 1.8 6.1E-05 49.2 23.7 235 363-615 129-421 (741)
191 3kvt_A Potassium channel prote 95.3 0.0027 9.2E-08 53.4 -0.2 84 95-181 7-93 (115)
192 1yfq_A Cell cycle arrest prote 95.3 2.7 9.2E-05 42.0 23.7 229 349-613 24-286 (342)
193 3c5m_A Oligogalacturonate lyas 95.3 0.22 7.4E-06 51.6 14.4 197 411-615 167-390 (396)
194 3k26_A Polycomb protein EED; W 95.3 2.1 7.2E-05 43.1 21.9 138 364-517 45-194 (366)
195 1kv9_A Type II quinohemoprotei 95.3 5 0.00017 45.0 30.6 118 343-474 62-195 (668)
196 1yr2_A Prolyl oligopeptidase; 95.2 5 0.00017 45.6 27.0 247 360-615 130-401 (741)
197 1pby_B Quinohemoprotein amine 95.2 0.57 1.9E-05 46.9 17.1 225 363-613 11-273 (337)
198 2gop_A Trilobed protease; beta 95.2 1.5 5E-05 44.3 20.3 222 362-615 42-297 (347)
199 3c5m_A Oligogalacturonate lyas 95.2 1.1 3.7E-05 46.1 19.5 195 412-619 60-283 (396)
200 1npe_A Nidogen, entactin; glyc 95.2 2.5 8.5E-05 40.9 27.5 195 390-613 39-242 (267)
201 4a11_B DNA excision repair pro 95.2 0.45 1.5E-05 49.2 16.5 216 363-610 122-366 (408)
202 2ojh_A Uncharacterized protein 95.2 0.81 2.8E-05 44.5 17.7 189 410-617 20-214 (297)
203 3pe7_A Oligogalacturonate lyas 95.1 0.67 2.3E-05 47.7 17.7 215 396-619 46-283 (388)
204 4gga_A P55CDC, cell division c 95.1 1.9 6.4E-05 45.1 21.3 219 363-611 125-355 (420)
205 3b7f_A Glycosyl hydrolase, BNR 95.1 1.7 5.8E-05 45.2 20.6 187 413-620 32-274 (394)
206 3i2n_A WD repeat-containing pr 95.0 1.7 5.8E-05 43.7 20.1 226 349-609 32-291 (357)
207 1pex_A Collagenase-3, MMP-13; 95.0 1.7 5.7E-05 40.6 18.0 143 391-565 28-195 (207)
208 2vdu_B TRNA (guanine-N(7)-)-me 95.0 2.1 7.1E-05 45.3 21.5 149 396-566 114-275 (450)
209 3mmy_A MRNA export factor; mRN 95.0 1.7 5.8E-05 43.8 20.1 229 349-613 55-308 (368)
210 4gga_A P55CDC, cell division c 94.9 3.9 0.00013 42.6 23.2 225 348-608 159-394 (420)
211 2ghs_A AGR_C_1268P; regucalcin 94.8 3.8 0.00013 41.1 23.0 188 396-614 60-265 (326)
212 1nn7_A Potassium channel KV4.2 94.8 0.0049 1.7E-07 51.0 -0.0 85 95-185 2-92 (105)
213 3lrv_A PRE-mRNA-splicing facto 94.7 4 0.00014 41.1 23.9 150 443-614 138-299 (343)
214 3b7f_A Glycosyl hydrolase, BNR 94.7 3.6 0.00012 42.6 22.0 233 365-620 33-334 (394)
215 2dg1_A DRP35, lactonase; beta 94.7 3.9 0.00013 40.8 22.1 238 348-608 56-315 (333)
216 3ei3_B DNA damage-binding prot 94.7 0.87 3E-05 46.8 17.1 213 363-609 141-382 (383)
217 1qhu_A Protein (hemopexin); be 94.7 3.3 0.00011 43.8 21.1 212 347-608 158-437 (460)
218 1jmx_B Amine dehydrogenase; ox 94.6 0.58 2E-05 47.2 15.3 153 396-566 10-179 (349)
219 1pgu_A Actin interacting prote 94.6 1.4 4.9E-05 48.3 19.7 190 396-614 29-243 (615)
220 3e5z_A Putative gluconolactona 94.6 2.8 9.6E-05 41.2 20.0 190 397-615 40-252 (296)
221 1yr2_A Prolyl oligopeptidase; 94.6 6 0.0002 45.0 25.2 240 363-617 189-449 (741)
222 1pex_A Collagenase-3, MMP-13; 94.6 2.1 7.2E-05 40.0 17.4 144 438-613 28-196 (207)
223 1t1d_A Protein (potassium chan 94.5 0.013 4.6E-07 47.7 1.9 88 95-185 3-95 (100)
224 3hrp_A Uncharacterized protein 94.5 5.5 0.00019 41.5 24.1 198 390-615 134-360 (409)
225 1nir_A Nitrite reductase; hemo 94.4 0.91 3.1E-05 49.7 17.0 189 396-614 148-360 (543)
226 4aow_A Guanine nucleotide-bind 94.4 1.4 4.7E-05 44.1 17.4 187 396-612 97-289 (340)
227 1qhu_A Protein (hemopexin); be 94.2 1 3.6E-05 47.6 16.1 173 396-609 158-385 (460)
228 1erj_A Transcriptional repress 94.2 0.94 3.2E-05 47.0 16.1 144 443-610 134-288 (393)
229 1kb0_A Quinohemoprotein alcoho 94.2 1.9 6.6E-05 48.5 19.5 118 439-568 73-207 (677)
230 3pe7_A Oligogalacturonate lyas 94.1 1.9 6.5E-05 44.2 18.3 243 363-616 60-336 (388)
231 3iuj_A Prolyl endopeptidase; h 94.1 6.4 0.00022 44.3 23.9 240 362-617 154-413 (693)
232 2p4o_A Hypothetical protein; p 94.1 5.1 0.00017 39.7 21.2 203 363-592 53-277 (306)
233 4a11_B DNA excision repair pro 94.1 0.57 2E-05 48.3 14.1 148 443-612 111-279 (408)
234 3sfz_A APAF-1, apoptotic pepti 94.1 2.8 9.6E-05 50.9 22.2 216 364-611 638-873 (1249)
235 3o4h_A Acylamino-acid-releasin 94.1 1.9 6.4E-05 47.4 19.0 191 396-615 121-320 (582)
236 4ggc_A P55CDC, cell division c 94.0 3.9 0.00013 40.1 19.9 222 363-611 45-275 (318)
237 3iz6_a 40S ribosomal protein R 94.0 1.8 6.2E-05 44.5 17.8 184 398-609 171-375 (380)
238 3i2n_A WD repeat-containing pr 94.0 0.68 2.3E-05 46.7 14.3 186 398-609 32-243 (357)
239 3iuj_A Prolyl endopeptidase; h 94.0 6 0.0002 44.6 23.4 209 396-615 139-365 (693)
240 3sfz_A APAF-1, apoptotic pepti 94.0 0.45 1.5E-05 58.0 14.8 186 396-612 1014-1210(1249)
241 3f3f_A Nucleoporin SEH1; struc 93.9 3.2 0.00011 41.1 19.2 189 396-609 22-249 (351)
242 1yiq_A Quinohemoprotein alcoho 93.9 2.7 9.1E-05 47.5 20.0 118 439-568 66-200 (689)
243 1itv_A MMP9; adaptive molecula 93.8 3.3 0.00011 38.2 17.1 142 391-564 11-176 (195)
244 2nz0_B Potassium voltage-gated 93.8 0.01 3.5E-07 51.7 -0.2 81 94-180 36-121 (140)
245 1qks_A Cytochrome CD1 nitrite 93.6 6.3 0.00022 43.1 21.8 237 347-619 166-436 (567)
246 1yfq_A Cell cycle arrest prote 93.6 3 0.0001 41.6 18.2 176 396-595 22-216 (342)
247 2oiz_A Aromatic amine dehydrog 93.6 7.3 0.00025 39.7 21.5 71 537-617 265-342 (361)
248 1pby_B Quinohemoprotein amine 93.5 1.7 5.8E-05 43.3 16.0 149 398-566 2-167 (337)
249 3dm0_A Maltose-binding peripla 93.5 6.6 0.00023 44.1 22.6 176 363-565 452-635 (694)
250 3azo_A Aminopeptidase; POP fam 93.4 1.2 3.9E-05 50.0 16.1 196 412-616 102-332 (662)
251 2ghs_A AGR_C_1268P; regucalcin 93.4 7 0.00024 39.1 20.8 213 348-594 61-293 (326)
252 3ott_A Two-component system se 93.4 9.1 0.00031 43.6 23.8 183 396-615 73-266 (758)
253 3mmy_A MRNA export factor; mRN 93.4 3.4 0.00012 41.5 18.4 184 397-610 54-248 (368)
254 1itv_A MMP9; adaptive molecula 93.4 2.8 9.4E-05 38.7 15.7 142 438-611 11-176 (195)
255 3lrv_A PRE-mRNA-splicing facto 93.1 3.7 0.00013 41.3 17.9 186 396-611 47-246 (343)
256 2xzm_R RACK1; ribosome, transl 93.0 4.4 0.00015 40.8 18.4 140 349-514 89-243 (343)
257 3dm0_A Maltose-binding peripla 93.0 3.9 0.00013 46.0 19.6 188 396-613 441-636 (694)
258 2gop_A Trilobed protease; beta 92.7 4.2 0.00015 40.7 17.8 186 410-616 41-258 (347)
259 2hz6_A Endoplasmic reticulum t 92.7 0.077 2.6E-06 55.1 4.4 140 396-567 9-156 (369)
260 3frx_A Guanine nucleotide-bind 92.5 7.9 0.00027 38.4 19.3 222 348-609 77-317 (319)
261 4ggc_A P55CDC, cell division c 92.5 8.5 0.00029 37.6 22.4 227 348-608 79-314 (318)
262 2fp8_A Strictosidine synthase; 92.5 6.9 0.00024 38.9 18.8 208 412-637 40-299 (322)
263 1flg_A Protein (quinoprotein e 92.4 15 0.00051 40.3 29.7 119 343-473 64-200 (582)
264 3hxj_A Pyrrolo-quinoline quino 91.9 4.2 0.00014 40.4 16.4 177 394-614 105-290 (330)
265 2xyi_A Probable histone-bindin 91.8 1.7 5.7E-05 45.8 13.7 187 397-609 141-353 (430)
266 1ijq_A LDL receptor, low-densi 91.8 11 0.00039 37.4 27.3 213 364-611 11-240 (316)
267 4e54_B DNA damage-binding prot 91.8 0.77 2.6E-05 48.4 11.0 146 443-611 131-284 (435)
268 2xzm_R RACK1; ribosome, transl 91.6 11 0.00038 37.7 19.3 141 443-608 87-243 (343)
269 1w6s_A Methanol dehydrogenase 91.6 3.1 0.00011 45.9 15.9 119 439-568 58-199 (599)
270 1nr0_A Actin interacting prote 91.6 19 0.00064 39.6 23.9 189 350-568 162-361 (611)
271 3dr2_A Exported gluconolactona 91.6 3.8 0.00013 40.5 15.5 195 396-615 56-273 (305)
272 3dr2_A Exported gluconolactona 91.6 8.2 0.00028 38.0 17.9 185 363-568 67-273 (305)
273 3c75_H MADH, methylamine dehyd 91.5 6.9 0.00023 41.0 17.7 114 348-471 85-212 (426)
274 1qks_A Cytochrome CD1 nitrite 91.5 3.8 0.00013 45.0 16.3 198 397-621 167-389 (567)
275 3iz6_a 40S ribosomal protein R 91.4 12 0.00041 38.2 19.6 178 363-562 180-375 (380)
276 3oyo_A Hemopexin fold protein 91.3 1.5 5.2E-05 41.5 11.3 99 442-561 69-197 (225)
277 1npe_A Nidogen, entactin; glyc 91.1 11 0.00038 36.1 24.4 178 363-566 58-242 (267)
278 3c7x_A Matrix metalloproteinas 91.0 2.4 8.2E-05 39.2 12.0 144 391-564 10-177 (196)
279 4h5i_A Guanine nucleotide-exch 90.9 15 0.00051 37.3 23.0 153 442-612 143-303 (365)
280 3frx_A Guanine nucleotide-bind 90.9 4.9 0.00017 40.0 15.5 143 443-611 76-229 (319)
281 4h5i_A Guanine nucleotide-exch 90.7 16 0.00053 37.1 23.6 189 396-608 144-342 (365)
282 3hrp_A Uncharacterized protein 89.9 20 0.00068 37.2 24.8 192 347-568 141-360 (409)
283 1su3_A Interstitial collagenas 89.8 3.8 0.00013 43.3 13.8 146 391-566 267-436 (450)
284 3o4h_A Acylamino-acid-releasin 89.7 6.8 0.00023 42.8 16.7 190 397-607 75-274 (582)
285 3gre_A Serine/threonine-protei 89.6 20 0.00069 37.0 19.7 148 396-564 181-361 (437)
286 3v65_B Low-density lipoprotein 89.5 21 0.0007 36.7 26.8 214 364-610 97-319 (386)
287 1nr0_A Actin interacting prote 89.5 27 0.00092 38.3 21.6 188 399-615 162-361 (611)
288 3gre_A Serine/threonine-protei 89.5 11 0.00036 39.2 17.5 149 443-611 181-361 (437)
289 1su3_A Interstitial collagenas 89.5 4.5 0.00015 42.7 14.1 144 438-613 267-436 (450)
290 1ijq_A LDL receptor, low-densi 89.5 18 0.00061 35.9 24.9 201 412-638 10-225 (316)
291 1gen_A Gelatinase A; hydrolase 89.2 14 0.00049 34.5 16.5 145 391-564 35-204 (218)
292 3v65_B Low-density lipoprotein 89.2 22 0.00075 36.5 24.2 199 412-639 96-306 (386)
293 1k32_A Tricorn protease; prote 89.0 13 0.00046 44.0 19.6 146 363-522 317-468 (1045)
294 2xyi_A Probable histone-bindin 88.6 6.1 0.00021 41.3 14.7 146 444-609 141-309 (430)
295 3ba0_A Macrophage metalloelast 88.3 16 0.00053 37.4 16.9 148 391-567 185-355 (365)
296 2eqx_A Kelch repeat and BTB do 88.3 0.55 1.9E-05 38.6 4.8 67 157-224 5-83 (105)
297 1k32_A Tricorn protease; prote 88.2 19 0.00064 42.7 20.2 224 363-616 226-468 (1045)
298 1gen_A Gelatinase A; hydrolase 88.0 15 0.0005 34.4 15.2 144 438-611 35-204 (218)
299 3c7x_A Matrix metalloproteinas 88.0 6.4 0.00022 36.2 12.5 143 438-611 10-177 (196)
300 3oyo_A Hemopexin fold protein 87.8 7.1 0.00024 36.8 12.9 139 442-609 12-198 (225)
301 2hz6_A Endoplasmic reticulum t 87.7 0.16 5.6E-06 52.6 1.5 143 440-614 6-156 (369)
302 2mad_H Methylamine dehydrogena 87.4 27 0.00094 35.6 27.1 114 348-472 33-160 (373)
303 3dw8_B Serine/threonine-protei 87.2 29 0.001 35.7 21.8 151 443-615 188-379 (447)
304 3ba0_A Macrophage metalloelast 86.9 19 0.00064 36.8 16.5 145 438-614 185-355 (365)
305 3hxj_A Pyrrolo-quinoline quino 86.9 8.4 0.00029 38.1 14.0 188 363-595 117-315 (330)
306 3v64_C Agrin; beta propeller, 86.6 29 0.00099 35.0 27.8 214 364-611 54-277 (349)
307 3i3n_A Kelch-like protein 11; 86.6 0.32 1.1E-05 48.2 2.8 34 191-224 106-139 (279)
308 2vkp_A BTB/POZ domain-containi 86.4 1.2 4.1E-05 36.6 5.9 33 191-223 76-108 (109)
309 2p9w_A MAL S 1 allergenic prot 86.4 29 0.00098 34.7 19.8 215 363-593 35-304 (334)
310 3hve_A Gigaxonin; ubiquitin, c 85.6 0.3 1E-05 47.6 2.1 34 191-224 98-131 (256)
311 2oiz_A Aromatic amine dehydrog 85.4 29 0.00098 35.1 17.3 115 397-518 16-143 (361)
312 1n7d_A LDL receptor, low-densi 85.1 16 0.00054 41.1 16.3 214 364-614 387-619 (699)
313 3v64_C Agrin; beta propeller, 85.0 34 0.0012 34.4 26.0 201 412-639 53-263 (349)
314 3lp9_A LS-24; SEED albumin, pl 84.9 4.8 0.00016 38.1 10.0 101 441-563 70-202 (227)
315 1fwx_A Nitrous oxide reductase 84.5 19 0.00066 39.1 15.7 258 362-631 111-453 (595)
316 3vu4_A KMHSV2; beta-propeller 84.2 36 0.0012 34.1 21.2 182 396-610 70-272 (355)
317 1hxn_A Hemopexin, HPX; heme, b 84.0 23 0.00079 33.1 14.3 135 442-608 27-196 (219)
318 2oaj_A Protein SNI1; WD40 repe 84.0 69 0.0024 37.1 22.0 188 396-614 28-247 (902)
319 2ymu_A WD-40 repeat protein; u 83.6 46 0.0016 35.7 19.1 172 396-595 396-571 (577)
320 1xfd_A DIP, dipeptidyl aminope 83.1 18 0.00062 40.4 16.0 151 363-521 91-295 (723)
321 1hxn_A Hemopexin, HPX; heme, b 81.0 23 0.00077 33.2 12.9 134 396-561 28-196 (219)
322 2yy9_A Zinc finger and BTB dom 80.7 1.3 4.4E-05 38.2 3.9 37 191-227 86-122 (135)
323 1xfd_A DIP, dipeptidyl aminope 80.3 16 0.00055 40.9 14.1 196 413-615 38-295 (723)
324 2xe4_A Oligopeptidase B; hydro 80.3 66 0.0022 36.3 19.2 199 396-607 185-398 (751)
325 1r29_A B-cell lymphoma 6 prote 78.2 3.1 0.0001 35.2 5.5 33 191-223 94-126 (127)
326 3ju4_A Endo-N-acetylneuraminid 78.1 63 0.0021 32.8 19.3 124 422-545 270-405 (670)
327 3p5b_L Low density lipoprotein 78.0 66 0.0023 33.0 27.4 215 363-610 92-321 (400)
328 3c75_H MADH, methylamine dehyd 77.7 71 0.0024 33.2 17.8 114 397-518 85-212 (426)
329 1jof_A Carboxy-CIS,CIS-muconat 77.7 41 0.0014 33.7 15.2 195 400-612 5-229 (365)
330 3m0c_C LDL receptor, low-densi 77.6 1E+02 0.0035 35.0 29.2 191 389-610 426-633 (791)
331 2ast_A S-phase kinase-associat 77.4 5.5 0.00019 35.3 7.1 76 160-247 49-139 (159)
332 2vpk_A Myoneurin; transcriptio 77.1 3.5 0.00012 34.2 5.4 31 191-221 85-115 (116)
333 1buo_A POZ domain, protein (pr 76.4 5.9 0.0002 33.0 6.7 33 191-223 88-120 (121)
334 3b84_A Zinc finger and BTB dom 76.3 2.7 9.2E-05 35.1 4.5 33 191-223 85-117 (119)
335 2cn3_A Xyloglucanase, beta-1,4 76.0 1.1E+02 0.0037 34.5 29.7 249 372-637 10-319 (737)
336 1n7d_A LDL receptor, low-densi 76.0 35 0.0012 38.3 15.0 198 412-638 386-601 (699)
337 1sqj_A OXG-RCBH, oligoxylogluc 75.8 1.1E+02 0.0039 34.6 29.3 197 413-620 38-280 (789)
338 2q81_A MIZ-1 protein; BTB/POZ 75.5 5.1 0.00017 33.4 6.0 31 191-221 87-117 (119)
339 3vu4_A KMHSV2; beta-propeller 75.4 69 0.0024 31.9 24.8 182 348-563 71-272 (355)
340 3p5b_L Low density lipoprotein 75.1 78 0.0027 32.4 23.1 199 412-638 92-307 (400)
341 2xe4_A Oligopeptidase B; hydro 74.4 1.2E+02 0.004 34.2 22.8 252 348-616 186-465 (751)
342 3m0c_C LDL receptor, low-densi 74.0 1.3E+02 0.0043 34.3 24.1 198 412-638 404-619 (791)
343 1fs1_B SKP1, cyclin A/CDK2-ass 72.4 10 0.00036 32.7 7.4 80 144-225 25-122 (141)
344 2ece_A 462AA long hypothetical 72.2 1E+02 0.0034 32.3 23.2 163 396-568 95-295 (462)
345 3dw8_B Serine/threonine-protei 71.8 52 0.0018 33.7 14.4 103 490-609 188-315 (447)
346 2if5_A Zinc finger and BTB dom 71.1 8.2 0.00028 32.0 6.3 30 191-220 90-119 (120)
347 2z8h_A Transcription regulator 71.0 2.3 7.7E-05 36.7 2.8 34 191-224 100-133 (138)
348 1sqj_A OXG-RCBH, oligoxylogluc 71.0 1.5E+02 0.005 33.7 28.3 242 364-616 38-340 (789)
349 1z68_A Fibroblast activation p 70.2 1.4E+02 0.0047 33.1 19.3 194 412-612 224-446 (719)
350 2qe8_A Uncharacterized protein 69.2 93 0.0032 30.8 18.9 126 390-521 20-161 (343)
351 2ymu_A WD-40 repeat protein; u 67.6 1.3E+02 0.0045 31.9 22.9 210 364-611 326-541 (577)
352 3sjl_D Methylamine dehydrogena 65.6 1.2E+02 0.0042 30.9 20.2 71 537-614 291-368 (386)
353 3lp9_A LS-24; SEED albumin, pl 65.4 21 0.00073 33.5 8.6 101 395-516 71-202 (227)
354 2cn3_A Xyloglucanase, beta-1,4 65.0 1.8E+02 0.0062 32.6 26.8 241 364-615 46-343 (737)
355 2ppi_A Gigaxonin; BTB domain, 65.0 5.8 0.0002 34.4 4.2 30 191-220 114-143 (144)
356 3m5b_A Zinc finger and BTB dom 64.6 7.3 0.00025 32.5 4.6 32 191-222 86-117 (119)
357 2oaj_A Protein SNI1; WD40 repe 63.9 2.1E+02 0.0072 32.9 25.5 187 348-566 29-246 (902)
358 1z68_A Fibroblast activation p 63.6 41 0.0014 37.6 12.2 102 363-474 36-145 (719)
359 3tc9_A Hypothetical hydrolase; 63.4 1.3E+02 0.0043 31.2 15.1 143 396-561 149-300 (430)
360 3sjl_D Methylamine dehydrogena 63.2 1.4E+02 0.0047 30.5 18.0 114 347-471 44-172 (386)
361 1jof_A Carboxy-CIS,CIS-muconat 63.0 1.3E+02 0.0043 30.0 20.7 145 413-567 120-297 (365)
362 2p9w_A MAL S 1 allergenic prot 62.0 1.3E+02 0.0045 29.9 20.7 210 412-638 35-302 (334)
363 4a0p_A LRP6, LRP-6, low-densit 61.8 1.9E+02 0.0065 31.7 27.9 210 363-609 15-237 (628)
364 3a0f_A Xyloglucanase; beta-pro 61.7 2.1E+02 0.0072 32.2 28.9 197 413-620 44-295 (763)
365 2mad_H Methylamine dehydrogena 60.8 1.4E+02 0.0049 30.0 24.0 115 397-519 33-160 (373)
366 3ju4_A Endo-N-acetylneuraminid 60.6 1.5E+02 0.0051 30.2 18.7 130 370-499 267-406 (670)
367 3htm_A Speckle-type POZ protei 60.0 5.3 0.00018 35.7 3.1 35 159-193 131-165 (172)
368 2r9r_B Paddle chimera voltage 57.8 5.5 0.00019 42.9 3.2 85 94-181 53-141 (514)
369 4eoz_A Speckle-type POZ protei 56.0 10 0.00034 32.6 4.2 34 191-224 90-123 (145)
370 1ck7_A Protein (gelatinase A); 55.5 48 0.0016 36.3 10.2 144 391-563 448-616 (631)
371 1mda_H Methylamine dehydrogena 55.3 1.8E+02 0.0061 29.4 17.0 83 537-628 275-363 (368)
372 1ck7_A Protein (gelatinase A); 54.7 52 0.0018 36.1 10.3 143 438-610 448-616 (631)
373 3ga1_A Nucleus accumbens-assoc 54.6 3.9 0.00013 34.7 1.1 33 191-223 95-127 (129)
374 3a0f_A Xyloglucanase; beta-pro 54.3 2.7E+02 0.0094 31.2 26.5 198 364-572 44-294 (763)
375 2qe8_A Uncharacterized protein 52.9 1.5E+02 0.0052 29.2 13.2 127 437-568 20-161 (343)
376 3k6s_A Integrin alpha-X; cell 52.0 65 0.0022 38.2 11.3 176 434-612 334-545 (1095)
377 3sov_A LRP-6, low-density lipo 52.0 1.8E+02 0.0062 28.5 22.6 185 396-612 46-241 (318)
378 2ece_A 462AA long hypothetical 51.8 2.3E+02 0.0078 29.6 19.9 115 443-564 95-239 (462)
379 3ei3_A DNA damage-binding prot 51.6 3.7E+02 0.013 31.9 19.2 137 457-608 862-1000(1158)
380 2oit_A Nucleoporin 214KDA; NH2 51.5 2.2E+02 0.0075 29.3 19.6 116 444-571 162-293 (434)
381 3tc9_A Hypothetical hydrolase; 49.8 76 0.0026 32.9 10.5 142 443-608 149-300 (430)
382 4hvt_A Ritya.17583.B, post-pro 48.4 3.3E+02 0.011 30.4 20.4 210 396-613 140-385 (711)
383 4a0p_A LRP6, LRP-6, low-densit 45.9 3.3E+02 0.011 29.7 24.4 197 412-638 15-224 (628)
384 3hqi_A Speckle-type POZ protei 45.3 11 0.00039 37.3 3.1 35 159-193 271-305 (312)
385 2j04_A TAU60, YPL007P, hypothe 45.2 3.3E+02 0.011 29.5 19.3 174 396-595 96-289 (588)
386 2p1m_A SKP1-like protein 1A; F 42.9 26 0.00088 30.9 4.7 46 192-247 93-138 (160)
387 3k6s_A Integrin alpha-X; cell 42.6 1.5E+02 0.0051 35.1 12.4 176 388-566 335-546 (1095)
388 3qhy_B Beta-lactamase inhibito 42.0 59 0.002 31.6 7.6 133 388-546 72-206 (282)
389 3sov_A LRP-6, low-density lipo 38.6 2.9E+02 0.0099 27.0 20.2 198 412-638 13-225 (318)
390 2oit_A Nucleoporin 214KDA; NH2 37.4 2.4E+02 0.0081 29.0 12.1 60 491-562 162-223 (434)
391 1fwx_A Nitrous oxide reductase 37.1 1.8E+02 0.0063 31.5 11.0 154 444-610 102-309 (595)
392 4hw6_A Hypothetical protein, I 36.9 2.8E+02 0.0097 28.5 12.5 140 444-608 153-303 (433)
393 4a5s_A Dipeptidyl peptidase 4 35.3 3.3E+02 0.011 30.2 13.7 65 412-476 36-109 (740)
394 2ihc_A Transcription regulator 34.1 5.2 0.00018 33.6 -1.4 31 191-221 93-123 (124)
395 3v7d_A Suppressor of kinetocho 32.8 90 0.0031 27.6 6.6 76 160-247 57-146 (169)
396 2j04_B YDR362CP, TAU91; beta p 29.7 2.3E+02 0.0078 30.1 10.5 143 443-610 276-429 (524)
397 3ohu_A Transcription regulator 27.3 5.9 0.0002 33.3 -2.2 29 191-219 96-124 (125)
398 3ei3_A DNA damage-binding prot 26.0 8.8E+02 0.03 28.7 17.8 163 364-539 808-981 (1158)
399 4a5s_A Dipeptidyl peptidase 4 25.5 7.1E+02 0.024 27.4 19.8 67 363-429 36-109 (740)
400 2be1_A Serine/threonine-protei 24.2 2.2E+02 0.0075 28.4 8.4 100 459-569 20-139 (339)
401 4hw6_A Hypothetical protein, I 23.2 6.1E+02 0.021 25.9 23.1 142 397-561 153-303 (433)
402 3qhy_B Beta-lactamase inhibito 22.9 1.7E+02 0.0057 28.2 7.2 96 389-500 112-207 (282)
403 4hvt_A Ritya.17583.B, post-pro 21.8 8.4E+02 0.029 27.0 23.2 148 458-617 268-437 (711)
404 2j04_A TAU60, YPL007P, hypothe 20.4 8.2E+02 0.028 26.3 20.9 163 364-548 108-289 (588)
405 1l9l_A Granulysin; saposin fol 20.3 2.7E+02 0.0091 20.6 7.8 65 178-245 8-72 (74)
406 4gq1_A NUP37; propeller, trans 20.2 3.6E+02 0.012 26.9 9.5 106 490-612 100-221 (393)
No 1
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.9e-49 Score=409.28 Aligned_cols=292 Identities=30% Similarity=0.588 Sum_probs=264.5
Q ss_pred cccCcCC---CceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEE
Q psy14726 340 IARPRVP---HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRC 416 (712)
Q Consensus 340 ~~~pr~~---~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~ 416 (712)
+++||.. .+.||++||... ...+++++||+.+++|..+ .++|.+|..|++++++++||++||..+....+++++
T Consensus 5 ~~~~r~~~~~~~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~--~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 81 (302)
T 2xn4_A 5 RTRLRTPMNLPKLMVVVGGQAP-KAIRSVECYDFKEERWHQV--AELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDS 81 (302)
T ss_dssp ----------CEEEEEECCBSS-SBCCCEEEEETTTTEEEEE--CCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEE
T ss_pred cccCCcccCCCCEEEEECCCCC-CCCCcEEEEcCcCCcEeEc--ccCCcccccceEEEECCEEEEEeCcCCCccccceEE
Confidence 4456654 568999999764 4567899999999999995 578889999999999999999999987777899999
Q ss_pred EECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEE
Q psy14726 417 FNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYIT 496 (712)
Q Consensus 417 yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 496 (712)
||+.+++|..++++|.+|..|++++++++||++||.++...++++++||+.+++|+.++++|.+|..|++++++++||++
T Consensus 82 ~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 161 (302)
T 2xn4_A 82 YDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAV 161 (302)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred ECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEE
Confidence 99999999999999999999999999999999999987777899999999999999999999999999999999999999
Q ss_pred cccCCC--CccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCC
Q psy14726 497 GGFNGH--NCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 574 (712)
Q Consensus 497 GG~~~~--~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 574 (712)
||.++. ..++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+
T Consensus 162 GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~ 241 (302)
T 2xn4_A 162 GGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMC 241 (302)
T ss_dssp CCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred eCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCc
Confidence 998754 358899999999999999999999999999999999999999988777788999999999999999999999
Q ss_pred ccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEcc-CCCCcccceEEEEEcCcc
Q psy14726 575 RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT-DMNIYRSALSACVIMGLP 634 (712)
Q Consensus 575 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~~ 634 (712)
|..|+++.++++||++||.++....+++++||+++++|+.++ .||.+|..|+++++++++
T Consensus 242 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 242 RRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVIDKRL 302 (302)
T ss_dssp CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCCBSCEEEEEEC--
T ss_pred cccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCcccccceEEEecccC
Confidence 999999999999999999988777889999999999999997 899999999999998754
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.4e-48 Score=406.20 Aligned_cols=283 Identities=35% Similarity=0.683 Sum_probs=264.8
Q ss_pred CCCceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeec----CCCCccceEEEEECC
Q psy14726 345 VPHEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGF----DGNEYYNSCRCFNAV 420 (712)
Q Consensus 345 ~~~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~----~~~~~~~~v~~yd~~ 420 (712)
...+.||++||. .....+++++||+.+++|..+ .++|.+|.+|++++++++||++||. .+....+++++||+.
T Consensus 22 ~~~~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~--~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 22 KVGRLIYTAGGY-FRQSLSYLEAYNPSNGTWLRL--ADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp CCCCCEEEECCB-SSSBCCCEEEEETTTTEEEEC--CCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred CCCCEEEEEeCc-CCCCcceEEEEcCCCCeEeEC--CCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCC
Confidence 345789999998 556778899999999999995 5788899999999999999999998 555667899999999
Q ss_pred CCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccC
Q psy14726 421 TKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFN 500 (712)
Q Consensus 421 ~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 500 (712)
+++|+.++++|.+|..|++++++++||++||..+...++++++||+.+++|+.++++|.+|.+|++++++++||++||.+
T Consensus 99 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 178 (308)
T 1zgk_A 99 TNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFD 178 (308)
T ss_dssp TTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred CCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCC
Confidence 99999999999999999999999999999999877778999999999999999999999999999999999999999998
Q ss_pred CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEE
Q psy14726 501 GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAI 580 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 580 (712)
+...++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+|..|++
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 258 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGI 258 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEE
T ss_pred CCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEE
Confidence 77778999999999999999999999999999999999999999988777789999999999999999999999999999
Q ss_pred EEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEEE
Q psy14726 581 EVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVI 630 (712)
Q Consensus 581 ~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 630 (712)
++++++||++||.++....+++++||+++++|+.+++||.+|..|+++++
T Consensus 259 ~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 259 TVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp EEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEC
T ss_pred EEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCCcccceeEeC
Confidence 99999999999998877788999999999999999999999999998864
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1e-48 Score=407.00 Aligned_cols=287 Identities=24% Similarity=0.451 Sum_probs=262.5
Q ss_pred ccCcCC-CceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEEC
Q psy14726 341 ARPRVP-HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNA 419 (712)
Q Consensus 341 ~~pr~~-~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~ 419 (712)
++||.+ .+.||++||... .+++++||+.+++|..+ .++|.+|.+|++++++++||++||.. ....+++++||+
T Consensus 4 ~~pr~~~~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~--~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~ 77 (306)
T 3ii7_A 4 TRPRRKKHDYRIALFGGSQ---PQSCRYFNPKDYSWTDI--RCPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNV 77 (306)
T ss_dssp ------CCCEEEEEECCSS---TTSEEEEETTTTEEEEC--CCCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEET
T ss_pred ccCCccccceEEEEeCCCC---CceEEEecCCCCCEecC--CCCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeC
Confidence 456654 478999999755 67899999999999994 57788999999999999999999987 667899999999
Q ss_pred CCCcEEEeCCCCCCcceeEEEEECCeEEEEcccC-CCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcc
Q psy14726 420 VTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYN-GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGG 498 (712)
Q Consensus 420 ~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 498 (712)
.+++|..++++|.+|..|++++++++||++||.+ +...++++++||+.+++|+.++++|.+|..|++++++++||++||
T Consensus 78 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 157 (306)
T 3ii7_A 78 VKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGG 157 (306)
T ss_dssp TTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECC
T ss_pred CCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECC
Confidence 9999999999999999999999999999999987 556789999999999999999999999999999999999999999
Q ss_pred cCCCCc----cCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCC
Q psy14726 499 FNGHNC----LNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 574 (712)
Q Consensus 499 ~~~~~~----~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 574 (712)
.++... ++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+
T Consensus 158 ~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 237 (306)
T 3ii7_A 158 SLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK 237 (306)
T ss_dssp EESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC
T ss_pred CCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC
Confidence 876544 8999999999999999999999999999999999999999987777788999999999999999999999
Q ss_pred ccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEEEcCc
Q psy14726 575 RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGL 633 (712)
Q Consensus 575 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 633 (712)
|..|++++++++||++||.++....+++++||+++++|+.++++|.+|.+|+++++.+.
T Consensus 238 r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~ 296 (306)
T 3ii7_A 238 GVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCLICVVDT 296 (306)
T ss_dssp BSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTTCEEEEEEC
T ss_pred ccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccccceeEEEEECCc
Confidence 99999999999999999998877888999999999999999999999999999888653
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.4e-48 Score=404.83 Aligned_cols=290 Identities=36% Similarity=0.714 Sum_probs=265.9
Q ss_pred cccCcCC-CceEEEEee-cCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEE
Q psy14726 340 IARPRVP-HEILFAIGG-WSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCF 417 (712)
Q Consensus 340 ~~~pr~~-~~~i~~~GG-~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~y 417 (712)
+++||.. .+.|+++|| .......+++++||+.+++|..+ .++|.+|.+|++++++++||++||..+....+++++|
T Consensus 6 ~~~pr~~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~--~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~ 83 (301)
T 2vpj_A 6 RTRARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFL--PSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECL 83 (301)
T ss_dssp -------CCEEEEEECCEETTTEECCCEEEEETTTTEEEEC--CCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEE
T ss_pred cccccccCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeC--CCCChhhccccEEEECCEEEEEcCCCCCccCceEEEE
Confidence 4567754 468999999 55566778899999999999995 4678899999999999999999999877778999999
Q ss_pred ECCCCc---EEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEE
Q psy14726 418 NAVTKV---WKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIY 494 (712)
Q Consensus 418 d~~~~~---W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 494 (712)
|+.+++ |+.++++|.+|..|++++++++||++||..+...++++++||+.+++|+.++++|.+|..|++++++++||
T Consensus 84 d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 163 (301)
T 2vpj_A 84 DYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIY 163 (301)
T ss_dssp ETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEE
T ss_pred ECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEE
Confidence 999999 99999999999999999999999999999877778999999999999999999999999999999999999
Q ss_pred EEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCC
Q psy14726 495 ITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 574 (712)
Q Consensus 495 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 574 (712)
++||.++...++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+
T Consensus 164 v~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 243 (301)
T 2vpj_A 164 CLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP 243 (301)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred EECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc
Confidence 99999887788999999999999999999999999999999999999999988777789999999999999999999999
Q ss_pred ccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEEEc
Q psy14726 575 RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIM 631 (712)
Q Consensus 575 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 631 (712)
|..|+++.++++||++||.++....+++++||+++++|+.+++||.+|+.|+++++.
T Consensus 244 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 244 RCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLR 300 (301)
T ss_dssp CBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEEESCEEEEEE
T ss_pred ccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCcccccceEEEeC
Confidence 999999999999999999988777889999999999999999999999999999874
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=4.1e-47 Score=396.43 Aligned_cols=280 Identities=22% Similarity=0.392 Sum_probs=254.1
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecC----C--CCccceEEEEECCC
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFD----G--NEYYNSCRCFNAVT 421 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~----~--~~~~~~v~~yd~~~ 421 (712)
+.|+++|| +++++||+.+++|.. +..+.|.+|.+|++++++++||++||.. + ....+++++||+.+
T Consensus 5 ~~l~~~GG-------~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~ 76 (315)
T 4asc_A 5 DLIFMISE-------EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLD 76 (315)
T ss_dssp EEEEEEET-------TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTT
T ss_pred eEEEEEcC-------CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCC
Confidence 57889999 579999999999987 3444567899999999999999999962 1 22346699999999
Q ss_pred CcEEEeCCCCCCcceeEEEEECCeEEEEcccC---CCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcc
Q psy14726 422 KVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYN---GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGG 498 (712)
Q Consensus 422 ~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~---~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 498 (712)
++|+.++++|.+|..|++++++++||++||.+ +....+++++||+.+++|+.++++|.+|.+|++++++++|||+||
T Consensus 77 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 156 (315)
T 4asc_A 77 SEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGG 156 (315)
T ss_dssp TEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred CeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeC
Confidence 99999999999999999999999999999975 356789999999999999999999999999999999999999999
Q ss_pred c-CCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccc
Q psy14726 499 F-NGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSN 577 (712)
Q Consensus 499 ~-~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 577 (712)
. .+...++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++++|.+|..
T Consensus 157 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~ 236 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSS 236 (315)
T ss_dssp BCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccc
Confidence 8 556778999999999999999999999999999999999999999988777788999999999999999999999999
Q ss_pred eEEEEECCEEEEEcccCCC---------ceeeeEEEEECCCCeEEEccCCCCcccceEEEEEcCcceeE
Q psy14726 578 FAIEVIDDMIFAIGGFNGV---------TTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGLPNVY 637 (712)
Q Consensus 578 ~~~~~~~~~i~v~GG~~~~---------~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~~~v~ 637 (712)
|+++.++++||++||.++. ...+++++||+++++|+.+ +|.+|..++++++++++|++
T Consensus 237 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~l~v~ 303 (315)
T 4asc_A 237 LSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV--LREIAYAAGATFLPVRLNVL 303 (315)
T ss_dssp CEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE--ESCSSCCSSCEEEEEEECGG
T ss_pred eeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh--ccCCcCccceEEeCCEEEEE
Confidence 9999999999999998532 3567899999999999999 67789999999999999987
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-46 Score=391.55 Aligned_cols=286 Identities=21% Similarity=0.390 Sum_probs=255.9
Q ss_pred cCcCC---CceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCC------CCccc
Q psy14726 342 RPRVP---HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDG------NEYYN 412 (712)
Q Consensus 342 ~pr~~---~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~------~~~~~ 412 (712)
+||.+ .+.|+++||. .+++||+.+++|... ..+.+.+|.+|++++.+++||++||... ....+
T Consensus 7 ~~r~~~~~~~~i~~~GG~-------~~~~yd~~~~~W~~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~ 78 (318)
T 2woz_A 7 IPRHGMFVKDLILLVNDT-------AAVAYDPMENECYLT-ALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQS 78 (318)
T ss_dssp SCCCCCSEEEEEEEECSS-------EEEEEETTTTEEEEE-EECTTSCSSEEEEECSSSCEEEEESSCC-------CCCB
T ss_pred cccccceecchhhhcccc-------ceEEECCCCCceecc-cCCccCCccceEEEEECCEEEEECCcccCccccCCCccc
Confidence 46665 4689999993 489999999999983 3345578999999999999999999531 12345
Q ss_pred eEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccC--CCCCCceeEEeecCCCceEEcccCCccccceeEEEEC
Q psy14726 413 SCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYN--GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQ 490 (712)
Q Consensus 413 ~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 490 (712)
++++||+.+++|..++++|.+|..|++++++++||++||.. +...++++++||+.+++|+.++++|.+|.+|++++++
T Consensus 79 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 158 (318)
T 2woz_A 79 YFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHN 158 (318)
T ss_dssp EEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEET
T ss_pred cEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEEC
Confidence 69999999999999999999999999999999999999986 4456789999999999999999999999999999999
Q ss_pred CEEEEEcccC-CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC
Q psy14726 491 GKIYITGGFN-GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP 569 (712)
Q Consensus 491 ~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 569 (712)
++|||+||.+ +...++++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+.+++|+.++
T Consensus 159 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 159 GMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp TEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECC
T ss_pred CEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECC
Confidence 9999999984 345689999999999999999999999999999999999999999877666789999999999999999
Q ss_pred CCCCCccceEEEEECCEEEEEcccCCC---------ceeeeEEEEECCCCeEEEccCCCCcccceEEEEEcCcceeE
Q psy14726 570 DMYNPRSNFAIEVIDDMIFAIGGFNGV---------TTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGLPNVY 637 (712)
Q Consensus 570 ~~p~~r~~~~~~~~~~~i~v~GG~~~~---------~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~~~v~ 637 (712)
++|.+|..|+++.++++||++||.+.. ...+++++||+++++|+.+ +|.+|+.|+++++++++|++
T Consensus 239 ~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~iyi~ 313 (318)
T 2woz_A 239 EFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKEIRYASGASCLATRLNLF 313 (318)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESCCGGGTTCEEEEEEEEGG
T ss_pred CCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--cccccccccceeeCCEEEEE
Confidence 999999999999999999999998752 3467899999999999999 88999999999999999986
No 7
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1e-45 Score=384.46 Aligned_cols=293 Identities=29% Similarity=0.496 Sum_probs=255.5
Q ss_pred CCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEccc----CCCCC
Q psy14726 382 DPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGY----NGQRR 457 (712)
Q Consensus 382 ~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~----~~~~~ 457 (712)
+.+.+|..|+++.+++.||++||. .....+++++||+.+++|..++++|.+|..|++++++++||++||. .+...
T Consensus 10 ~~~~~~~~~~~~~~~~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 88 (308)
T 1zgk_A 10 SSGLVPRGSHAPKVGRLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTD 88 (308)
T ss_dssp -----------CCCCCCEEEECCB-SSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEE
T ss_pred cCCeeeCCccccCCCCEEEEEeCc-CCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCee
Confidence 456689999999999999999998 4567889999999999999999999999999999999999999998 44556
Q ss_pred CceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEEC
Q psy14726 458 QNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYH 537 (712)
Q Consensus 458 ~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 537 (712)
.+++++||+.+++|+.++++|.+|..|++++++++|||+||.++...++++++||+.+++|+.++++|.+|..|++++++
T Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 168 (308)
T 1zgk_A 89 SSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLN 168 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred cceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEEC
Confidence 78999999999999999999999999999999999999999987777899999999999999999999999999999999
Q ss_pred CEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccC
Q psy14726 538 ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATD 617 (712)
Q Consensus 538 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 617 (712)
++||++||.++....+++++||+.+++|+.++++|.+|..|+++.++++||++||.++....+++++||+.+++|+.+++
T Consensus 169 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 248 (308)
T 1zgk_A 169 RLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAP 248 (308)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCC
T ss_pred CEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCC
Confidence 99999999887777899999999999999999999999999999999999999999887778899999999999999999
Q ss_pred CCCcccceEEEEEcCcceeEeccccccchhhHHhhhhhhcccccccccccccCCcccccccCccCCCCccccccc
Q psy14726 618 MNIYRSALSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVLPSSNSNVSSSDGVM 692 (712)
Q Consensus 618 ~p~~r~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~w~~~p~~~~~~~~~~~~~ 692 (712)
+|.+|..++++++++++|++++..... ....++ .|++..++|+.++ .|+..|...+.+
T Consensus 249 ~p~~r~~~~~~~~~~~i~v~GG~~~~~---------~~~~v~-------~yd~~~~~W~~~~-~~p~~r~~~~~~ 306 (308)
T 1zgk_A 249 MKHRRSALGITVHQGRIYVLGGYDGHT---------FLDSVE-------CYDPDTDTWSEVT-RMTSGRSGVGVA 306 (308)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCSSC---------BCCEEE-------EEETTTTEEEEEE-ECSSCCBSCEEE
T ss_pred CCCCccceEEEEECCEEEEEcCcCCCc---------ccceEE-------EEcCCCCEEeecC-CCCCCcccceeE
Confidence 999999999999999999996643211 111222 4999999999985 577777776654
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.3e-45 Score=377.61 Aligned_cols=283 Identities=29% Similarity=0.548 Sum_probs=255.0
Q ss_pred EEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceE
Q psy14726 393 AVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWS 472 (712)
Q Consensus 393 ~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 472 (712)
+.+++.||++||.+. ...+++++||+.+++|..++++|.+|..|++++++++||++||.++....+++++||+.+++|+
T Consensus 12 ~~~~~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 90 (302)
T 2xn4_A 12 MNLPKLMVVVGGQAP-KAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWT 90 (302)
T ss_dssp ---CEEEEEECCBSS-SBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEE
T ss_pred cCCCCEEEEECCCCC-CCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCcee
Confidence 345789999999864 4578899999999999999999999999999999999999999987777899999999999999
Q ss_pred EcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCC--
Q psy14726 473 LIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMS-- 550 (712)
Q Consensus 473 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-- 550 (712)
.++++|.+|..|++++++++|||+||.++...++++++||+.+++|+.++++|.+|..|++++++++||++||.++..
T Consensus 91 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 91 SVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQ 170 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTE
T ss_pred eCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCc
Confidence 999999999999999999999999999887788999999999999999999999999999999999999999976543
Q ss_pred ccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEEE
Q psy14726 551 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVI 630 (712)
Q Consensus 551 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 630 (712)
..+++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+++++|+.++++|.+|..++++++
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 250 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV 250 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred cccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE
Confidence 47899999999999999999999999999999999999999998877778999999999999999999999999999999
Q ss_pred cCcceeEeccccccchhhHHhhhhhhcccccccccccccCCcccccccCccCCCCccccccc
Q psy14726 631 MGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVLPSSNSNVSSSDGVM 692 (712)
Q Consensus 631 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~w~~~p~~~~~~~~~~~~~ 692 (712)
++.+|++++..... ....++ .||+..++|+.+|..|+..|.+++++
T Consensus 251 ~~~i~v~GG~~~~~---------~~~~v~-------~yd~~~~~W~~~~~~~~~~r~~~~~~ 296 (302)
T 2xn4_A 251 NGLLYVVGGDDGSC---------NLASVE-------YYNPTTDKWTVVSSCMSTGRSYAGVT 296 (302)
T ss_dssp TTEEEEECCBCSSS---------BCCCEE-------EEETTTTEEEECSSCCSSCCBSCEEE
T ss_pred CCEEEEECCcCCCc---------ccccEE-------EEcCCCCeEEECCcccCcccccceEE
Confidence 99999996653221 112223 49999999999998899999887765
No 9
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=1.9e-45 Score=374.81 Aligned_cols=250 Identities=23% Similarity=0.447 Sum_probs=233.4
Q ss_pred CchhHHHHHHHHHHHHhcCCCccEEEEec--CCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcC------CCCH
Q psy14726 72 DRAMSVQAMQALNEFREKNLLCDATIVLA--DNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP------GVDA 143 (712)
Q Consensus 72 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~--~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~------~~~~ 143 (712)
...|+..+++.|+++++++.+|||+|+|+ +|++|+|||.||+++|+||++||++++.|+.+ .+|.|+ ++++
T Consensus 12 ~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~-~~i~l~~~~~~~~v~~ 90 (279)
T 3i3n_A 12 CSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRS-GRVEMRKWSSEPGPEP 90 (279)
T ss_dssp CTTHHHHHHHHHHHHHHHTTTCCEEEECC----CEEEECHHHHHHHCTTSGGGCCC---------EEECCCCSSTTCSCH
T ss_pred CHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHHHhcCCCccccC-CeEEeccccccCCCCH
Confidence 34688999999999999999999999993 29999999999999999999999999999998 999998 8999
Q ss_pred HHHHHHhhhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhhHHHHHHHHHHcccHHHHHHHHHHHHHH
Q psy14726 144 SVMTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRN 223 (712)
Q Consensus 144 ~~f~~~l~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 223 (712)
++|+.+|+|||||++.++.+++.+++.+|++|+++.|++.|+++|.+.++.+||+.++.+|+.+++.+|.+.|.+||.+|
T Consensus 91 ~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 170 (279)
T 3i3n_A 91 DTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRN 170 (279)
T ss_dssp HHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCccccccCCHHHHHhhccCCCCCCCChhHHHHHHHHHHhcChhhHHHHHHHhhhcccCCCCCHHHHHHhhccCC
Q psy14726 224 FVDVARESEEIVFISEQELEEIISSDELNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHP 303 (712)
Q Consensus 224 f~~l~~~~~~f~~l~~~~l~~ll~~d~L~v~~E~~v~~~v~~W~~~~~~~r~~~~~~ll~~vr~~~l~~~~l~~~v~~~~ 303 (712)
|.++. .+++|.+|+.+.+..||++|.|++.+|.+||+++++|++++++.|.+++.+||++|||++|++++|.+.+.+.+
T Consensus 171 f~~v~-~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~~~~r~~~~~~ll~~VRf~l~~~~~L~~~v~~~~ 249 (279)
T 3i3n_A 171 FHKVI-QDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQMKPTYLTRHVKPER 249 (279)
T ss_dssp HHHHT-TSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTTHHHHTTTHHHHHTTSCGGGSCHHHHHHTTTTSH
T ss_pred HHHHh-cCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHhcCCCCCCHHHHHHHhhccc
Confidence 99999 78899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCchhhHHHHhhhhcc
Q psy14726 304 YVQSTPECRPIIIETFKFLY 323 (712)
Q Consensus 304 ~~~~~~~~~~~~~ea~~~~~ 323 (712)
++..++.|++++.+|++||.
T Consensus 250 l~~~~~~c~~~l~ea~~~~~ 269 (279)
T 3i3n_A 250 LVANNEVCVKLVADAVERHA 269 (279)
T ss_dssp HHHTCHHHHHHHHHHHHHHH
T ss_pred hhcCCHHHHHHHHHHHHhcc
Confidence 99999999999999999984
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=368.41 Aligned_cols=276 Identities=24% Similarity=0.369 Sum_probs=248.0
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
.+.||++||... .+++++||+.+++|..++++|.+|.+|++++++++||++||.+ ....+++++||+.+++|+.++
T Consensus 11 ~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~ 86 (306)
T 3ii7_A 11 HDYRIALFGGSQ---PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKL 86 (306)
T ss_dssp CCEEEEEECCSS---TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEE
T ss_pred cceEEEEeCCCC---CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECC
Confidence 478999999755 6889999999999999999999999999999999999999988 667899999999999999999
Q ss_pred cCCccccceeEEEECCEEEEEcccC-CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCc---
Q psy14726 476 PMNVERSDASATTLQGKIYITGGFN-GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSR--- 551 (712)
Q Consensus 476 ~~p~~r~~~~~~~~~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~--- 551 (712)
++|.+|.+|++++++++|||+||.+ +...++++++||+.+++|+.++++|.+|..|++++++++||++||.++...
T Consensus 87 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 87 GPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCE
T ss_pred CCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCccc
Confidence 9999999999999999999999987 567789999999999999999999999999999999999999999766554
Q ss_pred -cceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEEE
Q psy14726 552 -MCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVI 630 (712)
Q Consensus 552 -~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 630 (712)
.+++++||+.+++|+.++++|.+|..|+++.++++||++||.++....+++++||+.+++|+.++++|.+|..++++++
T Consensus 167 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 246 (306)
T 3ii7_A 167 VLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV 246 (306)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE
T ss_pred ccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE
Confidence 7899999999999999999999999999999999999999998877788999999999999999999999999999999
Q ss_pred cCcceeEeccccccchhhHHhhhhhhcccccccccccccCCcccccccCccCCCCccccccc
Q psy14726 631 MGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVLPSSNSNVSSSDGVM 692 (712)
Q Consensus 631 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~w~~~p~~~~~~~~~~~~~ 692 (712)
++.+|++++...... ...+ ..|++..++|+.++ .++..|..++++
T Consensus 247 ~~~i~v~GG~~~~~~---------~~~~-------~~yd~~~~~W~~~~-~~~~~r~~~~~~ 291 (306)
T 3ii7_A 247 GSIVYVLAGFQGVGR---------LGHI-------LEYNTETDKWVANS-KVRAFPVTSCLI 291 (306)
T ss_dssp TTEEEEEECBCSSSB---------CCEE-------EEEETTTTEEEEEE-EEECCSCTTCEE
T ss_pred CCEEEEEeCcCCCee---------eeeE-------EEEcCCCCeEEeCC-CcccccceeEEE
Confidence 999999977542211 1112 24999999999986 455666665443
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=366.76 Aligned_cols=280 Identities=33% Similarity=0.585 Sum_probs=252.7
Q ss_pred ECCEEEEEee-cCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc---
Q psy14726 395 IGYNIYVIGG-FDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--- 470 (712)
Q Consensus 395 ~~~~lyv~GG-~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--- 470 (712)
+++.||++|| .......+++++||+.+++|..++++|.+|..|+++..+++||++||..+....+++++||+.+++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 5789999999 555667889999999999999999999999999999999999999999877778999999999999
Q ss_pred eEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCC
Q psy14726 471 WSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMS 550 (712)
Q Consensus 471 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 550 (712)
|+.++++|.+|..|++++++++|||+||.++...++++++||+.+++|+.++++|.+|..|++++++++||++||.++..
T Consensus 93 W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 172 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLN 172 (301)
T ss_dssp CEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSC
T ss_pred eEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCc
Confidence 99999999999999999999999999999887778999999999999999999999999999999999999999988777
Q ss_pred ccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEEE
Q psy14726 551 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVI 630 (712)
Q Consensus 551 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 630 (712)
..+++++||+.+++|+.++++|.+|..|+++.++++||++||.++....+++++||+++++|+.++++|.+|..|+++++
T Consensus 173 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 252 (301)
T 2vpj_A 173 ILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL 252 (301)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred ccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE
Confidence 78999999999999999999999999999999999999999998877788999999999999999999999999999999
Q ss_pred cCcceeEeccccccchhhHHhhhhhhcccccccccccccCCcccccccCccCCCCcccccc
Q psy14726 631 MGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVLPSSNSNVSSSDGV 691 (712)
Q Consensus 631 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~w~~~p~~~~~~~~~~~~ 691 (712)
++++|++++..... ....++ .|++..++|+.++ .|+..|...+.
T Consensus 253 ~~~i~v~GG~~~~~---------~~~~v~-------~yd~~~~~W~~~~-~~~~~r~~~~~ 296 (301)
T 2vpj_A 253 RGRLYAIAGYDGNS---------LLSSIE-------CYDPIIDSWEVVT-SMGTQRCDAGV 296 (301)
T ss_dssp TTEEEEECCBCSSS---------BEEEEE-------EEETTTTEEEEEE-EEEEEEESCEE
T ss_pred CCEEEEEcCcCCCc---------ccccEE-------EEcCCCCeEEEcC-CCCcccccceE
Confidence 99999996643221 111223 3899999999986 45666655543
No 12
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=5.3e-45 Score=366.91 Aligned_cols=243 Identities=31% Similarity=0.605 Sum_probs=209.1
Q ss_pred CCchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCC--cCCccceEEcCCCCHHHHHH
Q psy14726 71 IDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLH--DQEKFSLVEIPGVDASVMTS 148 (712)
Q Consensus 71 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~--e~~~~~~i~l~~~~~~~f~~ 148 (712)
.+..|+..+++.|+++++++.+|||+|.| +|++|+|||.||+++|+||++||++++. |+.. ..|.++++++++|+.
T Consensus 10 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~-~~i~l~~v~~~~f~~ 87 (256)
T 3hve_A 10 SDPQHAARLLRALSSFREESRFCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGST-YKIELEGISVMVMRE 87 (256)
T ss_dssp CCTTTHHHHHHHHHTCCC--CCCCEEEEE-TTEEEEECHHHHHTTCHHHHHTC------------CEEECSSCCHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhcCCCcceEEEE-CCEEEechHHHHHHcCHHHHHHhCCCCCcccCCC-CeEEeCCCCHHHHHH
Confidence 34478899999999999999999999999 9999999999999999999999999887 5666 899999999999999
Q ss_pred HhhhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhh
Q psy14726 149 LIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVA 228 (712)
Q Consensus 149 ~l~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~l~ 228 (712)
+|+|||||++.++.+++.+++.+|++|+++.|++.|++||.+.++++||+.++.+|+.|++.+|.+.|.+||.+||.++.
T Consensus 88 ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~ 167 (256)
T 3hve_A 88 ILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRDVS 167 (256)
T ss_dssp HHHHHHHSCCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred HHhhccCCCCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCccccccCCHHHHHhhccCCCCCCCChhHHHHHHHHHHhcChhhHHHHHHHhhhcccCCCCCHHHHHHhhccCCCccCC
Q psy14726 229 RESEEIVFISEQELEEIISSDELNVKSEETVWELIIRWIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQST 308 (712)
Q Consensus 229 ~~~~~f~~l~~~~l~~ll~~d~L~v~~E~~v~~~v~~W~~~~~~~r~~~~~~ll~~vr~~~l~~~~l~~~v~~~~~~~~~ 308 (712)
.+++|.+|+.+.+..||++|.|+|.+|.+||+++++|+++++++|.+++.+||++|||++|++++|.+.+++.+++..+
T Consensus 168 -~~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~~~~R~~~~~~ll~~VRf~~l~~~~l~~~v~~~~l~~~~ 246 (256)
T 3hve_A 168 -STEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHDTEIRKVHMKDVMSALWVSGLDSSYLREQMLNEPLVREI 246 (256)
T ss_dssp -TCHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC--CCSTTTHHHHHHHHHHHTTCC-CHHHHHHTSTTHHHH
T ss_pred -CCcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhcChHHHhh
Confidence 7889999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred -CchhhHHH
Q psy14726 309 -PECRPIII 316 (712)
Q Consensus 309 -~~~~~~~~ 316 (712)
++|++++.
T Consensus 247 ~~~c~~ll~ 255 (256)
T 3hve_A 247 VKECSNIPL 255 (256)
T ss_dssp HCC------
T ss_pred HHHHHHHhh
Confidence 78988764
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.1e-41 Score=353.26 Aligned_cols=277 Identities=18% Similarity=0.284 Sum_probs=234.7
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCC--CCCcceeEEEEECCeEEEEcccC----C--CCCCceeEEeecC
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPM--NFKRCYVSTAVHHDVIYAMGGYN----G--QRRQNSVEKYNYT 467 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~--~~~r~~~~~~~~~~~iyv~GG~~----~--~~~~~~v~~yd~~ 467 (712)
.+.||++|| +++++|||.+++|.. +++ |.+|.+|++++++++||++||.. . ....+++++||+.
T Consensus 4 ~~~l~~~GG-------~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~ 75 (315)
T 4asc_A 4 QDLIFMISE-------EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHL 75 (315)
T ss_dssp EEEEEEEET-------TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETT
T ss_pred ceEEEEEcC-------CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCC
Confidence 467999999 579999999999987 655 45899999999999999999962 1 1234569999999
Q ss_pred CCceEEcccCCccccceeEEEECCEEEEEcccC---CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEc
Q psy14726 468 ENQWSLIAPMNVERSDASATTLQGKIYITGGFN---GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIG 544 (712)
Q Consensus 468 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~---~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 544 (712)
+++|+.++++|.+|.+|++++++++|||+||.+ +...++++++||+.+++|+.++++|.+|.+|++++++++||++|
T Consensus 76 ~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 155 (315)
T 4asc_A 76 DSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIG 155 (315)
T ss_dssp TTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEC
T ss_pred CCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEe
Confidence 999999999999999999999999999999974 35678999999999999999999999999999999999999999
Q ss_pred CC-CCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCccc
Q psy14726 545 GF-NGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRS 623 (712)
Q Consensus 545 G~-~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 623 (712)
|. ++....+++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+++++|+.++++|.+|.
T Consensus 156 G~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 235 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERS 235 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCB
T ss_pred CCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCccc
Confidence 98 55566899999999999999999999999999999999999999999888788899999999999999999999999
Q ss_pred ceEEEEEcCcceeEeccccccchhhHHhhhhhhcccccccccccccCCcccccccCccCCCCccccc
Q psy14726 624 ALSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVLPSSNSNVSSSDG 690 (712)
Q Consensus 624 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~w~~~p~~~~~~~~~~~ 690 (712)
.|+++++++++|++++.......-........-.++ .|++..++|+.+ ++..|...+
T Consensus 236 ~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~-------~yd~~~~~W~~~---~~~~r~~~~ 292 (315)
T 4asc_A 236 SLSLVSLVGTLYAIGGFATLETESGELVPTELNDIW-------RYNEEEKKWEGV---LREIAYAAG 292 (315)
T ss_dssp SCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEE-------EEETTTTEEEEE---ESCSSCCSS
T ss_pred ceeEEEECCEEEEECCccccCcCCccccccccCcEE-------EecCCCChhhhh---ccCCcCccc
Confidence 999999999999997664321000000000111222 499999999998 334444433
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.7e-40 Score=352.85 Aligned_cols=259 Identities=16% Similarity=0.196 Sum_probs=222.5
Q ss_pred cCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECC--CCcEEEeCCCC-CCcceeEEEEECCeEEEEccc-C--
Q psy14726 380 QVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAV--TKVWKEIAPMN-FKRCYVSTAVHHDVIYAMGGY-N-- 453 (712)
Q Consensus 380 ~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~~-~~r~~~~~~~~~~~iyv~GG~-~-- 453 (712)
.+++|.+|.+|++++++++|||+||..+ +++++||+. +++|..++++| .+|..|++++++++|||+||. .
T Consensus 3 l~~lP~~r~~~~~~~~~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~ 78 (357)
T 2uvk_A 3 LPETPVPFKSGTGAIDNDTVYIGLGSAG----TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNS 78 (357)
T ss_dssp SCCCSSCCCSCEEEEETTEEEEECGGGT----TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECT
T ss_pred CCCCCccccceEEEEECCEEEEEeCcCC----CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCC
Confidence 4678889999999999999999999764 479999998 59999999999 899999999999999999998 3
Q ss_pred --CCCCCceeEEeecCCCceEEcccCC-ccccceeEEEECCEEEEEcccCCC----------------------------
Q psy14726 454 --GQRRQNSVEKYNYTENQWSLIAPMN-VERSDASATTLQGKIYITGGFNGH---------------------------- 502 (712)
Q Consensus 454 --~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~---------------------------- 502 (712)
....++++++||+.+++|+.+++++ .+|.+|++++++++|||+||.++.
T Consensus 79 ~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (357)
T 2uvk_A 79 EGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFD 158 (357)
T ss_dssp TSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred CccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcc
Confidence 2245789999999999999999998 999999999999999999998643
Q ss_pred ------CccCceEEeeCCCCeeEEeCCCCCCCcc-eEEEEECCEEEEEcCCCCC-CccceEEEEeC--CCCcEEEcCCCC
Q psy14726 503 ------NCLNSCEVYDPECNQWTLIEPMRHRRSG-VSCIAYHECIYVIGGFNGM-SRMCNGEKYNP--VTKTWSQVPDMY 572 (712)
Q Consensus 503 ------~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~-~~~~~v~~yd~--~~~~W~~~~~~p 572 (712)
..++++++||+.+++|+.++++|.+|.. +++++++++||++||.++. ....++++||+ .+++|+.++++|
T Consensus 159 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~ 238 (357)
T 2uvk_A 159 KKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVS 238 (357)
T ss_dssp SCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSS
T ss_pred ccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCC
Confidence 2468999999999999999999977554 9999999999999996543 34678999986 999999999887
Q ss_pred CC--ccceEEEEECCEEEEEcccCC-----------------CceeeeEEEEECCCCeEEEccCCCCcccceEEEEEcCc
Q psy14726 573 NP--RSNFAIEVIDDMIFAIGGFNG-----------------VTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGL 633 (712)
Q Consensus 573 ~~--r~~~~~~~~~~~i~v~GG~~~-----------------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 633 (712)
.+ |.+|++++++++|||+||.+. ...++++++||+.+++|+.++++|.+|..|++++++++
T Consensus 239 ~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 318 (357)
T 2uvk_A 239 SPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNS 318 (357)
T ss_dssp TTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTE
T ss_pred CCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCE
Confidence 66 557889999999999999643 22346899999999999999999999999999999999
Q ss_pred ceeEecccc
Q psy14726 634 PNVYDYIHQ 642 (712)
Q Consensus 634 ~~v~~~~~~ 642 (712)
+|++++...
T Consensus 319 i~v~GG~~~ 327 (357)
T 2uvk_A 319 LLIIGGETA 327 (357)
T ss_dssp EEEEEEECG
T ss_pred EEEEeeeCC
Confidence 999977654
No 15
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-40 Score=347.40 Aligned_cols=295 Identities=19% Similarity=0.266 Sum_probs=241.5
Q ss_pred CCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeC-CCCCCcceeEEEEECCeEEEEcccCC--C----CC
Q psy14726 385 GPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA-PMNFKRCYVSTAVHHDVIYAMGGYNG--Q----RR 457 (712)
Q Consensus 385 ~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~~~~r~~~~~~~~~~~iyv~GG~~~--~----~~ 457 (712)
.+|.++.. .+.||++||. ++++|||.+++|...+ +.+.+|..|++++.+++||++||... . ..
T Consensus 7 ~~r~~~~~---~~~i~~~GG~-------~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 76 (318)
T 2woz_A 7 IPRHGMFV---KDLILLVNDT-------AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPL 76 (318)
T ss_dssp SCCCCCSE---EEEEEEECSS-------EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CC
T ss_pred ccccccee---cchhhhcccc-------ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCc
Confidence 35554433 4689999993 4899999999998843 23478999999999999999999531 1 12
Q ss_pred CceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccC--CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEE
Q psy14726 458 QNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFN--GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIA 535 (712)
Q Consensus 458 ~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~ 535 (712)
.+++++||+.+++|+.++++|.+|..|++++++++|||+||.+ +...++++++||+.+++|+.++++|.+|.+|++++
T Consensus 77 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 156 (318)
T 2woz_A 77 QSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS 156 (318)
T ss_dssp CBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE
T ss_pred cccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE
Confidence 3459999999999999999999999999999999999999986 45678999999999999999999999999999999
Q ss_pred ECCEEEEEcCCC-CCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEE
Q psy14726 536 YHECIYVIGGFN-GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 536 ~~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 614 (712)
++++||++||.+ +....+++++||+.+++|+.++++|.+|..|++++++++||++||.++....+++++||+++++|+.
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 236 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEV 236 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEE
Confidence 999999999974 3445789999999999999999999999999999999999999999887778899999999999999
Q ss_pred ccCCCCcccceEEEEEcCcceeEeccccccchhhHHhhhhhhcccccccccccccCCcccccccCccCCCCccccccccC
Q psy14726 615 ATDMNIYRSALSACVIMGLPNVYDYIHQHRDSLMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVLPSSNSNVSSSDGVMNN 694 (712)
Q Consensus 615 ~~~~p~~r~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~w~~~p~~~~~~~~~~~~~~~ 694 (712)
++++|.+|..|+++++++++|++++........ .++. .........||+..++|+.+ ++..|...+.+.-
T Consensus 237 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~-----~~~~--~~~~~~v~~yd~~~~~W~~~---~~~~r~~~~~~~~ 306 (318)
T 2woz_A 237 MTEFPQERSSISLVSLAGSLYAIGGFAMIQLES-----KEFA--PTEVNDIWKYEDDKKEWAGM---LKEIRYASGASCL 306 (318)
T ss_dssp CCCCSSCCBSCEEEEETTEEEEECCBCCBC---------CCB--CCBCCCEEEEETTTTEEEEE---ESCCGGGTTCEEE
T ss_pred CCCCCCcccceEEEEECCEEEEECCeeccCCCC-----ceec--cceeeeEEEEeCCCCEehhh---cccccccccceee
Confidence 999999999999999999999996654322100 0000 00011223489999999998 5666766655543
Q ss_pred cccee
Q psy14726 695 ASSMM 699 (712)
Q Consensus 695 ~~~~~ 699 (712)
...++
T Consensus 307 ~~~iy 311 (318)
T 2woz_A 307 ATRLN 311 (318)
T ss_dssp EEEEE
T ss_pred CCEEE
Confidence 33343
No 16
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=5.3e-40 Score=349.06 Aligned_cols=268 Identities=16% Similarity=0.215 Sum_probs=223.3
Q ss_pred CceEEEEeecCCCCCCceEEEEECC--CCcEEEcccCCCC-CCCcceEEEEECCEEEEEeec-C----CCCccceEEEEE
Q psy14726 347 HEILFAIGGWSGGSPTDFVETYDTR--ADRWVKIEQVDPM-GPRAYHGTAVIGYNIYVIGGF-D----GNEYYNSCRCFN 418 (712)
Q Consensus 347 ~~~i~~~GG~~~~~~~~~v~~~d~~--~~~W~~~~~~~~~-~~r~~~~~~~~~~~lyv~GG~-~----~~~~~~~v~~yd 418 (712)
.+.||++||... +++++||+. +++|..+ .++| .+|.+|++++++++|||+||. . .....+++++||
T Consensus 19 ~~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~--~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd 92 (357)
T 2uvk_A 19 NDTVYIGLGSAG----TAWYKLDTQAKDKKWTAL--AAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYN 92 (357)
T ss_dssp TTEEEEECGGGT----TCEEEEETTSSSCCEEEC--CCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEE
T ss_pred CCEEEEEeCcCC----CeEEEEccccCCCCeeEC--CCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEe
Confidence 467999999753 479999998 4999994 5677 799999999999999999998 3 234578999999
Q ss_pred CCCCcEEEeCCCC-CCcceeEEEEECCeEEEEcccCCC----------------------------------CCCceeEE
Q psy14726 419 AVTKVWKEIAPMN-FKRCYVSTAVHHDVIYAMGGYNGQ----------------------------------RRQNSVEK 463 (712)
Q Consensus 419 ~~~~~W~~~~~~~-~~r~~~~~~~~~~~iyv~GG~~~~----------------------------------~~~~~v~~ 463 (712)
+.+++|+.+++++ .+|..|++++.+++|||+||.+.. ..++++++
T Consensus 93 ~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 172 (357)
T 2uvk_A 93 PKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLS 172 (357)
T ss_dssp TTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEE
T ss_pred CCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEE
Confidence 9999999999998 999999999999999999997633 24689999
Q ss_pred eecCCCceEEcccCCccccc-eeEEEECCEEEEEcccCCC-CccCceEEeeC--CCCeeEEeCCCCCC--CcceEEEEEC
Q psy14726 464 YNYTENQWSLIAPMNVERSD-ASATTLQGKIYITGGFNGH-NCLNSCEVYDP--ECNQWTLIEPMRHR--RSGVSCIAYH 537 (712)
Q Consensus 464 yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~-~~~~~v~~yd~--~~~~W~~~~~~p~~--r~~~~~~~~~ 537 (712)
||+.+++|+.++++|.+|.. |++++++++|||+||.++. ...+++++||+ .+++|+.++++|.+ |.+|++++++
T Consensus 173 yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~ 252 (357)
T 2uvk_A 173 FDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISN 252 (357)
T ss_dssp EETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEET
T ss_pred EeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEEC
Confidence 99999999999999977555 9999999999999998643 45788999976 99999999988766 5578899999
Q ss_pred CEEEEEcCCCC-----------------CCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCc-ee
Q psy14726 538 ECIYVIGGFNG-----------------MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVT-TI 599 (712)
Q Consensus 538 ~~iyv~GG~~~-----------------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-~~ 599 (712)
++|||+||.+. .....++++||+.+++|+.++++|.+|..|+++.++++|||+||.+... .+
T Consensus 253 ~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~ 332 (357)
T 2uvk_A 253 DSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAV 332 (357)
T ss_dssp TEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEE
T ss_pred CEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEe
Confidence 99999999532 2234689999999999999999999999999999999999999998655 46
Q ss_pred eeEEEEECCCCeEEEccCCCC
Q psy14726 600 YHVECYDEKTDEWYEATDMNI 620 (712)
Q Consensus 600 ~~v~~yd~~~~~W~~~~~~p~ 620 (712)
+++++|+.++++|....+.|.
T Consensus 333 ~~v~~l~~~~~~~~~~~~~~~ 353 (357)
T 2uvk_A 333 TDSVLITVKDNKVTVQNLEHH 353 (357)
T ss_dssp EEEEEEEC-CCSCEEEC----
T ss_pred eeEEEEEEcCcEeEeeecccc
Confidence 899999999999999877664
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=8.2e-39 Score=366.88 Aligned_cols=327 Identities=14% Similarity=0.112 Sum_probs=262.2
Q ss_pred HHhcChhhHHHHHHHhhhcccCCCCCHHHHHHhhccCCCccCCC---chhhHHH------HhhhhcchhhhhhhcCCCCC
Q psy14726 266 WIDYDPENRKKHIVSLMKNIRLGLLETEFFREKVKHHPYVQSTP---ECRPIII------ETFKFLYDLELIAQIDGEVP 336 (712)
Q Consensus 266 W~~~~~~~r~~~~~~ll~~vr~~~l~~~~l~~~v~~~~~~~~~~---~~~~~~~------ea~~~~~~~~~~~~~~~~~~ 336 (712)
|+.++...|.+.++.++++++|++|.+.+++..+...+.+..++ .|.++.. +..++..
T Consensus 315 ~~~~~e~~R~~~lE~ldE~e~~~l~~~hY~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 381 (695)
T 2zwa_A 315 SADEATKKELLKVEPFDELEEFHLFCHHYVLCHATNYKEFAFTQGFLFDRSISEINLTVDEDYQLLE------------- 381 (695)
T ss_dssp HSCHHHHHHHHHHSCCCCHHHHHHHHHTEEEEEEESCTTCCCCTTTCCCC----CCCEECSSEEEEE-------------
T ss_pred hCCHHHHHHHHhccccchHHHHHHhhccEEEEEEecCCccccCcccCCCCccccccCCCCCceeEec-------------
Confidence 89888888899999999999999888887777677766666655 4444331 1111110
Q ss_pred CCCcccCcCC-----CceEEEEeecCCCCCCceEEEEECCCCcEEEcc-c---CCCCCCCcceEEEEE--CCEEEEEeec
Q psy14726 337 TPEIARPRVP-----HEILFAIGGWSGGSPTDFVETYDTRADRWVKIE-Q---VDPMGPRAYHGTAVI--GYNIYVIGGF 405 (712)
Q Consensus 337 ~~~~~~pr~~-----~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~-~---~~~~~~r~~~~~~~~--~~~lyv~GG~ 405 (712)
.|..+.+|.+ .+.||++||... ...+++++||+.+++|..++ . ..+|.+|.+|+++++ +++|||+||.
T Consensus 382 ~~~~p~rr~g~~~~~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~ 460 (695)
T 2zwa_A 382 CECPINRKFGDVDVAGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGR 460 (695)
T ss_dssp CCCTTCCBSCEEEECSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCB
T ss_pred cCCCCCCceeEEEEECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCC
Confidence 1112223433 467999999877 77788999999999999976 3 248899999999999 9999999998
Q ss_pred CCCC-ccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-CCeEEEEcccCCCCCCceeEEeecCCCceEEccc---CCcc
Q psy14726 406 DGNE-YYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP---MNVE 480 (712)
Q Consensus 406 ~~~~-~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~ 480 (712)
++.. ..+++++||+.+++|+.++++|.+|..|+++++ +++|||+||.+... ++++||+.+++|+.+++ +|.+
T Consensus 461 ~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~ 537 (695)
T 2zwa_A 461 KAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQN 537 (695)
T ss_dssp SSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGGS
T ss_pred CCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCCCCc
Confidence 7644 688999999999999999999999999999997 99999999987654 89999999999999986 8999
Q ss_pred ccceeEEEEC---CEEEEEcccCC--CCccCceEEeeCCCCe------eEEeCCC-CCCCcceEEEEEC-CEEEEEcCCC
Q psy14726 481 RSDASATTLQ---GKIYITGGFNG--HNCLNSCEVYDPECNQ------WTLIEPM-RHRRSGVSCIAYH-ECIYVIGGFN 547 (712)
Q Consensus 481 r~~~~~~~~~---~~iyv~GG~~~--~~~~~~v~~yd~~~~~------W~~~~~~-p~~r~~~~~~~~~-~~iyv~GG~~ 547 (712)
|.+|++++++ ++|||+||.+. ...++++++||+.+++ |+.+.++ +.+|.+|++++++ ++|||+||.+
T Consensus 538 r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~ 617 (695)
T 2zwa_A 538 SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTS 617 (695)
T ss_dssp CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBC
T ss_pred ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCcc
Confidence 9999988887 89999999854 3678999999999999 9999876 5899999999999 9999999976
Q ss_pred CCC---ccceEEEEeCCCCcEEEcCCC-------CCCccceEEEEECC-EEEEEcccC----CCceeeeEEEEECCC
Q psy14726 548 GMS---RMCNGEKYNPVTKTWSQVPDM-------YNPRSNFAIEVIDD-MIFAIGGFN----GVTTIYHVECYDEKT 609 (712)
Q Consensus 548 ~~~---~~~~v~~yd~~~~~W~~~~~~-------p~~r~~~~~~~~~~-~i~v~GG~~----~~~~~~~v~~yd~~~ 609 (712)
... ..+++++||+.+++|+.++-. +..+.+|+++.+++ +|||+||.. -+...+++|.+|..+
T Consensus 618 ~~~~~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 618 PSGLFDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVTNVGLKLIAIA 694 (695)
T ss_dssp SSCCCCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEEECTTSCEEECCCEEEEECC
T ss_pred CCCCCCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCCccCcCccccccceEEEEEEc
Confidence 543 478999999999999976321 12466788888866 999999953 234456788887654
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=5.7e-36 Score=343.29 Aligned_cols=253 Identities=12% Similarity=0.133 Sum_probs=217.5
Q ss_pred CCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeC-C-----CCCCcceeEEEEE--CCeEEEEccc
Q psy14726 381 VDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA-P-----MNFKRCYVSTAVH--HDVIYAMGGY 452 (712)
Q Consensus 381 ~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~-----~~~~r~~~~~~~~--~~~iyv~GG~ 452 (712)
+..|.+|.+++ +++++.||++||..+ ...+++++||+.+++|..++ + +|.+|.+|+++++ +|+|||+||.
T Consensus 383 ~~~p~rr~g~~-~~~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~ 460 (695)
T 2zwa_A 383 ECPINRKFGDV-DVAGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGR 460 (695)
T ss_dssp CCTTCCBSCEE-EECSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCB
T ss_pred CCCCCCceeEE-EEECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCC
Confidence 44555565544 448999999999877 77899999999999999998 5 7899999999999 9999999998
Q ss_pred CCCC-CCceeEEeecCCCceEEcccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCC---CCCC
Q psy14726 453 NGQR-RQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEP---MRHR 527 (712)
Q Consensus 453 ~~~~-~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~ 527 (712)
+... .++++|+||+.+++|+.++++|.+|.+|+++++ +++|||+||.++.. ++++||+.+++|+.+++ +|.+
T Consensus 461 ~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~ 537 (695)
T 2zwa_A 461 KAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQN 537 (695)
T ss_dssp SSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGGS
T ss_pred CCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCCCCc
Confidence 8654 689999999999999999999999999999997 99999999987654 89999999999999986 8999
Q ss_pred CcceEEEEEC---CEEEEEcCCCCC--CccceEEEEeCCCCc------EEEcCCC-CCCccceEEEEEC-CEEEEEcccC
Q psy14726 528 RSGVSCIAYH---ECIYVIGGFNGM--SRMCNGEKYNPVTKT------WSQVPDM-YNPRSNFAIEVID-DMIFAIGGFN 594 (712)
Q Consensus 528 r~~~~~~~~~---~~iyv~GG~~~~--~~~~~v~~yd~~~~~------W~~~~~~-p~~r~~~~~~~~~-~~i~v~GG~~ 594 (712)
|.+|++++++ ++||++||.+.. ...+++++||+.+++ |+.+.++ +.+|.+|++++++ ++|||+||.+
T Consensus 538 r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~ 617 (695)
T 2zwa_A 538 SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTS 617 (695)
T ss_dssp CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBC
T ss_pred ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCcc
Confidence 9999988877 899999997433 567899999999999 9999875 5889999999999 9999999987
Q ss_pred CCc---eeeeEEEEECCCCeEEEccCCCC--------cccceEEEEEcC-cceeEec
Q psy14726 595 GVT---TIYHVECYDEKTDEWYEATDMNI--------YRSALSACVIMG-LPNVYDY 639 (712)
Q Consensus 595 ~~~---~~~~v~~yd~~~~~W~~~~~~p~--------~r~~~~~~~~~~-~~~v~~~ 639 (712)
+.. ..+++++||+.+++|+.+ ++|. .+.+|+++++++ ++|++++
T Consensus 618 ~~~~~~~~~~v~~yd~~t~~W~~~-~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GG 673 (695)
T 2zwa_A 618 PSGLFDRTNSIISLDPLSETLTSI-PISRRIWEDHSLMLAGFSLVSTSMGTIHIIGG 673 (695)
T ss_dssp SSCCCCTTTSEEEEETTTTEEEEC-CCCHHHHHHSCCCCSSCEEECC---CEEEECC
T ss_pred CCCCCCCCCeEEEEECCCCeEEEe-eccccccCCCCccceeeeEEEeCCCEEEEEeC
Confidence 653 467899999999999965 3332 456788888877 8998854
No 19
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=4.5e-35 Score=335.92 Aligned_cols=287 Identities=16% Similarity=0.189 Sum_probs=232.4
Q ss_pred CceEEEEeecCCCC------CCceEEEEECCCCcEEEcccCCCCCCCcce--EEEEE-CCEEEEEeecCCCCccceEEEE
Q psy14726 347 HEILFAIGGWSGGS------PTDFVETYDTRADRWVKIEQVDPMGPRAYH--GTAVI-GYNIYVIGGFDGNEYYNSCRCF 417 (712)
Q Consensus 347 ~~~i~~~GG~~~~~------~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~--~~~~~-~~~lyv~GG~~~~~~~~~v~~y 417 (712)
.+.||++||..... ..+.+++||+.+++|..++ .++.+|..+ +++++ +++||++||.... ++++|
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~--~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~y 270 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT--VTVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLY 270 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE--EEECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc--ccCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEe
Confidence 57899999975422 2346899999999999854 344455444 44544 8999999997543 79999
Q ss_pred ECCCCcEEEeCCCCCCcceeEEEEE-CCeEEEEccc-CCCCCCceeEEeecCCCceEEc-----ccCCccccceeEEEEC
Q psy14726 418 NAVTKVWKEIAPMNFKRCYVSTAVH-HDVIYAMGGY-NGQRRQNSVEKYNYTENQWSLI-----APMNVERSDASATTLQ 490 (712)
Q Consensus 418 d~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~-~~~~~~~~v~~yd~~~~~W~~~-----~~~p~~r~~~~~~~~~ 490 (712)
|+.+++|..+++|+.+|..|+++++ +|+|||+||. ++....+++++||+.+++|+.+ .+|+..|.. +++..+
T Consensus 271 d~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~ 349 (656)
T 1k3i_A 271 DSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSD 349 (656)
T ss_dssp EGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTT
T ss_pred cCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc-ceeecC
Confidence 9999999999999999999999999 9999999994 5555788999999999999997 567777654 666679
Q ss_pred CEEEEEcccCCC----CccCceEEeeCCCCeeEEeCC-CCC------CCcceEEEE---ECCEEEEEcCCCC---CCccc
Q psy14726 491 GKIYITGGFNGH----NCLNSCEVYDPECNQWTLIEP-MRH------RRSGVSCIA---YHECIYVIGGFNG---MSRMC 553 (712)
Q Consensus 491 ~~iyv~GG~~~~----~~~~~v~~yd~~~~~W~~~~~-~p~------~r~~~~~~~---~~~~iyv~GG~~~---~~~~~ 553 (712)
+++|++||.++. ...++++.||+.++.|..... .+. ++..++++. .+++||++||.+. ....+
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~ 429 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT 429 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence 999999998764 357899999999999875432 221 233444443 5899999999642 22344
Q ss_pred ---eEEEEeCCCCcEEEcC--CCCCCccceEEEEE-CCEEEEEcccCC------CceeeeEEEEECCCCeEEEccCCCCc
Q psy14726 554 ---NGEKYNPVTKTWSQVP--DMYNPRSNFAIEVI-DDMIFAIGGFNG------VTTIYHVECYDEKTDEWYEATDMNIY 621 (712)
Q Consensus 554 ---~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~-~~~i~v~GG~~~------~~~~~~v~~yd~~~~~W~~~~~~p~~ 621 (712)
.+++||+.+++|..+. +||.+|..|+++++ +++|||+||.+. .....++++|||.+++|+.++++|.+
T Consensus 430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~ 509 (656)
T 1k3i_A 430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIV 509 (656)
T ss_dssp CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSC
T ss_pred cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCc
Confidence 7899999999999986 89999999999988 999999999763 24467899999999999999999999
Q ss_pred ccceEEEEE--cCcceeEecc
Q psy14726 622 RSALSACVI--MGLPNVYDYI 640 (712)
Q Consensus 622 r~~~~~~~~--~~~~~v~~~~ 640 (712)
|.+|+++++ +++++++++.
T Consensus 510 R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 510 RVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCTTEEEEECTTSCEEEEECC
T ss_pred cccccHhhcCCCcEEEecCCC
Confidence 999999998 9999998764
No 20
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=7.1e-34 Score=326.02 Aligned_cols=308 Identities=14% Similarity=0.157 Sum_probs=237.6
Q ss_pred EEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCC------ccceEEEEECCCCcEEEeCCCCCCcce
Q psy14726 365 VETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNE------YYNSCRCFNAVTKVWKEIAPMNFKRCY 436 (712)
Q Consensus 365 v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~------~~~~v~~yd~~~~~W~~~~~~~~~r~~ 436 (712)
+++||+.+++|..+. ++ ||..++++++ +++||++||..... ....+++||+.+++|..++++|.+|..
T Consensus 168 ~~~~dp~~~~W~~~~--~~--P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~ 243 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTI--DL--PIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDM 243 (656)
T ss_dssp CCCCCTTSCEEEEEE--EC--SSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCC
T ss_pred cccCCCCCCeeeeec--cC--CCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCC
Confidence 567899999999853 33 4566777777 99999999975422 245799999999999999999888766
Q ss_pred eE--EE-EECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CCEEEEEcc-cCCCCccCceEEe
Q psy14726 437 VS--TA-VHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGG-FNGHNCLNSCEVY 511 (712)
Q Consensus 437 ~~--~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG-~~~~~~~~~v~~y 511 (712)
++ ++ ..+|+||++||.... ++++||+.+++|+.+++||.+|.+|+++++ +++|||+|| .++...++++++|
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~y 319 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVY 319 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEE
T ss_pred ccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEe
Confidence 53 34 468999999997643 799999999999999999999999999999 999999999 4556678999999
Q ss_pred eCCCCeeEEe-----CCCCCCCcceEEEEECCEEEEEcCCCCCC----ccceEEEEeCCCCcEEEcCC-CCC------Cc
Q psy14726 512 DPECNQWTLI-----EPMRHRRSGVSCIAYHECIYVIGGFNGMS----RMCNGEKYNPVTKTWSQVPD-MYN------PR 575 (712)
Q Consensus 512 d~~~~~W~~~-----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~v~~yd~~~~~W~~~~~-~p~------~r 575 (712)
|+.+++|+.+ .+++.+|.. +++..++++|++||.++.. ...+++.||+.+++|..... .+. ++
T Consensus 320 d~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~ 398 (656)
T 1k3i_A 320 SPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDA 398 (656)
T ss_dssp ETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCC
T ss_pred CCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCC
Confidence 9999999998 456666554 5556799999999976542 36789999999999876422 221 23
Q ss_pred cceEEEE---ECCEEEEEcccCC---Cceee---eEEEEECCCCeEEEcc--CCCCcccceEEEEE-cCcceeEeccccc
Q psy14726 576 SNFAIEV---IDDMIFAIGGFNG---VTTIY---HVECYDEKTDEWYEAT--DMNIYRSALSACVI-MGLPNVYDYIHQH 643 (712)
Q Consensus 576 ~~~~~~~---~~~~i~v~GG~~~---~~~~~---~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~-~~~~~v~~~~~~~ 643 (712)
..++++. .+++||++||.+. ...++ .+++||+.+++|..+. .||.+|..|+++++ ++++|++++...+
T Consensus 399 ~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~ 478 (656)
T 1k3i_A 399 MCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRG 478 (656)
T ss_dssp BTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBC
T ss_pred CCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccC
Confidence 4455553 4899999999643 22333 7999999999999986 99999999999988 9999999765433
Q ss_pred cchhhHHhhhhhhcccccccccccccCCcccccccCccCCCCccccccc
Q psy14726 644 RDSLMEEKRQKLLAIEGRQRQNQSEEGNSSQQSVLPSSNSNVSSSDGVM 692 (712)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~w~~~p~~~~~~~~~~~~~ 692 (712)
.. .. ....+..++ .||+..++|+.++ .++..|.+.+.+
T Consensus 479 ~~--~~-~~~~~~~v~-------~ydp~t~~W~~~~-~~~~~R~~hs~a 516 (656)
T 1k3i_A 479 IP--FE-DSTPVFTPE-------IYVPEQDTFYKQN-PNSIVRVYHSIS 516 (656)
T ss_dssp CT--TC-CCSBCCCCE-------EEEGGGTEEEECC-CCSSCCCTTEEE
T ss_pred cC--cC-CCCcccceE-------EEcCCCCceeecC-CCCCccccccHh
Confidence 21 00 011122333 4999999999886 467788776533
No 21
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.96 E-value=9.6e-29 Score=232.77 Aligned_cols=150 Identities=23% Similarity=0.357 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhccC
Q psy14726 77 VQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLR 156 (712)
Q Consensus 77 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~ 156 (712)
+.+.+.|.++++++.+|||+|.+ +|++|+|||.||+++|+||++||.+++.|+.. ..|.|+++++++|+.+|+|||+|
T Consensus 19 ~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~-~~i~l~~~~~~~f~~~l~~~Yt~ 96 (172)
T 3htm_A 19 CRLADELGGLWENSRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEESKK-NRVEINDVEPEVFKEMMCFIYTG 96 (172)
T ss_dssp CCHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSCCCGGGT-TEEEECSSCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCCcceEEEE-CCEEEEeeHHHHHHcCHHHHHHHccCccccCC-CeEEecCCCHHHHHHHHHHHhCC
Confidence 46788999999999999999999 99999999999999999999999999999988 99999999999999999999999
Q ss_pred ceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhh
Q psy14726 157 KLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVA 228 (712)
Q Consensus 157 ~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~l~ 228 (712)
++.++.+++.+|+.+|++|+++.|++.|+++|.+.++.+||+.++.+|..|++.+|.+.|.+||.+||.++.
T Consensus 97 ~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v~ 168 (172)
T 3htm_A 97 KAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVL 168 (172)
T ss_dssp CCTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC----
T ss_pred CCCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987
No 22
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.93 E-value=3.3e-26 Score=236.99 Aligned_cols=150 Identities=23% Similarity=0.357 Sum_probs=137.6
Q ss_pred HHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhccC
Q psy14726 77 VQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLR 156 (712)
Q Consensus 77 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~ 156 (712)
+.|.+.|.+|+.++.+|||+|.| +|++|+|||.|||++|+||++||.+++.|+.. .+|.|+++++++|+.+|+||||+
T Consensus 159 ~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~-~~i~l~~~~~~~f~~~L~~iYt~ 236 (312)
T 3hqi_A 159 CRLADELGGLWENSRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEESKK-NRVEINDVEPEVFKEMMCFIYTG 236 (312)
T ss_dssp CCHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTC-----CC-SEEEECSSCHHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHhCCCCCceEEEE-CCEEEeHHHHHHHHcCHHHHHHhccCccccCC-ceEEecCCCHHHHHHHHHhhcCC
Confidence 35789999999999999999999 99999999999999999999999999999998 99999999999999999999999
Q ss_pred ceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhh
Q psy14726 157 KLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVA 228 (712)
Q Consensus 157 ~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~l~ 228 (712)
++.++.+++.+||.+|++|+++.|++.|+++|.+.++.+||..++.+|+.|++.+|.+.|.+||..||.++.
T Consensus 237 ~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~ 308 (312)
T 3hqi_A 237 KAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFINYHATDVL 308 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC----
T ss_pred CCCChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999887
No 23
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.93 E-value=1.1e-26 Score=212.07 Aligned_cols=136 Identities=23% Similarity=0.378 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhccC
Q psy14726 77 VQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLR 156 (712)
Q Consensus 77 ~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~ 156 (712)
+.+.+.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.+++.|+.. ..|.++++++++|+.+|+|||+|
T Consensus 10 ~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~-~~i~l~~~~~~~~~~~l~~~Y~~ 87 (145)
T 4eoz_A 10 CRLADELGGLWENSRFTDCCLCV-AGQEFQAHKAILAARSPVFSAMFEHEMEESKK-NRVEINDVEPEVFKEMMCFIYTG 87 (145)
T ss_dssp CCHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHSSSHHHHH-TEEEECSSCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCCcceEEEE-CCEEEEeehHHHHHcCHHHHHHHcCCCcCCCC-ceEEecCCCHHHHHHHHHhhccC
Confidence 45788999999999999999999 99999999999999999999999999999888 89999999999999999999999
Q ss_pred ceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhhHHHHHHHHHHcccHHHHH
Q psy14726 157 KLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEE 214 (712)
Q Consensus 157 ~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~i~~~A~~~~~~~L~~ 214 (712)
++.++.+++.+++.+|++|+++.|++.|+++|.+.++.+||+.++.+|+.|++.+|.+
T Consensus 88 ~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 88 KAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp CCTTGGGTHHHHHHHHHHTTCHHHHHHHHCC---------------------------
T ss_pred ccCCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999988763
No 24
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.91 E-value=8.4e-25 Score=192.05 Aligned_cols=115 Identities=33% Similarity=0.650 Sum_probs=106.2
Q ss_pred chhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhh
Q psy14726 73 RAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEY 152 (712)
Q Consensus 73 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~ 152 (712)
..|.+.+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.+++.|+.. ..|.++++++++|+.+|+|
T Consensus 6 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~-~~i~l~~~~~~~f~~ll~~ 83 (120)
T 2if5_A 6 PDHSSDILSGLNEQRTQGLLCDVVILV-EGREFPTHRSVLAACSQYFKKLFTSGAVVDQQ-NVYEIDFVSAEALTALMDF 83 (120)
T ss_dssp TTHHHHHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHC-----CC-SEEECCSSCHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhcCCCCCeEEEE-CCEEEeHHHHHHHHhCHHHHHHhcCCccccCC-ceEEeCCCCHHHHHHHHHH
Confidence 467899999999999999999999999 99999999999999999999999999999988 8999999999999999999
Q ss_pred hccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhc
Q psy14726 153 AYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK 189 (712)
Q Consensus 153 ~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 189 (712)
||||++.++.+++.+++.+|++|+++.|++.|++||.
T Consensus 84 ~Yt~~~~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 84 AYTATLTVSTANVGDILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp HHHSCCCCCGGGHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999873
No 25
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.91 E-value=7.3e-25 Score=197.20 Aligned_cols=125 Identities=28% Similarity=0.547 Sum_probs=116.3
Q ss_pred cccCCchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcC-CCCHHHH
Q psy14726 68 FSSIDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP-GVDASVM 146 (712)
Q Consensus 68 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~-~~~~~~f 146 (712)
+......|...+++.|++|++++.+|||+|.+ +|++|+|||.||+++|+||++||.+++.|+ ..|.++ ++++++|
T Consensus 12 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~e~---~~i~l~~~v~~~~~ 87 (138)
T 2z8h_A 12 FAYESSVHSTNVLLSLNDQRKKDVLCDVTVLV-EGQRFRAHRSVLAACSSYFHSRIVGQTDAE---LTVTLPEEVTVKGF 87 (138)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTCCCTT---EEEECCTTSCHHHH
T ss_pred eEecCCchHHHHHHHHHHHHhhCCCcCeEEEE-CCEEEechHHHHHHcCHHHHHHHhcCCCCC---ceEEeCCCCCHHHH
Confidence 44445578899999999999999999999999 899999999999999999999999988763 578995 8999999
Q ss_pred HHHhhhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhh
Q psy14726 147 TSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRN 196 (712)
Q Consensus 147 ~~~l~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n 196 (712)
+.+|+|||||++.++.+++.+|+.+|++|+++.|++.|++||.+.++.+|
T Consensus 88 ~~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~~sn 137 (138)
T 2z8h_A 88 EPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFLDST 137 (138)
T ss_dssp HHHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCSCCC
T ss_pred HHHHHHhcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999999998877
No 26
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.91 E-value=1.5e-24 Score=192.49 Aligned_cols=118 Identities=25% Similarity=0.542 Sum_probs=111.4
Q ss_pred CCchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEc-CCCCHHHHHHH
Q psy14726 71 IDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEI-PGVDASVMTSL 149 (712)
Q Consensus 71 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l-~~~~~~~f~~~ 149 (712)
....|...+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.+++.| .. ..|.| +++++++|+.+
T Consensus 8 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~iLaa~S~~F~~~f~~~~~e-~~-~~i~l~~~~~~~~f~~l 84 (127)
T 1r29_A 8 QFTRHASDVLLNLNRLRSRDILTDVVIVV-SREQFRAHKTVLMACSGLFYSIFTDQLKR-NL-SVINLDPEINPEGFNIL 84 (127)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTSTTTT-TC-SEEECCTTSCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhcCCCCCEEEEE-CCEEEehHHHHHHHhCHHHHHHhcCCccC-CC-CEEEeCCCCCHHHHHHH
Confidence 34467899999999999999999999999 89999999999999999999999999998 56 89999 99999999999
Q ss_pred hhhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhccc
Q psy14726 150 IEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRL 191 (712)
Q Consensus 150 l~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 191 (712)
|+|||||++.++.+++.+|+.+|++|+++.|++.|+++|.++
T Consensus 85 l~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 85 LDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp HHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred HHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999998653
No 27
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.91 E-value=7.9e-25 Score=195.91 Aligned_cols=118 Identities=28% Similarity=0.481 Sum_probs=103.4
Q ss_pred chhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhh
Q psy14726 73 RAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEY 152 (712)
Q Consensus 73 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~ 152 (712)
..|...+++.|++|++++.+|||+|++ +|++|+|||.||+++|+||++||.+++ . .+|.|+++++++|+.+|+|
T Consensus 6 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~----~-~~i~l~~~~~~~f~~lL~f 79 (135)
T 2yy9_A 6 SGHSVRVLQELNKQREKGQYCDATLDV-GGLVFKAHWSVLACCSHFFQRIYGDGT----G-GSVVLPAGFAEIFGLLLDF 79 (135)
T ss_dssp -CHHHHHHHHHHHHHHTTTTCCEEEEE-TTEEEEECHHHHHHHCHHHHHTCC---------CCEEECGGGHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCcceEEEE-CCEEEehHHHHHHHhCHHHHHHHcCCC----C-CeEEeCCCCHHHHHHHHHH
Confidence 367889999999999999999999999 999999999999999999999999876 4 6799999999999999999
Q ss_pred hccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhh
Q psy14726 153 AYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRN 196 (712)
Q Consensus 153 ~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n 196 (712)
||||++.++.+++.+|+.+|++|+++.|++.|++||.+.+...+
T Consensus 80 iYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~~ 123 (135)
T 2yy9_A 80 FYTGHLALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQA 123 (135)
T ss_dssp HHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-------
T ss_pred HhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999988776443
No 28
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.91 E-value=1e-24 Score=190.74 Aligned_cols=112 Identities=30% Similarity=0.508 Sum_probs=104.9
Q ss_pred hhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhh
Q psy14726 74 AMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYA 153 (712)
Q Consensus 74 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~ 153 (712)
.|...+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.+++ + ..|.|+++++++|+.+|+||
T Consensus 6 ~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~----~-~~i~l~~~~~~~f~~ll~~i 79 (119)
T 3b84_A 6 QHSVRVLQELNKQREKGQYCDATLDV-GGLVFKAHWSVLACCSHFFQSLYGDGS----G-GSVVLPAGFAEIFGLLLDFF 79 (119)
T ss_dssp HHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTTT----C-CCEEECGGGHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCcceEEEE-CCEEEEeeHHHHhhcCHHHHHHHCCCC----C-CeEEeCCCCHHHHHHHHHHH
Confidence 67889999999999999999999999 999999999999999999999999866 4 68999999999999999999
Q ss_pred ccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhccc
Q psy14726 154 YLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRL 191 (712)
Q Consensus 154 Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 191 (712)
|||++.++.+++.+|+.+|++|++++|++.|++||.+.
T Consensus 80 Ytg~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 80 YTGHLALTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp HHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred cCCCCccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999998653
No 29
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.91 E-value=1.3e-24 Score=196.47 Aligned_cols=120 Identities=28% Similarity=0.629 Sum_probs=107.4
Q ss_pred cccCCchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCc--CCccceEEcCCCCHHH
Q psy14726 68 FSSIDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHD--QEKFSLVEIPGVDASV 145 (712)
Q Consensus 68 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e--~~~~~~i~l~~~~~~~ 145 (712)
....+..+...+++.|++|++++.+|||+|.+ +|++|+|||.||+++|+||++||.+++.+ +.. ..|.|+++++++
T Consensus 23 ~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~-~~I~l~~v~~~~ 100 (144)
T 2ppi_A 23 MAVSDPQHAARLLRALSSFREESRFCDAHLVL-DGEEIPVQKNILAAASPYIRTKLNYNPPKDDGST-YKIELEGISVMV 100 (144)
T ss_dssp CCCCCTTHHHHHHHHHHHTTC--CCCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHHCC-----CC-CEEECCSSCHHH
T ss_pred eeecCcchHHHHHHHHHHHHhcCCCcceEEEE-CCEEEehHHHHHHHcCHHHHHHHcCCCccccCCC-cEEEeCCCCHHH
Confidence 44455578899999999999999999999999 99999999999999999999999998876 556 789999999999
Q ss_pred HHHHhhhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhc
Q psy14726 146 MTSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK 189 (712)
Q Consensus 146 f~~~l~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 189 (712)
|+.+|+|||||++.++.+++.+|+.+|++|+++.|++.|++||+
T Consensus 101 f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 101 MREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp HHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999874
No 30
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.90 E-value=5.6e-24 Score=186.78 Aligned_cols=114 Identities=21% Similarity=0.446 Sum_probs=106.7
Q ss_pred CCchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHh
Q psy14726 71 IDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLI 150 (712)
Q Consensus 71 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l 150 (712)
....|+..+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.++ . .+|.++++++++|+.+|
T Consensus 7 ~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~-----~-~~i~l~~~~~~~f~~ll 79 (121)
T 1buo_A 7 QNPSHPTGLLCKANQMRLAGTLCDVVIMV-DSQEFHAHRTVLACTSKMFEILFHRN-----S-QHYTLDFLSPKTFQQIL 79 (121)
T ss_dssp CCTTHHHHHHHHHHHHHHHTTTCCEEEEE-SSCEEEECHHHHHHHCHHHHHHTTSC-----C-SEEEECSSCHHHHHHHH
T ss_pred cCcchHHHHHHHHHHHHhcCCCCCEEEEE-CCEEEehhHHHHhhcCHHHHHHHcCC-----C-cEEEeCCCCHHHHHHHH
Confidence 34468899999999999999999999999 89999999999999999999999863 4 68999999999999999
Q ss_pred hhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhccc
Q psy14726 151 EYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRL 191 (712)
Q Consensus 151 ~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 191 (712)
+|||||++.++.+++.+++.+|++|+++.|++.|+++|.+.
T Consensus 80 ~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 80 EYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp HHHHHSCCCCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HhhcCCCcCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999998653
No 31
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.90 E-value=4.8e-24 Score=185.90 Aligned_cols=111 Identities=28% Similarity=0.483 Sum_probs=104.2
Q ss_pred hhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcC--CCCHHHHHHHhh
Q psy14726 74 AMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP--GVDASVMTSLIE 151 (712)
Q Consensus 74 ~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~--~~~~~~f~~~l~ 151 (712)
.|...+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.++ .+ ..|.|+ ++++++|+.+|+
T Consensus 4 ~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~~----~~-~~i~l~~~~~~~~~f~~ll~ 77 (116)
T 2vpk_A 4 HHCEHLLERLNKQREAGFLCDCTIVI-GEFQFKAHRNVLASFSEYFGAIYRST----SE-NNVFLDQSQVKADGFQKLLE 77 (116)
T ss_dssp HHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHTTC----CC-SCEECCTTTCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCCCCcEEEEE-CCEEEeccHHHHhhcCHHHHHHHcCC----CC-CeEEeecCCCCHHHHHHHHH
Confidence 57889999999999999999999999 99999999999999999999999986 24 678887 999999999999
Q ss_pred hhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhcc
Q psy14726 152 YAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 190 (712)
Q Consensus 152 ~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 190 (712)
|||||++.++.+++.+++.+|++|+++.|++.|++||.+
T Consensus 78 ~~Yt~~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (116)
T 2vpk_A 78 FIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCKIKMED 116 (116)
T ss_dssp HHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred HHcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999863
No 32
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.89 E-value=1.8e-24 Score=191.36 Aligned_cols=113 Identities=28% Similarity=0.629 Sum_probs=107.0
Q ss_pred CchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCC-CCHHHHHHHh
Q psy14726 72 DRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPG-VDASVMTSLI 150 (712)
Q Consensus 72 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~-~~~~~f~~~l 150 (712)
+..|...+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.+++.| . ..|.+++ +++++|+.+|
T Consensus 12 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~~f~~~~~e--~-~~i~l~~~~~~~~f~~~l 87 (125)
T 3ohu_A 12 STVHCTNILLGLNDQRKKDILCDVTLIV-ERKEFRAHRAVLAACSEYFWQALVGQTKN--D-LVVSLPEEVTARGFGPLL 87 (125)
T ss_dssp CSSHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTCCCS--S-CEEECCTTCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhcCCccceEEEE-CCEEEechHHHHHHcCHHHHHHhcCCCCC--C-cEEEeCCCCCHHHHHHHH
Confidence 3468899999999999999999999999 99999999999999999999999998877 4 6899998 9999999999
Q ss_pred hhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhh
Q psy14726 151 EYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFI 188 (712)
Q Consensus 151 ~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l 188 (712)
+|||||++.++.+++.+|+.+|++|+++.|++.|++||
T Consensus 88 ~~iYtg~~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 88 QFAYTAKLLLSRENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHTTSEEEECTTTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HhHcCCceEECHHHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 99999999999999999999999999999999998875
No 33
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.89 E-value=4.3e-24 Score=189.85 Aligned_cols=119 Identities=24% Similarity=0.509 Sum_probs=102.4
Q ss_pred cccCCchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcC-CCCHHHH
Q psy14726 68 FSSIDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP-GVDASVM 146 (712)
Q Consensus 68 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~-~~~~~~f 146 (712)
.......+...+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.++ .. .+|.|+ ++++++|
T Consensus 9 ~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~~Hk~vLaa~S~~F~~~f~~~----~~-~~i~l~~~~~~~~f 82 (129)
T 3ga1_A 9 LQMEIPNFGNSILECLNEQRLQGLYCDVSVVV-KGHAFKAHRAVLAASSSYFRDLFNNS----RS-AVVELPAAVQPQSF 82 (129)
T ss_dssp EEEECTTHHHHHHHHHHHHHHTTCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHHHC----CC-SEEECCTTCCHHHH
T ss_pred EEeecCcHHHHHHHHHHHHHhcCCCcceEEEE-CCEEEEehHHHHHHcCHHHHHHHcCC----CC-CEEEECCCCCHHHH
Confidence 33344568889999999999999999999999 99999999999999999999999876 44 789997 8999999
Q ss_pred HHHhhhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccC
Q psy14726 147 TSLIEYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLT 192 (712)
Q Consensus 147 ~~~l~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l 192 (712)
+.+|+|||||++.++.+++.+|+.+|++|+++.|++.|++||.+..
T Consensus 83 ~~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~~ 128 (129)
T 3ga1_A 83 QQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKVS 128 (129)
T ss_dssp HHHHHHHHHSEEECCTTTHHHHHHHHHHTTBTTSSCC---------
T ss_pred HHHHHHHhCCccccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999997643
No 34
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.89 E-value=9.7e-24 Score=184.55 Aligned_cols=110 Identities=32% Similarity=0.611 Sum_probs=103.4
Q ss_pred chhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhh
Q psy14726 73 RAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEY 152 (712)
Q Consensus 73 ~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~ 152 (712)
..|...+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.+ .. ..|.++++++++|+.+|+|
T Consensus 8 ~~h~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~~f~~-----~~-~~i~l~~~~~~~f~~ll~~ 80 (119)
T 2q81_A 8 PQHSQHVLEQLNQQRQLGLLCDCTFVV-DGVHFKAHKAVLAACSEYFKMLFVD-----QK-DVVHLDISNAAGLGQVLEF 80 (119)
T ss_dssp HHHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHCHHHHHHHHH-----CC-SGGGGGGCCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCcceEEEE-CCEEEehhHHHHHHcCHHHHHHHcC-----CC-CEEEeCCCCHHHHHHHHHH
Confidence 367889999999999999999999999 9999999999999999999999986 23 5678889999999999999
Q ss_pred hccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhc
Q psy14726 153 AYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK 189 (712)
Q Consensus 153 ~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 189 (712)
||||++.++.+++.+++.+|++|++++|++.|++||.
T Consensus 81 ~Ytg~~~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 81 MYTAKLSLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999985
No 35
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.89 E-value=4.7e-24 Score=188.02 Aligned_cols=114 Identities=29% Similarity=0.604 Sum_probs=104.1
Q ss_pred CchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcC-CCCHHHHHHHh
Q psy14726 72 DRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIP-GVDASVMTSLI 150 (712)
Q Consensus 72 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~-~~~~~~f~~~l 150 (712)
...|...+++.|+++++++.+|||+|.+ +|++|+|||.|||++|+||++||.+++.|+ ..|.++ ++++++|+.+|
T Consensus 9 ~~~~~~~l~~~l~~l~~~~~~~Dv~l~v-~~~~~~aHk~vLaa~S~yF~~mf~~~~~e~---~~i~l~~~v~~~~f~~lL 84 (124)
T 2ihc_A 9 SSVHSTNVLLSLNDQRKKDVLCDVTIFV-EGQRFRAHRSVLAACSSYFHSRIVGQADGE---LNITLPEEVTVKGFEPLI 84 (124)
T ss_dssp CSSHHHHHHHHHHHHHHHTCSCCEEEEE-TTEEEEECHHHHHHHBHHHHHHHTTC---C---EEEECCTTSCHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHhcCCCcCEEEEE-CCEEEecHHHHHHHcCHHHHHHHcCCCCCC---ceEeecCCcCHHHHHHHH
Confidence 3467889999999999999999999999 899999999999999999999999988763 578894 89999999999
Q ss_pred hhhccCceecChhhHHHHHHHhhhcChHHHHHHHHHhhc
Q psy14726 151 EYAYLRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIK 189 (712)
Q Consensus 151 ~~~Yt~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~ 189 (712)
+|||||++.++.+++.+|+.+|++|+++.|++.|++||.
T Consensus 85 ~~iYtg~~~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 85 QFAYTAKLILSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHHHSEEEEETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HHhcCCCcccCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999875
No 36
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.88 E-value=2.2e-23 Score=179.69 Aligned_cols=105 Identities=23% Similarity=0.457 Sum_probs=92.5
Q ss_pred HHhcCCCccEEEEecCC---cEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhccCceecCh
Q psy14726 86 FREKNLLCDATIVLADN---SHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITE 162 (712)
Q Consensus 86 l~~~~~~~Dv~l~v~~~---~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~i~~ 162 (712)
|++++.+|||+|.++++ ++|+|||.||+++|+||++||.+++.|+. ..|.|+++++++|+.+|+|||||++.++.
T Consensus 2 l~~~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~--~~i~l~~~~~~~f~~~l~~iYt~~~~~~~ 79 (109)
T 2vkp_A 2 MFNNELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK--SEIHIPDVEPAAFLILLKYMYSDEIDLEA 79 (109)
T ss_dssp CTTCCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHHHHC------C--CEEEETTSCHHHHHHHHHHHHHCCCCCCT
T ss_pred cccCCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC--CeEEeCCCCHHHHHHHHHHHcCCCccCCH
Confidence 57889999999999443 89999999999999999999999998876 68999999999999999999999999999
Q ss_pred hhHHHHHHHhhhcChHHHHHHHHHhhcccC
Q psy14726 163 DNVASLLLATDFFCMSKAQDLCCDFIKRLT 192 (712)
Q Consensus 163 ~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l 192 (712)
+++.+++.+|++|+++.|++.|+++|.+++
T Consensus 80 ~~~~~ll~~A~~~~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 80 DTVLATLYAAKKYIVPALAKACVNFLETSL 109 (109)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHhhC
Confidence 999999999999999999999999987653
No 37
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.87 E-value=2.8e-22 Score=174.04 Aligned_cols=109 Identities=28% Similarity=0.520 Sum_probs=100.8
Q ss_pred CcccCCchhHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHH
Q psy14726 67 NFSSIDRAMSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVM 146 (712)
Q Consensus 67 ~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f 146 (712)
.....+..+...+++.|+++++++.+|||+|.+ +|++|+|||.||+++|+||++||.++ . ..|.++++++++|
T Consensus 6 ~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~~F~~~f~~~-----~-~~i~l~~~~~~~f 78 (116)
T 3fkc_A 6 LISATDIQYSGSLLNSLNEQRGHGLFCDVTVIV-EDRKFRAHKNILSASSTYFHQLFSVA-----G-QVVELSFIRAEIF 78 (116)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEE-TTEEEEECHHHHHHHCHHHHHHTTSC-----C-SEEEECSSCHHHH
T ss_pred eeeecCccHHHHHHHHHHHHHhcCCceeEEEEE-CCEEEehhHHHHHHcCHHHHHHHcCC-----C-CEEEeCCCCHHHH
Confidence 344455678899999999999999999999999 99999999999999999999999874 4 6899999999999
Q ss_pred HHHhhhhccCce-ecChhhHHHHHHHhhhcChHHHHH
Q psy14726 147 TSLIEYAYLRKL-HITEDNVASLLLATDFFCMSKAQD 182 (712)
Q Consensus 147 ~~~l~~~Yt~~~-~i~~~~~~~ll~~A~~~~i~~L~~ 182 (712)
+.+|+|||||++ .++.+++.+++.+|++|+++.|++
T Consensus 79 ~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 79 AEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred HHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccccCc
Confidence 999999999999 799999999999999999999875
No 38
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.85 E-value=4.8e-22 Score=172.85 Aligned_cols=103 Identities=18% Similarity=0.298 Sum_probs=92.8
Q ss_pred hHHHHHHHHHHHHhcCCCccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhc
Q psy14726 75 MSVQAMQALNEFREKNLLCDATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAY 154 (712)
Q Consensus 75 ~~~~l~~~l~~l~~~~~~~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Y 154 (712)
++..+++.|+ +.++.+|||+|.| +|++|+|||.|||++|+||++ .+ ..|.|+++++++|+.+|+|||
T Consensus 15 ~~~~~l~~l~--r~~~~~~Dv~l~v-~~~~f~aHk~vLaa~S~yF~~---------~~-~~i~l~~v~~~~f~~ll~fiY 81 (119)
T 3m5b_A 15 GSDRLVQLAA--RLRPALCDTLITV-GSQEFPAHSLVLAGVSQQLGR---------RG-QWALGEGISPSTFAQLLNFVY 81 (119)
T ss_dssp TTCHHHHHHH--HHTTTTCCEEEEE-TTEEEEECHHHHHTTCGGGCC---------CE-EEECCSSCCHHHHHHHHHHHT
T ss_pred chHHHHHHHH--HhcCCCcceEEEE-CCEEEeeEHHHHHHcCHHHhc---------CC-CEEEeCCCCHHHHHHHHHHHc
Confidence 3456677775 6789999999999 999999999999999999985 34 689999999999999999999
Q ss_pred cCceecChhhHHHHHHHhhhcChHHHHHHHHHhhcc
Q psy14726 155 LRKLHITEDNVASLLLATDFFCMSKAQDLCCDFIKR 190 (712)
Q Consensus 155 t~~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 190 (712)
||++.++.+++.+++.+|++|+++.|++.|++++..
T Consensus 82 tg~~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 82 GESVELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp TCCEEECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 999999999999999999999999999999998765
No 39
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.70 E-value=1.5e-17 Score=140.61 Aligned_cols=96 Identities=20% Similarity=0.328 Sum_probs=91.9
Q ss_pred hcccCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhhcCccccccCCHHHHHhhccCCCCCCCChhHHHHHHHHHH
Q psy14726 188 IKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIISSDELNVKSEETVWELIIRWI 267 (712)
Q Consensus 188 l~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~l~~~~~~f~~l~~~~l~~ll~~d~L~v~~E~~v~~~v~~W~ 267 (712)
+.++++++||+.++.+|+.|++.+|.+.|.+||.+||.++. .+++|++|+.+.|..||++| +.+|.+||+++++|+
T Consensus 4 ~~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~-~~~eFl~L~~~~L~~lL~sd---v~~E~~vf~av~~Wv 79 (105)
T 2eqx_A 4 GSSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQ-NTEEFLHLPHRLLTDIISDG---VPCSQNPTEAIEAWI 79 (105)
T ss_dssp CCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHH-TSHHHHHSCHHHHHHHHHTC---EETTSCHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH-hcccHhhCCHHHHHHHHcCC---CCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999 78899999999999999997 788999999999999
Q ss_pred hcChhhHHHHHHHhhhcccC
Q psy14726 268 DYDPENRKKHIVSLMKNIRL 287 (712)
Q Consensus 268 ~~~~~~r~~~~~~ll~~vr~ 287 (712)
++++++|.+++++||++||+
T Consensus 80 ~~d~~~R~~~~~~Ll~~VR~ 99 (105)
T 2eqx_A 80 NFNKEEREAFAESLRTSLKE 99 (105)
T ss_dssp HTTHHHHHHHHHHHHHHCCE
T ss_pred HcCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999996
No 40
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.55 E-value=6.9e-15 Score=134.35 Aligned_cols=105 Identities=16% Similarity=0.358 Sum_probs=87.0
Q ss_pred EEEEecCCcEEeceeeeecccCHHHHHhhcC-CCC-cCCccceEEcCCCCHHHHHHHhhhhccCc---------------
Q psy14726 95 ATIVLADNSHFPIHRNILCACSDYFRALFTT-SLH-DQEKFSLVEIPGVDASVMTSLIEYAYLRK--------------- 157 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~-~~~-e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~--------------- 157 (712)
|+|+..||++|.|||.+ |+.|+||++||.+ ++. |+.+ ..|.|++++..+++.+++|+|+..
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~-~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~ 80 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDD-DPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKR 80 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHHHTTSSCSS-------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHHHHHhcCCcccccC-CCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccc
Confidence 78887799999999999 8999999999998 777 6777 789999999999999999999987
Q ss_pred -----------eecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhhHHHHH
Q psy14726 158 -----------LHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGIL 201 (712)
Q Consensus 158 -----------~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~i~ 201 (712)
+.++.+++.+|+.||++|+|..|+++|++++...+...++-+|.
T Consensus 81 ~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir 135 (159)
T 2ast_A 81 TDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIR 135 (159)
T ss_dssp CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHH
T ss_pred hhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 67888899999999999999999999999986665555544333
No 41
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.35 E-value=1.2e-12 Score=108.50 Aligned_cols=81 Identities=17% Similarity=0.336 Sum_probs=68.4
Q ss_pred EEEEecCCcEEeceeeeecccCHHHHHhhcC--CCCcCCccceEEcCCCCHHHHHHHhhhhc-----c---Ccee---cC
Q psy14726 95 ATIVLADNSHFPIHRNILCACSDYFRALFTT--SLHDQEKFSLVEIPGVDASVMTSLIEYAY-----L---RKLH---IT 161 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~--~~~e~~~~~~i~l~~~~~~~f~~~l~~~Y-----t---~~~~---i~ 161 (712)
|+|+..||++|.|||.+ |+.|+||++||.+ ++.|+.. ..|.|+++++.+++.+++|+| + +++. ++
T Consensus 4 v~L~SsDg~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~-~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~ 81 (97)
T 4ajy_C 4 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENET-NEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 81 (97)
T ss_dssp EEEECTTCCEEEEEHHH-HTTSHHHHHHHCCC---------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCC
T ss_pred EEEEecCCcEEEecHHH-HHHhHHHHHHHHhCCCccccCC-CceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCC
Confidence 77888899999999999 9999999999987 6777777 899999999999999999999 4 6776 89
Q ss_pred hhhHHHHHHHhhhcCh
Q psy14726 162 EDNVASLLLATDFFCM 177 (712)
Q Consensus 162 ~~~~~~ll~~A~~~~i 177 (712)
.+++.+|+.||++|++
T Consensus 82 ~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 82 PEIALELLMAANFLDC 97 (97)
T ss_dssp GGGHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhhhCC
Confidence 9999999999999873
No 42
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.27 E-value=6.1e-12 Score=111.94 Aligned_cols=102 Identities=17% Similarity=0.308 Sum_probs=85.0
Q ss_pred EEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhccCc-----------------
Q psy14726 95 ATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRK----------------- 157 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~----------------- 157 (712)
|+|+..||++|.+||.+ |..|.+|++||...- . ..|.|++++..+++.+++|+|+..
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~----~-~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 77 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKTMLEDLG----M-DPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTD 77 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHHHHHHTC----C-SSEECTTCCHHHHHHHHHHHHHHTTCC--------------
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcC----C-CceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchh
Confidence 78888899999999998 889999999998631 4 679999999999999999998755
Q ss_pred ---------eecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCChhhHHHHHH
Q psy14726 158 ---------LHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTTPRNCFGILL 202 (712)
Q Consensus 158 ---------~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~~~n~~~i~~ 202 (712)
+.++.+++.+|+.||++|+|..|.++|++++...+...++-+|..
T Consensus 78 ~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeiR~ 131 (141)
T 1fs1_B 78 DIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRK 131 (141)
T ss_dssp ---HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred hhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 567778888888888888888888888888877766666555443
No 43
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=99.16 E-value=4.7e-12 Score=115.35 Aligned_cols=108 Identities=18% Similarity=0.350 Sum_probs=59.8
Q ss_pred EEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhccCc-----------------
Q psy14726 95 ATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRK----------------- 157 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~----------------- 157 (712)
|+|+..||++|.+|+.+ |..|++|++||.... .. ..|.|++++..+++.+++|+|+..
T Consensus 6 v~L~SsDg~~f~v~~~v-A~~S~~ik~ml~~~~---~~-~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~ 80 (160)
T 2p1m_A 6 IVLKSSDGESFEVEEAV-ALESQTIAHMVEDDC---VD-NGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSD 80 (160)
T ss_dssp --CCC---------CHH-HHTCTTTC----------------CCTTSCHHHHHHHHHC----------------------
T ss_pred EEEEcCCCCEEEECHHH-HHHhHHHHHHHHccC---CC-CceeCCcCcHHHHHHHHHHHHHcccCCCccccccccccccc
Confidence 77777799999999998 889999999998742 33 579999999999999999999865
Q ss_pred ----------eecChhhHHHHHHHhhhcChHHHHHHHHHhhcccC---ChhhHHHHHHHHHHc
Q psy14726 158 ----------LHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLT---TPRNCFGILLFSRDH 207 (712)
Q Consensus 158 ----------~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l---~~~n~~~i~~~A~~~ 207 (712)
+.++.+++.+|+.||++|+|..|.++|++++...+ +++.+..++.++..+
T Consensus 81 ~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ikgkt~eeir~~f~I~nd~ 143 (160)
T 2p1m_A 81 DDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDF 143 (160)
T ss_dssp --------------------CHHHHHHTTCHHHHHHHHHHHHHTTTTCCHHHHHHHTTCCCCC
T ss_pred chhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCC
Confidence 35778899999999999999999999999998888 555555554444433
No 44
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.69 E-value=2.5e-08 Score=82.27 Aligned_cols=81 Identities=22% Similarity=0.406 Sum_probs=68.5
Q ss_pred cEEEEecCCcEEeceeeeecccCHHHHHhhcCCCCcCCccceEEcCCCCHHHHHHHhhhhccCc--------------ee
Q psy14726 94 DATIVLADNSHFPIHRNILCACSDYFRALFTTSLHDQEKFSLVEIPGVDASVMTSLIEYAYLRK--------------LH 159 (712)
Q Consensus 94 Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~--------------~~ 159 (712)
-|+|+..||++|.+++.+ |..|.+++.||..++ |... ..|.|++++..+++.+++|+|... -.
T Consensus 5 ~v~L~SsDg~~f~V~~~v-A~~S~~ik~ml~~~~-e~~~-~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~ 81 (99)
T 1hv2_A 5 FVTLVSKDDKEYEISRSA-AMISPTLKAMIEGPF-RESK-GRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFE 81 (99)
T ss_dssp EEEEEETTTEEEEEEHHH-HTTCHHHHHHHHSST-TTCT-TEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCC
T ss_pred EEEEEecCCCEEEECHHH-HHHhHHHHHHHhccc-ccCC-CceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCcc
Confidence 378888899999999997 889999999998866 5555 689999999999999999997633 24
Q ss_pred cChhhHHHHHHHhhhcCh
Q psy14726 160 ITEDNVASLLLATDFFCM 177 (712)
Q Consensus 160 i~~~~~~~ll~~A~~~~i 177 (712)
++.+.+.+|+.||++|+|
T Consensus 82 vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 82 IPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHhCc
Confidence 667788888888888865
No 45
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.68 E-value=3.7e-08 Score=90.09 Aligned_cols=98 Identities=17% Similarity=0.423 Sum_probs=72.9
Q ss_pred ccEEEEecCCcEEeceeeeecccCHHHHHhhcCCCC----cCCccceEEcCCCCHHHHHHHhhhhccCc-----------
Q psy14726 93 CDATIVLADNSHFPIHRNILCACSDYFRALFTTSLH----DQEKFSLVEIPGVDASVMTSLIEYAYLRK----------- 157 (712)
Q Consensus 93 ~Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~~----e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~----------- 157 (712)
.-|+|+..||++|.+++.+ |..|..++.|+...-. +... ..|.|++++..+|+.|++|++...
T Consensus 7 ~~i~L~SsDG~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~-~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~ 84 (169)
T 3v7d_A 7 SNVVLVSGEGERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDE-IVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDD 84 (169)
T ss_dssp CEEEEECTTCCEEEEEHHH-HTTSHHHHHHHHC------------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC-----
T ss_pred CeEEEEeCCCCEEEecHHH-HHHhHHHHHHHHhcCcccccccCC-CceeeCCCCHHHHHHHHHHHHHcccCCCccccccc
Confidence 3588988899999999998 7789999999975322 2233 679999999999999999996532
Q ss_pred --------------eecChhhHHHHHHHhhhcChHHHHHHHHHhhcccC
Q psy14726 158 --------------LHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLT 192 (712)
Q Consensus 158 --------------~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l 192 (712)
+.++.+.+.+|+.||++|+|..|.++|++.+...+
T Consensus 85 ~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~i 133 (169)
T 3v7d_A 85 SRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMI 133 (169)
T ss_dssp ---CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred ccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 23455667777777777777777777777764433
No 46
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.63 E-value=2.9e-08 Score=81.46 Aligned_cols=81 Identities=17% Similarity=0.338 Sum_probs=64.3
Q ss_pred EEEEecCCcEEeceeeeecccCHHHHHhhcC--CCCcCCccceEEcCCCCHHHHHHHhhhhccCc-----------eecC
Q psy14726 95 ATIVLADNSHFPIHRNILCACSDYFRALFTT--SLHDQEKFSLVEIPGVDASVMTSLIEYAYLRK-----------LHIT 161 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~--~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~-----------~~i~ 161 (712)
|+|+..||++|.+++.+ |..|.+++.||.. .+.|+.. ..|.|++++..+++.+++|+|... -.++
T Consensus 3 v~L~SsDg~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~-~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd 80 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENET-NEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA 80 (96)
T ss_dssp EEEECTTSCEEEEEHHH-HTTSHHHHHHHHCC---------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCC
T ss_pred EEEEecCCCEEEeCHHH-HHHhHHHHHHHHccCCcccccC-CceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccC
Confidence 67887899999999997 8899999999985 2356666 789999999999999999997633 2467
Q ss_pred hhhHHHHHHHhhhcCh
Q psy14726 162 EDNVASLLLATDFFCM 177 (712)
Q Consensus 162 ~~~~~~ll~~A~~~~i 177 (712)
.+.+.+|+.||++|+|
T Consensus 81 ~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 81 PEIALELLMAANFLDC 96 (96)
T ss_dssp TTTHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 7788999999988875
No 47
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.58 E-value=6.8e-05 Score=77.31 Aligned_cols=250 Identities=9% Similarity=-0.093 Sum_probs=149.3
Q ss_pred CceEEEEECCCCcEEEcc---cCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcE-EEeCCCCCCccee
Q psy14726 362 TDFVETYDTRADRWVKIE---QVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVW-KEIAPMNFKRCYV 437 (712)
Q Consensus 362 ~~~v~~~d~~~~~W~~~~---~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~~~~r~~~ 437 (712)
.+.+-.+|+.++++...- ....+.....+.+++.++++|+.... .+.+..+|+.+.+- ..++... ..+
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~-----~~~v~viD~~t~~~~~~i~~~~---~p~ 87 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN-----SHVIFAIDINTFKEVGRITGFT---SPR 87 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG-----GTEEEEEETTTCCEEEEEECCS---SEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC-----CCEEEEEECcccEEEEEcCCCC---CCc
Confidence 567899999999886511 01112234446677789999999752 35799999999886 4454332 233
Q ss_pred EEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCcc----ccceeEEEECCEEEEEcccCCCCccCceEEee
Q psy14726 438 STAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE----RSDASATTLQGKIYITGGFNGHNCLNSCEVYD 512 (712)
Q Consensus 438 ~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd 512 (712)
.++. .++++|+.... .+.+.++|+.+.+-...-+.+.. ..-..++.-++++||..-. ..+.+.++|
T Consensus 88 ~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~----~~~~v~viD 158 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS----YQNRILKID 158 (328)
T ss_dssp EEEEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT----TCCEEEEEE
T ss_pred EEEEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC----CCCEEEEEE
Confidence 4454 78899998642 36799999998875422121110 0223445578999998521 135799999
Q ss_pred CCCCeeEEeCCCCCCCcceEEE-EECCEEEEEcCCCCCCc-----cceEEEEeCCCCcEEEcCCCCCCccceEEEEE--C
Q psy14726 513 PECNQWTLIEPMRHRRSGVSCI-AYHECIYVIGGFNGMSR-----MCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--D 584 (712)
Q Consensus 513 ~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~-----~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 584 (712)
+.+++....-+... .-+.++ .-++++|+....+.... ...+.++|+.+.+....-..+....-.+++.. +
T Consensus 159 ~~t~~~~~~i~~g~--~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~ 236 (328)
T 3dsm_A 159 TETDKVVDELTIGI--QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTR 236 (328)
T ss_dssp TTTTEEEEEEECSS--CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTS
T ss_pred CCCCeEEEEEEcCC--CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCC
Confidence 99988654322211 111222 23688888864221111 36899999999876643333333333445555 5
Q ss_pred CEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCC-cccceEEEEE--cCcceeEe
Q psy14726 585 DMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNI-YRSALSACVI--MGLPNVYD 638 (712)
Q Consensus 585 ~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~~~~v~~ 638 (712)
+.+|+..+ .+++||+++++.....-.+. .....+.++- ++.+|+..
T Consensus 237 ~~lyv~~~--------~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 237 DTLYWINN--------DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp CEEEEESS--------SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred CEEEEEcc--------EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 67888754 68999999887632222222 2223333342 56777763
No 48
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.29 E-value=8.6e-07 Score=74.63 Aligned_cols=82 Identities=17% Similarity=0.323 Sum_probs=64.7
Q ss_pred cEEEEecCCcEEeceeeeecccCHHHHHhhcC--CCCcCCccceEEcCCCCHHHHHHHhhhhccCc-----------eec
Q psy14726 94 DATIVLADNSHFPIHRNILCACSDYFRALFTT--SLHDQEKFSLVEIPGVDASVMTSLIEYAYLRK-----------LHI 160 (712)
Q Consensus 94 Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~--~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~-----------~~i 160 (712)
-|+|+..||++|.+++.+ |..|..++.|+.. .+.|... ..|.|++|+..+++.+++|++... ..+
T Consensus 18 ~v~L~SsDG~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~-~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~v 95 (112)
T 1vcb_B 18 YVKLISSDGHEFIVKREH-ALTSGTIKAMLSGPGQFAENET-NEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPI 95 (112)
T ss_dssp EEEEECTTSCEEEEEHHH-HHTSHHHHHHSSCC---------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCC
T ss_pred EEEEEcCCCCEEEECHHH-HHHhHHHHHHHHhcCCcccccC-CceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCccc
Confidence 488887899999999994 6789999999985 2345555 689999999999999999996532 257
Q ss_pred ChhhHHHHHHHhhhcCh
Q psy14726 161 TEDNVASLLLATDFFCM 177 (712)
Q Consensus 161 ~~~~~~~ll~~A~~~~i 177 (712)
+.+.+.+|+.||++|+|
T Consensus 96 d~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 96 APEIALELLMAANFLDC 112 (112)
T ss_dssp CHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhCc
Confidence 77889999999998875
No 49
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.23 E-value=0.00031 Score=72.26 Aligned_cols=232 Identities=10% Similarity=-0.054 Sum_probs=136.1
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEE-cccCCCCCCCcceEEEE-ECCEEEEEeecCCCCccceEEEEECCCCcEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVK-IEQVDPMGPRAYHGTAV-IGYNIYVIGGFDGNEYYNSCRCFNAVTKVWK 425 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~-~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 425 (712)
+.+|+... ..+.+..+|+.+.+-.. ++. ....+.+++ -++++|+.... ...+.++|+.+++-.
T Consensus 54 ~~lyv~~~-----~~~~v~viD~~t~~~~~~i~~-----~~~p~~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 54 GIGWIVVN-----NSHVIFAIDINTFKEVGRITG-----FTSPRYIHFLSDEKAYVTQIW-----DYRIFIINPKTYEIT 118 (328)
T ss_dssp TEEEEEEG-----GGTEEEEEETTTCCEEEEEEC-----CSSEEEEEEEETTEEEEEEBS-----CSEEEEEETTTTEEE
T ss_pred CEEEEEEc-----CCCEEEEEECcccEEEEEcCC-----CCCCcEEEEeCCCeEEEEECC-----CCeEEEEECCCCeEE
Confidence 45565543 13568899999887643 321 223345555 58899998743 357999999998864
Q ss_pred EeCCCCCC----cceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEE-ECCEEEEEcccC
Q psy14726 426 EIAPMNFK----RCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATT-LQGKIYITGGFN 500 (712)
Q Consensus 426 ~~~~~~~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 500 (712)
..-+.... .....++..++++||..- ...+.+.++|+.+.+....-+. +..-+.++. -+|++|+....+
T Consensus 119 ~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~----~~~~~v~viD~~t~~~~~~i~~--g~~p~~i~~~~dG~l~v~~~~~ 192 (328)
T 3dsm_A 119 GYIECPDMDMESGSTEQMVQYGKYVYVNCW----SYQNRILKIDTETDKVVDELTI--GIQPTSLVMDKYNKMWTITDGG 192 (328)
T ss_dssp EEEECTTCCTTTCBCCCEEEETTEEEEEEC----TTCCEEEEEETTTTEEEEEEEC--SSCBCCCEECTTSEEEEEBCCB
T ss_pred EEEEcCCccccCCCcceEEEECCEEEEEcC----CCCCEEEEEECCCCeEEEEEEc--CCCccceEEcCCCCEEEEECCC
Confidence 32122210 022344557899999842 1136799999999876433222 111122222 268988876422
Q ss_pred CCCc-----cCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCC
Q psy14726 501 GHNC-----LNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYN 573 (712)
Q Consensus 501 ~~~~-----~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 573 (712)
.... .+.+.++|+.+++....-.++....-..++.. ++.+|+..+ .++++|+.+.+.....-.+.
T Consensus 193 ~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--------~v~~~d~~t~~~~~~~~~~~ 264 (328)
T 3dsm_A 193 YEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--------DIWRMPVEADRVPVRPFLEF 264 (328)
T ss_dssp CTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--------SEEEEETTCSSCCSSCSBCC
T ss_pred ccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--------EEEEEECCCCceeeeeeecC
Confidence 1111 36899999999986644334433333344444 567888753 78999998877532222222
Q ss_pred -CccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 574 -PRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 574 -~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
...-.++++- ++.||+....+- .....|.+||++.
T Consensus 265 ~~~~p~gi~vdp~~g~lyva~~~~y-~~~~~V~v~d~~g 302 (328)
T 3dsm_A 265 RDTKYYGLTVNPNNGEVYVADAIDY-QQQGIVYRYSPQG 302 (328)
T ss_dssp CSSCEEEEEECTTTCCEEEEECTTS-SSEEEEEEECTTC
T ss_pred CCCceEEEEEcCCCCeEEEEccccc-ccCCEEEEECCCC
Confidence 2333445553 688999862211 1135799999983
No 50
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.22 E-value=0.00046 Score=66.68 Aligned_cols=185 Identities=13% Similarity=0.057 Sum_probs=125.1
Q ss_pred CcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeec
Q psy14726 387 RAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNY 466 (712)
Q Consensus 387 r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~ 466 (712)
-.-+++.+.++.+|+..|..+ .+.+..+|+.+++-..--+++..-.+.+++..+++||+.... .+.+++||+
T Consensus 21 ~ftqGL~~~~~~LyestG~~g---~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~-----~~~v~v~D~ 92 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETG---RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR-----NHEGFVYDL 92 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTT---SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-----SSEEEEEET
T ss_pred cccccEEEECCEEEEECCCCC---CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee-----CCEEEEEEC
Confidence 344578888999999999654 357899999999987766777777888899999999998543 368999999
Q ss_pred CCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEE-eC--CCCCCCc-ceEEEEECCEEEE
Q psy14726 467 TENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTL-IE--PMRHRRS-GVSCIAYHECIYV 542 (712)
Q Consensus 467 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~--~~p~~r~-~~~~~~~~~~iyv 542 (712)
.+.+ .+...+.+..+.+++.-++++|+.-| .+.+..+||++.+-.. +. .-+.+.. -..+...+++||+
T Consensus 93 ~tl~--~~~ti~~~~~Gwglt~dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lya 164 (243)
T 3mbr_X 93 ATLT--PRARFRYPGEGWALTSDDSHLYMSDG------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLA 164 (243)
T ss_dssp TTTE--EEEEEECSSCCCEEEECSSCEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred CcCc--EEEEEeCCCCceEEeeCCCEEEEECC------CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEE
Confidence 8765 33344444566777766778998765 2579999999976432 21 1222211 1234556899996
Q ss_pred EcCCCCCCccceEEEEeCCCCc---EEEcCCCC---------CCccceEEEEE--CCEEEEEcc
Q psy14726 543 IGGFNGMSRMCNGEKYNPVTKT---WSQVPDMY---------NPRSNFAIEVI--DDMIFAIGG 592 (712)
Q Consensus 543 ~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p---------~~r~~~~~~~~--~~~i~v~GG 592 (712)
---. .+.|.+.||++++ |-.++.+. ..-.--++|.. ++++||.|-
T Consensus 165 nvw~-----s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 165 NVWL-----TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EETT-----TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EECC-----CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 5422 4789999999976 44443321 11122344444 578888864
No 51
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.19 E-value=2.2e-06 Score=71.85 Aligned_cols=93 Identities=19% Similarity=0.298 Sum_probs=75.8
Q ss_pred cEEEEecCCcEEeceeeeecccC-HHHHHhhcCCCC----cCCccceEEcCCCCHHHHHHHhhhhccCceecChh-hHHH
Q psy14726 94 DATIVLADNSHFPIHRNILCACS-DYFRALFTTSLH----DQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITED-NVAS 167 (712)
Q Consensus 94 Dv~l~v~~~~~~~~Hk~vL~~~S-~yF~~mf~~~~~----e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~i~~~-~~~~ 167 (712)
=|+|.| +|+.|...+..|+... .+|.+||.+... .... .++.| |-+|..|+.||+|+.+|++.++.+ ....
T Consensus 7 ~v~LNV-GG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~-~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~~~~ 83 (107)
T 3drz_A 7 WVRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDET-GAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEG 83 (107)
T ss_dssp EEEEEE-TTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTT-SCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSCHHH
T ss_pred EEEEEE-CCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCC-ceEEe-cCChHHHHHHHHHhCCCeeCCCCCCCHHH
Confidence 377888 9999999999998875 578999986421 1123 45666 689999999999999999987654 3578
Q ss_pred HHHHhhhcChHHHHHHHHHhhc
Q psy14726 168 LLLATDFFCMSKAQDLCCDFIK 189 (712)
Q Consensus 168 ll~~A~~~~i~~L~~~c~~~l~ 189 (712)
+++-|.+|+|++|++.|.+-|.
T Consensus 84 l~~Ea~fy~l~~L~~~l~~~i~ 105 (107)
T 3drz_A 84 VLEEAEFYNITSLIKLVKDKIR 105 (107)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHh
Confidence 9999999999999999998664
No 52
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.18 E-value=0.003 Score=66.00 Aligned_cols=250 Identities=14% Similarity=0.186 Sum_probs=142.9
Q ss_pred cCcCCCceEEEEeecCCCCCCceEEEEECCCC--cEEEcccCCCC-----CCCcceEEEEECCEEEEEeecCCCCccceE
Q psy14726 342 RPRVPHEILFAIGGWSGGSPTDFVETYDTRAD--RWVKIEQVDPM-----GPRAYHGTAVIGYNIYVIGGFDGNEYYNSC 414 (712)
Q Consensus 342 ~pr~~~~~i~~~GG~~~~~~~~~v~~~d~~~~--~W~~~~~~~~~-----~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v 414 (712)
.|-...+.||+... ...+.+||..++ .|..-...... ......+.++.++.||+... ...+
T Consensus 48 ~p~v~~~~v~~~~~------~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------~g~l 115 (376)
T 3q7m_A 48 HPALADNVVYAADR------AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE------KAQV 115 (376)
T ss_dssp CCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET------TSEE
T ss_pred ccEEECCEEEEEcC------CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC------CCEE
Confidence 34444566665432 237899998765 47652111110 12233444556888887543 2469
Q ss_pred EEEECCCCc--EEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEcccCCc--cccceeEEE
Q psy14726 415 RCFNAVTKV--WKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNV--ERSDASATT 488 (712)
Q Consensus 415 ~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~--~r~~~~~~~ 488 (712)
+++|+.+++ |+.-..-. ...+.++.++.||+..+ ...++.||+.+.+ |+.-...+. .+.....+.
T Consensus 116 ~a~d~~tG~~~W~~~~~~~---~~~~p~~~~~~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~ 186 (376)
T 3q7m_A 116 YALNTSDGTVAWQTKVAGE---ALSRPVVSDGLVLIHTS------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 186 (376)
T ss_dssp EEEETTTCCEEEEEECSSC---CCSCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEE
T ss_pred EEEECCCCCEEEEEeCCCc---eEcCCEEECCEEEEEcC------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE
Confidence 999998876 76432211 12223456888888543 2479999998775 876543221 222334455
Q ss_pred ECCEEEEEcccCCCCccCceEEeeCCCCe--eEEeCCCCCCC--------cceEEEEECCEEEEEcCCCCCCccceEEEE
Q psy14726 489 LQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIEPMRHRR--------SGVSCIAYHECIYVIGGFNGMSRMCNGEKY 558 (712)
Q Consensus 489 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 558 (712)
.++.+|+ |..+ ..+..||+.+++ |+.-...|... .....+..++.+|+.+. ...+.++
T Consensus 187 ~~~~v~~-g~~~-----g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~------~g~l~~~ 254 (376)
T 3q7m_A 187 AFGAAVV-GGDN-----GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY------NGNLTAL 254 (376)
T ss_dssp ETTEEEE-CCTT-----TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT------TSCEEEE
T ss_pred ECCEEEE-EcCC-----CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec------CcEEEEE
Confidence 5888777 3222 368999988765 87654332211 12233456888888753 2478999
Q ss_pred eCCCC--cEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCe--EEEccCCCCcccceEEEEEcCcc
Q psy14726 559 NPVTK--TWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDE--WYEATDMNIYRSALSACVIMGLP 634 (712)
Q Consensus 559 d~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~~ 634 (712)
|+.+. .|+.-.. ...+.+..++.||+.... ..+..||+.+++ |+.-. ++ .+...+.++.++.+
T Consensus 255 d~~tG~~~w~~~~~-----~~~~~~~~~~~l~~~~~~------g~l~~~d~~tG~~~w~~~~-~~-~~~~~~~~~~~~~l 321 (376)
T 3q7m_A 255 DLRSGQIMWKRELG-----SVNDFIVDGNRIYLVDQN------DRVMALTIDGGVTLWTQSD-LL-HRLLTSPVLYNGNL 321 (376)
T ss_dssp ETTTCCEEEEECCC-----CEEEEEEETTEEEEEETT------CCEEEEETTTCCEEEEECT-TT-TSCCCCCEEETTEE
T ss_pred ECCCCcEEeeccCC-----CCCCceEECCEEEEEcCC------CeEEEEECCCCcEEEeecc-cC-CCcccCCEEECCEE
Confidence 99876 4775421 123455668888887532 258999998875 76531 11 22223345566777
Q ss_pred eeE
Q psy14726 635 NVY 637 (712)
Q Consensus 635 ~v~ 637 (712)
|+.
T Consensus 322 ~v~ 324 (376)
T 3q7m_A 322 VVG 324 (376)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 53
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.05 E-value=0.0025 Score=66.59 Aligned_cols=231 Identities=12% Similarity=0.091 Sum_probs=135.1
Q ss_pred ceEEEEECCCCc--EEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCC--Ccce
Q psy14726 363 DFVETYDTRADR--WVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNF--KRCY 436 (712)
Q Consensus 363 ~~v~~~d~~~~~--W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~--~r~~ 436 (712)
..+.++|..+++ |..- ... ......++.++.+|+..+ ...++.||+.+++ |+.-...+. .+..
T Consensus 113 g~l~a~d~~tG~~~W~~~--~~~---~~~~~p~~~~~~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 113 AQVYALNTSDGTVAWQTK--VAG---EALSRPVVSDGLVLIHTS------NGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp SEEEEEETTTCCEEEEEE--CSS---CCCSCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred CEEEEEECCCCCEEEEEe--CCC---ceEcCCEEECCEEEEEcC------CCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 468999988664 7652 111 112223445888877543 2469999998886 875433221 1222
Q ss_pred eEEEEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEcccCCccc--------cceeEEEECCEEEEEcccCCCCccC
Q psy14726 437 VSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNVER--------SDASATTLQGKIYITGGFNGHNCLN 506 (712)
Q Consensus 437 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~ 506 (712)
.+.+..++.||+... ...+..+|+.+.+ |+.-...|... .....+..++.+|+.+. + .
T Consensus 182 ~~~~~~~~~v~~g~~------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~-----g 249 (376)
T 3q7m_A 182 SAPTTAFGAAVVGGD------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-N-----G 249 (376)
T ss_dssp CCCEEETTEEEECCT------TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-T-----S
T ss_pred CCcEEECCEEEEEcC------CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-C-----c
Confidence 334555788777321 1468999988764 76543333221 22344556888988652 2 3
Q ss_pred ceEEeeCCCCe--eEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCc--EEEcCCCCCCccceEEEE
Q psy14726 507 SCEVYDPECNQ--WTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT--WSQVPDMYNPRSNFAIEV 582 (712)
Q Consensus 507 ~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~ 582 (712)
.+.++|+.+++ |+.-.. ...+.+..++.||+... ...+.+||+.+.+ |+.-. ++ .+...+.+.
T Consensus 250 ~l~~~d~~tG~~~w~~~~~-----~~~~~~~~~~~l~~~~~------~g~l~~~d~~tG~~~w~~~~-~~-~~~~~~~~~ 316 (376)
T 3q7m_A 250 NLTALDLRSGQIMWKRELG-----SVNDFIVDGNRIYLVDQ------NDRVMALTIDGGVTLWTQSD-LL-HRLLTSPVL 316 (376)
T ss_dssp CEEEEETTTCCEEEEECCC-----CEEEEEEETTEEEEEET------TCCEEEEETTTCCEEEEECT-TT-TSCCCCCEE
T ss_pred EEEEEECCCCcEEeeccCC-----CCCCceEECCEEEEEcC------CCeEEEEECCCCcEEEeecc-cC-CCcccCCEE
Confidence 68999998774 765421 12345666899999764 2468999998765 77642 11 122333455
Q ss_pred ECCEEEEEcccCCCceeeeEEEEECCCCe--EEEccCCCCcccceEEEEEcCcceeE
Q psy14726 583 IDDMIFAIGGFNGVTTIYHVECYDEKTDE--WYEATDMNIYRSALSACVIMGLPNVY 637 (712)
Q Consensus 583 ~~~~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~~~v~ 637 (712)
.++.||+... + ..+++||+.+++ |.. .++........++.++.+|+.
T Consensus 317 ~~~~l~v~~~-~-----g~l~~~d~~tG~~~~~~--~~~~~~~~~~~~~~~~~l~v~ 365 (376)
T 3q7m_A 317 YNGNLVVGDS-E-----GYLHWINVEDGRFVAQQ--KVDSSGFQTEPVAADGKLLIQ 365 (376)
T ss_dssp ETTEEEEECT-T-----SEEEEEETTTCCEEEEE--ECCTTCBCSCCEEETTEEEEE
T ss_pred ECCEEEEEeC-C-----CeEEEEECCCCcEEEEE--ecCCCcceeCCEEECCEEEEE
Confidence 6888887642 2 258999998876 543 222222333445567777775
No 54
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.04 E-value=0.00087 Score=65.29 Aligned_cols=183 Identities=12% Similarity=0.003 Sum_probs=119.6
Q ss_pred ceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCC
Q psy14726 389 YHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTE 468 (712)
Q Consensus 389 ~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 468 (712)
-.++.+.++.+|+..|..+ .+.+..+|+.+++-..--+++..-.+.+++..+++||+.... .+.+++||+.+
T Consensus 45 tqGL~~~~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~-----~~~v~v~D~~t 116 (262)
T 3nol_A 45 TEGFFYRNGYFYESTGLNG---RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK-----NGLGFVWNIRN 116 (262)
T ss_dssp EEEEEEETTEEEEEEEETT---EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-----SSEEEEEETTT
T ss_pred cceEEEECCEEEEECCCCC---CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee-----CCEEEEEECcc
Confidence 3566767999999999654 257899999999976655666666677889999999998543 36899999988
Q ss_pred CceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEE-eCC--CCCCCcc-eEEEEECCEEEEEc
Q psy14726 469 NQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTL-IEP--MRHRRSG-VSCIAYHECIYVIG 544 (712)
Q Consensus 469 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~--~p~~r~~-~~~~~~~~~iyv~G 544 (712)
.+- +...+.+-.+.+++.-++++|+.-| .+.++.+||++.+-.. +.. -+.+... ..+...+++||+--
T Consensus 117 ~~~--~~ti~~~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~ 188 (262)
T 3nol_A 117 LRQ--VRSFNYDGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANV 188 (262)
T ss_dssp CCE--EEEEECSSCCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred CcE--EEEEECCCCceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEE
Confidence 764 3333334466666665777888654 2579999999876432 221 1112111 12444589999643
Q ss_pred CCCCCCccceEEEEeCCCCcE---EEcCCCCC--------CccceEEEEE--CCEEEEEcc
Q psy14726 545 GFNGMSRMCNGEKYNPVTKTW---SQVPDMYN--------PRSNFAIEVI--DDMIFAIGG 592 (712)
Q Consensus 545 G~~~~~~~~~v~~yd~~~~~W---~~~~~~p~--------~r~~~~~~~~--~~~i~v~GG 592 (712)
- ..+.|.+.||++.+= -.++.+.. .-.-.++|.. ++++||.|-
T Consensus 189 w-----~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 189 W-----QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp T-----TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred c-----cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 2 247899999999863 33432211 1122445554 577888764
No 55
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.87 E-value=0.0011 Score=63.87 Aligned_cols=158 Identities=15% Similarity=0.073 Sum_probs=111.5
Q ss_pred cceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeC
Q psy14726 434 RCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDP 513 (712)
Q Consensus 434 r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~ 513 (712)
-+-.++...++.+|+..|..+. +.+.++|+.+.+=..--+++..-.+.+++..+++||+....+ +.+++||+
T Consensus 21 ~ftqGL~~~~~~LyestG~~g~---S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~-----~~v~v~D~ 92 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETGR---SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN-----HEGFVYDL 92 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTTS---CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----SEEEEEET
T ss_pred cccccEEEECCEEEEECCCCCC---ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC-----CEEEEEEC
Confidence 4456788889999999886543 679999999998766667777667788888899999986543 67999999
Q ss_pred CCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEE-c--CCCCCCccc-eEEEEECCEEEE
Q psy14726 514 ECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-V--PDMYNPRSN-FAIEVIDDMIFA 589 (712)
Q Consensus 514 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~--~~~p~~r~~-~~~~~~~~~i~v 589 (712)
++.+- +...+.+..+.+++.-+++||+.-| .+.++.+||++.+-.. + ...+.+... -.+...+++||+
T Consensus 93 ~tl~~--~~ti~~~~~Gwglt~dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lya 164 (243)
T 3mbr_X 93 ATLTP--RARFRYPGEGWALTSDDSHLYMSDG------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLA 164 (243)
T ss_dssp TTTEE--EEEEECSSCCCEEEECSSCEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred CcCcE--EEEEeCCCCceEEeeCCCEEEEECC------CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEE
Confidence 88764 3333334466777777788999876 3689999999865432 2 122222111 234556899886
Q ss_pred EcccCCCceeeeEEEEECCCCeE
Q psy14726 590 IGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 590 ~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
--- ..+++.+.||++++=
T Consensus 165 nvw-----~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 165 NVW-----LTSRIARIDPASGKV 182 (243)
T ss_dssp EET-----TTTEEEEECTTTCBE
T ss_pred EEC-----CCCeEEEEECCCCCE
Confidence 532 235899999999753
No 56
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.77 E-value=0.0033 Score=61.90 Aligned_cols=186 Identities=14% Similarity=0.040 Sum_probs=116.9
Q ss_pred ceEEEEEC-CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecC
Q psy14726 389 YHGTAVIG-YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYT 467 (712)
Q Consensus 389 ~~~~~~~~-~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 467 (712)
-+++++.+ +.+|+..|..+ .+.+..+|+.+++-..--+++......+++..+++||+..- ..+.+.+||+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~-----~~~~v~viD~~ 94 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVW-----LKNIGFIYDRR 94 (266)
T ss_dssp EEEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEET-----TCSEEEEEETT
T ss_pred cccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEe-----cCCEEEEEECC
Confidence 36777765 89999877422 36799999999997655455555566778888999999854 23679999998
Q ss_pred CCceEEcccCCcc-ccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeE-EeC--CCCCCC-cceEEEEECCEEEE
Q psy14726 468 ENQWSLIAPMNVE-RSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWT-LIE--PMRHRR-SGVSCIAYHECIYV 542 (712)
Q Consensus 468 ~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~--~~p~~r-~~~~~~~~~~~iyv 542 (712)
+.+ .+..++.+ ..+.+.+.-++++|+.-| .+.+..+|+++.+-. .+. ..+.+. .-..+...++++|+
T Consensus 95 t~~--v~~~i~~g~~~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyv 166 (266)
T 2iwa_A 95 TLS--NIKNFTHQMKDGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWA 166 (266)
T ss_dssp TTE--EEEEEECCSSSCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred CCc--EEEEEECCCCCeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEE
Confidence 764 33333333 333444444667998754 367999999987632 222 111111 11233444889997
Q ss_pred EcCCCCCCccceEEEEeCCCCc---EEEcCCC---------CCCccceEEEEE--CCEEEEEcccCC
Q psy14726 543 IGGFNGMSRMCNGEKYNPVTKT---WSQVPDM---------YNPRSNFAIEVI--DDMIFAIGGFNG 595 (712)
Q Consensus 543 ~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~---------p~~r~~~~~~~~--~~~i~v~GG~~~ 595 (712)
--.. .+.|.+.|+.+++ |-.++.+ +..-.-.+++.. ++++||.|+..+
T Consensus 167 n~~~-----~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 167 NIWQ-----TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp EETT-----SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred ecCC-----CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCC
Confidence 6532 4789999999875 3333211 111122455555 568999987653
No 57
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.72 E-value=0.0025 Score=62.03 Aligned_cols=153 Identities=10% Similarity=-0.006 Sum_probs=104.9
Q ss_pred ceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCC
Q psy14726 389 YHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTE 468 (712)
Q Consensus 389 ~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 468 (712)
-.++...++.||+..|..+ .+..+|+.+++-..-- ++..-.+.+++..+++||+.... .+.+++||+.+
T Consensus 57 tqGL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~-----~~~v~V~D~~T 125 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT-----EGLLFTWSGMP 125 (268)
T ss_dssp EEEEEEETTEEEEEETTTT-----EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS-----SCEEEEEETTT
T ss_pred cceEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc-----CCEEEEEECCc
Confidence 3677777999999999643 3899999999864333 55555667788899999998543 36899999987
Q ss_pred CceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEE-eC--CCCCCCc-ceEEEEECCEEEEEc
Q psy14726 469 NQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTL-IE--PMRHRRS-GVSCIAYHECIYVIG 544 (712)
Q Consensus 469 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~--~~p~~r~-~~~~~~~~~~iyv~G 544 (712)
.+- +...+.+..+.+++.-++++|+.-| .+.+..+|+++.+-.. +. .-+.+.. -..+...+|+||+--
T Consensus 126 l~~--~~ti~~~~eGwGLt~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv 197 (268)
T 3nok_A 126 PQR--ERTTRYSGEGWGLCYWNGKLVRSDG------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANI 197 (268)
T ss_dssp TEE--EEEEECSSCCCCEEEETTEEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred CcE--EEEEeCCCceeEEecCCCEEEEECC------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEE
Confidence 654 3333334456777777889999865 2579999999976432 22 1111111 123445589999643
Q ss_pred CCCCCCccceEEEEeCCCCcE
Q psy14726 545 GFNGMSRMCNGEKYNPVTKTW 565 (712)
Q Consensus 545 G~~~~~~~~~v~~yd~~~~~W 565 (712)
+ ..+.|.+.||++.+=
T Consensus 198 -w----~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 198 -W----HSSDVLEIDPATGTV 213 (268)
T ss_dssp -T----TCSEEEEECTTTCBE
T ss_pred -C----CCCeEEEEeCCCCcE
Confidence 1 147899999999853
No 58
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.62 E-value=0.0031 Score=65.98 Aligned_cols=226 Identities=14% Similarity=0.107 Sum_probs=122.0
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
.+++.|+. ...+..+|..+++-...-.. ...-.++++. +..+|+.|+.+ ..+..+|..+++...
T Consensus 3 ~l~vs~~~-----d~~v~v~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d~~~~~~~~ 68 (391)
T 1l0q_A 3 FAYIANSE-----SDNISVIDVTSNKVTATIPV----GSNPMGAVISPDGTKVYVANAHS-----NDVSIIDTATNNVIA 68 (391)
T ss_dssp EEEEEETT-----TTEEEEEETTTTEEEEEEEC----SSSEEEEEECTTSSEEEEEEGGG-----TEEEEEETTTTEEEE
T ss_pred EEEEEcCC-----CCEEEEEECCCCeEEEEeec----CCCcceEEECCCCCEEEEECCCC-----CeEEEEECCCCeEEE
Confidence 45666653 24688999888765542111 1122344443 44677776543 468999999887654
Q ss_pred eCCCCCCcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-C-CEEEEEcccCCC
Q psy14726 427 IAPMNFKRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-Q-GKIYITGGFNGH 502 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~ 502 (712)
.-..+. .-.+++.. ++ .||+.|..+ ..+.+||+.+++....-.. ...-.+++.. + ..+|+.++.+
T Consensus 69 ~~~~~~--~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~-- 137 (391)
T 1l0q_A 69 TVPAGS--SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGD-- 137 (391)
T ss_dssp EEECSS--SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTT--
T ss_pred EEECCC--CccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCC--
Confidence 433322 22333333 34 566665422 5699999998875433222 1111222222 3 3577777544
Q ss_pred CccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEE
Q psy14726 503 NCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAI 580 (712)
Q Consensus 503 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 580 (712)
..+..||..+++....-... ..-..++.. ++.||+.++.+ ..+..||+.+.+....... .....++
T Consensus 138 ---~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~--~~~~~~~ 205 (391)
T 1l0q_A 138 ---KTVSVINTVTKAVINTVSVG--RSPKGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVIDTVKV--EAAPSGI 205 (391)
T ss_dssp ---TEEEEEETTTTEEEEEEECC--SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEEC--SSEEEEE
T ss_pred ---CEEEEEECCCCcEEEEEecC--CCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCeEEEEEec--CCCccce
Confidence 47999999888765443222 112233332 34677776643 5689999988765443222 1112222
Q ss_pred EEE-CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 581 EVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 581 ~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
+.. +++.+++++.+. ....+.+||+.+.+-.
T Consensus 206 ~~~~~g~~l~~~~~~~--~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 206 AVNPEGTKAYVTNVDK--YFNTVSMIDTGTNKIT 237 (391)
T ss_dssp EECTTSSEEEEEEECS--SCCEEEEEETTTTEEE
T ss_pred EECCCCCEEEEEecCc--CCCcEEEEECCCCeEE
Confidence 222 444444443211 1236899999887543
No 59
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.0064 Score=62.88 Aligned_cols=242 Identities=10% Similarity=0.163 Sum_probs=126.5
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-C--CEEEEEeecCCCCccceEEEEECCCCcE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-G--YNIYVIGGFDGNEYYNSCRCFNAVTKVW 424 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~--~~lyv~GG~~~~~~~~~v~~yd~~~~~W 424 (712)
+..++.|+.+ ..+..||.....+..+...... ...-.+++.. + +.+++.|+.+ ..+..||..+++|
T Consensus 23 ~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~ 91 (379)
T 3jrp_A 23 GKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRW 91 (379)
T ss_dssp SSEEEEEETT-----SCEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCEEEEEECC-----CcEEEEecCCCcceeeeEecCC-CCcEEEEEeCCCCCCCEEEEeccC-----CEEEEEEcCCCce
Confidence 3455666542 3477777765555543211111 1112233332 2 6777777754 3588999999988
Q ss_pred EEeCCCCCCcceeEEEEE--C--CeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-----------
Q psy14726 425 KEIAPMNFKRCYVSTAVH--H--DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL----------- 489 (712)
Q Consensus 425 ~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----------- 489 (712)
..+..+.........+.+ + +.+++.|+.+ ..+..||..+........+........+..+
T Consensus 92 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 92 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-------
T ss_pred eEeeeecCCCcceEEEEeCCCCCCCEEEEecCC-----CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccc
Confidence 766554433233333332 3 5677777654 4688888877632111111111111112222
Q ss_pred ----CCEEEEEcccCCCCccCceEEeeCCCC--eeEEeCCCCCCCcceEEEEE--C---CEEEEEcCCCCCCccceEEEE
Q psy14726 490 ----QGKIYITGGFNGHNCLNSCEVYDPECN--QWTLIEPMRHRRSGVSCIAY--H---ECIYVIGGFNGMSRMCNGEKY 558 (712)
Q Consensus 490 ----~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~iyv~GG~~~~~~~~~v~~y 558 (712)
++.+++.|+.++ .+..||..+. .|..+..+.........+.+ + +.+++.|+.+ ..+..|
T Consensus 167 ~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----g~i~iw 236 (379)
T 3jrp_A 167 NGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD-----RTCIIW 236 (379)
T ss_dssp ---CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT-----SCEEEE
T ss_pred cCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC-----CEEEEE
Confidence 367788887664 4777776543 46555444332222233333 3 6788888765 357788
Q ss_pred eCCCCc----EEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECC-CCeEEEccCCCC
Q psy14726 559 NPVTKT----WSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEK-TDEWYEATDMNI 620 (712)
Q Consensus 559 d~~~~~----W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p~ 620 (712)
|..+.. ............-.+++.. ++..+++|+.++ .+.+||.. .+.|..+..+..
T Consensus 237 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~ 299 (379)
T 3jrp_A 237 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN-----KVTLWKENLEGKWEPAGEVHQ 299 (379)
T ss_dssp EESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSS-----SEEEEEEEETTEEEEEEEEC-
T ss_pred eCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCC-----cEEEEeCCCCCccccccceec
Confidence 877652 2222221122222222222 677777877655 46667665 578887755444
No 60
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.61 E-value=0.0017 Score=63.18 Aligned_cols=158 Identities=13% Similarity=0.060 Sum_probs=106.1
Q ss_pred ceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCC
Q psy14726 435 CYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPE 514 (712)
Q Consensus 435 ~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 514 (712)
+..++...++.+|+..|..+. +.+.++|+.+.+=..--+++..-.+.+++..+++||+....+ +.+++||++
T Consensus 44 ftqGL~~~~~~LyestG~~g~---S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~-----~~v~v~D~~ 115 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGLNGR---SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN-----GLGFVWNIR 115 (262)
T ss_dssp EEEEEEEETTEEEEEEEETTE---EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----SEEEEEETT
T ss_pred ccceEEEECCEEEEECCCCCC---ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC-----CEEEEEECc
Confidence 335666779999999986543 579999999998655556665555667788899999996543 679999998
Q ss_pred CCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEE-cCC--CCCCccce-EEEEECCEEEEE
Q psy14726 515 CNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-VPD--MYNPRSNF-AIEVIDDMIFAI 590 (712)
Q Consensus 515 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~--~p~~r~~~-~~~~~~~~i~v~ 590 (712)
+.+-. ..++.+-.+.+++.-++++|+.-| .+.++.+||.+.+-.. +.- ...+.... .+...+++||+-
T Consensus 116 t~~~~--~ti~~~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan 187 (262)
T 3nol_A 116 NLRQV--RSFNYDGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFAN 187 (262)
T ss_dssp TCCEE--EEEECSSCCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred cCcEE--EEEECCCCceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEE
Confidence 87643 223333356667766778888765 3679999999865332 211 11111111 244558998864
Q ss_pred cccCCCceeeeEEEEECCCCeEE
Q psy14726 591 GGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 591 GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
- + ..+.|.+.||++++=.
T Consensus 188 ~-w----~~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 188 V-W----QTNKIVRIDPETGKVT 205 (262)
T ss_dssp E-T----TSSEEEEECTTTCBEE
T ss_pred E-c----cCCeEEEEECCCCcEE
Confidence 2 1 2358999999998643
No 61
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.52 E-value=0.077 Score=52.55 Aligned_cols=217 Identities=9% Similarity=-0.003 Sum_probs=118.6
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..+..||+. +.+....... ....-+++++. ++.+|+.... ...+++||+. +++..+........-++++.
T Consensus 36 ~~v~~~d~~-~~~~~~~~~~--~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~ 106 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPLPT--PDAKVMCLTISSDGEVWFTENA-----ANKIGRITKK-GIIKEYTLPNPDSAPYGITE 106 (299)
T ss_dssp TEEEEECTT-CCEEEEECSS--TTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEE
T ss_pred CcEEEEcCC-CCeEEecCCc--ccCceeeEEECCCCCEEEeCCC-----CCeEEEECCC-CcEEEEeCCCcCCCceeeEE
Confidence 468889988 7776543211 11223344443 6778877532 2358999986 55554432112223344444
Q ss_pred E-CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCee
Q psy14726 442 H-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQW 518 (712)
Q Consensus 442 ~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 518 (712)
. +|++|+.+.. ...+.++|+ +.+...... +..........+ ++++|+.... ...+.+||+ +++.
T Consensus 107 ~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~ 173 (299)
T 2z2n_A 107 GPNGDIWFTEMN-----GNRIGRITD-DGKIREYEL-PNKGSYPSFITLGSDNALWFTENQ-----NNAIGRITE-SGDI 173 (299)
T ss_dssp CTTSCEEEEETT-----TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCE
T ss_pred CCCCCEEEEecC-----CceEEEECC-CCCEEEecC-CCCCCCCceEEEcCCCCEEEEeCC-----CCEEEEEcC-CCcE
Confidence 3 5789886532 246899998 666554422 211112222333 5789886532 246899999 7777
Q ss_pred EEeCCCCCCCcc-eEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccc-eEEEEE-CCEEEEEcccC
Q psy14726 519 TLIEPMRHRRSG-VSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSN-FAIEVI-DDMIFAIGGFN 594 (712)
Q Consensus 519 ~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~i~v~GG~~ 594 (712)
.... .+..... .+++.. ++.||+.... ...+.+||+ ++++..... +..... .+++.- ++.+|+....+
T Consensus 174 ~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~ 245 (299)
T 2z2n_A 174 TEFK-IPTPASGPVGITKGNDDALWFVEII-----GNKIGRITT-SGEITEFKI-PTPNARPHAITAGAGIDLWFTEWGA 245 (299)
T ss_dssp EEEE-CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECSTTCEEEEETTT
T ss_pred EEee-CCCCCCcceeEEECCCCCEEEEccC-----CceEEEECC-CCcEEEEEC-CCCCCCceeEEECCCCCEEEeccCC
Confidence 6542 1211122 233332 4778887642 357899999 777766422 211222 233332 57788774221
Q ss_pred CCceeeeEEEEECCCCeEEEc
Q psy14726 595 GVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 595 ~~~~~~~v~~yd~~~~~W~~~ 615 (712)
+.+.+||+ +++....
T Consensus 246 -----~~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 246 -----NKIGRLTS-NNIIEEY 260 (299)
T ss_dssp -----TEEEEEET-TTEEEEE
T ss_pred -----ceEEEECC-CCceEEE
Confidence 36889998 4555444
No 62
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.47 E-value=0.0077 Score=62.93 Aligned_cols=224 Identities=14% Similarity=0.105 Sum_probs=120.8
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
.+++.|+.+ ..+..+|..+++....- .. +..-.+++.. +..||+.|.. ...++.||+.+++...
T Consensus 45 ~l~~~~~~d-----~~i~v~d~~~~~~~~~~--~~--~~~v~~~~~spdg~~l~~~~~~-----~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 45 KVYVANAHS-----NDVSIIDTATNNVIATV--PA--GSSPQGVAVSPDGKQVYVTNMA-----SSTLSVIDTTSNTVAG 110 (391)
T ss_dssp EEEEEEGGG-----TEEEEEETTTTEEEEEE--EC--SSSEEEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEE
T ss_pred EEEEECCCC-----CeEEEEECCCCeEEEEE--EC--CCCccceEECCCCCEEEEEECC-----CCEEEEEECCCCeEEE
Confidence 455555432 46888999888765421 11 1122344444 4456665542 2469999999887654
Q ss_pred eCCCCCCcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE---CCEEEEEcccCC
Q psy14726 427 IAPMNFKRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL---QGKIYITGGFNG 501 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~ 501 (712)
..... ..-.+++.. ++ .+|+.++.+ ..+.+||+.+.+....-... .. ...+.+ +..+|+.++.+
T Consensus 111 ~~~~~--~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~--~~-~~~~~~~~dg~~l~~~~~~~- 179 (391)
T 1l0q_A 111 TVKTG--KSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTKAVINTVSVG--RS-PKGIAVTPDGTKVYVANFDS- 179 (391)
T ss_dssp EEECS--SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECC--SS-EEEEEECTTSSEEEEEETTT-
T ss_pred EEeCC--CCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEecC--CC-cceEEECCCCCEEEEEeCCC-
Confidence 33222 222344443 34 576776532 57999999888765432221 11 122233 34677776544
Q ss_pred CCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC-EEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceE
Q psy14726 502 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFA 579 (712)
Q Consensus 502 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 579 (712)
..+..||..+++....-... ..-.+++.. ++ .||+.+. +. ....+..||+.+.+-...- +......+
T Consensus 180 ----~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~-~~--~~~~v~~~d~~~~~~~~~~--~~~~~~~~ 248 (391)
T 1l0q_A 180 ----MSISVIDTVTNSVIDTVKVE--AAPSGIAVNPEGTKAYVTNV-DK--YFNTVSMIDTGTNKITARI--PVGPDPAG 248 (391)
T ss_dssp ----TEEEEEETTTTEEEEEEECS--SEEEEEEECTTSSEEEEEEE-CS--SCCEEEEEETTTTEEEEEE--ECCSSEEE
T ss_pred ----CEEEEEECCCCeEEEEEecC--CCccceEECCCCCEEEEEec-Cc--CCCcEEEEECCCCeEEEEE--ecCCCccE
Confidence 46899999888654433221 122222222 34 5655542 10 1367899999876533221 11222223
Q ss_pred EEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 580 IEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 580 ~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
++.. +..+|+.++.++ .+.+||+.+++-.
T Consensus 249 ~~~s~dg~~l~~s~~~d~-----~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 249 IAVTPDGKKVYVALSFXN-----TVSVIDTATNTIT 279 (391)
T ss_dssp EEECTTSSEEEEEETTTT-----EEEEEETTTTEEE
T ss_pred EEEccCCCEEEEEcCCCC-----EEEEEECCCCcEE
Confidence 3333 346777766543 6889999887654
No 63
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.41 E-value=0.013 Score=57.48 Aligned_cols=155 Identities=16% Similarity=0.102 Sum_probs=100.1
Q ss_pred eeEEEEEC-CeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCC
Q psy14726 436 YVSTAVHH-DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPE 514 (712)
Q Consensus 436 ~~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 514 (712)
-++++..+ +.+|+..|..+ .+.+.++|+.+++=...-+++....+.+.+..++++|+..-.+ +.+.+||+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~-----~~v~viD~~ 94 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLK-----NIGFIYDRR 94 (266)
T ss_dssp EEEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTC-----SEEEEEETT
T ss_pred cccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecC-----CEEEEEECC
Confidence 46777666 89999877432 3689999999988554444544445566777789999986433 679999998
Q ss_pred CCeeEEeCCCCCC-CcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEE-EcC--CCCCCc-cceEEEEECCEEEE
Q psy14726 515 CNQWTLIEPMRHR-RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWS-QVP--DMYNPR-SNFAIEVIDDMIFA 589 (712)
Q Consensus 515 ~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~--~~p~~r-~~~~~~~~~~~i~v 589 (712)
+.+= +..++.+ ..+.+.+.-++++|+.-| .+.+..+|+.+.+=. .++ ..+.+. .-..+...++++|+
T Consensus 95 t~~v--~~~i~~g~~~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyv 166 (266)
T 2iwa_A 95 TLSN--IKNFTHQMKDGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWA 166 (266)
T ss_dssp TTEE--EEEEECCSSSCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEE
T ss_pred CCcE--EEEEECCCCCeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEE
Confidence 7753 2222222 344555555678998765 468999999886533 221 111111 11234445889887
Q ss_pred EcccCCCceeeeEEEEECCCCe
Q psy14726 590 IGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 590 ~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
--.. .++|.+.|+++++
T Consensus 167 n~~~-----~~~V~vID~~tg~ 183 (266)
T 2iwa_A 167 NIWQ-----TDCIARISAKDGT 183 (266)
T ss_dssp EETT-----SSEEEEEETTTCC
T ss_pred ecCC-----CCeEEEEECCCCc
Confidence 6322 3489999999875
No 64
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.40 E-value=0.025 Score=58.19 Aligned_cols=240 Identities=11% Similarity=0.134 Sum_probs=123.5
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+.++++|+. ...+..||..+++|..+..... ....-.+++.. ++..++.|+.+ ..+..||..++++..
T Consensus 20 ~~~l~~~~~-----d~~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 20 RTQIAICPN-----NHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGRTWKP 88 (372)
T ss_dssp SSEEEEECS-----SSEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETTEEEE
T ss_pred CCEEEEEeC-----CCEEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCCEEEEEcCC-----CeEEEEECCCCeeee
Confidence 445666653 2468889988887544322111 11222334444 56677777754 358889998888765
Q ss_pred eCCCCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCc-eEEcccCCcc-ccceeEEEE--CCEEEEEcccC
Q psy14726 427 IAPMNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQ-WSLIAPMNVE-RSDASATTL--QGKIYITGGFN 500 (712)
Q Consensus 427 ~~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~ 500 (712)
...+...... .+++. .+++.++.|+.+ ..+..||..+.. |........+ ........+ ++..++.|+.+
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGS-----RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCC-----CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 5433222222 22333 256777777643 346777766654 4333222222 112222333 66777777765
Q ss_pred CCCccCceEEeeCCCC----------------eeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCC
Q psy14726 501 GHNCLNSCEVYDPECN----------------QWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVT 562 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~----------------~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~ 562 (712)
+ .+..||.... .-..+..+.........+.+ ++..++.|+.+ ..+..||..+
T Consensus 164 g-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~ 233 (372)
T 1k8k_C 164 F-----KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD-----STVCLADADK 233 (372)
T ss_dssp S-----CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT-----TEEEEEEGGG
T ss_pred C-----CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC-----CEEEEEECCC
Confidence 3 5777875311 11122222211122222333 55566666643 4688899876
Q ss_pred CcEEEcCCCCCCccceEEEE-ECCEEEEEcccCCCceeeeEEEEECCC--CeEEEccCCCC
Q psy14726 563 KTWSQVPDMYNPRSNFAIEV-IDDMIFAIGGFNGVTTIYHVECYDEKT--DEWYEATDMNI 620 (712)
Q Consensus 563 ~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~p~ 620 (712)
.+-...-..... .-.+++. -++.+++.| .++ .+.+||..+ +.|..+..+..
T Consensus 234 ~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~-~d~-----~i~i~~~~~~~~~~~~~~~~~~ 287 (372)
T 1k8k_C 234 KMAVATLASETL-PLLAVTFITESSLVAAG-HDC-----FPVLFTYDSAAGKLSFGGRLDV 287 (372)
T ss_dssp TTEEEEEECSSC-CEEEEEEEETTEEEEEE-TTS-----SCEEEEEETTTTEEEECCCCCC
T ss_pred CceeEEEccCCC-CeEEEEEecCCCEEEEE-eCC-----eEEEEEccCcCceEEEeeccCc
Confidence 653322111111 1122232 267766665 433 356777777 99988866654
No 65
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.37 E-value=0.041 Score=58.62 Aligned_cols=213 Identities=14% Similarity=0.183 Sum_probs=117.8
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH 442 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 442 (712)
..+..+|..+++-... .... ...-.+++. .+.+++.|+.+ ..+..||..+++-... +............
T Consensus 139 g~i~vwd~~~~~~~~~--~~~h-~~~v~~~~~-~~~~l~s~~~d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~ 207 (445)
T 2ovr_B 139 NTLKVWSAVTGKCLRT--LVGH-TGGVWSSQM-RDNIIISGSTD-----RTLKVWNAETGECIHT--LYGHTSTVRCMHL 207 (445)
T ss_dssp SCEEEEETTTCCEEEE--CCCC-SSCEEEEEE-ETTEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEE
T ss_pred CcEEEEECCCCcEEEE--EcCC-CCCEEEEEe-cCCEEEEEeCC-----CeEEEEECCcCcEEEE--ECCCCCcEEEEEe
Confidence 3578889887765431 1111 111223333 35566777754 3588999988764322 1112222233334
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE 522 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 522 (712)
++..++.|+.+ ..+..||..+.+-... +........++..++..++.|+.++ .+..||..+.+-..
T Consensus 208 ~~~~l~s~s~d-----g~i~~wd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~-- 273 (445)
T 2ovr_B 208 HEKRVVSGSRD-----ATLRVWDIETGQCLHV--LMGHVAAVRCVQYDGRRVVSGAYDF-----MVKVWDPETETCLH-- 273 (445)
T ss_dssp ETTEEEEEETT-----SEEEEEESSSCCEEEE--EECCSSCEEEEEECSSCEEEEETTS-----CEEEEEGGGTEEEE--
T ss_pred cCCEEEEEeCC-----CEEEEEECCCCcEEEE--EcCCcccEEEEEECCCEEEEEcCCC-----EEEEEECCCCcEeE--
Confidence 55666777644 4688999887653322 1111222334445788888887664 57888887765322
Q ss_pred CCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeE
Q psy14726 523 PMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHV 602 (712)
Q Consensus 523 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v 602 (712)
.+........++..++..++.|+.+ ..+..||..+.+-...- ............++..++.|+.++ .+
T Consensus 274 ~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~l~~~~~dg-----~i 341 (445)
T 2ovr_B 274 TLQGHTNRVYSLQFDGIHVVSGSLD-----TSIRVWDVETGNCIHTL--TGHQSLTSGMELKDNILVSGNADS-----TV 341 (445)
T ss_dssp EECCCSSCEEEEEECSSEEEEEETT-----SCEEEEETTTCCEEEEE--CCCCSCEEEEEEETTEEEEEETTS-----CE
T ss_pred EecCCCCceEEEEECCCEEEEEeCC-----CeEEEEECCCCCEEEEE--cCCcccEEEEEEeCCEEEEEeCCC-----eE
Confidence 2222222333444577777777754 56889998876533221 111222233444566777777665 57
Q ss_pred EEEECCCCeE
Q psy14726 603 ECYDEKTDEW 612 (712)
Q Consensus 603 ~~yd~~~~~W 612 (712)
.+||..+++-
T Consensus 342 ~vwd~~~~~~ 351 (445)
T 2ovr_B 342 KIWDIKTGQC 351 (445)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCcE
Confidence 8899877654
No 66
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.35 E-value=0.0072 Score=58.87 Aligned_cols=154 Identities=12% Similarity=-0.013 Sum_probs=102.8
Q ss_pred ceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCC
Q psy14726 435 CYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPE 514 (712)
Q Consensus 435 ~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~ 514 (712)
+..++...++.+|+..|..+ .+.++|+.+.+=..-- ++..-.+.+++..+++||+....+ +.+++||++
T Consensus 56 ftqGL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~-----~~v~V~D~~ 124 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE-----GLLFTWSGM 124 (268)
T ss_dssp CEEEEEEETTEEEEEETTTT-----EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS-----CEEEEEETT
T ss_pred ccceEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC-----CEEEEEECC
Confidence 34567777999999988643 3899999998743333 554445566777899999986543 679999998
Q ss_pred CCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEE-c--CCCCCCccc-eEEEEECCEEEEE
Q psy14726 515 CNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-V--PDMYNPRSN-FAIEVIDDMIFAI 590 (712)
Q Consensus 515 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~--~~~p~~r~~-~~~~~~~~~i~v~ 590 (712)
+.+-.. ..+.+..+.+++.-+++||+.-| .+.++.+||++.+-.. + ..-+.+... -.+...+++||+-
T Consensus 125 Tl~~~~--ti~~~~eGwGLt~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyan 196 (268)
T 3nok_A 125 PPQRER--TTRYSGEGWGLCYWNGKLVRSDG------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYAN 196 (268)
T ss_dssp TTEEEE--EEECSSCCCCEEEETTEEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred cCcEEE--EEeCCCceeEEecCCCEEEEECC------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEE
Confidence 876432 22333456677777889999876 3689999999865332 2 111111111 1244558998854
Q ss_pred cccCCCceeeeEEEEECCCCeE
Q psy14726 591 GGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 591 GG~~~~~~~~~v~~yd~~~~~W 612 (712)
- + ..+.|.+.||++++=
T Consensus 197 v-w----~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 197 I-W----HSSDVLEIDPATGTV 213 (268)
T ss_dssp E-T----TCSEEEEECTTTCBE
T ss_pred E-C----CCCeEEEEeCCCCcE
Confidence 2 2 235899999999853
No 67
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.35 E-value=0.11 Score=51.32 Aligned_cols=217 Identities=10% Similarity=-0.025 Sum_probs=118.5
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..+..||+. +++..+.... ....-+++++. ++.+|+.... ...+++||+. +++...........-++++.
T Consensus 41 ~~v~~~~~~-~~~~~~~~~~--~~~~~~~i~~~~~g~l~v~~~~-----~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~ 111 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFEVPT--PDAKVMCLIVSSLGDIWFTENG-----ANKIGKLSKK-GGFTEYPLPQPDSGPYGITE 111 (300)
T ss_dssp TEEEEECTT-SCEEEEECSS--TTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEE
T ss_pred CeEEEECCC-CceEEEECCC--CCCcceeEEECCCCCEEEEecC-----CCeEEEECCC-CCeEEecCCCCCCCCccceE
Confidence 468889988 6666532211 11223344443 5778876532 2468999998 77765432212233344444
Q ss_pred E-CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCee
Q psy14726 442 H-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQW 518 (712)
Q Consensus 442 ~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 518 (712)
- +|++|+.+.. ...+.+||+. .+..... ++..-.......+ ++++|+.... ...+.+||+ ++++
T Consensus 112 ~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~ 178 (300)
T 2qc5_A 112 GLNGDIWFTQLN-----GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQ-----NNSIGRITN-TGKL 178 (300)
T ss_dssp CSTTCEEEEETT-----TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCE
T ss_pred CCCCCEEEEccC-----CCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecC-----CCeEEEECC-CCcE
Confidence 3 6789886432 2468899987 6555432 2222222233333 5778886532 246899998 6666
Q ss_pred EEeCCCCCCCcce-EEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccc-eEEEEE-CCEEEEEcccC
Q psy14726 519 TLIEPMRHRRSGV-SCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSN-FAIEVI-DDMIFAIGGFN 594 (712)
Q Consensus 519 ~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~i~v~GG~~ 594 (712)
.... ++...... +++.. ++.||+.... ...+.+||+ +.++..... +..... .+++.- ++.||+....+
T Consensus 179 ~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~ 250 (300)
T 2qc5_A 179 EEYP-LPTNAAAPVGITSGNDGALWFVEIM-----GNKIGRITT-TGEISEYDI-PTPNARPHAITAGKNSEIWFTEWGA 250 (300)
T ss_dssp EEEE-CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECSTTCEEEEETTT
T ss_pred EEee-CCCCCCCcceEEECCCCCEEEEccC-----CCEEEEEcC-CCcEEEEEC-CCCCCCceEEEECCCCCEEEeccCC
Confidence 6543 22222222 33332 5788887532 246899998 566665422 211222 233332 56788875321
Q ss_pred CCceeeeEEEEECCCCeEEEc
Q psy14726 595 GVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 595 ~~~~~~~v~~yd~~~~~W~~~ 615 (712)
+.+.+||+ +++....
T Consensus 251 -----~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 251 -----NQIGRITN-DNTIQEY 265 (300)
T ss_dssp -----TEEEEECT-TSCEEEE
T ss_pred -----CeEEEECC-CCcEEEE
Confidence 36888998 4555543
No 68
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.33 E-value=0.037 Score=56.53 Aligned_cols=221 Identities=7% Similarity=-0.023 Sum_probs=119.7
Q ss_pred CceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCC------
Q psy14726 362 TDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFK------ 433 (712)
Q Consensus 362 ~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~------ 433 (712)
...+..+|+.+++....-.. ....+++++. ++.+|+.++.+ ..++.+|+.+++-...-+.+..
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 138 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHN----DLKPFGATINNTTQTLWFGNTVN-----SAVTAIDAKTGEVKGRLVLDDRKRTEEV 138 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEE----SSCCCSEEEETTTTEEEEEETTT-----TEEEEEETTTCCEEEEEESCCCCCCSSC
T ss_pred CccEEEEcCCCCeEEEEEec----CCCcceEEECCCCCEEEEEecCC-----CEEEEEeCCCCeeEEEEecCCCcccccc
Confidence 35689999988765432111 1112344444 35577776532 4789999998875332222211
Q ss_pred --cceeEEEEE-C-CeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCc
Q psy14726 434 --RCYVSTAVH-H-DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNS 507 (712)
Q Consensus 434 --r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 507 (712)
..-+.++.. + +.+|+.+... ...+++||+.+.+-...-+. ....-++++.. ++.+|+... + ..
T Consensus 139 ~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~-~-----~~ 207 (353)
T 3vgz_A 139 RPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQN-TGKMSTGLALDSEGKRLYTTNA-D-----GE 207 (353)
T ss_dssp CCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECC-CCTTCCCCEEETTTTEEEEECT-T-----SE
T ss_pred CCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecC-CCCccceEEECCCCCEEEEEcC-C-----Ce
Confidence 112334443 3 4677765221 25699999987764332221 12212233333 345777643 2 46
Q ss_pred eEEeeCCCCeeEEeCCCCC--CCcc-eEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE
Q psy14726 508 CEVYDPECNQWTLIEPMRH--RRSG-VSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV 582 (712)
Q Consensus 508 v~~yd~~~~~W~~~~~~p~--~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~ 582 (712)
+..||+.+.+-...-..+. +... .+++.. ++.+|+.+.. ...+..||+.+.+....-..+.+ .+++.
T Consensus 208 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~~~~~---~~~~~ 279 (353)
T 3vgz_A 208 LITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK-----AAEVLVVDTRNGNILAKVAAPES---LAVLF 279 (353)
T ss_dssp EEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-----SSEEEEEETTTCCEEEEEECSSC---CCEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEEcCCC---ceEEE
Confidence 8899998886433322211 1222 223333 4568777642 36899999988775544333333 22333
Q ss_pred E--CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 583 I--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 583 ~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
. ++.+|+.++.+ ..+.+||+.+.+....
T Consensus 280 s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 280 NPARNEAYVTHRQA-----GKVSVIDAKSYKVVKT 309 (353)
T ss_dssp ETTTTEEEEEETTT-----TEEEEEETTTTEEEEE
T ss_pred CCCCCEEEEEECCC-----CeEEEEECCCCeEEEE
Confidence 3 44577776443 3689999998876543
No 69
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.32 E-value=0.00024 Score=65.46 Aligned_cols=91 Identities=20% Similarity=0.313 Sum_probs=71.5
Q ss_pred EEEEecCCcEEeceeeeecccC-HHHHHhhcCCCC----cCCccceEEcCCCCHHHHHHHhhhhccCceecChh-hHHHH
Q psy14726 95 ATIVLADNSHFPIHRNILCACS-DYFRALFTTSLH----DQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITED-NVASL 168 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S-~yF~~mf~~~~~----e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~i~~~-~~~~l 168 (712)
|+|.| +|+.|...+..|.... .+|.+||.+... .... .++.| |=+|..|+.||+|+-+|++.++.+ ....+
T Consensus 14 V~LNV-GG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~-geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~~~~~l 90 (202)
T 3drx_A 14 VRLNV-GGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDET-GAYLI-DRDPTYFGPVLNYLRHGKLVINKDLAEEGV 90 (202)
T ss_dssp EEEEE-TTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTT-CCEEE-CSCSTTHHHHHHHHHHSCCCCCTTSCHHHH
T ss_pred EEEEE-CCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCC-ccEEe-cCChHHHHHHHHHhcCCccCCCCCCCHHHH
Confidence 67788 9999999999998764 488999976421 1123 45666 578999999999999999987654 34678
Q ss_pred HHHhhhcChHHHHHHHHHhh
Q psy14726 169 LLATDFFCMSKAQDLCCDFI 188 (712)
Q Consensus 169 l~~A~~~~i~~L~~~c~~~l 188 (712)
++-|.+|+|++|++.|.+.|
T Consensus 91 ~eEA~FygL~~Lv~~l~~~i 110 (202)
T 3drx_A 91 LEEAEFYNITSLIKLVKDKI 110 (202)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHCCcHHHHHHHHHHH
Confidence 88999999999988887754
No 70
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.32 E-value=0.054 Score=57.68 Aligned_cols=217 Identities=13% Similarity=0.129 Sum_probs=120.8
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH 442 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 442 (712)
..+..+|..+++-... .... ...-.++.. ++..++.|+.+ ..+..||..+++-...-. ........+..
T Consensus 179 g~i~vwd~~~~~~~~~--~~~h-~~~v~~~~~-~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~--~~~~~v~~~~~ 247 (445)
T 2ovr_B 179 RTLKVWNAETGECIHT--LYGH-TSTVRCMHL-HEKRVVSGSRD-----ATLRVWDIETGQCLHVLM--GHVAAVRCVQY 247 (445)
T ss_dssp SCEEEEETTTTEEEEE--ECCC-SSCEEEEEE-ETTEEEEEETT-----SEEEEEESSSCCEEEEEE--CCSSCEEEEEE
T ss_pred CeEEEEECCcCcEEEE--ECCC-CCcEEEEEe-cCCEEEEEeCC-----CEEEEEECCCCcEEEEEc--CCcccEEEEEE
Confidence 3577888887765431 1111 111122333 44556677643 468899988776432211 11222233444
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE 522 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 522 (712)
++..++.|+.+ ..+..||+.+.+-. ..+........+...++..++.|+.++ .+..||..+.+-...
T Consensus 248 ~~~~l~~~~~d-----g~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~- 314 (445)
T 2ovr_B 248 DGRRVVSGAYD-----FMVKVWDPETETCL--HTLQGHTNRVYSLQFDGIHVVSGSLDT-----SIRVWDVETGNCIHT- 314 (445)
T ss_dssp CSSCEEEEETT-----SCEEEEEGGGTEEE--EEECCCSSCEEEEEECSSEEEEEETTS-----CEEEEETTTCCEEEE-
T ss_pred CCCEEEEEcCC-----CEEEEEECCCCcEe--EEecCCCCceEEEEECCCEEEEEeCCC-----eEEEEECCCCCEEEE-
Confidence 77777877754 45888998776532 222222222334445777778887664 588899887653222
Q ss_pred CCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEc-CCCCCCccceEEEEECCEEEEEcccCCCceeee
Q psy14726 523 PMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-PDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYH 601 (712)
Q Consensus 523 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~ 601 (712)
+............++..++.|+.+ ..+..||..+.+-... ............+..++..++.||.++ .
T Consensus 315 -~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg-----~ 383 (445)
T 2ovr_B 315 -LTGHQSLTSGMELKDNILVSGNAD-----STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG-----T 383 (445)
T ss_dssp -ECCCCSCEEEEEEETTEEEEEETT-----SCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTS-----E
T ss_pred -EcCCcccEEEEEEeCCEEEEEeCC-----CeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCC-----e
Confidence 111122233344455566667654 5688999877653322 211112233344555788888888765 6
Q ss_pred EEEEECCCCeEEE
Q psy14726 602 VECYDEKTDEWYE 614 (712)
Q Consensus 602 v~~yd~~~~~W~~ 614 (712)
+.+||..+++...
T Consensus 384 v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 384 VKLWDLKTGEFIR 396 (445)
T ss_dssp EEEEETTTCCEEE
T ss_pred EEEEECCCCceee
Confidence 8899998876543
No 71
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.31 E-value=0.019 Score=59.16 Aligned_cols=190 Identities=14% Similarity=0.075 Sum_probs=107.1
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE--C--CeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--H--DVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
++..++.|+.+ ..+..||....++..+..+...........+ + +.+++.|+.+ ..+..||..+.+|
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~ 91 (379)
T 3jrp_A 22 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRW 91 (379)
T ss_dssp SSSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCEEEEEECC-----CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-----CEEEEEEcCCCce
Confidence 45566677654 3478888877777665544433333333333 2 6777777754 4689999999988
Q ss_pred EEcccCCccccceeEEEE--C--CEEEEEcccCCCCccCceEEeeCCCCeeEEeCCC-CCCCcceEEEEE----------
Q psy14726 472 SLIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-RHRRSGVSCIAY---------- 536 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~~---------- 536 (712)
..+..+........++.+ + +.+++.|+.++ .+..||..+..-...-.+ .....-.++...
T Consensus 92 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 92 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-------
T ss_pred eEeeeecCCCcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccc
Confidence 777555433333344444 3 66777777653 577888776632111001 111111122222
Q ss_pred ----CCEEEEEcCCCCCCccceEEEEeCCCC--cEEEcCCCCCCccceEEEEE--C---CEEEEEcccCCCceeeeEEEE
Q psy14726 537 ----HECIYVIGGFNGMSRMCNGEKYNPVTK--TWSQVPDMYNPRSNFAIEVI--D---DMIFAIGGFNGVTTIYHVECY 605 (712)
Q Consensus 537 ----~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~i~v~GG~~~~~~~~~v~~y 605 (712)
++.+++.|+.+ ..+..||..+. .|..+..+.........+.+ + +.+++.|+.++ .+.+|
T Consensus 167 ~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg-----~i~iw 236 (379)
T 3jrp_A 167 NGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-----TCIIW 236 (379)
T ss_dssp ---CTTCEEEEEETT-----SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS-----CEEEE
T ss_pred cCCCCCCEEEEEeCC-----CeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCC-----EEEEE
Confidence 36777777764 35777877543 35554433322222233333 4 78888888776 46777
Q ss_pred ECCCC
Q psy14726 606 DEKTD 610 (712)
Q Consensus 606 d~~~~ 610 (712)
|..+.
T Consensus 237 d~~~~ 241 (379)
T 3jrp_A 237 TQDNE 241 (379)
T ss_dssp EESST
T ss_pred eCCCC
Confidence 77665
No 72
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.24 E-value=0.062 Score=53.97 Aligned_cols=228 Identities=11% Similarity=0.113 Sum_probs=119.0
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..++.|+.+ ..+..+|..+++....-.. ....-.+++.. ++.+++.|+.+ ..+..||..+++-..
T Consensus 35 ~~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 35 GEWLASSSAD-----KLIKIWGAYDGKFEKTISG---HKLGISDVAWSSDSNLLVSASDD-----KTLKIWDVSSGKCLK 101 (312)
T ss_dssp SSEEEEEETT-----SCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CCEEEEeeCC-----CeEEEEeCCCcccchhhcc---CCCceEEEEEcCCCCEEEEECCC-----CEEEEEECCCCcEEE
Confidence 3455566532 3477788877776542111 11112233333 56777777754 468889988776432
Q ss_pred eCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCC
Q psy14726 427 IAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHN 503 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 503 (712)
.-.-..... .+++. .++..++.|+.+ ..+..||+.+.+-... ++........+.+ ++++++.|+.++
T Consensus 102 ~~~~~~~~v-~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~-- 171 (312)
T 4ery_A 102 TLKGHSNYV-FCCNFNPQSNLIVSGSFD-----ESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDG-- 171 (312)
T ss_dssp EEECCSSCE-EEEEECSSSSEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS--
T ss_pred EEcCCCCCE-EEEEEcCCCCEEEEEeCC-----CcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCCC--
Confidence 211111111 12222 356677777754 3588999887653221 2211122223333 567778887664
Q ss_pred ccCceEEeeCCCCeeEEeC-CCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEc-CCCCCCcc-ceEE
Q psy14726 504 CLNSCEVYDPECNQWTLIE-PMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-PDMYNPRS-NFAI 580 (712)
Q Consensus 504 ~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~-~~~~ 580 (712)
.+..||..+.+....- ....+........-++..++.|+.+ ..+..||..+.+-... ........ ....
T Consensus 172 ---~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 243 (312)
T 4ery_A 172 ---LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD-----NTLKLWDYSKGKCLKTYTGHKNEKYCIFAN 243 (312)
T ss_dssp ---CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETT-----TEEEEEETTTTEEEEEECSSCCSSSCCCEE
T ss_pred ---cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEEEEecCCceEEEEEE
Confidence 5888998877643221 1111111111222256666666654 5788999887653322 11111111 1122
Q ss_pred E-EECCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 581 E-VIDDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 581 ~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
. .-++.+++.||.++ .+.+||..+++
T Consensus 244 ~~~~~~~~l~sg~~dg-----~i~vwd~~~~~ 270 (312)
T 4ery_A 244 FSVTGGKWIVSGSEDN-----LVYIWNLQTKE 270 (312)
T ss_dssp EECSSSCEEEECCTTS-----CEEEEETTTCC
T ss_pred EEeCCCcEEEEECCCC-----EEEEEECCCch
Confidence 2 23677888888765 57888988765
No 73
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.21 E-value=0.045 Score=55.55 Aligned_cols=187 Identities=11% Similarity=0.066 Sum_probs=100.5
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++.+++.|+.+ ..+..+|..+++-...-.............-+++.++.|+.+ ..+..||..+.+-...
T Consensus 91 ~~~~l~s~s~D-----~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d-----g~v~i~~~~~~~~~~~- 159 (321)
T 3ow8_A 91 TLPIAASSSLD-----AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV-----GKVNIFGVESGKKEYS- 159 (321)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT-----SEEEEEETTTCSEEEE-
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC-----CcEEEEEcCCCceeEE-
Confidence 45566777654 468889988876432211111111112223456777777643 4678888877653221
Q ss_pred cCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEe-CCCCCCCcceEEEEECCEEEEEcCCCCCCcc
Q psy14726 476 PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI-EPMRHRRSGVSCIAYHECIYVIGGFNGMSRM 552 (712)
Q Consensus 476 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 552 (712)
+........++.+ +++.++.|+.++ .+..||..+++-... .....+ ....+..-++.+++.|+.+
T Consensus 160 -~~~~~~~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~~~~~~~~~h~~~-v~~l~~spd~~~l~s~s~d----- 227 (321)
T 3ow8_A 160 -LDTRGKFILSIAYSPDGKYLASGAIDG-----IINIFDIATGKLLHTLEGHAMP-IRSLTFSPDSQLLVTASDD----- 227 (321)
T ss_dssp -EECSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECCCSSC-CCEEEECTTSCEEEEECTT-----
T ss_pred -ecCCCceEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcEEEEEcccCCc-eeEEEEcCCCCEEEEEcCC-----
Confidence 1111111222233 677788887664 588899888764322 111111 1111222267777888764
Q ss_pred ceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 553 CNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 553 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
..+..||..+...... +.........+.+ ++..++.||.++ .+.+||..+.+-
T Consensus 228 g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D~-----~v~iwd~~~~~~ 282 (321)
T 3ow8_A 228 GYIKIYDVQHANLAGT--LSGHASWVLNVAFCPDDTHFVSSSSDK-----SVKVWDVGTRTC 282 (321)
T ss_dssp SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEE
T ss_pred CeEEEEECCCcceeEE--EcCCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCEE
Confidence 4688899887654332 1111111222333 677788888765 578888877653
No 74
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.17 E-value=0.019 Score=61.14 Aligned_cols=221 Identities=10% Similarity=0.160 Sum_probs=122.1
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeC
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA 428 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 428 (712)
..++.|+.+ ..+..||..+.+-...-. .......+...++.+++.|+.++ .+..||..+++-...
T Consensus 144 ~~l~~g~~d-----g~i~iwd~~~~~~~~~~~----~h~~~v~~l~~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~- 208 (435)
T 1p22_A 144 QKIVSGLRD-----NTIKIWDKNTLECKRILT----GHTGSVLCLQYDERVIITGSSDS-----TVRVWDVNTGEMLNT- 208 (435)
T ss_dssp SEEEEEESS-----SCEEEEESSSCCEEEEEC----CCSSCEEEEECCSSEEEEEETTS-----CEEEEESSSCCEEEE-
T ss_pred CEEEEEeCC-----CeEEEEeCCCCeEEEEEc----CCCCcEEEEEECCCEEEEEcCCC-----eEEEEECCCCcEEEE-
Confidence 345566532 357888987776543211 11112222333777888888643 588999988765332
Q ss_pred CCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEc-ccCCccccceeEEEECCEEEEEcccCCCCccCc
Q psy14726 429 PMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI-APMNVERSDASATTLQGKIYITGGFNGHNCLNS 507 (712)
Q Consensus 429 ~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 507 (712)
+............++..++.||.+ ..+..||..+..-... ..+........++..++..++.|+.+ ..
T Consensus 209 -~~~h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d-----g~ 277 (435)
T 1p22_A 209 -LIHHCEAVLHLRFNNGMMVTCSKD-----RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD-----RT 277 (435)
T ss_dssp -ECCCCSCEEEEECCTTEEEEEETT-----SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT-----SE
T ss_pred -EcCCCCcEEEEEEcCCEEEEeeCC-----CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCC-----Ce
Confidence 112222233444456677777754 4688888877542211 11111122223344466677777655 35
Q ss_pred eEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEE
Q psy14726 508 CEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMI 587 (712)
Q Consensus 508 v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i 587 (712)
+..||..+.+-... +........++..++..++.|+.+ ..+..||..+.+-... +........++.+++..
T Consensus 278 i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~ 348 (435)
T 1p22_A 278 IKVWNTSTCEFVRT--LNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGACLRV--LEGHEELVRCIRFDNKR 348 (435)
T ss_dssp EEEEETTTCCEEEE--EECCSSCEEEEEEETTEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEECCSSE
T ss_pred EEEEECCcCcEEEE--EcCCCCcEEEEEeCCCEEEEEeCC-----CeEEEEECCCCCEEEE--EeCCcCcEEEEEecCCE
Confidence 88899887653222 221222334444566677777754 5688999887643222 11112223344458888
Q ss_pred EEEcccCCCceeeeEEEEECCC
Q psy14726 588 FAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 588 ~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
++.|+.++ .+.+||..+
T Consensus 349 l~sg~~dg-----~i~vwd~~~ 365 (435)
T 1p22_A 349 IVSGAYDG-----KIKVWDLVA 365 (435)
T ss_dssp EEEEETTS-----CEEEEEHHH
T ss_pred EEEEeCCC-----cEEEEECCC
Confidence 88888765 567777654
No 75
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.15 E-value=0.11 Score=52.47 Aligned_cols=235 Identities=8% Similarity=-0.018 Sum_probs=114.8
Q ss_pred ceEEEEECC--CCcEEEcccCCCCCCCcceEEEEE-CC-EEEEEeecCCCCccceEEEEECCCCc-EEEeCCCCCCccee
Q psy14726 363 DFVETYDTR--ADRWVKIEQVDPMGPRAYHGTAVI-GY-NIYVIGGFDGNEYYNSCRCFNAVTKV-WKEIAPMNFKRCYV 437 (712)
Q Consensus 363 ~~v~~~d~~--~~~W~~~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~~~~r~~~ 437 (712)
..+..|+.. ++++..+.....+. ....+++. ++ .+|+.+. . ...+..||...+. ...+...+....-+
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~-~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 132 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALPG--SLTHISTDHQGQFVFVGSY-N----AGNVSVTRLEDGLPVGVVDVVEGLDGCH 132 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSS--CCSEEEECTTSSEEEEEET-T----TTEEEEEEEETTEEEEEEEEECCCTTBC
T ss_pred CeEEEEEecCCCCceeeccccccCC--CCcEEEEcCCCCEEEEEec-C----CCeEEEEECCCCccccccccccCCCCce
Confidence 466677665 66766532222111 22334443 34 4555543 2 2357888874322 22222222222223
Q ss_pred EEEEE-CC-eEEEEcccCCCCCCceeEEeecCC-CceEEcc--c--CCccccceeEEEE--CC-EEEEEcccCCCCccCc
Q psy14726 438 STAVH-HD-VIYAMGGYNGQRRQNSVEKYNYTE-NQWSLIA--P--MNVERSDASATTL--QG-KIYITGGFNGHNCLNS 507 (712)
Q Consensus 438 ~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~--~--~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~ 507 (712)
.++.. ++ .+|+.+..+ ..+.+||..+ .+...+. . .+.. .....+.+ ++ .+|+.+..+ +.
T Consensus 133 ~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pdg~~l~~~~~~~-----~~ 201 (343)
T 1ri6_A 133 SANISPDNRTLWVPALKQ-----DRICLFTVSDDGHLVAQDPAEVTTVEG-AGPRHMVFHPNEQYAYCVNELN-----SS 201 (343)
T ss_dssp CCEECTTSSEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEEEECSTT-CCEEEEEECTTSSEEEEEETTT-----TE
T ss_pred EEEECCCCCEEEEecCCC-----CEEEEEEecCCCceeeecccccccCCC-CCcceEEECCCCCEEEEEeCCC-----CE
Confidence 33333 34 577765222 4689999887 6665432 1 1211 12222333 44 577776433 45
Q ss_pred eEEeeCC--CCeeEEe---CCCCCC---CcceEEEEE--C-CEEEEEcCCCCCCccceEEEEeCC--CCcEEEcCCCCCC
Q psy14726 508 CEVYDPE--CNQWTLI---EPMRHR---RSGVSCIAY--H-ECIYVIGGFNGMSRMCNGEKYNPV--TKTWSQVPDMYNP 574 (712)
Q Consensus 508 v~~yd~~--~~~W~~~---~~~p~~---r~~~~~~~~--~-~~iyv~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~p~~ 574 (712)
+..||.. +.+++.. ..++.. ......+.+ + ..||+.++. ...+.+||.. +.+++.+...+..
T Consensus 202 i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~-----~~~i~v~d~~~~~~~~~~~~~~~~~ 276 (343)
T 1ri6_A 202 VDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT-----ASLITVFSVSEDGSVLSKEGFQPTE 276 (343)
T ss_dssp EEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT-----TTEEEEEEECTTSCCEEEEEEEECS
T ss_pred EEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC-----CCEEEEEEEcCCCCceEEeeeecCC
Confidence 7778774 4554332 233322 112222233 3 467776643 2567888876 5567666443332
Q ss_pred ccceEEEEE-CC-EEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCccc
Q psy14726 575 RSNFAIEVI-DD-MIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRS 623 (712)
Q Consensus 575 r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 623 (712)
..-.+++.. ++ .+|+.++.++ .-.+|.+|+++++++.+..++.+..
T Consensus 277 ~~~~~~~~s~dg~~l~~~~~~~~---~v~v~~~d~~~g~~~~~~~~~~g~~ 324 (343)
T 1ri6_A 277 TQPRGFNVDHSGKYLIAAGQKSH---HISVYEIVGEQGLLHEKGRYAVGQG 324 (343)
T ss_dssp SSCCCEEECTTSSEEEEECTTTC---EEEEEEEETTTTEEEEEEEEECSSS
T ss_pred CccceEEECCCCCEEEEecCCCC---eEEEEEEcCCCceeeEccccccCCC
Confidence 222223333 44 4665554332 1235666898999988876665433
No 76
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.14 E-value=0.18 Score=49.86 Aligned_cols=194 Identities=10% Similarity=-0.000 Sum_probs=107.0
Q ss_pred EEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCC
Q psy14726 391 GTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTE 468 (712)
Q Consensus 391 ~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~ 468 (712)
++++. ++.+|+.... ...+.+||+. +++...........-++++. -+|.+|+.... ...+.+||+.
T Consensus 19 ~i~~d~~g~l~v~~~~-----~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~- 86 (299)
T 2z2n_A 19 GITVSDKGKVWITQHK-----ANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA-----ANKIGRITKK- 86 (299)
T ss_dssp EEEECTTSCEEEEETT-----TTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-
T ss_pred ceEECCCCCEEEEecC-----CCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC-----CCeEEEECCC-
Confidence 34433 6678876431 2468999998 77766542212223344444 36788887432 2468899986
Q ss_pred CceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcC
Q psy14726 469 NQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGG 545 (712)
Q Consensus 469 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG 545 (712)
.++.... +|..........+ ++++|+....+ ..+.+||+ +++............-.+++.. ++.+|+...
T Consensus 87 g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 87 GIIKEYT-LPNPDSAPYGITEGPNGDIWFTEMNG-----NRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETTT-----TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEET
T ss_pred CcEEEEe-CCCcCCCceeeEECCCCCEEEEecCC-----ceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeC
Confidence 4554443 2211222223333 57899875432 46889998 6665544321111222333333 578888653
Q ss_pred CCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 546 FNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 546 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
. ...+.+||+ +.+............-.+++.- ++.+|+..... ..+.+||+ ++++...
T Consensus 160 ~-----~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~-~g~~~~~ 218 (299)
T 2z2n_A 160 Q-----NNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIG-----NKIGRITT-SGEITEF 218 (299)
T ss_dssp T-----TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTT-----TEEEEECT-TCCEEEE
T ss_pred C-----CCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCC-----ceEEEECC-CCcEEEE
Confidence 2 257899999 7777664211111122233333 57788764322 36889999 7777654
No 77
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.12 E-value=0.028 Score=55.02 Aligned_cols=193 Identities=14% Similarity=0.059 Sum_probs=101.6
Q ss_pred eEEEEE-CCEEEE-EeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-CCeEEEEcccCCCCCCceeEEeec
Q psy14726 390 HGTAVI-GYNIYV-IGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-HDVIYAMGGYNGQRRQNSVEKYNY 466 (712)
Q Consensus 390 ~~~~~~-~~~lyv-~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~ 466 (712)
+++++. ++.+|+ ..+. ...+.+||+.+........... ..-++++.. +|++|+... ...+.+||+
T Consensus 27 ~~i~~~~~g~l~v~~~~~-----~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~------~~~i~~~d~ 94 (270)
T 1rwi_B 27 SGVAVDSAGNVYVTSEGM-----YGRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDF------NNRVVTLAA 94 (270)
T ss_dssp EEEEECTTCCEEEEECSS-----SCEEEEECC-----EECCCCSC-CSCCCEEECTTCCEEEEET------TTEEEEECT
T ss_pred cceEECCCCCEEEEccCC-----CCcEEEecCCCcccceEeeCCc-CCcceeEECCCCCEEEEcC------CCEEEEEeC
Confidence 344443 567888 4331 2468889987766554432211 122334443 578888754 147899999
Q ss_pred CCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEE
Q psy14726 467 TENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVI 543 (712)
Q Consensus 467 ~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~ 543 (712)
.+.......... ........+ +|++|+....+ ..+.+||..+........... ..-.+++.. +++||+.
T Consensus 95 ~~~~~~~~~~~~--~~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~ 166 (270)
T 1rwi_B 95 GSNNQTVLPFDG--LNYPEGLAVDTQGAVYVADRGN-----NRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVT 166 (270)
T ss_dssp TCSCCEECCCCS--CSSEEEEEECTTCCEEEEEGGG-----TEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEE
T ss_pred CCceEeeeecCC--cCCCcceEECCCCCEEEEECCC-----CEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEE
Confidence 887654442211 112223333 67899875432 468888877766544321111 111223333 5789987
Q ss_pred cCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 544 GGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 544 GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
... ...+.+||+....-........ ..-.+++.- ++.+|+....+ ..+.+||+.+..-.
T Consensus 167 ~~~-----~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~~~-----~~v~~~~~~~~~~~ 226 (270)
T 1rwi_B 167 DTD-----NNRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEHNT-----NQVVKLLAGSTTST 226 (270)
T ss_dssp EGG-----GTEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEETTT-----SCEEEECTTCSCCE
T ss_pred ECC-----CCEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEECCC-----CcEEEEcCCCCcce
Confidence 642 2578999998776544322111 122233333 56788875432 25889998776433
No 78
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.12 E-value=0.015 Score=61.67 Aligned_cols=223 Identities=10% Similarity=0.013 Sum_probs=117.6
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCC---CCccee-E
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN---FKRCYV-S 438 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~---~~r~~~-~ 438 (712)
.++.+|+.++.+..+...+.+ ....+++.. ++.+++.|+.+ ..+..+|+.+++.....+.. ...... +
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~ 174 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTG--FQPKSVRFIDNTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEKYKKKLGFVET 174 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECS--SCBCCCEESSSSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHHHHTTCCEEEE
T ss_pred EEEEECCCCCcceEEEEEcCC--CCceEEEEeCCCeEEEEeCCC-----CeEEEEECCCCeEeeecCcccccccCCceeE
Confidence 577778876655443222111 111223333 67888777643 35899999998876543332 111122 2
Q ss_pred EEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCC
Q psy14726 439 TAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPEC 515 (712)
Q Consensus 439 ~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~ 515 (712)
++. -++++++.|+.+ ..+.+||+.+.+....-.. ....-.+++.. +..+|+.|+.+ ..+.+||+.+
T Consensus 175 ~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~~ 243 (433)
T 3bws_A 175 ISIPEHNELWVSQMQA-----NAVHVFDLKTLAYKATVDL-TGKWSKILLYDPIRDLVYCSNWIS-----EDISVIDRKT 243 (433)
T ss_dssp EEEGGGTEEEEEEGGG-----TEEEEEETTTCCEEEEEEC-SSSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTT
T ss_pred EEEcCCCEEEEEECCC-----CEEEEEECCCceEEEEEcC-CCCCeeEEEEcCCCCEEEEEecCC-----CcEEEEECCC
Confidence 222 367888887743 4689999887654322111 11111222222 44677776544 3689999988
Q ss_pred CeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCC---ccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEE
Q psy14726 516 NQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMS---RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFA 589 (712)
Q Consensus 516 ~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~---~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v 589 (712)
++....-+. ...-.+++.. ++..+++++..... .-..+..||+.+.+-......+. ...+++.. ++.+|+
T Consensus 244 ~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~ 319 (433)
T 3bws_A 244 KLEIRKTDK--IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG--NKRHIVSGNTENKIYV 319 (433)
T ss_dssp TEEEEECCC--CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE--CEEEEEECSSTTEEEE
T ss_pred CcEEEEecC--CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC--CcceEEECCCCCEEEE
Confidence 876444322 2222233332 44344444322111 13578999998775443321111 11122222 346888
Q ss_pred EcccCCCceeeeEEEEECCCCeEE
Q psy14726 590 IGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 590 ~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
.++.++ .+.+||+.+++-.
T Consensus 320 ~~~~~~-----~v~v~d~~~~~~~ 338 (433)
T 3bws_A 320 SDMCCS-----KIEVYDLKEKKVQ 338 (433)
T ss_dssp EETTTT-----EEEEEETTTTEEE
T ss_pred EecCCC-----EEEEEECCCCcEE
Confidence 876544 6889999876543
No 79
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.10 E-value=0.22 Score=53.13 Aligned_cols=226 Identities=12% Similarity=0.151 Sum_probs=120.4
Q ss_pred EEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE---CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 350 LFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI---GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 350 i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
.++.|+.+ ..+..+|..+++-... .... ...-.++... ++..++.|+.++ .+..||..+..-..
T Consensus 175 ~l~s~s~d-----g~i~vwd~~~~~~~~~--~~~h-~~~v~~l~~~~~~~~~~l~s~s~d~-----~i~vwd~~~~~~~~ 241 (464)
T 3v7d_B 175 ILVSGSTD-----RTVRVWDIKKGCCTHV--FEGH-NSTVRCLDIVEYKNIKYIVTGSRDN-----TLHVWKLPKESSVP 241 (464)
T ss_dssp EEEEEETT-----SCEEEEETTTTEEEEE--ECCC-SSCEEEEEEEESSSCEEEEEEETTS-----CEEEEECCCCCCC-
T ss_pred EEEEEeCC-----CCEEEEECCCCcEEEE--ECCC-CCccEEEEEecCCCCCEEEEEcCCC-----cEEEeeCCCCcccc
Confidence 45555532 3577889887765432 1111 1112233333 457777777543 47778877654211
Q ss_pred eC---------------------CCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCcccccee
Q psy14726 427 IA---------------------PMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDAS 485 (712)
Q Consensus 427 ~~---------------------~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 485 (712)
.. .+............++..++.|+.+ ..+..||..+.+-... +........
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~--~~~~~~~v~ 314 (464)
T 3v7d_B 242 DHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD-----NTLIVWDVAQMKCLYI--LSGHTDRIY 314 (464)
T ss_dssp -----CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEE
T ss_pred cccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEEE--ecCCCCCEE
Confidence 00 0001111122234456666777654 4588999877654322 111111122
Q ss_pred EEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCC
Q psy14726 486 ATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 486 ~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 563 (712)
.+.+ ++..++.|+.++ .+..||..+++-.. .+.........+..++..++.|+.+ ..+..||..+.
T Consensus 315 ~~~~~~~~~~l~sg~~dg-----~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~l~s~s~d-----g~v~vwd~~~~ 382 (464)
T 3v7d_B 315 STIYDHERKRCISASMDT-----TIRIWDLENGELMY--TLQGHTALVGLLRLSDKFLVSAAAD-----GSIRGWDANDY 382 (464)
T ss_dssp EEEEETTTTEEEEEETTS-----CEEEEETTTTEEEE--EECCCSSCEEEEEECSSEEEEEETT-----SEEEEEETTTC
T ss_pred EEEEcCCCCEEEEEeCCC-----cEEEEECCCCcEEE--EEeCCCCcEEEEEEcCCEEEEEeCC-----CcEEEEECCCC
Confidence 2222 566777777653 58899988775322 2222233344555667777777754 46889998875
Q ss_pred cEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEE
Q psy14726 564 TWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 564 ~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 614 (712)
.-...... .......+...++.+++.|+ ++ .+.+||..+++-..
T Consensus 383 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-dg-----~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 383 SRKFSYHH-TNLSAITTFYVSDNILVSGS-EN-----QFNIYNLRSGKLVH 426 (464)
T ss_dssp CEEEEEEC-TTCCCEEEEEECSSEEEEEE-TT-----EEEEEETTTCCEEE
T ss_pred ceeeeecC-CCCccEEEEEeCCCEEEEec-CC-----eEEEEECCCCcEEe
Confidence 43222111 11222334445777777777 33 68999999887654
No 80
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.07 E-value=0.048 Score=53.34 Aligned_cols=214 Identities=15% Similarity=0.054 Sum_probs=111.6
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..+..+|+.+........... ..-+++++. ++.+|+... ...+++||+.+.....+.... ...-.+++.
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~------~~~i~~~d~~~~~~~~~~~~~-~~~p~~i~~ 115 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNGL---YQPQGLAVDGAGTVYVTDF------NNRVVTLAAGSNNQTVLPFDG-LNYPEGLAV 115 (270)
T ss_dssp CEEEEECC-----EECCCCSC---CSCCCEEECTTCCEEEEET------TTEEEEECTTCSCCEECCCCS-CSSEEEEEE
T ss_pred CcEEEecCCCcccceEeeCCc---CCcceeEECCCCCEEEEcC------CCEEEEEeCCCceEeeeecCC-cCCCcceEE
Confidence 467788887766554322211 122345554 567887754 246899999887655443211 122334444
Q ss_pred E-CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEeeCCCCeeE
Q psy14726 442 H-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWT 519 (712)
Q Consensus 442 ~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 519 (712)
- +|++|+.... ...+.+||..+........... ..-.+++.- ++++|+....+ ..+.+||+.+..-.
T Consensus 116 ~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~~~~~~ 184 (270)
T 1rwi_B 116 DTQGAVYVADRG-----NNRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVTDTDN-----NRVVKLEAESNNQV 184 (270)
T ss_dssp CTTCCEEEEEGG-----GTEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEEEGGG-----TEEEEECTTTCCEE
T ss_pred CCCCCEEEEECC-----CCEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEEECCC-----CEEEEEecCCCceE
Confidence 3 6789987532 2468888877665543321111 111223332 57899876432 46899998877644
Q ss_pred EeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCc
Q psy14726 520 LIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVT 597 (712)
Q Consensus 520 ~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~ 597 (712)
....... ..-.+++.. ++.||+.... ...+.+||+....-...... ....-.+++.- ++.||+....+
T Consensus 185 ~~~~~~~-~~p~~i~~d~~g~l~v~~~~-----~~~v~~~~~~~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~~~~~--- 254 (270)
T 1rwi_B 185 VLPFTDI-TAPWGIAVDEAGTVYVTEHN-----TNQVVKLLAGSTTSTVLPFT-GLNTPLAVAVDSDRTVYVADRGN--- 254 (270)
T ss_dssp ECCCSSC-CSEEEEEECTTCCEEEEETT-----TSCEEEECTTCSCCEECCCC-SCSCEEEEEECTTCCEEEEEGGG---
T ss_pred eecccCC-CCceEEEECCCCCEEEEECC-----CCcEEEEcCCCCcceeeccC-CCCCceeEEECCCCCEEEEECCC---
Confidence 3321111 112233333 4689887643 25689999876543332211 11122333332 57788876543
Q ss_pred eeeeEEEEECCC
Q psy14726 598 TIYHVECYDEKT 609 (712)
Q Consensus 598 ~~~~v~~yd~~~ 609 (712)
+.|.+|++..
T Consensus 255 --~~v~~~~~~~ 264 (270)
T 1rwi_B 255 --DRVVKLTSLE 264 (270)
T ss_dssp --TEEEEECCCG
T ss_pred --CEEEEEcCCC
Confidence 2677777654
No 81
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.05 E-value=0.22 Score=49.04 Aligned_cols=195 Identities=10% Similarity=0.047 Sum_probs=104.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCC----CCcceeEEEE--ECCeEEEEcccCCCCCCceeEEeecCCC
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN----FKRCYVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNYTEN 469 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~----~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 469 (712)
++.+|+.+.. ...+.+||+.......++... ....-.++++ -++++|+.+.. ....+.+||+...
T Consensus 40 ~g~l~v~~~~-----~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~----~~~~i~~~d~~g~ 110 (286)
T 1q7f_A 40 QNDIIVADTN-----NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS----PTHQIQIYNQYGQ 110 (286)
T ss_dssp TCCEEEEEGG-----GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG----GGCEEEEECTTSC
T ss_pred CCCEEEEECC-----CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC----CCCEEEEECCCCc
Confidence 5678877542 246889998855444443211 1122345555 36799998632 1256899996554
Q ss_pred ceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCC
Q psy14726 470 QWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGF 546 (712)
Q Consensus 470 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~ 546 (712)
.-..+.... . .......+ ++++|+....+ ..+.+||+.......+........-.+++.. ++.||+.+..
T Consensus 111 ~~~~~~~~~-~-~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 111 FVRKFGATI-L-QHPRGVTVDNKGRIIVVECKV-----MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp EEEEECTTT-C-SCEEEEEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred EEEEecCcc-C-CCceEEEEeCCCCEEEEECCC-----CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 433332211 1 11222333 67899876432 4689999876655444321111111223322 5789988643
Q ss_pred CCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 547 NGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 547 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
...+.+||+.......+........-.+++.- ++.+|+.+..++ ..+.+||+....-..+
T Consensus 184 -----~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~----~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 184 -----AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN----FNLTIFTQDGQLISAL 244 (286)
T ss_dssp -----GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS----CEEEEECTTSCEEEEE
T ss_pred -----CCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCC----EEEEEECCCCCEEEEE
Confidence 36799999876654544321111112233332 678888764321 1688999876543333
No 82
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.05 E-value=0.092 Score=55.52 Aligned_cols=230 Identities=7% Similarity=-0.068 Sum_probs=126.1
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..+..+|.....-..+... ...-.+.+.. +++.+++++.+++ ...++.+|..+++...+...+. ...+.+.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~----~~~v~~~~~Spdg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~~~~--~~~~~~~ 230 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS----PQPLMSPAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQVASFPR--HNGAPAF 230 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE----SSCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTTCCEEEEECCSS--CEEEEEE
T ss_pred ceEEEEcCCCCCCEEEeCC----CCcceeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCcEEEeecCCC--cccCEEE
Confidence 5788888876544433211 1112223333 5666666665432 2579999999998876654432 2223333
Q ss_pred -ECCe-EEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCe
Q psy14726 442 -HHDV-IYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ 517 (712)
Q Consensus 442 -~~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 517 (712)
-+|+ |++.+..++ ...++.+|+.+.+...+...+ .......+ +|+.+++++..+ ....++.+|..+++
T Consensus 231 spdg~~la~~~~~~g---~~~i~~~d~~~~~~~~l~~~~---~~~~~~~~spdg~~l~~~s~~~--g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 231 SPDGSKLAFALSKTG---SLNLYVMDLASGQIRQVTDGR---SNNTEPTWFPDSQNLAFTSDQA--GRPQVYKVNINGGA 302 (415)
T ss_dssp CTTSSEEEEEECTTS---SCEEEEEETTTCCEEECCCCS---SCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSC
T ss_pred cCCCCEEEEEEecCC---CceEEEEECCCCCEEeCcCCC---CcccceEECCCCCEEEEEECCC--CCcEEEEEECCCCC
Confidence 3555 444443322 357999999998876654322 11222333 565444444321 13478899998877
Q ss_pred eEEeCCCCCCCcceEEEE-ECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCC
Q psy14726 518 WTLIEPMRHRRSGVSCIA-YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNG 595 (712)
Q Consensus 518 W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~ 595 (712)
-..+... .......+. -+++.+++++.++. ...++.+|+.+.+...+.... ...+.+.. +++.+++++.++
T Consensus 303 ~~~l~~~--~~~~~~~~~spdG~~l~~~~~~~g--~~~i~~~d~~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~~ 375 (415)
T 2hqs_A 303 PQRITWE--GSQNQDADVSSDGKFMVMVSSNGG--QQHIAKQDLATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQG 375 (415)
T ss_dssp CEECCCS--SSEEEEEEECTTSSEEEEEEECSS--CEEEEEEETTTCCEEECCCSS---SCEEEEECTTSSEEEEEEEET
T ss_pred EEEEecC--CCcccCeEECCCCCEEEEEECcCC--ceEEEEEECCCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcCC
Confidence 5554321 112222222 25554444443211 357999999999887765432 22223322 667666666544
Q ss_pred CceeeeEEEEECCCCeEEEccC
Q psy14726 596 VTTIYHVECYDEKTDEWYEATD 617 (712)
Q Consensus 596 ~~~~~~v~~yd~~~~~W~~~~~ 617 (712)
. ...++++|+.++....++.
T Consensus 376 ~--~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 376 M--GSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp T--EEEEEEEETTSCCEEECCC
T ss_pred C--ccEEEEEECCCCcEEEeeC
Confidence 3 2378999998887766643
No 83
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.014 Score=67.16 Aligned_cols=241 Identities=11% Similarity=0.199 Sum_probs=126.4
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-C--CEEEEEeecCCCCccceEEEEECCCCcE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-G--YNIYVIGGFDGNEYYNSCRCFNAVTKVW 424 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~--~~lyv~GG~~~~~~~~~v~~yd~~~~~W 424 (712)
+..++.||.+ ..|..||...+.+..+...... ...-.+++.. + +..++.||.++ .+..||..+++|
T Consensus 21 g~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~h-~~~V~~l~~s~~~~~~~l~s~s~Dg-----~I~vwd~~~~~~ 89 (753)
T 3jro_A 21 GKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYDG-----KVLIWKEENGRW 89 (753)
T ss_dssp SCCEEEEETT-----TEEEEEEEETTEEEEEEEECCC-SSCEEEEEECCTTSCSEEEEEETTS-----CEEEEEEETTEE
T ss_pred CCeEEEEECC-----CcEEEEecCCCCCccceeccCC-cCceEEEEecCCCCCCEEEEEeCCC-----eEEEEECCCCcc
Confidence 3355666642 3677888776666553221111 1122233332 3 67778887643 588999999988
Q ss_pred EEeCCCCCCcceeEEEEE--C--CeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-----------
Q psy14726 425 KEIAPMNFKRCYVSTAVH--H--DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL----------- 489 (712)
Q Consensus 425 ~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----------- 489 (712)
..+..+.........+.+ + +.+++.||.+ ..+..||..+..-.....+........++.+
T Consensus 90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-------
T ss_pred cccccccCCCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccc
Confidence 766554433333333333 3 6777888754 4688888776632111111111111112222
Q ss_pred ----CCEEEEEcccCCCCccCceEEeeCCCC--eeEEeCCCCCCCcceEEEEE--C---CEEEEEcCCCCCCccceEEEE
Q psy14726 490 ----QGKIYITGGFNGHNCLNSCEVYDPECN--QWTLIEPMRHRRSGVSCIAY--H---ECIYVIGGFNGMSRMCNGEKY 558 (712)
Q Consensus 490 ----~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~iyv~GG~~~~~~~~~v~~y 558 (712)
++.+++.|+.++ .+..||..++ .+.....+.........+.+ + +.+++.||.+ ..+..|
T Consensus 165 ~~~~d~~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~D-----g~I~iw 234 (753)
T 3jro_A 165 NGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD-----RTCIIW 234 (753)
T ss_dssp --CGGGCCEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESS-----SCEEEE
T ss_pred ccCCCCCEEEEEECCC-----eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecC-----CEEEEe
Confidence 356777777664 4667766543 45544433322222233333 3 6888888865 457788
Q ss_pred eCCCCc--EEEc-CCCC-CCccceEEEE-ECCEEEEEcccCCCceeeeEEEEECC-CCeEEEccCCC
Q psy14726 559 NPVTKT--WSQV-PDMY-NPRSNFAIEV-IDDMIFAIGGFNGVTTIYHVECYDEK-TDEWYEATDMN 619 (712)
Q Consensus 559 d~~~~~--W~~~-~~~p-~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p 619 (712)
|..+.+ +... .... ....-.+++. -++..++.||.++ .+.+||.. .+.|.......
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg-----~I~vwd~~~~~~~~~~~~~~ 296 (753)
T 3jro_A 235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN-----KVTLWKENLEGKWEPAGEVH 296 (753)
T ss_dssp EESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSS-----CEECCBCCSSSCCBCCCCBC
T ss_pred cCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCC-----EEEEEecCCCCCcccccccc
Confidence 877642 1111 1111 1111112222 2677888888765 57788877 46777665443
No 84
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.02 E-value=0.18 Score=58.37 Aligned_cols=238 Identities=10% Similarity=0.089 Sum_probs=132.5
Q ss_pred eEEEEECCCCcEEEcccCC-CC----CCCcceEEEEE-CCE-EEEEeecCCCCccceEEEEECCCCcEEEeCCCCC--C-
Q psy14726 364 FVETYDTRADRWVKIEQVD-PM----GPRAYHGTAVI-GYN-IYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF--K- 433 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~-~~----~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~--~- 433 (712)
-+..||+.++.+....... .+ ....-.+++.. ++. |++ |.. ...+++||+.++++........ +
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~-----~~Gl~~~d~~~~~~~~~~~~~~~l~~ 451 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTH-----AGGLSILHRNSGQVENFNQRNSQLVN 451 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EET-----TTEEEEEETTTCCEEEECTTTSCCSC
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeC-----cCceeEEeCCCCcEEEeecCCCCcCC
Confidence 4778888888887653221 00 11222344443 556 665 332 1358999999999887754211 1
Q ss_pred cceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccC--Ccc--ccceeEEEE--CCEEEEEcccCCCCccC
Q psy14726 434 RCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM--NVE--RSDASATTL--QGKIYITGGFNGHNCLN 506 (712)
Q Consensus 434 r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~--p~~--r~~~~~~~~--~~~iyv~GG~~~~~~~~ 506 (712)
..-.+++. -+|.|++... ..+.+||+.+++|+..... +.. .....+... +|.|++... .
T Consensus 452 ~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------~ 517 (795)
T 4a2l_A 452 ENVYAILPDGEGNLWLGTL-------SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-------E 517 (795)
T ss_dssp SCEEEEEECSSSCEEEEES-------SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-------S
T ss_pred CeeEEEEECCCCCEEEEec-------CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-------C
Confidence 11122222 2567777532 3489999999999877533 111 111122222 577887543 2
Q ss_pred ceEEeeCCCCeeEEeCCC---C-CCC-cceEEEE-ECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC---CCCCCccc
Q psy14726 507 SCEVYDPECNQWTLIEPM---R-HRR-SGVSCIA-YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP---DMYNPRSN 577 (712)
Q Consensus 507 ~v~~yd~~~~~W~~~~~~---p-~~r-~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~ 577 (712)
.+.+||+.++++ ..... + .+- .-.+++. .+|.|++... ..+.+||+.++++.... .+|....
T Consensus 518 Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-------~Gl~~~d~~~~~~~~~~~~~gl~~~~i- 588 (795)
T 4a2l_A 518 GLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-------EGFYCFNEKDKQIKRYNTTNGLPNNVV- 588 (795)
T ss_dssp CEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-------SCEEEEETTTTEEEEECGGGTCSCSCE-
T ss_pred ceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-------CCceeECCCCCcEEEeCCCCCCchhhe-
Confidence 488999999888 44311 1 111 1122222 2577887542 25889999999988763 2333222
Q ss_pred eEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEcc---CCCCcccceEEEEE--cCcceeE
Q psy14726 578 FAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT---DMNIYRSALSACVI--MGLPNVY 637 (712)
Q Consensus 578 ~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~~~~~~--~~~~~v~ 637 (712)
.+++.- +|.|++.+. +.+.+|||+++++.... .++...+...++.. ++.+++.
T Consensus 589 ~~i~~d~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g 647 (795)
T 4a2l_A 589 YGILEDSFGRLWLSTN-------RGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFG 647 (795)
T ss_dssp EEEEECTTSCEEEEET-------TEEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEE
T ss_pred EEEEECCCCCEEEEcC-------CceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEe
Confidence 233322 577877652 25789999999987652 35555443333333 3455554
No 85
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.02 E-value=0.18 Score=51.45 Aligned_cols=226 Identities=11% Similarity=0.127 Sum_probs=113.6
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCc--E
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKV--W 424 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W 424 (712)
+..++.|+.+ ..+..+|..+..-... .+.. ...-.+++.. ++..++.||.+ ..+..||..+.. .
T Consensus 67 ~~~l~s~s~D-----g~v~iWd~~~~~~~~~--~~~~-~~~v~~~~~s~~~~~l~s~~~d-----~~v~iw~~~~~~~~~ 133 (340)
T 1got_B 67 SRLLLSASQD-----GKLIIWDSYTTNKVHA--IPLR-SSWVMTCAYAPSGNYVACGGLD-----NICSIYNLKTREGNV 133 (340)
T ss_dssp SSEEEEEETT-----TEEEEEETTTCCEEEE--EECS-SSCEEEEEECTTSSEEEEEETT-----CEEEEEETTTCSBSC
T ss_pred CCEEEEEeCC-----CcEEEEECCCCCcceE--eecC-CccEEEEEECCCCCEEEEEeCC-----CeEEEEECccCCCcc
Confidence 3455556532 3577888776654331 1111 1111222222 56677778754 457888877643 1
Q ss_pred EEeCCCCCCc-ceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccC
Q psy14726 425 KEIAPMNFKR-CYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFN 500 (712)
Q Consensus 425 ~~~~~~~~~r-~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 500 (712)
.....+.... .-.++.. -++. ++.|+.+ ..+..||+.+.+-... +........++.+ ++++++.||.+
T Consensus 134 ~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d 205 (340)
T 1got_B 134 RVSRELAGHTGYLSCCRFLDDNQ-IVTSSGD-----TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACD 205 (340)
T ss_dssp EEEEEEECCSSCEEEEEEEETTE-EEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eeEEEecCCCccEEEEEECCCCc-EEEEECC-----CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCC
Confidence 1111111111 1112222 3455 4455433 4688899887764322 1111111122223 67788888866
Q ss_pred CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccce
Q psy14726 501 GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNF 578 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 578 (712)
+ .+..||..+..-... +.........+.+ ++..++.|+.+ ..+..||..+.+-...-..+......
T Consensus 206 ~-----~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~v 273 (340)
T 1got_B 206 A-----SAKLWDVREGMCRQT--FTGHESDINAICFFPNGNAFATGSDD-----ATCRLFDLRADQELMTYSHDNIICGI 273 (340)
T ss_dssp S-----CEEEEETTTCSEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred C-----cEEEEECCCCeeEEE--EcCCcCCEEEEEEcCCCCEEEEEcCC-----CcEEEEECCCCcEEEEEccCCcccce
Confidence 4 578888877653222 1111111222222 56777778754 46788998876533221111111222
Q ss_pred EEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 579 AIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 579 ~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
..+.+ ++.+++.|+.++ .+.+||..+..
T Consensus 274 ~~~~~s~~g~~l~~g~~d~-----~i~vwd~~~~~ 303 (340)
T 1got_B 274 TSVSFSKSGRLLLAGYDDF-----NCNVWDALKAD 303 (340)
T ss_dssp EEEEECTTSSEEEEEETTS-----EEEEEETTTCC
T ss_pred EEEEECCCCCEEEEECCCC-----eEEEEEcccCc
Confidence 23333 677888888765 67888876643
No 86
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.96 E-value=0.1 Score=52.89 Aligned_cols=210 Identities=11% Similarity=0.118 Sum_probs=109.1
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..+..+|..+++-...-... +....+++.. ++..++.|+.+ ..+..||..+++-...-.... ..-.+++.
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~---~~~~~~~~~spdg~~l~~g~~d-----g~v~i~~~~~~~~~~~~~~~~-~~v~~~~~ 172 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAG---PVDAWTLAFSPDSQYLATGTHV-----GKVNIFGVESGKKEYSLDTRG-KFILSIAY 172 (321)
T ss_dssp SEEEEEETTTTEEEEEEECC---TTCCCCEEECTTSSEEEEECTT-----SEEEEEETTTCSEEEEEECSS-SCEEEEEE
T ss_pred CcEEEEECCCCCEEEEEeCC---CccEEEEEECCCCCEEEEEcCC-----CcEEEEEcCCCceeEEecCCC-ceEEEEEE
Confidence 36778888877644311111 1111223333 56667777643 457888887765432211111 11122222
Q ss_pred -ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCee
Q psy14726 442 -HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQW 518 (712)
Q Consensus 442 -~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 518 (712)
.+++.++.|+.+ ..+..||..+.+-... +........++.+ ++++++.|+.++ .+..||..+...
T Consensus 173 spdg~~lasg~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spd~~~l~s~s~dg-----~i~iwd~~~~~~ 240 (321)
T 3ow8_A 173 SPDGKYLASGAID-----GIINIFDIATGKLLHT--LEGHAMPIRSLTFSPDSQLLVTASDDG-----YIKIYDVQHANL 240 (321)
T ss_dssp CTTSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCCCEEEECTTSCEEEEECTTS-----CEEEEETTTCCE
T ss_pred CCCCCEEEEEcCC-----CeEEEEECCCCcEEEE--EcccCCceeEEEEcCCCCEEEEEcCCC-----eEEEEECCCcce
Confidence 367777887754 4588999887753221 1111111122333 677888887664 588888877654
Q ss_pred EEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccC
Q psy14726 519 TLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFN 594 (712)
Q Consensus 519 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 594 (712)
... +.........+.+ ++..++.|+.+ ..+..||..+.+-... +.........+.+ ++..++.||.+
T Consensus 241 ~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~~--~~~h~~~v~~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 241 AGT--LSGHASWVLNVAFCPDDTHFVSSSSD-----KSVKVWDVGTRTCVHT--FFDHQDQVWGVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp EEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEE--EcCCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCEEEEE--EcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 322 1111122222223 56677777754 4688899887643322 1111112222233 56677788876
Q ss_pred CCceeeeEEEEEC
Q psy14726 595 GVTTIYHVECYDE 607 (712)
Q Consensus 595 ~~~~~~~v~~yd~ 607 (712)
+ .+.+||.
T Consensus 312 ~-----~i~vwd~ 319 (321)
T 3ow8_A 312 Q-----EIHIYDC 319 (321)
T ss_dssp C-----CEEEEEC
T ss_pred C-----eEEEEeC
Confidence 5 4566663
No 87
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.96 E-value=0.056 Score=62.52 Aligned_cols=211 Identities=9% Similarity=0.041 Sum_probs=120.3
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCC----Cccee
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF----KRCYV 437 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~----~r~~~ 437 (712)
..+..||+.++++..+.....+ ...-.+++.. ++.|++... ..+++||+.+++|......+. ...-.
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~-~~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~ 498 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNE-LLDVRVFYEDKNKKIWIGTH-------AGVFVIDLASKKVIHHYDTSNSQLLENFVR 498 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTC-CCCEEEEEECTTSEEEEEET-------TEEEEEESSSSSCCEEECTTTSSCSCSCEE
T ss_pred CCEEEEcCCCCcEEEeccCCCC-CCeEEEEEECCCCCEEEEEC-------CceEEEeCCCCeEEecccCcccccccceeE
Confidence 3578899988888875322111 1222233333 567776432 458999999999876643321 11112
Q ss_pred EEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCC-ccccceeEEEE--CCEEEEEcccCCCCccCce-EEee
Q psy14726 438 STAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMN-VERSDASATTL--QGKIYITGGFNGHNCLNSC-EVYD 512 (712)
Q Consensus 438 ~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v-~~yd 512 (712)
+++. -+|.|++... . .-+++||+.+++++...... .+.....+... +|.|++... +-+ .+||
T Consensus 499 ~i~~d~~g~lWigt~-~-----~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-------~Glv~~~d 565 (781)
T 3v9f_A 499 SIAQDSEGRFWIGTF-G-----GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-------EGLVCFPS 565 (781)
T ss_dssp EEEECTTCCEEEEES-S-----SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-------TEEEEESC
T ss_pred EEEEcCCCCEEEEEc-C-----CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-------CCceEEEC
Confidence 2222 3567877421 1 24889999999988764311 11111112222 577887532 236 8999
Q ss_pred CCCCeeEEeC---CCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC---CCCCCccceEEE-EE-
Q psy14726 513 PECNQWTLIE---PMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP---DMYNPRSNFAIE-VI- 583 (712)
Q Consensus 513 ~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~~~~-~~- 583 (712)
+.+++++... .+|.... .+++.. +|.|++.+. ..+.+|||.+.++.... .++.......++ ..
T Consensus 566 ~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~ 637 (781)
T 3v9f_A 566 ARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-------TGISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDH 637 (781)
T ss_dssp TTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-------SCEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECT
T ss_pred CCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC-------CceEEEECCCCceEEecccCCccccccccCceEECC
Confidence 9999888775 3443332 233333 578888763 46889999999888763 244333332333 33
Q ss_pred CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 584 DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 584 ~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
+|.|| +||.+| +..|||+.
T Consensus 638 ~G~l~-~g~~~G------l~~f~p~~ 656 (781)
T 3v9f_A 638 NGLIY-FGSING------LCFFNPDI 656 (781)
T ss_dssp TSCEE-EEETTE------EEEECSCC
T ss_pred CCEEE-EECCCc------eEEEChhh
Confidence 45554 466543 66777764
No 88
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.96 E-value=0.22 Score=51.00 Aligned_cols=250 Identities=8% Similarity=0.043 Sum_probs=115.1
Q ss_pred ceEEEEeecCCCCCC-ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcE
Q psy14726 348 EILFAIGGWSGGSPT-DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVW 424 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~-~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 424 (712)
...+++|.+..+... -.++.+|+.++++..+.......|+ .+++. +..||+.+........-.+|.+|..+++.
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~---~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~ 89 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPS---YLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTL 89 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCC---SEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCc---eEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcE
Confidence 445667876543221 1355667888887765332111122 23333 34566665432111122346667766777
Q ss_pred EEeCCCCC-CcceeEEEEECC-eEEEEcccCCCCCCceeEEeecCCCc-eEEcc-------cCCcc----ccc-eeEEEE
Q psy14726 425 KEIAPMNF-KRCYVSTAVHHD-VIYAMGGYNGQRRQNSVEKYNYTENQ-WSLIA-------PMNVE----RSD-ASATTL 489 (712)
Q Consensus 425 ~~~~~~~~-~r~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~-------~~p~~----r~~-~~~~~~ 489 (712)
..+...+. ......++. ++ .+|+.+.. ...+.+|+..++. ...+. .-+.+ ... |+++.-
T Consensus 90 ~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~-----~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~s 163 (361)
T 3scy_A 90 HLLNTQKTMGADPCYLTT-NGKNIVTANYS-----GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRIT 163 (361)
T ss_dssp EEEEEEECSSSCEEEEEE-CSSEEEEEETT-----TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEEC
T ss_pred EEeeEeccCCCCcEEEEE-CCCEEEEEECC-----CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEEC
Confidence 76654432 222233344 55 46655421 2467888875432 11110 01110 111 223322
Q ss_pred -CC-EEEEEcccCCCCccCceEEeeCCCCe-------eEEe-----CCCCCCCcceEEEEE-CC-EEEEEcCCCCCCccc
Q psy14726 490 -QG-KIYITGGFNGHNCLNSCEVYDPECNQ-------WTLI-----EPMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMC 553 (712)
Q Consensus 490 -~~-~iyv~GG~~~~~~~~~v~~yd~~~~~-------W~~~-----~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~ 553 (712)
++ .+|+.+..+ +.+.+|+..... .... ...+....-..++.. ++ .+|+.+.. ..
T Consensus 164 pdg~~l~~~~~~~-----~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-----~~ 233 (361)
T 3scy_A 164 PDGKYLLADDLGT-----DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI-----GG 233 (361)
T ss_dssp TTSSEEEEEETTT-----TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----TC
T ss_pred CCCCEEEEEeCCC-----CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-----CC
Confidence 55 477765322 356677554433 2111 112211111222222 44 57777632 25
Q ss_pred eEEEEeCCCCcEEEcC---CCCCCccceEEEEE--CCE-EEEEcccCCCceeeeEEEEE--CCCCeEEEccCCCC
Q psy14726 554 NGEKYNPVTKTWSQVP---DMYNPRSNFAIEVI--DDM-IFAIGGFNGVTTIYHVECYD--EKTDEWYEATDMNI 620 (712)
Q Consensus 554 ~v~~yd~~~~~W~~~~---~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd--~~~~~W~~~~~~p~ 620 (712)
.+.+||..++++..+. ..+........+.+ +++ ||+.+.... +.+.+|+ +.++++..+..++.
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~----~~i~v~~~~~~~g~~~~~~~~~~ 304 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKA----DGVAIFKVDETNGTLTKVGYQLT 304 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSS----CEEEEEEECTTTCCEEEEEEEEC
T ss_pred eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCC----CEEEEEEEcCCCCcEEEeeEecC
Confidence 6888888877765543 22322222333333 454 555432201 2345554 46778776654443
No 89
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.95 E-value=0.045 Score=58.21 Aligned_cols=186 Identities=12% Similarity=0.114 Sum_probs=105.6
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++..++.|+.+ ..+..||..+.+-... +........+...++.+++.|+.+ ..+.+||..+.+-...
T Consensus 142 d~~~l~~g~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~- 208 (435)
T 1p22_A 142 DDQKIVSGLRD-----NTIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSD-----STVRVWDVNTGEMLNT- 208 (435)
T ss_dssp CSSEEEEEESS-----SCEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETT-----SCEEEEESSSCCEEEE-
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeEEEE--EcCCCCcEEEEEECCCEEEEEcCC-----CeEEEEECCCCcEEEE-
Confidence 56677777754 3588899887764332 111222333444588888888854 4588999888764322
Q ss_pred cCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEe-CCCCCCCcceEEEEECCEEEEEcCCCCCCccce
Q psy14726 476 PMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLI-EPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCN 554 (712)
Q Consensus 476 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 554 (712)
+........+...++..++.||.++ .+..||..+..-... ..+........++..++..++.|+.+ ..
T Consensus 209 -~~~h~~~v~~l~~~~~~l~s~s~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d-----g~ 277 (435)
T 1p22_A 209 -LIHHCEAVLHLRFNNGMMVTCSKDR-----SIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD-----RT 277 (435)
T ss_dssp -ECCCCSCEEEEECCTTEEEEEETTS-----CEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT-----SE
T ss_pred -EcCCCCcEEEEEEcCCEEEEeeCCC-----cEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCC-----Ce
Confidence 2222222333344566777777654 578888876542211 11111222333344466666666653 56
Q ss_pred EEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 555 GEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 555 v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
+..||..+.+-... +........+...++..++.|+.++ .+.+||..+++-
T Consensus 278 i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~g~~dg-----~i~iwd~~~~~~ 328 (435)
T 1p22_A 278 IKVWNTSTCEFVRT--LNGHKRGIACLQYRDRLVVSGSSDN-----TIRLWDIECGAC 328 (435)
T ss_dssp EEEEETTTCCEEEE--EECCSSCEEEEEEETTEEEEEETTS-----CEEEEETTTCCE
T ss_pred EEEEECCcCcEEEE--EcCCCCcEEEEEeCCCEEEEEeCCC-----eEEEEECCCCCE
Confidence 88999887643322 1111222334445677888888765 578899887643
No 90
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.92 E-value=0.085 Score=60.93 Aligned_cols=238 Identities=9% Similarity=0.037 Sum_probs=134.0
Q ss_pred eEEEEECCCCcEEEcccC-CCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCC-cceeEEE
Q psy14726 364 FVETYDTRADRWVKIEQV-DPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFK-RCYVSTA 440 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~-~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~-r~~~~~~ 440 (712)
.+..||+.++.+...... .++ ...-.+++.. ++.|++ |.. ...+++||+.++++........+ ..-.+++
T Consensus 384 Gl~~~~~~~~~~~~~~~~~~~~-~~~v~~i~~d~~g~lWi-gt~-----~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~ 456 (781)
T 3v9f_A 384 GINVFENGKRVAIYNKENRELL-SNSVLCSLKDSEGNLWF-GTY-----LGNISYYNTRLKKFQIIELEKNELLDVRVFY 456 (781)
T ss_dssp CEEEEETTEEEEECC-----CC-CSBEEEEEECTTSCEEE-EET-----TEEEEEECSSSCEEEECCSTTTCCCCEEEEE
T ss_pred cEEEEECCCCeEEEccCCCCCC-CcceEEEEECCCCCEEE-Eec-----cCCEEEEcCCCCcEEEeccCCCCCCeEEEEE
Confidence 377888887776653211 111 1122233333 567776 332 14589999999999887542111 1222333
Q ss_pred EE-CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCc---cccceeEEEE--CCEEEEEcccCCCCccCceEEeeCC
Q psy14726 441 VH-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNV---ERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPE 514 (712)
Q Consensus 441 ~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~---~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 514 (712)
.- +|.|++... .-+++||+.+++|......+. ......+... +|.|++... . ..+.+||+.
T Consensus 457 ~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-----~Gl~~~~~~ 523 (781)
T 3v9f_A 457 EDKNKKIWIGTH-------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-G-----GGVGIYTPD 523 (781)
T ss_dssp ECTTSEEEEEET-------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-S-----SCEEEECTT
T ss_pred ECCCCCEEEEEC-------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-C-----CCEEEEeCC
Confidence 32 567777422 458999999999876643321 1111112222 577887431 1 238899999
Q ss_pred CCeeEEeCC---CCCCCcceEEEE-ECCEEEEEcCCCCCCccceE-EEEeCCCCcEEEcC---CCCCCccceEEEEE-CC
Q psy14726 515 CNQWTLIEP---MRHRRSGVSCIA-YHECIYVIGGFNGMSRMCNG-EKYNPVTKTWSQVP---DMYNPRSNFAIEVI-DD 585 (712)
Q Consensus 515 ~~~W~~~~~---~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v-~~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~ 585 (712)
+++++.... ++.... .+++. -++.|++... ..+ .+||+.++++.... .+|.... .+++.- +|
T Consensus 524 ~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g 594 (781)
T 3v9f_A 524 MQLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNG 594 (781)
T ss_dssp CCEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET-------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSS
T ss_pred CCeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC-------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCC
Confidence 999988753 222111 12222 2577887643 346 89999998887763 2343332 333333 67
Q ss_pred EEEEEcccCCCceeeeEEEEECCCCeEEEc---cCCCCcccceEEEEE--cCcceeE
Q psy14726 586 MIFAIGGFNGVTTIYHVECYDEKTDEWYEA---TDMNIYRSALSACVI--MGLPNVY 637 (712)
Q Consensus 586 ~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~---~~~p~~r~~~~~~~~--~~~~~v~ 637 (712)
.|++.+. + .+.+|||+++++... ..++...+...++.. ++.+++.
T Consensus 595 ~lW~~t~-~------Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g 644 (781)
T 3v9f_A 595 NIWASTN-T------GISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFG 644 (781)
T ss_dssp CEEEECS-S------CEEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEEE
T ss_pred CEEEEcC-C------ceEEEECCCCceEEecccCCccccccccCceEECCCCEEEEE
Confidence 7877642 2 478899999998776 335555544444444 3555554
No 91
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.92 E-value=0.23 Score=56.09 Aligned_cols=203 Identities=14% Similarity=0.153 Sum_probs=115.4
Q ss_pred EEEECCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCCC--------cceeEEEEECCeEEEEcccCCCCCCcee
Q psy14726 392 TAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFK--------RCYVSTAVHHDVIYAMGGYNGQRRQNSV 461 (712)
Q Consensus 392 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~v 461 (712)
-++.++.||+... ...++.+|..+++ |+.-...+.. ....+.++.+++||+... ...+
T Consensus 73 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg~l 140 (677)
T 1kb0_A 73 PVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DGRL 140 (677)
T ss_dssp CEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CCEE
Confidence 3556999998865 2569999998876 8765433211 112345668899998643 2569
Q ss_pred EEeecCCCc--eEEccc-C-Cc-cccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCe--eEEeCCCCCC---C---
Q psy14726 462 EKYNYTENQ--WSLIAP-M-NV-ERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIEPMRHR---R--- 528 (712)
Q Consensus 462 ~~yd~~~~~--W~~~~~-~-p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~---r--- 528 (712)
+.+|..|.+ |+.-.. - +. .....+.++.++.+|+..+.........+..||..|++ |+.-...+.. .
T Consensus 141 ~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~ 220 (677)
T 1kb0_A 141 IALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDE 220 (677)
T ss_dssp EEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSH
T ss_pred EEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccc
Confidence 999998765 875432 1 11 11222345568888875543222234679999998876 8765422210 0
Q ss_pred -------------------cc----eEEEE--ECCEEEEEcCCC-------------CCCccceEEEEeCCCC--cEEEc
Q psy14726 529 -------------------SG----VSCIA--YHECIYVIGGFN-------------GMSRMCNGEKYNPVTK--TWSQV 568 (712)
Q Consensus 529 -------------------~~----~~~~~--~~~~iyv~GG~~-------------~~~~~~~v~~yd~~~~--~W~~~ 568 (712)
.+ ...+. -++.||+-.|.. +......+..+|+.+. .|..-
T Consensus 221 ~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~ 300 (677)
T 1kb0_A 221 SMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQ 300 (677)
T ss_dssp HHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEE
T ss_pred ccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEe
Confidence 00 11222 257788766531 1122457999999886 48753
Q ss_pred CCCCC---C--ccceEEE--EECC---EEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 569 PDMYN---P--RSNFAIE--VIDD---MIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 569 ~~~p~---~--r~~~~~~--~~~~---~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
..... - -....++ ..++ .++++|..++ .++++|..+++
T Consensus 301 ~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G-----~l~~lD~~tG~ 348 (677)
T 1kb0_A 301 ETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNG-----FFFVLDRTNGK 348 (677)
T ss_dssp SSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTS-----EEEEEETTTCC
T ss_pred cCCCcccccccCCCcEEEecccCCcEeeEEEEECCCC-----EEEEEECCCCC
Confidence 21100 0 0111222 1255 5677776554 57778877764
No 92
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.90 E-value=0.084 Score=55.34 Aligned_cols=227 Identities=13% Similarity=0.118 Sum_probs=114.3
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcE--E
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVW--K 425 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W--~ 425 (712)
+..++.|+.+ ..+..||..+++.... .. ...........++.+++.|+.+ ..+..||..+..- .
T Consensus 146 ~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~--~~~~~v~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~ 211 (401)
T 4aez_A 146 GSFLSVGLGN-----GLVDIYDVESQTKLRT--MA--GHQARVGCLSWNRHVLSSGSRS-----GAIHHHDVRIANHQIG 211 (401)
T ss_dssp SSEEEEEETT-----SCEEEEETTTCCEEEE--EC--CCSSCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEE
T ss_pred CCEEEEECCC-----CeEEEEECcCCeEEEE--ec--CCCCceEEEEECCCEEEEEcCC-----CCEEEEecccCcceee
Confidence 3455555532 3578889887765442 11 1111222223356677777754 4688899874331 1
Q ss_pred EeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE---CCEEEEEcccCC
Q psy14726 426 EIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL---QGKIYITGGFNG 501 (712)
Q Consensus 426 ~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~ 501 (712)
.+..- ...-.+++. -++..++.|+.+ ..+.+||..+.+-... +........+..+ +..+++.||...
T Consensus 212 ~~~~~--~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~ll~~~~gs~ 282 (401)
T 4aez_A 212 TLQGH--SSEVCGLAWRSDGLQLASGGND-----NVVQIWDARSSIPKFT--KTNHNAAVKAVAWCPWQSNLLATGGGTM 282 (401)
T ss_dssp EEECC--SSCEEEEEECTTSSEEEEEETT-----SCEEEEETTCSSEEEE--ECCCSSCCCEEEECTTSTTEEEEECCTT
T ss_pred EEcCC--CCCeeEEEEcCCCCEEEEEeCC-----CeEEEccCCCCCccEE--ecCCcceEEEEEECCCCCCEEEEecCCC
Confidence 22111 111122222 266778888754 4688999887543221 1111111222333 446777765211
Q ss_pred CCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC-EEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccce-
Q psy14726 502 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNF- 578 (712)
Q Consensus 502 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~- 578 (712)
-..+..||..+.+-...-.... .-.+++.. ++ .+++.+|.. -..+..||..+........++......
T Consensus 283 ---d~~i~i~d~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~g~~----dg~i~v~~~~~~~~~~~~~~~~h~~~v~ 353 (401)
T 4aez_A 283 ---DKQIHFWNAATGARVNTVDAGS--QVTSLIWSPHSKEIMSTHGFP----DNNLSIWSYSSSGLTKQVDIPAHDTRVL 353 (401)
T ss_dssp ---TCEEEEEETTTCCEEEEEECSS--CEEEEEECSSSSEEEEEECTT----TCEEEEEEEETTEEEEEEEEECCSSCCC
T ss_pred ---CCEEEEEECCCCCEEEEEeCCC--cEEEEEECCCCCeEEEEeecC----CCcEEEEecCCccceeEEEecCCCCCEE
Confidence 2468899988776433222111 11222222 33 455554432 256888888877666653332221111
Q ss_pred EEEEE-CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 579 AIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 579 ~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
+++.. ++..++.||.++ .+.+||..+++
T Consensus 354 ~~~~s~dg~~l~s~~~dg-----~i~iw~~~~~~ 382 (401)
T 4aez_A 354 YSALSPDGRILSTAASDE-----NLKFWRVYDGD 382 (401)
T ss_dssp EEEECTTSSEEEEECTTS-----EEEEEECCC--
T ss_pred EEEECCCCCEEEEEeCCC-----cEEEEECCCCc
Confidence 22222 677788888765 67888887765
No 93
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.89 E-value=0.39 Score=47.25 Aligned_cols=230 Identities=10% Similarity=0.055 Sum_probs=119.3
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCC-C-CCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCc
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDP-M-GPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKV 423 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~-~-~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 423 (712)
+.+++.+.. ...|..||+.......+..... + ....-.++++. ++.+|+.+.. ....+.+||+....
T Consensus 41 g~l~v~~~~-----~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~----~~~~i~~~d~~g~~ 111 (286)
T 1q7f_A 41 NDIIVADTN-----NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS----PTHQIQIYNQYGQF 111 (286)
T ss_dssp CCEEEEEGG-----GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG----GGCEEEEECTTSCE
T ss_pred CCEEEEECC-----CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC----CCCEEEEECCCCcE
Confidence 456655432 2358888887544333321111 1 11223455553 6789988642 12468999965544
Q ss_pred EEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccC
Q psy14726 424 WKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFN 500 (712)
Q Consensus 424 W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 500 (712)
...+.... ...-.++++ -+|++|+.... ...+.+||+.......+.... .........+ ++++|+.+..
T Consensus 112 ~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~~~~- 183 (286)
T 1q7f_A 112 VRKFGATI-LQHPRGVTVDNKGRIIVVECK-----VMRVIIFDQNGNVLHKFGCSK-HLEFPNGVVVNDKQEIFISDNR- 183 (286)
T ss_dssp EEEECTTT-CSCEEEEEECTTSCEEEEETT-----TTEEEEECTTSCEEEEEECTT-TCSSEEEEEECSSSEEEEEEGG-
T ss_pred EEEecCcc-CCCceEEEEeCCCCEEEEECC-----CCEEEEEcCCCCEEEEeCCCC-ccCCcEEEEECCCCCEEEEECC-
Confidence 44443221 112234444 36789987542 257899998766544442211 1112233333 5889997643
Q ss_pred CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceE
Q psy14726 501 GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFA 579 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 579 (712)
.+.+.+||+.......+..-.....-.+++.. ++.||+....++ ..+.+||+....-..+..........+
T Consensus 184 ----~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~----~~i~~~~~~g~~~~~~~~~~~~~~~~~ 255 (286)
T 1q7f_A 184 ----AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN----FNLTIFTQDGQLISALESKVKHAQCFD 255 (286)
T ss_dssp ----GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS----CEEEEECTTSCEEEEEEESSCCSCEEE
T ss_pred ----CCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCC----EEEEEECCCCCEEEEEcccCCCCccee
Confidence 25699999876655555321111111233332 578998875321 278999986554333322111111223
Q ss_pred EEEE-CCEEEEEcccCCCceeeeEEEEECC
Q psy14726 580 IEVI-DDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 580 ~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
++.- ++++|+.. .+ +.+.+|+..
T Consensus 256 i~~~~~g~l~vs~-~~-----~~v~v~~~~ 279 (286)
T 1q7f_A 256 VALMDDGSVVLAS-KD-----YRLYIYRYV 279 (286)
T ss_dssp EEEETTTEEEEEE-TT-----TEEEEEECS
T ss_pred EEECCCCcEEEEC-CC-----CeEEEEEcc
Confidence 4333 78888884 22 256666653
No 94
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.89 E-value=0.083 Score=55.74 Aligned_cols=241 Identities=13% Similarity=0.016 Sum_probs=121.9
Q ss_pred CceEEEEeecCCCCCCceEEEEECCCCcEEEcccC-CCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCc
Q psy14726 347 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQV-DPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKV 423 (712)
Q Consensus 347 ~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~-~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 423 (712)
.+.+++.++.+ ..+..+|..+++....... ....+......... ++.+|+.|+.+ ..+..||+.+.+
T Consensus 133 ~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d-----~~v~~~d~~~~~ 202 (433)
T 3bws_A 133 NTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA-----NAVHVFDLKTLA 202 (433)
T ss_dssp SSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG-----TEEEEEETTTCC
T ss_pred CCeEEEEeCCC-----CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC-----CEEEEEECCCce
Confidence 34555555422 3588899988876652111 11111112222233 77888887743 468999998876
Q ss_pred EEEeCCCCCCcceeEEEEE-C-CeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEccc
Q psy14726 424 WKEIAPMNFKRCYVSTAVH-H-DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGF 499 (712)
Q Consensus 424 W~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 499 (712)
....-.... ..-.+++.. + +.+|+.|+.+ ..+.+||+.+.+....-+. ... ...+.+ +++.+++++.
T Consensus 203 ~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~--~~~-~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 203 YKATVDLTG-KWSKILLYDPIRDLVYCSNWIS-----EDISVIDRKTKLEIRKTDK--IGL-PRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp EEEEEECSS-SSEEEEEEETTTTEEEEEETTT-----TEEEEEETTTTEEEEECCC--CSE-EEEEEECTTSSEEEEEEE
T ss_pred EEEEEcCCC-CCeeEEEEcCCCCEEEEEecCC-----CcEEEEECCCCcEEEEecC--CCC-ceEEEEcCCCCEEEEEEC
Confidence 433221111 122233333 3 3576766432 4799999988765433222 111 223333 4544444443
Q ss_pred CCCC---ccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-C-CEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCC
Q psy14726 500 NGHN---CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-H-ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 574 (712)
Q Consensus 500 ~~~~---~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 574 (712)
.... .-..+..||+.+++-......+. ....++.. + +.+|+.++.+ ..+..||..+.+-...- +..
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~~~~~~-----~~v~v~d~~~~~~~~~~--~~~ 344 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLIDTIGPPG--NKRHIVSGNTENKIYVSDMCC-----SKIEVYDLKEKKVQKSI--PVF 344 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEEEEEEEEE--CEEEEEECSSTTEEEEEETTT-----TEEEEEETTTTEEEEEE--ECS
T ss_pred CCCccccCCCeEEEEECCCCcEEeeccCCC--CcceEEECCCCCEEEEEecCC-----CEEEEEECCCCcEEEEe--cCC
Confidence 2211 13578899998876443321111 11122222 3 3788887643 57899999876543321 112
Q ss_pred ccceEEEEE-CCEEEEEcccCCCc----------eeeeEEEEECCCCeEEEc
Q psy14726 575 RSNFAIEVI-DDMIFAIGGFNGVT----------TIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 575 r~~~~~~~~-~~~i~v~GG~~~~~----------~~~~v~~yd~~~~~W~~~ 615 (712)
....+++.. +++.+++++..... .-..+++||+.+.+....
T Consensus 345 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 345 DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 222233333 45444444432210 012689999988775543
No 95
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.88 E-value=0.44 Score=48.25 Aligned_cols=201 Identities=7% Similarity=-0.022 Sum_probs=104.1
Q ss_pred CCEEEEEeecCC-CCccceEEEEECCCCcEEEeCCCCCCcceeEEE-EECC-eEEEEcccCCCCCCceeEEeecCCCceE
Q psy14726 396 GYNIYVIGGFDG-NEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA-VHHD-VIYAMGGYNGQRRQNSVEKYNYTENQWS 472 (712)
Q Consensus 396 ~~~lyv~GG~~~-~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 472 (712)
++.+|+...... ......++.+|+.+++....-+.... .++++ .-++ .+|+.++.+ +.+.+||+.+.+-.
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~ 124 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLK--PFGATINNTTQTLWFGNTVN-----SAVTAIDAKTGEVK 124 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSC--CCSEEEETTTTEEEEEETTT-----TEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCC--cceEEECCCCCEEEEEecCC-----CEEEEEeCCCCeeE
Confidence 457776653211 11245799999998875433222211 22233 3344 588776532 47999999887643
Q ss_pred EcccCCccc--------cceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEE-E-CCEE
Q psy14726 473 LIAPMNVER--------SDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIA-Y-HECI 540 (712)
Q Consensus 473 ~~~~~p~~r--------~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~-~~~i 540 (712)
..-+.+... .-++++.- ++.+|+.+... ...++.||+.+.+-...-+... ....+++. - ++.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 125 GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQNTG-KMSTGLALDSEGKRL 199 (353)
T ss_dssp EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECCCC-TTCCCCEEETTTTEE
T ss_pred EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecCCC-CccceEEECCCCCEE
Confidence 322222111 01223332 45688776322 2469999998876433322111 11122222 2 3567
Q ss_pred EEEcCCCCCCccceEEEEeCCCCcEEEcCCC--CCCccc-eEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 541 YVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM--YNPRSN-FAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 541 yv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~--p~~r~~-~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
|+... ...+..||+.+.+-...... ..+... .+++.. ++.+|+.+..+ ..+.+||+.+++....
T Consensus 200 ~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 200 YTTNA------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKA-----AEVLVVDTRNGNILAK 268 (353)
T ss_dssp EEECT------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSS-----SEEEEEETTTCCEEEE
T ss_pred EEEcC------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEE
Confidence 77654 25788999988754332111 111222 233333 45577665322 3689999988876544
Q ss_pred cCCC
Q psy14726 616 TDMN 619 (712)
Q Consensus 616 ~~~p 619 (712)
-..+
T Consensus 269 ~~~~ 272 (353)
T 3vgz_A 269 VAAP 272 (353)
T ss_dssp EECS
T ss_pred EEcC
Confidence 3333
No 96
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.88 E-value=0.38 Score=47.35 Aligned_cols=192 Identities=10% Similarity=0.029 Sum_probs=105.8
Q ss_pred EEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCC
Q psy14726 391 GTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTE 468 (712)
Q Consensus 391 ~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~ 468 (712)
++++. ++.+|+.... ...+.+||+. ++...+........-++++. -+|.+|+.... ...+.+||+.
T Consensus 24 ~i~~d~~g~l~v~~~~-----~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~v~~~d~~- 91 (300)
T 2qc5_A 24 GITSSEDGKVWFTQHK-----ANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG-----ANKIGKLSKK- 91 (300)
T ss_dssp EEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-
T ss_pred eeeECCCCCEEEEcCC-----CCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC-----CCeEEEECCC-
Confidence 44443 6778886532 2468999988 77765432211122334444 35788886431 2468999988
Q ss_pred CceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCC-CcceEEEEE-CCEEEEEc
Q psy14726 469 NQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHR-RSGVSCIAY-HECIYVIG 544 (712)
Q Consensus 469 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-r~~~~~~~~-~~~iyv~G 544 (712)
.++.... ++..........+ ++++|+....+ ..+.+||+. ++..... ++.. ..-.+++.. +++||+..
T Consensus 92 g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 92 GGFTEYP-LPQPDSGPYGITEGLNGDIWFTQLNG-----DRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp SCEEEEE-CSSTTCCEEEEEECSTTCEEEEETTT-----TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEE
T ss_pred CCeEEec-CCCCCCCCccceECCCCCEEEEccCC-----CeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEe
Confidence 6665442 2211122233333 67899875322 468899987 6655443 2211 122233332 57788875
Q ss_pred CCCCCCccceEEEEeCCCCcEEEcCCCCCCcc-ceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 545 GFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRS-NFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 545 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~-~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
.. ...+++||+ +.++..+.. +.... ..+++.- ++.+|+..... ..+.+||+ ++++...
T Consensus 164 ~~-----~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~-----~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 164 NQ-----NNSIGRITN-TGKLEEYPL-PTNAAAPVGITSGNDGALWFVEIMG-----NKIGRITT-TGEISEY 223 (300)
T ss_dssp TT-----TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSSEEEEETTT-----TEEEEECT-TCCEEEE
T ss_pred cC-----CCeEEEECC-CCcEEEeeC-CCCCCCcceEEECCCCCEEEEccCC-----CEEEEEcC-CCcEEEE
Confidence 32 257899998 666665432 22212 2233333 57788764321 25889998 5666554
No 97
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.87 E-value=0.12 Score=51.73 Aligned_cols=186 Identities=6% Similarity=0.102 Sum_probs=99.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++..++.|+.++ .+..+|..+++....-.-.... -.+++. .+++.++.||.+ ..+..||..+.+-...
T Consensus 34 ~~~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~ 102 (312)
T 4ery_A 34 NGEWLASSSADK-----LIKIWGAYDGKFEKTISGHKLG-ISDVAWSSDSNLLVSASDD-----KTLKIWDVSSGKCLKT 102 (312)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEE
T ss_pred CCCEEEEeeCCC-----eEEEEeCCCcccchhhccCCCc-eEEEEEcCCCCEEEEECCC-----CEEEEEECCCCcEEEE
Confidence 345566666443 4778888877765432211111 122222 356777777754 4688899887653221
Q ss_pred ccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCC
Q psy14726 475 APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMS 550 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 550 (712)
+........++.+ ++.+++.|+.++ .+..||..+.+-... ++........+.+ ++.+++.|+.+
T Consensus 103 --~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d--- 170 (312)
T 4ery_A 103 --LKGHSNYVFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYD--- 170 (312)
T ss_dssp --EECCSSCEEEEEECSSSSEEEEEETTS-----CEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT---
T ss_pred --EcCCCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCC---
Confidence 1111111122223 566777787664 588899887653222 2211122222333 56677777754
Q ss_pred ccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 551 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 551 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
..+..||..+.+....-.... ......+.+ ++..++.|+.++ .+.+||..+.+-
T Consensus 171 --~~i~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~ 226 (312)
T 4ery_A 171 --GLCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDN-----TLKLWDYSKGKC 226 (312)
T ss_dssp --SCEEEEETTTCCEEEEECCSS-CCCEEEEEECTTSSEEEEEETTT-----EEEEEETTTTEE
T ss_pred --CcEEEEECCCCceeeEEeccC-CCceEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcE
Confidence 468899988765433211111 111122222 667777777665 688899887754
No 98
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.85 E-value=0.081 Score=53.28 Aligned_cols=187 Identities=10% Similarity=0.034 Sum_probs=103.5
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 473 (712)
++..++.|+.+ ..+..||..+.+......+...... .+++. .+++.++.|+.+ ..+..||..+.+...
T Consensus 108 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 108 DGCTLIVGGEA-----STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVR 177 (337)
T ss_dssp TSSEEEEEESS-----SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCceee
Confidence 56666777643 4689999998875443333222222 22232 256777777654 458899988776433
Q ss_pred cccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEE-ECCEEEEEcCCCCCC
Q psy14726 474 IAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIA-YHECIYVIGGFNGMS 550 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~ 550 (712)
.- ...........+ ++..++.|+.+ ..+..||..+.+-...-..+.+ -.+++. -++..+++|+.+
T Consensus 178 ~~--~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~~--- 245 (337)
T 1gxr_A 178 QF--QGHTDGASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHDFTSQ--IFSLGYCPTGEWLAVGMES--- 245 (337)
T ss_dssp EE--CCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECSSC--EEEEEECTTSSEEEEEETT---
T ss_pred ee--ecccCceEEEEECCCCCEEEEEecC-----CcEEEEECCCCceEeeecCCCc--eEEEEECCCCCEEEEEcCC---
Confidence 21 111122223333 66677777655 3688999887764333222221 222222 256667777643
Q ss_pred ccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 551 RMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 551 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
..+..||..+..-..+..... .-.+++.. +++.++.|+.++ .+.+||..+++-.
T Consensus 246 --~~i~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg-----~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 246 --SNVEVLHVNKPDKYQLHLHES--CVLSLKFAYCGKWFVSTGKDN-----LLNAWRTPYGASI 300 (337)
T ss_dssp --SCEEEEETTSSCEEEECCCSS--CEEEEEECTTSSEEEEEETTS-----EEEEEETTTCCEE
T ss_pred --CcEEEEECCCCCeEEEcCCcc--ceeEEEECCCCCEEEEecCCC-----cEEEEECCCCeEE
Confidence 468899988765444322211 11222222 577778887654 6888998877654
No 99
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.83 E-value=0.18 Score=50.49 Aligned_cols=225 Identities=17% Similarity=0.173 Sum_probs=113.7
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..++.|+.+ ..+..+|..++.-... .... ...-.++... ++..++.|+.+ ..+..||..+++-..
T Consensus 25 ~~~l~s~~~d-----g~v~lWd~~~~~~~~~--~~~~-~~~v~~~~~~~~~~~l~s~s~d-----~~i~vwd~~~~~~~~ 91 (304)
T 2ynn_A 25 EPWVLTTLYS-----GRVELWNYETQVEVRS--IQVT-ETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVV 91 (304)
T ss_dssp SSEEEEEETT-----SEEEEEETTTTEEEEE--EECC-SSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CCEEEEEcCC-----CcEEEEECCCCceeEE--eecc-CCcEEEEEEeCCCCEEEEECCC-----CEEEEEECCCCcEEE
Confidence 4456666643 3678888887764331 1111 1111223333 56667777753 468889988776322
Q ss_pred -eCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE---CCEEEEEcccCC
Q psy14726 427 -IAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL---QGKIYITGGFNG 501 (712)
Q Consensus 427 -~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~ 501 (712)
+.. . ...-.+++. .++.+++.|+.+ ..+..||..++. .....+..-...-.++.+ ++.+++.||.++
T Consensus 92 ~~~~-h-~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~ 163 (304)
T 2ynn_A 92 DFEA-H-PDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (304)
T ss_dssp EEEC-C-SSCEEEEEECSSSSEEEEEETT-----SCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETTS
T ss_pred EEeC-C-CCcEEEEEEcCCCCEEEEECCC-----CeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCCC
Confidence 211 1 111122333 356677777754 457888876542 111111111111122333 456778887664
Q ss_pred CCccCceEEeeCCCCe--eEEeCCCCCCCcceEEEEE----CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCc
Q psy14726 502 HNCLNSCEVYDPECNQ--WTLIEPMRHRRSGVSCIAY----HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPR 575 (712)
Q Consensus 502 ~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 575 (712)
.+..||..+.. ..... ...+ ....+.+ ++.+++.|+.+ ..+..||..+.+-... +....
T Consensus 164 -----~v~iwd~~~~~~~~~~~~--~~~~-~v~~~~~~~~~~~~~l~s~s~D-----~~i~iWd~~~~~~~~~--~~~h~ 228 (304)
T 2ynn_A 164 -----TVKVWSLGQSTPNFTLTT--GQER-GVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCVAT--LEGHM 228 (304)
T ss_dssp -----EEEEEETTCSSCSEEEEC--CCTT-CEEEEEECCSTTCCEEEEEETT-----SEEEEEETTTTEEEEE--EECCS
T ss_pred -----eEEEEECCCCCccceecc--CCcC-cEEEEEEEEcCCCCEEEEEcCC-----CeEEEEeCCCCcccee--eCCCC
Confidence 57778875543 11111 1111 1122222 45566777654 5788899887643221 11111
Q ss_pred cceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 576 SNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 576 ~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
.....+.+ ++.+++.|+.++ .+.+||..+.+-.
T Consensus 229 ~~v~~~~~~p~~~~l~s~s~Dg-----~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 229 SNVSFAVFHPTLPIIISGSEDG-----TLKIWNSSTYKVE 263 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTS-----CEEEEETTTCCEE
T ss_pred CCEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcee
Confidence 12222333 566788888765 5788898876543
No 100
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.83 E-value=0.14 Score=53.58 Aligned_cols=194 Identities=9% Similarity=0.061 Sum_probs=99.2
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEE-----eCCCCC-CcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeecC
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE-----IAPMNF-KRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNYT 467 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~~~~~~-~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~ 467 (712)
++.+++.|+.+ ..+..||..++.... +..+.. ...-.+++.. ++ .+++.|+.+ ..+.+||..
T Consensus 93 ~~~~l~s~s~d-----g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~~ 162 (402)
T 2aq5_A 93 NDNVIASGSED-----CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD-----NVILVWDVG 162 (402)
T ss_dssp CTTEEEEEETT-----SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT-----SCEEEEETT
T ss_pred CCCEEEEEeCC-----CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC-----CEEEEEECC
Confidence 56777888754 358889988764321 111111 1111223332 33 577777754 458899998
Q ss_pred CCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeC--CCCCCCcceEEEEECCEEEEE
Q psy14726 468 ENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAYHECIYVI 543 (712)
Q Consensus 468 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~~~~iyv~ 543 (712)
+.+....-..........++.+ ++..++.|+.+ ..+.+||+.+.+-...- .....+....+..-++.+++.
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (402)
T 2aq5_A 163 TGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTT 237 (402)
T ss_dssp TTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEE
T ss_pred CCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEE
Confidence 8765432210111112222333 67777777755 46889999887643322 111122222333346787777
Q ss_pred cCCCCCCccceEEEEeCCCCcE-EEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 544 GGFNGMSRMCNGEKYNPVTKTW-SQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 544 GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
|... ..-..+..||..+..- .............+++.. +..+++.|+.++ .+.+||..+++
T Consensus 238 g~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg-----~i~i~d~~~~~ 301 (402)
T 2aq5_A 238 GFSR--MSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDS-----SIRYFEITSEA 301 (402)
T ss_dssp EECT--TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCS-----CEEEEEECSST
T ss_pred eccC--CCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCC-----eEEEEEecCCC
Confidence 7211 0135788999876431 001111111122233333 345666665554 57788877765
No 101
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.83 E-value=0.24 Score=54.78 Aligned_cols=120 Identities=13% Similarity=0.162 Sum_probs=73.2
Q ss_pred EEEECCEEEEEeecCCCCccceEEEEEC-CCCc--EEEeCCCCCC--------cceeEEEEECCeEEEEcccCCCCCCce
Q psy14726 392 TAVIGYNIYVIGGFDGNEYYNSCRCFNA-VTKV--WKEIAPMNFK--------RCYVSTAVHHDVIYAMGGYNGQRRQNS 460 (712)
Q Consensus 392 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~-~~~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~ 460 (712)
-++.++.||+.+.. ...++++|. .+++ |+.-...+.. ....+.++.+++||+..+ ...
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~ 126 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------NGH 126 (571)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSE
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------CCE
Confidence 35569999998652 246999999 7775 8764333211 112345677999998743 246
Q ss_pred eEEeecCCC--ceEEcccC-Ccc-ccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCe--eEEeC
Q psy14726 461 VEKYNYTEN--QWSLIAPM-NVE-RSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIE 522 (712)
Q Consensus 461 v~~yd~~~~--~W~~~~~~-p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~ 522 (712)
++.+|..+. .|+.-..- +.. ....+.++.++++|+..+.........+..||..+++ |+.-.
T Consensus 127 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp EEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 999999877 48753221 111 1122334568999876542111123579999998775 87654
No 102
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.83 E-value=0.16 Score=53.08 Aligned_cols=222 Identities=8% Similarity=0.059 Sum_probs=116.0
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..+..+|..+++........ ....-.+++.. ++..+++|+.+ ..+..||..+++....-. ..........
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~--~~~~v~~v~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~--~~~~~v~~~~ 183 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETD--ESTYVASVKWSHDGSFLSVGLGN-----GLVDIYDVESQTKLRTMA--GHQARVGCLS 183 (401)
T ss_dssp TEEEEEETTTCCEEEEEECC--TTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEEC--CCSSCEEEEE
T ss_pred CeEEEeeCCCCcEeEeeecC--CCCCEEEEEECCCCCEEEEECCC-----CeEEEEECcCCeEEEEec--CCCCceEEEE
Confidence 36889999888776532221 12222233333 66677777754 358899988876543222 1222233344
Q ss_pred ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeE
Q psy14726 442 HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT 519 (712)
Q Consensus 442 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 519 (712)
.++.+++.|+.+ ..+..||..+..-. +..+...........+ ++..++.||.++ .+..||..+.+-.
T Consensus 184 ~~~~~l~~~~~d-----g~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~ 252 (401)
T 4aez_A 184 WNRHVLSSGSRS-----GAIHHHDVRIANHQ-IGTLQGHSSEVCGLAWRSDGLQLASGGNDN-----VVQIWDARSSIPK 252 (401)
T ss_dssp EETTEEEEEETT-----SEEEEEETTSSSCE-EEEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTCSSEE
T ss_pred ECCCEEEEEcCC-----CCEEEEecccCcce-eeEEcCCCCCeeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCCcc
Confidence 467777777754 46888888743311 1111111112222333 677788887653 5888998875432
Q ss_pred Ee-CCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCE-EEEEcc-c
Q psy14726 520 LI-EPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDM-IFAIGG-F 593 (712)
Q Consensus 520 ~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i~v~GG-~ 593 (712)
.. ..... .-.+++.. ++.+++.||.. .-..+..||..+.+-...-... ..-.+++.. ++. +++.+| .
T Consensus 253 ~~~~~~~~--~v~~~~~~p~~~~ll~~~~gs---~d~~i~i~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~g~~ 325 (401)
T 4aez_A 253 FTKTNHNA--AVKAVAWCPWQSNLLATGGGT---MDKQIHFWNAATGARVNTVDAG--SQVTSLIWSPHSKEIMSTHGFP 325 (401)
T ss_dssp EEECCCSS--CCCEEEECTTSTTEEEEECCT---TTCEEEEEETTTCCEEEEEECS--SCEEEEEECSSSSEEEEEECTT
T ss_pred EEecCCcc--eEEEEEECCCCCCEEEEecCC---CCCEEEEEECCCCCEEEEEeCC--CcEEEEEECCCCCeEEEEeecC
Confidence 21 11111 11223333 34677776411 1256889998876543332211 111222222 444 444434 4
Q ss_pred CCCceeeeEEEEECCCCeEEEcc
Q psy14726 594 NGVTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 594 ~~~~~~~~v~~yd~~~~~W~~~~ 616 (712)
++ .+.+||..+.......
T Consensus 326 dg-----~i~v~~~~~~~~~~~~ 343 (401)
T 4aez_A 326 DN-----NLSIWSYSSSGLTKQV 343 (401)
T ss_dssp TC-----EEEEEEEETTEEEEEE
T ss_pred CC-----cEEEEecCCccceeEE
Confidence 33 5788888887766553
No 103
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.82 E-value=0.35 Score=47.24 Aligned_cols=230 Identities=8% Similarity=-0.061 Sum_probs=123.5
Q ss_pred CceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCC-CcEEEeCCCCC-CcceeE
Q psy14726 362 TDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVT-KVWKEIAPMNF-KRCYVS 438 (712)
Q Consensus 362 ~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~~~-~r~~~~ 438 (712)
...+..+|..+++...+... ...-.+++.. ++..+++++ ...++.+|..+ ++...+..... ......
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~----~~~v~~~~~spdg~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 90 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQT----PELFEAPNWSPDGKYLLLNS------EGLLYRLSLAGDPSPEKVDTGFATICNNDH 90 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEE----SSCCEEEEECTTSSEEEEEE------TTEEEEEESSSCCSCEECCCTTCCCBCSCC
T ss_pred ceeEEEEeCCCCceeeeccC----CcceEeeEECCCCCEEEEEc------CCeEEEEeCCCCCCceEeccccccccccce
Confidence 45688899888877654221 1122233333 566666665 24799999999 87776654332 122222
Q ss_pred EEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CC-EEEEEcccCCCCccCceEEeeCCCC
Q psy14726 439 TAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QG-KIYITGGFNGHNCLNSCEVYDPECN 516 (712)
Q Consensus 439 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~ 516 (712)
...-+++.+++++.... ....++.+|..+.....+..... ....+.. ++ .|++.++.++ ...++.+|..+.
T Consensus 91 ~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~---~~~l~~~~~~~~ 163 (297)
T 2ojh_A 91 GISPDGALYAISDKVEF-GKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQ---VFDIYSMDIDSG 163 (297)
T ss_dssp EECTTSSEEEEEECTTT-SSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETT---EEEEEEEETTTC
T ss_pred EECCCCCEEEEEEeCCC-CcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCC---ceEEEEEECCCC
Confidence 23346666666653221 34678999988877555543321 1122222 44 4554554443 136777778877
Q ss_pred eeEEeCCCCCCCcceEEEEECCE-EEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEccc
Q psy14726 517 QWTLIEPMRHRRSGVSCIAYHEC-IYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGF 593 (712)
Q Consensus 517 ~W~~~~~~p~~r~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 593 (712)
....+...+... ......-+++ |++.+..++ ...++.++........+.... .......+ +++.+++++.
T Consensus 164 ~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 164 VETRLTHGEGRN-DGPDYSPDGRWIYFNSSRTG---QMQIWRVRVDGSSVERITDSA---YGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp CEEECCCSSSCE-EEEEECTTSSEEEEEECTTS---SCEEEEEETTSSCEEECCCCS---EEEEEEEECTTSSEEEEEEE
T ss_pred cceEcccCCCcc-ccceECCCCCEEEEEecCCC---CccEEEECCCCCCcEEEecCC---cccCCeEECCCCCEEEEEEc
Confidence 776665432211 1111222454 555443332 457888888777777765432 11222222 5555555544
Q ss_pred CCCc------eeeeEEEEECCCCeEEEc
Q psy14726 594 NGVT------TIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 594 ~~~~------~~~~v~~yd~~~~~W~~~ 615 (712)
++.. ....+++||+.+++...+
T Consensus 237 ~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 237 DADVFDHPRDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp ETTCCSCCSSEEEEEEEEETTSCSCEEE
T ss_pred CCCCCcccccCceEEEEEecCCCCceee
Confidence 3221 235699999988776554
No 104
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.81 E-value=0.062 Score=55.23 Aligned_cols=182 Identities=10% Similarity=0.082 Sum_probs=93.6
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEE-ECC-eEEEEcccCCCCCCceeEEeecCCCceE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAV-HHD-VIYAMGGYNGQRRQNSVEKYNYTENQWS 472 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 472 (712)
++..++.|+.++ .+..+|..+++-... +...... .+++. .++ .+++.|+.+ ..+..||..+.+-.
T Consensus 138 dg~~l~sgs~d~-----~i~iwd~~~~~~~~~--~~~h~~~V~~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~ 205 (344)
T 4gqb_B 138 SGTQAVSGSKDI-----CIKVWDLAQQVVLSS--YRAHAAQVTCVAASPHKDSVFLSCSED-----NRILLWDTRCPKPA 205 (344)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTTEEEEE--ECCCSSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTSSSCE
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEE--EcCcCCceEEEEecCCCCCceeeeccc-----ccccccccccccee
Confidence 677777887543 588999988764322 2111111 12222 233 577777754 45888998876643
Q ss_pred EcccCCccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CC-EEEEEcCC
Q psy14726 473 LIAPMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HE-CIYVIGGF 546 (712)
Q Consensus 473 ~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~ 546 (712)
..-..........++.+ ++++++.|+.++ .+..||..+.+- +..+.........+.+ ++ ++++.|+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg-----~v~~wd~~~~~~--~~~~~~h~~~v~~v~fsp~g~~~lasgs~ 278 (344)
T 4gqb_B 206 SQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG-----TVSLVDTKSTSC--VLSSAVHSQCVTGLVFSPHSVPFLASLSE 278 (344)
T ss_dssp EECC----CCCEEEEEECSSCTTEEEEEETTS-----EEEEEESCC--C--CEEEECCSSCEEEEEECSSSSCCEEEEET
T ss_pred eeeecceeeccceeeeecCCCCcceEEeccCC-----cEEEEECCCCcE--EEEEcCCCCCEEEEEEccCCCeEEEEEeC
Confidence 22111111111222232 567888887653 578888876542 1111111122222333 33 56666765
Q ss_pred CCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE---CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 547 NGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI---DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 547 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
+ ..|..||..+.+-..+... ...-..+.+ +..+++.||.++ .|.+|+..+
T Consensus 279 D-----~~i~vwd~~~~~~~~~~~H---~~~V~~v~~sp~~~~llas~s~D~-----~v~~w~v~~ 331 (344)
T 4gqb_B 279 D-----CSLAVLDSSLSELFRSQAH---RDFVRDATWSPLNHSLLTTVGWDH-----QVVHHVVPT 331 (344)
T ss_dssp T-----SCEEEECTTCCEEEEECCC---SSCEEEEEECSSSTTEEEEEETTS-----CEEEEECCC
T ss_pred C-----CeEEEEECCCCcEEEEcCC---CCCEEEEEEeCCCCeEEEEEcCCC-----eEEEEECCC
Confidence 4 4678899887754433211 111222333 446788888776 455555544
No 105
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.80 E-value=0.044 Score=56.63 Aligned_cols=184 Identities=11% Similarity=0.056 Sum_probs=96.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeecCCCceEE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 473 (712)
++..++.|+.++ .+..||..+++-...-..... .-.+++.. ++ .+++.||.+ ..+..||..+.+-..
T Consensus 150 dg~~l~sgs~dg-----~v~iwd~~~~~~~~~~~~h~~-~v~~v~~s~~~~~~~~s~~~d-----g~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 150 DGTQAVSGGKDF-----SVKVWDLSQKAVLKSYNAHSS-EVNCVAACPGKDTIFLSCGED-----GRILLWDTRKPKPAT 218 (357)
T ss_dssp SSSEEEEEETTS-----CEEEEETTTTEEEEEECCCSS-CEEEEEECTTCSSCEEEEETT-----SCEEECCTTSSSCBC
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEEEcCCCC-CEEEEEEccCCCceeeeeccC-----CceEEEECCCCceee
Confidence 667777887543 588899988765432221111 11223332 33 567777754 358888887765332
Q ss_pred cccCCccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CC-EEEEEcCCC
Q psy14726 474 IAPMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HE-CIYVIGGFN 547 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~ 547 (712)
............++.+ ++.+++.|+.++ .+..||..+.+-... +.........+.+ ++ ++++.|+.+
T Consensus 219 ~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~-----~i~~wd~~~~~~~~~--~~~~~~~v~~l~~sp~~~~~lasgs~D 291 (357)
T 4g56_B 219 RIDFCASDTIPTSVTWHPEKDDTFACGDETG-----NVSLVNIKNPDSAQT--SAVHSQNITGLAYSYHSSPFLASISED 291 (357)
T ss_dssp BCCCTTCCSCEEEEEECTTSTTEEEEEESSS-----CEEEEESSCGGGCEE--ECCCSSCEEEEEECSSSSCCEEEEETT
T ss_pred eeeeccccccccchhhhhcccceEEEeeccc-----ceeEEECCCCcEeEE--EeccceeEEEEEEcCCCCCEEEEEeCC
Confidence 2222222222233333 456788887653 578888876542111 1111112222332 33 566667654
Q ss_pred CCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE--ECCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 548 GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV--IDDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
..|.+||..+.+-...-.. ...-.+++. .++.+++.||.++ .|.+||..+
T Consensus 292 -----~~i~iwd~~~~~~~~~~~H--~~~V~~vafsP~d~~~l~s~s~Dg-----~v~iW~~~~ 343 (357)
T 4g56_B 292 -----CTVAVLDADFSEVFRDLSH--RDFVTGVAWSPLDHSKFTTVGWDH-----KVLHHHLPS 343 (357)
T ss_dssp -----SCEEEECTTSCEEEEECCC--SSCEEEEEECSSSTTEEEEEETTS-----CEEEEECC-
T ss_pred -----CEEEEEECCCCcEeEECCC--CCCEEEEEEeCCCCCEEEEEcCCC-----eEEEEECCC
Confidence 4688899887754433211 111122333 2677888888776 466777543
No 106
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.77 E-value=0.12 Score=59.87 Aligned_cols=228 Identities=15% Similarity=0.114 Sum_probs=118.1
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..+++|+. ...+..||..++.....-. .. ...-.+++.. ++..+++||.+ ..+..||..+++...
T Consensus 25 ~~~la~~~~-----~g~v~iwd~~~~~~~~~~~--~~-~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~ 91 (814)
T 3mkq_A 25 EPWVLTTLY-----SGRVEIWNYETQVEVRSIQ--VT-ETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVV 91 (814)
T ss_dssp SSEEEEEET-----TSEEEEEETTTTEEEEEEE--CC-SSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CCEEEEEeC-----CCEEEEEECCCCceEEEEe--cC-CCcEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEE
Confidence 445666653 2468889988876554211 11 1112233333 56677777753 468999998887643
Q ss_pred eCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE---CCEEEEEcccCCC
Q psy14726 427 IAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL---QGKIYITGGFNGH 502 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~ 502 (712)
.-...... -.+++. -++..++.|+.+ ..+.+||..++ |.....+........++.+ ++..++.|+.++
T Consensus 92 ~~~~~~~~-v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg- 163 (814)
T 3mkq_A 92 DFEAHPDY-IRSIAVHPTKPYVLSGSDD-----LTVKLWNWENN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR- 163 (814)
T ss_dssp EEECCSSC-EEEEEECSSSSEEEEEETT-----SEEEEEEGGGT-SEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS-
T ss_pred EEecCCCC-EEEEEEeCCCCEEEEEcCC-----CEEEEEECCCC-ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCC-
Confidence 32211111 122222 356666666643 46888888765 2222111111111222222 466777777653
Q ss_pred CccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE---CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceE
Q psy14726 503 NCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY---HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFA 579 (712)
Q Consensus 503 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~ 579 (712)
.+..||..+..-...-..........+... ++..++.|+.+ ..+..||..+.+-... +........
T Consensus 164 ----~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~--~~~~~~~v~ 232 (814)
T 3mkq_A 164 ----TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCVAT--LEGHMSNVS 232 (814)
T ss_dssp ----EEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT-----SEEEEEETTTTEEEEE--EECCSSCEE
T ss_pred ----eEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC-----CEEEEEECCCCcEEEE--EcCCCCCEE
Confidence 588888765542221111111122222222 56677777754 4788999877653222 111111122
Q ss_pred EEEE--CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 580 IEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 580 ~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
.+.+ ++.+++.||.++ .+.+||+.+.+-
T Consensus 233 ~~~~~~~~~~l~~~~~dg-----~v~vwd~~~~~~ 262 (814)
T 3mkq_A 233 FAVFHPTLPIIISGSEDG-----TLKIWNSSTYKV 262 (814)
T ss_dssp EEEECSSSSEEEEEETTS-----CEEEEETTTCSE
T ss_pred EEEEcCCCCEEEEEeCCC-----eEEEEECCCCcE
Confidence 2222 566788888665 578888877543
No 107
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.75 E-value=0.072 Score=54.68 Aligned_cols=192 Identities=9% Similarity=0.065 Sum_probs=101.7
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 473 (712)
++.++++|+.+ ..+..||..+++|..+..+...... .+++. -+++.++.|+.+ ..+..||..+.++..
T Consensus 19 ~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 19 DRTQIAICPNN-----HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGRTWKP 88 (372)
T ss_dssp TSSEEEEECSS-----SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETTEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-----CeEEEEECCCCeeee
Confidence 55666677643 4689999999887665544322222 23333 356777777743 468899998888765
Q ss_pred cccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCe-eEEeCCC--CCCCcceEEEEE-CCEEEEEcCCC
Q psy14726 474 IAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ-WTLIEPM--RHRRSGVSCIAY-HECIYVIGGFN 547 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~--p~~r~~~~~~~~-~~~iyv~GG~~ 547 (712)
...+.........+.+ +++.++.|+.++ .+..||..+.. |...... +....-.++... ++..++.|+.+
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGSR-----VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTS-----SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCC-----EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 5433222222333333 567777777553 45666655543 3333222 111122222222 56677777654
Q ss_pred CCCccceEEEEeCCCCc---------E-------EEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 548 GMSRMCNGEKYNPVTKT---------W-------SQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~~---------W-------~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
..+..||..... | ..+..+.........+.+ ++..++.|+.++ .+.+||..+
T Consensus 164 -----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~ 233 (372)
T 1k8k_C 164 -----FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDS-----TVCLADADK 233 (372)
T ss_dssp -----SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTT-----EEEEEEGGG
T ss_pred -----CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCC-----EEEEEECCC
Confidence 467788854211 1 111111111111222333 666777777654 578888876
Q ss_pred CeE
Q psy14726 610 DEW 612 (712)
Q Consensus 610 ~~W 612 (712)
.+-
T Consensus 234 ~~~ 236 (372)
T 1k8k_C 234 KMA 236 (372)
T ss_dssp TTE
T ss_pred Cce
Confidence 543
No 108
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.72 E-value=0.49 Score=50.28 Aligned_cols=184 Identities=14% Similarity=0.144 Sum_probs=101.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++..++.|+.+ ..+..||..+.+-...-...... -.+++. .++..++.|+.+ ..+..||..+.+-.
T Consensus 279 ~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~~-- 345 (464)
T 3v7d_B 279 HGNIVVSGSYD-----NTLIVWDVAQMKCLYILSGHTDR-IYSTIYDHERKRCISASMD-----TTIRIWDLENGELM-- 345 (464)
T ss_dssp ETTEEEEEETT-----SCEEEEETTTTEEEEEECCCSSC-EEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEE--
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEecCCCCC-EEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcEE--
Confidence 45566677654 35889999877643322211122 222332 356677777754 45889998876532
Q ss_pred ccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccce
Q psy14726 475 APMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCN 554 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 554 (712)
..+........+..+++..++.|+.++ .+..||..+..-..... ........+...++.+++.|+ + ..
T Consensus 346 ~~~~~h~~~v~~~~~~~~~l~s~s~dg-----~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-d-----g~ 413 (464)
T 3v7d_B 346 YTLQGHTALVGLLRLSDKFLVSAAADG-----SIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-E-----NQ 413 (464)
T ss_dssp EEECCCSSCEEEEEECSSEEEEEETTS-----EEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-T-----TE
T ss_pred EEEeCCCCcEEEEEEcCCEEEEEeCCC-----cEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-C-----Ce
Confidence 222222223344555677777777664 58889988765322221 112233344555777777776 2 47
Q ss_pred EEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEEC
Q psy14726 555 GEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDE 607 (712)
Q Consensus 555 v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 607 (712)
+..||..+++-......+....-.+++..++.+++.|+.++.. -++++|.
T Consensus 414 i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~~---~i~~ldf 463 (464)
T 3v7d_B 414 FNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQS---FLEILDF 463 (464)
T ss_dssp EEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEETTEE---EEEEEEC
T ss_pred EEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEeCCeE---EEEEeec
Confidence 8999999887654322222222233344466666666655422 3566653
No 109
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.69 E-value=0.19 Score=50.09 Aligned_cols=196 Identities=13% Similarity=0.246 Sum_probs=96.3
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE--C--CeEEEEcccCCCCCCceeEEeecCCCc-e
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--H--DVIYAMGGYNGQRRQNSVEKYNYTENQ-W 471 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~-W 471 (712)
+.+++.|+.+ ..+..+|..+++|..+..+.........+.+ + +.+++.|+.+ ..+..||..+.. +
T Consensus 67 g~~l~s~s~D-----~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-----~~v~~wd~~~~~~~ 136 (297)
T 2pm7_B 67 GTILASCSYD-----GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD-----GKVSVVEFKENGTT 136 (297)
T ss_dssp CSEEEEEETT-----TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEBCSSSCB
T ss_pred CCEEEEEcCC-----CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-----CcEEEEEecCCCce
Confidence 5677777754 4688899988877554333221222222222 2 5677777654 457777776542 2
Q ss_pred EEcccCCccccceeEEEE---------------CCEEEEEcccCCCCccCceEEeeCCC--CeeEEeCCCCCCCcceEEE
Q psy14726 472 SLIAPMNVERSDASATTL---------------QGKIYITGGFNGHNCLNSCEVYDPEC--NQWTLIEPMRHRRSGVSCI 534 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~---------------~~~iyv~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~p~~r~~~~~~ 534 (712)
.... +.........+.+ ++++++.||.++ .+..||..+ ..|.....+.........+
T Consensus 137 ~~~~-~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~-----~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v 210 (297)
T 2pm7_B 137 SPII-IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSDWVRDV 210 (297)
T ss_dssp CCEE-EECCSSCEEEEEECCCC------------CCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred eeee-eecccCccceEeecCCcccccccCCCCCCcceEEEEcCCC-----cEEEEEEcCCCceEEEEEEecCCCCceEEE
Confidence 1110 0000000111111 245777887664 456666544 3465554443222222233
Q ss_pred EE--C---CEEEEEcCCCCCCccceEEEEeCCC--CcEEE--cCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEE
Q psy14726 535 AY--H---ECIYVIGGFNGMSRMCNGEKYNPVT--KTWSQ--VPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVEC 604 (712)
Q Consensus 535 ~~--~---~~iyv~GG~~~~~~~~~v~~yd~~~--~~W~~--~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~ 604 (712)
.. + +.+++.|+.+ ..+..||..+ ..|.. +........-.+++.. ++.+++.||.++ .+.+
T Consensus 211 ~~sp~~~~~~~las~s~D-----~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~-----~v~l 280 (297)
T 2pm7_B 211 AWSPTVLLRSYMASVSQD-----RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN-----KVTL 280 (297)
T ss_dssp EECCCCSSSEEEEEEETT-----SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTS-----CEEE
T ss_pred EECCCCCCceEEEEEECC-----CcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCC-----cEEE
Confidence 33 2 3677777765 4566777655 34543 2111111111222222 677888888765 3556
Q ss_pred EECC-CCeEEEccCC
Q psy14726 605 YDEK-TDEWYEATDM 618 (712)
Q Consensus 605 yd~~-~~~W~~~~~~ 618 (712)
|+.. .+.|..+..+
T Consensus 281 w~~~~~g~w~~~~~~ 295 (297)
T 2pm7_B 281 WKENLEGKWEPAGEV 295 (297)
T ss_dssp EEECTTSCEEEC---
T ss_pred EEECCCCcEEecccc
Confidence 6654 4689877654
No 110
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.67 E-value=0.16 Score=50.69 Aligned_cols=211 Identities=10% Similarity=0.054 Sum_probs=112.3
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++.+|++.-. ...+++||+.+++...... +. + -.+++. -+|++|+..+ ..+.+||+.+.+++.+
T Consensus 24 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~-~~-~-~~~i~~~~dG~l~v~~~-------~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 24 SNSLLFVDIP-----AKKVCRWDSFTKQVQRVTM-DA-P-VSSVALRQSGGYVATIG-------TKFCALNWKEQSAVVL 88 (297)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTCCEEEEEC-SS-C-EEEEEEBTTSSEEEEET-------TEEEEEETTTTEEEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEeC-CC-c-eEEEEECCCCCEEEEEC-------CeEEEEECCCCcEEEE
Confidence 4678877642 3568999999887654422 21 1 223333 3667776531 5799999999998877
Q ss_pred ccCCcc--ccceeEEEE--CCEEEEEcccCC------CCccCceEEeeCCCCeeEEeC-CCCCCCcceEEEEE-C-CEEE
Q psy14726 475 APMNVE--RSDASATTL--QGKIYITGGFNG------HNCLNSCEVYDPECNQWTLIE-PMRHRRSGVSCIAY-H-ECIY 541 (712)
Q Consensus 475 ~~~p~~--r~~~~~~~~--~~~iyv~GG~~~------~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~-~~iy 541 (712)
...+.. ........+ +|++|+..-... ......++++|+.. +...+. .+.. ..+.+.. + ..+|
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~---pngi~~spdg~~ly 164 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDI---SNGLDWSLDHKIFY 164 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESB---EEEEEECTTSCEEE
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecccc---ccceEEcCCCCEEE
Confidence 544321 111222333 678887431111 01235789998863 333322 1111 1233333 3 4688
Q ss_pred EEcCCCCCCccceEEEEeC--CCCcEEE---cCCCCCC-ccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEE
Q psy14726 542 VIGGFNGMSRMCNGEKYNP--VTKTWSQ---VPDMYNP-RSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 542 v~GG~~~~~~~~~v~~yd~--~~~~W~~---~~~~p~~-r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 614 (712)
+.... ...+++||. .+..... +..++.. ..-.+++.- ++.||+..... ..|.+||+++++...
T Consensus 165 v~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~-----~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 165 YIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG-----GRVIRLDPVTGKRLQ 234 (297)
T ss_dssp EEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-----TEEEEECTTTCCEEE
T ss_pred EecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-----CEEEEEcCCCceEEE
Confidence 87642 357888875 4554421 1112211 111233332 67888764322 258999999877654
Q ss_pred ccCCCCcccceEEEEEcC----cceeE
Q psy14726 615 ATDMNIYRSALSACVIMG----LPNVY 637 (712)
Q Consensus 615 ~~~~p~~r~~~~~~~~~~----~~~v~ 637 (712)
.-.+|.. ...++.+.+ .+||.
T Consensus 235 ~i~~p~~--~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 235 TVKLPVD--KTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp EEECSSS--BEEEEEEESGGGCEEEEE
T ss_pred EEECCCC--CceEEEEeCCCCCEEEEE
Confidence 4344432 344555543 56765
No 111
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.67 E-value=0.036 Score=57.32 Aligned_cols=239 Identities=11% Similarity=0.104 Sum_probs=112.4
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcc-eEEEEE-CCEEEEEeecCCCCccceEEEEECCCCc-E
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAY-HGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKV-W 424 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~-W 424 (712)
+.+++.|+.+ ..+..||..++.|..+. .+...... .+++.. ++..++.|+.+ ..+..||..++. |
T Consensus 23 g~~l~~~~~d-----~~i~iw~~~~~~~~~~~--~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 23 RTEFVTTTAT-----NQVELYEQDGNGWKHAR--TFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTW 90 (377)
T ss_dssp SSEEECCCSS-----SCBCEEEEETTEEEECC--CBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC------CC
T ss_pred CCEEEEecCC-----CEEEEEEccCCceEEEE--EEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCce
Confidence 4456666532 34667888888776632 22222222 233333 56777777754 358888888876 5
Q ss_pred EEeCCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCc-eEEcccCCc-cccceeEEEE--CCEEEEEcc
Q psy14726 425 KEIAPMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQ-WSLIAPMNV-ERSDASATTL--QGKIYITGG 498 (712)
Q Consensus 425 ~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG 498 (712)
.....+.........+.+ +++.++.|+.+ ..+..||..+.+ |.....+.. .......+.+ ++++++.|+
T Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 91 KQTLVLLRLNRAATFVRWSPNEDKFAVGSGA-----RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp CCEEECCCCSSCEEEEECCTTSSCCEEEESS-----SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred eeeeEecccCCceEEEEECCCCCEEEEEecC-----CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 443333222222222222 56777777654 357888887764 443333332 1122222333 667778887
Q ss_pred cCCCCccCceEEeeCCCCe----------------eEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeC
Q psy14726 499 FNGHNCLNSCEVYDPECNQ----------------WTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNP 560 (712)
Q Consensus 499 ~~~~~~~~~v~~yd~~~~~----------------W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~ 560 (712)
.++ .+..||..+.. -+.+..+. .......+.+ ++++++.|+.+ ..+..||.
T Consensus 166 ~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d-----~~i~iwd~ 234 (377)
T 3dwl_C 166 ADR-----KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYP-SGGWVHAVGFSPSGNALAYAGHD-----SSVTIAYP 234 (377)
T ss_dssp SSS-----CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCC-CSSSEEEEEECTTSSCEEEEETT-----TEEC-CEE
T ss_pred CCC-----EEEEEEEEecccCCCccccccccccchhhhhhccc-CCceEEEEEECCCCCEEEEEeCC-----CcEEEEEC
Confidence 653 47777765332 22222221 1111222233 56667777654 45677777
Q ss_pred CCCcE--EEcCCCCCCccc-eEEE-EECCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCC
Q psy14726 561 VTKTW--SQVPDMYNPRSN-FAIE-VIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNI 620 (712)
Q Consensus 561 ~~~~W--~~~~~~p~~r~~-~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~ 620 (712)
.+.+- ..+..+...... .+++ .-++++++.|+.+ .+.+|+.....|.....+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~ 292 (377)
T 3dwl_C 235 SAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNY------SPILLQGNESGWAHTRDLDA 292 (377)
T ss_dssp CSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSS------SEEEECCCC---CCSBCCCS
T ss_pred CCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCC------cEEEEEeCCCceEEEeeecc
Confidence 66532 223222222211 2222 2378877776532 34577777777877655543
No 112
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.66 E-value=0.45 Score=49.63 Aligned_cols=188 Identities=10% Similarity=0.094 Sum_probs=99.1
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++..++.|+.+ ..+..||..+++-...-.... ..-.+++. -++++++.|+.+ ..+.+||..+.+-.
T Consensus 108 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~-- 174 (420)
T 3vl1_A 108 QMRRFILGTTE-----GDIKVLDSNFNLQREIDQAHV-SEITKLKFFPSGEALISSSQD-----MQLKIWSVKDGSNP-- 174 (420)
T ss_dssp SSCEEEEEETT-----SCEEEECTTSCEEEEETTSSS-SCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCCC--
T ss_pred CCCEEEEEECC-----CCEEEEeCCCcceeeeccccc-CccEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCcCc--
Confidence 67778888754 358899988776544322111 11223333 256777777754 46889998765421
Q ss_pred ccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCC-CCCCcce-EEEE---------------
Q psy14726 475 APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-RHRRSGV-SCIA--------------- 535 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~-~~~~--------------- 535 (712)
..+........++.+ ++..++.|+.++ .+..||..+.+-...-.. ....... +++.
T Consensus 175 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 249 (420)
T 3vl1_A 175 RTLIGHRATVTDIAIIDRGRNVLSASLDG-----TIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSK 249 (420)
T ss_dssp EEEECCSSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCC
T ss_pred eEEcCCCCcEEEEEEcCCCCEEEEEcCCC-----cEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCc
Confidence 111111111122222 566777777654 588888887753322111 1111111 1111
Q ss_pred -------ECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEE
Q psy14726 536 -------YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYD 606 (712)
Q Consensus 536 -------~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd 606 (712)
-++..++.|+.+ ..+..||..+.+-...-.......-.+++.. ++. +++.|+.++ .+.+||
T Consensus 250 v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg-----~i~vwd 319 (420)
T 3vl1_A 250 KNNLEFGTYGKYVIAGHVS-----GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENG-----MLAQWD 319 (420)
T ss_dssp CCTTCSSCTTEEEEEEETT-----SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTS-----EEEEEE
T ss_pred ccceEEcCCCCEEEEEcCC-----CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCC-----eEEEEE
Confidence 256777777654 4588999887653222111111112222222 444 778888665 688999
Q ss_pred CCCCe
Q psy14726 607 EKTDE 611 (712)
Q Consensus 607 ~~~~~ 611 (712)
..+..
T Consensus 320 ~~~~~ 324 (420)
T 3vl1_A 320 LRSPE 324 (420)
T ss_dssp TTCTT
T ss_pred cCCCc
Confidence 88753
No 113
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.65 E-value=0.1 Score=54.96 Aligned_cols=222 Identities=8% Similarity=0.048 Sum_probs=111.1
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
.+++.|+.+ ..|..+|..+++.... .... ...-.++++. ++.+++.||.++ .+..||..+.+-..
T Consensus 121 ~~l~s~s~D-----g~i~vwd~~~~~~~~~--l~~h-~~~V~~v~~~~~~~~l~sgs~D~-----~i~iwd~~~~~~~~- 186 (410)
T 1vyh_C 121 SVMVSASED-----ATIKVWDYETGDFERT--LKGH-TDSVQDISFDHSGKLLASCSADM-----TIKLWDFQGFECIR- 186 (410)
T ss_dssp SEEEEEESS-----SCEEEEETTTCCCCEE--ECCC-SSCEEEEEECTTSSEEEEEETTS-----CCCEEETTSSCEEE-
T ss_pred CEEEEEeCC-----CeEEEEECCCCcEEEE--Eecc-CCcEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCceeE-
Confidence 455666532 3577888777654321 1111 1111223333 567778888643 46778877654322
Q ss_pred CCCCCCcceeE-EEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCC
Q psy14726 428 APMNFKRCYVS-TAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHN 503 (712)
Q Consensus 428 ~~~~~~r~~~~-~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 503 (712)
.+........ ++. .++..++.||.+ ..+..||..+...... +........++.. ++.+++.||.++
T Consensus 187 -~~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D~-- 256 (410)
T 1vyh_C 187 -TMHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSNDQ-- 256 (410)
T ss_dssp -CCCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETTS--
T ss_pred -EEcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCCC--
Confidence 2222112222 222 256677777754 4688999887754221 1111111222222 567788887664
Q ss_pred ccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE----------------------CCEEEEEcCCCCCCccceEEEEeCC
Q psy14726 504 CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY----------------------HECIYVIGGFNGMSRMCNGEKYNPV 561 (712)
Q Consensus 504 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----------------------~~~iyv~GG~~~~~~~~~v~~yd~~ 561 (712)
.+..||..+......- ........++.+ .+.+++.|+.+ ..+..||..
T Consensus 257 ---~v~vwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D-----~~i~iwd~~ 326 (410)
T 1vyh_C 257 ---TVRVWVVATKECKAEL--REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRD-----KTIKMWDVS 326 (410)
T ss_dssp ---CEEEEETTTCCEEEEE--CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETT-----SEEEEEETT
T ss_pred ---eEEEEECCCCceeeEe--cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCC-----CeEEEEECC
Confidence 5777887766543221 101111111111 24566677654 468899987
Q ss_pred CCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 562 TKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 562 ~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
+.+-... +.........+.+ +++.++.||.++ .+.+||..+.+
T Consensus 327 ~~~~~~~--~~~h~~~v~~v~~~~~g~~l~s~s~D~-----~i~vwd~~~~~ 371 (410)
T 1vyh_C 327 TGMCLMT--LVGHDNWVRGVLFHSGGKFILSCADDK-----TLRVWDYKNKR 371 (410)
T ss_dssp TTEEEEE--EECCSSCEEEEEECSSSSCEEEEETTT-----EEEEECCTTSC
T ss_pred CCceEEE--EECCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCc
Confidence 7642211 1111111122222 567777887665 67888876643
No 114
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.64 E-value=0.055 Score=54.74 Aligned_cols=242 Identities=17% Similarity=0.212 Sum_probs=118.7
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE---CCEEEEEeecCCCCccceEEEEECCCCcE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI---GYNIYVIGGFDGNEYYNSCRCFNAVTKVW 424 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 424 (712)
+..++.|+.+ ..+..+|..++....+..... ....-.+++.. ++.+++.|+.+ ..+..+|..+++|
T Consensus 25 g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~g-H~~~V~~v~~~~~~~~~~l~s~s~D-----~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 25 GTRLATCSSD-----RSVKIFDVRNGGQILIADLRG-HEGPVWQVAWAHPMYGNILASCSYD-----RKVIIWREENGTW 93 (316)
T ss_dssp GCEEEEEETT-----TEEEEEEEETTEEEEEEEEEC-CSSCEEEEEECCGGGSSCEEEEETT-----SCEEEECCSSSCC
T ss_pred CCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcC-CCccEEEEEeCCCCCCCEEEEEECC-----CEEEEEECCCCcc
Confidence 3456666642 357778877664322111000 01111223332 25677777754 3588899988877
Q ss_pred EEeCCCCCCcce-eEEEEE-C--CeEEEEcccCCCCCCceeEEeecCCC-ceEEcccCCccccceeEEEE----------
Q psy14726 425 KEIAPMNFKRCY-VSTAVH-H--DVIYAMGGYNGQRRQNSVEKYNYTEN-QWSLIAPMNVERSDASATTL---------- 489 (712)
Q Consensus 425 ~~~~~~~~~r~~-~~~~~~-~--~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~---------- 489 (712)
..+..+...... .+++.. + +.+++.|+.+ ..+..||..+. .|.....+........++..
T Consensus 94 ~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D-----~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 168 (316)
T 3bg1_A 94 EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD-----GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 (316)
T ss_dssp CEEEEECCCSSCCCEEEECCTTTCSCEEEECSS-----SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC----
T ss_pred eEEEEccCCCCceEEEEECCCCCCcEEEEEcCC-----CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccc
Confidence 544332211111 223332 2 5677777754 35777777665 56543222111111111111
Q ss_pred ---------CCEEEEEcccCCCCccCceEEeeCC-CCeeEEeCCCCCCCcceEEEEE--C----CEEEEEcCCCCCCccc
Q psy14726 490 ---------QGKIYITGGFNGHNCLNSCEVYDPE-CNQWTLIEPMRHRRSGVSCIAY--H----ECIYVIGGFNGMSRMC 553 (712)
Q Consensus 490 ---------~~~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p~~r~~~~~~~~--~----~~iyv~GG~~~~~~~~ 553 (712)
.++.++.||.++ .+..+|.. ...|..+..+.........+.+ + +.+++.|+.+ .
T Consensus 169 ~~~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D-----~ 238 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGGCDN-----LIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD-----G 238 (316)
T ss_dssp --CCSCCCCCCCBEECCBTTS-----BCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETT-----C
T ss_pred ccccccCccccceEEEecCCC-----eEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCC-----C
Confidence 135667776653 45566665 3457666554322222223333 2 2567777754 4
Q ss_pred eEEEEeCCC---CcEEE--cCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECC-CCeEEEccCCCCcc
Q psy14726 554 NGEKYNPVT---KTWSQ--VPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEK-TDEWYEATDMNIYR 622 (712)
Q Consensus 554 ~v~~yd~~~---~~W~~--~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p~~r 622 (712)
.+..||..+ ..|.. +... ...-.+++.. ++.+++.||.++ .+.+|+.. .+.|..+..+..+-
T Consensus 239 ~v~iw~~~~~~~~~~~~~~~~~~--~~~v~~v~~sp~g~~las~~~D~-----~v~lw~~~~~g~~~~~~~~~~~~ 307 (316)
T 3bg1_A 239 RVFIWTCDDASSNTWSPKLLHKF--NDVVWHVSWSITANILAVSGGDN-----KVTLWKESVDGQWVCISDVNKGQ 307 (316)
T ss_dssp EEEEEECSSTTCCCCBCCEEEEC--SSCEEEEEECTTTCCEEEEESSS-----CEEEEEECTTSCEEEEEECC---
T ss_pred eEEEEEccCccccchhhhhhhcC--CCcEEEEEEcCCCCEEEEEcCCC-----eEEEEEECCCCcEEEeeeccCCC
Confidence 677787765 23321 1111 1111122222 677888888765 46667654 56898887766544
No 115
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.64 E-value=0.2 Score=50.87 Aligned_cols=237 Identities=13% Similarity=0.198 Sum_probs=117.0
Q ss_pred EEEEeecCCCCCCceEEEEECCCCcEEEcccCCCC-CCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCC-----
Q psy14726 350 LFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPM-GPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTK----- 422 (712)
Q Consensus 350 i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~-~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~----- 422 (712)
+++.|+.+ ..+..+|...+.+..+...... ....-.+++.. ++.+++.|+.++ .+..+|....
T Consensus 26 ~las~~~D-----~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~-----~v~iw~~~~~~~~~~ 95 (330)
T 2hes_X 26 ILATGSTD-----RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS-----TVSIWAKEESADRTF 95 (330)
T ss_dssp EEEEEESS-----SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS-----CEEEEEC-------C
T ss_pred EEEEEcCC-----CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC-----cEEEEEcccCcCccc
Confidence 55566532 3577788776544322111111 11122233333 667777887543 4677776432
Q ss_pred cEEEeCCCCCCccee-EEEE-ECCeEEEEcccCCCCCCceeEEeecCC--CceEEcccCCccccceeEEEE--CCEEEEE
Q psy14726 423 VWKEIAPMNFKRCYV-STAV-HHDVIYAMGGYNGQRRQNSVEKYNYTE--NQWSLIAPMNVERSDASATTL--QGKIYIT 496 (712)
Q Consensus 423 ~W~~~~~~~~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~p~~r~~~~~~~~--~~~iyv~ 496 (712)
.+..+..+....... +++. .+++.++.|+.+ ..+.+||... ..+..+..+..-......+.+ ++.+++.
T Consensus 96 ~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D-----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 170 (330)
T 2hes_X 96 EMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD-----KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLAS 170 (330)
T ss_dssp CCEEEEEEC----CEEEEEECTTSCEEEEEETT-----SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred cceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC-----CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEE
Confidence 222222221111111 2222 256777777754 4578888743 345444333222222223333 5677888
Q ss_pred cccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--C--CEEEEEcCCCCCCccceEEEEeCCC------CcEE
Q psy14726 497 GGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--H--ECIYVIGGFNGMSRMCNGEKYNPVT------KTWS 566 (712)
Q Consensus 497 GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~------~~W~ 566 (712)
||.++ .+..+|..+..|+.+..+.........+.+ + +..++.|+.+ ..+..||..+ ..|.
T Consensus 171 ~s~D~-----~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D-----~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 171 SSYDD-----TVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD-----STVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp EETTS-----CEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT-----SCEEEEEEEEECTTSCEEEE
T ss_pred EcCCC-----eEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC-----CeEEEEEecCCCccccceeE
Confidence 87664 577788777777766544322222222222 2 3456666654 3455555432 2455
Q ss_pred EcCCCCC--CccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEcc
Q psy14726 567 QVPDMYN--PRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 567 ~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 616 (712)
....++. ...-.+++...+.+++.||.++ .+.+||..++.|..+.
T Consensus 241 ~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg-----~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 241 CEAILPDVHKRQVYNVAWGFNGLIASVGADG-----VLAVYEEVDGEWKVFA 287 (330)
T ss_dssp EEEECCSCCSSCEEEEEECTTSCEEEEETTS-----CEEEEEEETTEEEEEE
T ss_pred EeeecccccccceEEEEEcCCCEEEEEeCCC-----EEEEEEcCCCceEEEe
Confidence 5443332 1222233333455677777665 5778888888886553
No 116
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.64 E-value=0.51 Score=53.22 Aligned_cols=118 Identities=14% Similarity=0.193 Sum_probs=73.7
Q ss_pred EEEECCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCCC--------cceeEEEEECCeEEEEcccCCCCCCcee
Q psy14726 392 TAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFK--------RCYVSTAVHHDVIYAMGGYNGQRRQNSV 461 (712)
Q Consensus 392 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~v 461 (712)
-++.++.||+... ...++.+|..+++ |+.-...+.. ....+.++.+++||+... ...+
T Consensus 62 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l 129 (668)
T 1kv9_A 62 PLFHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------DGRL 129 (668)
T ss_dssp CEEETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------TSEE
T ss_pred CEEECCEEEEECC------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC------CCEE
Confidence 3456999998865 2469999998876 8764433211 012335667889988642 2469
Q ss_pred EEeecCCCc--eEEcccCCc--cccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCe--eEEe
Q psy14726 462 EKYNYTENQ--WSLIAPMNV--ERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLI 521 (712)
Q Consensus 462 ~~yd~~~~~--W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 521 (712)
+.+|..|.+ |+.-..-+. .....+.++.++.+|+..+.........+..||..+++ |+.-
T Consensus 130 ~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 130 IALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 999988765 876432211 12223445678998875432211234579999998876 8764
No 117
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.63 E-value=0.18 Score=58.29 Aligned_cols=209 Identities=9% Similarity=0.085 Sum_probs=117.1
Q ss_pred eEEEEECCCCcEEEcccCCCCCC-CcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCC--C--CC-cce
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGP-RAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPM--N--FK-RCY 436 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~-r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~--~--~~-r~~ 436 (712)
.+..||+.++++..+.......+ ..-.++... ++.|++... ..+++||+.+++|...... + .+ ..-
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i 500 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-------SALVRFNPEQRSFTTIEKEKDGTPVVSKQI 500 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-------SCEEEEETTTTEEEECCBCTTCCBCCCCCE
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-------CceeEEeCCCCeEEEccccccccccCCceE
Confidence 57788888888776532111111 111222222 566766432 3489999999999887543 1 11 111
Q ss_pred eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccC---Ccccccee-EEEE--CCEEEEEcccCCCCccCceE
Q psy14726 437 VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM---NVERSDAS-ATTL--QGKIYITGGFNGHNCLNSCE 509 (712)
Q Consensus 437 ~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---p~~r~~~~-~~~~--~~~iyv~GG~~~~~~~~~v~ 509 (712)
.++.. -+|.|++... .-+++||+.++++ ..... +....... +... +|.|++... ..+.
T Consensus 501 ~~i~~d~~g~lWigt~-------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-------~Gl~ 565 (795)
T 4a2l_A 501 TTLFRDSHKRLWIGGE-------EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-------EGFY 565 (795)
T ss_dssp EEEEECTTCCEEEEES-------SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-------SCEE
T ss_pred EEEEECCCCCEEEEeC-------CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-------CCce
Confidence 22222 3567887532 3489999999888 43311 10111111 2222 577887432 2489
Q ss_pred EeeCCCCeeEEeC---CCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC---CCCCCccce-EEE
Q psy14726 510 VYDPECNQWTLIE---PMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP---DMYNPRSNF-AIE 581 (712)
Q Consensus 510 ~yd~~~~~W~~~~---~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~r~~~-~~~ 581 (712)
+||+.+++++... .+|.... .+++.- +|.|++.+. ..+.+|||++.++.... .++...... +++
T Consensus 566 ~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~ 637 (795)
T 4a2l_A 566 CFNEKDKQIKRYNTTNGLPNNVV-YGILEDSFGRLWLSTN-------RGISCFNPETEKFRNFTESDGLQSNQFNTASYC 637 (795)
T ss_dssp EEETTTTEEEEECGGGTCSCSCE-EEEEECTTSCEEEEET-------TEEEEEETTTTEEEEECGGGTCSCSCEEEEEEE
T ss_pred eECCCCCcEEEeCCCCCCchhhe-EEEEECCCCCEEEEcC-------CceEEEcCCCCcEEEcCCcCCCccccCccCcee
Confidence 9999999998775 2443322 233332 578888763 56889999999988763 244333322 333
Q ss_pred EE-CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 582 VI-DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 582 ~~-~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
.. +|.|| +||.+| +..|||+.
T Consensus 638 ~~~~G~l~-~g~~~G------l~~~~p~~ 659 (795)
T 4a2l_A 638 RTSVGQMY-FGGING------ITTFRPEL 659 (795)
T ss_dssp ECTTSCEE-EEETTE------EEEECGGG
T ss_pred ECCCCeEE-EecCCc------eEEEcHHH
Confidence 33 45555 466543 56677654
No 118
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.62 E-value=0.71 Score=46.66 Aligned_cols=225 Identities=10% Similarity=0.051 Sum_probs=123.1
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCC--cEEEeCCCC-------C
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTK--VWKEIAPMN-------F 432 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~~-------~ 432 (712)
..+..+|+.+++...... ...-..-+++++. ++.+|+.... ...+.+||+... .-..+.... .
T Consensus 69 ~~i~~~d~~~g~~~~~~~--~~~~~~p~gia~d~~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~ 141 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSG--KNLFYLPHGLSIDTDGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQPGSDQNH 141 (329)
T ss_dssp CCEEEECTTTCCEEEEEC--TTTCSSEEEEEECTTSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBCCCSTTC
T ss_pred CcEEEEECCCCeEEeccC--CCccCCceEEEECCCCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCCCCCccc
Confidence 358899998777654211 1111233455555 6778887653 256899998765 223332211 1
Q ss_pred CcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCceEEcccC-------CccccceeEEEE--C-CEEEEEcccC
Q psy14726 433 KRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM-------NVERSDASATTL--Q-GKIYITGGFN 500 (712)
Q Consensus 433 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-------p~~r~~~~~~~~--~-~~iyv~GG~~ 500 (712)
...-..+++. ++.|||..+.. .+.+.+||+....-..+... +........+.+ + +.|||....+
T Consensus 142 ~~~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~ 217 (329)
T 3fvz_A 142 FCQPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN 217 (329)
T ss_dssp CSSEEEEEECTTTCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT
T ss_pred cCCCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC
Confidence 1123345554 68999987521 25789999665543333211 111122333333 4 8999987543
Q ss_pred CCCccCceEEeeCCCCeeEEeCCCC-CCCcceEEEEECCEEEEEcCCC--CCCccceEEEEeCCCCcEEEc-CCCCCCcc
Q psy14726 501 GHNCLNSCEVYDPECNQWTLIEPMR-HRRSGVSCIAYHECIYVIGGFN--GMSRMCNGEKYNPVTKTWSQV-PDMYNPRS 576 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~ 576 (712)
+.+.+||+.+++....-..+ ....-.+++...+.+|...|.. .......+..+|+.+.+.... +..+....
T Consensus 218 -----~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~ 292 (329)
T 3fvz_A 218 -----GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFD 292 (329)
T ss_dssp -----TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCS
T ss_pred -----CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccC
Confidence 57999999877654432222 2222233444457788877732 122245789999888766554 22122222
Q ss_pred -ceEEEEE-CCEEEEEcccCCCceeeeEEEEECC
Q psy14726 577 -NFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 577 -~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
-.++++- ++.|||....++ .|.+|++.
T Consensus 293 ~p~~ia~~~dG~lyvad~~~~-----~I~~~~~~ 321 (329)
T 3fvz_A 293 MPHDIVASEDGTVYIGDAHTN-----TVWKFTLT 321 (329)
T ss_dssp SEEEEEECTTSEEEEEESSSC-----CEEEEEEE
T ss_pred CeeEEEECCCCCEEEEECCCC-----EEEEEeCC
Confidence 2333333 678998865433 57777764
No 119
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.58 E-value=0.55 Score=53.12 Aligned_cols=118 Identities=18% Similarity=0.264 Sum_probs=73.6
Q ss_pred EEEECCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCCC--------cceeEEEEECCeEEEEcccCCCCCCcee
Q psy14726 392 TAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFK--------RCYVSTAVHHDVIYAMGGYNGQRRQNSV 461 (712)
Q Consensus 392 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~v 461 (712)
-++.++.||+.+. ...++.+|..+++ |+.-...+.. ....+.++.+++||+.+. ...+
T Consensus 66 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------dg~l 133 (689)
T 1yiq_A 66 PIVVDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------DGRL 133 (689)
T ss_dssp CEEETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc------CCEE
Confidence 3456999998765 2469999998876 8764333211 012234667899988643 2468
Q ss_pred EEeecCCCc--eEEccc-CCc--cccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCe--eEEe
Q psy14726 462 EKYNYTENQ--WSLIAP-MNV--ERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLI 521 (712)
Q Consensus 462 ~~yd~~~~~--W~~~~~-~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 521 (712)
+.+|..|.+ |+.-.. -+. .....+.++.++.+|+-.+.........+..||..|++ |+.-
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 134 EAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 999998764 876542 111 12223345679998884332211234579999999877 8765
No 120
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.56 E-value=0.38 Score=48.87 Aligned_cols=243 Identities=10% Similarity=0.085 Sum_probs=117.3
Q ss_pred EEEeecCCCC-CCceEEEEECCCCcEEEcccC-CCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 351 FAIGGWSGGS-PTDFVETYDTRADRWVKIEQV-DPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 351 ~~~GG~~~~~-~~~~v~~~d~~~~~W~~~~~~-~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
+.+|.+.... ..-.++.+|..++++..+... ....| ..+++. ++++|+.+... ....++.||..+++++.+
T Consensus 5 ~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p---~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~ 78 (347)
T 3hfq_A 5 ILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNP---TYLALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKL 78 (347)
T ss_dssp EEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCC---CCEEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEE
T ss_pred EEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCc---ceEEEccCCeEEEEEecC---CCceEEEEEecCCcEEEe
Confidence 4556554322 122367778888887653211 11112 223333 67777776421 125689999988887766
Q ss_pred CCCCC-CcceeEEE-EECCe-EEEEcccCCCCCCceeEEeecC-CCceEEcccCCc------ccc---ceeEEEE--CCE
Q psy14726 428 APMNF-KRCYVSTA-VHHDV-IYAMGGYNGQRRQNSVEKYNYT-ENQWSLIAPMNV------ERS---DASATTL--QGK 492 (712)
Q Consensus 428 ~~~~~-~r~~~~~~-~~~~~-iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p~------~r~---~~~~~~~--~~~ 492 (712)
..... ...-..++ .-+++ ||+.+.. ...+.+||.. +.+...+...+. .|. ....+.+ +++
T Consensus 79 ~~~~~~~~~p~~~a~spdg~~l~~~~~~-----~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~ 153 (347)
T 3hfq_A 79 NTVVAPGTPPAYVAVDEARQLVYSANYH-----KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR 153 (347)
T ss_dssp EEEEEESCCCSEEEEETTTTEEEEEETT-----TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC
T ss_pred eeeecCCCCCEEEEECCCCCEEEEEeCC-----CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc
Confidence 54221 11112233 34554 6665421 2467778774 334443322211 111 1122333 667
Q ss_pred EEEEcccCCCCccCceEEeeCC-CCeeEEeCC--CCCC-CcceEEEEECC-EEEEEcCCCCCCccceEEEE--eCCCCcE
Q psy14726 493 IYITGGFNGHNCLNSCEVYDPE-CNQWTLIEP--MRHR-RSGVSCIAYHE-CIYVIGGFNGMSRMCNGEKY--NPVTKTW 565 (712)
Q Consensus 493 iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~--~p~~-r~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~y--d~~~~~W 565 (712)
+|+.+..+ +.+.+||.. +++...+.. .+.. ...+.+..-++ .+|+.+..+ ..+..| +..+.++
T Consensus 154 l~v~~~~~-----~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~ 223 (347)
T 3hfq_A 154 LAVIDLGS-----DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS-----SQIASLKYDTQTGAF 223 (347)
T ss_dssp EEEEETTT-----TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEEETTTTEE
T ss_pred EEEEeCCC-----CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC-----CEEEEEEecCCCCce
Confidence 77765432 468888887 565554432 2211 11122222245 488875432 344444 5445666
Q ss_pred EEcC---CCCCC---ccceEEEEE--CC-EEEEEcccCCCceeeeEEEEECCC-CeEEEccCCC
Q psy14726 566 SQVP---DMYNP---RSNFAIEVI--DD-MIFAIGGFNGVTTIYHVECYDEKT-DEWYEATDMN 619 (712)
Q Consensus 566 ~~~~---~~p~~---r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p 619 (712)
..+. ..+.. ......+.+ ++ .||+.+..+ +.+.+||... +++..+..++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~-----~~v~v~~~~~~g~~~~~~~~~ 282 (347)
T 3hfq_A 224 TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY-----NTLAVFAVTADGHLTLIQQIS 282 (347)
T ss_dssp EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT-----TEEEEEEECGGGCEEEEEEEE
T ss_pred EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC-----CEEEEEEECCCCcEEEeEEEe
Confidence 5442 22221 122233333 45 477765432 3577888753 3555554433
No 121
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.55 E-value=0.19 Score=51.34 Aligned_cols=180 Identities=14% Similarity=0.198 Sum_probs=95.6
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+.+++.||.+ ..|..+|...+.|.............-.+++.. ++..++.|+.++ .+..+|..++.+..
T Consensus 28 g~~las~~~D-----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 28 GTLLASCGGD-----RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKKNQDDFEC 97 (345)
T ss_dssp SSCEEEEETT-----SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECCC-EEE
T ss_pred CCEEEEEcCC-----CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEccCCCeEE
Confidence 3456666643 357788888877753211111111222233333 667777887543 46778877776655
Q ss_pred eCCCCCCccee-EEEE-ECCeEEEEcccCCCCCCceeEEeecCCC-ceEEcccCCccccceeEEEE--CCEEEEEcccCC
Q psy14726 427 IAPMNFKRCYV-STAV-HHDVIYAMGGYNGQRRQNSVEKYNYTEN-QWSLIAPMNVERSDASATTL--QGKIYITGGFNG 501 (712)
Q Consensus 427 ~~~~~~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 501 (712)
+..+....... +++. .+++.++.|+.+ ..+..||..+. .+..+..+.........+.+ ++.+++.|+.++
T Consensus 98 ~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~ 172 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAPSGNLLATCSRD-----KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD 172 (345)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS
T ss_pred EEEccCCCCCceEEEEeCCCCEEEEEECC-----CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC
Confidence 44333222222 2222 256777888754 45788887664 33333222211122222333 567777787664
Q ss_pred CCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCC
Q psy14726 502 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFN 547 (712)
Q Consensus 502 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 547 (712)
.+..||..++.|.....+.........+.+ ++..++.|+.+
T Consensus 173 -----~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 173 -----TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp -----CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred -----cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC
Confidence 578888888888765444322222223333 56677777754
No 122
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.55 E-value=0.33 Score=48.65 Aligned_cols=214 Identities=11% Similarity=0.031 Sum_probs=110.4
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..++.|+. ...+..||..+++.......... ...-.+++.. ++..++.|+.+ ..+..||..+++...
T Consensus 109 ~~~l~~~~~-----d~~i~~~d~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 109 GCTLIVGGE-----ASTLSIWDLAAPTPRIKAELTSS-APACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVR 177 (337)
T ss_dssp SSEEEEEES-----SSEEEEEECCCC--EEEEEEECS-SSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCEEEEEcC-----CCcEEEEECCCCCcceeeecccC-CCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCceee
Confidence 334555553 24688899888764332111111 1112233333 56677777754 358899998876543
Q ss_pred eCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCC
Q psy14726 427 IAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHN 503 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 503 (712)
.-...... -.+++. .++..++.|+.+ ..+..||..+.+-...-..+. . ...+.+ +++.+++|+.++
T Consensus 178 ~~~~~~~~-i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~--~-v~~~~~s~~~~~l~~~~~~~-- 246 (337)
T 1gxr_A 178 QFQGHTDG-ASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHDFTS--Q-IFSLGYCPTGEWLAVGMESS-- 246 (337)
T ss_dssp EECCCSSC-EEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECSS--C-EEEEEECTTSSEEEEEETTS--
T ss_pred eeecccCc-eEEEEECCCCCEEEEEecC-----CcEEEEECCCCceEeeecCCC--c-eEEEEECCCCCEEEEEcCCC--
Confidence 32222221 122232 256677777643 468999988775433222111 1 122222 567777776553
Q ss_pred ccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE
Q psy14726 504 CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV 582 (712)
Q Consensus 504 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~ 582 (712)
.+..||..+..-........ .-.++... ++.+++.|+.+ ..+..||..+.+-...... ...-.+++.
T Consensus 247 ---~i~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~~~~~~~~~--~~~v~~~~~ 314 (337)
T 1gxr_A 247 ---NVEVLHVNKPDKYQLHLHES--CVLSLKFAYCGKWFVSTGKD-----NLLNAWRTPYGASIFQSKE--SSSVLSCDI 314 (337)
T ss_dssp ---CEEEEETTSSCEEEECCCSS--CEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEEC--SSCEEEEEE
T ss_pred ---cEEEEECCCCCeEEEcCCcc--ceeEEEECCCCCEEEEecCC-----CcEEEEECCCCeEEEEecC--CCcEEEEEE
Confidence 58889988776433322211 11222222 46666777653 5788999887764432211 111122222
Q ss_pred E-CCEEEEEcccCC
Q psy14726 583 I-DDMIFAIGGFNG 595 (712)
Q Consensus 583 ~-~~~i~v~GG~~~ 595 (712)
. ++..++.|+.++
T Consensus 315 s~~~~~l~~~~~dg 328 (337)
T 1gxr_A 315 SVDDKYIVTGSGDK 328 (337)
T ss_dssp CTTSCEEEEEETTS
T ss_pred CCCCCEEEEecCCC
Confidence 2 667777777665
No 123
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.48 E-value=0.49 Score=49.35 Aligned_cols=226 Identities=9% Similarity=0.015 Sum_probs=114.8
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEE-
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWK- 425 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~- 425 (712)
+..++.|+.+ ..+..||..++.-... .. .....-.+++.. ++.+++.|+.+ ..+..||..+.+-.
T Consensus 109 ~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~-~h~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~ 175 (420)
T 3vl1_A 109 MRRFILGTTE-----GDIKVLDSNFNLQREI--DQ-AHVSEITKLKFFPSGEALISSSQD-----MQLKIWSVKDGSNPR 175 (420)
T ss_dssp SCEEEEEETT-----SCEEEECTTSCEEEEE--TT-SSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCCCE
T ss_pred CCEEEEEECC-----CCEEEEeCCCcceeee--cc-cccCccEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCcCce
Confidence 3455666532 3578888887765442 11 111222333333 56677777753 36889998876421
Q ss_pred EeCCCCCCcceeEEEEE-CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCC-ccccceeEE----------------
Q psy14726 426 EIAPMNFKRCYVSTAVH-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMN-VERSDASAT---------------- 487 (712)
Q Consensus 426 ~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~---------------- 487 (712)
.+.. ....-.+++.. ++..++.|+.+ ..+..||..+.+-...-..+ .........
T Consensus 176 ~~~~--h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 248 (420)
T 3vl1_A 176 TLIG--HRATVTDIAIIDRGRNVLSASLD-----GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTS 248 (420)
T ss_dssp EEEC--CSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCC
T ss_pred EEcC--CCCcEEEEEEcCCCCEEEEEcCC-----CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccC
Confidence 1111 11111223332 56677777754 35888888776532221111 011111111
Q ss_pred -------EECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCE-EEEEcCCCCCCccceEEEE
Q psy14726 488 -------TLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HEC-IYVIGGFNGMSRMCNGEKY 558 (712)
Q Consensus 488 -------~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~y 558 (712)
.-+++.++.|+.++ .+..||..+.+-...-.......-.+++.. ++. +++.|+.+ ..+..|
T Consensus 249 ~v~~~~~s~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d-----g~i~vw 318 (420)
T 3vl1_A 249 KKNNLEFGTYGKYVIAGHVSG-----VITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN-----GMLAQW 318 (420)
T ss_dssp CCCTTCSSCTTEEEEEEETTS-----CEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETT-----SEEEEE
T ss_pred cccceEEcCCCCEEEEEcCCC-----eEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCC-----CeEEEE
Confidence 12567777777654 588899887653222211111112222222 344 67777654 578899
Q ss_pred eCCCCcE--EEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 559 NPVTKTW--SQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 559 d~~~~~W--~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
|..+.+- ..+... ....-.++...++.+++.||.++ .+.+||+..
T Consensus 319 d~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~l~s~~~d~-----~v~iw~~~~ 365 (420)
T 3vl1_A 319 DLRSPECPVGEFLIN-EGTPINNVYFAAGALFVSSGFDT-----SIKLDIISD 365 (420)
T ss_dssp ETTCTTSCSEEEEES-TTSCEEEEEEETTEEEEEETTTE-----EEEEEEECC
T ss_pred EcCCCcCchhhhhcc-CCCCceEEEeCCCCEEEEecCCc-----cEEEEeccC
Confidence 9877531 222110 11122233444888888888764 567777654
No 124
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.48 E-value=0.76 Score=45.26 Aligned_cols=231 Identities=9% Similarity=0.001 Sum_probs=119.6
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCc--EEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCc-
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADR--WVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKV- 423 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~--W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~- 423 (712)
+.+++.|.. ...+.++|+.+++ |.. ... .....+.+.+. ++.+++.+ .+.++.||+ +++
T Consensus 5 ~~~lv~~~~-----~~~v~~~d~~tG~~~w~~--~~~--~~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G~~ 67 (276)
T 3no2_A 5 QHLLVGGSG-----WNKIAIINKDTKEIVWEY--PLE--KGWECNSVAATKAGEILFSY-------SKGAKMITR-DGRE 67 (276)
T ss_dssp CEEEEECTT-----CSEEEEEETTTTEEEEEE--ECC--TTCCCCEEEECTTSCEEEEC-------BSEEEEECT-TSCE
T ss_pred CcEEEeeCC-----CCEEEEEECCCCeEEEEe--CCC--ccCCCcCeEECCCCCEEEeC-------CCCEEEECC-CCCE
Confidence 345555542 3568889987775 654 211 11123444444 77788733 246999999 554
Q ss_pred -EEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCc-eEEcc--cC--CccccceeEEEECCEEEEE
Q psy14726 424 -WKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQ-WSLIA--PM--NVERSDASATTLQGKIYIT 496 (712)
Q Consensus 424 -W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~--~~--p~~r~~~~~~~~~~~iyv~ 496 (712)
|+.-.+ .....+++.. .+|++++..+.. ...++.+|+..+. |+.-. .. +...........+|.+++.
T Consensus 68 ~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~ 141 (276)
T 3no2_A 68 LWNIAAP--AGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVP 141 (276)
T ss_dssp EEEEECC--TTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEE
T ss_pred EEEEcCC--CCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEE
Confidence 664332 1122233333 467777764321 2468888885542 44321 11 1111222233336676665
Q ss_pred cccCCCCccCceEEeeCCCCe--eEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCC--cEEEcC-CC
Q psy14726 497 GGFNGHNCLNSCEVYDPECNQ--WTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTK--TWSQVP-DM 571 (712)
Q Consensus 497 GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~-~~ 571 (712)
...+ ..|.+||++ ++ |+.-.+. .+ ..+....++.+++.+..+ ..+..+|+++. .|+.-. ..
T Consensus 142 ~~~~-----~~v~~~d~~-G~~~w~~~~~~-~~--~~~~~~~~g~~~v~~~~~-----~~v~~~d~~tG~~~w~~~~~~~ 207 (276)
T 3no2_A 142 LFAT-----SEVREIAPN-GQLLNSVKLSG-TP--FSSAFLDNGDCLVACGDA-----HCFVQLNLESNRIVRRVNANDI 207 (276)
T ss_dssp ETTT-----TEEEEECTT-SCEEEEEECSS-CC--CEEEECTTSCEEEECBTT-----SEEEEECTTTCCEEEEEEGGGS
T ss_pred ecCC-----CEEEEECCC-CCEEEEEECCC-Cc--cceeEcCCCCEEEEeCCC-----CeEEEEeCcCCcEEEEecCCCC
Confidence 5422 468999987 44 7665431 11 122333367888877642 46999999965 477642 22
Q ss_pred CCCcc--ceEEEEE-CCEEEEEc--ccCCCc---eeeeEEEEECCCC-eEEEc
Q psy14726 572 YNPRS--NFAIEVI-DDMIFAIG--GFNGVT---TIYHVECYDEKTD-EWYEA 615 (712)
Q Consensus 572 p~~r~--~~~~~~~-~~~i~v~G--G~~~~~---~~~~v~~yd~~~~-~W~~~ 615 (712)
+..+. -.+++.. ++.+|+.. |..... ....+..+|++.+ .|+.-
T Consensus 208 ~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~ 260 (276)
T 3no2_A 208 EGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLN 260 (276)
T ss_dssp BSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEEC
T ss_pred CCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEEec
Confidence 22222 1233333 88888876 543200 1123555665443 46544
No 125
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.47 E-value=0.45 Score=48.32 Aligned_cols=186 Identities=15% Similarity=0.185 Sum_probs=96.1
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEE-EECCeEEEEcccCCCCCCceeEEeecCCCc--eE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA-VHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WS 472 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~ 472 (712)
++.+++.||.+ ..+..+|..+.+-...-+..... -.+++ ..++..++.||.+ ..+..||..+.. ..
T Consensus 66 d~~~l~s~s~D-----g~v~iWd~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~s~~~d-----~~v~iw~~~~~~~~~~ 134 (340)
T 1got_B 66 DSRLLLSASQD-----GKLIIWDSYTTNKVHAIPLRSSW-VMTCAYAPSGNYVACGGLD-----NICSIYNLKTREGNVR 134 (340)
T ss_dssp TSSEEEEEETT-----TEEEEEETTTCCEEEEEECSSSC-EEEEEECTTSSEEEEEETT-----CEEEEEETTTCSBSCE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCCcceEeecCCcc-EEEEEECCCCCEEEEEeCC-----CeEEEEECccCCCcce
Confidence 45566667654 35788888776543222222111 12222 2356777778754 467888876643 12
Q ss_pred EcccCCccccceeEE--EECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCC
Q psy14726 473 LIAPMNVERSDASAT--TLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNG 548 (712)
Q Consensus 473 ~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 548 (712)
....+........++ .-++. ++.|+.+ ..+..||..+++-... +.........+.+ ++.+++.|+.+
T Consensus 135 ~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d- 205 (340)
T 1got_B 135 VSRELAGHTGYLSCCRFLDDNQ-IVTSSGD-----TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACD- 205 (340)
T ss_dssp EEEEEECCSSCEEEEEEEETTE-EEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-
T ss_pred eEEEecCCCccEEEEEECCCCc-EEEEECC-----CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCC-
Confidence 111111111111112 22556 4555544 3588899888764332 1111111222222 56778888764
Q ss_pred CCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 549 MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 549 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
..+..||..+..-...- .........+.+ ++..++.|+.++ .+.+||..+++-
T Consensus 206 ----~~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~p~~~~l~s~s~d~-----~v~iwd~~~~~~ 260 (340)
T 1got_B 206 ----ASAKLWDVREGMCRQTF--TGHESDINAICFFPNGNAFATGSDDA-----TCRLFDLRADQE 260 (340)
T ss_dssp ----SCEEEEETTTCSEEEEE--CCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEE
T ss_pred ----CcEEEEECCCCeeEEEE--cCCcCCEEEEEEcCCCCEEEEEcCCC-----cEEEEECCCCcE
Confidence 46788998776433221 111111222222 677888888765 578889887654
No 126
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.47 E-value=0.62 Score=52.77 Aligned_cols=248 Identities=7% Similarity=0.002 Sum_probs=131.4
Q ss_pred CCCceEEEEECCCCcEEEcccCC-CCC-CCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcc
Q psy14726 360 SPTDFVETYDTRADRWVKIEQVD-PMG-PRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRC 435 (712)
Q Consensus 360 ~~~~~v~~~d~~~~~W~~~~~~~-~~~-~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~ 435 (712)
.....++..+...+.|..+.... +.. .........+ +++.++++...++.....++.+|..+++......++....
T Consensus 91 ~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~ 170 (695)
T 2bkl_A 91 KEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKY 170 (695)
T ss_dssp CSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTT
T ss_pred CeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccc
Confidence 34556778887777777653211 110 1111222222 6666666554333344689999999988641112222221
Q ss_pred eeEEEEECCeEEEEcccCCC--------CCCceeEEeecCCCce--EEcccCCccccceeEEEE--CCEEEEEcccCCCC
Q psy14726 436 YVSTAVHHDVIYAMGGYNGQ--------RRQNSVEKYNYTENQW--SLIAPMNVERSDASATTL--QGKIYITGGFNGHN 503 (712)
Q Consensus 436 ~~~~~~~~~~iyv~GG~~~~--------~~~~~v~~yd~~~~~W--~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 503 (712)
......-+|+.++++..... .....+++++..+..- ..+...+..........+ +|+..+++...+.
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~- 249 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW- 249 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-
Confidence 22223346676666654322 2345699999887763 233222222112222233 5654444443321
Q ss_pred ccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCc---EEEcCCCCCCccceEE
Q psy14726 504 CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT---WSQVPDMYNPRSNFAI 580 (712)
Q Consensus 504 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~~r~~~~~ 580 (712)
..+.++.+|..+..|..+..-.... ...+..++.+|+....+ .....++.+|..+.. |+.+-.......-.++
T Consensus 250 ~~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~ 325 (695)
T 2bkl_A 250 SENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFYVLTDEG--APRQRVFEVDPAKPARASWKEIVPEDSSASLLSV 325 (695)
T ss_dssp TEEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEEEEECTT--CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEE
T ss_pred CceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEEEEECCC--CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEE
Confidence 2457888888777888876432222 22233566666664432 224689999987654 8877432212222334
Q ss_pred EEECCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 581 EVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 581 ~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
+..++.+++.+..++ ...++++|+..+.-..+
T Consensus 326 ~~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 326 SIVGGHLSLEYLKDA---TSEVRVATLKGKPVRTV 357 (695)
T ss_dssp EEETTEEEEEEEETT---EEEEEEEETTCCEEEEC
T ss_pred EEECCEEEEEEEECC---EEEEEEEeCCCCeeEEe
Confidence 445889888876654 34688888765544443
No 127
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.47 E-value=0.34 Score=49.68 Aligned_cols=226 Identities=12% Similarity=0.119 Sum_probs=112.1
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
..++.||.+ ..+..+|..+...... ...+.. .-.+++.. ++..++.||.+ ..+..|+.....-...
T Consensus 77 ~~l~s~s~D-----g~v~vWd~~~~~~~~~--~~~~~~-~v~~~~~sp~g~~lasg~~d-----~~i~v~~~~~~~~~~~ 143 (354)
T 2pbi_B 77 RRIVSSSQD-----GKVIVWDSFTTNKEHA--VTMPCT-WVMACAYAPSGCAIACGGLD-----NKCSVYPLTFDKNENM 143 (354)
T ss_dssp SEEEEEETT-----SEEEEEETTTCCEEEE--EECSSS-CCCEEEECTTSSEEEEESTT-----SEEEEEECCCCTTCCS
T ss_pred CEEEEEeCC-----CeEEEEECCCCCcceE--EecCCC-CEEEEEECCCCCEEEEeeCC-----CCEEEEEEeccccccc
Confidence 455566532 3577788766654431 111111 11223333 66777788754 3466676543320000
Q ss_pred CC----CCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE----CCEEEEEc
Q psy14726 428 AP----MNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL----QGKIYITG 497 (712)
Q Consensus 428 ~~----~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~G 497 (712)
.. +...... .+++. .++..++.|+.+ ..+..||+.+.+.... +........+..+ ++..++.|
T Consensus 144 ~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D-----~~v~lwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sg 216 (354)
T 2pbi_B 144 AAKKKSVAMHTNYLSACSFTNSDMQILTASGD-----GTCALWDVESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSG 216 (354)
T ss_dssp GGGCEEEEECSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEE
T ss_pred cccceeeeccCCcEEEEEEeCCCCEEEEEeCC-----CcEEEEeCCCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEE
Confidence 00 0000011 12222 234455555533 4688899888764322 1100111112222 35778888
Q ss_pred ccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCc
Q psy14726 498 GFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPR 575 (712)
Q Consensus 498 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 575 (712)
|.++ .+..||..+.+....- ........++.+ ++..++.|+.+ ..+..||..+..-...-......
T Consensus 217 s~Dg-----~v~~wd~~~~~~~~~~--~~h~~~v~~v~~~p~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~~~~~ 284 (354)
T 2pbi_B 217 GCDK-----KAMVWDMRSGQCVQAF--ETHESDVNSVRYYPSGDAFASGSDD-----ATCRLYDLRADREVAIYSKESII 284 (354)
T ss_dssp ETTS-----CEEEEETTTCCEEEEE--CCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCTTCC
T ss_pred eCCC-----eEEEEECCCCcEEEEe--cCCCCCeEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEcCCCcc
Confidence 7764 5888998887653321 111112222333 56677777764 46788998876433221111112
Q ss_pred cceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 576 SNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 576 ~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
.....+.+ ++.+++.|+.++ .+.+||..+++
T Consensus 285 ~~~~~~~~s~~g~~l~~g~~d~-----~i~vwd~~~~~ 317 (354)
T 2pbi_B 285 FGASSVDFSLSGRLLFAGYNDY-----TINVWDVLKGS 317 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCS
T ss_pred cceeEEEEeCCCCEEEEEECCC-----cEEEEECCCCc
Confidence 22333333 677888887654 57888986654
No 128
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.45 E-value=0.3 Score=49.70 Aligned_cols=235 Identities=10% Similarity=0.045 Sum_probs=114.7
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..++.|+.+ ..+..||..+++-... .... ...-.+++.. ++..++.|+.+ ..+..||..+++...
T Consensus 44 ~~~l~~~~~d-----g~i~vwd~~~~~~~~~--~~~h-~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 44 GDLLFSCSKD-----SSASVWYSLNGERLGT--LDGH-TGTIWSIDVDCFTKYCVTGSAD-----YSIKLWDVSNGQCVA 110 (369)
T ss_dssp SCEEEEEESS-----SCEEEEETTTCCEEEE--ECCC-SSCEEEEEECTTSSEEEEEETT-----TEEEEEETTTCCEEE
T ss_pred CCEEEEEeCC-----CEEEEEeCCCchhhhh--hhhc-CCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEE
Confidence 3455555532 3577888877665432 1111 1112233333 56677777753 468999998877544
Q ss_pred eCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCc----eEEcccCC-----ccc--cceeEEEE--CCE
Q psy14726 427 IAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQ----WSLIAPMN-----VER--SDASATTL--QGK 492 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~----W~~~~~~p-----~~r--~~~~~~~~--~~~ 492 (712)
.-..+. .-.+++. .++..++.|+.+.......+..||..+.. +......+ ... ....++.+ +++
T Consensus 111 ~~~~~~--~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (369)
T 3zwl_B 111 TWKSPV--PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK 188 (369)
T ss_dssp EEECSS--CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC
T ss_pred EeecCC--CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC
Confidence 333221 1222222 35566666654422233567778766543 22111111 000 12222333 566
Q ss_pred EEEEcccCCCCccCceEEeeCCC-CeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC
Q psy14726 493 IYITGGFNGHNCLNSCEVYDPEC-NQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP 569 (712)
Q Consensus 493 iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 569 (712)
.++.|+.+ ..+..||..+ ..-... +.........+.+ ++..++.|+.+ ..+..||..+.+....-
T Consensus 189 ~l~~~~~d-----g~i~i~d~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 189 YIIAGHKD-----GKISKYDVSNNYEYVDS--IDLHEKSISDMQFSPDLTYFITSSRD-----TNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp EEEEEETT-----SEEEEEETTTTTEEEEE--EECCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEE
T ss_pred EEEEEcCC-----CEEEEEECCCCcEeEEE--EecCCCceeEEEECCCCCEEEEecCC-----ceEEEEECCCCceeeee
Confidence 77777655 3688999887 332211 1111122222222 56666666643 47889998876544332
Q ss_pred CCCCCccceEEEEE-CCEEEEEcccCCCc---------eeeeEEEEECCCCe
Q psy14726 570 DMYNPRSNFAIEVI-DDMIFAIGGFNGVT---------TIYHVECYDEKTDE 611 (712)
Q Consensus 570 ~~p~~r~~~~~~~~-~~~i~v~GG~~~~~---------~~~~v~~yd~~~~~ 611 (712)
... .....++.. ++..+++|+.++.. ....+.+||..+.+
T Consensus 257 ~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 257 ETD--CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp ECS--SCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred cCC--CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 211 111222222 55666666654421 11257888877654
No 129
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.43 E-value=0.069 Score=54.74 Aligned_cols=180 Identities=9% Similarity=0.144 Sum_probs=99.4
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCC--CcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF--KRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWS 472 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~--~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 472 (712)
++.+++.||.+ ..+..+|..+++|.....+.. ...-.+++. .+++.++.|+.+ ..+..||..+..+.
T Consensus 27 ~g~~las~~~D-----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-----~~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 27 AGTLLASCGGD-----RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD-----ATTCIWKKNQDDFE 96 (345)
T ss_dssp TSSCEEEEETT-----SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECCC-EE
T ss_pred CCCEEEEEcCC-----CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC-----CcEEEEEccCCCeE
Confidence 56677777754 357888888888754322211 111122332 357777888754 35778888777766
Q ss_pred EcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCe-eEEeCCCCCCCcceEEEEE--CCEEEEEcCCC
Q psy14726 473 LIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ-WTLIEPMRHRRSGVSCIAY--HECIYVIGGFN 547 (712)
Q Consensus 473 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 547 (712)
.+..+..-.....++.+ ++++++.|+.++ .+..||..+.. +..+..+.........+.. ++.+++.|+.+
T Consensus 97 ~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d 171 (345)
T 3fm0_A 97 CVTTLEGHENEVKSVAWAPSGNLLATCSRDK-----SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD 171 (345)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT
T ss_pred EEEEccCCCCCceEEEEeCCCCEEEEEECCC-----eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC
Confidence 55443322222233333 677888887664 57777776542 3333322211122222222 56677777764
Q ss_pred CCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCC
Q psy14726 548 GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNG 595 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 595 (712)
..+..||..+..|..+..+.........+.+ ++..++.|+.++
T Consensus 172 -----~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 172 -----DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp -----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred -----CcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 4677888888888755433322222222333 677788888765
No 130
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.41 E-value=0.25 Score=49.94 Aligned_cols=152 Identities=13% Similarity=0.118 Sum_probs=76.6
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-C-CEEEEEeecCCCCccceEEEEECCCCcEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-G-YNIYVIGGFDGNEYYNSCRCFNAVTKVWK 425 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 425 (712)
+.+++.++. ...+..+|+.+++.... ...+.....+.+++. + +.+|+.++. ...++.||+.+++..
T Consensus 11 ~~~~v~~~~-----~~~v~~~d~~~~~~~~~--~~~~~~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 11 HEYMIVTNY-----PNNLHVVDVASDTVYKS--CVMPDKFGPGTAMMAPDNRTAYVLNNH-----YGDIYGIDLDTCKNT 78 (349)
T ss_dssp CEEEEEEET-----TTEEEEEETTTTEEEEE--EECSSCCSSCEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEE
T ss_pred CEEEEEeCC-----CCeEEEEECCCCcEEEE--EecCCCCCCceeEECCCCCEEEEEeCC-----CCcEEEEeCCCCcEE
Confidence 456666653 35788999988876542 111110012344444 3 457777642 246999999988765
Q ss_pred EeCCCCC-----CcceeEEEE-ECC-eEEEEcccC---CC---CCCceeEEeecCCCceEE-cccCCccccceeEEE-EC
Q psy14726 426 EIAPMNF-----KRCYVSTAV-HHD-VIYAMGGYN---GQ---RRQNSVEKYNYTENQWSL-IAPMNVERSDASATT-LQ 490 (712)
Q Consensus 426 ~~~~~~~-----~r~~~~~~~-~~~-~iyv~GG~~---~~---~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~ 490 (712)
..-..+. ...-..++. -+| .+|+.+... .. .....+.+||+.+++-.. +...+.++.-.+++. -+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~d 158 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADD 158 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTT
T ss_pred EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCC
Confidence 3322221 111123333 245 455543210 00 012579999988743211 111122222222222 26
Q ss_pred CEEEEEcccCCCCccCceEEeeCCCCeeE
Q psy14726 491 GKIYITGGFNGHNCLNSCEVYDPECNQWT 519 (712)
Q Consensus 491 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 519 (712)
+++|+.++ ++.++|+.+.+-.
T Consensus 159 g~l~~~~~--------~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 159 GSLYVAGP--------DIYKMDVKTGKYT 179 (349)
T ss_dssp SCEEEESS--------SEEEECTTTCCEE
T ss_pred CcEEEccC--------cEEEEeCCCCcee
Confidence 67887542 3888888776643
No 131
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.39 E-value=1.6 Score=48.02 Aligned_cols=121 Identities=12% Similarity=0.122 Sum_probs=67.3
Q ss_pred CcCCCceEEEEeecCCCCCCceEEEEEC-CCC--cEEEcccCCCC-C--C---CcceEEEEECCEEEEEeecCCCCccce
Q psy14726 343 PRVPHEILFAIGGWSGGSPTDFVETYDT-RAD--RWVKIEQVDPM-G--P---RAYHGTAVIGYNIYVIGGFDGNEYYNS 413 (712)
Q Consensus 343 pr~~~~~i~~~GG~~~~~~~~~v~~~d~-~~~--~W~~~~~~~~~-~--~---r~~~~~~~~~~~lyv~GG~~~~~~~~~ 413 (712)
|-...+.||+.... ...++++|. .++ .|..-...... . . ....+.++.++.||+... ...
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~ 126 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------NGH 126 (571)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSE
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------CCE
Confidence 43445666665431 246899998 665 48762111100 0 0 112345566889988743 246
Q ss_pred EEEEECCCCc--EEEeCCCC-CC-cceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEc
Q psy14726 414 CRCFNAVTKV--WKEIAPMN-FK-RCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLI 474 (712)
Q Consensus 414 v~~yd~~~~~--W~~~~~~~-~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 474 (712)
++.+|..+++ |+.-..-+ .. ....+-++.+++||+..+..+......++.||+.+.+ |+.-
T Consensus 127 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 9999999885 86432211 10 1122334568899886542211223579999998764 8643
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.38 E-value=0.076 Score=53.68 Aligned_cols=232 Identities=7% Similarity=0.013 Sum_probs=116.9
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CC-EEEEEeecCCCCccceEEEEECCCCcE-
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GY-NIYVIGGFDGNEYYNSCRCFNAVTKVW- 424 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~v~~yd~~~~~W- 424 (712)
+.+++.++. ...+..+|+.+++....... + ....++++. ++ .+|+.+..+ ..++.+|+.+++.
T Consensus 10 ~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~--~--~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 10 NFGIVVEQH-----LRRISFFSTDTLEILNQITL--G--YDFVDTAITSDCSNVVVTSDFC-----QTLVQIETQLEPPK 75 (331)
T ss_dssp CEEEEEEGG-----GTEEEEEETTTCCEEEEEEC--C--CCEEEEEECSSSCEEEEEESTT-----CEEEEEECSSSSCE
T ss_pred CEEEEEecC-----CCeEEEEeCcccceeeeEEc--c--CCcceEEEcCCCCEEEEEeCCC-----CeEEEEECCCCcee
Confidence 456665542 24788999998887653221 1 112234433 44 577766522 3799999998874
Q ss_pred -EEeCCCCCCcceeEEEE-ECC-eEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CC-EEEEEccc
Q psy14726 425 -KEIAPMNFKRCYVSTAV-HHD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QG-KIYITGGF 499 (712)
Q Consensus 425 -~~~~~~~~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~ 499 (712)
..+..-..++ ++++. -++ .+| .+... .....+.+||+.+.+....- +.....+.++.- +| .+|+.+..
T Consensus 76 ~~~~~~~~~~~--~~~~~s~dg~~l~-~~~~~--~~~~~i~v~d~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 76 VVAIQEGQSSM--ADVDITPDDQFAV-TVTGL--NHPFNMQSYSFLKNKFISTI--PIPYDAVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp EEEEEECSSCC--CCEEECTTSSEEE-ECCCS--SSSCEEEEEETTTTEEEEEE--ECCTTEEEEEECTTSSCEEEEEET
T ss_pred EEecccCCCCc--cceEECCCCCEEE-EecCC--CCcccEEEEECCCCCeEEEE--ECCCCccceEECCCCCEEEEEecC
Confidence 2222222222 21233 334 566 33221 11237999999888754432 222222333333 44 48877653
Q ss_pred CCCCccCc-eEEeeCCCCe--eEE-eCCCCCCCcceEEEEE-CC-EEEEEcCCCCCCccceEEEEeCCCCcE-EEcCCCC
Q psy14726 500 NGHNCLNS-CEVYDPECNQ--WTL-IEPMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPVTKTW-SQVPDMY 572 (712)
Q Consensus 500 ~~~~~~~~-v~~yd~~~~~--W~~-~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p 572 (712)
+ .. +..|+...+. ... ...++....-..++.. ++ .+|+.+.. ...+.+||+.+.+. ..+..++
T Consensus 149 ~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-----~~~v~v~d~~~~~~~~~~~~~~ 218 (331)
T 3u4y_A 149 S-----ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLI-----GNSIGILETQNPENITLLNAVG 218 (331)
T ss_dssp T-----TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETT-----TTEEEEEECSSTTSCEEEEEEE
T ss_pred C-----CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCC-----CCeEEEEECCCCcccceeeecc
Confidence 3 24 6666654322 111 0111211122223322 44 58887643 25789999987764 1111112
Q ss_pred CCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 573 NPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 573 ~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
......+++.. +++ +|+..+. .+.+.+||+++++...+
T Consensus 219 ~~~~~~~~~~spdg~~l~v~~~~-----~~~i~~~d~~~~~~~~~ 258 (331)
T 3u4y_A 219 TNNLPGTIVVSRDGSTVYVLTES-----TVDVFNFNQLSGTLSFV 258 (331)
T ss_dssp CSSCCCCEEECTTSSEEEEECSS-----EEEEEEEETTTTEEEEE
T ss_pred CCCCCceEEECCCCCEEEEEEcC-----CCEEEEEECCCCceeee
Confidence 22222233333 444 6666442 23589999999887554
No 133
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.36 E-value=0.46 Score=53.34 Aligned_cols=241 Identities=9% Similarity=-0.001 Sum_probs=127.8
Q ss_pred ceEEEEECC--C-CcEEEcccCCCC-CCCcceEEEEE-CCEEEEEeecCC-----CCccceEEEEECCC------CcEEE
Q psy14726 363 DFVETYDTR--A-DRWVKIEQVDPM-GPRAYHGTAVI-GYNIYVIGGFDG-----NEYYNSCRCFNAVT------KVWKE 426 (712)
Q Consensus 363 ~~v~~~d~~--~-~~W~~~~~~~~~-~~r~~~~~~~~-~~~lyv~GG~~~-----~~~~~~v~~yd~~~------~~W~~ 426 (712)
..++.++.. . +....+...+.. ........+.. +++.++++..+. .....+++.+|..+ ++...
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 181 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE 181 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence 457778776 3 554543221100 11112233333 554444444321 12336799999988 67666
Q ss_pred eC-CCCCCcceeEEEEECCeEEEEcccCCCC---CCceeEEeecC-CCceEEcccCCcc-ccceeEEEE--CCEEEEEcc
Q psy14726 427 IA-PMNFKRCYVSTAVHHDVIYAMGGYNGQR---RQNSVEKYNYT-ENQWSLIAPMNVE-RSDASATTL--QGKIYITGG 498 (712)
Q Consensus 427 ~~-~~~~~r~~~~~~~~~~~iyv~GG~~~~~---~~~~v~~yd~~-~~~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG 498 (712)
+. .-+ .........-+|+..++....... ...+++++|.. +.++.....+... ......... +|++|+.+.
T Consensus 182 l~~~~~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~ 260 (662)
T 3azo_A 182 LSDDAH-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATD 260 (662)
T ss_dssp SSCSCS-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEEC
T ss_pred EEecCC-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEEC
Confidence 55 322 111112233466655554433211 23579999998 5633322222211 112222222 677887776
Q ss_pred cCCCCccCceEEeeCCCCeeEEeCCCCCCC----c---ceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCC
Q psy14726 499 FNGHNCLNSCEVYDPECNQWTLIEPMRHRR----S---GVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPD 570 (712)
Q Consensus 499 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r----~---~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 570 (712)
.++ ...++.+|+.+++|+.+.+..... . ....+.. ++++++.+.. ....++.+|..+.+...+..
T Consensus 261 ~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~d~~~~~~~~l~~ 333 (662)
T 3azo_A 261 RTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK----GAAVLGILDPESGELVDAAG 333 (662)
T ss_dssp TTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS----SSCEEEEEETTTTEEEECCS
T ss_pred CCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc----CccEEEEEECCCCcEEEecC
Confidence 543 247999999899998875432111 0 1122333 6777777653 24678888998888877743
Q ss_pred CCCCccceEE-EEECCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 571 MYNPRSNFAI-EVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 571 ~p~~r~~~~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
.. .....+ ..-++.+++..+... ....++.+|+.+++...+
T Consensus 334 ~~--~~~~~~~s~~~~~~~~~~~~~~--~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 334 PW--TEWAATLTVSGTRAVGVAASPR--TAYEVVELDTVTGRARTI 375 (662)
T ss_dssp SC--CEEEEEEEEETTEEEEEEEETT--EEEEEEEEETTTCCEEEE
T ss_pred CC--CeEEEEEecCCCEEEEEEcCCC--CCCEEEEEECCCCceEEe
Confidence 21 111223 334667776654332 234789999998888766
No 134
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.31 E-value=0.43 Score=52.85 Aligned_cols=121 Identities=14% Similarity=0.185 Sum_probs=72.3
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEEC-CCCc--EEEeCCCCC-----Ccc---eeEEEE--ECCe----EEEEcccC
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNA-VTKV--WKEIAPMNF-----KRC---YVSTAV--HHDV----IYAMGGYN 453 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~-~~~~--W~~~~~~~~-----~r~---~~~~~~--~~~~----iyv~GG~~ 453 (712)
+-++.++.||+.+.. ...++++|. .+++ |+.-...+. .++ ..+.++ .+++ ||+...
T Consensus 57 tP~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-- 129 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-- 129 (599)
T ss_dssp CCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT--
T ss_pred ccEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC--
Confidence 345569999998652 246899999 7775 876543321 111 223455 6777 888643
Q ss_pred CCCCCceeEEeecCCCc--eEEcccCCcc--ccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCe--eEEeC
Q psy14726 454 GQRRQNSVEKYNYTENQ--WSLIAPMNVE--RSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIE 522 (712)
Q Consensus 454 ~~~~~~~v~~yd~~~~~--W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~ 522 (712)
...++.+|..|.+ |+.-..-+.. ....+-++.+++||+-++.........+..||.+|++ |+.-.
T Consensus 130 ----dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 130 ----DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp ----TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ----CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 2468999988765 8753221111 1122335568988874432111123579999998876 87664
No 135
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.30 E-value=0.32 Score=50.59 Aligned_cols=224 Identities=11% Similarity=0.016 Sum_probs=110.8
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..++.|+.+ ..+..||........+.. ....-.+++.. ++..++.|+.+ ..+..||..+++...
T Consensus 120 ~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 120 GNSIVTGVEN-----GELRLWNKTGALLNVLNF----HRAPIVSVKWNKDGTHIISMDVE-----NVTILWNVISGTVMQ 185 (425)
T ss_dssp SSEEEEEETT-----SCEEEEETTSCEEEEECC----CCSCEEEEEECTTSSEEEEEETT-----CCEEEEETTTTEEEE
T ss_pred CCEEEEEeCC-----CeEEEEeCCCCeeeeccC----CCccEEEEEECCCCCEEEEEecC-----CeEEEEECCCCcEEE
Confidence 3455566532 357778854444333211 11222233333 55666677643 358889988877544
Q ss_pred eCCCCCCc--------------ceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccce-eEEEE-C
Q psy14726 427 IAPMNFKR--------------CYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDA-SATTL-Q 490 (712)
Q Consensus 427 ~~~~~~~r--------------~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~ 490 (712)
.-..+... .-.+++...+..+++|+.+ ..+..||..+.+-... +....... +++.. +
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~i~~~d~~~~~~~~~--~~~~~~~i~~~~~~~~ 258 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK-----GAIFVYQITEKTPTGK--LIGHHGPISVLEFNDT 258 (425)
T ss_dssp EECCC---------------CCCBSCCEEEETTEEEEECGG-----GCEEEEETTCSSCSEE--ECCCSSCEEEEEEETT
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC-----CeEEEEEcCCCceeee--eccCCCceEEEEECCC
Confidence 32222111 0222333334445666643 4688999887643211 11111111 22222 5
Q ss_pred CEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC
Q psy14726 491 GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP 569 (712)
Q Consensus 491 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 569 (712)
++.++.|+.++ .+..||..+.+....-.. ....-.+++.. ++ +++.|+.+ ..+..||..+.+-...-
T Consensus 259 ~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~~ 326 (425)
T 1r5m_A 259 NKLLLSASDDG-----TLRIWHGGNGNSQNCFYG-HSQSIVSASWVGDD-KVISCSMD-----GSVRLWSLKQNTLLALS 326 (425)
T ss_dssp TTEEEEEETTS-----CEEEECSSSBSCSEEECC-CSSCEEEEEEETTT-EEEEEETT-----SEEEEEETTTTEEEEEE
T ss_pred CCEEEEEcCCC-----EEEEEECCCCccceEecC-CCccEEEEEECCCC-EEEEEeCC-----CcEEEEECCCCcEeEec
Confidence 66777777553 578888776542221111 11122233333 45 66666643 57889998876533321
Q ss_pred CCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 570 DMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 570 ~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
.. .......+.+ ++.++++|+.++ .+.+||..+..
T Consensus 327 ~~--~~~~i~~~~~s~~~~~l~~~~~dg-----~i~i~~~~~~~ 363 (425)
T 1r5m_A 327 IV--DGVPIFAGRISQDGQKYAVAFMDG-----QVNVYDLKKLN 363 (425)
T ss_dssp EC--TTCCEEEEEECTTSSEEEEEETTS-----CEEEEECHHHH
T ss_pred cc--CCccEEEEEEcCCCCEEEEEECCC-----eEEEEECCCCc
Confidence 11 1112222223 577788887654 57788876544
No 136
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.30 E-value=0.017 Score=59.98 Aligned_cols=190 Identities=10% Similarity=0.091 Sum_probs=95.6
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeE-EEEE-CCeEEEEcccCCCCCCceeEEeecCCCc-eE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVS-TAVH-HDVIYAMGGYNGQRRQNSVEKYNYTENQ-WS 472 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~-~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~ 472 (712)
++.+++.|+.+ ..+..||..++.|..+..+........ ++.. +++.++.|+.+ ..+.+||..+.. |.
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTWK 91 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC------CCC
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCcee
Confidence 45566666643 357788888888887766654333333 3332 46777777754 458889988876 55
Q ss_pred EcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCe-eEEeCCCCC-CCcceEEEEE--CCEEEEEcCC
Q psy14726 473 LIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ-WTLIEPMRH-RRSGVSCIAY--HECIYVIGGF 546 (712)
Q Consensus 473 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~ 546 (712)
....+.........+.+ +++.++.|+.++ .+..||..+.+ |.....+.. .......+.+ ++.+++.|+.
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGAR-----VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEESSS-----CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEecCC-----eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 44333222222223333 567777777653 57788887765 333322222 1122222222 5667777775
Q ss_pred CCCCccceEEEEeCCCCc----------------EEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECC
Q psy14726 547 NGMSRMCNGEKYNPVTKT----------------WSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 547 ~~~~~~~~v~~yd~~~~~----------------W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
+ ..+..||..+.. -..+..+ ........+.+ ++++++.|+.++ .+.+||..
T Consensus 167 d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~-----~i~iwd~~ 235 (377)
T 3dwl_C 167 D-----RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDS-----SVTIAYPS 235 (377)
T ss_dssp S-----SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTT-----EEC-CEEC
T ss_pred C-----CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCC-----cEEEEECC
Confidence 4 457778875432 1122222 11111222333 677778887665 56777776
Q ss_pred CCe
Q psy14726 609 TDE 611 (712)
Q Consensus 609 ~~~ 611 (712)
+++
T Consensus 236 ~~~ 238 (377)
T 3dwl_C 236 APE 238 (377)
T ss_dssp STT
T ss_pred CCC
Confidence 654
No 137
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.30 E-value=0.99 Score=51.21 Aligned_cols=252 Identities=9% Similarity=-0.093 Sum_probs=131.0
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCC-----------CccceEEE
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGN-----------EYYNSCRC 416 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~-----------~~~~~v~~ 416 (712)
..++++....+.....++.+|..+++........ .. ..+.+.. +++-++++..... .....++.
T Consensus 137 ~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~---~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~ 212 (710)
T 2xdw_A 137 EYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER---VK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYY 212 (710)
T ss_dssp SEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE---EC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEE
T ss_pred CEEEEEEcCCCCceEEEEEEECCCCCCCcccccC---cc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEE
Confidence 3444443333333447889999998876532111 11 1223333 5554445444322 22456999
Q ss_pred EECCCCcEE--EeCCCC-CCcceeEEE-EECCeEEEEcccCCCCCCceeEEeecCC------C--ceEEcccCCccccce
Q psy14726 417 FNAVTKVWK--EIAPMN-FKRCYVSTA-VHHDVIYAMGGYNGQRRQNSVEKYNYTE------N--QWSLIAPMNVERSDA 484 (712)
Q Consensus 417 yd~~~~~W~--~~~~~~-~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~------~--~W~~~~~~p~~r~~~ 484 (712)
++..+++.. .+...+ .+....+.. .-+|+..+++...+....+.++.+|..+ . .+..+..-..... .
T Consensus 213 ~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~ 291 (710)
T 2xdw_A 213 HVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-D 291 (710)
T ss_dssp EETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-E
T ss_pred EECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE-E
Confidence 999887632 221221 223233333 3455544444332222257899999876 4 5777754322221 1
Q ss_pred eEEEECCEEEEEcccCCCCccCceEEeeCCCC---eeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeC
Q psy14726 485 SATTLQGKIYITGGFNGHNCLNSCEVYDPECN---QWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNP 560 (712)
Q Consensus 485 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~ 560 (712)
....-++.||+.+..+. ....++.+|..+. .|+.+.+-.....-..+... ++.+++....++ ...++.+|+
T Consensus 292 ~~s~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g---~~~l~~~~~ 366 (710)
T 2xdw_A 292 YVTNEGTVFTFKTNRHS--PNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV---KNTLQLHDL 366 (710)
T ss_dssp EEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT---EEEEEEEET
T ss_pred EEeccCCEEEEEECCCC--CCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC---EEEEEEEEC
Confidence 22233678888875432 2457899998876 48877543221222334445 778887765432 356899998
Q ss_pred CCCc-EEEcCCCCCCccceEEEEE--CC-EEEEEcccCCCceeeeEEEEECCCCe--EEEc
Q psy14726 561 VTKT-WSQVPDMYNPRSNFAIEVI--DD-MIFAIGGFNGVTTIYHVECYDEKTDE--WYEA 615 (712)
Q Consensus 561 ~~~~-W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~~--W~~~ 615 (712)
.+++ ...+.. + ......+.. ++ .+++... +. ..-..++.||+.+++ ++.+
T Consensus 367 ~~g~~~~~l~~-~--~~~v~~~~~s~d~~~l~~~~s-s~-~~P~~i~~~d~~tg~~~~~~l 422 (710)
T 2xdw_A 367 ATGALLKIFPL-E--VGSVVGYSGQKKDTEIFYQFT-SF-LSPGIIYHCDLTKEELEPRVF 422 (710)
T ss_dssp TTCCEEEEECC-C--SSEEEEEECCTTCSEEEEEEE-CS-SCCCEEEEEETTSSSCCCEEE
T ss_pred CCCCEEEecCC-C--CceEEEEecCCCCCEEEEEEe-CC-CCCCEEEEEECCCCccceEEe
Confidence 6554 445432 2 111122222 33 4444322 21 112468999998877 6554
No 138
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.28 E-value=0.062 Score=61.84 Aligned_cols=188 Identities=14% Similarity=0.095 Sum_probs=107.0
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE--C--CeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--H--DVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
++..++.||.+ ..+..||..++++..+..+.........+.+ + +..++.||.+ ..+.+||..+++|
T Consensus 20 dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-----g~I~vwd~~~~~~ 89 (753)
T 3jro_A 20 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRW 89 (753)
T ss_dssp SSCCEEEEETT-----TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCeEEEEECC-----CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-----CeEEEEECCCCcc
Confidence 45566677654 3588888887777766555433333333333 3 6777778754 4589999999988
Q ss_pred EEcccCCccccceeEEEE--C--CEEEEEcccCCCCccCceEEeeCCCCeeE---EeCCCCCCCcceEEEEE--------
Q psy14726 472 SLIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPECNQWT---LIEPMRHRRSGVSCIAY-------- 536 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~W~---~~~~~p~~r~~~~~~~~-------- 536 (712)
..+..+........++.+ + +.+++.||.++ .+..||..+..-. .....+. .-.++...
T Consensus 90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~~~~~~~~~~~~~~--~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKENGTTSPIIIDAHAI--GVNSASWAPATIEEDG 162 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSSSCCCCEEEECCSS--CEEEEEECCCC-----
T ss_pred cccccccCCCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecCCCcceeEeecCCC--ceEEEEecCccccccc
Confidence 777555433333344444 3 67888887664 5778887765211 1111111 11112211
Q ss_pred ------CCEEEEEcCCCCCCccceEEEEeCCCC--cEEEcCCCCCCccceEEEEE--C---CEEEEEcccCCCceeeeEE
Q psy14726 537 ------HECIYVIGGFNGMSRMCNGEKYNPVTK--TWSQVPDMYNPRSNFAIEVI--D---DMIFAIGGFNGVTTIYHVE 603 (712)
Q Consensus 537 ------~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~i~v~GG~~~~~~~~~v~ 603 (712)
++.+++.|+.+ ..+..||..+. .+..+..+.........+.+ + +.+++.||.++ .+.
T Consensus 163 ~~~~~~d~~~l~sgs~d-----g~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg-----~I~ 232 (753)
T 3jro_A 163 EHNGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDR-----TCI 232 (753)
T ss_dssp ----CGGGCCEEEEETT-----SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSS-----CEE
T ss_pred ccccCCCCCEEEEEECC-----CeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCC-----EEE
Confidence 35667777654 35677776543 44444333222222233333 4 78899998765 467
Q ss_pred EEECCCC
Q psy14726 604 CYDEKTD 610 (712)
Q Consensus 604 ~yd~~~~ 610 (712)
+||+.++
T Consensus 233 iwd~~~~ 239 (753)
T 3jro_A 233 IWTQDNE 239 (753)
T ss_dssp EEEESSS
T ss_pred EecCCCC
Confidence 7887764
No 139
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.26 E-value=0.73 Score=46.07 Aligned_cols=219 Identities=8% Similarity=-0.075 Sum_probs=116.4
Q ss_pred ceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-CCeEEEEcccCCCCCCceeEEeec
Q psy14726 389 YHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-HDVIYAMGGYNGQRRQNSVEKYNY 466 (712)
Q Consensus 389 ~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~ 466 (712)
..+.++. ++.||+.--. ...++++|+.... ......+ ..-++++.. +|++|+...... ...++++|+
T Consensus 34 pegia~~~~g~lyv~d~~-----~~~I~~~d~~g~~-~~~~~~~--~~p~gia~~~dG~l~vad~~~~---~~~v~~~d~ 102 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHE-----VGEIVSITPDGNQ-QIHATVE--GKVSGLAFTSNGDLVATGWNAD---SIPVVSLVK 102 (306)
T ss_dssp EEEEEECTTSCEEEEETT-----TTEEEEECTTCCE-EEEEECS--SEEEEEEECTTSCEEEEEECTT---SCEEEEEEC
T ss_pred cceEEECCCCCEEEEeCC-----CCeEEEECCCCce-EEEEeCC--CCceeEEEcCCCcEEEEeccCC---cceEEEEcC
Confidence 3445543 5678877531 2468999987643 2222222 233444443 678988753211 135888999
Q ss_pred CCCceEEcccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEeeCCCCe---eEEeCC----CCC-C-CcceEEEEE
Q psy14726 467 TENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQ---WTLIEP----MRH-R-RSGVSCIAY 536 (712)
Q Consensus 467 ~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~----~p~-~-r~~~~~~~~ 536 (712)
.+.+.+.+...+..+...+.+.. ++.+|+.-.. ...++++|+.+.+ |..-+. .+. . ....++..-
T Consensus 103 ~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~-----~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~d 177 (306)
T 2p4o_A 103 SDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY-----RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF 177 (306)
T ss_dssp TTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT-----TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE
T ss_pred CCCeEEEEEeCCCccccCcccccCCCcEEEEECC-----CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcC
Confidence 88888877666655554444433 5667876421 2479999988653 211111 111 1 122233333
Q ss_pred CCEEEEEcCCCCCCccceEEEEeCCC-CcE---EEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 537 HECIYVIGGFNGMSRMCNGEKYNPVT-KTW---SQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 537 ~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W---~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
++.||+.--. ...+++||+.. .+. ..+.....| .++++- +|.+|+.-..+ +.|.+||+. ++
T Consensus 178 g~~lyv~d~~-----~~~I~~~~~~~~g~~~~~~~~~~~~~P---~gi~vd~dG~l~va~~~~-----~~V~~~~~~-G~ 243 (306)
T 2p4o_A 178 GNFLYVSNTE-----KMLLLRIPVDSTDKPGEPEIFVEQTNI---DDFAFDVEGNLYGATHIY-----NSVVRIAPD-RS 243 (306)
T ss_dssp TTEEEEEETT-----TTEEEEEEBCTTSCBCCCEEEEESCCC---SSEEEBTTCCEEEECBTT-----CCEEEECTT-CC
T ss_pred CCEEEEEeCC-----CCEEEEEEeCCCCCCCccEEEeccCCC---CCeEECCCCCEEEEeCCC-----CeEEEECCC-CC
Confidence 5689987532 36899999864 221 111111111 223333 67888874322 368999987 55
Q ss_pred EEEccCCCCcccceEEEEEc------CcceeE
Q psy14726 612 WYEATDMNIYRSALSACVIM------GLPNVY 637 (712)
Q Consensus 612 W~~~~~~p~~r~~~~~~~~~------~~~~v~ 637 (712)
...+...+.+-....++.+. +.+|+.
T Consensus 244 ~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt 275 (306)
T 2p4o_A 244 TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVV 275 (306)
T ss_dssp EEEEECGGGTCTTEEEEEECCSTTTTTEEEEE
T ss_pred EEEEeecccccCCceEEEEecccCCCCEEEEE
Confidence 44433333332334555553 456665
No 140
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.26 E-value=0.19 Score=49.62 Aligned_cols=209 Identities=11% Similarity=-0.007 Sum_probs=111.1
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCC-ceEE
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTEN-QWSL 473 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~ 473 (712)
+++++.|.. ...+..+|+.+++ |+.-..-. .......+..+|++++.+. +.+..||+..+ .|+.
T Consensus 5 ~~~lv~~~~-----~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~~-------~~V~~~d~~G~~~W~~ 71 (276)
T 3no2_A 5 QHLLVGGSG-----WNKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSYS-------KGAKMITRDGRELWNI 71 (276)
T ss_dssp CEEEEECTT-----CSEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEECB-------SEEEEECTTSCEEEEE
T ss_pred CcEEEeeCC-----CCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeCC-------CCEEEECCCCCEEEEE
Confidence 567777653 2568899998876 65432211 1233334445788888432 46999999322 3765
Q ss_pred cccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEeeCCCCe-eEEeC--CCCC--CCcceEEEEECCEEEEEcCCC
Q psy14726 474 IAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPECNQ-WTLIE--PMRH--RRSGVSCIAYHECIYVIGGFN 547 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~--~~p~--~r~~~~~~~~~~~iyv~GG~~ 547 (712)
-.+ .....+++... +|++++..+.. ...+..+|++... |+... ..+. ..........++.+++....
T Consensus 72 ~~~--~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~- 144 (276)
T 3no2_A 72 AAP--AGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA- 144 (276)
T ss_dssp ECC--TTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT-
T ss_pred cCC--CCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC-
Confidence 432 11122333333 67777765431 2467888885442 54331 1111 11112233346666665532
Q ss_pred CCCccceEEEEeCCCC-cEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCC--eEEEcc-CCCCcc
Q psy14726 548 GMSRMCNGEKYNPVTK-TWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTD--EWYEAT-DMNIYR 622 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~--~W~~~~-~~p~~r 622 (712)
...+.+||++-+ .|+.-... ..+++... ++.+++.+..+ ..+..+|++++ .|+.-. .++..+
T Consensus 145 ----~~~v~~~d~~G~~~w~~~~~~----~~~~~~~~~~g~~~v~~~~~-----~~v~~~d~~tG~~~w~~~~~~~~~~~ 211 (276)
T 3no2_A 145 ----TSEVREIAPNGQLLNSVKLSG----TPFSSAFLDNGDCLVACGDA-----HCFVQLNLESNRIVRRVNANDIEGVQ 211 (276)
T ss_dssp ----TTEEEEECTTSCEEEEEECSS----CCCEEEECTTSCEEEECBTT-----SEEEEECTTTCCEEEEEEGGGSBSCC
T ss_pred ----CCEEEEECCCCCEEEEEECCC----CccceeEcCCCCEEEEeCCC-----CeEEEEeCcCCcEEEEecCCCCCCcc
Confidence 357899998732 46654321 12334444 77888877653 25899999965 466542 233222
Q ss_pred c--ceEEEE-EcCcceeEe
Q psy14726 623 S--ALSACV-IMGLPNVYD 638 (712)
Q Consensus 623 ~--~~~~~~-~~~~~~v~~ 638 (712)
. -.++++ -++.+|+..
T Consensus 212 l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 212 LFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp CSEEEEEEECTTSCEEEEE
T ss_pred ccccccceEcCCCCEEEEe
Confidence 2 122333 356677764
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.25 E-value=0.46 Score=53.78 Aligned_cols=191 Identities=7% Similarity=-0.054 Sum_probs=104.5
Q ss_pred cceEEEEECCCCcEEEeCCCCCCcce-eEEE-EECCeEEEEcccCCCCCCceeEEeecCCC-ceEEcccCCcccc----c
Q psy14726 411 YNSCRCFNAVTKVWKEIAPMNFKRCY-VSTA-VHHDVIYAMGGYNGQRRQNSVEKYNYTEN-QWSLIAPMNVERS----D 483 (712)
Q Consensus 411 ~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~----~ 483 (712)
...++.+|..+++-..+......... ..++ .-+|+..++++.+.......++.+|+.+. .+..+........ .
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 35789999999886665432211122 2222 23666555555443334568999999988 6665532111110 1
Q ss_pred eeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--C-CEEEEEcCCCCCCccceEEEE
Q psy14726 484 ASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--H-ECIYVIGGFNGMSRMCNGEKY 558 (712)
Q Consensus 484 ~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~v~~y 558 (712)
..+..- +|++++.+..++ ...++.+|........+..-.... ...... + +.||+.+..++ .....++.+
T Consensus 314 ~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~~~~~~v--~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~ 387 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVTKGEWEV--TNFAGFDPKGTRLYFESTEAS-PLERHFYCI 387 (706)
T ss_dssp CCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECCCSSSCE--EEEEEECTTSSEEEEEESSSC-TTCBEEEEE
T ss_pred CceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecCCCCeEE--EeeeEEcCCCCEEEEEecCCC-CceEEEEEE
Confidence 122223 778666665443 356888887777777664322111 121222 3 45766665422 123578999
Q ss_pred eCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 559 NPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 559 d~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
|..+.+...+.. ....++++.. +++.+++...+.. ....++++|..+++
T Consensus 388 d~~~~~~~~l~~---~~~~~~~~~spdg~~l~~~~~~~~-~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 388 DIKGGKTKDLTP---ESGMHRTQLSPDGSAIIDIFQSPT-VPRKVTVTNIGKGS 437 (706)
T ss_dssp ETTCCCCEESCC---SSSEEEEEECTTSSEEEEEEECSS-CSCEEEEEESSSCE
T ss_pred EcCCCCceeccC---CCceEEEEECCCCCEEEEEecCCC-CCcEEEEEECCCCe
Confidence 998887776652 1122333332 5665555543321 22468899988876
No 142
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.25 E-value=0.32 Score=50.30 Aligned_cols=231 Identities=9% Similarity=0.085 Sum_probs=117.3
Q ss_pred EEEEeecCCCCCCceEEEEECCCCc-------EEEcccCCCCCCCcceEEEEE-C----C---EEEEEeecCCCCccceE
Q psy14726 350 LFAIGGWSGGSPTDFVETYDTRADR-------WVKIEQVDPMGPRAYHGTAVI-G----Y---NIYVIGGFDGNEYYNSC 414 (712)
Q Consensus 350 i~~~GG~~~~~~~~~v~~~d~~~~~-------W~~~~~~~~~~~r~~~~~~~~-~----~---~lyv~GG~~~~~~~~~v 414 (712)
.++.|+.+ ..+..||..+.+ ...+.. ....-.+++.. + + .+++.|+.+ ..+
T Consensus 28 ~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d-----g~i 93 (397)
T 1sq9_A 28 FTVSCSGD-----GYLKVWDNKLLDNENPKDKSYSHFV----HKSGLHHVDVLQAIERDAFELCLVATTSFS-----GDL 93 (397)
T ss_dssp EEEEEETT-----SEEEEEESBCCTTCCGGGGEEEEEC----CTTCEEEEEEEEEEETTTEEEEEEEEEETT-----SCE
T ss_pred eEEEEcCC-----CEEEEEECCCcccccCCCcceEEec----CCCcEEEEEEecccccCCccccEEEEEcCC-----CCE
Confidence 45556532 367888887765 333211 11122333333 4 6 788888754 358
Q ss_pred EEEECCCCc------EEEeCCCCCC---cceeEEEEE-----CCeE-EEEcccCCCCCCceeEEeecCC------Cc---
Q psy14726 415 RCFNAVTKV------WKEIAPMNFK---RCYVSTAVH-----HDVI-YAMGGYNGQRRQNSVEKYNYTE------NQ--- 470 (712)
Q Consensus 415 ~~yd~~~~~------W~~~~~~~~~---r~~~~~~~~-----~~~i-yv~GG~~~~~~~~~v~~yd~~~------~~--- 470 (712)
..||..+++ +..+...+.. ..-.+++.. ++.. ++.|+.+ ..+..||..+ .+
T Consensus 94 ~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~ 168 (397)
T 1sq9_A 94 LFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTYIWKFHPFADESNSLTLN 168 (397)
T ss_dssp EEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEEEEEEESSSSHHHHTTTC
T ss_pred EEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEEEEeCCccccccccceee
Confidence 888888777 7666544311 222233333 4666 7777754 4577787766 22
Q ss_pred eEEcccC-------CccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCC--C--CCcceEEEEE-
Q psy14726 471 WSLIAPM-------NVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMR--H--RRSGVSCIAY- 536 (712)
Q Consensus 471 W~~~~~~-------p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p--~--~r~~~~~~~~- 536 (712)
|.....+ ........++.+ ++ +++.|+.+ ..+..||..+.+....-... . .......+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~ 242 (397)
T 1sq9_A 169 WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN-----GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 242 (397)
T ss_dssp CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT-----SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred ccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC-----CcEEEEECCCCceeEEEeccccccccCCccceEEEC
Confidence 2111111 001111222233 56 77777655 36889998877643322210 1 0122222233
Q ss_pred -CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCC-----------CccceEEEEE--CCEEEEEcccCCCceeeeE
Q psy14726 537 -HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYN-----------PRSNFAIEVI--DDMIFAIGGFNGVTTIYHV 602 (712)
Q Consensus 537 -~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-----------~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v 602 (712)
++.+++.|+.++ ....+..||..+.+-...-..+. .......+.+ ++..++.|+.++ .+
T Consensus 243 ~~~~~l~~~~~d~--~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i 315 (397)
T 1sq9_A 243 PQGSLLAIAHDSN--SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG-----KL 315 (397)
T ss_dssp SSTTEEEEEEEET--TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS-----EE
T ss_pred CCCCEEEEEecCC--CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC-----eE
Confidence 566667776421 11478899987764322211100 1122222333 577778887654 68
Q ss_pred EEEECCCCeE
Q psy14726 603 ECYDEKTDEW 612 (712)
Q Consensus 603 ~~yd~~~~~W 612 (712)
.+||..+.+-
T Consensus 316 ~iwd~~~~~~ 325 (397)
T 1sq9_A 316 RFWDVKTKER 325 (397)
T ss_dssp EEEETTTTEE
T ss_pred EEEEcCCCce
Confidence 8999887654
No 143
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.25 E-value=1.3 Score=45.69 Aligned_cols=188 Identities=10% Similarity=-0.040 Sum_probs=94.1
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++.+++.|+.+ ..+..||........+..-. ..-.+++. .++..++.|+.+ ..+..||..+.+....
T Consensus 119 ~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 119 DGNSIVTGVEN-----GELRLWNKTGALLNVLNFHR--APIVSVKWNKDGTHIISMDVE-----NVTILWNVISGTVMQH 186 (425)
T ss_dssp TSSEEEEEETT-----SCEEEEETTSCEEEEECCCC--SCEEEEEECTTSSEEEEEETT-----CCEEEEETTTTEEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeeccCCC--ccEEEEEECCCCCEEEEEecC-----CeEEEEECCCCcEEEE
Confidence 66777777754 35788885444444443211 11222333 256666666643 4588888877765433
Q ss_pred ccCCccc--------------cceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCE
Q psy14726 475 APMNVER--------------SDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HEC 539 (712)
Q Consensus 475 ~~~p~~r--------------~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~ 539 (712)
-..+... .-.+++...+..+++|+.+ ..+..||..+.+-...-... ...-.+++.. ++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~i~~~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~ 260 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK-----GAIFVYQITEKTPTGKLIGH-HGPISVLEFNDTNK 260 (425)
T ss_dssp ECCC---------------CCCBSCCEEEETTEEEEECGG-----GCEEEEETTCSSCSEEECCC-SSCEEEEEEETTTT
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC-----CeEEEEEcCCCceeeeeccC-CCceEEEEECCCCC
Confidence 2222111 0222333333345666654 45888998876422111111 1111222222 566
Q ss_pred EEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 540 IYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 540 iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
.++.|+.+ ..+..||..+.+....-.. ....-.+++.. ++ .++.|+.++ .+.+||+.+.+-.
T Consensus 261 ~l~~~~~d-----~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~-~l~~~~~d~-----~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 261 LLLSASDD-----GTLRIWHGGNGNSQNCFYG-HSQSIVSASWVGDD-KVISCSMDG-----SVRLWSLKQNTLL 323 (425)
T ss_dssp EEEEEETT-----SCEEEECSSSBSCSEEECC-CSSCEEEEEEETTT-EEEEEETTS-----EEEEEETTTTEEE
T ss_pred EEEEEcCC-----CEEEEEECCCCccceEecC-CCccEEEEEECCCC-EEEEEeCCC-----cEEEEECCCCcEe
Confidence 66677643 4678888776432211110 11122333333 55 777777654 6788998876543
No 144
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.24 E-value=0.13 Score=53.19 Aligned_cols=183 Identities=4% Similarity=-0.020 Sum_probs=100.7
Q ss_pred EEEEEeecCCCCccceEEEEECCCCcEEEeCCCC-CCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 398 NIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN-FKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 398 ~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
.+++.|+.+ ..+..||..+.+........ ....-.+++.. ++.+++.|+.+ ..+..||..+.....+
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~ 156 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-----GATTLRDFSGSVIQVF 156 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-----TEEEEEETTSCEEEEE
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-----CEEEEEECCCCceEEE
Confidence 566777754 35889999988876554432 22222334443 34677777643 4688899887766555
Q ss_pred ccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCE-EEEEcCCCCC
Q psy14726 475 APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HEC-IYVIGGFNGM 549 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~ 549 (712)
...........++.+ +++.++.|+.+ ..+..||.....-..+... ......+.+ ++. +++.|+.+
T Consensus 157 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~h---~~~v~~~~~~~~~~~~l~s~~~d-- 226 (383)
T 3ei3_B 157 AKTDSWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKLH---KAKVTHAEFNPRCDWLMATSSVD-- 226 (383)
T ss_dssp ECCCCSSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEECS---SSCEEEEEECSSCTTEEEEEETT--
T ss_pred eccCCCCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEeccC---CCcEEEEEECCCCCCEEEEEeCC--
Confidence 433221122222222 56777777765 4688888855443333221 122222222 344 77777754
Q ss_pred CccceEEEEeCCC----CcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 550 SRMCNGEKYNPVT----KTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 550 ~~~~~v~~yd~~~----~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
..+..||..+ ........ ....-.+++.. ++..++.|+.++ .+.+||..+.
T Consensus 227 ---~~i~iwd~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~l~~~~~d~-----~i~iwd~~~~ 283 (383)
T 3ei3_B 227 ---ATVKLWDLRNIKDKNSYIAEMP--HEKPVNAAYFNPTDSTKLLTTDQRN-----EIRVYSSYDW 283 (383)
T ss_dssp ---SEEEEEEGGGCCSTTCEEEEEE--CSSCEEEEEECTTTSCEEEEEESSS-----EEEEEETTBT
T ss_pred ---CEEEEEeCCCCCcccceEEEec--CCCceEEEEEcCCCCCEEEEEcCCC-----cEEEEECCCC
Confidence 4688888876 33322211 11111222222 567778887654 6788887764
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.22 E-value=0.37 Score=54.65 Aligned_cols=238 Identities=8% Similarity=-0.066 Sum_probs=125.5
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCC-----CcEEEeCCCCCCc--
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVT-----KVWKEIAPMNFKR-- 434 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~-----~~W~~~~~~~~~r-- 434 (712)
..++.+|..+++-..+..... .. ..++.. +++.+++.. ...++.+|..+ ++...+.......
T Consensus 101 ~~i~~~d~~~~~~~~l~~~~~---~~-~~~~~SpdG~~la~~~------~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~ 170 (706)
T 2z3z_A 101 GGLVGFDMLARKVTYLFDTNE---ET-ASLDFSPVGDRVAYVR------NHNLYIARGGKLGEGMSRAIAVTIDGTETLV 170 (706)
T ss_dssp TEEEEEETTTTEEEEEECCTT---CC-TTCEECTTSSEEEEEE------TTEEEEEECBCTTSCCCCCEESCSCCBTTEE
T ss_pred CEEEEEECCCCceEEccCCcc---cc-cCCcCCCCCCEEEEEE------CCeEEEEecCcccccCCCcEEeccCCCCCeE
Confidence 578899998887665432211 11 112222 443333432 14688999888 7766654433221
Q ss_pred ------------ceeEEEEECCeEEEEcccCC----------------------------CCCCceeEEeecCCCceEEc
Q psy14726 435 ------------CYVSTAVHHDVIYAMGGYNG----------------------------QRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 435 ------------~~~~~~~~~~~iyv~GG~~~----------------------------~~~~~~v~~yd~~~~~W~~~ 474 (712)
.......-+|+.++++..+. ......++++|..+.+-..+
T Consensus 171 ~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~ 250 (706)
T 2z3z_A 171 YGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYL 250 (706)
T ss_dssp ESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEEC
T ss_pred cccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEee
Confidence 12222334666656554321 11235799999988876555
Q ss_pred ccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCC-eeEEeCCCCCCC----cceEEEEE--CCEEEEEcC
Q psy14726 475 APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECN-QWTLIEPMRHRR----SGVSCIAY--HECIYVIGG 545 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r----~~~~~~~~--~~~iyv~GG 545 (712)
............+.+ +|+..++++.+.......+..+|..++ .+..+....... .......- ++++++.+.
T Consensus 251 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~ 330 (706)
T 2z3z_A 251 QTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSR 330 (706)
T ss_dssp CCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEEC
T ss_pred ccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEc
Confidence 332111122223333 666444544443334568999999998 776553211111 11122333 677666664
Q ss_pred CCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--C-CEEEEEcccCCCceeeeEEEEECCCCeEEEcc
Q psy14726 546 FNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--D-DMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 546 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 616 (712)
.++ ...++.+|........+..-.... .....+ + +.|++.+..++ .....++.+|..++....+.
T Consensus 331 ~~g---~~~l~~~~~~~~~~~~l~~~~~~v--~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 331 RDG---WNHLYLYDTTGRLIRQVTKGEWEV--TNFAGFDPKGTRLYFESTEAS-PLERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp TTS---SCEEEEEETTSCEEEECCCSSSCE--EEEEEECTTSSEEEEEESSSC-TTCBEEEEEETTCCCCEESC
T ss_pred cCC---ccEEEEEECCCCEEEecCCCCeEE--EeeeEEcCCCCEEEEEecCCC-CceEEEEEEEcCCCCceecc
Confidence 432 467888997777777774322211 121233 3 45666554432 22247899999888766654
No 146
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.21 E-value=0.62 Score=49.43 Aligned_cols=238 Identities=5% Similarity=-0.068 Sum_probs=117.7
Q ss_pred eEEEEeecCCCCCCceEEEEECC--CCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEE
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTR--ADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWK 425 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~--~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 425 (712)
.+++.|+.+ ..+..||.. ++.....-.. ...+..-.+++.. ++..+++|+.+ ..++.+|..+....
T Consensus 116 ~l~~~~~~d-----g~v~iwd~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~~-----g~v~~~~~~~~~~~ 184 (450)
T 2vdu_B 116 RLIACADSD-----KSLLVFDVDKTSKNVLKLRKR-FCFSKRPNAISIAEDDTTVIIADKF-----GDVYSIDINSIPEE 184 (450)
T ss_dssp EEEEEEGGG-----TEEEEEEECSSSSSCEEEEEE-EECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTSCCCS
T ss_pred EEEEEECCC-----CeEEEEECcCCCCceeeeeec-ccCCCCceEEEEcCCCCEEEEEeCC-----CcEEEEecCCcccc
Confidence 445666642 357778876 4443321000 0011111233333 56666777642 45788887765532
Q ss_pred E--eCCCCCCc-ceeEE-EEEC---CeEEEEcccCCCCCCceeEEeecCCCceEEc-ccCCccccceeEEEECCEEEEEc
Q psy14726 426 E--IAPMNFKR-CYVST-AVHH---DVIYAMGGYNGQRRQNSVEKYNYTENQWSLI-APMNVERSDASATTLQGKIYITG 497 (712)
Q Consensus 426 ~--~~~~~~~r-~~~~~-~~~~---~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~G 497 (712)
. ...+.... .-.++ ..-+ +++++.|+.+ ..+.+||..+.+.... ..-........+.. ++++++.|
T Consensus 185 ~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~ 258 (450)
T 2vdu_B 185 KFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----EHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSA 258 (450)
T ss_dssp SCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----SCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEE
T ss_pred cccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----CcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEE
Confidence 1 11111111 11222 2345 7788888754 4688899877654322 11111111122222 77778888
Q ss_pred ccCCCCccCceEEeeCCCCeeEEeCCC------------------------CCCCcceEEEEE--CCEEEEEcCCCCCCc
Q psy14726 498 GFNGHNCLNSCEVYDPECNQWTLIEPM------------------------RHRRSGVSCIAY--HECIYVIGGFNGMSR 551 (712)
Q Consensus 498 G~~~~~~~~~v~~yd~~~~~W~~~~~~------------------------p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 551 (712)
|.+ ..+..||..+++....-.. +....-..++.. +..|++.++.
T Consensus 259 ~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~----- 328 (450)
T 2vdu_B 259 GGD-----DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA----- 328 (450)
T ss_dssp ESS-----SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT-----
T ss_pred eCC-----CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC-----
Confidence 755 4688899888764322111 001111122222 3345554423
Q ss_pred cceEEEEeC--C-CCcEEEcCCCCCCccceEEEEECCEEEEEcccCCC----ceeeeEEEEECCCCeEE
Q psy14726 552 MCNGEKYNP--V-TKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGV----TTIYHVECYDEKTDEWY 613 (712)
Q Consensus 552 ~~~v~~yd~--~-~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~----~~~~~v~~yd~~~~~W~ 613 (712)
...+..||. . ..++..+..++....-.+++...+.+++..+.... ...-.++.++.+++.|.
T Consensus 329 d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 329 TKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp CSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred CCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 256778887 3 34566554443333334455556777776554321 12236777888888885
No 147
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.21 E-value=0.27 Score=48.99 Aligned_cols=221 Identities=9% Similarity=-0.049 Sum_probs=113.5
Q ss_pred ceEEEEECCCCcEEEcccCCCC-CCCcceEEEEE-C-CEEEEEeecCCCCccceEEEEECCCCcEEEe-CCCCCC---cc
Q psy14726 363 DFVETYDTRADRWVKIEQVDPM-GPRAYHGTAVI-G-YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI-APMNFK---RC 435 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~-~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~~~~---r~ 435 (712)
..+..||+.++++..+...... ....-+++++. + +.+|+.+.. +.+++||+. ++...+ ...... ..
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~~-g~~~~~~~~~~~~~~~~~ 118 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTD-GTFEEIAKKDSEGRRMQG 118 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETT-SCEEECCSBCTTSCBCBC
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeCC-CCEEEEEeccCCCccccC
Confidence 4688999888888764321000 01122344443 5 788887641 368999998 777665 332211 11
Q ss_pred eeEEEE-ECCeEEEEcccC----------CCCCCceeEEeecCCCceEEccc-CCccccceeEEEE-----CC-EEEEEc
Q psy14726 436 YVSTAV-HHDVIYAMGGYN----------GQRRQNSVEKYNYTENQWSLIAP-MNVERSDASATTL-----QG-KIYITG 497 (712)
Q Consensus 436 ~~~~~~-~~~~iyv~GG~~----------~~~~~~~v~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-----~~-~iyv~G 497 (712)
-..++. -+|++|+..... .......+++||+. .+...+.. ...+ .+.+.. ++ .+|+..
T Consensus 119 ~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~---~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP---NGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE---EEEEEEECTTSCEEEEEEEE
T ss_pred CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc---ceEEEecccCCCCCEEEEEE
Confidence 223333 367888865322 11123579999987 55544321 1111 233333 34 577765
Q ss_pred ccCCCCccCceEEeeCC-CCeeEE---eCCCCCC--CcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCC
Q psy14726 498 GFNGHNCLNSCEVYDPE-CNQWTL---IEPMRHR--RSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPD 570 (712)
Q Consensus 498 G~~~~~~~~~v~~yd~~-~~~W~~---~~~~p~~--r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 570 (712)
..+ ..+.+||+. ++++.. ...++.. ..-.+++.. ++.||+.... ...+.+||+.+.+....-.
T Consensus 195 ~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~-----~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 195 TPT-----KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-----SSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp TTT-----TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-----TTEEEEECTTCBSCSEEEE
T ss_pred CCC-----CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC-----CCEEEEEcCCCCcEeEEEe
Confidence 322 468888875 444322 1222222 111223322 5788887532 2578999998543211111
Q ss_pred CCCCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEECCCC
Q psy14726 571 MYNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 571 ~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
.+. ..-.+++.- ++. ||+.+..+ ..+++|++...
T Consensus 265 ~~~-~~~~~i~~~~dg~~l~v~~~~~-----~~l~~~~~~~~ 300 (314)
T 1pjx_A 265 CPF-EKPSNLHFKPQTKTIFVTEHEN-----NAVWKFEWQRN 300 (314)
T ss_dssp CSS-SCEEEEEECTTSSEEEEEETTT-----TEEEEEECSSC
T ss_pred CCC-CCceeEEECCCCCEEEEEeCCC-----CeEEEEeCCCC
Confidence 221 122233322 444 77765432 36888998754
No 148
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.19 E-value=0.99 Score=51.21 Aligned_cols=248 Identities=8% Similarity=-0.080 Sum_probs=129.3
Q ss_pred CCCceEEEEECCCCcEEEcccC-CCCCC-Ccce-EEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcc
Q psy14726 360 SPTDFVETYDTRADRWVKIEQV-DPMGP-RAYH-GTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRC 435 (712)
Q Consensus 360 ~~~~~v~~~d~~~~~W~~~~~~-~~~~~-r~~~-~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~ 435 (712)
.....++..+...+.|..+... .+... .... +.+.. +++.++++...++.....++.+|..+++........ ...
T Consensus 95 ~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~ 173 (710)
T 2xdw_A 95 QNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKF 173 (710)
T ss_dssp CSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECS
T ss_pred ceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-ccc
Confidence 3445677777666666643111 11111 1112 22222 666666655433333457999999999886542111 111
Q ss_pred eeEEEE-ECCeEEEEcccCCC-----------CCCceeEEeecCCCceE--EcccCC-ccccceeEEE-ECCEEEEEccc
Q psy14726 436 YVSTAV-HHDVIYAMGGYNGQ-----------RRQNSVEKYNYTENQWS--LIAPMN-VERSDASATT-LQGKIYITGGF 499 (712)
Q Consensus 436 ~~~~~~-~~~~iyv~GG~~~~-----------~~~~~v~~yd~~~~~W~--~~~~~p-~~r~~~~~~~-~~~~iyv~GG~ 499 (712)
.+.+. -+|+-++++..... .....+++++..+.+.. .+...+ .+........ -+|+..+++..
T Consensus 174 -~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 174 -SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp -CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred -ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 12233 35654454443322 22456899998887642 221222 1221122222 25554444433
Q ss_pred CCCCccCceEEeeCCC------C--eeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCC---cEEEc
Q psy14726 500 NGHNCLNSCEVYDPEC------N--QWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTK---TWSQV 568 (712)
Q Consensus 500 ~~~~~~~~v~~yd~~~------~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~---~W~~~ 568 (712)
.+....+.++.+|..+ . .+..+..-.... .......++.||+.+..+. ....++.+|..+. .|+.+
T Consensus 253 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l 329 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHS--PNYRLINIDFTDPEESKWKVL 329 (710)
T ss_dssp CSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEE
T ss_pred ccCCCccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCcccceec
Confidence 2222246899999876 4 577775432222 1223334678888875432 2467999998875 58887
Q ss_pred CCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCe-EEEc
Q psy14726 569 PDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDE-WYEA 615 (712)
Q Consensus 569 ~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~-W~~~ 615 (712)
........-.+++.. ++.+++.+..++ ...++++|+.+++ ...+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~lv~~~~~~g---~~~l~~~~~~~g~~~~~l 375 (710)
T 2xdw_A 330 VPEHEKDVLEWVACVRSNFLVLCYLHDV---KNTLQLHDLATGALLKIF 375 (710)
T ss_dssp ECCCSSCEEEEEEEETTTEEEEEEEETT---EEEEEEEETTTCCEEEEE
T ss_pred cCCCCCCeEEEEEEEcCCEEEEEEEECC---EEEEEEEECCCCCEEEec
Confidence 443221223344555 778888766554 3468999986554 4444
No 149
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.19 E-value=0.42 Score=47.32 Aligned_cols=188 Identities=8% Similarity=0.108 Sum_probs=91.0
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++..++.|+.+ ..+..||....... +.....+-........++..++.|+.+ ..+..||.....- .+.
T Consensus 113 ~~~~l~~~~~d-----~~i~~~d~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~-~~~ 180 (313)
T 3odt_A 113 QDGVVISGSWD-----KTAKVWKEGSLVYN-LQAHNASVWDAKVVSFSENKFLTASAD-----KTIKLWQNDKVIK-TFS 180 (313)
T ss_dssp ETTEEEEEETT-----SEEEEEETTEEEEE-EECCSSCEEEEEEEETTTTEEEEEETT-----SCEEEEETTEEEE-EEC
T ss_pred cCCEEEEEeCC-----CCEEEEcCCcEEEe-cccCCCceeEEEEccCCCCEEEEEECC-----CCEEEEecCceEE-EEe
Confidence 55566677653 35778882222221 111111111111122256777777654 3577888322211 111
Q ss_pred cCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccce
Q psy14726 476 PMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCN 554 (712)
Q Consensus 476 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~ 554 (712)
..........+..-++. ++.|+.+ ..+..||..+.+-...-.... ..-.+++.. +++ ++.||.+ ..
T Consensus 181 ~~~~~~i~~~~~~~~~~-~~~~~~d-----g~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~-l~~~~~d-----g~ 247 (313)
T 3odt_A 181 GIHNDVVRHLAVVDDGH-FISCSND-----GLIKLVDMHTGDVLRTYEGHE-SFVYCIKLLPNGD-IVSCGED-----RT 247 (313)
T ss_dssp SSCSSCEEEEEEEETTE-EEEEETT-----SEEEEEETTTCCEEEEEECCS-SCEEEEEECTTSC-EEEEETT-----SE
T ss_pred ccCcccEEEEEEcCCCe-EEEccCC-----CeEEEEECCchhhhhhhhcCC-ceEEEEEEecCCC-EEEEecC-----CE
Confidence 11111122222233677 6667655 358889987665322211111 111222222 444 5556543 57
Q ss_pred EEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 555 GEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 555 v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
+..||..+.+....-..+... -.+++.. +++ ++.||.++ .+.+||..++++...
T Consensus 248 v~iwd~~~~~~~~~~~~~~~~-i~~~~~~~~~~-~~~~~~dg-----~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 248 VRIWSKENGSLKQVITLPAIS-IWSVDCMSNGD-IIVGSSDN-----LVRIFSQEKSRWASE 302 (313)
T ss_dssp EEEECTTTCCEEEEEECSSSC-EEEEEECTTSC-EEEEETTS-----CEEEEESCGGGCCC-
T ss_pred EEEEECCCCceeEEEeccCce-EEEEEEccCCC-EEEEeCCC-----cEEEEeCCCCceeeh
Confidence 889999887654432222211 1223322 556 55677655 688999998887554
No 150
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.16 E-value=1.2 Score=44.46 Aligned_cols=189 Identities=9% Similarity=0.094 Sum_probs=89.4
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCC--cEEEcccCCCCCCCcceEEEEE---CCEEEEEeecCCCCccceEEEEECCCC
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRAD--RWVKIEQVDPMGPRAYHGTAVI---GYNIYVIGGFDGNEYYNSCRCFNAVTK 422 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~--~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~ 422 (712)
+..++.|+.+ ..+..||..++ .+..+.... .....-.+++.. ++.+++.|+.++ .+..||..+.
T Consensus 23 ~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~d~~~l~s~~~dg-----~v~vwd~~~~ 91 (351)
T 3f3f_A 23 GRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWR-AHDSSIVAIDWASPEYGRIIASASYDK-----TVKLWEEDPD 91 (351)
T ss_dssp SSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEE-CCSSCEEEEEECCGGGCSEEEEEETTS-----CEEEEEECTT
T ss_pred CCEEEEeeCC-----CeEEEEECCCCCCcceecceec-cCCCcEEEEEEcCCCCCCEEEEEcCCC-----eEEEEecCCC
Confidence 3455666632 35777776643 333311111 011112233333 267778887543 4778887664
Q ss_pred -------cEEEeCCCCCCccee-EEEEE-C--CeEEEEcccCCCCCCceeEEeecCCCc----eEEc---ccCC---ccc
Q psy14726 423 -------VWKEIAPMNFKRCYV-STAVH-H--DVIYAMGGYNGQRRQNSVEKYNYTENQ----WSLI---APMN---VER 481 (712)
Q Consensus 423 -------~W~~~~~~~~~r~~~-~~~~~-~--~~iyv~GG~~~~~~~~~v~~yd~~~~~----W~~~---~~~p---~~r 481 (712)
.|..+..+....... +++.. + +..++.|+.+ ..+..||..+.+ |..- ..+. ...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 92 QEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND-----GILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp SCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred cccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC-----CcEEEecCCChHHhccccccccccccccccCCc
Confidence 344333332222222 23332 3 6677777643 468888877654 3211 1111 111
Q ss_pred -cceeEEEE-----CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcce-EEEEE-CC----EEEEEcCCCCC
Q psy14726 482 -SDASATTL-----QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGV-SCIAY-HE----CIYVIGGFNGM 549 (712)
Q Consensus 482 -~~~~~~~~-----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~~~-~~----~iyv~GG~~~~ 549 (712)
....+..+ ++..++.|+.++ .+..++........+..++...... +++.. ++ .+++.|+.+
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d-- 239 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALEQ-----AIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD-- 239 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETTE-----EEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT--
T ss_pred ccceeEEEeccCCCCCcEEEEecCCC-----cEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC--
Confidence 11112222 266777777553 3445555666665554443322222 22323 33 678888765
Q ss_pred CccceEEEEeCCC
Q psy14726 550 SRMCNGEKYNPVT 562 (712)
Q Consensus 550 ~~~~~v~~yd~~~ 562 (712)
..+..||..+
T Consensus 240 ---g~i~iwd~~~ 249 (351)
T 3f3f_A 240 ---GRIRIFKITE 249 (351)
T ss_dssp ---SCEEEEEEEE
T ss_pred ---CeEEEEeCCC
Confidence 3455666543
No 151
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.14 E-value=0.27 Score=56.49 Aligned_cols=211 Identities=10% Similarity=0.057 Sum_probs=110.3
Q ss_pred eEEEEECCCCcEEEcccCCCC---CCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCC------CcEE---Ee---
Q psy14726 364 FVETYDTRADRWVKIEQVDPM---GPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVT------KVWK---EI--- 427 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~---~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~------~~W~---~~--- 427 (712)
-+..||+.++++......... ....-+++... ++.|++. ... ..+++||+.+ ..+. ..
T Consensus 393 GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWig-T~~-----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (758)
T 3ott_A 393 SINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIS-TCL-----GGIFVVDKHKLMQSTSGQYIAEQNYSVH 466 (758)
T ss_dssp EEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEE-ESS-----SCEEEEEHHHHHHCCSSEEECSEEECGG
T ss_pred cHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEE-ECC-----CceEEEccccccccCCcceecccccccc
Confidence 578899999988765321111 11112233322 5678773 321 2378888764 2221 11
Q ss_pred CCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCcc-ccceeEEEE--CCEEEEEcccCCCC
Q psy14726 428 APMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE-RSDASATTL--QGKIYITGGFNGHN 503 (712)
Q Consensus 428 ~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~ 503 (712)
..++... -.++.. -+|.|++.||.. .-+.+||+.+++++....-... .....+... +|.|++.. .
T Consensus 467 ~~l~~~~-i~~i~~d~~g~lWi~~~t~-----~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~---- 535 (758)
T 3ott_A 467 NGLSGMF-INQIIPDNEGNVWVLLYNN-----KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H---- 535 (758)
T ss_dssp GTCSCSC-EEEEEECTTSCEEEEETTC-----SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T----
T ss_pred cccccce-eeeEEEcCCCCEEEEccCC-----CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c----
Confidence 1122211 122222 357899866542 3489999999998876321111 111222223 57888643 2
Q ss_pred ccCceEEeeCCCCeeEEeC--CCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEE
Q psy14726 504 CLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIE 581 (712)
Q Consensus 504 ~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~ 581 (712)
.-+.+||+.+++++... .+|.. .-.+++.-+|.|++.+. ..+.+|||.+.+..... ++......++.
T Consensus 536 --~Gl~~~~~~~~~~~~~~~~gl~~~-~i~~i~~~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~-~~~~~~~~~~~ 604 (758)
T 3ott_A 536 --GGVMRINPKDESQQSISFGSFSNN-EILSMTCVKNSIWVSTT-------NGLWIIDRKTMDARQQN-MTNKRFTSLLF 604 (758)
T ss_dssp --TEEEEECC--CCCCBCCCCC---C-CEEEEEEETTEEEEEES-------SCEEEEETTTCCEEEC---CCCCCSEEEE
T ss_pred --CceEEEecCCCceEEecccCCCcc-ceEEEEECCCCEEEECC-------CCeEEEcCCCceeEEec-CCCCceeeeEE
Confidence 24889999988876553 33322 23344445788988763 56899999998877653 23222222222
Q ss_pred EE-CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 582 VI-DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 582 ~~-~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
.. +|.|| +||.+| +-.|||+.
T Consensus 605 ~~~~G~l~-fG~~~G------l~~f~p~~ 626 (758)
T 3ott_A 605 DPKEDCVY-LGGADG------FGISHSNL 626 (758)
T ss_dssp ETTTTEEE-EECBSE------EEEEEC--
T ss_pred ECCCCcEE-EecCCc------eEEEChhh
Confidence 22 45554 566543 56777764
No 152
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.02 E-value=0.53 Score=47.74 Aligned_cols=234 Identities=10% Similarity=0.058 Sum_probs=111.3
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCc----
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKV---- 423 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~---- 423 (712)
..++.|+. ...+..||..+++....-. ....-.+++.. ++..++.|+.+.......+..||..+..
T Consensus 87 ~~l~s~~~-----dg~i~iwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~ 157 (369)
T 3zwl_B 87 KYCVTGSA-----DYSIKLWDVSNGQCVATWK----SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHE 157 (369)
T ss_dssp SEEEEEET-----TTEEEEEETTTCCEEEEEE----CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCC
T ss_pred CEEEEEeC-----CCeEEEEECCCCcEEEEee----cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCcccee
Confidence 34555553 2368888988776554211 11222233333 5566666654322223567777766543
Q ss_pred EEEeCCCCC-------C-cceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCC-CceEEcccCCccccceeEEEE--CC
Q psy14726 424 WKEIAPMNF-------K-RCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTE-NQWSLIAPMNVERSDASATTL--QG 491 (712)
Q Consensus 424 W~~~~~~~~-------~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~ 491 (712)
+......+. . ..-.+++. .+++.+++|+.+ ..+..||..+ .+-.. .+.........+.+ ++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~ 230 (369)
T 3zwl_B 158 LTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD-----GKISKYDVSNNYEYVD--SIDLHEKSISDMQFSPDL 230 (369)
T ss_dssp EEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-----SEEEEEETTTTTEEEE--EEECCSSCEEEEEECTTS
T ss_pred ecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-----CEEEEEECCCCcEeEE--EEecCCCceeEEEECCCC
Confidence 222111110 0 01122222 355666777643 4689999887 33221 11111122222333 66
Q ss_pred EEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCC---------ccceEEEEeCCC
Q psy14726 492 KIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMS---------RMCNGEKYNPVT 562 (712)
Q Consensus 492 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---------~~~~v~~yd~~~ 562 (712)
..++.|+.+ ..+..||..+.+....-..+.+ ....+..-++..+++|+.++.. ....+..||..+
T Consensus 231 ~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 304 (369)
T 3zwl_B 231 TYFITSSRD-----TNSFLVDVSTLQVLKKYETDCP-LNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF 304 (369)
T ss_dssp SEEEEEETT-----SEEEEEETTTCCEEEEEECSSC-EEEEEECSSSSEEEEEECCC-------------CEEEEEETTT
T ss_pred CEEEEecCC-----ceEEEEECCCCceeeeecCCCC-ceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC
Confidence 677777655 3688899887664333221111 1111222245555555533211 112678888776
Q ss_pred CcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 563 KTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 563 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
.+-... +.........+.+ ++++++.||.++ .+.+||..++.
T Consensus 305 ~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~dg-----~v~iw~~~~~~ 348 (369)
T 3zwl_B 305 EEEIGR--VQGHFGPLNTVAISPQGTSYASGGEDG-----FIRLHHFEKSY 348 (369)
T ss_dssp CCEEEE--EECCSSCEEEEEECTTSSEEEEEETTS-----EEEEEEECHHH
T ss_pred Ccchhh--eecccCcEEEEEECCCCCEEEEEcCCC-----eEEEEECcccc
Confidence 543222 1111112222333 677888888765 56777766543
No 153
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.01 E-value=0.22 Score=52.35 Aligned_cols=146 Identities=9% Similarity=0.126 Sum_probs=77.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++.+++.||.+ ..+..||..+++....-..... .-.+++. .++++++.||.+ ..+..||..+.+- +
T Consensus 119 ~~~~l~s~s~D-----g~i~vwd~~~~~~~~~l~~h~~-~V~~v~~~~~~~~l~sgs~D-----~~i~iwd~~~~~~--~ 185 (410)
T 1vyh_C 119 VFSVMVSASED-----ATIKVWDYETGDFERTLKGHTD-SVQDISFDHSGKLLASCSAD-----MTIKLWDFQGFEC--I 185 (410)
T ss_dssp SSSEEEEEESS-----SCEEEEETTTCCCCEEECCCSS-CEEEEEECTTSSEEEEEETT-----SCCCEEETTSSCE--E
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEEeccCC-cEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCce--e
Confidence 34567777754 3588899887764322111111 1122222 356788888755 3577788766543 2
Q ss_pred ccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCC
Q psy14726 475 APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMS 550 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 550 (712)
..+..-.....++.+ ++..++.||.+ ..+..||..++.-... +.........+.. ++.+++.|+.+
T Consensus 186 ~~~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D--- 255 (410)
T 1vyh_C 186 RTMHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSND--- 255 (410)
T ss_dssp ECCCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETT---
T ss_pred EEEcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCC---
Confidence 222211112223333 56677777765 3688889887753221 1111112222222 56777777754
Q ss_pred ccceEEEEeCCCCcEE
Q psy14726 551 RMCNGEKYNPVTKTWS 566 (712)
Q Consensus 551 ~~~~v~~yd~~~~~W~ 566 (712)
..+..||..+....
T Consensus 256 --~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 256 --QTVRVWVVATKECK 269 (410)
T ss_dssp --SCEEEEETTTCCEE
T ss_pred --CeEEEEECCCCcee
Confidence 46778888776543
No 154
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.98 E-value=0.19 Score=50.11 Aligned_cols=195 Identities=7% Similarity=0.036 Sum_probs=101.1
Q ss_pred CCEEEEEeecC--CCCccceEEEEECCCCcEEEeCCC---CCCcceeEEEE-EC-CeEEEEcccCCCCCCceeEEeecCC
Q psy14726 396 GYNIYVIGGFD--GNEYYNSCRCFNAVTKVWKEIAPM---NFKRCYVSTAV-HH-DVIYAMGGYNGQRRQNSVEKYNYTE 468 (712)
Q Consensus 396 ~~~lyv~GG~~--~~~~~~~v~~yd~~~~~W~~~~~~---~~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~v~~yd~~~ 468 (712)
++.+|+.++.. .......+++||+.++++..+... .....-++++. -+ |++|+.+.. +.+.+||+.
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~~- 100 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTD- 100 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETT-
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeCC-
Confidence 56777771000 001124689999999988765431 01112234444 34 788887541 368999998
Q ss_pred CceEEc-ccCCcc--ccceeEEEE--CCEEEEEcccCC----------CCccCceEEeeCCCCeeEEeC-CCCCCCcceE
Q psy14726 469 NQWSLI-APMNVE--RSDASATTL--QGKIYITGGFNG----------HNCLNSCEVYDPECNQWTLIE-PMRHRRSGVS 532 (712)
Q Consensus 469 ~~W~~~-~~~p~~--r~~~~~~~~--~~~iyv~GG~~~----------~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~ 532 (712)
++...+ ...... ........+ +|++|+.....+ ......+++||+. .+...+. .... ..+
T Consensus 101 g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~---~~~ 176 (314)
T 1pjx_A 101 GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQF---PNG 176 (314)
T ss_dssp SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESS---EEE
T ss_pred CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCC---cce
Confidence 776655 332211 111222333 678998764321 1123578999987 5555442 1111 123
Q ss_pred EEEE-----CC-EEEEEcCCCCCCccceEEEEeCC-CCcEEE---cCCCCCC--ccceEEEEE-CCEEEEEcccCCCcee
Q psy14726 533 CIAY-----HE-CIYVIGGFNGMSRMCNGEKYNPV-TKTWSQ---VPDMYNP--RSNFAIEVI-DDMIFAIGGFNGVTTI 599 (712)
Q Consensus 533 ~~~~-----~~-~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~---~~~~p~~--r~~~~~~~~-~~~i~v~GG~~~~~~~ 599 (712)
.+.. ++ .||+.... ...+++||+. +.++.. ...++.. ..-.+++.- ++.+|+....+
T Consensus 177 i~~~~~~d~dg~~l~v~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~----- 246 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS----- 246 (314)
T ss_dssp EEEEECTTSCEEEEEEEETT-----TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT-----
T ss_pred EEEecccCCCCCEEEEEECC-----CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC-----
Confidence 3333 34 57777532 2578889875 443321 1112211 111223332 67888874322
Q ss_pred eeEEEEECCCCe
Q psy14726 600 YHVECYDEKTDE 611 (712)
Q Consensus 600 ~~v~~yd~~~~~ 611 (712)
..+.+||+++++
T Consensus 247 ~~i~~~d~~~g~ 258 (314)
T 1pjx_A 247 SHIEVFGPDGGQ 258 (314)
T ss_dssp TEEEEECTTCBS
T ss_pred CEEEEEcCCCCc
Confidence 268899998554
No 155
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.95 E-value=1.4 Score=48.67 Aligned_cols=117 Identities=16% Similarity=0.200 Sum_probs=69.6
Q ss_pred EEEECCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCCC---cc---eeEEEEECCeEEEEcccCCCCCCceeEE
Q psy14726 392 TAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFK---RC---YVSTAVHHDVIYAMGGYNGQRRQNSVEK 463 (712)
Q Consensus 392 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~---r~---~~~~~~~~~~iyv~GG~~~~~~~~~v~~ 463 (712)
-++.++.||+.++. ..++.+|..+++ |+.-...+.. .+ ..+.++.+++||+... ...++.
T Consensus 64 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~A 131 (582)
T 1flg_A 64 AIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASVVA 131 (582)
T ss_dssp CEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEEEE
T ss_pred cEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEEEE
Confidence 35569999988653 249999998876 8765433321 11 1344568899988532 246999
Q ss_pred eecCCCc--eEEcccCCccc--cceeEEEECC------EEEEEcccCC-CCccCceEEeeCCCCe--eEEe
Q psy14726 464 YNYTENQ--WSLIAPMNVER--SDASATTLQG------KIYITGGFNG-HNCLNSCEVYDPECNQ--WTLI 521 (712)
Q Consensus 464 yd~~~~~--W~~~~~~p~~r--~~~~~~~~~~------~iyv~GG~~~-~~~~~~v~~yd~~~~~--W~~~ 521 (712)
+|..|.+ |+.-..-+... ...+-++.++ .||+ |...+ ......+..||.++++ |+.-
T Consensus 132 lD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 132 LNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp EESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred EECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeecC
Confidence 9998875 87543221111 1122344566 6665 33211 1224579999998876 8653
No 156
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.93 E-value=0.55 Score=47.11 Aligned_cols=227 Identities=10% Similarity=0.077 Sum_probs=107.2
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..++.|+.+ ..+..++............. .......... ++..++.|+.++ .+..+|.....-..
T Consensus 98 g~~l~s~~~d-----~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~s~s~d~-----~~~~~d~~~~~~~~ 164 (340)
T 4aow_A 98 GQFALSGSWD-----GTLRLWDLTTGTTTRRFVGH---TKDVLSVAFSSDNRQIVSGSRDK-----TIKLWNTLGVCKYT 164 (340)
T ss_dssp SSEEEEEETT-----SEEEEEETTTTEEEEEEECC---SSCEEEEEECTTSSCEEEEETTS-----CEEEECTTSCEEEE
T ss_pred CCEEEEEccc-----ccceEEeecccceeeeecCC---CCceeEEEEeecCccceeecCCC-----eEEEEEeCCCceEE
Confidence 3345555532 34666776666554421111 1111122222 455666666543 46677776554333
Q ss_pred eCCCCCCcceeEEEEE---CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCC
Q psy14726 427 IAPMNFKRCYVSTAVH---HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNG 501 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 501 (712)
.........-..++.. .+.+++.||.+ ..+..||..+.+....-.... ....++.+ ++++++.||.++
T Consensus 165 ~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d-----~~i~i~d~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~s~Dg 237 (340)
T 4aow_A 165 VQDESHSEWVSCVRFSPNSSNPIIVSCGWD-----KLVKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDG 237 (340)
T ss_dssp ECSSSCSSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTTEEEEEECCCS--SCEEEEEECTTSSEEEEEETTC
T ss_pred EEeccccCcccceEEccCCCCcEEEEEcCC-----CEEEEEECCCCceeeEecCCC--CcEEEEEECCCCCEEEEEeCCC
Confidence 2222111111122221 23566666643 357888888766433211111 11122233 677888887664
Q ss_pred CCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEc-C-CCC-----CC
Q psy14726 502 HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-P-DMY-----NP 574 (712)
Q Consensus 502 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~-~~p-----~~ 574 (712)
.+..||..+.+-... +.....-.+++...+..++.|+.+ ..+..||..+..-... . ... ..
T Consensus 238 -----~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~h 305 (340)
T 4aow_A 238 -----QAMLWDLNEGKHLYT--LDGGDIINALCFSPNRYWLCAATG-----PSIKIWDLEGKIIVDELKQEVISTSSKAE 305 (340)
T ss_dssp -----EEEEEETTTTEEEEE--EECSSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTEEEEEECCC-------CC
T ss_pred -----eEEEEEeccCceeee--ecCCceEEeeecCCCCceeeccCC-----CEEEEEECCCCeEEEeccccceeeeccCC
Confidence 577888876653222 221122223333344445555543 4678888876643221 1 110 00
Q ss_pred ccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 575 RSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 575 r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
......+.+ +++.++.||.++ .|.+||.++++
T Consensus 306 ~~~v~~l~~s~dg~~l~sgs~Dg-----~v~iW~~~tGt 339 (340)
T 4aow_A 306 PPQCTSLAWSADGQTLFAGYTDN-----LVRVWQVTIGT 339 (340)
T ss_dssp CCCEEEEEECTTSSEEEEEETTS-----CEEEEEEEC--
T ss_pred CCCEEEEEECCCCCEEEEEeCCC-----EEEEEeCCCcC
Confidence 111122223 677888888776 57788877653
No 157
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.91 E-value=0.4 Score=48.37 Aligned_cols=200 Identities=11% Similarity=0.003 Sum_probs=105.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++.+|+.+..+ ..+++||+.++++..+...+ ...-.+++. -+|++|+.+... ......+++||+.+.....+
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~-~~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGD-FKSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTT-SSSCCEEEEECTTSCSCEEE
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCC-CCCCceEEEEeCCCCEEEEE
Confidence 56788776532 46899999999887654221 122334444 367888875322 11225799999998876533
Q ss_pred -ccCCccccceeEEEE--CCEEEEEcccC-CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC-EEEEEcCCCC
Q psy14726 475 -APMNVERSDASATTL--QGKIYITGGFN-GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFNG 548 (712)
Q Consensus 475 -~~~p~~r~~~~~~~~--~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~ 548 (712)
...... .......+ ++++|+..... .......++++|+.+.+...+..-. ....+.+.. ++ .||+....
T Consensus 128 ~~~~~~~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~i~~~~dg~~l~v~~~~-- 202 (333)
T 2dg1_A 128 IEDLSTA-YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI--SVANGIALSTDEKVLWVTETT-- 202 (333)
T ss_dssp ECSSSSC-CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE--SSEEEEEECTTSSEEEEEEGG--
T ss_pred EccCccC-CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC--CcccceEECCCCCEEEEEeCC--
Confidence 222211 12222333 67888865321 1122357999999887766543110 111223222 34 58887532
Q ss_pred CCccceEEEEeCCC--CcEEEcC-----CCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 549 MSRMCNGEKYNPVT--KTWSQVP-----DMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 549 ~~~~~~v~~yd~~~--~~W~~~~-----~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
...+++||+.+ .....+. ..+......+++.- ++.+|+....+ ..+.+||++...-..+
T Consensus 203 ---~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~-----~~v~~~d~~g~~~~~~ 269 (333)
T 2dg1_A 203 ---ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQ-----GRVLVFNKRGYPIGQI 269 (333)
T ss_dssp ---GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETT-----TEEEEECTTSCEEEEE
T ss_pred ---CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCC-----CEEEEECCCCCEEEEE
Confidence 35789999854 2333211 11111111223332 57787764322 2688999965544333
No 158
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.89 E-value=0.54 Score=49.46 Aligned_cols=202 Identities=12% Similarity=-0.011 Sum_probs=108.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEE-EECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA-VHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++++...+...+......++.+|.....-..+..-.. . -.+.+ .-+|+.+++++..+ ....++.+|+.+.+...+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~-~-v~~~~~Spdg~~la~~s~~~--~~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQ-P-LMSPAWSPDGSKLAYVTFES--GRSALVIQTLANGAVRQV 218 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESS-C-EEEEEECTTSSEEEEEECTT--SSCEEEEEETTTCCEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCC-c-ceeeEEcCCCCEEEEEEecC--CCcEEEEEECCCCcEEEe
Confidence 3455444443222223678999987665444432111 1 12222 23666666665432 236899999999887766
Q ss_pred ccCCccccceeEEEE--CCE-EEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCC
Q psy14726 475 APMNVERSDASATTL--QGK-IYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGM 549 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 549 (712)
...+. ...+..+ +|+ |++.+..++ ...++.+|..+++...+...+. ....... +++.+++++..+
T Consensus 219 ~~~~~---~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~~~~~l~~~~~---~~~~~~~spdg~~l~~~s~~~- 288 (415)
T 2hqs_A 219 ASFPR---HNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASGQIRQVTDGRS---NNTEPTWFPDSQNLAFTSDQA- 288 (415)
T ss_dssp ECCSS---CEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCCEEECCCCSS---CEEEEEECTTSSEEEEEECTT-
T ss_pred ecCCC---cccCEEEcCCCCEEEEEEecCC---CceEEEEECCCCCEEeCcCCCC---cccceEECCCCCEEEEEECCC-
Confidence 54332 2223333 554 554554332 2569999999988766654321 1222222 555444443211
Q ss_pred CccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEcc
Q psy14726 550 SRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 550 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 616 (712)
....++.+|..+.+-..+... .....+.+.. +++.+++++.++. ...++++|+.+++...+.
T Consensus 289 -g~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~spdG~~l~~~~~~~g--~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 289 -GRPQVYKVNINGGAPQRITWE--GSQNQDADVSSDGKFMVMVSSNGG--QQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp -SSCEEEEEETTSSCCEECCCS--SSEEEEEEECTTSSEEEEEEECSS--CEEEEEEETTTCCEEECC
T ss_pred -CCcEEEEEECCCCCEEEEecC--CCcccCeEECCCCCEEEEEECcCC--ceEEEEEECCCCCEEEec
Confidence 135789999988765554321 1111222222 5655555554322 247899999999887664
No 159
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.89 E-value=0.46 Score=48.25 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=56.7
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWK 425 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 425 (712)
+.+++.|+.+ ..+..||..+++-...-.. ....-.+++.. ++.+++.|+.+ ..+..||..+++-.
T Consensus 85 ~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~ 151 (366)
T 3k26_A 85 HPLLAVAGSR-----GIIRIINPITMQCIKHYVG---HGNAINELKFHPRDPNLLLSVSKD-----HALRLWNIQTDTLV 151 (366)
T ss_dssp CEEEEEEETT-----CEEEEECTTTCCEEEEEES---CCSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTTTEEE
T ss_pred CCEEEEecCC-----CEEEEEEchhceEeeeecC---CCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEEeecCeEE
Confidence 3456666642 3688888877654431111 11122233333 56777787754 35899999887654
Q ss_pred Ee-CCCCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCc
Q psy14726 426 EI-APMNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQ 470 (712)
Q Consensus 426 ~~-~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 470 (712)
.. ..+...... .+++. -++..++.||.+ ..+..||..+.+
T Consensus 152 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~ 194 (366)
T 3k26_A 152 AIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRINSKR 194 (366)
T ss_dssp EEECSTTSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESCSHH
T ss_pred EEecccccccCceeEEEECCCCCEEEEecCC-----CCEEEEECCCCc
Confidence 33 222222222 22332 246677777754 458888877653
No 160
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.87 E-value=0.95 Score=45.34 Aligned_cols=230 Identities=8% Similarity=0.018 Sum_probs=107.4
Q ss_pred ceEEEEECC-CCcEEEcccCCCCCCCcceEEEEE-CC-EEEEEeecCCCCccceEEEEECC--CCcEEEeCCCCCCccee
Q psy14726 363 DFVETYDTR-ADRWVKIEQVDPMGPRAYHGTAVI-GY-NIYVIGGFDGNEYYNSCRCFNAV--TKVWKEIAPMNFKRCYV 437 (712)
Q Consensus 363 ~~v~~~d~~-~~~W~~~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~~~~r~~~ 437 (712)
..+..||.. ++.+..+.... ....-.++++. ++ .+|+.+. .. ..+..|+.. ++++..+..++....-.
T Consensus 15 ~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~-~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQVVD--VPGQVQPMVVSPDKRYLYVGVR-PE----FRVLAYRIAPDDGALTFAAESALPGSLT 87 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEE--CSSCCCCEEECTTSSEEEEEET-TT----TEEEEEEECTTTCCEEEEEEEECSSCCS
T ss_pred CeEEEEEECCCCcEEEeeeEe--cCCCCceEEECCCCCEEEEeec-CC----CeEEEEEecCCCCceeeccccccCCCCc
Confidence 357777764 34443321111 11112233333 44 4555443 21 456776665 77877654443222223
Q ss_pred EEEE-ECCe-EEEEcccCCCCCCceeEEeecCCC-ceEEcccCCccccceeEEEE-CC-EEEEEcccCCCCccCceEEee
Q psy14726 438 STAV-HHDV-IYAMGGYNGQRRQNSVEKYNYTEN-QWSLIAPMNVERSDASATTL-QG-KIYITGGFNGHNCLNSCEVYD 512 (712)
Q Consensus 438 ~~~~-~~~~-iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd 512 (712)
.++. -+++ +|+.+.. ...+.+||.... ....+...+....-++++.- ++ .+|+.+..+ ..+.+||
T Consensus 88 ~~~~s~dg~~l~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d 157 (343)
T 1ri6_A 88 HISTDHQGQFVFVGSYN-----AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ-----DRICLFT 157 (343)
T ss_dssp EEEECTTSSEEEEEETT-----TTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG-----TEEEEEE
T ss_pred EEEEcCCCCEEEEEecC-----CCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCC-----CEEEEEE
Confidence 3333 3444 6655432 245888887422 22222222222222223332 33 677765332 4688999
Q ss_pred CCC-CeeEEeC----CCCCCCcceEEEEE-CC-EEEEEcCCCCCCccceEEEEeCC--CCcEEE---cCCCCCC---ccc
Q psy14726 513 PEC-NQWTLIE----PMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPV--TKTWSQ---VPDMYNP---RSN 577 (712)
Q Consensus 513 ~~~-~~W~~~~----~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~--~~~W~~---~~~~p~~---r~~ 577 (712)
..+ ++...+. ..+....-..++.. ++ .+|+.+.. ...+..||.. +.++.. +...+.. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-----~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 232 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-----NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRW 232 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-----TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCC
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC-----CCEEEEEEecCCCCcEEEEeeccccCccccccCC
Confidence 887 6665332 11211111122222 34 57777643 2568888874 344432 2323322 112
Q ss_pred eEEEEE--CC-EEEEEcccCCCceeeeEEEEECC--CCeEEEccCCC
Q psy14726 578 FAIEVI--DD-MIFAIGGFNGVTTIYHVECYDEK--TDEWYEATDMN 619 (712)
Q Consensus 578 ~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~p 619 (712)
...+.+ ++ .+|+.++.+ ..+.+||+. ++++..+..++
T Consensus 233 ~~~i~~s~dg~~l~v~~~~~-----~~i~v~d~~~~~~~~~~~~~~~ 274 (343)
T 1ri6_A 233 AADIHITPDGRHLYACDRTA-----SLITVFSVSEDGSVLSKEGFQP 274 (343)
T ss_dssp EEEEEECTTSSEEEEEETTT-----TEEEEEEECTTSCCEEEEEEEE
T ss_pred ccceEECCCCCEEEEEecCC-----CEEEEEEEcCCCCceEEeeeec
Confidence 222333 34 566665433 257777776 56676664443
No 161
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.86 E-value=0.39 Score=49.61 Aligned_cols=109 Identities=12% Similarity=0.088 Sum_probs=56.3
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCC-cc---ccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCC
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMN-VE---RSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECN 516 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~---r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 516 (712)
++ +++.|+.+ ..+..||..+.+....-... .. ......+.+ ++++++.|+.++ ....+..||..+.
T Consensus 197 ~~-~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 197 RG-LIATGFNN-----GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--SFGCITLYETEFG 268 (397)
T ss_dssp TS-EEEEECTT-----SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET--TEEEEEEEETTTC
T ss_pred Cc-eEEEEeCC-----CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC--CCceEEEEECCCC
Confidence 45 66666643 46889998876543221110 01 122223333 567777776541 1146888998776
Q ss_pred eeEEe-CCCC--C--------CCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCc
Q psy14726 517 QWTLI-EPMR--H--------RRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKT 564 (712)
Q Consensus 517 ~W~~~-~~~p--~--------~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 564 (712)
+-... ...+ . .......+.+ ++.+++.|+.+ ..+..||..+.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~ 324 (397)
T 1sq9_A 269 ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD-----GKLRFWDVKTKE 324 (397)
T ss_dssp CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTTE
T ss_pred cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEcCCCc
Confidence 53221 1100 0 1122222233 46667777653 478899987764
No 162
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.76 E-value=1.9 Score=43.44 Aligned_cols=220 Identities=10% Similarity=0.118 Sum_probs=115.8
Q ss_pred EEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCC-CCcceeEEE-EE
Q psy14726 365 VETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN-FKRCYVSTA-VH 442 (712)
Q Consensus 365 v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~-~~r~~~~~~-~~ 442 (712)
++.-.-....|..+............++.+.++.+|++|.. ..+++-+-.-.+|+.+.... .+-....++ .-
T Consensus 58 i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~------g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~ 131 (327)
T 2xbg_A 58 LMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP------PIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALG 131 (327)
T ss_dssp EEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET------TEEEEESSTTSSCEECCCCTTCSSCEEEEEEEE
T ss_pred EEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECC------CeEEEECCCCCCceECccccCCCCCeEEEEEEC
Confidence 44333344689985322111122334555557888887532 23555433457899876432 222223343 34
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEee-CCCCeeEE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYD-PECNQWTL 520 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd-~~~~~W~~ 520 (712)
++.+|+.|.. ..+++-+-...+|+.+.... ...-++++.. ++.+|++|. .+ .+++-+ ..-.+|+.
T Consensus 132 ~~~~~~~~~~------g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g~-~G-----~~~~S~d~gG~tW~~ 198 (327)
T 2xbg_A 132 NGSAEMITNV------GAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEYVAVSS-RG-----SFYSTWEPGQTAWEP 198 (327)
T ss_dssp TTEEEEEETT------CCEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCEEEEET-TS-----SEEEEECTTCSSCEE
T ss_pred CCCEEEEeCC------ccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcEEEEEC-CC-----cEEEEeCCCCCceeE
Confidence 6788887742 23555444567899885432 2222333333 566776653 21 244443 33578998
Q ss_pred eCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCC-CCcEEEcCCC--CCCccceEEEEE-CCEEEEEcccCC
Q psy14726 521 IEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPV-TKTWSQVPDM--YNPRSNFAIEVI-DDMIFAIGGFNG 595 (712)
Q Consensus 521 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~--p~~r~~~~~~~~-~~~i~v~GG~~~ 595 (712)
+.. +.+...+.++.. ++.+|+++.. ..++..+.. -.+|+.+... +.....++++.. ++.+|++|+..
T Consensus 199 ~~~-~~~~~~~~~~~~~~g~~~~~~~~------G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g- 270 (327)
T 2xbg_A 199 HNR-TTSRRLHNMGFTPDGRLWMIVNG------GKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG- 270 (327)
T ss_dssp EEC-CSSSCEEEEEECTTSCEEEEETT------TEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT-
T ss_pred CCC-CCCCccceeEECCCCCEEEEeCC------ceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC-
Confidence 853 333344444432 5788887642 234554333 5689987532 332223344433 67888887632
Q ss_pred CceeeeEEEEECCCCeEEEcc
Q psy14726 596 VTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 596 ~~~~~~v~~yd~~~~~W~~~~ 616 (712)
.+++-.-...+|+.+.
T Consensus 271 -----~i~~S~DgG~tW~~~~ 286 (327)
T 2xbg_A 271 -----ALLCSQDGGQTWQQDV 286 (327)
T ss_dssp -----CEEEESSTTSSCEECG
T ss_pred -----eEEEeCCCCcccEEcC
Confidence 2333333457999885
No 163
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.76 E-value=0.63 Score=47.65 Aligned_cols=188 Identities=16% Similarity=0.183 Sum_probs=95.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++..++.||.+ ..+..+|..+.+....-..+...........++..++.||.+ ..+..|+.....-....
T Consensus 75 d~~~l~s~s~D-----g~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d-----~~i~v~~~~~~~~~~~~ 144 (354)
T 2pbi_B 75 DKRRIVSSSQD-----GKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD-----NKCSVYPLTFDKNENMA 144 (354)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT-----SEEEEEECCCCTTCCSG
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC-----CCEEEEEEecccccccc
Confidence 44556667654 357788877766543333332222222233467788888864 34666665433111000
Q ss_pred ----cCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE----CCEEEEEcC
Q psy14726 476 ----PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY----HECIYVIGG 545 (712)
Q Consensus 476 ----~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG 545 (712)
.+..-.....++.+ ++..++.|+.+ .++..||.++++-...- ........++.+ ++..++.|+
T Consensus 145 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D-----~~v~lwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~g~~l~sgs 217 (354)
T 2pbi_B 145 AKKKSVAMHTNYLSACSFTNSDMQILTASGD-----GTCALWDVESGQLLQSF--HGHGADVLCLDLAPSETGNTFVSGG 217 (354)
T ss_dssp GGCEEEEECSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEEE--ECCSSCEEEEEECCCSSCCEEEEEE
T ss_pred ccceeeeccCCcEEEEEEeCCCCEEEEEeCC-----CcEEEEeCCCCeEEEEE--cCCCCCeEEEEEEeCCCCCEEEEEe
Confidence 00000011122222 44455566554 46888898877643221 111111122222 356777777
Q ss_pred CCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 546 FNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 546 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
.+ ..+..||..+.+....-.. .......+.+ ++..++.||.++ .+.+||..++.-
T Consensus 218 ~D-----g~v~~wd~~~~~~~~~~~~--h~~~v~~v~~~p~~~~l~s~s~D~-----~v~lwd~~~~~~ 274 (354)
T 2pbi_B 218 CD-----KKAMVWDMRSGQCVQAFET--HESDVNSVRYYPSGDAFASGSDDA-----TCRLYDLRADRE 274 (354)
T ss_dssp TT-----SCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEE
T ss_pred CC-----CeEEEEECCCCcEEEEecC--CCCCeEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcE
Confidence 64 4688999988765433211 1111222333 677888888765 578889887653
No 164
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.75 E-value=0.38 Score=48.39 Aligned_cols=188 Identities=10% Similarity=0.013 Sum_probs=98.0
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECC-eEEEEcccCCCCCCceeEEeecCCCce-E
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHD-VIYAMGGYNGQRRQNSVEKYNYTENQW-S 472 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W-~ 472 (712)
++.+|+.++. ...+..||+.+++.......+.... .++. -++ .+|+.+... ..+++||+.+.+. .
T Consensus 9 ~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~--~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 9 SNFGIVVEQH-----LRRISFFSTDTLEILNQITLGYDFV--DTAITSDCSNVVVTSDFC-----QTLVQIETQLEPPKV 76 (331)
T ss_dssp CCEEEEEEGG-----GTEEEEEETTTCCEEEEEECCCCEE--EEEECSSSCEEEEEESTT-----CEEEEEECSSSSCEE
T ss_pred CCEEEEEecC-----CCeEEEEeCcccceeeeEEccCCcc--eEEEcCCCCEEEEEeCCC-----CeEEEEECCCCceeE
Confidence 4677887763 3579999999998865544432222 3333 345 477765422 4799999988874 2
Q ss_pred -EcccCCccccceeEEEE-C-CEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC-EEEEEcCCC
Q psy14726 473 -LIAPMNVERSDASATTL-Q-GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFN 547 (712)
Q Consensus 473 -~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~ 547 (712)
.+.....+ .++++.- + ..+| .+...+ ....+.+||..+++....-+. ....+.++.. ++ .+|+.+..+
T Consensus 77 ~~~~~~~~~--~~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~ 149 (331)
T 3u4y_A 77 VAIQEGQSS--MADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSS 149 (331)
T ss_dssp EEEEECSSC--CCCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETT
T ss_pred EecccCCCC--ccceEECCCCCEEE-EecCCC--CcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCC
Confidence 22221111 1212222 3 4566 433221 123799999998876443222 2222334433 44 588776532
Q ss_pred CCCccce-EEEEeCCCCc-EEEc--CCCCCCccceEEEEE-CC-EEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 548 GMSRMCN-GEKYNPVTKT-WSQV--PDMYNPRSNFAIEVI-DD-MIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 548 ~~~~~~~-v~~yd~~~~~-W~~~--~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
.. +..|+...+. .... ...+......+++.. ++ .+|+.+..+ ..+.+||+.+++.
T Consensus 150 -----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~-----~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 150 -----ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG-----NSIGILETQNPEN 210 (331)
T ss_dssp -----TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT-----TEEEEEECSSTTS
T ss_pred -----CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC-----CeEEEEECCCCcc
Confidence 34 6666654321 1111 001111222233333 44 477765433 3689999987765
No 165
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.74 E-value=0.34 Score=49.20 Aligned_cols=187 Identities=11% Similarity=0.046 Sum_probs=93.9
Q ss_pred eEEEEECCCCcEEEeCCCCCCcceeEEE-EECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--
Q psy14726 413 SCRCFNAVTKVWKEIAPMNFKRCYVSTA-VHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-- 489 (712)
Q Consensus 413 ~v~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 489 (712)
.+|.+|..++++..+........-..++ .-+|++|+.+... ....++.||+.+.+++.+............+.+
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~sp 95 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDE 95 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEET
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC---CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECC
Confidence 4778888888887653222111112233 3467888775421 125799999988888776553322222222222
Q ss_pred CC-EEEEEcccCCCCccCceEEeeCC-CCeeEEeCCC------CCCC----cceEEEE-ECCEEEEEcCCCCCCccceEE
Q psy14726 490 QG-KIYITGGFNGHNCLNSCEVYDPE-CNQWTLIEPM------RHRR----SGVSCIA-YHECIYVIGGFNGMSRMCNGE 556 (712)
Q Consensus 490 ~~-~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~------p~~r----~~~~~~~-~~~~iyv~GG~~~~~~~~~v~ 556 (712)
++ .+|+.+..+ ..+..||.. ++..+.+... |.+| .-+.++. -++++|+.+.. ...+.
T Consensus 96 dg~~l~~~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~-----~~~v~ 165 (347)
T 3hfq_A 96 ARQLVYSANYHK-----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG-----SDKVY 165 (347)
T ss_dssp TTTEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT-----TTEEE
T ss_pred CCCEEEEEeCCC-----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC-----CCEEE
Confidence 44 477665322 357777764 3344333211 1111 1122222 25677776543 24788
Q ss_pred EEeCC-CCcEEEcCC--CCCCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 557 KYNPV-TKTWSQVPD--MYNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 557 ~yd~~-~~~W~~~~~--~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
.||.. +.+...+.. .+....-..++.. +++ +|+.+..++ .-.++.++..++++..+
T Consensus 166 ~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~---~v~v~~~~~~~g~~~~~ 226 (347)
T 3hfq_A 166 VYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSS---QIASLKYDTQTGAFTQL 226 (347)
T ss_dssp EEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT---EEEEEEEETTTTEEEEE
T ss_pred EEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCC---EEEEEEecCCCCceEEe
Confidence 88887 565554422 1111111122322 454 777654332 11344555556776544
No 166
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.72 E-value=1 Score=51.06 Aligned_cols=244 Identities=11% Similarity=-0.049 Sum_probs=125.4
Q ss_pred CCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCC--------CccceEEEEECCCCcE--EEeC
Q psy14726 360 SPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGN--------EYYNSCRCFNAVTKVW--KEIA 428 (712)
Q Consensus 360 ~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~--------~~~~~v~~yd~~~~~W--~~~~ 428 (712)
.....+..+|..+++... ....+.... .+.+.. +++.++++..+.. .....+++++..+..- ..+.
T Consensus 144 ~~~~~i~v~dl~tg~~~~--~~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~ 220 (695)
T 2bkl_A 144 ADEAVLHVIDVDSGEWSK--VDVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH 220 (695)
T ss_dssp CSCCEEEEEETTTCCBCS--SCCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE
T ss_pred CceEEEEEEECCCCCCcC--CcccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE
Confidence 334578889988887541 111111111 233333 6666666655432 2345699999987763 2222
Q ss_pred CCCC-CcceeEEE-EECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccC
Q psy14726 429 PMNF-KRCYVSTA-VHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLN 506 (712)
Q Consensus 429 ~~~~-~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 506 (712)
..+. +....+.. .-+|+..+++..... ..+.++.+|..+..|..+..-.... ...+.-+|.+|+....+ ....
T Consensus 221 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~~~s~~~--~~~~ 295 (695)
T 2bkl_A 221 ERTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFYVLTDEG--APRQ 295 (695)
T ss_dssp CCCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEEEEECTT--CTTC
T ss_pred ecCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEEEEECCC--CCCC
Confidence 2222 22223333 335554444433221 3467888888777888775432221 22223466666654432 2246
Q ss_pred ceEEeeCCCCe---eEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE-
Q psy14726 507 SCEVYDPECNQ---WTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV- 582 (712)
Q Consensus 507 ~v~~yd~~~~~---W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~- 582 (712)
.++.+|..+.. |+.+-+-.....-..+...++++++.+..++ ...++.+|+....-..+. .+......+...
T Consensus 296 ~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s 371 (695)
T 2bkl_A 296 RVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDA---TSEVRVATLKGKPVRTVQ-LPGVGAASNLMGL 371 (695)
T ss_dssp EEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETT---EEEEEEEETTCCEEEECC-CSSSSEECCCBSC
T ss_pred EEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECC---EEEEEEEeCCCCeeEEec-CCCCeEEEEeecC
Confidence 78999987765 8877542212222333445888888775433 356888887655444442 221111011111
Q ss_pred ECCEEEEEcccCCCceeeeEEEEECCCCeEEEcc
Q psy14726 583 IDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 583 ~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 616 (712)
-++..+++...+. ..-..++.||..+++.+.+.
T Consensus 372 ~d~~~l~~~~ss~-~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 372 EDLDDAYYVFTSF-TTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp TTCSEEEEEEEET-TEEEEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEEcCC-CCCCEEEEEECCCCcEEEEe
Confidence 1333333322222 12347899999988876663
No 167
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.69 E-value=1.2 Score=46.27 Aligned_cols=187 Identities=14% Similarity=0.162 Sum_probs=94.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++..++.|+.+ ..+..||..+.+-...-.-.. ..-.+++. -++..++.|+.+ ..+..||..+.+....
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQGHE-QDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSLT 202 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEccCC-CCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCeeEEE
Confidence 66777788754 358899998876543211111 11123333 255666666643 4688899888765433
Q ss_pred ccCCccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEe-CCC----CCCCcceEEEEE--CCEEEEEc
Q psy14726 475 APMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI-EPM----RHRRSGVSCIAY--HECIYVIG 544 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~----p~~r~~~~~~~~--~~~iyv~G 544 (712)
-... .....+.+ ++++++.|+.++ .+..||..+..-... ... .........+.+ ++..++.|
T Consensus 203 ~~~~---~~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~ 274 (393)
T 1erj_A 203 LSIE---DGVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 274 (393)
T ss_dssp EECS---SCEEEEEECSTTCCEEEEEETTS-----CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE
T ss_pred EEcC---CCcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE
Confidence 2211 11222222 677888887664 588889887653322 110 001111222222 56677777
Q ss_pred CCCCCCccceEEEEeCCCCcEEEcCCCCC-C---------cc-ceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 545 GFNGMSRMCNGEKYNPVTKTWSQVPDMYN-P---------RS-NFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 545 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~---------r~-~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
+.+ ..+..||..+..-......+. . .. -.+++.. ++..++.||.++ .+.+||..+++
T Consensus 275 s~d-----~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~-----~v~iwd~~~~~ 343 (393)
T 1erj_A 275 SLD-----RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR-----GVLFWDKKSGN 343 (393)
T ss_dssp ETT-----SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTS-----EEEEEETTTCC
T ss_pred eCC-----CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCe
Confidence 754 467788876532111100000 0 00 1112222 566777777665 57889988765
No 168
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.68 E-value=0.46 Score=47.40 Aligned_cols=185 Identities=11% Similarity=0.151 Sum_probs=94.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++..++.|+.+ ..+..+|..++.-...-..............+++.++.|+.+ ..+..||..+.+-..
T Consensus 24 ~~~~l~s~~~d-----g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-----~~i~vwd~~~~~~~~-- 91 (304)
T 2ynn_A 24 TEPWVLTTLYS-----GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVV-- 91 (304)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEE--
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC-----CEEEEEECCCCcEEE--
Confidence 45666677754 358888988876432211111112222233456777777753 468889988765321
Q ss_pred cCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE---CCEEEEEcCCCCCC
Q psy14726 476 PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY---HECIYVIGGFNGMS 550 (712)
Q Consensus 476 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~ 550 (712)
.+..-.....++.+ ++.+++.|+.++ .+..||..++ |.....+........++.+ ++.+++.|+.+
T Consensus 92 ~~~~h~~~v~~~~~~~~~~~l~sgs~D~-----~v~lWd~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D--- 162 (304)
T 2ynn_A 92 DFEAHPDYIRSIAVHPTKPYVLSGSDDL-----TVKLWNWENN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD--- 162 (304)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEETTS-----CEEEEEGGGT-TEEEEEECCCCSCEEEEEECTTCTTEEEEEETT---
T ss_pred EEeCCCCcEEEEEEcCCCCEEEEECCCC-----eEEEEECCCC-cchhhhhcccCCcEEEEEECCCCCCEEEEEeCC---
Confidence 11111111122223 566777777664 5777887654 2221111111112222333 35677778765
Q ss_pred ccceEEEEeCCCCc--EEEcCCCCCCccceEEEEE----CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 551 RMCNGEKYNPVTKT--WSQVPDMYNPRSNFAIEVI----DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 551 ~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~----~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
..+..||..+.. ...... ..+ ....+.+ ++.+++.|+.++ .+.+||..+.+
T Consensus 163 --~~v~iwd~~~~~~~~~~~~~--~~~-~v~~~~~~~~~~~~~l~s~s~D~-----~i~iWd~~~~~ 219 (304)
T 2ynn_A 163 --RTVKVWSLGQSTPNFTLTTG--QER-GVNYVDYYPLPDKPYMITASDDL-----TIKIWDYQTKS 219 (304)
T ss_dssp --SEEEEEETTCSSCSEEEECC--CTT-CEEEEEECCSTTCCEEEEEETTS-----EEEEEETTTTE
T ss_pred --CeEEEEECCCCCccceeccC--CcC-cEEEEEEEEcCCCCEEEEEcCCC-----eEEEEeCCCCc
Confidence 467888876432 111111 111 1122222 456777787665 67888988765
No 169
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.68 E-value=0.52 Score=46.90 Aligned_cols=215 Identities=10% Similarity=0.009 Sum_probs=112.2
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+.++++.. ....+..||+.++........ ..-.+++.. ++.+|+.. ...+++||+.++++..
T Consensus 25 ~~l~~~d~-----~~~~i~~~d~~~~~~~~~~~~-----~~~~~i~~~~dG~l~v~~-------~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 25 NSLLFVDI-----PAKKVCRWDSFTKQVQRVTMD-----APVSSVALRQSGGYVATI-------GTKFCALNWKEQSAVV 87 (297)
T ss_dssp TEEEEEET-----TTTEEEEEETTTCCEEEEECS-----SCEEEEEEBTTSSEEEEE-------TTEEEEEETTTTEEEE
T ss_pred CEEEEEEC-----CCCEEEEEECCCCcEEEEeCC-----CceEEEEECCCCCEEEEE-------CCeEEEEECCCCcEEE
Confidence 45555543 234688999988766543211 112233333 56666543 2469999999999887
Q ss_pred eCCCCC----CcceeEEEEECCeEEEEcccCC------CCCCceeEEeecCCCceEEc-ccCCccccceeEEEE-CC-EE
Q psy14726 427 IAPMNF----KRCYVSTAVHHDVIYAMGGYNG------QRRQNSVEKYNYTENQWSLI-APMNVERSDASATTL-QG-KI 493 (712)
Q Consensus 427 ~~~~~~----~r~~~~~~~~~~~iyv~GG~~~------~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~-~~-~i 493 (712)
+...+. .+.....+.-+|++|+..-... ......++++|+.. +...+ ..+..+ .+.+.. ++ .+
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~p---ngi~~spdg~~l 163 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDIS---NGLDWSLDHKIF 163 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESBE---EEEEECTTSCEE
T ss_pred EEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccccc---cceEEcCCCCEE
Confidence 654322 2222233334678887431111 12345789998863 33332 111111 122222 34 68
Q ss_pred EEEcccCCCCccCceEEeeC--CCCeeEE---eCCCCCC-CcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEE
Q psy14726 494 YITGGFNGHNCLNSCEVYDP--ECNQWTL---IEPMRHR-RSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 494 yv~GG~~~~~~~~~v~~yd~--~~~~W~~---~~~~p~~-r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
|+.... .+.+++||. .++.... +..++.. ..-.+++.- +|.||+.... ...|.+||+++.+..
T Consensus 164 yv~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~-----~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 164 YYIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN-----GGRVIRLDPVTGKRL 233 (297)
T ss_dssp EEEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET-----TTEEEEECTTTCCEE
T ss_pred EEecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC-----CCEEEEEcCCCceEE
Confidence 887643 246788865 5555432 1122211 111233332 5789987532 146999999977655
Q ss_pred EcCCCCCCccceEEEEEC----CEEEEEcccCC
Q psy14726 567 QVPDMYNPRSNFAIEVID----DMIFAIGGFNG 595 (712)
Q Consensus 567 ~~~~~p~~r~~~~~~~~~----~~i~v~GG~~~ 595 (712)
..-.+|.. ....+.++ +.|||.....+
T Consensus 234 ~~i~~p~~--~~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 234 QTVKLPVD--KTTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp EEEECSSS--BEEEEEEESGGGCEEEEEEBCTT
T ss_pred EEEECCCC--CceEEEEeCCCCCEEEEEcCCcC
Confidence 44344432 23344443 47888765543
No 170
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.67 E-value=0.19 Score=51.06 Aligned_cols=189 Identities=13% Similarity=0.165 Sum_probs=97.2
Q ss_pred CCEEEEEeecCCCCccceEEEEECCC--CcEEEeCCCCCCcceeEEEE--ECCeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVT--KVWKEIAPMNFKRCYVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
++..++.|+.+ ..+..+|... ..+..+..+.........+. .++.+++.||.+ ..+..||..+..|
T Consensus 118 ~g~~las~s~D-----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-----~~i~iW~~~~~~~ 187 (330)
T 2hes_X 118 DGYYLATCSRD-----KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-----DTVRIWKDYDDDW 187 (330)
T ss_dssp TSCEEEEEETT-----SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCEEEEEeCC-----CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCCe
Confidence 56777777754 3578888743 23443333322222222222 256777877754 4578888887777
Q ss_pred EEcccCCccccceeEEEE--C--CEEEEEcccCCCCccCceEEeeCCC------CeeEEeCCCCC--CCcceEEEEECCE
Q psy14726 472 SLIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPEC------NQWTLIEPMRH--RRSGVSCIAYHEC 539 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~------~~W~~~~~~p~--~r~~~~~~~~~~~ 539 (712)
..+..+..-...-..+.+ + +..++.||.++ .+..||..+ ..|.....++. ...-.+++...+.
T Consensus 188 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~-----~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~ 262 (330)
T 2hes_X 188 ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS-----TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG 262 (330)
T ss_dssp EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS-----CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS
T ss_pred eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC-----eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC
Confidence 665544322111222223 2 45666776654 355555432 34665554432 2222233333445
Q ss_pred EEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCC-cc-ceEEEEE----CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 540 IYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP-RS-NFAIEVI----DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 540 iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-r~-~~~~~~~----~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
+++.||.+ ..+..||..+..|..+...... .. ....+.+ ++.+++.||.++ .+.+||.++
T Consensus 263 ~l~s~~~d-----g~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg-----~v~~W~~~~ 328 (330)
T 2hes_X 263 LIASVGAD-----GVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDG-----IVNFWSLEK 328 (330)
T ss_dssp CEEEEETT-----SCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTS-----EEEEEEC--
T ss_pred EEEEEeCC-----CEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCC-----cEEEEEecc
Confidence 66667654 4677888888888655322111 11 1222222 467888888776 567777653
No 171
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.66 E-value=1.1 Score=45.26 Aligned_cols=210 Identities=14% Similarity=0.142 Sum_probs=108.3
Q ss_pred EEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-
Q psy14726 365 VETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH- 442 (712)
Q Consensus 365 v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~- 442 (712)
++.-.-.-..|..+.... +.+-....++.. ++.+|+.|.. ..+++-+-.-.+|+.+..... ..-++++..
T Consensus 101 i~~S~DgG~tW~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~------g~v~~S~DgG~tW~~~~~~~~-~~~~~~~~~~ 172 (327)
T 2xbg_A 101 MLHTTDGGQSWSQIPLDP-KLPGSPRLIKALGNGSAEMITNV------GAIYRTKDSGKNWQALVQEAI-GVMRNLNRSP 172 (327)
T ss_dssp EEEESSTTSSCEECCCCT-TCSSCEEEEEEEETTEEEEEETT------CCEEEESSTTSSEEEEECSCC-CCEEEEEECT
T ss_pred EEEECCCCCCceECcccc-CCCCCeEEEEEECCCCEEEEeCC------ccEEEEcCCCCCCEEeecCCC-cceEEEEEcC
Confidence 433333456899864321 112223344443 6788887642 135554444668998764322 233444443
Q ss_pred CCeEEEEcccCCCCCCceeEEee-cCCCceEEcccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEeeCC-CCeeE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYN-YTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPE-CNQWT 519 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd-~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~-~~~W~ 519 (712)
++.+|++|.. ..+++-+ ....+|+.+.. +.....+.++.. ++.+|+.+.. + .+...+.. -.+|+
T Consensus 173 ~~~~~~~g~~------G~~~~S~d~gG~tW~~~~~-~~~~~~~~~~~~~~g~~~~~~~~-G-----~~~~s~~D~G~tW~ 239 (327)
T 2xbg_A 173 SGEYVAVSSR------GSFYSTWEPGQTAWEPHNR-TTSRRLHNMGFTPDGRLWMIVNG-G-----KIAFSDPDNSENWG 239 (327)
T ss_dssp TSCEEEEETT------SSEEEEECTTCSSCEEEEC-CSSSCEEEEEECTTSCEEEEETT-T-----EEEEEETTEEEEEC
T ss_pred CCcEEEEECC------CcEEEEeCCCCCceeECCC-CCCCccceeEECCCCCEEEEeCC-c-----eEEEecCCCCCeeE
Confidence 5677766531 2344443 33678998843 333333444332 6788877642 1 24444322 45798
Q ss_pred EeCC--CCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCC-CCCccceEEEEE-CCEEEEEcccC
Q psy14726 520 LIEP--MRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM-YNPRSNFAIEVI-DDMIFAIGGFN 594 (712)
Q Consensus 520 ~~~~--~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~~-~~~i~v~GG~~ 594 (712)
.+.. ++.....++++.. ++.+|++|+. ..+++-.-.-.+|+.+... +.+...+.++.. ++.++++| .+
T Consensus 240 ~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~------g~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G-~~ 312 (327)
T 2xbg_A 240 ELLSPLRRNSVGFLDLAYRTPNEVWLAGGA------GALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILG-QK 312 (327)
T ss_dssp CCBCTTSSCCSCEEEEEESSSSCEEEEEST------TCEEEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEEC-ST
T ss_pred eccCCcccCCcceEEEEecCCCEEEEEeCC------CeEEEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEc-CC
Confidence 7753 2332223333333 5789998862 2344433345789988632 223333445444 56666655 34
Q ss_pred CCceeeeEEEEEC
Q psy14726 595 GVTTIYHVECYDE 607 (712)
Q Consensus 595 ~~~~~~~v~~yd~ 607 (712)
+ .++.++.
T Consensus 313 G-----~i~~~~~ 320 (327)
T 2xbg_A 313 G-----ILLRYVT 320 (327)
T ss_dssp T-----EEEEECC
T ss_pred c-----eEEEEcC
Confidence 3 4666664
No 172
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.65 E-value=0.4 Score=55.24 Aligned_cols=187 Identities=10% Similarity=0.100 Sum_probs=98.6
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++..+++|+.+ ..+..||..+++....-.............-++..+++||.+ ..+.+||..+.+....-
T Consensus 24 ~~~~la~~~~~-----g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~ 93 (814)
T 3mkq_A 24 TEPWVLTTLYS-----GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVVDF 93 (814)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEE
Confidence 45556666643 468899988876543222222222222233466777777753 46899998887754321
Q ss_pred cCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCC-CCCcceEEEEE--CCEEEEEcCCCCCC
Q psy14726 476 PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMR-HRRSGVSCIAY--HECIYVIGGFNGMS 550 (712)
Q Consensus 476 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~--~~~iyv~GG~~~~~ 550 (712)
.. .........+ ++..++.|+.+ ..+..||..++ |.....+. ....-.+++.. ++..++.|+.+
T Consensus 94 ~~--~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d--- 162 (814)
T 3mkq_A 94 EA--HPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENN-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD--- 162 (814)
T ss_dssp EC--CSSCEEEEEECSSSSEEEEEETT-----SEEEEEEGGGT-SEEEEEEECCSSCEEEEEEETTEEEEEEEEETT---
T ss_pred ec--CCCCEEEEEEeCCCCEEEEEcCC-----CEEEEEECCCC-ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC---
Confidence 11 1111222222 56666677654 35788888765 22222111 11112223333 45677777754
Q ss_pred ccceEEEEeCCCCc--EEEcCCCCCCccceEEEEE---CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 551 RMCNGEKYNPVTKT--WSQVPDMYNPRSNFAIEVI---DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 551 ~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
..+..||..+.. +...... ......++.. ++..+++|+.++ .+.+||..+++-
T Consensus 163 --g~v~vwd~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~ 220 (814)
T 3mkq_A 163 --RTVKVWSLGQSTPNFTLTTGQ--ERGVNYVDYYPLPDKPYMITASDDL-----TIKIWDYQTKSC 220 (814)
T ss_dssp --SEEEEEETTCSSCSEEEECCC--TTCCCEEEECCSTTCCEEEEECTTS-----EEEEEETTTTEE
T ss_pred --CeEEEEECCCCcceeEEecCC--CCCEEEEEEEECCCCCEEEEEeCCC-----EEEEEECCCCcE
Confidence 468889886543 2222211 1111222222 677888887665 578888877653
No 173
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.65 E-value=0.071 Score=56.68 Aligned_cols=187 Identities=8% Similarity=0.038 Sum_probs=97.3
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCC-CcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCceE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF-KRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQWS 472 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 472 (712)
++.+++.|+.++ .|..||..++.-..+..+.. ...-.+++.. ++.+++.||.+ ..+.+||..++...
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D-----~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME-----GTTRLQDFKGNILR 200 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS-----SCEEEEETTSCEEE
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC-----CEEEEeeccCCcee
Confidence 345777887654 48888887765433322221 1122233432 56677777754 35888998887765
Q ss_pred EcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE---CCEEEEEcCCC
Q psy14726 473 LIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY---HECIYVIGGFN 547 (712)
Q Consensus 473 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~ 547 (712)
.+...........+..+ ++++++.|+.++ .+..||..... +..+.........+.+ ++.+++.|+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg-----~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDNVG-----NVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECSSS-----BEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeCCC-----cEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCc
Confidence 55333222222222222 677888887664 57788876543 2222211222233333 23467777654
Q ss_pred CCCccceEEEEeCCCCcEEEcC-CCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 548 GMSRMCNGEKYNPVTKTWSQVP-DMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
..+..||..+.+-.... ...........+.+ ++..++.||.++ .+.+||..+.
T Consensus 273 -----~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~-----~i~iwd~~~~ 328 (435)
T 4e54_B 273 -----QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS-----EIRVYSASQW 328 (435)
T ss_dssp -----SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS-----CEEEEESSSS
T ss_pred -----ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCC-----EEEEEECCCC
Confidence 34667887654321110 00000111112222 677778888765 5778887654
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.64 E-value=2.1 Score=43.02 Aligned_cols=190 Identities=12% Similarity=0.069 Sum_probs=105.5
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCC--ceEEccc-C-----Ccccc
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTEN--QWSLIAP-M-----NVERS 482 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~-~-----p~~r~ 482 (712)
..++.+|+.+++.........-..-+++++ -+|++|+.... ...+.+||+... .-..+.. . .....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCCCCCccccC
Confidence 468999998887654322111122334444 36789987642 257999998765 2222221 1 11111
Q ss_pred ceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCC-------CCCCc-ceEEEEE-C-CEEEEEcCCCCC
Q psy14726 483 DASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-------RHRRS-GVSCIAY-H-ECIYVIGGFNGM 549 (712)
Q Consensus 483 ~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-------p~~r~-~~~~~~~-~-~~iyv~GG~~~~ 549 (712)
....+.+ ++.|||..++. ...+.+||+....-..+... +.... -.+++.. + +.||+....
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~--- 216 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE--- 216 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT---
T ss_pred CCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC---
Confidence 2333333 58899998632 25689999765544444311 11111 2333433 4 899998754
Q ss_pred CccceEEEEeCCCCcEEEcC-CCCCCccceEEEEECCEEEEEcccCC--CceeeeEEEEECCCCeEEEc
Q psy14726 550 SRMCNGEKYNPVTKTWSQVP-DMYNPRSNFAIEVIDDMIFAIGGFNG--VTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 550 ~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~i~v~GG~~~--~~~~~~v~~yd~~~~~W~~~ 615 (712)
...|.+||+.+.+....- .........+++...+.+|...|... ......+.+||+.+++....
T Consensus 217 --~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~ 283 (329)
T 3fvz_A 217 --NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDV 283 (329)
T ss_dssp --TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEE
T ss_pred --CCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEE
Confidence 367999999876655432 21222223344445677777776432 11234689999888876544
No 175
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.63 E-value=0.33 Score=48.23 Aligned_cols=191 Identities=13% Similarity=0.104 Sum_probs=94.6
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEEE---CCeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAVH---HDVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
+++.++.||.+ ..+..||..+.+...+..+...... .+++.. ++.+++.|+.+ .++.+||..+.+|
T Consensus 20 ~g~~las~s~D-----~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-----~~v~iWd~~~~~~ 89 (297)
T 2pm7_B 20 YGKRMATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVMIWKEENGRW 89 (297)
T ss_dssp TSSEEEEEETT-----SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----TEEEEEEBSSSCB
T ss_pred CCCEEEEEeCC-----CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC-----CEEEEEEcCCCce
Confidence 56677777754 3477888765433222222211111 223322 26777777754 4688999988877
Q ss_pred EEcccCCccccceeEEEE--C--CEEEEEcccCCCCccCceEEeeCCCCe-eE--EeCCCCCCCcceEEEEE--------
Q psy14726 472 SLIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPECNQ-WT--LIEPMRHRRSGVSCIAY-------- 536 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~--~~~~~p~~r~~~~~~~~-------- 536 (712)
..+..+........++.+ + +.+++.|+.++ .+..||..+.. +. .+.... ..-.++...
T Consensus 90 ~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~-----~v~~wd~~~~~~~~~~~~~~h~--~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 90 SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG-----KVSVVEFKENGTTSPIIIDAHA--IGVNSASWAPATIEEDG 162 (297)
T ss_dssp CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEBCSSSCBCCEEEECCS--SCEEEEEECCCC-----
T ss_pred EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC-----cEEEEEecCCCceeeeeeeccc--CccceEeecCCcccccc
Confidence 655433221222223333 2 56777777653 46677765542 21 110000 000111111
Q ss_pred ------CCEEEEEcCCCCCCccceEEEEeCCCC--cEEEcCCCCCCccceEEEEE--C---CEEEEEcccCCCceeeeEE
Q psy14726 537 ------HECIYVIGGFNGMSRMCNGEKYNPVTK--TWSQVPDMYNPRSNFAIEVI--D---DMIFAIGGFNGVTTIYHVE 603 (712)
Q Consensus 537 ------~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~---~~i~v~GG~~~~~~~~~v~ 603 (712)
++++++.||.+ ..+..||..+. .|.....+.........+.+ + +.+++.|+.++ .+.
T Consensus 163 ~~~~~~~~~~l~sgs~D-----~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~-----~v~ 232 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR-----TCI 232 (297)
T ss_dssp -------CCEEEEEETT-----SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS-----CEE
T ss_pred cCCCCCCcceEEEEcCC-----CcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC-----cEE
Confidence 23567777764 34666666543 35544333322222233333 2 47888888765 456
Q ss_pred EEECCC--CeEE
Q psy14726 604 CYDEKT--DEWY 613 (712)
Q Consensus 604 ~yd~~~--~~W~ 613 (712)
+||+.+ ..|.
T Consensus 233 iWd~~~~~~~~~ 244 (297)
T 2pm7_B 233 IWTQDNEQGPWK 244 (297)
T ss_dssp EEEESSTTSCCE
T ss_pred EEEeCCCCCccc
Confidence 666654 3454
No 176
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.54 E-value=0.73 Score=50.45 Aligned_cols=238 Identities=9% Similarity=-0.005 Sum_probs=118.5
Q ss_pred CceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-C-CEEEEEeecCCCCccceEEEEEC--CCC
Q psy14726 347 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-G-YNIYVIGGFDGNEYYNSCRCFNA--VTK 422 (712)
Q Consensus 347 ~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~v~~yd~--~~~ 422 (712)
.+.+++.+.. ...+..+|..+++-... .+. ...-|++++. + ..+|+.+. + +.+..||+ .+.
T Consensus 148 ~~~~~vs~~~-----d~~V~v~D~~t~~~~~~--i~~--g~~~~~v~~spdg~~l~v~~~-d-----~~V~v~D~~~~t~ 212 (543)
T 1nir_A 148 PNLFSVTLRD-----AGQIALVDGDSKKIVKV--IDT--GYAVHISRMSASGRYLLVIGR-D-----ARIDMIDLWAKEP 212 (543)
T ss_dssp GGEEEEEEGG-----GTEEEEEETTTCCEEEE--EEC--STTEEEEEECTTSCEEEEEET-T-----SEEEEEETTSSSC
T ss_pred CCEEEEEEcC-----CCeEEEEECCCceEEEE--Eec--CcccceEEECCCCCEEEEECC-C-----CeEEEEECcCCCC
Confidence 4566666543 24678889888775431 111 1114555554 4 45665543 2 67999999 666
Q ss_pred cEEEeCCCCCCcceeEEEEE-----CCeEEEEcccCCCCCCceeEEeecCCCceEEcccC-----------CccccceeE
Q psy14726 423 VWKEIAPMNFKRCYVSTAVH-----HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM-----------NVERSDASA 486 (712)
Q Consensus 423 ~W~~~~~~~~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-----------p~~r~~~~~ 486 (712)
+-. ..++....-..++.. +|+..++++.. .+++.++|..+.+-...-+. |.+|....+
T Consensus 213 ~~~--~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~ 286 (543)
T 1nir_A 213 TKV--AEIKIGIEARSVESSKFKGYEDRYTIAGAYW----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAII 286 (543)
T ss_dssp EEE--EEEECCSEEEEEEECCSTTCTTTEEEEEEEE----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEE
T ss_pred cEE--EEEecCCCcceEEeCCCcCCCCCEEEEEEcc----CCeEEEEeccccccceeecccCcccCccccccCCceEEEE
Confidence 532 222233333444443 55444444321 25688889877654322111 111221111
Q ss_pred EEE-CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCE-EEEEcCCCCCCccceEEEEeCCCC
Q psy14726 487 TTL-QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HEC-IYVIGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 487 ~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~~ 563 (712)
..- ++.+|+.+.. ...+..+|..+.+-..+..++..+.-+..+.. +++ +|+.+.. .+.|.++|..++
T Consensus 287 ~s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~-----~~~v~v~D~~tg 356 (543)
T 1nir_A 287 ASHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN-----SNKVAVIDSKDR 356 (543)
T ss_dssp ECSSSSEEEEEETT-----TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG-----GTEEEEEETTTT
T ss_pred ECCCCCEEEEEECC-----CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecC-----CCeEEEEECCCC
Confidence 122 4456655432 25688888876432111111222222223322 444 6665432 367888999988
Q ss_pred cEEEc---CCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCC-----eEEEccCCC
Q psy14726 564 TWSQV---PDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTD-----EWYEATDMN 619 (712)
Q Consensus 564 ~W~~~---~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~-----~W~~~~~~p 619 (712)
+-... +..|.+..+.....- ++.+|+.+.... +.|-+||..+. .|+.+..++
T Consensus 357 ~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d----~~V~v~d~~~~~~~~~~~~~v~~l~ 417 (543)
T 1nir_A 357 RLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD----GSISLIGTDPKNHPQYAWKKVAELQ 417 (543)
T ss_dssp EEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS----SEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred eEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCC----ceEEEEEeCCCCCchhcCeEEEEEE
Confidence 65443 233333223322211 377888764322 25778887762 377664443
No 177
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.53 E-value=0.87 Score=44.92 Aligned_cols=188 Identities=9% Similarity=0.077 Sum_probs=90.7
Q ss_pred ECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc-eEE
Q psy14726 395 IGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ-WSL 473 (712)
Q Consensus 395 ~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~ 473 (712)
.++..++.|+.+ ..+..||..++.-...-..............++..++.|+.+ ..+..||..... ...
T Consensus 27 ~~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~~~~~~~~~~~ 96 (313)
T 3odt_A 27 VDDSKVASVSRD-----GTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD-----TMINGVPLFATSGEDP 96 (313)
T ss_dssp EETTEEEEEETT-----SEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTCCTTSCC
T ss_pred cCCCEEEEEEcC-----CcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC-----CeEEEEEeeecCCCCc
Confidence 345556677643 358888887766443322222222222223466777777754 346666654431 122
Q ss_pred cccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccc
Q psy14726 474 IAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMC 553 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 553 (712)
+..+............++..++.|+.++ .+..||.......... ...+.........++..++.|+.+ .
T Consensus 97 ~~~~~~~~~~i~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d-----~ 165 (313)
T 3odt_A 97 LYTLIGHQGNVCSLSFQDGVVISGSWDK-----TAKVWKEGSLVYNLQA-HNASVWDAKVVSFSENKFLTASAD-----K 165 (313)
T ss_dssp -CEECCCSSCEEEEEEETTEEEEEETTS-----EEEEEETTEEEEEEEC-CSSCEEEEEEEETTTTEEEEEETT-----S
T ss_pred ccchhhcccCEEEEEecCCEEEEEeCCC-----CEEEEcCCcEEEeccc-CCCceeEEEEccCCCCEEEEEECC-----C
Confidence 2222222222333444666777777653 5777883332222221 111111111222256666677654 4
Q ss_pred eEEEEeCCCCcEEEcCCCCCCccceEEEE-ECCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 554 NGEKYNPVTKTWSQVPDMYNPRSNFAIEV-IDDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 554 ~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
.+..||.....- .+... ....-.+++. -++. ++.|+.++ .+.+||..+.+
T Consensus 166 ~i~i~d~~~~~~-~~~~~-~~~~i~~~~~~~~~~-~~~~~~dg-----~i~i~d~~~~~ 216 (313)
T 3odt_A 166 TIKLWQNDKVIK-TFSGI-HNDVVRHLAVVDDGH-FISCSNDG-----LIKLVDMHTGD 216 (313)
T ss_dssp CEEEEETTEEEE-EECSS-CSSCEEEEEEEETTE-EEEEETTS-----EEEEEETTTCC
T ss_pred CEEEEecCceEE-EEecc-CcccEEEEEEcCCCe-EEEccCCC-----eEEEEECCchh
Confidence 677888432222 22111 1112222333 3667 77777655 57888887654
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.51 E-value=0.96 Score=44.64 Aligned_cols=222 Identities=7% Similarity=-0.044 Sum_probs=116.4
Q ss_pred EEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeC
Q psy14726 350 LFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA 428 (712)
Q Consensus 350 i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 428 (712)
+++++.. ...+..||+.++ ...+.. + ...-.++++. ++.+|+.... ...+++||+.+++...+.
T Consensus 42 l~~~~~~-----~~~i~~~~~~~~-~~~~~~---~-~~~~~~l~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 42 VIFSDVR-----QNRTWAWSDDGQ-LSPEMH---P-SHHQNGHCLNKQGHLIACSHG-----LRRLERQREPGGEWESIA 106 (296)
T ss_dssp EEEEEGG-----GTEEEEEETTSC-EEEEES---S-CSSEEEEEECTTCCEEEEETT-----TTEEEEECSTTCCEEEEE
T ss_pred EEEEeCC-----CCEEEEEECCCC-eEEEEC---C-CCCcceeeECCCCcEEEEecC-----CCeEEEEcCCCCcEEEEe
Confidence 5665542 236889999887 554322 1 1222344443 6777766431 246899999888887653
Q ss_pred CCCC----CcceeEEEEECCeEEEE----cccC--------CCCCCceeEEeecCCCceEEcccCCccccceeEEEE--C
Q psy14726 429 PMNF----KRCYVSTAVHHDVIYAM----GGYN--------GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--Q 490 (712)
Q Consensus 429 ~~~~----~r~~~~~~~~~~~iyv~----GG~~--------~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 490 (712)
.... .+....+..-+|++|+. |... .......++++|+. .+...+... ........+ +
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~---~~~~~gi~~s~d 182 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD---RVKPNGLAFLPS 182 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC---CSSEEEEEECTT
T ss_pred eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC---CCCCccEEECCC
Confidence 3211 11222333347889986 4321 01123579999987 555444221 111122333 5
Q ss_pred CEEEEEcccCCCCccCceEEeeCC-CCee-EE--eCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEE
Q psy14726 491 GKIYITGGFNGHNCLNSCEVYDPE-CNQW-TL--IEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 491 ~~iyv~GG~~~~~~~~~v~~yd~~-~~~W-~~--~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
+++++.+..+ ..+++||.. +++. .. +-.........-+.--+|.||+..+ ..|.+||+......
T Consensus 183 g~~lv~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~-------~~v~~~~~~g~~~~ 250 (296)
T 3e5z_A 183 GNLLVSDTGD-----NATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASAG-------DGVHVLTPDGDELG 250 (296)
T ss_dssp SCEEEEETTT-----TEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEET-------TEEEEECTTSCEEE
T ss_pred CCEEEEeCCC-----CeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEcC-------CeEEEECCCCCEEE
Confidence 6666544322 468888876 4544 11 1111111111112223678998872 57899999865554
Q ss_pred EcCCCCCCccceEEEEE--C-CEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 567 QVPDMYNPRSNFAIEVI--D-DMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 567 ~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
.+.. +.. -.+++.- + +.||+... ..++.|++++++-
T Consensus 251 ~~~~-~~~--~~~~~f~~~d~~~L~v~t~-------~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 251 RVLT-PQT--TSNLCFGGPEGRTLYMTVS-------TEFWSIETNVRGL 289 (296)
T ss_dssp EEEC-SSC--CCEEEEESTTSCEEEEEET-------TEEEEEECSCCBC
T ss_pred EEEC-CCC--ceeEEEECCCCCEEEEEcC-------CeEEEEEcccccc
Confidence 4432 222 1222221 2 35666532 2589999887653
No 179
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.49 E-value=0.3 Score=50.91 Aligned_cols=147 Identities=9% Similarity=0.068 Sum_probs=76.0
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCC-----CcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeecCCC
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF-----KRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNYTEN 469 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~-----~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~ 469 (712)
+.+++.|+.+ ..+..||..+.+....-..+. ...-.+++.. ++ .+++.|+.++. ...+..||..+.
T Consensus 178 ~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~ 250 (416)
T 2pm9_A 178 AHVFASAGSS-----NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDLRNA 250 (416)
T ss_dssp TTEEEEESSS-----SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEETTST
T ss_pred CcEEEEEcCC-----CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeCCCC
Confidence 5677777754 358999998877644333321 1222233333 23 57777765421 136888888775
Q ss_pred ceEEcccCC-ccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEe-CCCCCCCcceEEEEE-CC-EEEE
Q psy14726 470 QWSLIAPMN-VERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI-EPMRHRRSGVSCIAY-HE-CIYV 542 (712)
Q Consensus 470 ~W~~~~~~p-~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~-~~-~iyv 542 (712)
.- .+..+. ........+.+ ++.+++.|+.++ .+..||..+.+-... .....+ . .+++.. ++ .+++
T Consensus 251 ~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg-----~v~~wd~~~~~~~~~~~~~~~~-v-~~~~~s~~~~~~l~ 322 (416)
T 2pm9_A 251 NT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN-----TVLLWNPESAEQLSQFPARGNW-C-FKTKFAPEAPDLFA 322 (416)
T ss_dssp TS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS-----EEEEECSSSCCEEEEEECSSSC-C-CCEEECTTCTTEEE
T ss_pred CC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCCC-----CEEEeeCCCCccceeecCCCCc-e-EEEEECCCCCCEEE
Confidence 31 111121 11112223333 577888887653 588888877653222 111111 1 122222 34 6777
Q ss_pred EcCCCCCCccceEEEEeCCCC
Q psy14726 543 IGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 543 ~GG~~~~~~~~~v~~yd~~~~ 563 (712)
.|+.+ ..+..||..+.
T Consensus 323 s~~~d-----~~i~iw~~~~~ 338 (416)
T 2pm9_A 323 CASFD-----NKIEVQTLQNL 338 (416)
T ss_dssp ECCSS-----SEEEEEESCCC
T ss_pred EEecC-----CcEEEEEccCC
Confidence 77754 45667776543
No 180
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=95.48 E-value=0.35 Score=50.38 Aligned_cols=195 Identities=9% Similarity=0.004 Sum_probs=96.2
Q ss_pred EEEEEeecCCCCccceEEEEECCCCcEEEeCC-CCCCcceeEEEEE-CCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 398 NIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAP-MNFKRCYVSTAVH-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 398 ~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
.+++.|+.+ ..+..||..+++....-. ......-.+++.. ++..++.|+.+ ..+.+||+.+.+-...-
T Consensus 145 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~ 214 (402)
T 2aq5_A 145 NVLLSAGCD-----NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEK 214 (402)
T ss_dssp TEEEEEETT-----SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEE
T ss_pred CEEEEEcCC-----CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeee
Confidence 577777754 358999999887643321 1111222233332 56777777743 46999999887643221
Q ss_pred -cCCccc-cceeEEEECCEEEEEcccCCCCccCceEEeeCCCCee-EEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCC
Q psy14726 476 -PMNVER-SDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQW-TLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMS 550 (712)
Q Consensus 476 -~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 550 (712)
...... ....+..-++++++.|.... .-..+..||..+..- .....+.....-..++.. +..+++.|+.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~l~~g~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~d--- 289 (402)
T 2aq5_A 215 DRPHEGTRPVHAVFVSEGKILTTGFSRM--SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGD--- 289 (402)
T ss_dssp ECSSCSSSCCEEEECSTTEEEEEEECTT--CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTC---
T ss_pred ccCCCCCcceEEEEcCCCcEEEEeccCC--CCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCC---
Confidence 111111 12222222778777773111 124688888876442 111111222222223322 34566777543
Q ss_pred ccceEEEEeCCCCc--EEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 551 RMCNGEKYNPVTKT--WSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 551 ~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
..+..||..+.+ ...+........-.+++...+..+++++. ..+.+|+..++....+
T Consensus 290 --g~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~------~~~~~~~l~~~~~~~i 348 (402)
T 2aq5_A 290 --SSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKC------EIARFYKLHERKCEPI 348 (402)
T ss_dssp --SCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGT------EEEEEEEEETTEEEEE
T ss_pred --CeEEEEEecCCCcceEeecccccCCcccceEEecccccceecc------eeEEEEEcCCCcEEEE
Confidence 467888887765 44443322111222333333322233221 2566777666665443
No 181
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.46 E-value=0.22 Score=50.15 Aligned_cols=189 Identities=13% Similarity=0.104 Sum_probs=97.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEEE---CCeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAVH---HDVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
++..++.|+.+ ..+..||..+++...+..+...... .+++.. ++.+++.|+.+ ..+..||+.+.+|
T Consensus 24 ~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D-----~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 24 YGTRLATCSSD-----RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD-----RKVIIWREENGTW 93 (316)
T ss_dssp GGCEEEEEETT-----TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT-----SCEEEECCSSSCC
T ss_pred CCCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC-----CEEEEEECCCCcc
Confidence 45666777753 3578888877654333222211112 223332 26677777754 4588899988877
Q ss_pred EEcccCCccccceeEEEE--C--CEEEEEcccCCCCccCceEEeeCCCC-eeEEeCCCCCCCcceEEEEE----------
Q psy14726 472 SLIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPECN-QWTLIEPMRHRRSGVSCIAY---------- 536 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~~---------- 536 (712)
..+..+........++.+ + +.+++.|+.++ .+..||..+. .|.....+.........+..
T Consensus 94 ~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 168 (316)
T 3bg1_A 94 EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 (316)
T ss_dssp CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC----
T ss_pred eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccc
Confidence 655433221222223333 3 56777787664 4667776654 46543322111111001111
Q ss_pred ---------CCEEEEEcCCCCCCccceEEEEeCC-CCcEEEcCCCCCCccceEEEEE--C----CEEEEEcccCCCceee
Q psy14726 537 ---------HECIYVIGGFNGMSRMCNGEKYNPV-TKTWSQVPDMYNPRSNFAIEVI--D----DMIFAIGGFNGVTTIY 600 (712)
Q Consensus 537 ---------~~~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p~~r~~~~~~~~--~----~~i~v~GG~~~~~~~~ 600 (712)
.++.++.||.+ ..+..||.. ...|..+..+.........+.+ + +.+++.|+.++
T Consensus 169 ~~~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~----- 238 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGGCD-----NLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG----- 238 (316)
T ss_dssp --CCSCCCCCCCBEECCBTT-----SBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC-----
T ss_pred ccccccCccccceEEEecCC-----CeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCC-----
Confidence 12466666654 345566665 3457666544332222223333 2 26778888765
Q ss_pred eEEEEECCC
Q psy14726 601 HVECYDEKT 609 (712)
Q Consensus 601 ~v~~yd~~~ 609 (712)
.+.+||..+
T Consensus 239 ~v~iw~~~~ 247 (316)
T 3bg1_A 239 RVFIWTCDD 247 (316)
T ss_dssp EEEEEECSS
T ss_pred eEEEEEccC
Confidence 577787765
No 182
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.46 E-value=0.6 Score=48.52 Aligned_cols=237 Identities=9% Similarity=0.035 Sum_probs=116.2
Q ss_pred EEEEeecCCC-----CCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCC--
Q psy14726 350 LFAIGGWSGG-----SPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVT-- 421 (712)
Q Consensus 350 i~~~GG~~~~-----~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~-- 421 (712)
+++.|...+. .....+..||..++.-... .........-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 27 ~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~v~vw~~~~~~ 100 (416)
T 2pm9_A 27 LLVSGTVSGTVDANFSTDSSLELWSLLAADSEKP-IASLQVDSKFNDLDWSHNNKIIAGALDN-----GSLELYSTNEAN 100 (416)
T ss_dssp EEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSC-SCCCCCSSCEEEEEECSSSSCEEEEESS-----SCEEEECCSSTT
T ss_pred EEEEEecCcccccccCCCCeEEEEEccCCCCCcE-EEEEecCCceEEEEECCCCCeEEEEccC-----CeEEEeeccccc
Confidence 6666643321 1233577888776542110 1111111222233333 56667777653 3578888876
Q ss_pred --C-cEEEeCCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCc------eE-EcccCCccccceeEEEE
Q psy14726 422 --K-VWKEIAPMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQ------WS-LIAPMNVERSDASATTL 489 (712)
Q Consensus 422 --~-~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~------W~-~~~~~p~~r~~~~~~~~ 489 (712)
. .-..+..-. ..-.+++.. ++.+++.|+.+ ..+..||..+.+ -. .+............+.+
T Consensus 101 ~~~~~~~~~~~h~--~~v~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 173 (416)
T 2pm9_A 101 NAINSMARFSNHS--SSVKTVKFNAKQDNVLASGGNN-----GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAW 173 (416)
T ss_dssp SCCCEEEECCCSS--SCCCEEEECSSSTTBEEEECSS-----SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEE
T ss_pred ccccchhhccCCc--cceEEEEEcCCCCCEEEEEcCC-----CeEEEEECCCCccccccccccccccccCCCCCeeEEEe
Confidence 1 222222111 111223332 26777777754 458888887765 11 11111111111222333
Q ss_pred --C-CEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCC-----CCcceEEEEE-CC-EEEEEcCCCCCCccceEEEEe
Q psy14726 490 --Q-GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRH-----RRSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYN 559 (712)
Q Consensus 490 --~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-----~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd 559 (712)
+ +.+++.|+.++ .+..||..+.+....-..+. ...-.+++.. ++ .+++.|+.++. ...+..||
T Consensus 174 ~~~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d 246 (416)
T 2pm9_A 174 NQSLAHVFASAGSSN-----FASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWD 246 (416)
T ss_dssp CSSCTTEEEEESSSS-----CEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEE
T ss_pred CCCCCcEEEEEcCCC-----CEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEe
Confidence 3 57888887653 58899998876544333221 1122222323 23 57777765421 12677888
Q ss_pred CCCCcEEEcCCCC-CCccceEEEEE---CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 560 PVTKTWSQVPDMY-NPRSNFAIEVI---DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 560 ~~~~~W~~~~~~p-~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
..+.. ..+..+. ........+.+ ++.+++.|+.++ .+.+||+.+.+-
T Consensus 247 ~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg-----~v~~wd~~~~~~ 297 (416)
T 2pm9_A 247 LRNAN-TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN-----TVLLWNPESAEQ 297 (416)
T ss_dssp TTSTT-SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS-----EEEEECSSSCCE
T ss_pred CCCCC-CCcEEeecCccCceeEEEeCCCCCCeEEEEeCCC-----CEEEeeCCCCcc
Confidence 87643 1111222 11122222333 677888888765 578888877643
No 183
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.44 E-value=0.22 Score=51.23 Aligned_cols=193 Identities=16% Similarity=0.122 Sum_probs=90.3
Q ss_pred CCEEEEEeecCCCCc-cceEEEEECCCCcEEEeCCC--CCCcc-eeEEEEE-CCeEEEEcccCCCCCCceeEEeecCCCc
Q psy14726 396 GYNIYVIGGFDGNEY-YNSCRCFNAVTKVWKEIAPM--NFKRC-YVSTAVH-HDVIYAMGGYNGQRRQNSVEKYNYTENQ 470 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~-~~~v~~yd~~~~~W~~~~~~--~~~r~-~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 470 (712)
++.+++.|+.+.... -..++.|+..+..-...... ..... -.+++.. +++++ .|+.+ ..+.+||..+++
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~d-----g~v~lWd~~~~~ 126 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDS-----GAVELWEILEKE 126 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEETT-----SCEEEC------
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEECC-----CEEEEeeccccc
Confidence 788888887543222 24577777655431110000 00111 1223333 45554 45433 358888887765
Q ss_pred eEEcccCCc-cccc-eeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--C-CEEEEE
Q psy14726 471 WSLIAPMNV-ERSD-ASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--H-ECIYVI 543 (712)
Q Consensus 471 W~~~~~~p~-~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~-~~iyv~ 543 (712)
-........ +... -.++.+ +++.++.|+.++ .+..||..+++-... +........++.+ + +.+++.
T Consensus 127 ~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg-----~v~iwd~~~~~~~~~--~~~h~~~v~~v~~s~~~~~~~~s 199 (357)
T 4g56_B 127 SLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF-----SVKVWDLSQKAVLKS--YNAHSSEVNCVAACPGKDTIFLS 199 (357)
T ss_dssp --CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS-----CEEEEETTTTEEEEE--ECCCSSCEEEEEECTTCSSCEEE
T ss_pred eeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCcEEEE--EcCCCCCEEEEEEccCCCceeee
Confidence 332211111 1111 122222 677788887664 588899888764332 2211122222222 2 347777
Q ss_pred cCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE---CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 544 GGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI---DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 544 GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
||.+ ..+..||..+.+-...............+.+ ++.+++.|+.++ .+.+||+.+.+
T Consensus 200 ~~~d-----g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~-----~i~~wd~~~~~ 260 (357)
T 4g56_B 200 CGED-----GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG-----NVSLVNIKNPD 260 (357)
T ss_dssp EETT-----SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS-----CEEEEESSCGG
T ss_pred eccC-----CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc-----ceeEEECCCCc
Confidence 7754 4577888877653332222222222233333 466888887655 57788877643
No 184
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.42 E-value=0.37 Score=54.97 Aligned_cols=250 Identities=6% Similarity=-0.089 Sum_probs=125.5
Q ss_pred CceEEEEeec-CCCCCCceEEEEECCCCcEEEcccCCCCCC--------------Cc-------ceEEEEE-CCEEEEEe
Q psy14726 347 HEILFAIGGW-SGGSPTDFVETYDTRADRWVKIEQVDPMGP--------------RA-------YHGTAVI-GYNIYVIG 403 (712)
Q Consensus 347 ~~~i~~~GG~-~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~--------------r~-------~~~~~~~-~~~lyv~G 403 (712)
.+..+++++. ..+.....++.+|..+++...+.......+ |. -.+.+.. +++.++++
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 126 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFP 126 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEE
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEE
Confidence 3444555554 332333478999999888765432111000 00 1222222 55555555
Q ss_pred ecCCCCccceEEEEECCCC---cEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCcc
Q psy14726 404 GFDGNEYYNSCRCFNAVTK---VWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE 480 (712)
Q Consensus 404 G~~~~~~~~~v~~yd~~~~---~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 480 (712)
+. ..++.+|..++ .-..+.... .........-+|+..+++.. ..++++|..+.+...+......
T Consensus 127 ~~------~~i~~~d~~~~~~~~~~~l~~~~-~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 127 LG------GELYLYDLKQEGKAAVRQLTHGE-GFATDAKLSPKGGFVSFIRG------RNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ET------TEEEEEESSSCSTTSCCBCCCSS-SCEEEEEECTTSSEEEEEET------TEEEEEETTTTEEEECCCCCCS
T ss_pred eC------CcEEEEECCCCCcceEEEcccCC-cccccccCCCCCCEEEEEeC------CcEEEEecCCCCEEEeccCCcc
Confidence 53 67999999887 544443321 11222223346665555532 3799999998877666432211
Q ss_pred cc--------------ceeEEEE--CCEEEEEcccCCC----------------------------CccCceEEeeCCC-
Q psy14726 481 RS--------------DASATTL--QGKIYITGGFNGH----------------------------NCLNSCEVYDPEC- 515 (712)
Q Consensus 481 r~--------------~~~~~~~--~~~iyv~GG~~~~----------------------------~~~~~v~~yd~~~- 515 (712)
.. ......+ +|+.++++..++. .....++.+|..+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 00 0112222 5554444433221 1123788889888
Q ss_pred CeeEEeCCC-CCCCc-ceEEEEECCE-EEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCc---cceEEEE-ECCEEE
Q psy14726 516 NQWTLIEPM-RHRRS-GVSCIAYHEC-IYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPR---SNFAIEV-IDDMIF 588 (712)
Q Consensus 516 ~~W~~~~~~-p~~r~-~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r---~~~~~~~-~~~~i~ 588 (712)
.+-..+... ..... ..... -+++ |++... +.......++.+|+.+.+...+....... .....+. -+++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~-~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 351 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQ-SRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSIL 351 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEE-EETTEEEEEEE-ETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEE
T ss_pred CceEEecCCCCcceEEEEEEe-CCCCEEEEEEe-cccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEE
Confidence 765555422 11111 11222 4444 544432 22233468999999998876653211110 0011222 267777
Q ss_pred EEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 589 AIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 589 v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
+.++.++. ..+|.+|.... +..+
T Consensus 352 ~~~~~~g~---~~l~~~~~~~~-~~~l 374 (741)
T 2ecf_A 352 WSSERTGF---QHLYRIDSKGK-AAAL 374 (741)
T ss_dssp EEECTTSS---CEEEEECSSSC-EEES
T ss_pred EEecCCCc---cEEEEEcCCCC-eeee
Confidence 76665442 46888887666 5555
No 185
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.42 E-value=1.1 Score=49.43 Aligned_cols=230 Identities=10% Similarity=0.010 Sum_probs=114.3
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCC----cE-EEcccCCCCCCCc-ceEEEEE---CCEEEEEeecCCCCccceEEEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRAD----RW-VKIEQVDPMGPRA-YHGTAVI---GYNIYVIGGFDGNEYYNSCRCFN 418 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~----~W-~~~~~~~~~~~r~-~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd 418 (712)
+..+++|+ ...+..||..+. +- ..+. .. ... -.+++.. ++.+++.|+.+ ..+..||
T Consensus 30 g~~l~~~~------~~~v~v~~~~~~~~~~~~~~~~~---~h-~~~~v~~~~~sp~~~~~~l~s~~~d-----g~v~vw~ 94 (615)
T 1pgu_A 30 TNAIAYPC------GKSAFVRCLDDGDSKVPPVVQFT---GH-GSSVVTTVKFSPIKGSQYLCSGDES-----GKVIVWG 94 (615)
T ss_dssp TTEEEEEE------TTEEEEEECCSSCCSSCSEEEEC---TT-TTSCEEEEEECSSTTCCEEEEEETT-----SEEEEEE
T ss_pred CCEEEEec------CCeEEEEECCCCCCccccceEEe---cC-CCceEEEEEECcCCCCCEEEEecCC-----CEEEEEe
Confidence 44555555 136888888765 32 2211 11 111 2233333 45677777753 3577888
Q ss_pred CCCC------cEEEeCCCCCC-cceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE-
Q psy14726 419 AVTK------VWKEIAPMNFK-RCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL- 489 (712)
Q Consensus 419 ~~~~------~W~~~~~~~~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 489 (712)
..++ ....+..+... ..-.+++. -+++.++.||.+. .....++.||.. + .+..+........++.+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-~~~~~v~~~d~~--~--~~~~~~~~~~~v~~~~~~ 169 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR-DNFGVFISWDSG--N--SLGEVSGHSQRINACHLK 169 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCS-SCSEEEEETTTC--C--EEEECCSCSSCEEEEEEC
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCC-CCccEEEEEECC--C--cceeeecCCccEEEEEEC
Confidence 7654 33332222211 11222222 3566666666432 224567888732 2 12222211122222333
Q ss_pred -CCE-EEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCc---ceEEEEE--C-CEEEEEcCCCCCCccceEEEEeCC
Q psy14726 490 -QGK-IYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRS---GVSCIAY--H-ECIYVIGGFNGMSRMCNGEKYNPV 561 (712)
Q Consensus 490 -~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~---~~~~~~~--~-~~iyv~GG~~~~~~~~~v~~yd~~ 561 (712)
++. +++.|+.+ ..+..||..+.+-... +..... ....+.+ + +..++.|+.+ ..+..||..
T Consensus 170 ~~~~~~l~~~~~d-----~~v~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~ 237 (615)
T 1pgu_A 170 QSRPMRSMTVGDD-----GSVVFYQGPPFKFSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSD-----RKISCFDGK 237 (615)
T ss_dssp SSSSCEEEEEETT-----TEEEEEETTTBEEEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETT-----CCEEEEETT
T ss_pred CCCCcEEEEEeCC-----CcEEEEeCCCcceeee--ecccCCCCceEEEEEECCCCCCEEEEEeCC-----CeEEEEECC
Confidence 343 67777655 4688888776653322 221111 2222222 4 6677777654 468899988
Q ss_pred CCcEEEcC-CC--CCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEE
Q psy14726 562 TKTWSQVP-DM--YNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 562 ~~~W~~~~-~~--p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 614 (712)
+.+....- .. .....-.+++..++..++.|+.++ .+.+||..+.+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 238 SGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADA-----TIRVWDVTTSKCVQ 288 (615)
T ss_dssp TCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTS-----EEEEEETTTTEEEE
T ss_pred CCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCC-----cEEEEECCCCcEEE
Confidence 77654432 10 111111222222777888888664 57889988776543
No 186
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.39 E-value=0.25 Score=50.64 Aligned_cols=151 Identities=15% Similarity=0.153 Sum_probs=78.2
Q ss_pred EEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCC-cccc-ceeEEEE--CCEEEEEcccCCCCccCceEEeeCC
Q psy14726 439 TAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMN-VERS-DASATTL--QGKIYITGGFNGHNCLNSCEVYDPE 514 (712)
Q Consensus 439 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~-~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 514 (712)
++...+.-++.|+.+ ..|..||..+++-....... .+.. .-.++.+ +++.++.|+.++ .+.++|..
T Consensus 88 ~~~s~d~~l~~~s~d-----g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~-----~i~iwd~~ 157 (344)
T 4gqb_B 88 LTWVGERGILVASDS-----GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI-----CIKVWDLA 157 (344)
T ss_dssp EEEETTTEEEEEETT-----SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETT
T ss_pred EEEeCCCeEEEEECC-----CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC-----eEEEEECC
Confidence 344454445566543 46888998876532221111 1111 1122223 677888887664 58889988
Q ss_pred CCeeEEeCCCCCCCcceEEEEE--C-CEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE---CCEEE
Q psy14726 515 CNQWTLIEPMRHRRSGVSCIAY--H-ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI---DDMIF 588 (712)
Q Consensus 515 ~~~W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~ 588 (712)
+++-... +.........+.+ + ..+++.|+.+ ..+..||..+.+-...-...........+.+ ++.++
T Consensus 158 ~~~~~~~--~~~h~~~V~~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l 230 (344)
T 4gqb_B 158 QQVVLSS--YRAHAAQVTCVAASPHKDSVFLSCSED-----NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVF 230 (344)
T ss_dssp TTEEEEE--ECCCSSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEE
T ss_pred CCcEEEE--EcCcCCceEEEEecCCCCCceeeeccc-----cccccccccccceeeeeecceeeccceeeeecCCCCcce
Confidence 8753222 2211122222222 3 3577777765 4678899887654332211111111222222 56788
Q ss_pred EEcccCCCceeeeEEEEECCCCe
Q psy14726 589 AIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 589 v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
+.|+.++ .+.+||..+++
T Consensus 231 ~sg~~dg-----~v~~wd~~~~~ 248 (344)
T 4gqb_B 231 VFGDENG-----TVSLVDTKSTS 248 (344)
T ss_dssp EEEETTS-----EEEEEESCC--
T ss_pred EEeccCC-----cEEEEECCCCc
Confidence 8888765 57888887653
No 187
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=95.36 E-value=0.0068 Score=51.67 Aligned_cols=86 Identities=15% Similarity=0.265 Sum_probs=63.0
Q ss_pred cEEEEecCCcEEeceeeeecccCHHHHHhhcCC----CCcCCccceEEcCCCCHHHHHHHhhhhccCceecChh-hHHHH
Q psy14726 94 DATIVLADNSHFPIHRNILCACSDYFRALFTTS----LHDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITED-NVASL 168 (712)
Q Consensus 94 Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~----~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~i~~~-~~~~l 168 (712)
=|+|.| +|+.|..-+..|..... .||... ...... .++.| |=++..|+.||+|+-+|++.+..+ .+..+
T Consensus 14 ~V~LNV-GG~~F~t~~~TL~~~p~---S~L~~~~~~~~~~~~~-g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l 87 (124)
T 1s1g_A 14 LIVLNV-SGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDT-KEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAY 87 (124)
T ss_dssp EEEEEE-TTEEEEEEHHHHTTSTT---SSTTSSGGGGTBCSSS-CSEEE-CSCHHHHHHHHHHHHHSCBCCCTTSCHHHH
T ss_pred EEEEEe-CCEEEEEeHHHHhcCCC---ceecccCCcccccCCC-CcEEE-cCChHHHHHHHHHHhcCCCCCCCCcCHHHH
Confidence 378888 99999999999976532 233321 111223 55666 469999999999999999987654 47889
Q ss_pred HHHhhhcChHHHH-HHHH
Q psy14726 169 LLATDFFCMSKAQ-DLCC 185 (712)
Q Consensus 169 l~~A~~~~i~~L~-~~c~ 185 (712)
++-|++|+|+.+. +.|+
T Consensus 88 ~~Ea~fy~i~~l~l~~cC 105 (124)
T 1s1g_A 88 DDELAFYGILPEIIGDCC 105 (124)
T ss_dssp HHHHHHTTCCGGGBCHHH
T ss_pred HHHHHHcCCChHHHHHHH
Confidence 9999999998873 4443
No 188
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.36 E-value=0.75 Score=46.95 Aligned_cols=113 Identities=12% Similarity=0.097 Sum_probs=56.2
Q ss_pred EEEEEeecCCCC-ccceEEEEECCCCcEEEeCCCCCCcceeEEEEECC-eEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 398 NIYVIGGFDGNE-YYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 398 ~lyv~GG~~~~~-~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
..+++|.+.... ..-.+|.+|+.++++..+.........+.+..-++ .||+.+........-.+|.+|..+.+.+.+.
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~ 93 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN 93 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee
Confidence 344567664322 12235667888888876654422222222233345 4666654321111223455566667777776
Q ss_pred cCCccccceeEEEECCE-EEEEcccCCCCccCceEEeeCCC
Q psy14726 476 PMNVERSDASATTLQGK-IYITGGFNGHNCLNSCEVYDPEC 515 (712)
Q Consensus 476 ~~p~~r~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~~ 515 (712)
..+...........+++ +|+.+..+ ..+..|+..+
T Consensus 94 ~~~~~~~~p~~~~~dg~~l~~~~~~~-----~~v~~~~~~~ 129 (361)
T 3scy_A 94 TQKTMGADPCYLTTNGKNIVTANYSG-----GSITVFPIGQ 129 (361)
T ss_dssp EEECSSSCEEEEEECSSEEEEEETTT-----TEEEEEEBCT
T ss_pred EeccCCCCcEEEEECCCEEEEEECCC-----CEEEEEEeCC
Confidence 55433333333333554 66654322 4577777654
No 189
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.34 E-value=1.7 Score=43.52 Aligned_cols=226 Identities=10% Similarity=0.051 Sum_probs=118.4
Q ss_pred ceEEEEECCCCcEEEcccCCCC----------------CCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPM----------------GPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVW 424 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~----------------~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 424 (712)
..+..||+..+.+..+...... ....-+++++. ++.|||.... ..+.++|+.++..
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~ 113 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY------YHLSVVGSEGGHA 113 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT------TEEEEECTTCEEC
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC------CCEEEEeCCCCEE
Confidence 4688899888776653211100 00123566666 5789887431 2488999887766
Q ss_pred EEeCCCCCC---cceeEEEE-E-CCeEEEEcccCC------------CCCCceeEEeecCCCceEEccc-CCccccceeE
Q psy14726 425 KEIAPMNFK---RCYVSTAV-H-HDVIYAMGGYNG------------QRRQNSVEKYNYTENQWSLIAP-MNVERSDASA 486 (712)
Q Consensus 425 ~~~~~~~~~---r~~~~~~~-~-~~~iyv~GG~~~------------~~~~~~v~~yd~~~~~W~~~~~-~p~~r~~~~~ 486 (712)
+.+...... ..-..+++ - +|.||+.-.... ......+++||+.+.+...+.. +.. ..+.
T Consensus 114 ~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~---p~gi 190 (322)
T 2fp8_A 114 TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHV---PGGA 190 (322)
T ss_dssp EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESC---CCEE
T ss_pred EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCcc---Ccce
Confidence 554322111 12233444 3 578998632110 0123579999998887654422 111 1222
Q ss_pred EEE-CC-EEEEEcccCCCCccCceEEeeCCC---CeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCC-----CccceE
Q psy14726 487 TTL-QG-KIYITGGFNGHNCLNSCEVYDPEC---NQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGM-----SRMCNG 555 (712)
Q Consensus 487 ~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~-----~~~~~v 555 (712)
+.- ++ .|||.-.. .+.+.+||... ..++.+..++. -.+++.- +|.|||....... .....+
T Consensus 191 a~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~~~~~~~~~g---P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v 262 (322)
T 2fp8_A 191 EVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGTAEVLVKIPN---PGNIKRNADGHFWVSSSEELDGNMHGRVDPKG 262 (322)
T ss_dssp EECTTSSEEEEEEGG-----GTEEEEEESSSTTTTCEEEEEECSS---EEEEEECTTSCEEEEEEEETTSSTTSCEEEEE
T ss_pred EECCCCCEEEEEeCC-----CCeEEEEECCCCcCCccceEEeCCC---CCCeEECCCCCEEEEecCcccccccCCCccEE
Confidence 322 33 58887432 25789998875 34444433332 1223222 4679987532100 113568
Q ss_pred EEEeCCCCcEEEcCCCCC--CccceEEEEECCEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 556 EKYNPVTKTWSQVPDMYN--PRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 556 ~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
.+||+....-..+..... .....+++.-++.|||.+..+ +.+.+|++..+
T Consensus 263 ~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~-----~~i~~~~~~~~ 314 (322)
T 2fp8_A 263 IKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFH-----GSVGILVYDKK 314 (322)
T ss_dssp EEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSC-----SEEEEEEC---
T ss_pred EEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCC-----CceEEEecccc
Confidence 999997554444432110 122334455688999875432 36788887643
No 190
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.34 E-value=1.8 Score=49.15 Aligned_cols=235 Identities=6% Similarity=-0.126 Sum_probs=115.5
Q ss_pred ceEEEEECCCC---cEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCc----
Q psy14726 363 DFVETYDTRAD---RWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKR---- 434 (712)
Q Consensus 363 ~~v~~~d~~~~---~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r---- 434 (712)
..++.+|..++ ....+... .......+.. +++.++++.. +.++.+|..+++...+.......
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~----~~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g~~~~~~~~~~~~~~~g 198 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHG----EGFATDAKLSPKGGFVSFIRG------RNLWVIDLASGRQMQLTADGSTTIGNG 198 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCS----SSCEEEEEECTTSSEEEEEET------TEEEEEETTTTEEEECCCCCCSSEEES
T ss_pred CcEEEEECCCCCcceEEEcccC----CcccccccCCCCCCEEEEEeC------CcEEEEecCCCCEEEeccCCccceecc
Confidence 57888998876 43332111 1112223333 5655555542 37999999998877765433210
Q ss_pred ------------ceeEEEEECCeEEEEcccCCC----------------------------CCCceeEEeecCC-CceEE
Q psy14726 435 ------------CYVSTAVHHDVIYAMGGYNGQ----------------------------RRQNSVEKYNYTE-NQWSL 473 (712)
Q Consensus 435 ------------~~~~~~~~~~~iyv~GG~~~~----------------------------~~~~~v~~yd~~~-~~W~~ 473 (712)
.......-+|+.++++..++. .....++.+|..+ .+-..
T Consensus 199 ~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~ 278 (741)
T 2ecf_A 199 IAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQW 278 (741)
T ss_dssp CCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEE
T ss_pred ccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEE
Confidence 111222335554444433221 1123788899888 76554
Q ss_pred cccC-Cc-cccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCC----CcceEEEEECCEEEEEcCCC
Q psy14726 474 IAPM-NV-ERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHR----RSGVSCIAYHECIYVIGGFN 547 (712)
Q Consensus 474 ~~~~-p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~----r~~~~~~~~~~~iyv~GG~~ 547 (712)
+... .. ......+. -+|+..+++..+......+++.+|+.+++...+...... .....+..-++++++.++.+
T Consensus 279 ~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 357 (741)
T 2ecf_A 279 IDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERT 357 (741)
T ss_dssp ECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTT
T ss_pred ecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCC
Confidence 4321 11 11111222 444444444332223346799999999887665321111 11122233367776666543
Q ss_pred CCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CC-EEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 548 GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DD-MIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
+ ...++.+|.... +..+..... .-...+.+ ++ .|++.+..++ .....+|..+.....-..+
T Consensus 358 g---~~~l~~~~~~~~-~~~l~~~~~--~v~~~~~~s~dg~~l~~~~~~~~-~~~~~l~~~~~~g~~~~~l 421 (741)
T 2ecf_A 358 G---FQHLYRIDSKGK-AAALTHGNW--SVDELLAVDEKAGLAYFRAGIES-ARESQIYAVPLQGGQPQRL 421 (741)
T ss_dssp S---SCEEEEECSSSC-EEESCCSSS--CEEEEEEEETTTTEEEEEECSSC-TTCBEEEEEETTCCCCEEC
T ss_pred C---ccEEEEEcCCCC-eeeeeecce--EEEeEeEEeCCCCEEEEEEeCCC-CceEEEEEEEcCCCCeeec
Confidence 3 357888887666 666643221 11122222 44 5666655332 1123466666544433333
No 191
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=95.32 E-value=0.0027 Score=53.43 Aligned_cols=84 Identities=17% Similarity=0.128 Sum_probs=64.7
Q ss_pred EEEEecCCcEEeceeeeecccC-HHHHHhhcCCC-CcCCccceEEcCCCCHHHHHHHhhhhccCceecChh-hHHHHHHH
Q psy14726 95 ATIVLADNSHFPIHRNILCACS-DYFRALFTTSL-HDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITED-NVASLLLA 171 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S-~yF~~mf~~~~-~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~i~~~-~~~~ll~~ 171 (712)
|+|.| +|+.|...+..|.... ..+.+||.+.. ..... .++.| |=++..|+.||+|+-+|++.++.+ .+..+++-
T Consensus 7 V~LNV-GG~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~-g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~~~~~~~E 83 (115)
T 3kvt_A 7 VIINV-GGIRHETYKATLKKIPATRLSRLTEGMLNYDPVL-NEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCGPLFEEE 83 (115)
T ss_dssp EEEEE-TTEEEEEEHHHHTTSCSSTTTTCCTTSTTEETTT-TEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHH
T ss_pred EEEEE-CCEEEEecHHHHhcCCCccHHHHhcCCCCCCCCC-CcEEE-ecChHHHHHHHHHhcCCCCCCCCcccHHHHHHH
Confidence 78889 9999999999998763 34666776432 11233 56766 578999999999999999977654 46789999
Q ss_pred hhhcChHHHH
Q psy14726 172 TDFFCMSKAQ 181 (712)
Q Consensus 172 A~~~~i~~L~ 181 (712)
|.+|+|++..
T Consensus 84 a~fy~i~~~~ 93 (115)
T 3kvt_A 84 LEFWGLDSNQ 93 (115)
T ss_dssp HHHHTCCGGG
T ss_pred HHHhCCChHH
Confidence 9999997653
No 192
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.28 E-value=2.7 Score=41.96 Aligned_cols=229 Identities=9% Similarity=0.019 Sum_probs=112.6
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCc----EEEcccCCCCCCCcceEEEEE-CCE-EEEEeecCCCCccceEEEEEC-CC
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADR----WVKIEQVDPMGPRAYHGTAVI-GYN-IYVIGGFDGNEYYNSCRCFNA-VT 421 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~----W~~~~~~~~~~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~v~~yd~-~~ 421 (712)
..++.|+.+ ..+..||..++. ...+. .....-.+++.. ++. .++.|+.+ ..+..||. .+
T Consensus 24 ~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~ 89 (342)
T 1yfq_A 24 SLLLITSWD-----GSLTVYKFDIQAKNVDLLQSL----RYKHPLLCCNFIDNTDLQIYVGTVQ-----GEILKVDLIGS 89 (342)
T ss_dssp TEEEEEETT-----SEEEEEEEETTTTEEEEEEEE----ECSSCEEEEEEEESSSEEEEEEETT-----SCEEEECSSSS
T ss_pred CEEEEEcCC-----CeEEEEEeCCCCccccceeee----ecCCceEEEEECCCCCcEEEEEcCC-----CeEEEEEeccC
Confidence 345556532 357777766555 32221 111222334443 666 77777754 35899999 88
Q ss_pred CcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc-------eEEcccCCccccceeEEEECCEEE
Q psy14726 422 KVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ-------WSLIAPMNVERSDASATTLQGKIY 494 (712)
Q Consensus 422 ~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~-------W~~~~~~p~~r~~~~~~~~~~~iy 494 (712)
++...+...+....-.+++...+..++.|+.+ ..+..||+.+.. ...+..+.....-.+++...+. +
T Consensus 90 ~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l 163 (342)
T 1yfq_A 90 PSFQALTNNEANLGICRICKYGDDKLIAASWD-----GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-L 163 (342)
T ss_dssp SSEEECBSCCCCSCEEEEEEETTTEEEEEETT-----SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-E
T ss_pred CceEeccccCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-E
Confidence 87766654212222223333336666666643 467888876400 2222223322222233333445 5
Q ss_pred EEcccCCCCccCceEEeeCCC-Ce--eEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCC------
Q psy14726 495 ITGGFNGHNCLNSCEVYDPEC-NQ--WTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTK------ 563 (712)
Q Consensus 495 v~GG~~~~~~~~~v~~yd~~~-~~--W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~------ 563 (712)
+.|+.+ ..+..||..+ .. ...... +....-.++... ++..++.|+.+ ..+..||....
T Consensus 164 ~~~~~d-----~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~ 232 (342)
T 1yfq_A 164 IVGMNN-----SQVQWFRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGYACSSID-----GRVAVEFFDDQGDDYNS 232 (342)
T ss_dssp EEEEST-----TEEEEEESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEEEEEETT-----SEEEEEECCTTCCSTTC
T ss_pred EEEeCC-----CeEEEEECCccccccceeeec-CCCCceeEEEECCCCCCEEEEEecC-----CcEEEEEEcCCCccccc
Confidence 556544 3688898877 33 222211 111122233333 46677777753 34555554332
Q ss_pred --cEEEcCCCC--C---CccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 564 --TWSQVPDMY--N---PRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 564 --~W~~~~~~p--~---~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
......... . .......+.+ ++++++.|+.++ .+.+||..+++-.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-----~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 233 SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG-----IISCWNLQTRKKI 286 (342)
T ss_dssp TTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTS-----CEEEEETTTTEEE
T ss_pred ccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCc-----eEEEEcCccHhHh
Confidence 222111110 0 0112222333 677778887665 5889999887653
No 193
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.27 E-value=0.22 Score=51.60 Aligned_cols=197 Identities=9% Similarity=-0.080 Sum_probs=100.3
Q ss_pred cceEEEEECCCCcEEEeCCCCCCcceeEEEEE-CCe-EEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEE
Q psy14726 411 YNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-HDV-IYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATT 488 (712)
Q Consensus 411 ~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~ 488 (712)
...++.+|+.+++...+...+ ....+....- ++. |+.............++.+|..+..+..+.. ..+........
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~-~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~ 244 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDT-AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEF 244 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEES-SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEE
T ss_pred cceEEEEECCCCcEEeeccCC-cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceE
Confidence 357899999998877665321 1122222223 344 4443321111122579999998888777654 21111122223
Q ss_pred E--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCC-----------CCccce
Q psy14726 489 L--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNG-----------MSRMCN 554 (712)
Q Consensus 489 ~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~-----------~~~~~~ 554 (712)
+ +|+.+++.+.........++.+|..+++...+...+. .. ....- +++++++++.+. ......
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~ 321 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPF 321 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCE
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCc
Confidence 3 5553333332221222449999999988777765442 22 23333 677666644221 112367
Q ss_pred EEEEeCCCCcEEEcCCCCCCc---------cceEEE-EECC-EEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 555 GEKYNPVTKTWSQVPDMYNPR---------SNFAIE-VIDD-MIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 555 v~~yd~~~~~W~~~~~~p~~r---------~~~~~~-~~~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
++.+|+.+.+...+...+..- .....+ .-++ .|++.+...+ ...++.+|..++.++.+
T Consensus 322 i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~---~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 322 LYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG---VPAIYIADVPESYKHLE 390 (396)
T ss_dssp EEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS---SCEEEEEECCTTCC---
T ss_pred EEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCC---CceEEEEEEcccccccc
Confidence 999999887765553322100 011111 2244 4555443332 23689999888887664
No 194
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.27 E-value=2.1 Score=43.14 Aligned_cols=138 Identities=10% Similarity=0.123 Sum_probs=71.7
Q ss_pred eEEEEECCCCcEE-EcccCCCC-CCCcceEEEEE-C----CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce
Q psy14726 364 FVETYDTRADRWV-KIEQVDPM-GPRAYHGTAVI-G----YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY 436 (712)
Q Consensus 364 ~v~~~d~~~~~W~-~~~~~~~~-~~r~~~~~~~~-~----~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~ 436 (712)
.+..||..+++.. .+.....+ ....-.+++.. + +.+++.|+.+ ..+..||..+++-...-.-. ...-
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~-~~~i 118 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR-----GIIRIINPITMQCIKHYVGH-GNAI 118 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT-----CEEEEECTTTCCEEEEEESC-CSCE
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC-----CEEEEEEchhceEeeeecCC-CCcE
Confidence 5778887755432 22111111 11222333333 3 5788888754 36889998876643221111 1112
Q ss_pred eEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCceEEc-ccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEe
Q psy14726 437 VSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI-APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVY 511 (712)
Q Consensus 437 ~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~y 511 (712)
.+++.. ++.+++.|+.+ ..+..||..+.+-... ..+.........+.+ ++..++.||.++ .+..|
T Consensus 119 ~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~ 188 (366)
T 3k26_A 119 NELKFHPRDPNLLLSVSKD-----HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH-----SLKLW 188 (366)
T ss_dssp EEEEECSSCTTEEEEEETT-----SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS-----CEEEE
T ss_pred EEEEECCCCCCEEEEEeCC-----CeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCC-----CEEEE
Confidence 223332 56788888754 4688999887764332 111222222233333 566777777653 57788
Q ss_pred eCCCCe
Q psy14726 512 DPECNQ 517 (712)
Q Consensus 512 d~~~~~ 517 (712)
|..+.+
T Consensus 189 d~~~~~ 194 (366)
T 3k26_A 189 RINSKR 194 (366)
T ss_dssp ESCSHH
T ss_pred ECCCCc
Confidence 877653
No 195
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.26 E-value=5 Score=44.99 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=67.9
Q ss_pred CcCCCceEEEEeecCCCCCCceEEEEECCCCc--EEEcccCCCCC--------CCcceEEEEECCEEEEEeecCCCCccc
Q psy14726 343 PRVPHEILFAIGGWSGGSPTDFVETYDTRADR--WVKIEQVDPMG--------PRAYHGTAVIGYNIYVIGGFDGNEYYN 412 (712)
Q Consensus 343 pr~~~~~i~~~GG~~~~~~~~~v~~~d~~~~~--W~~~~~~~~~~--------~r~~~~~~~~~~~lyv~GG~~~~~~~~ 412 (712)
|-...+.||+... ...+.++|..+++ |..- ...+. .....+.++.+++||+... ..
T Consensus 62 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg 127 (668)
T 1kv9_A 62 PLFHDGVIYTSMS------WSRVIAVDAASGKELWRYD--PEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------DG 127 (668)
T ss_dssp CEEETTEEEEEEG------GGEEEEEETTTCCEEEEEC--CCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------TS
T ss_pred CEEECCEEEEECC------CCeEEEEECCCChhceEEC--CCCCccccccccccCCccceEEECCEEEEEcC------CC
Confidence 3334556666543 2468899987664 8762 22110 0112334566888887642 24
Q ss_pred eEEEEECCCCc--EEEeCCCCC--CcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEc
Q psy14726 413 SCRCFNAVTKV--WKEIAPMNF--KRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLI 474 (712)
Q Consensus 413 ~v~~yd~~~~~--W~~~~~~~~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 474 (712)
.++.+|..|++ |+.-..-+. .....+-++.++.||+..+.........++.||+.+.+ |+.-
T Consensus 128 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 128 RLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 69999999886 875432211 11222345678888885432222234679999998865 8753
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.24 E-value=5 Score=45.59 Aligned_cols=247 Identities=7% Similarity=-0.027 Sum_probs=126.3
Q ss_pred CCCceEEEEECC---CCcEEEcccCC-CCCCC-cceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCC
Q psy14726 360 SPTDFVETYDTR---ADRWVKIEQVD-PMGPR-AYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF 432 (712)
Q Consensus 360 ~~~~~v~~~d~~---~~~W~~~~~~~-~~~~r-~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~ 432 (712)
.....++..+.. ...|..+-... +.... ........ +++.++++...++.....++.+|..+++...... +.
T Consensus 130 ~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~ 208 (741)
T 1yr2_A 130 MNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KW 208 (741)
T ss_dssp CSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EE
T ss_pred CeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CC
Confidence 334567777766 56666542111 11111 11122222 6666666654433334579999999998765311 11
Q ss_pred CcceeEEEEECCeEEEEcccCCC---------CCCceeEEeecCCCce--EEcccCCccccceeEEEE--CCEEEEEccc
Q psy14726 433 KRCYVSTAVHHDVIYAMGGYNGQ---------RRQNSVEKYNYTENQW--SLIAPMNVERSDASATTL--QGKIYITGGF 499 (712)
Q Consensus 433 ~r~~~~~~~~~~~iyv~GG~~~~---------~~~~~v~~yd~~~~~W--~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 499 (712)
... .+.+...++-++++..... .....+++++..+..- ..+-..+........+.+ +|+..++...
T Consensus 209 ~~~-~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~ 287 (741)
T 1yr2_A 209 VKF-SGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSS 287 (741)
T ss_dssp EES-CCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cee-ccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEE
Confidence 110 1122222243333332221 1245688888876652 122222211111222223 5654444443
Q ss_pred CCCCccCceEEeeCCCC--e-eEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCC--CcEEEcCCCCCC
Q psy14726 500 NGHNCLNSCEVYDPECN--Q-WTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVT--KTWSQVPDMYNP 574 (712)
Q Consensus 500 ~~~~~~~~v~~yd~~~~--~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~p~~ 574 (712)
.+....+.++.+|..+. . |..+..-....... +...++.||+....+ .....++.+|..+ ..|..+-+-...
T Consensus 288 ~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~~~~~~ 364 (741)
T 1yr2_A 288 EGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVVPESKD 364 (741)
T ss_dssp CTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTT--CTTCEEEEEECSSSSCEEEEEECCCSS
T ss_pred ccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCC--CCCCEEEEEeCCCCccccEEEecCCCC
Confidence 33223568999998877 6 88876433222222 234567788776432 2246799999987 579887432211
Q ss_pred ccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 575 RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 575 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
...++...++.+++....++ ...++++|+..+.-..+
T Consensus 365 -~l~~~~~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 365 -NLESVGIAGNRLFASYIHDA---KSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp -EEEEEEEEBTEEEEEEEETT---EEEEEEEETTSCEEEEC
T ss_pred -eEEEEEEECCEEEEEEEECC---EEEEEEEeCCCCceeec
Confidence 12233445888888876554 34688888765544444
No 197
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.22 E-value=0.57 Score=46.90 Aligned_cols=225 Identities=13% Similarity=0.024 Sum_probs=107.8
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCC-cceEEEEE-CC-EEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCC----cc
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPR-AYHGTAVI-GY-NIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFK----RC 435 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r-~~~~~~~~-~~-~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~----r~ 435 (712)
..+..+|..+++.... ...+... ..+.+++. ++ .+|+.++. ...++.+|+.+++-...-+.+.+ ..
T Consensus 11 ~~v~~~d~~~~~~~~~--~~~~~~~~~~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKV--ITIADAGPTPMVPMVAPGGRIAYATVNK-----SESLVKIDLVTGETLGRIDLSTPEERVKS 83 (337)
T ss_dssp TEEEEEETTTTEEEEE--EECTTCTTCCCCEEECTTSSEEEEEETT-----TTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred CeEEEEECCCCcEEEE--EEcCCCCCCccceEEcCCCCEEEEEeCC-----CCeEEEEECCCCCeEeeEEcCCccccccc
Confidence 4688899988765432 1111110 12234443 44 67776642 24699999988875432222110 01
Q ss_pred eeEEEE-ECC-eEEEEcccC---CCC---CCceeEEeecCCCceEEcccCCccccceeEEEE-CCE-EEEEcccCCCCcc
Q psy14726 436 YVSTAV-HHD-VIYAMGGYN---GQR---RQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGK-IYITGGFNGHNCL 505 (712)
Q Consensus 436 ~~~~~~-~~~-~iyv~GG~~---~~~---~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~ 505 (712)
-+.++. -++ .+|+..+.. ... ....+.+||+.+.+....-+. +..-..++.- +++ +|+.+
T Consensus 84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~-------- 153 (337)
T 1pby_B 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYGLG-------- 153 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEES--------
T ss_pred ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--CCCcceeEECCCCCEEEEeC--------
Confidence 122333 244 677664210 011 236799999988765433222 2222233322 444 77662
Q ss_pred CceEEeeCCCCeeEEeCCCCC-CCcceEEEEECCEEEEEcCCCCC------------------CccceEEEEeCCCCcEE
Q psy14726 506 NSCEVYDPECNQWTLIEPMRH-RRSGVSCIAYHECIYVIGGFNGM------------------SRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 506 ~~v~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~------------------~~~~~v~~yd~~~~~W~ 566 (712)
..+..||..+++-...-+... .+. .....-+..+|+.+...+. .....+..||+.+.+-.
T Consensus 154 ~~i~~~d~~~~~~~~~~~~~~~~~~-~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 232 (337)
T 1pby_B 154 RDLHVMDPEAGTLVEDKPIQSWEAE-TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA 232 (337)
T ss_dssp SSEEEEETTTTEEEEEECSTTTTTT-TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred CeEEEEECCCCcEeeeeeccccCCC-ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce
Confidence 468999998887543322111 111 0111112223333221100 00126889999887654
Q ss_pred EcCCCCCCccceEEEEE-CC-EEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 567 QVPDMYNPRSNFAIEVI-DD-MIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 567 ~~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
.+...+......+++.. ++ .+|+. ...+.+||+.+.+-.
T Consensus 233 ~~~~~~~~~~~~~~~~s~dg~~l~~~--------~~~v~~~d~~~~~~~ 273 (337)
T 1pby_B 233 MREVRIMDVFYFSTAVNPAKTRAFGA--------YNVLESFDLEKNASI 273 (337)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEE--------ESEEEEEETTTTEEE
T ss_pred EeecCCCCCceeeEEECCCCCEEEEe--------CCeEEEEECCCCcCc
Confidence 33211122222233333 34 45544 147899999887654
No 198
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=95.19 E-value=1.5 Score=44.25 Aligned_cols=222 Identities=8% Similarity=-0.080 Sum_probs=114.1
Q ss_pred CceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEE
Q psy14726 362 TDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA 440 (712)
Q Consensus 362 ~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~ 440 (712)
...++.+|..+++-..+ ......+.. +++.+++....++.....++.+|..+++...+...+. ....+
T Consensus 42 ~~~l~~~d~~~~~~~~l--------~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~---~~~~~ 110 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI--------ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN---IRSLE 110 (347)
T ss_dssp EEEEEEEETTTCCEEEE--------ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE---EEEEE
T ss_pred cceEEEEeCCCCceEEc--------ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC---cccee
Confidence 34688888887765553 111222232 4444444433222224569999999988777655432 22222
Q ss_pred E-ECCeEEEEcccC------------------CC----CCCceeEEeecCCCce-EEcccCCccccceeEEEE-CCEEEE
Q psy14726 441 V-HHDVIYAMGGYN------------------GQ----RRQNSVEKYNYTENQW-SLIAPMNVERSDASATTL-QGKIYI 495 (712)
Q Consensus 441 ~-~~~~iyv~GG~~------------------~~----~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~-~~~iyv 495 (712)
. -+|+.++++... +. .....++++|+.+++. ..+.. + .....+.. ++ +++
T Consensus 111 wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg-~~~ 185 (347)
T 2gop_A 111 WNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDK-IVV 185 (347)
T ss_dssp ECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTE-EEE
T ss_pred ECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCe-EEE
Confidence 2 256544444321 00 1135799999998887 66654 3 22223333 55 555
Q ss_pred EcccCCCC---c-cCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCE-EEEEcCCC--CCCccceEEEEeCCCCcEEEc
Q psy14726 496 TGGFNGHN---C-LNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHEC-IYVIGGFN--GMSRMCNGEKYNPVTKTWSQV 568 (712)
Q Consensus 496 ~GG~~~~~---~-~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~-iyv~GG~~--~~~~~~~v~~yd~~~~~W~~~ 568 (712)
.+..+... . ...++.+| +++++.+..- .......-+|+ |++.+... +......++.+| +.++..+
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 186 NVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp EEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred EEecccccccccccccEEEeC--CCceEEeccC----cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence 55443221 2 45788888 7777766532 22222244655 44444221 112346799999 6777776
Q ss_pred CCCCCCccceE-EEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 569 PDMYNPRSNFA-IEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 569 ~~~p~~r~~~~-~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
..-.. ..... .+..++ +|+.+..++ ...+| ++ +++...+
T Consensus 258 ~~~~~-~~~~~~~~~sdg-~~~~~~~~~---~~~l~-~~--~g~~~~~ 297 (347)
T 2gop_A 258 LDEVD-RGVGQAKIKDGK-VYFTLFEEG---SVNLY-IW--DGEIKPI 297 (347)
T ss_dssp STTCC-SEEEEEEEETTE-EEEEEEETT---EEEEE-EE--SSSEEEE
T ss_pred cccCC-cccCCccEEcCc-EEEEEecCC---cEEEE-Ec--CCceEEE
Confidence 43221 11121 222244 777766554 23567 77 3444433
No 199
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.17 E-value=1.1 Score=46.08 Aligned_cols=195 Identities=10% Similarity=-0.085 Sum_probs=99.4
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECC
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQG 491 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 491 (712)
..++.+|..+++...+..-...........-+|+.+++.+.. ..++++|+.+.+-..+...+.. ..-++
T Consensus 60 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~d~~~~~~~~~~~~~~~------~~~~g 128 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE-----LNLMKVDLETLEEQVIYTVDEE------WKGYG 128 (396)
T ss_dssp CEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT-----TEEEEEETTTCCEEEEEECCTT------EEEEE
T ss_pred ceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC-----CcEEEEECCCCCcEEEEecccc------cCCCC
Confidence 468999999988777654332111112223455544444322 2689999888776555443322 11122
Q ss_pred EEEEEccc-------------C--CC----------CccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCE-EEEEc
Q psy14726 492 KIYITGGF-------------N--GH----------NCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HEC-IYVIG 544 (712)
Q Consensus 492 ~iyv~GG~-------------~--~~----------~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~G 544 (712)
+.+++... . +. .....++.+|..+++...+...+. ...+....- ++. |++..
T Consensus 129 ~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~-~~~~~~~sp~dg~~l~~~~ 207 (396)
T 3c5m_A 129 TWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTA-WLGHPIYRPFDDSTVGFCH 207 (396)
T ss_dssp EEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEE
T ss_pred CEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCc-ccccceECCCCCCEEEEEe
Confidence 22222110 0 00 123578899999888776653211 122222222 344 54443
Q ss_pred CCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCC
Q psy14726 545 GFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMN 619 (712)
Q Consensus 545 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 619 (712)
..........++.+|..+..+..+.. ..+........+ +++.+++++.........++++|+.+++...+...+
T Consensus 208 ~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~ 283 (396)
T 3c5m_A 208 EGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP 283 (396)
T ss_dssp CSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC
T ss_pred cCCCCCCCceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC
Confidence 21111112579999998888777754 221212222233 555333333222222235999999998877765544
No 200
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.16 E-value=2.5 Score=40.92 Aligned_cols=195 Identities=12% Similarity=0.003 Sum_probs=109.9
Q ss_pred eEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeEEee
Q psy14726 390 HGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYN 465 (712)
Q Consensus 390 ~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd 465 (712)
+++++. ++.||+.-.. ...++++|+....-..+..... ..-+++++- ++.||+.-.. .+.+.++|
T Consensus 39 ~gi~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~~~~lyv~d~~-----~~~I~~~~ 107 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQDL-GSPEGIALDHLGRTIFWTDSQ-----LDRIEVAK 107 (267)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEEESSSCCCEEEECTTC-CCEEEEEEETTTTEEEEEETT-----TTEEEEEE
T ss_pred EEEEEecCCCEEEEEECC-----CCEEEEEecCCCCcEEEEECCC-CCccEEEEEecCCeEEEEECC-----CCEEEEEE
Confidence 455655 5789987542 3579999998765433322111 123445553 5799997532 35789999
Q ss_pred cCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEE
Q psy14726 466 YTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIY 541 (712)
Q Consensus 466 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iy 541 (712)
+....-..+.+....+ -..+++- +++||+..... ....++++++....-+.+..... ..-.+++.- ++.||
T Consensus 108 ~~g~~~~~~~~~~~~~-P~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~ly 182 (267)
T 1npe_A 108 MDGTQRRVLFDTGLVN-PRGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLC 182 (267)
T ss_dssp TTSCSCEEEECSSCSS-EEEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEE
T ss_pred cCCCCEEEEEECCCCC-ccEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEE
Confidence 8765433332211111 1233333 68999986321 12568888876544333322111 122233333 57899
Q ss_pred EEcCCCCCCccceEEEEeCCCCcEEEc-CCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 542 VIGGFNGMSRMCNGEKYNPVTKTWSQV-PDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 542 v~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
+.-.. .+.+.++|+....-..+ .....| .+++.-++.+|+....+ +.+.++|+.+++-.
T Consensus 183 v~d~~-----~~~I~~~~~~g~~~~~~~~~~~~P---~gi~~d~~~lyva~~~~-----~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 183 WVDAG-----THRAECLNPAQPGRRKVLEGLQYP---FAVTSYGKNLYYTDWKT-----NSVIAMDLAISKEM 242 (267)
T ss_dssp EEETT-----TTEEEEEETTEEEEEEEEECCCSE---EEEEEETTEEEEEETTT-----TEEEEEETTTTEEE
T ss_pred EEECC-----CCEEEEEecCCCceEEEecCCCCc---eEEEEeCCEEEEEECCC-----CeEEEEeCCCCCce
Confidence 98643 36899999875432222 222222 45566689999974332 36899999987654
No 201
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.16 E-value=0.45 Score=49.20 Aligned_cols=216 Identities=7% Similarity=0.013 Sum_probs=102.6
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE----CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-e
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI----GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-V 437 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~ 437 (712)
..+..+|..+.+-..... .+ ....++... ++.+++.|+.+ ..+..||..+.+-... +...... .
T Consensus 122 ~~i~iwd~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~d~~~~~~~~~--~~~~~~~v~ 190 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFN--FE--ETVYSHHMSPVSTKHCLVAVGTRG-----PKVQLCDLKSGSCSHI--LQGHRQEIL 190 (408)
T ss_dssp SEEEEEETTTTEEEEEEE--CS--SCEEEEEECSSCSSCCEEEEEESS-----SSEEEEESSSSCCCEE--ECCCCSCEE
T ss_pred CeEEEeeCCCCccceecc--CC--CceeeeEeecCCCCCcEEEEEcCC-----CeEEEEeCCCcceeee--ecCCCCcEE
Confidence 468888988876554211 11 111222222 33467777643 3588999887653221 1111111 2
Q ss_pred EEEEE-CCe-EEEEcccCCCCCCceeEEeecCCCc--eEEccc------------CCccccceeEEEE--CCEEEEEccc
Q psy14726 438 STAVH-HDV-IYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAP------------MNVERSDASATTL--QGKIYITGGF 499 (712)
Q Consensus 438 ~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~------------~p~~r~~~~~~~~--~~~iyv~GG~ 499 (712)
+++.. ++. +++.|+.+ ..+..||..+.. ...+.. ..........+.+ +++.++.|+.
T Consensus 191 ~~~~~~~~~~ll~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 265 (408)
T 4a11_B 191 AVSWSPRYDYILATASAD-----SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT 265 (408)
T ss_dssp EEEECSSCTTEEEEEETT-----SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCCcEEEEEcCC-----CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecC
Confidence 23332 333 77777754 357788876543 111100 0111111222233 6667777776
Q ss_pred CCCCccCceEEeeCCCCeeEEeCC-----CCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCC
Q psy14726 500 NGHNCLNSCEVYDPECNQWTLIEP-----MRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP 574 (712)
Q Consensus 500 ~~~~~~~~v~~yd~~~~~W~~~~~-----~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 574 (712)
++ .+..||..+.+-..... ..............+..+++++.+ ..+..||..+.+-...-.....
T Consensus 266 dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~i~v~d~~~~~~~~~~~~~~~ 335 (408)
T 4a11_B 266 DN-----RMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG-----STIAVYTVYSGEQITMLKGHYK 335 (408)
T ss_dssp TS-----CEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET-----TEEEEEETTTCCEEEEECCCSS
T ss_pred CC-----eEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC-----CEEEEEECcCCcceeeeccCCC
Confidence 53 58888887765322110 001111111111122333333322 4788899877653332111111
Q ss_pred ccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 575 RSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 575 r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
. -.+++.. ++.+++.||.++ .+.+||+.+.
T Consensus 336 ~-v~~~~~s~~~~~l~s~~~dg-----~i~iw~~~~~ 366 (408)
T 4a11_B 336 T-VDCCVFQSNFQELYSGSRDC-----NILAWVPSLY 366 (408)
T ss_dssp C-EEEEEEETTTTEEEEEETTS-----CEEEEEECC-
T ss_pred e-EEEEEEcCCCCEEEEECCCC-----eEEEEeCCCC
Confidence 1 1223333 677888888766 5677777664
No 202
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.16 E-value=0.81 Score=44.47 Aligned_cols=189 Identities=7% Similarity=-0.092 Sum_probs=103.2
Q ss_pred ccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCC-CceEEcccCCc-cccceeEE
Q psy14726 410 YYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTE-NQWSLIAPMNV-ERSDASAT 487 (712)
Q Consensus 410 ~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~-~r~~~~~~ 487 (712)
....++.+|+.+++...+...+. ........-+++.+++++. ..+++||+.+ .+...+...+. ......+.
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPE-LFEAPNWSPDGKYLLLNSE------GLLYRLSLAGDPSPEKVDTGFATICNNDHGI 92 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESS-CCEEEEECTTSSEEEEEET------TEEEEEESSSCCSCEECCCTTCCCBCSCCEE
T ss_pred cceeEEEEeCCCCceeeeccCCc-ceEeeEECCCCCEEEEEcC------CeEEEEeCCCCCCceEeccccccccccceEE
Confidence 34679999999988775543221 1112222336676666542 4799999998 77766644332 12222222
Q ss_pred EECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC-EEEEEcCCCCCCccceEEEEeCCCCcE
Q psy14726 488 TLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPVTKTW 565 (712)
Q Consensus 488 ~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W 565 (712)
.-+++.+++++... .....++.+|..+.....+..... ...+... ++ .|++.++.++ ...++.+|..+...
T Consensus 93 spdg~~l~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~---~~~l~~~~~~~~~~ 165 (297)
T 2ojh_A 93 SPDGALYAISDKVE-FGKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQ---VFDIYSMDIDSGVE 165 (297)
T ss_dssp CTTSSEEEEEECTT-TSSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETT---EEEEEEEETTTCCE
T ss_pred CCCCCEEEEEEeCC-CCcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCC---ceEEEEEECCCCcc
Confidence 22666666655332 134678899988877665543221 2222222 44 4554554332 24678888888777
Q ss_pred EEcCCCCCCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEECCCCeEEEccC
Q psy14726 566 SQVPDMYNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTDEWYEATD 617 (712)
Q Consensus 566 ~~~~~~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 617 (712)
..+...+.. ...++.. +++ |++.++.++ ...+|.+++.+.....+..
T Consensus 166 ~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~~---~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 166 TRLTHGEGR--NDGPDYSPDGRWIYFNSSRTG---QMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp EECCCSSSC--EEEEEECTTSSEEEEEECTTS---SCEEEEEETTSSCEEECCC
T ss_pred eEcccCCCc--cccceECCCCCEEEEEecCCC---CccEEEECCCCCCcEEEec
Confidence 766543321 1222222 555 444443333 2368888888777766643
No 203
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.13 E-value=0.67 Score=47.73 Aligned_cols=215 Identities=9% Similarity=-0.083 Sum_probs=111.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
+++.++++...++ ...++.+|+.+++...+...+..........-+|+..+++..+ ..++.+|+.+.+-..+.
T Consensus 46 Dg~~l~~~~~~~g--~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~d~~~g~~~~~~ 118 (388)
T 3pe7_A 46 DGSKLLFGGAFDG--PWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-----RNLMRVDLATLEENVVY 118 (388)
T ss_dssp TSCEEEEEECTTS--SCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-----TEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEEcCCC--CceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-----CeEEEEECCCCcceeee
Confidence 4554445443221 2468999999998887765443322122334456544444321 47999999998876665
Q ss_pred cCCccccceeEEEE--CCEEEEEcccC-----------------CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE
Q psy14726 476 PMNVERSDASATTL--QGKIYITGGFN-----------------GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY 536 (712)
Q Consensus 476 ~~p~~r~~~~~~~~--~~~iyv~GG~~-----------------~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 536 (712)
..+........... +++.++.--.. .......++.+|..+++-+.+..-+. ...+....-
T Consensus 119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp 197 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ-WLGHPIYRP 197 (388)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS-CEEEEEEET
T ss_pred echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc-cccccEECC
Confidence 55543322222222 44433311000 01123678999999887666643221 223333333
Q ss_pred -CCEEEEEcCCCC-CCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 537 -HECIYVIGGFNG-MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 537 -~~~iyv~GG~~~-~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
+++.+++..... ......++.+|........+............+.. +++ |+.++...+ .....++++|+.+++-
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g~~ 276 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKG-SPDRFIYSADPETLEN 276 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETT-CCCEEEEEECTTTCCE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCC-CCcceEEEEecCCCce
Confidence 455333332211 12246899999988777766543221111122222 555 544433222 1112599999999887
Q ss_pred EEccCCC
Q psy14726 613 YEATDMN 619 (712)
Q Consensus 613 ~~~~~~p 619 (712)
..+...+
T Consensus 277 ~~l~~~~ 283 (388)
T 3pe7_A 277 RQLTSMP 283 (388)
T ss_dssp EEEEEEC
T ss_pred EEEEcCC
Confidence 6664443
No 204
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.09 E-value=1.9 Score=45.09 Aligned_cols=219 Identities=11% Similarity=0.153 Sum_probs=107.9
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCc-ceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRA-YHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA 440 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~-~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~ 440 (712)
+.|..+|..+++...+-. ...... -.+++.. ++..++.|+.++ .+..||..+++-.....- ......+.
T Consensus 125 ~tV~lWd~~tg~~~~~~~--~~~~~~~V~sv~fspdg~~lasgs~Dg-----~v~iWd~~~~~~~~~~~~--h~~~v~~~ 195 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQ--MEQPGEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMTS--HSARVGSL 195 (420)
T ss_dssp TEEEEEETTTCCEEEEEE--CCSTTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECC--CSSCEEEE
T ss_pred CEEEEEECCCCCEEEEEE--ecCCCCcEEEEEECCCCCEEEEEECCC-----eEEEEEcCCCcEEEEEeC--CCCceEEE
Confidence 478999999987665321 111111 1233333 677778888543 588999988764332222 22223445
Q ss_pred EECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCe-
Q psy14726 441 VHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ- 517 (712)
Q Consensus 441 ~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~- 517 (712)
..++.+.+.|+.+ ..+..+|..+...... .+............ ++..++.||.++ .+.++|..+++
T Consensus 196 s~~~~~l~sgs~d-----~~i~~~d~~~~~~~~~-~~~~h~~~~~~~~~~~~g~~l~s~~~D~-----~v~i~~~~~~~~ 264 (420)
T 4gga_A 196 SWNSYILSSGSRS-----GHIHHHDVRVAEHHVA-TLSGHSQEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPGEG 264 (420)
T ss_dssp EEETTEEEEEETT-----SEEEEEETTSSSCEEE-EEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESSCCSS
T ss_pred eeCCCEEEEEeCC-----CceeEeeecccceeeE-EecccccceeeeeecCCCCeeeeeeccc-----cceEEeeccccc
Confidence 5677888887754 4567777665443211 11111111112222 566666776553 45666665443
Q ss_pred -eEEeCCCCCCCcceEEEEE---CCEEEE-EcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEE
Q psy14726 518 -WTLIEPMRHRRSGVSCIAY---HECIYV-IGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAI 590 (712)
Q Consensus 518 -W~~~~~~p~~r~~~~~~~~---~~~iyv-~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~ 590 (712)
+..+...........+... +..+++ .||.. -..|..||..+.+-...-... ....+++.. ++.+++.
T Consensus 265 ~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~----D~~I~iwd~~t~~~~~~~~~~--~~v~~~~~~~~~~~lv~~ 338 (420)
T 4gga_A 265 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS----DRHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELISG 338 (420)
T ss_dssp CSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTT----TCEEEEEETTTTEEEEEEECS--SCEEEEEEETTTTEEEEE
T ss_pred cceeeeeecccCCceeeeeeCCCcccEEEEEeecC----CCEEEEEeCCccccceeeccc--cceeeeeecCCCCeEEEE
Confidence 1111111111111112222 334444 44532 146888998877544332211 111222222 4556655
Q ss_pred cccCCCceeeeEEEEECCCCe
Q psy14726 591 GGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 591 GG~~~~~~~~~v~~yd~~~~~ 611 (712)
+|... ..+.+||..+.+
T Consensus 339 sg~~d----~~I~iwd~~~~~ 355 (420)
T 4gga_A 339 HGFAQ----NQLVIWKYPTMA 355 (420)
T ss_dssp ECTTT----CCEEEEETTTCC
T ss_pred EecCC----CEEEEEECCCCc
Confidence 55433 257888877653
No 205
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=95.07 E-value=1.7 Score=45.18 Aligned_cols=187 Identities=10% Similarity=0.104 Sum_probs=105.8
Q ss_pred eEEEEECCC--CcEEEeCCCCCCcceeEEEEE---CCeEEEEcccCCCCCCceeEEeecCCCceEEcccC---Ccc--c-
Q psy14726 413 SCRCFNAVT--KVWKEIAPMNFKRCYVSTAVH---HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM---NVE--R- 481 (712)
Q Consensus 413 ~v~~yd~~~--~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---p~~--r- 481 (712)
.+++++... .+|....+......-++++.- ++.||+.+.... .-..+++.+-...+|+.+... +.. +
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~--~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~ 109 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGH--LGPTVFRSDDGGGNWTEATRPPAFNKAPEGE 109 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCCCCCC---
T ss_pred ceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCC--CCccEEEeCCCCCCceECCccccCCCccccc
Confidence 377777655 789876432222333445443 468888654211 112578887788899988532 211 1
Q ss_pred ----cce--eEEEE----CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCC---CC--------------CCcceEEE
Q psy14726 482 ----SDA--SATTL----QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM---RH--------------RRSGVSCI 534 (712)
Q Consensus 482 ----~~~--~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---p~--------------~r~~~~~~ 534 (712)
... +++.- .+.||+.+. ...+++.+-...+|+.+... |. ....++++
T Consensus 110 ~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~ 183 (394)
T 3b7f_A 110 TGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSIL 183 (394)
T ss_dssp -CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEE
T ss_pred ccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEE
Confidence 011 12222 467887542 13488888788899988532 21 11223343
Q ss_pred EE---CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCC------CCC-----ccceEEEEEC---CEEEEEcccCCCc
Q psy14726 535 AY---HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM------YNP-----RSNFAIEVID---DMIFAIGGFNGVT 597 (712)
Q Consensus 535 ~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~------p~~-----r~~~~~~~~~---~~i~v~GG~~~~~ 597 (712)
.. .+.||+.++. ..+++.+-...+|+.+... |.+ ...+.++... +.||+.. .
T Consensus 184 ~d~~~~~~l~vg~~~------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~-~---- 252 (394)
T 3b7f_A 184 VDPRDPKHLYIGMSS------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN-H---- 252 (394)
T ss_dssp ECTTCTTCEEEEEET------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE-T----
T ss_pred ECCCCCCEEEEEECC------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc-C----
Confidence 33 2568876432 3578888778899988531 211 2234444432 5676642 1
Q ss_pred eeeeEEEEECCCCeEEEccC-CCC
Q psy14726 598 TIYHVECYDEKTDEWYEATD-MNI 620 (712)
Q Consensus 598 ~~~~v~~yd~~~~~W~~~~~-~p~ 620 (712)
..+++.+-...+|+.+.. +|.
T Consensus 253 --~gl~~s~D~G~tW~~~~~~l~~ 274 (394)
T 3b7f_A 253 --CGIYRMDRREGVWKRIGDAMPR 274 (394)
T ss_dssp --TEEEEEETTTTEEECGGGGSCT
T ss_pred --CeEEEeCCCCCcceECCCCCCC
Confidence 247888888999999854 554
No 206
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.00 E-value=1.7 Score=43.70 Aligned_cols=226 Identities=8% Similarity=0.098 Sum_probs=111.2
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-C---CEEEEEeecCCCCccceEEEEECCCCc-
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-G---YNIYVIGGFDGNEYYNSCRCFNAVTKV- 423 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~---~~lyv~GG~~~~~~~~~v~~yd~~~~~- 423 (712)
.+++.|+... ....+..||..+++....... .....-.+++.. + +.+++.|+.+ ..+..||..+.+
T Consensus 32 ~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~ 102 (357)
T 3i2n_A 32 KFVTMGNFAR--GTGVIQLYEIQHGDLKLLREI--EKAKPIKCGTFGATSLQQRYLATGDFG-----GNLHIWNLEAPEM 102 (357)
T ss_dssp EEEEEEC--C--CCEEEEEEEECSSSEEEEEEE--EESSCEEEEECTTCCTTTCCEEEEETT-----SCEEEECTTSCSS
T ss_pred eEEEecCccC--CCcEEEEEeCCCCcccceeee--cccCcEEEEEEcCCCCCCceEEEecCC-----CeEEEEeCCCCCc
Confidence 4566665311 124678888888776542111 111111222222 2 4777777754 358888888765
Q ss_pred -EEEeCCCCCCcceeEEE-------EECCeEEEEcccCCCCCCceeEEeecCCCc--eEEcccCCc--cccceeEE----
Q psy14726 424 -WKEIAPMNFKRCYVSTA-------VHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNV--ERSDASAT---- 487 (712)
Q Consensus 424 -W~~~~~~~~~r~~~~~~-------~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~--~r~~~~~~---- 487 (712)
...+..-..+ -.++. ..++..++.|+.+ ..+..||+.+.. ...+..... .+.-.+++
T Consensus 103 ~~~~~~~~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 175 (357)
T 3i2n_A 103 PVYSVKGHKEI--INAIDGIGGLGIGEGAPEIVTGSRD-----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNA 175 (357)
T ss_dssp CSEEECCCSSC--EEEEEEESGGGCC-CCCEEEEEETT-----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECC
T ss_pred cEEEEEecccc--eEEEeeccccccCCCccEEEEEeCC-----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEec
Confidence 2222211111 11121 1356677777754 458888888764 333322111 11112222
Q ss_pred -EECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE----CCEEEEEcCCCCCCccceEEEEeCCC
Q psy14726 488 -TLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY----HECIYVIGGFNGMSRMCNGEKYNPVT 562 (712)
Q Consensus 488 -~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~ 562 (712)
.-++.+++.|+.+ ..+..||..+.+-........ .-.++... ++..++.|+.+ ..+..||..+
T Consensus 176 ~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~ 243 (357)
T 3i2n_A 176 YNQEERVVCAGYDN-----GDIKLFDLRNMALRWETNIKN--GVCSLEFDRKDISMNKLVATSLE-----GKFHVFDMRT 243 (357)
T ss_dssp CC-CCCEEEEEETT-----SEEEEEETTTTEEEEEEECSS--CEEEEEESCSSSSCCEEEEEEST-----TEEEEEEEEE
T ss_pred cCCCCCEEEEEccC-----CeEEEEECccCceeeecCCCC--ceEEEEcCCCCCCCCEEEEECCC-----CeEEEEeCcC
Confidence 1367777777755 368899998877433322221 22233333 45666777654 4577777654
Q ss_pred CcEEEcCCC------CCCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEECCC
Q psy14726 563 KTWSQVPDM------YNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 563 ~~W~~~~~~------p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
.+ .+..+ .....-.+++.. ++. +++.||.++ .+.+||..+
T Consensus 244 ~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~ 291 (357)
T 3i2n_A 244 QH--PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAG-----GLHLWKYEY 291 (357)
T ss_dssp EE--TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS-----EEEEEEEEC
T ss_pred CC--cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCC-----cEEEeecCC
Confidence 21 11111 111122233333 455 778888765 466666554
No 207
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=94.99 E-value=1.7 Score=40.65 Aligned_cols=143 Identities=15% Similarity=0.098 Sum_probs=82.1
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCCCcEEE--e----CCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeE
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE--I----APMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVE 462 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~--~----~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 462 (712)
+++..++.+|+|=| +.+|+++.....+.. + +.+|. ... ++... ++++|+|-| +.+|
T Consensus 28 Ai~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~-~iD-Aa~~~~~~~~iyfFkG-------~~~w 91 (207)
T 1pex_A 28 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPN-RID-AAYEHPSHDLIFIFRG-------RKFW 91 (207)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCS-SCC-EEEEETTTTEEEEEET-------TEEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCC-Ccc-EEEEeccCCcEEEEcc-------CEEE
Confidence 44556899999977 457888765544321 1 23442 122 22222 689999977 5678
Q ss_pred EeecCCCce---EEccc--CCccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEE-----e----CCCC
Q psy14726 463 KYNYTENQW---SLIAP--MNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTL-----I----EPMR 525 (712)
Q Consensus 463 ~yd~~~~~W---~~~~~--~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~p 525 (712)
+|+..+-.- ..+.. +|..-..--||.. ++++|+|-| +..++||..+++=.. + +.+|
T Consensus 92 ~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip 164 (207)
T 1pex_A 92 ALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFPGIG 164 (207)
T ss_dssp EESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHSTTSC
T ss_pred EEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCCCCC
Confidence 886432211 12222 2221112233333 489999987 568999987654210 0 1222
Q ss_pred CCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcE
Q psy14726 526 HRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTW 565 (712)
Q Consensus 526 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 565 (712)
..--++...++.+|++-| +..++||..+.+=
T Consensus 165 --~~iDaAf~~~g~~YfFkg-------~~y~rf~~~~~~v 195 (207)
T 1pex_A 165 --DKVDAVYEKNGYIYFFNG-------PIQFEYSIWSNRI 195 (207)
T ss_dssp --SCCSEEEEETTEEEEEET-------TEEEEEETTTTEE
T ss_pred --CCccEEEEcCCcEEEEEC-------CEEEEEeCCccEE
Confidence 223344456999999987 5788999877643
No 208
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=94.98 E-value=2.1 Score=45.27 Aligned_cols=149 Identities=9% Similarity=-0.024 Sum_probs=75.7
Q ss_pred CCEEEEEeecCCCCccceEEEEECC--CCcEEE-eCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAV--TKVWKE-IAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~--~~~W~~-~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
+..|++.|+.+ ..+..||.. +++... +.....+..-.+++. -+++.+++|+.+ ..++.+|..+...
T Consensus 114 ~~~l~~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~-----g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 114 ESRLIACADSD-----KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF-----GDVYSIDINSIPE 183 (450)
T ss_dssp SSEEEEEEGGG-----TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTSCCC
T ss_pred CCEEEEEECCC-----CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC-----CcEEEEecCCccc
Confidence 33456777753 357888877 544322 211011111122332 256666777642 4578888766543
Q ss_pred EE--cccCCccccceeEE--EEC---CEEEEEcccCCCCccCceEEeeCCCCeeEEe-C-CCCCCCcceEEEEECCEEEE
Q psy14726 472 SL--IAPMNVERSDASAT--TLQ---GKIYITGGFNGHNCLNSCEVYDPECNQWTLI-E-PMRHRRSGVSCIAYHECIYV 542 (712)
Q Consensus 472 ~~--~~~~p~~r~~~~~~--~~~---~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~-~~p~~r~~~~~~~~~~~iyv 542 (712)
.. ...+........++ .-+ +++++.|+.+ ..+.+||..+.+.... . ... ......+.. ++.+++
T Consensus 184 ~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~h~-~~v~~~~~s-d~~~l~ 256 (450)
T 2vdu_B 184 EKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----EHIKISHYPQCFIVDKWLFGHK-HFVSSICCG-KDYLLL 256 (450)
T ss_dssp SSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----SCEEEEEESCTTCEEEECCCCS-SCEEEEEEC-STTEEE
T ss_pred ccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----CcEEEEECCCCceeeeeecCCC-CceEEEEEC-CCCEEE
Confidence 21 11111111111222 226 7788888765 3578888776653322 1 111 111122222 677777
Q ss_pred EcCCCCCCccceEEEEeCCCCcEE
Q psy14726 543 IGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 543 ~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
.|+.+ ..+..||..+.+..
T Consensus 257 s~~~d-----~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 257 SAGGD-----DKIFAWDWKTGKNL 275 (450)
T ss_dssp EEESS-----SEEEEEETTTCCEE
T ss_pred EEeCC-----CeEEEEECCCCcEe
Confidence 77754 57889998887643
No 209
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.96 E-value=1.7 Score=43.81 Aligned_cols=229 Identities=8% Similarity=0.054 Sum_probs=111.3
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
..++.|+.+ ..+..||..+........... ....-.+++.. ++..++.|+.+ ..+..||..+++....
T Consensus 55 ~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 55 NFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGSKVFTASCD-----KTAKMWDLSSNQAIQI 123 (368)
T ss_dssp EEEEEEETT-----SEEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred eEEEEECCC-----CcEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCCEEEEEcCC-----CcEEEEEcCCCCceee
Confidence 566666643 357788877522221000000 01112233333 56666777753 3688999998886654
Q ss_pred CCCCCCcceeEEEE---ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCc
Q psy14726 428 APMNFKRCYVSTAV---HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNC 504 (712)
Q Consensus 428 ~~~~~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 504 (712)
.....+ -.+++. .++.+++.|+.+ ..+..||..+.+-... +.......+.......+++.++ +
T Consensus 124 ~~~~~~--v~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~---- 189 (368)
T 3mmy_A 124 AQHDAP--VKTIHWIKAPNYSCVMTGSWD-----KTLKFWDTRSSNPMMV--LQLPERCYCADVIYPMAVVATA-E---- 189 (368)
T ss_dssp EECSSC--EEEEEEEECSSCEEEEEEETT-----SEEEEECSSCSSCSEE--EECSSCEEEEEEETTEEEEEEG-G----
T ss_pred ccccCc--eEEEEEEeCCCCCEEEEccCC-----CcEEEEECCCCcEEEE--EecCCCceEEEecCCeeEEEeC-C----
Confidence 332211 122332 356777777754 4688899877653221 1122222333344555554433 2
Q ss_pred cCceEEeeCCCCe--eEEeCCCCCCCcceEEEEECC----EEEEEcCCCCCCccceEEEEeCCCCcE-----EEcC--CC
Q psy14726 505 LNSCEVYDPECNQ--WTLIEPMRHRRSGVSCIAYHE----CIYVIGGFNGMSRMCNGEKYNPVTKTW-----SQVP--DM 571 (712)
Q Consensus 505 ~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~----~iyv~GG~~~~~~~~~v~~yd~~~~~W-----~~~~--~~ 571 (712)
..+..||..... +..+...............+. ..++.|+.+ ..+..||.....- .... ..
T Consensus 190 -~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-----g~i~i~~~~~~~~~~~~~~~~~~~~~ 263 (368)
T 3mmy_A 190 -RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIE-----GRVAIHYINPPNPAKDNFTFKCHRSN 263 (368)
T ss_dssp -GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETT-----SEEEEEESSCSCHHHHSEEEECSEEC
T ss_pred -CcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCC-----CcEEEEecCCCCccccceeeeeeecc
Confidence 356777776543 433332211111122222221 235666543 5677788765421 1110 00
Q ss_pred --CCCcc----ceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 572 --YNPRS----NFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 572 --p~~r~----~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
..... ....+.+ ++.+++.||.++ .+.+||..+.+-.
T Consensus 264 ~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg-----~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG-----RFSFWDKDARTKL 308 (368)
T ss_dssp ----CCCEEECCEEEEEECTTTCCEEEEETTS-----CEEEEETTTTEEE
T ss_pred cccccccccccceEEEEEecCCCEEEEEccCC-----eEEEEECCCCcEE
Confidence 00000 1222233 677888888765 5889998876543
No 210
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.92 E-value=3.9 Score=42.62 Aligned_cols=225 Identities=12% Similarity=0.098 Sum_probs=106.8
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
+..++.|+.+ ..|..+|..+++-... ... ......+...++.+++.|+.+ ..+..+|.........
T Consensus 159 g~~lasgs~D-----g~v~iWd~~~~~~~~~--~~~--h~~~v~~~s~~~~~l~sgs~d-----~~i~~~d~~~~~~~~~ 224 (420)
T 4gga_A 159 GNYLAVGTSS-----AEVQLWDVQQQKRLRN--MTS--HSARVGSLSWNSYILSSGSRS-----GHIHHHDVRVAEHHVA 224 (420)
T ss_dssp SSEEEEEETT-----SCEEEEETTTTEEEEE--ECC--CSSCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEE
T ss_pred CCEEEEEECC-----CeEEEEEcCCCcEEEE--EeC--CCCceEEEeeCCCEEEEEeCC-----CceeEeeecccceeeE
Confidence 4455666642 3578889888765442 111 112223333466777777753 3567777665443211
Q ss_pred C-CCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEcccCCccccceeEEEE---CCEEEEE-cccC
Q psy14726 428 A-PMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNVERSDASATTL---QGKIYIT-GGFN 500 (712)
Q Consensus 428 ~-~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~---~~~iyv~-GG~~ 500 (712)
. ..............++..++.||.+ +.+.++|..+.+ +..+...........+... +..+++. ||..
T Consensus 225 ~~~~h~~~~~~~~~~~~g~~l~s~~~D-----~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~ 299 (420)
T 4gga_A 225 TLSGHSQEVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 299 (420)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTT
T ss_pred EecccccceeeeeecCCCCeeeeeecc-----ccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecC
Confidence 1 1111111112222355666666643 346667665543 1111111111111122222 3444444 4433
Q ss_pred CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccce
Q psy14726 501 GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNF 578 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 578 (712)
+ ..+..||..+++-...-..... ..+++.. ++.+++.+|.. -..+.+||..+.+ .+..+......-
T Consensus 300 D----~~I~iwd~~t~~~~~~~~~~~~--v~~~~~~~~~~~lv~~sg~~----d~~I~iwd~~~~~--~v~~l~gH~~~V 367 (420)
T 4gga_A 300 D----RHIRIWNVCSGACLSAVDAHSQ--VCSILWSPHYKELISGHGFA----QNQLVIWKYPTMA--KVAELKGHTSRV 367 (420)
T ss_dssp T----CEEEEEETTTTEEEEEEECSSC--EEEEEEETTTTEEEEEECTT----TCCEEEEETTTCC--EEEEECCCSSCE
T ss_pred C----CEEEEEeCCccccceeeccccc--eeeeeecCCCCeEEEEEecC----CCEEEEEECCCCc--EEEEEcCCCCCE
Confidence 2 4688899888764433222221 1222222 45666665643 2468889987653 222222111111
Q ss_pred EEEEE--CCEEEEEcccCCCceeeeEEEEECC
Q psy14726 579 AIEVI--DDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 579 ~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
..+.+ ++..++.||.++ .|.+||..
T Consensus 368 ~~l~~spdg~~l~S~s~D~-----tvriWdv~ 394 (420)
T 4gga_A 368 LSLTMSPDGATVASAAADE-----TLRLWRCF 394 (420)
T ss_dssp EEEEECTTSSCEEEEETTT-----EEEEECCS
T ss_pred EEEEEcCCCCEEEEEecCC-----eEEEEECC
Confidence 22223 678888888776 46666654
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.81 E-value=3.8 Score=41.15 Aligned_cols=188 Identities=8% Similarity=-0.066 Sum_probs=99.3
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEE-EEECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVST-AVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~-~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++.+|+++.. ...+++||+.+++...+.. +. .-.++ ..-+|++++... ..+++||+.+.+.+.+
T Consensus 60 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~-~~--~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 60 SGTAWWFNIL-----ERELHELHLASGRKTVHAL-PF--MGSALAKISDSKQLIASD-------DGLFLRDTATGVLTLH 124 (326)
T ss_dssp TTEEEEEEGG-----GTEEEEEETTTTEEEEEEC-SS--CEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEEC-CC--cceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEEE
Confidence 3678877643 2468999999887655432 21 22233 335788887542 3599999999988776
Q ss_pred ccCCccc--cceeEEEE--CCEEEEEcccC-CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC-EEEEEcCCC
Q psy14726 475 APMNVER--SDASATTL--QGKIYITGGFN-GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFN 547 (712)
Q Consensus 475 ~~~p~~r--~~~~~~~~--~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~ 547 (712)
...+... .......+ +|++|+..... .......+++|| +++.+.+..- .. ...+.+.. ++ .+|+....
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~-~~-~~~~i~~s~dg~~lyv~~~~- 199 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD-IS-IPNSICFSPDGTTGYFVDTK- 199 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE-ES-SEEEEEECTTSCEEEEEETT-
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC-Cc-ccCCeEEcCCCCEEEEEECC-
Confidence 5443211 11222233 67888743211 112345789998 4666554210 01 11223332 34 58887532
Q ss_pred CCCccceEEEEeCC--CC-c------EEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEE
Q psy14726 548 GMSRMCNGEKYNPV--TK-T------WSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 548 ~~~~~~~v~~yd~~--~~-~------W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 614 (712)
...+++||.. +. . +..+... ...-.+++.- ++.+|+....+ ..+.+||+....-..
T Consensus 200 ----~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~--~~~p~gi~~d~~G~lwva~~~~-----~~v~~~d~~g~~~~~ 265 (326)
T 2ghs_A 200 ----VNRLMRVPLDARTGLPTGKAEVFIDSTGI--KGGMDGSVCDAEGHIWNARWGE-----GAVDRYDTDGNHIAR 265 (326)
T ss_dssp ----TCEEEEEEBCTTTCCBSSCCEEEEECTTS--SSEEEEEEECTTSCEEEEEETT-----TEEEEECTTCCEEEE
T ss_pred ----CCEEEEEEcccccCCcccCceEEEECCCC--CCCCCeeEECCCCCEEEEEeCC-----CEEEEECCCCCEEEE
Confidence 3578999875 43 2 3222211 1111223322 56777763211 268999996544333
No 212
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=94.80 E-value=0.0049 Score=50.96 Aligned_cols=85 Identities=16% Similarity=0.284 Sum_probs=61.4
Q ss_pred EEEEecCCcEEeceeeeecccCHHHHHhhcCCC----CcCCccceEEcCCCCHHHHHHHhhhhccCceecChh-hHHHHH
Q psy14726 95 ATIVLADNSHFPIHRNILCACSDYFRALFTTSL----HDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITED-NVASLL 169 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~----~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~i~~~-~~~~ll 169 (712)
|+|.| +|+.|...+..|..... .||.... ..... .++.| |=++..|+.||+|+-+|++.++.+ .+..++
T Consensus 2 V~LNV-GG~~f~t~~~TL~~~p~---s~L~~~~~~~~~~~~~-~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 2 IVLNV-SGTRFQTWQDTLERYPD---TLLGSSERDFFYHPET-QQYFF-DRDPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp EEEEE-TTEEEEECHHHHHTSCS---SSTTSGGGGGGEEGGG-TEEEE-CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred EEEEE-CCEEEEEeHHHHhcCCC---ccccccCCcccccCCC-CcEEE-eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 78899 99999999998876532 2333310 11123 56666 469999999999999999887654 478899
Q ss_pred HHhhhcChHHHH-HHHH
Q psy14726 170 LATDFFCMSKAQ-DLCC 185 (712)
Q Consensus 170 ~~A~~~~i~~L~-~~c~ 185 (712)
+-|++|+|+.+. +.|+
T Consensus 76 ~Ea~fy~i~~l~~~~cc 92 (105)
T 1nn7_A 76 EELAFFGLIPEIIGDCC 92 (105)
T ss_dssp HHHHHHTCCSCCBCHHH
T ss_pred HHHHHcCCCHHHHHHHH
Confidence 999999998763 4443
No 213
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=94.73 E-value=4 Score=41.08 Aligned_cols=150 Identities=9% Similarity=0.135 Sum_probs=78.5
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeE-
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT- 519 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~- 519 (712)
++..++.|+.+ ..+..||..+.+-........... ..++.+ ++.+++.|+.++ .+..||..+.+-.
T Consensus 138 ~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~~~~~~~-i~~~~~~pdg~~lasg~~dg-----~i~iwd~~~~~~~~ 206 (343)
T 3lrv_A 138 NTEYFIWADNR-----GTIGFQSYEDDSQYIVHSAKSDVE-YSSGVLHKDSLLLALYSPDG-----ILDVYNLSSPDQAS 206 (343)
T ss_dssp -CCEEEEEETT-----CCEEEEESSSSCEEEEECCCSSCC-CCEEEECTTSCEEEEECTTS-----CEEEEESSCTTSCC
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcEEEEEecCCCCc-eEEEEECCCCCEEEEEcCCC-----EEEEEECCCCCCCc
Confidence 56777777754 458899988877644332222211 222333 678888888664 5888998877532
Q ss_pred -EeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEE-EcCCCCCC--ccceEEEEE--CCEEEEEc
Q psy14726 520 -LIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWS-QVPDMYNP--RSNFAIEVI--DDMIFAIG 591 (712)
Q Consensus 520 -~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~--r~~~~~~~~--~~~i~v~G 591 (712)
.+.. ... .....+.+ ++..++.|+ + +.+..||..+.+-. .+...... .....++.+ +++.++.|
T Consensus 207 ~~~~~-~h~-~~v~~l~fs~~g~~l~s~~-~-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 278 (343)
T 3lrv_A 207 SRFPV-DEE-AKIKEVKFADNGYWMVVEC-D-----QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAY 278 (343)
T ss_dssp EECCC-CTT-SCEEEEEECTTSSEEEEEE-S-----SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEE
T ss_pred cEEec-cCC-CCEEEEEEeCCCCEEEEEe-C-----CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEe
Confidence 2211 111 22222333 566666666 2 27889998765311 11111000 011012333 56666665
Q ss_pred cc-CCCceeeeEEEEECCCCeEEE
Q psy14726 592 GF-NGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 592 G~-~~~~~~~~v~~yd~~~~~W~~ 614 (712)
+. ++ . -.+|-|+.....|..
T Consensus 279 s~~d~-~--i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 279 SNESN-S--LTIYKFDKKTKNWTK 299 (343)
T ss_dssp ETTTT-E--EEEEEECTTTCSEEE
T ss_pred cCCCC-c--EEEEEEcccccceEe
Confidence 54 33 1 245555567788987
No 214
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.72 E-value=3.6 Score=42.61 Aligned_cols=233 Identities=10% Similarity=0.057 Sum_probs=123.9
Q ss_pred EEEEECCC--CcEEEcccCCCCCCCcceEEEEE---CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCC---CCC--c
Q psy14726 365 VETYDTRA--DRWVKIEQVDPMGPRAYHGTAVI---GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPM---NFK--R 434 (712)
Q Consensus 365 v~~~d~~~--~~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---~~~--r 434 (712)
+..++... ..|..+.. . .....-+++++. ++.||+.+.... .-..+++.+....+|+.+... +.. +
T Consensus 33 l~~~~~~~~g~~W~~~~~-~-~~~~~v~~i~~dp~~~~~l~~g~~~g~--~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~ 108 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGP-V-FLGHTIHHIVQDPREPERMLMAARTGH--LGPTVFRSDDGGGNWTEATRPPAFNKAPEG 108 (394)
T ss_dssp EEEEEECTTSCSEEEEEE-E-STTSEEEEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCCCCCC--
T ss_pred eEEEECCCCCCCceECCc-c-CCCCceEEEEECCCCCCeEEEEecCCC--CCccEEEeCCCCCCceECCccccCCCcccc
Confidence 66676554 68987421 1 112223444443 467887654211 112578888888899988642 211 1
Q ss_pred -------ceeEEEEE----CCeEEEEcccCCCCCCceeEEeecCCCceEEcccC---Ccc--------------ccceeE
Q psy14726 435 -------CYVSTAVH----HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM---NVE--------------RSDASA 486 (712)
Q Consensus 435 -------~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---p~~--------------r~~~~~ 486 (712)
.-.+++.- .+.||+.+. ...+++.+-...+|+.+... |.. ..-+++
T Consensus 109 ~~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i 182 (394)
T 3b7f_A 109 ETGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSI 182 (394)
T ss_dssp --CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEE
T ss_pred cccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEE
Confidence 11233333 567887542 13588888888999988542 211 111222
Q ss_pred EEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCC------CCC-----CcceEEEEEC---CEEEEEcCCCCC
Q psy14726 487 TTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPM------RHR-----RSGVSCIAYH---ECIYVIGGFNGM 549 (712)
Q Consensus 487 ~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~------p~~-----r~~~~~~~~~---~~iyv~GG~~~~ 549 (712)
+.- .+.||+..+. ..+++.+-...+|+.+..- |.+ ...+.++... +.||+..+
T Consensus 183 ~~d~~~~~~l~vg~~~------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~---- 252 (394)
T 3b7f_A 183 LVDPRDPKHLYIGMSS------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH---- 252 (394)
T ss_dssp EECTTCTTCEEEEEET------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET----
T ss_pred EECCCCCCEEEEEECC------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC----
Confidence 222 2568876432 2377887778899988531 211 1233444332 67777532
Q ss_pred CccceEEEEeCCCCcEEEcCC-CCCC--ccceEEEEE---CCEEEEEcccCCC-------ceeeeEEEEECCCCeEEEcc
Q psy14726 550 SRMCNGEKYNPVTKTWSQVPD-MYNP--RSNFAIEVI---DDMIFAIGGFNGV-------TTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 550 ~~~~~v~~yd~~~~~W~~~~~-~p~~--r~~~~~~~~---~~~i~v~GG~~~~-------~~~~~v~~yd~~~~~W~~~~ 616 (712)
..+++.+-...+|+.+.. +|.. .....++.. .+.||+.....+. .....+++-.-...+|+.+.
T Consensus 253 ---~gl~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~ 329 (394)
T 3b7f_A 253 ---CGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQD 329 (394)
T ss_dssp ---TEEEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEEC
T ss_pred ---CeEEEeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECC
Confidence 458888888899999854 4432 223334332 4667776311110 00112333333346899874
Q ss_pred -CCCC
Q psy14726 617 -DMNI 620 (712)
Q Consensus 617 -~~p~ 620 (712)
.+|.
T Consensus 330 ~glp~ 334 (394)
T 3b7f_A 330 RGLPT 334 (394)
T ss_dssp BTSCC
T ss_pred CCCCC
Confidence 3554
No 215
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.70 E-value=3.9 Score=40.81 Aligned_cols=238 Identities=9% Similarity=-0.052 Sum_probs=118.6
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+.+++.+.. ...+..||+.++++..+... ....-.+++.. ++.+|+.+.... .....+++||+.++....
T Consensus 56 g~l~~~~~~-----~~~i~~~d~~~~~~~~~~~~---~~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 56 GQLFLLDVF-----EGNIFKINPETKEIKRPFVS---HKANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAATENGDNLQD 126 (333)
T ss_dssp SCEEEEETT-----TCEEEEECTTTCCEEEEEEC---SSSSEEEEEECTTSCEEEEECTTS-SSCCEEEEECTTSCSCEE
T ss_pred CCEEEEECC-----CCEEEEEeCCCCcEEEEeeC---CCCCcceEEECCCCcEEEEeCCCC-CCCceEEEEeCCCCEEEE
Confidence 456665532 24688999988887664211 12223444444 677887654221 122479999999887653
Q ss_pred e-CCCCCCcceeEEEE-ECCeEEEEcccC-CCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CC-EEEEEcccC
Q psy14726 427 I-APMNFKRCYVSTAV-HHDVIYAMGGYN-GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QG-KIYITGGFN 500 (712)
Q Consensus 427 ~-~~~~~~r~~~~~~~-~~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~ 500 (712)
+ ........-..++. -+|++|+..... .......++++|+.+.+...+..- ........+ ++ .+|+....
T Consensus 127 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~i~~~~dg~~l~v~~~~- 202 (333)
T 2dg1_A 127 IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN---ISVANGIALSTDEKVLWVTETT- 202 (333)
T ss_dssp EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE---ESSEEEEEECTTSSEEEEEEGG-
T ss_pred EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC---CCcccceEECCCCCEEEEEeCC-
Confidence 3 32222222223333 367888864321 112245799999988776654321 011122233 44 58886532
Q ss_pred CCCccCceEEeeCCCC--eeEEeC-----CCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCC
Q psy14726 501 GHNCLNSCEVYDPECN--QWTLIE-----PMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMY 572 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~--~W~~~~-----~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 572 (712)
.+.+++||+.++ ....+. ..+....-.+++.. ++.||+.... ...+.+||++...-..+. .+
T Consensus 203 ----~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~-----~~~v~~~d~~g~~~~~~~-~~ 272 (333)
T 2dg1_A 203 ----ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG-----QGRVLVFNKRGYPIGQIL-IP 272 (333)
T ss_dssp ----GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET-----TTEEEEECTTSCEEEEEE-CT
T ss_pred ----CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC-----CCEEEEECCCCCEEEEEE-cC
Confidence 246888988542 232211 11111111222222 5778887532 247889999655444442 22
Q ss_pred CCc-----cceEEEEE-C-CEEEEEcccCCCceeeeEEEEECC
Q psy14726 573 NPR-----SNFAIEVI-D-DMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 573 ~~r-----~~~~~~~~-~-~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
... ...+++.- + +.||+.+..........++.+++.
T Consensus 273 ~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 273 GRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp TGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred CCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 110 11223332 3 467765433221122356777654
No 216
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.68 E-value=0.87 Score=46.82 Aligned_cols=213 Identities=9% Similarity=-0.010 Sum_probs=103.1
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..+..+|........+..... ....-.+++.. ++..++.|+.+ ..+..||........+..-. ..-.+++.
T Consensus 141 ~~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~h~--~~v~~~~~ 212 (383)
T 3ei3_B 141 GATTLRDFSGSVIQVFAKTDS-WDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKLHK--AKVTHAEF 212 (383)
T ss_dssp TEEEEEETTSCEEEEEECCCC-SSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEECSS--SCEEEEEE
T ss_pred CEEEEEECCCCceEEEeccCC-CCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEeccCC--CcEEEEEE
Confidence 467888988776665432211 11122333333 56677777754 46889998554444332211 11122333
Q ss_pred E-CCe-EEEEcccCCCCCCceeEEeecCC----CceEEcccCCccccceeEEEE---CCEEEEEcccCCCCccCceEEee
Q psy14726 442 H-HDV-IYAMGGYNGQRRQNSVEKYNYTE----NQWSLIAPMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYD 512 (712)
Q Consensus 442 ~-~~~-iyv~GG~~~~~~~~~v~~yd~~~----~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd 512 (712)
. ++. +++.|+.+ ..+..||..+ ......- ... .....+.+ ++..++.|+.+ ..+..||
T Consensus 213 ~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~--~~~-~~v~~~~~s~~~~~~l~~~~~d-----~~i~iwd 279 (383)
T 3ei3_B 213 NPRCDWLMATSSVD-----ATVKLWDLRNIKDKNSYIAEM--PHE-KPVNAAYFNPTDSTKLLTTDQR-----NEIRVYS 279 (383)
T ss_dssp CSSCTTEEEEEETT-----SEEEEEEGGGCCSTTCEEEEE--ECS-SCEEEEEECTTTSCEEEEEESS-----SEEEEEE
T ss_pred CCCCCCEEEEEeCC-----CEEEEEeCCCCCcccceEEEe--cCC-CceEEEEEcCCCCCEEEEEcCC-----CcEEEEE
Confidence 2 344 77777753 4688899877 3332211 111 11222232 56777777755 3577888
Q ss_pred CCCCee--EEe--CCC------CC-----CCcceEEE--EECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCc
Q psy14726 513 PECNQW--TLI--EPM------RH-----RRSGVSCI--AYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPR 575 (712)
Q Consensus 513 ~~~~~W--~~~--~~~------p~-----~r~~~~~~--~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 575 (712)
..+.+- +.. ... +. +.....++ .-++++ .|+. -..+..||..+.+....-..+...
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~-----d~~i~iwd~~~~~~~~~l~~~~~~ 352 (383)
T 3ei3_B 280 SYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLND-----KRTIDIYDANSGGLVHQLRDPNAA 352 (383)
T ss_dssp TTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTC-----CCCEEEEETTTCCEEEEECBTTBC
T ss_pred CCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCC-----CCeEEEEecCCCceeeeecCCCCC
Confidence 765431 111 000 00 00111111 113333 3332 357889999877653332211111
Q ss_pred cceEEEEE--CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 576 SNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 576 ~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
....++.+ ++++++.|+ ++ .+.+||+++
T Consensus 353 ~~~~~~~~s~~g~~l~s~s-d~-----~i~iw~~~~ 382 (383)
T 3ei3_B 353 GIISLNKFSPTGDVLASGM-GF-----NILIWNRED 382 (383)
T ss_dssp SCCCEEEECTTSSEEEEEE-TT-----EEEEEECC-
T ss_pred ceEEEEEEecCccEEEEec-CC-----cEEEEecCC
Confidence 11222222 677777775 33 578888764
No 217
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=94.65 E-value=3.3 Score=43.78 Aligned_cols=212 Identities=14% Similarity=0.143 Sum_probs=114.4
Q ss_pred CceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCc---
Q psy14726 347 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV--- 423 (712)
Q Consensus 347 ~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--- 423 (712)
.+.++++.| +..+.||..++......-+.+| .. -++....+++|+|-| +..|+||+.+.+
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~gi~--~i-DAA~~~~g~~YfFkG-------~~y~rfd~~~~~v~~ 220 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSWPAVG--NC-TSALRWLGRYYCFQG-------NQFLRFNPVSGEVPP 220 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECCTTSC--CC-SEEEEETTEEEEEET-------TEEEEECTTTCCCCT
T ss_pred CCeEEEEec-------ccEEEEecccceeecccCCCCC--cc-chheeeCCceEEEEC-------CEEEEEcCccCcccC
Confidence 345566665 3578899887765432112222 22 233334789999988 467888876654
Q ss_pred ---------EEEeCCCC------------------CCc-ceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceE--
Q psy14726 424 ---------WKEIAPMN------------------FKR-CYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWS-- 472 (712)
Q Consensus 424 ---------W~~~~~~~------------------~~r-~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-- 472 (712)
|..++... .+. .--+++. .+|++|+|-| +..|++|.....+.
T Consensus 221 gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg-------~~yWR~~~~~~~~~p~ 293 (460)
T 1qhu_A 221 GYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSW 293 (460)
T ss_dssp TCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET-------TEEEECTTGGGCCCCE
T ss_pred CCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC-------CEEEEEecCCCCcCcc
Confidence 22222110 011 1223333 4689999977 45777776543321
Q ss_pred Ec----ccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC----------CCCCC--CcceEEEEE
Q psy14726 473 LI----APMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE----------PMRHR--RSGVSCIAY 536 (712)
Q Consensus 473 ~~----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~----------~~p~~--r~~~~~~~~ 536 (712)
.+ +.+|.. --++...++++|+|=| +.+++|+..++ .+..+ .+|.. ....-++..
T Consensus 294 ~Is~~WpglP~~--IDAAf~~~~~~yfFkG-------~~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~ 363 (460)
T 1qhu_A 294 PIAHQWPQGPST--VDAAFSWEDKLYLIQD-------TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFV 363 (460)
T ss_dssp EGGGTCTTSCSS--CSEEEEETTEEEEEET-------TEEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEEC
T ss_pred chhhhccCCCCC--CcEEEEECCeEEEEeC-------CEEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEEEE
Confidence 11 223322 2344455889999976 45888876431 22222 12222 122223332
Q ss_pred ---CCEEEEEcCCCCCCccceEEEEeCCCC---cEEEcCCCCCCccceEEEE------------ECCEEEEEcccCCCce
Q psy14726 537 ---HECIYVIGGFNGMSRMCNGEKYNPVTK---TWSQVPDMYNPRSNFAIEV------------IDDMIFAIGGFNGVTT 598 (712)
Q Consensus 537 ---~~~iyv~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~------------~~~~i~v~GG~~~~~~ 598 (712)
++++|++-| +..|+||.... .|...+..|. .. .++.. .++.+|++-|.
T Consensus 364 ~~~~~ktyfFkG-------~~ywryd~~~~Pr~i~~~~~gi~~-~v-dAaf~~~~~~~~~~~~~~~~~~yfF~g~----- 429 (460)
T 1qhu_A 364 CPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELPWPHE-KV-DGALCMEKPLGPNSCSTSGPNLYLIHGP----- 429 (460)
T ss_dssp CTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEECCSCS-CC-SEEEEESSCSSSCCSCSSSCEEEEEETT-----
T ss_pred eCCCCEEEEEEC-------CEEEEEECCCCccchhhhCCCCCC-Cc-CEEEecccccCcccccccCCeEEEEECC-----
Confidence 589999988 57889987632 2222222221 22 23333 45778888663
Q ss_pred eeeEEEEECC
Q psy14726 599 IYHVECYDEK 608 (712)
Q Consensus 599 ~~~v~~yd~~ 608 (712)
..+.||..
T Consensus 430 --~y~~~~~~ 437 (460)
T 1qhu_A 430 --NLYCYRHV 437 (460)
T ss_dssp --EEEEESSH
T ss_pred --EEEEEcCh
Confidence 56777754
No 218
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.63 E-value=0.58 Score=47.16 Aligned_cols=153 Identities=14% Similarity=0.095 Sum_probs=78.7
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECC-eEEEEcccCCCCCCceeEEeecCCCceEE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHD-VIYAMGGYNGQRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 473 (712)
++.+|+.++. ...++.+|+.+++....-+.+.....+.++. -++ .+|+.++. ...+++||+.+.+-..
T Consensus 10 ~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 10 GHEYMIVTNY-----PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH-----YGDIYGIDLDTCKNTF 79 (349)
T ss_dssp TCEEEEEEET-----TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEE
T ss_pred CCEEEEEeCC-----CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC-----CCcEEEEeCCCCcEEE
Confidence 5678888774 3579999999987654333332111233333 344 57776532 2579999998877543
Q ss_pred cccCCc-----cccceeEEEE-CC-EEEEEccc---CCC---CccCceEEeeCCCCeeEE-eCCCCCCCcceEE-EEECC
Q psy14726 474 IAPMNV-----ERSDASATTL-QG-KIYITGGF---NGH---NCLNSCEVYDPECNQWTL-IEPMRHRRSGVSC-IAYHE 538 (712)
Q Consensus 474 ~~~~p~-----~r~~~~~~~~-~~-~iyv~GG~---~~~---~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~-~~~~~ 538 (712)
.-..+. ...-..++.- ++ .+|+.+.. ... .....+.+||+.+++-.. +...+.++.-.++ ..-++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 159 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC
Confidence 322221 1111222222 44 55555421 000 012578999987743211 1111112222222 22356
Q ss_pred EEEEEcCCCCCCccceEEEEeCCCCcEE
Q psy14726 539 CIYVIGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 539 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
++|+.++ ++.++|+.+.+-.
T Consensus 160 ~l~~~~~--------~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 160 SLYVAGP--------DIYKMDVKTGKYT 179 (349)
T ss_dssp CEEEESS--------SEEEECTTTCCEE
T ss_pred cEEEccC--------cEEEEeCCCCcee
Confidence 6777543 3888888776544
No 219
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.60 E-value=1.4 Score=48.33 Aligned_cols=190 Identities=10% Similarity=0.033 Sum_probs=96.4
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCC----c-EEEeCCCCCCcceeEEEE-E--CCeEEEEcccCCCCCCceeEEeecC
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTK----V-WKEIAPMNFKRCYVSTAV-H--HDVIYAMGGYNGQRRQNSVEKYNYT 467 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~----~-W~~~~~~~~~r~~~~~~~-~--~~~iyv~GG~~~~~~~~~v~~yd~~ 467 (712)
++..+++|+ + ..+..||..+. + -..+..-. ...-.+++. - +++.++.|+.+ ..+.+||..
T Consensus 29 dg~~l~~~~-~-----~~v~v~~~~~~~~~~~~~~~~~~h~-~~~v~~~~~sp~~~~~~l~s~~~d-----g~v~vw~~~ 96 (615)
T 1pgu_A 29 TTNAIAYPC-G-----KSAFVRCLDDGDSKVPPVVQFTGHG-SSVVTTVKFSPIKGSQYLCSGDES-----GKVIVWGWT 96 (615)
T ss_dssp TTTEEEEEE-T-----TEEEEEECCSSCCSSCSEEEECTTT-TSCEEEEEECSSTTCCEEEEEETT-----SEEEEEEEE
T ss_pred CCCEEEEec-C-----CeEEEEECCCCCCccccceEEecCC-CceEEEEEECcCCCCCEEEEecCC-----CEEEEEeCC
Confidence 566666666 1 36889998876 3 22222211 110223333 3 66788887753 468888876
Q ss_pred CC------ceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--C
Q psy14726 468 EN------QWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--H 537 (712)
Q Consensus 468 ~~------~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 537 (712)
+. ....+..+...........+ +++.++.+|.+.. ....++.+|... .-.. +.........+.+ +
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-~~~~v~~~d~~~-~~~~---~~~~~~~v~~~~~~~~ 171 (615)
T 1pgu_A 97 FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRD-NFGVFISWDSGN-SLGE---VSGHSQRINACHLKQS 171 (615)
T ss_dssp EEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSS-CSEEEEETTTCC-EEEE---CCSCSSCEEEEEECSS
T ss_pred CCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCC-CccEEEEEECCC-ccee---eecCCccEEEEEECCC
Confidence 54 33333333222222223333 5666666664431 234677777332 1111 2211122222222 3
Q ss_pred CE-EEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCcc---ceEEEEE--C-CEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 538 EC-IYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRS---NFAIEVI--D-DMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 538 ~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~---~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
+. +++.|+.+ ..+..||..+.+-... +..... ....+.+ + +..++.|+.++ .+.+||..++
T Consensus 172 ~~~~l~~~~~d-----~~v~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~ 239 (615)
T 1pgu_A 172 RPMRSMTVGDD-----GSVVFYQGPPFKFSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSDR-----KISCFDGKSG 239 (615)
T ss_dssp SSCEEEEEETT-----TEEEEEETTTBEEEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETTC-----CEEEEETTTC
T ss_pred CCcEEEEEeCC-----CcEEEEeCCCcceeee--ecccCCCCceEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 33 66667653 5788899776543322 111111 2223333 5 77888888765 5788898876
Q ss_pred eEEE
Q psy14726 611 EWYE 614 (712)
Q Consensus 611 ~W~~ 614 (712)
+...
T Consensus 240 ~~~~ 243 (615)
T 1pgu_A 240 EFLK 243 (615)
T ss_dssp CEEE
T ss_pred CEeE
Confidence 6543
No 220
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.59 E-value=2.8 Score=41.15 Aligned_cols=190 Identities=9% Similarity=-0.044 Sum_probs=101.7
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
+.+|+++.. ...+++||+.++ ...+... . ..-.+++. -+|++|+.... ...+.+||+.+.+...+.
T Consensus 40 ~~l~~~~~~-----~~~i~~~~~~~~-~~~~~~~-~-~~~~~l~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 40 SAVIFSDVR-----QNRTWAWSDDGQ-LSPEMHP-S-HHQNGHCLNKQGHLIACSHG-----LRRLERQREPGGEWESIA 106 (296)
T ss_dssp TEEEEEEGG-----GTEEEEEETTSC-EEEEESS-C-SSEEEEEECTTCCEEEEETT-----TTEEEEECSTTCCEEEEE
T ss_pred CEEEEEeCC-----CCEEEEEECCCC-eEEEECC-C-CCcceeeECCCCcEEEEecC-----CCeEEEEcCCCCcEEEEe
Confidence 457877753 246899999988 6555332 1 12234443 36788876431 256999999888877663
Q ss_pred cCCcc----ccceeEEEECCEEEEE----cccCC--------CCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC
Q psy14726 476 PMNVE----RSDASATTLQGKIYIT----GGFNG--------HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE 538 (712)
Q Consensus 476 ~~p~~----r~~~~~~~~~~~iyv~----GG~~~--------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~ 538 (712)
..... +....+..-+|++|+. |.... ......+++||+. ++...+..-. ..-.+++.. ++
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~--~~~~gi~~s~dg 183 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR--VKPNGLAFLPSG 183 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC--SSEEEEEECTTS
T ss_pred eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC--CCCccEEECCCC
Confidence 32111 1111222227889987 43210 1113479999987 5555443211 111223322 56
Q ss_pred EEEEEcCCCCCCccceEEEEeCC-CCcE-E--EcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 539 CIYVIGGFNGMSRMCNGEKYNPV-TKTW-S--QVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 539 ~iyv~GG~~~~~~~~~v~~yd~~-~~~W-~--~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
++++.+.. ...+++||+. +.+. . .+-..... .-.+++.- +|.||+.. + ..+.+||++.....
T Consensus 184 ~~lv~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~-~p~~i~~d~~G~l~v~~--~-----~~v~~~~~~g~~~~ 250 (296)
T 3e5z_A 184 NLLVSDTG-----DNATHRYCLNARGETEYQGVHFTVEPG-KTDGLRVDAGGLIWASA--G-----DGVHVLTPDGDELG 250 (296)
T ss_dssp CEEEEETT-----TTEEEEEEECSSSCEEEEEEEECCSSS-CCCSEEEBTTSCEEEEE--T-----TEEEEECTTSCEEE
T ss_pred CEEEEeCC-----CCeEEEEEECCCCcCcCCCeEeeCCCC-CCCeEEECCCCCEEEEc--C-----CeEEEECCCCCEEE
Confidence 65555432 3578899886 4555 1 11111111 11123332 77888876 1 36899999865544
Q ss_pred Ec
Q psy14726 614 EA 615 (712)
Q Consensus 614 ~~ 615 (712)
.+
T Consensus 251 ~~ 252 (296)
T 3e5z_A 251 RV 252 (296)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 221
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=94.57 E-value=6 Score=44.96 Aligned_cols=240 Identities=11% Similarity=-0.001 Sum_probs=123.2
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCC---------CccceEEEEECCCCcE--EEeCCC
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGN---------EYYNSCRCFNAVTKVW--KEIAPM 430 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~---------~~~~~v~~yd~~~~~W--~~~~~~ 430 (712)
..++.+|..+++........ .. ..+.+.. + +-++++..+.. .....++.++..++.- ..+...
T Consensus 189 ~~i~v~dl~tg~~~~~~~~~---~~-~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~ 263 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADELKW---VK-FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFAT 263 (741)
T ss_dssp EEEEEEETTTCCEEEEEEEE---EE-SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECC
T ss_pred EEEEEEECCCCCCCCccCCC---ce-eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEecc
Confidence 46888999888876531100 00 0112222 4 33334433222 1245688888876652 122111
Q ss_pred C-CCcceeEEE-EECCeEEEEcccCCCCCCceeEEeecCCC--c-eEEcccCCccccceeEEEECCEEEEEcccCCCCcc
Q psy14726 431 N-FKRCYVSTA-VHHDVIYAMGGYNGQRRQNSVEKYNYTEN--Q-WSLIAPMNVERSDASATTLQGKIYITGGFNGHNCL 505 (712)
Q Consensus 431 ~-~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 505 (712)
+ .+....+.. .-+|+..++.........+.++.+|..+. . |..+.+-....... ...-++.||+....+ ...
T Consensus 264 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~--~~~ 340 (741)
T 1yr2_A 264 PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDG--APL 340 (741)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTT--CTT
T ss_pred CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCC--CCC
Confidence 1 222223333 34565444443332223578999999887 6 88775433222222 223467788775432 224
Q ss_pred CceEEeeCCC--CeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE-
Q psy14726 506 NSCEVYDPEC--NQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV- 582 (712)
Q Consensus 506 ~~v~~yd~~~--~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~- 582 (712)
..++.+|..+ ..|+.+-+-... .-..+...++.+++....++ ...++.+|+....-..+. .|......+...
T Consensus 341 ~~l~~~d~~~~~~~~~~l~~~~~~-~l~~~~~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s 415 (741)
T 1yr2_A 341 KKIVRVDLSGSTPRFDTVVPESKD-NLESVGIAGNRLFASYIHDA---KSQVLAFDLDGKPAGAVS-LPGIGSASGLSGR 415 (741)
T ss_dssp CEEEEEECSSSSCEEEEEECCCSS-EEEEEEEEBTEEEEEEEETT---EEEEEEEETTSCEEEECB-CSSSCEEEEEECC
T ss_pred CEEEEEeCCCCccccEEEecCCCC-eEEEEEEECCEEEEEEEECC---EEEEEEEeCCCCceeecc-CCCCeEEEEeecC
Confidence 5789999887 579887532221 11233444788888765432 356888887655444443 221111111111
Q ss_pred ECC-EEEEEcccCCCceeeeEEEEECCCCeEEEccC
Q psy14726 583 IDD-MIFAIGGFNGVTTIYHVECYDEKTDEWYEATD 617 (712)
Q Consensus 583 ~~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 617 (712)
-++ .|++.. .+. ..-..++.||..+++.+.+..
T Consensus 416 ~d~~~l~~~~-ss~-~~P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 416 PGDRHAYLSF-SSF-TQPATVLALDPATAKTTPWEP 449 (741)
T ss_dssp BTCSCEEEEE-EET-TEEEEEEEEETTTTEEEECSC
T ss_pred CCCCEEEEEE-cCC-CCCCEEEEEECCCCcEEEEec
Confidence 133 344332 111 123478999999988777643
No 222
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=94.55 E-value=2.1 Score=39.95 Aligned_cols=144 Identities=10% Similarity=0.015 Sum_probs=82.3
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCCceEE--c----ccCCccccceeEEEE--CCEEEEEcccCCCCccCceE
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSL--I----APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCE 509 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~--~----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 509 (712)
+++..+|.+|+|=| ..+|+++.....+.. + +.+|. ... ++... ++++|+|-| +.+|
T Consensus 28 Ai~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~-~iD-Aa~~~~~~~~iyfFkG-------~~~w 91 (207)
T 1pex_A 28 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPN-RID-AAYEHPSHDLIFIFRG-------RKFW 91 (207)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCS-SCC-EEEEETTTTEEEEEET-------TEEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCC-Ccc-EEEEeccCCcEEEEcc-------CEEE
Confidence 45567999999966 467888765544321 1 23442 222 22333 589999987 4577
Q ss_pred EeeCCCCee---EEeCC--CCCC--CcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEc---------CCCC
Q psy14726 510 VYDPECNQW---TLIEP--MRHR--RSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV---------PDMY 572 (712)
Q Consensus 510 ~yd~~~~~W---~~~~~--~p~~--r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~---------~~~p 572 (712)
+|+..+-.- ..+.. +|.. .-.++.... ++++|++-| +..|+||..+++=..- +.+|
T Consensus 92 ~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip 164 (207)
T 1pex_A 92 ALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFPGIG 164 (207)
T ss_dssp EESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHSTTSC
T ss_pred EEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCCCCC
Confidence 776432211 22332 3321 122222222 489999987 5789999876532110 1122
Q ss_pred CCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 573 NPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 573 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
..-.++...++++|+|-|. ..|.||..+.+=.
T Consensus 165 --~~iDaAf~~~g~~YfFkg~-------~y~rf~~~~~~v~ 196 (207)
T 1pex_A 165 --DKVDAVYEKNGYIYFFNGP-------IQFEYSIWSNRIV 196 (207)
T ss_dssp --SCCSEEEEETTEEEEEETT-------EEEEEETTTTEEE
T ss_pred --CCccEEEEcCCcEEEEECC-------EEEEEeCCccEEe
Confidence 2223444569999999663 6799998876543
No 223
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=94.53 E-value=0.013 Score=47.72 Aligned_cols=88 Identities=7% Similarity=0.071 Sum_probs=62.2
Q ss_pred EEEEecCCcEEeceeeeecccC-HHHHHhhcCC-CCcCCccceEEcCCCCHHHHHHHhhhhcc-CceecChh-hHHHHHH
Q psy14726 95 ATIVLADNSHFPIHRNILCACS-DYFRALFTTS-LHDQEKFSLVEIPGVDASVMTSLIEYAYL-RKLHITED-NVASLLL 170 (712)
Q Consensus 95 v~l~v~~~~~~~~Hk~vL~~~S-~yF~~mf~~~-~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt-~~~~i~~~-~~~~ll~ 170 (712)
|+|.| +|+.|...+..|+..- ..+.+|+... ...... .++.| |=++..|+.||+|+-+ |++.++.+ .+..+++
T Consensus 3 v~LNV-GG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~-~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~ 79 (100)
T 1t1d_A 3 VVINV-SGLRFETQLKTLNQFPDTLLGNPQKRNRYYDPLR-NEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSE 79 (100)
T ss_dssp EEEEE-TTEEEEEEHHHHHTSTTSTTTCHHHHGGGEETTT-TEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHH
T ss_pred EEEEE-CCEEEEeeHHHHhcCCCccccchhccccccCCCc-eeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHH
Confidence 68889 9999999999996542 1333444321 111233 56776 5689999999999998 89877654 4688999
Q ss_pred HhhhcChHHHH-HHHH
Q psy14726 171 ATDFFCMSKAQ-DLCC 185 (712)
Q Consensus 171 ~A~~~~i~~L~-~~c~ 185 (712)
-|.+|+|+++. +.|.
T Consensus 80 Ea~fy~i~~~~~~~~~ 95 (100)
T 1t1d_A 80 EIKFYELGENAFERYR 95 (100)
T ss_dssp HHHHTTCCHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHH
Confidence 99999997644 4443
No 224
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.45 E-value=5.5 Score=41.52 Aligned_cols=198 Identities=13% Similarity=0.068 Sum_probs=109.0
Q ss_pred eEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE--ECCeEEEEcccCCCCCCceeEEeec
Q psy14726 390 HGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNY 466 (712)
Q Consensus 390 ~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~ 466 (712)
+++++. ++.||+.... ...+.++|+.+++-..+..... ..+ ++. -++.+|+...... ..++++|+
T Consensus 134 ~~la~d~~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~~--~~~-ia~~~~g~~l~~~d~~~~----~~I~~~d~ 201 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGFK--GGK-PAVTKDKQRVYSIGWEGT----HTVYVYMK 201 (409)
T ss_dssp EEEEECSTTEEEEEETT-----TTEEEEEETTTTEEEEEEETCC--BCB-CEECTTSSEEEEEBSSTT----CEEEEEEG
T ss_pred eEEEEeCCCCEEEEecC-----CCcEEEEECCCCEEEEeeccCC--CCc-eeEecCCCcEEEEecCCC----ceEEEEEc
Confidence 344443 6789988652 2579999999887665543321 122 222 2346777643211 27999998
Q ss_pred CCCc-eEEcccCC--ccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCC---CCCCCcc-e-EEEEE
Q psy14726 467 TENQ-WSLIAPMN--VERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEP---MRHRRSG-V-SCIAY 536 (712)
Q Consensus 467 ~~~~-W~~~~~~p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~r~~-~-~~~~~ 536 (712)
.+.. ...+...+ ....-+++++- ++.||+..+ ...+++||+.+.....+.. ....... . .++..
T Consensus 202 ~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~ 275 (409)
T 3hrp_A 202 ASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYY 275 (409)
T ss_dssp GGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEE
T ss_pred CCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEe
Confidence 7653 23332211 11222333333 689999432 2479999999887665521 1111122 1 44444
Q ss_pred --CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCC--CC--------C--ccceEEEEE-CCEEEEEcc-cCCCceee
Q psy14726 537 --HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM--YN--------P--RSNFAIEVI-DDMIFAIGG-FNGVTTIY 600 (712)
Q Consensus 537 --~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~--p~--------~--r~~~~~~~~-~~~i~v~GG-~~~~~~~~ 600 (712)
++.||+.... ...|++||+....-...+.. +. . ..-.+++.- ++.||+.-. .+ .
T Consensus 276 p~~g~lyv~d~~-----~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~-----~ 345 (409)
T 3hrp_A 276 FVDSNFYMSDQN-----LSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKG-----Y 345 (409)
T ss_dssp TTTTEEEEEETT-----TTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTT-----C
T ss_pred CCCCEEEEEeCC-----CCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCC-----C
Confidence 5899998643 36799999876522222221 00 0 111233333 577998853 22 3
Q ss_pred eEEEEECCCCeEEEc
Q psy14726 601 HVECYDEKTDEWYEA 615 (712)
Q Consensus 601 ~v~~yd~~~~~W~~~ 615 (712)
.|.++|+.++....+
T Consensus 346 ~I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 346 CLRKLDILDGYVSTV 360 (409)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred EEEEEECCCCEEEEE
Confidence 689999777776655
No 225
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.39 E-value=0.91 Score=49.71 Aligned_cols=189 Identities=9% Similarity=-0.051 Sum_probs=95.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeec--CCCce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNY--TENQW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~--~~~~W 471 (712)
++.+|+.+.. ...+..+|..+++-...-+. ...-|+++.. +| .+|+.+. + +.+..||+ .+.+
T Consensus 148 ~~~~~vs~~~-----d~~V~v~D~~t~~~~~~i~~--g~~~~~v~~spdg~~l~v~~~-d-----~~V~v~D~~~~t~~- 213 (543)
T 1nir_A 148 PNLFSVTLRD-----AGQIALVDGDSKKIVKVIDT--GYAVHISRMSASGRYLLVIGR-D-----ARIDMIDLWAKEPT- 213 (543)
T ss_dssp GGEEEEEEGG-----GTEEEEEETTTCCEEEEEEC--STTEEEEEECTTSCEEEEEET-T-----SEEEEEETTSSSCE-
T ss_pred CCEEEEEEcC-----CCeEEEEECCCceEEEEEec--CcccceEEECCCCCEEEEECC-C-----CeEEEEECcCCCCc-
Confidence 5677877653 24688899988875432221 1124555443 44 5666542 2 67999999 5544
Q ss_pred EEcccCCccccceeEEEE-----CCE-EEEEcccCCCCccCceEEeeCCCCeeEEeCCC-----------CCCCcceEEE
Q psy14726 472 SLIAPMNVERSDASATTL-----QGK-IYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-----------RHRRSGVSCI 534 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~-----~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-----------p~~r~~~~~~ 534 (712)
.+..++....-..++.- +|+ +|+.+ .. -+++.++|..+.+-...-+. |.+|....+.
T Consensus 214 -~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~-~~----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~ 287 (543)
T 1nir_A 214 -KVAEIKIGIEARSVESSKFKGYEDRYTIAGA-YW----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIA 287 (543)
T ss_dssp -EEEEEECCSEEEEEEECCSTTCTTTEEEEEE-EE----SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEE
T ss_pred -EEEEEecCCCcceEEeCCCcCCCCCEEEEEE-cc----CCeEEEEeccccccceeecccCcccCccccccCCceEEEEE
Confidence 33333333222233322 454 55543 22 25678889887653322111 1223222222
Q ss_pred EE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEECCCCe
Q psy14726 535 AY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 535 ~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
.. ++.+|+.+.. ...++.+|..+.+-..+...+..+.-+.++.- +++ +|+.+.. .+.+.++|+++++
T Consensus 288 s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~-----~~~v~v~D~~tg~ 357 (543)
T 1nir_A 288 SHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN-----SNKVAVIDSKDRR 357 (543)
T ss_dssp CSSSSEEEEEETT-----TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG-----GTEEEEEETTTTE
T ss_pred CCCCCEEEEEECC-----CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecC-----CCeEEEEECCCCe
Confidence 23 3456655432 36788999876431111111222333333333 455 5544322 2368889999987
Q ss_pred EEE
Q psy14726 612 WYE 614 (712)
Q Consensus 612 W~~ 614 (712)
-..
T Consensus 358 l~~ 360 (543)
T 1nir_A 358 LSA 360 (543)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 226
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.37 E-value=1.4 Score=44.09 Aligned_cols=187 Identities=9% Similarity=0.048 Sum_probs=95.5
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++..++.|+.++ .+..++........................++..++.|+.+ ..+..||.....-....
T Consensus 97 dg~~l~s~~~d~-----~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-----~~~~~~d~~~~~~~~~~ 166 (340)
T 4aow_A 97 DGQFALSGSWDG-----TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD-----KTIKLWNTLGVCKYTVQ 166 (340)
T ss_dssp TSSEEEEEETTS-----EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEEC
T ss_pred CCCEEEEEcccc-----cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC-----CeEEEEEeCCCceEEEE
Confidence 566777777543 57778887776654433333333333333455666666644 34666776554322221
Q ss_pred cCCccccceeEEEE----CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCC
Q psy14726 476 PMNVERSDASATTL----QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGM 549 (712)
Q Consensus 476 ~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 549 (712)
... .......+.+ .+.+++.||.+ ..+..||..+.+....-.-. .....++.+ ++.+++.|+.+
T Consensus 167 ~~~-~~~~v~~~~~~~~~~~~~~~s~~~d-----~~i~i~d~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~D-- 236 (340)
T 4aow_A 167 DES-HSEWVSCVRFSPNSSNPIIVSCGWD-----KLVKVWNLANCKLKTNHIGH--TGYLNTVTVSPDGSLCASGGKD-- 236 (340)
T ss_dssp SSS-CSSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTTEEEEEECCC--SSCEEEEEECTTSSEEEEEETT--
T ss_pred ecc-ccCcccceEEccCCCCcEEEEEcCC-----CEEEEEECCCCceeeEecCC--CCcEEEEEECCCCCEEEEEeCC--
Confidence 111 1111122222 23466666655 35788898877643332111 112222222 56777788764
Q ss_pred CccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 550 SRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 550 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
..+..||..+.+-... +.....-.+++...+..++.||.++ .+.+||..+..-
T Consensus 237 ---g~i~iwd~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~d~-----~i~iwd~~~~~~ 289 (340)
T 4aow_A 237 ---GQAMLWDLNEGKHLYT--LDGGDIINALCFSPNRYWLCAATGP-----SIKIWDLEGKII 289 (340)
T ss_dssp ---CEEEEEETTTTEEEEE--EECSSCEEEEEECSSSSEEEEEETT-----EEEEEETTTTEE
T ss_pred ---CeEEEEEeccCceeee--ecCCceEEeeecCCCCceeeccCCC-----EEEEEECCCCeE
Confidence 4678888876543222 1111222233333444556666543 578888877653
No 227
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=94.22 E-value=1 Score=47.58 Aligned_cols=173 Identities=14% Similarity=0.135 Sum_probs=98.8
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEe--CCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc---
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI--APMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--- 470 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~--~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--- 470 (712)
++.+|+|-| +..|+||..+++...- +.+| . --++...+|++|+|-| +..++||+.+++
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG-------~~y~rfd~~~~~v~~ 220 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQG-------NQFLRFNPVSGEVPP 220 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEET-------TEEEEECTTTCCCCT
T ss_pred CCeEEEEec-------ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEEC-------CEEEEEcCccCcccC
Confidence 678899987 4689999988876532 2233 2 2345556799999988 567888876543
Q ss_pred ---------eEEcccCC------------------ccccceeEEE--ECCEEEEEcccCCCCccCceEEeeCCCCeeE--
Q psy14726 471 ---------WSLIAPMN------------------VERSDASATT--LQGKIYITGGFNGHNCLNSCEVYDPECNQWT-- 519 (712)
Q Consensus 471 ---------W~~~~~~p------------------~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-- 519 (712)
|..++... .+....-++. .+|++|++-| +..|++|...+.+.
T Consensus 221 gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg-------~~yWR~~~~~~~~~p~ 293 (460)
T 1qhu_A 221 GYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSW 293 (460)
T ss_dssp TCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET-------TEEEECTTGGGCCCCE
T ss_pred CCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC-------CEEEEEecCCCCcCcc
Confidence 21111100 0111223333 3689999887 34666665543321
Q ss_pred Ee----CCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCC----------CCCC--ccceEEEE-
Q psy14726 520 LI----EPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPD----------MYNP--RSNFAIEV- 582 (712)
Q Consensus 520 ~~----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~----------~p~~--r~~~~~~~- 582 (712)
.+ +.+|.. --++...++++|++=| +.+|+|+..+. .+.++. +|.. ...--+|.
T Consensus 294 ~Is~~WpglP~~--IDAAf~~~~~~yfFkG-------~~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~ 363 (460)
T 1qhu_A 294 PIAHQWPQGPST--VDAAFSWEDKLYLIQD-------TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFV 363 (460)
T ss_dssp EGGGTCTTSCSS--CSEEEEETTEEEEEET-------TEEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEEC
T ss_pred chhhhccCCCCC--CcEEEEECCeEEEEeC-------CEEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEEEE
Confidence 11 133332 3344456899999977 56888886531 222221 2221 11122333
Q ss_pred --ECCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 583 --IDDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 583 --~~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
-++++|+|-| +..|.||...
T Consensus 364 ~~~~~ktyfFkG-------~~ywryd~~~ 385 (460)
T 1qhu_A 364 CPGSSRLHIMAG-------RRLWWLDLKS 385 (460)
T ss_dssp CTTCCEEEEEET-------TEEEEEEGGG
T ss_pred eCCCCEEEEEEC-------CEEEEEECCC
Confidence 2689999977 3678998764
No 228
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.21 E-value=0.94 Score=47.05 Aligned_cols=144 Identities=10% Similarity=0.153 Sum_probs=77.2
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 520 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 520 (712)
+++.++.|+.+ ..+.+||..+.+-...-. .......++.+ ++..++.|+.+ ..+..||..+++...
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~--~h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQ--GHEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSL 201 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEEC--CCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEc--cCCCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCeeEE
Confidence 57777887754 468899988775432211 11111122222 56666677655 468889998877543
Q ss_pred eCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEc-CCCC----CCccceEEEEE--CCEEEEEc
Q psy14726 521 IEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-PDMY----NPRSNFAIEVI--DDMIFAIG 591 (712)
Q Consensus 521 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p----~~r~~~~~~~~--~~~i~v~G 591 (712)
.-.... ...+++.. ++.+++.|+.+ ..+..||..+..-... .... ........+.+ ++..++.|
T Consensus 202 ~~~~~~--~v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~ 274 (393)
T 1erj_A 202 TLSIED--GVTTVAVSPGDGKYIAAGSLD-----RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 274 (393)
T ss_dssp EEECSS--CEEEEEECSTTCCEEEEEETT-----SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEcCC--CcEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE
Confidence 322211 11222222 56778888764 4678899887654322 1110 11111222233 67777888
Q ss_pred ccCCCceeeeEEEEECCCC
Q psy14726 592 GFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 592 G~~~~~~~~~v~~yd~~~~ 610 (712)
+.++ .+.+||..+.
T Consensus 275 s~d~-----~v~~wd~~~~ 288 (393)
T 1erj_A 275 SLDR-----SVKLWNLQNA 288 (393)
T ss_dssp ETTS-----EEEEEEC---
T ss_pred eCCC-----EEEEEECCCC
Confidence 8765 5777777653
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.16 E-value=1.9 Score=48.53 Aligned_cols=118 Identities=11% Similarity=0.169 Sum_probs=74.1
Q ss_pred EEEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEcccCCcc--------ccceeEEEECCEEEEEcccCCCCccCce
Q psy14726 439 TAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNVE--------RSDASATTLQGKIYITGGFNGHNCLNSC 508 (712)
Q Consensus 439 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~v 508 (712)
-++.++.||+.... ..++.+|..+.+ |+.-...+.. ....+.++.+++||+... -..+
T Consensus 73 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg~l 140 (677)
T 1kb0_A 73 PVVVDGIMYVSASW------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DGRL 140 (677)
T ss_dssp CEEETTEEEEECGG------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEECCC------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CCEE
Confidence 35679999998652 568999988764 8765443211 122345567899998643 2469
Q ss_pred EEeeCCCCe--eEEeCC-CCC--CCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCc--EEEc
Q psy14726 509 EVYDPECNQ--WTLIEP-MRH--RRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT--WSQV 568 (712)
Q Consensus 509 ~~yd~~~~~--W~~~~~-~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 568 (712)
.++|..|++ |+.-.. -+. .....+.++.++.+|+..+.........+..||..+.+ |+.-
T Consensus 141 ~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 141 IALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 999998776 877543 111 11222334568888876543222234679999998764 8764
No 230
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.15 E-value=1.9 Score=44.19 Aligned_cols=243 Identities=6% Similarity=-0.147 Sum_probs=119.5
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEE-
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA- 440 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~- 440 (712)
..++.+|..+++...+.... .... .+.+.. +++.++++..+ ..++.+|+.+++-..+...+.........
T Consensus 60 ~~l~~~d~~~g~~~~lt~~~--~~~~-~~~~~spdg~~l~~~~~~-----~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~ 131 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEGR--GDNT-FGGFLSPDDDALFYVKDG-----RNLMRVDLATLEENVVYQVPAEWVGYGTWV 131 (388)
T ss_dssp CEEEEEETTTCEEEECCCSS--CBCS-SSCEECTTSSEEEEEETT-----TEEEEEETTTCCEEEEEECCTTEEEEEEEE
T ss_pred ceEEEEeCCCCceEEeeeCC--CCCc-cceEEcCCCCEEEEEeCC-----CeEEEEECCCCcceeeeechhhccccccee
Confidence 46889999998887753221 1111 111222 45444444421 47899999998877665555443322222
Q ss_pred -EECCeEEEEcccC-----------------CCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CCEEEEEcccCC
Q psy14726 441 -VHHDVIYAMGGYN-----------------GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QGKIYITGGFNG 501 (712)
Q Consensus 441 -~~~~~iyv~GG~~-----------------~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~ 501 (712)
..+++.++.--.. .......++.+|+.+.+-..+..-+ ....+....- +++.+++.....
T Consensus 132 ~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~sp~dg~~l~~~~~~~ 210 (388)
T 3pe7_A 132 ANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN-QWLGHPIYRPYDDSTVAFCHEGP 210 (388)
T ss_dssp ECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES-SCEEEEEEETTEEEEEEEEECSC
T ss_pred ECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC-ccccccEECCCCCCEEEEEEecC
Confidence 2344444321000 0112367999999988766554322 1222223333 455444333221
Q ss_pred -CCccCceEEeeCCCCeeEEeCCCCCCC-cceEEEEECCE-EEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCC----
Q psy14726 502 -HNCLNSCEVYDPECNQWTLIEPMRHRR-SGVSCIAYHEC-IYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNP---- 574 (712)
Q Consensus 502 -~~~~~~v~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~---- 574 (712)
......++.+|..+.....+....... ..+....-+++ |+...... ......++.+|+.+.+-+.+...+..
T Consensus 211 ~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~-~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~ 289 (388)
T 3pe7_A 211 HDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLK-GSPDRFIYSADPETLENRQLTSMPACSHLM 289 (388)
T ss_dssp TTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEET-TCCCEEEEEECTTTCCEEEEEEECCEEEEE
T ss_pred CCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCC-CCCcceEEEEecCCCceEEEEcCCCceeee
Confidence 123468999999887776665432211 11112222554 54433221 11123599999999887666443320
Q ss_pred --ccceEEEEECCEEEEEc----ccCCCceeeeEEEEECCCCeEEEcc
Q psy14726 575 --RSNFAIEVIDDMIFAIG----GFNGVTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 575 --r~~~~~~~~~~~i~v~G----G~~~~~~~~~v~~yd~~~~~W~~~~ 616 (712)
..+.....-+..|++.. |+.. .....++++|+.+++-..+.
T Consensus 290 ~~~~~~~~spdg~~l~~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~l~ 336 (388)
T 3pe7_A 290 SNYDGSLMVGDGSDAPVDVQDDSGYKI-ENDPFLYVFNMKNGTQHRVA 336 (388)
T ss_dssp ECTTSSEEEEEECCC-------------CCCCEEEEEETTTTEEEEEE
T ss_pred ecCCCCeEccCCCcceeEeeecccccc-CCCCEEEEEeccCCceEEec
Confidence 00011111123333321 1111 11247999999998876664
No 231
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=94.11 E-value=6.4 Score=44.34 Aligned_cols=240 Identities=9% Similarity=0.015 Sum_probs=122.6
Q ss_pred CceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCC--------CccceEEEEECCCCcE--EEeCCCC
Q psy14726 362 TDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGN--------EYYNSCRCFNAVTKVW--KEIAPMN 431 (712)
Q Consensus 362 ~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~--------~~~~~v~~yd~~~~~W--~~~~~~~ 431 (712)
...++.+|..+++..... .+..+. .+.+..|++-++++..... .....+++++..+..= ..+...+
T Consensus 154 ~~~i~v~dl~tg~~~~~~---~~~~k~-~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~ 229 (693)
T 3iuj_A 154 WREIHLMDVESKQPLETP---LKDVKF-SGISWLGNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAI 229 (693)
T ss_dssp EEEEEEEETTTCSEEEEE---EEEEES-CCCEEETTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCS
T ss_pred eEEEEEEECCCCCCCccc---cCCcee-ccEEEeCCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecC
Confidence 356888999888876531 111111 1112225443334433321 2345688888876542 1222222
Q ss_pred C--CcceeEE-EEECCeEEEEcccCCCCCCceeEEeecCCC--ceEEcccCCccccceeEEEECCEEEEEcccCCCCccC
Q psy14726 432 F--KRCYVST-AVHHDVIYAMGGYNGQRRQNSVEKYNYTEN--QWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLN 506 (712)
Q Consensus 432 ~--~r~~~~~-~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 506 (712)
. +....+. ..-+|+..++....+ ...+.++.+|..+. .|..+.+-...... ....-++++|+....++ ...
T Consensus 230 ~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l~~~t~~~~--~~~ 305 (693)
T 3iuj_A 230 PAQHHRYVGATVTEDDRFLLISAANS-TSGNRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTLYLLTNRDA--PNR 305 (693)
T ss_dssp GGGCCSEEEEEECTTSCEEEEEEESS-SSCCEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEEEEEECTTC--TTC
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEccC-CCCcEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEEEEEECCCC--CCC
Confidence 1 2222233 234555443332211 12368999998766 68777543222221 23345789999876543 245
Q ss_pred ceEEeeCCCC---eeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE-
Q psy14726 507 SCEVYDPECN---QWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV- 582 (712)
Q Consensus 507 ~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~- 582 (712)
.+..+|..+. .|+.+.+-..... +....++.|++..-.++ ...++.+|........+. +|......+...
T Consensus 306 ~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g---~~~l~~~d~~g~~~~~l~-~p~~~~~~~~~~~ 379 (693)
T 3iuj_A 306 RLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDA---TARVEQFDYEGKRVREVA-LPGLGSVSGFNGK 379 (693)
T ss_dssp EEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETT---EEEEEEECTTSCEEEEEC-CSSSSEEEECCCC
T ss_pred EEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECC---eeEEEEEECCCCeeEEee-cCCCceEEeeecC
Confidence 7888888764 4887654332222 44555677766543221 357889998866555553 222211111111
Q ss_pred EC-CEEEEEcccCCCceeeeEEEEECCCCeEEEccC
Q psy14726 583 ID-DMIFAIGGFNGVTTIYHVECYDEKTDEWYEATD 617 (712)
Q Consensus 583 ~~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 617 (712)
-+ +.+++.. .+. ..-..++.||+.+++++.+..
T Consensus 380 ~d~~~l~~~~-ss~-~tP~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 380 HDDPALYFGF-ENY-AQPPTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp TTCSCEEEEE-ECS-SSCCEEEEECTTTCCEEEEEC
T ss_pred CCCCEEEEEe-cCC-CCCCEEEEEECCCCeEEEEEe
Confidence 12 3344332 111 122468999999888877643
No 232
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.10 E-value=5.1 Score=39.71 Aligned_cols=203 Identities=4% Similarity=-0.033 Sum_probs=107.5
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..|..+|+....-.... . +..-+++++. ++.+|+...... ...++.+|+.+++...+...+..+.....+.
T Consensus 53 ~~I~~~d~~g~~~~~~~---~--~~~p~gia~~~dG~l~vad~~~~---~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~ 124 (306)
T 2p4o_A 53 GEIVSITPDGNQQIHAT---V--EGKVSGLAFTSNGDLVATGWNAD---SIPVVSLVKSDGTVETLLTLPDAIFLNGITP 124 (306)
T ss_dssp TEEEEECTTCCEEEEEE---C--SSEEEEEEECTTSCEEEEEECTT---SCEEEEEECTTSCEEEEEECTTCSCEEEEEE
T ss_pred CeEEEECCCCceEEEEe---C--CCCceeEEEcCCCcEEEEeccCC---cceEEEEcCCCCeEEEEEeCCCccccCcccc
Confidence 45788888764322211 1 1233455554 677888764211 1258899999998877766655555555554
Q ss_pred E-CCeEEEEcccCCCCCCceeEEeecCCCc---eEEccc----CCcc--ccceeEEEECCEEEEEcccCCCCccCceEEe
Q psy14726 442 H-HDVIYAMGGYNGQRRQNSVEKYNYTENQ---WSLIAP----MNVE--RSDASATTLQGKIYITGGFNGHNCLNSCEVY 511 (712)
Q Consensus 442 ~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~----~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 511 (712)
. ++.+|+.-. ....++++|+.+.+ |..-+. .+.. ....+...-++.+|+.-- ..+.+++|
T Consensus 125 ~~~~~~~v~d~-----~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~-----~~~~I~~~ 194 (306)
T 2p4o_A 125 LSDTQYLTADS-----YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT-----EKMLLLRI 194 (306)
T ss_dssp SSSSEEEEEET-----TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET-----TTTEEEEE
T ss_pred cCCCcEEEEEC-----CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeC-----CCCEEEEE
Confidence 3 456777532 12579999987642 311111 1111 111223223567998753 23578999
Q ss_pred eCCC-Ce---eEEeCCCCCCCcceEEEE-ECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEEC--
Q psy14726 512 DPEC-NQ---WTLIEPMRHRRSGVSCIA-YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVID-- 584 (712)
Q Consensus 512 d~~~-~~---W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~-- 584 (712)
|... .+ .+.......|+ ++++ -+|.||+.-.. .+.|.+||+. .+...+...+.+-.....+.++
T Consensus 195 ~~~~~g~~~~~~~~~~~~~P~---gi~vd~dG~l~va~~~-----~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~ 265 (306)
T 2p4o_A 195 PVDSTDKPGEPEIFVEQTNID---DFAFDVEGNLYGATHI-----YNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQT 265 (306)
T ss_dssp EBCTTSCBCCCEEEEESCCCS---SEEEBTTCCEEEECBT-----TCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCS
T ss_pred EeCCCCCCCccEEEeccCCCC---CeEECCCCCEEEEeCC-----CCeEEEECCC-CCEEEEeecccccCCceEEEEecc
Confidence 8764 22 12222222221 2222 26789888542 3578999986 5544432222232233444443
Q ss_pred ----CEEEEEcc
Q psy14726 585 ----DMIFAIGG 592 (712)
Q Consensus 585 ----~~i~v~GG 592 (712)
+.|||...
T Consensus 266 ~~d~~~LyVt~~ 277 (306)
T 2p4o_A 266 EGDCTAIYVVTN 277 (306)
T ss_dssp TTTTTEEEEEEC
T ss_pred cCCCCEEEEECC
Confidence 57888744
No 233
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.08 E-value=0.57 Score=48.34 Aligned_cols=148 Identities=6% Similarity=0.102 Sum_probs=75.9
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 520 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 520 (712)
++.+++.|+.+ ..+..||..+.+-...-..+........... ++.+++.|+.++ .+..||..+.+-..
T Consensus 111 ~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~d~~~~~~~~ 180 (408)
T 4a11_B 111 DTGMFTSSSFD-----KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP-----KVQLCDLKSGSCSH 180 (408)
T ss_dssp CTTCEEEEETT-----SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS-----SEEEEESSSSCCCE
T ss_pred CCcEEEEEeCC-----CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCC-----eEEEEeCCCcceee
Confidence 45577777643 4688999888765444332222111111111 344777776553 58888887664321
Q ss_pred eCCCCCCCcceEEEEE--CCE-EEEEcCCCCCCccceEEEEeCCCCc--EEEcCC------------CCCCccceEEEEE
Q psy14726 521 IEPMRHRRSGVSCIAY--HEC-IYVIGGFNGMSRMCNGEKYNPVTKT--WSQVPD------------MYNPRSNFAIEVI 583 (712)
Q Consensus 521 ~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~------------~p~~r~~~~~~~~ 583 (712)
. +........++.+ ++. +++.|+.+ ..+..||..+.. ...+.. ..........+.+
T Consensus 181 ~--~~~~~~~v~~~~~~~~~~~ll~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 181 I--LQGHRQEILAVSWSPRYDYILATASAD-----SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp E--ECCCCSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred e--ecCCCCcEEEEEECCCCCcEEEEEcCC-----CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 1 1111122222222 333 77777754 457888886542 222110 0111112222233
Q ss_pred --CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 584 --DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 584 --~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
++..++.|+.++ .+.+||..+++-
T Consensus 254 ~~~~~~l~~~~~dg-----~i~vwd~~~~~~ 279 (408)
T 4a11_B 254 TSDGLHLLTVGTDN-----RMRLWNSSNGEN 279 (408)
T ss_dssp CTTSSEEEEEETTS-----CEEEEETTTCCB
T ss_pred cCCCCEEEEecCCC-----eEEEEECCCCcc
Confidence 667777887665 578899887653
No 234
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.06 E-value=2.8 Score=50.87 Aligned_cols=216 Identities=6% Similarity=-0.018 Sum_probs=108.5
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH 442 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 442 (712)
.+..||..+++-... .... ...-.++++. ++..++.||.+ ..+..+|..+++....-..... .-.+++..
T Consensus 638 ~i~vw~~~~~~~~~~--~~~h-~~~v~~~~~s~~~~~l~s~~~d-----~~v~vwd~~~~~~~~~~~~~~~-~v~~~~~~ 708 (1249)
T 3sfz_A 638 TLQVFKAETGEKLLD--IKAH-EDEVLCCAFSSDDSYIATCSAD-----KKVKIWDSATGKLVHTYDEHSE-QVNCCHFT 708 (1249)
T ss_dssp CEEEEETTTCCEEEE--ECCC-SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECCSS-CEEEEEEC
T ss_pred eEEEEECCCCCEEEE--eccC-CCCEEEEEEecCCCEEEEEeCC-----CeEEEEECCCCceEEEEcCCCC-cEEEEEEe
Confidence 578889887765431 1111 1111223333 66677777743 3589999988775432111111 11222222
Q ss_pred ---CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCe
Q psy14726 443 ---HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ 517 (712)
Q Consensus 443 ---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 517 (712)
++.+++.|+.+ ..+..||..+.+....-. .......++.+ ++..++.|+.++ .+..||..+..
T Consensus 709 ~~~~~~~l~sg~~d-----~~v~vwd~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l~s~s~dg-----~v~vwd~~~~~ 776 (1249)
T 3sfz_A 709 NKSNHLLLATGSND-----FFLKLWDLNQKECRNTMF--GHTNSVNHCRFSPDDELLASCSADG-----TLRLWDVRSAN 776 (1249)
T ss_dssp SSSSCCEEEEEETT-----SCEEEEETTSSSEEEEEC--CCSSCEEEEEECSSTTEEEEEESSS-----EEEEEEGGGTE
T ss_pred cCCCceEEEEEeCC-----CeEEEEECCCcchhheec--CCCCCEEEEEEecCCCEEEEEECCC-----eEEEEeCCCCc
Confidence 33466666643 458889988776432211 11111222222 666777777653 57778877665
Q ss_pred eEEeCCCCC------------C-CcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE-E
Q psy14726 518 WTLIEPMRH------------R-RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV-I 583 (712)
Q Consensus 518 W~~~~~~p~------------~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~ 583 (712)
-...-..+. . .....+..-++..+++++ ...+..||..+..............-.+++. -
T Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp 850 (1249)
T 3sfz_A 777 ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA------KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP 850 (1249)
T ss_dssp EEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE------TTEEEEEETTTCCEEEEEECSSSSCCCEEEECS
T ss_pred ccceecccccccccCCccccccceEEEEEECCCCCEEEEEc------CCcEEEEEecCCCceeEEcCCCCCceEEEEEcC
Confidence 322211100 0 001111112455555554 2578899988776544321111111122222 2
Q ss_pred CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 584 DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 584 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
++.++++|+.++ .+.+||..+..
T Consensus 851 ~~~~l~~~~~dg-----~v~vwd~~~~~ 873 (1249)
T 3sfz_A 851 YDHLAVIALSQY-----CVELWNIDSRL 873 (1249)
T ss_dssp STTEEEEECSSS-----CEEEEETTTTE
T ss_pred CCCEEEEEeCCC-----eEEEEEcCCCc
Confidence 677777777655 57788887754
No 235
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=94.06 E-value=1.9 Score=47.43 Aligned_cols=191 Identities=9% Similarity=-0.037 Sum_probs=103.4
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++.++++.+..+ .+..||..+++...+...+. ......-+|+..++++.... ....++++|+.+.++..+.
T Consensus 121 g~~~~~~s~~~~-----~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~-~~~~i~~~d~~~g~~~~l~ 191 (582)
T 3o4h_A 121 GEAVVFTGATED-----RVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGG-GRVSLFTSNLSSGGLRVFD 191 (582)
T ss_dssp SSCEEEEEECSS-----CEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEET-TEEEEEEEETTTCCCEEEC
T ss_pred CCeEEEEecCCC-----CceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCC-CCeEEEEEcCCCCCceEee
Confidence 445555555322 23477988888777654333 22334457776666554322 1245999999999988774
Q ss_pred cCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceE-------EEEECCEEEEEcCC
Q psy14726 476 PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVS-------CIAYHECIYVIGGF 546 (712)
Q Consensus 476 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~-------~~~~~~~iyv~GG~ 546 (712)
.-+.. ...... +|+.++.+..++ ...++.+|.++++...+........... ...-++++|+.+..
T Consensus 192 ~~~~~---~~~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 192 SGEGS---FSSASISPGMKVTAGLETAR---EARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARR 265 (582)
T ss_dssp CSSCE---EEEEEECTTSCEEEEEECSS---CEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEE
T ss_pred cCCCc---cccceECCCCCEEEEccCCC---eeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEc
Confidence 33211 122222 666554443332 2579999999988873322111111111 02336677777654
Q ss_pred CCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 547 NGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 547 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
+ ..+..|+. ++... .+... ..+++..++++++.++.... ...++.+|..+ +...+
T Consensus 266 ~-----g~~~l~~~--g~~~~---~~~~~-v~~~~~sdg~~l~~~s~~~~--p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 266 E-----GRSAVFID--GERVE---APQGN-HGRVVLWRGKLVTSHTSLST--PPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp T-----TEEEEEET--TEEEC---CCSSE-EEEEEEETTEEEEEEEETTE--EEEEEEETTCC-EEECC
T ss_pred C-----CcEEEEEE--CCeec---cCCCc-eEEEEecCCEEEEEEcCCCC--CCeEEEEcCCC-ceEEE
Confidence 3 35667776 44433 22221 12233238888877665432 34688888775 55444
No 236
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=94.05 E-value=3.9 Score=40.15 Aligned_cols=222 Identities=9% Similarity=0.081 Sum_probs=104.3
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
+.|..+|..+++....-..... ...-.+++.. ++..++.|+.+ ..+..+|..+++-........ .......
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~-~~~V~~v~~~~~~~~l~sgs~D-----g~v~iw~~~~~~~~~~~~~h~--~~~~~~~ 116 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRNMTSHS--ARVGSLS 116 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCST-TCCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCS--SCEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCC-CCeEEEEEECCCCCEEEEEECC-----CcEEEeecCCceeEEEecCcc--ceEEEee
Confidence 4688999998876653111111 1112233333 66777888854 368889998887543322222 2223344
Q ss_pred ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEE--ECCEEEEEcccCCCCccCceEEeeCCCCeeE
Q psy14726 442 HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATT--LQGKIYITGGFNGHNCLNSCEVYDPECNQWT 519 (712)
Q Consensus 442 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 519 (712)
.++.+.+.|+.. ..+..++..+....... +........... .+++.++.|+.++ .+..||..+.+-.
T Consensus 117 ~~~~~l~s~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~ 185 (318)
T 4ggc_A 117 WNSYILSSGSRS-----GHIHHHDVRVAEHHVAT-LSGHSQEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPGEGG 185 (318)
T ss_dssp EETTEEEEEETT-----SEEEEEETTSSSCEEEE-EECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESSCBTTB
T ss_pred cCCCEEEEEecC-----CceEeeecCCCceeEEE-EcCccCceEEEEEcCCCCEEEEEecCc-----ceeEEECCCCccc
Confidence 556666666643 23444554443322111 111111111112 2566667776653 4777887664311
Q ss_pred --EeCCCCCCCcc-eEEEEE--C-CEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEccc
Q psy14726 520 --LIEPMRHRRSG-VSCIAY--H-ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGF 593 (712)
Q Consensus 520 --~~~~~p~~r~~-~~~~~~--~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 593 (712)
........... .+.+.. + ..+++.+|.. ...+..+|..+..-.........-........++.+++.+|.
T Consensus 186 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~----~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~ 261 (318)
T 4ggc_A 186 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS----DRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF 261 (318)
T ss_dssp SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT----TCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECT
T ss_pred ccceeeecccCCceEEEEecCCCCcEEEEEecCC----CCEEEEEecccccccccccceeeeeeeeecccccceEEEEEc
Confidence 11111111111 112222 2 2344444432 346778888776554443222221111111225566666554
Q ss_pred CCCceeeeEEEEECCCCe
Q psy14726 594 NGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 594 ~~~~~~~~v~~yd~~~~~ 611 (712)
.. ..+.+||..+.+
T Consensus 262 ~d----~~i~iwd~~~~~ 275 (318)
T 4ggc_A 262 AQ----NQLVIWKYPTMA 275 (318)
T ss_dssp TT----CCEEEEETTTCC
T ss_pred CC----CEEEEEECCCCc
Confidence 32 257888987654
No 237
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.04 E-value=1.8 Score=44.54 Aligned_cols=184 Identities=11% Similarity=0.165 Sum_probs=95.6
Q ss_pred EEEEEeecCCCCccceEEEEECCCCcEEEeC--CCCCCcc--eeEEEE--ECCeEEEEcccCCCCCCceeEEeecCCCc-
Q psy14726 398 NIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA--PMNFKRC--YVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNYTENQ- 470 (712)
Q Consensus 398 ~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~~~~r~--~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~- 470 (712)
..++.|+.+ ..+..||..+++-...- ..+.... -.+++. .++.+++.||.+ ..+..||+....
T Consensus 171 ~~l~s~s~D-----~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D-----~~v~~wd~~~~~~ 240 (380)
T 3iz6_a 171 TRLITGSGD-----QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD-----TTVRLWDLRITSR 240 (380)
T ss_dssp SCEEEECTT-----SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-----SCEEEEETTTTCC
T ss_pred CEEEEECCC-----CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC-----CeEEEEECCCCCc
Confidence 345555533 35888999887754332 1111111 122222 266888888865 458888876321
Q ss_pred -eEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCC-------CCcceEEEEECCEE
Q psy14726 471 -WSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRH-------RRSGVSCIAYHECI 540 (712)
Q Consensus 471 -W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-------~r~~~~~~~~~~~i 540 (712)
-..+.. -...-.++.+ ++..++.|+.++ .+..||..++.-...-.... +.....+...++.+
T Consensus 241 ~~~~~~~---h~~~v~~v~~~p~~~~l~s~s~D~-----~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 312 (380)
T 3iz6_a 241 AVRTYHG---HEGDINSVKFFPDGQRFGTGSDDG-----TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRL 312 (380)
T ss_dssp CCEEECC---CSSCCCEEEECTTSSEEEEECSSS-----CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSE
T ss_pred ceEEECC---cCCCeEEEEEecCCCeEEEEcCCC-----eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCE
Confidence 111111 0111122233 677888888664 58888988876433211111 11112222336777
Q ss_pred EEEcCCCCCCccceEEEEeCCCCcEEE-cCCCCCC---ccceEEEEECCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 541 YVIGGFNGMSRMCNGEKYNPVTKTWSQ-VPDMYNP---RSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 541 yv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~p~~---r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
++.|+.+ ..+..||..+.+-.. +..+... +...-+..-++..++.||.++ .+.+||...
T Consensus 313 l~~g~~d-----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~-----~i~iW~~~~ 375 (380)
T 3iz6_a 313 LFAGYSN-----GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK-----NLKIWAFSG 375 (380)
T ss_dssp EEEECTT-----SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS-----CEEEEECCS
T ss_pred EEEEECC-----CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC-----CEEEEecCC
Confidence 7777654 468899987765432 2222111 111112222778888898876 456666654
No 238
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.01 E-value=0.68 Score=46.74 Aligned_cols=186 Identities=12% Similarity=0.135 Sum_probs=94.5
Q ss_pred EEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEEC----CeEEEEcccCCCCCCceeEEeecCCCc--e
Q psy14726 398 NIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHH----DVIYAMGGYNGQRRQNSVEKYNYTENQ--W 471 (712)
Q Consensus 398 ~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~----~~iyv~GG~~~~~~~~~v~~yd~~~~~--W 471 (712)
.+++.|+... ....+..||..+++............-.+++... +.+++.|+.+ ..+..||..+.+ -
T Consensus 32 ~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~ 104 (357)
T 3i2n_A 32 KFVTMGNFAR--GTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG-----GNLHIWNLEAPEMPV 104 (357)
T ss_dssp EEEEEEC--C--CCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT-----SCEEEECTTSCSSCS
T ss_pred eEEEecCccC--CCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC-----CeEEEEeCCCCCccE
Confidence 5666665311 1246888898888765443222222222333322 4777777654 458888887664 1
Q ss_pred EEcccCCccccceeEE-------EECCEEEEEcccCCCCccCceEEeeCCCCe--eEEeCCCCC--CCcceEEE-----E
Q psy14726 472 SLIAPMNVERSDASAT-------TLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIEPMRH--RRSGVSCI-----A 535 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~-------~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~--~r~~~~~~-----~ 535 (712)
..+...... -.++. .-++..++.|+.++ .+..||..+.. ...+..... .+.-.+++ .
T Consensus 105 ~~~~~~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 177 (357)
T 3i2n_A 105 YSVKGHKEI--INAIDGIGGLGIGEGAPEIVTGSRDG-----TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYN 177 (357)
T ss_dssp EEECCCSSC--EEEEEEESGGGCC-CCCEEEEEETTS-----CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC
T ss_pred EEEEecccc--eEEEeeccccccCCCccEEEEEeCCC-----eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccC
Confidence 122111110 01111 12566777777653 57888887764 344432221 11222222 1
Q ss_pred ECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE----CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 536 YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI----DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 536 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
-++.+++.|+.+ ..+..||..+.+-....... ..-.+++.. ++..+++|+.++ .+.+||..+
T Consensus 178 ~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~ 243 (357)
T 3i2n_A 178 QEERVVCAGYDN-----GDIKLFDLRNMALRWETNIK--NGVCSLEFDRKDISMNKLVATSLEG-----KFHVFDMRT 243 (357)
T ss_dssp -CCCEEEEEETT-----SEEEEEETTTTEEEEEEECS--SCEEEEEESCSSSSCCEEEEEESTT-----EEEEEEEEE
T ss_pred CCCCEEEEEccC-----CeEEEEECccCceeeecCCC--CceEEEEcCCCCCCCCEEEEECCCC-----eEEEEeCcC
Confidence 366777777653 57889999887643332221 122233333 567777777665 456666544
No 239
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=94.00 E-value=6 Score=44.57 Aligned_cols=209 Identities=11% Similarity=0.003 Sum_probs=112.2
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCC--------CCCceeEEeecC
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQ--------RRQNSVEKYNYT 467 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~--------~~~~~v~~yd~~ 467 (712)
+++.++++-..++.....++.+|..+++..... .+..+....... +|+-++++..... .....+++++..
T Consensus 139 Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lg 216 (693)
T 3iuj_A 139 DGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLG 216 (693)
T ss_dssp TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETT
T ss_pred CCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECC
Confidence 666666654433334467999999999876541 111111222334 6654444332221 345678888877
Q ss_pred CCce--EEcccCCc--cccceeEE-EECCEEEEEcccCCCCccCceEEeeCCCC--eeEEeCCCCCCCcceEEEEECCEE
Q psy14726 468 ENQW--SLIAPMNV--ERSDASAT-TLQGKIYITGGFNGHNCLNSCEVYDPECN--QWTLIEPMRHRRSGVSCIAYHECI 540 (712)
Q Consensus 468 ~~~W--~~~~~~p~--~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~i 540 (712)
+..= ..+-..+. +....++. .-+++..++....+ ...+.++.+|..+. .|..+..-...... .....+++|
T Consensus 217 t~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l 294 (693)
T 3iuj_A 217 TAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS-TSGNRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTL 294 (693)
T ss_dssp SCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS-SSCCEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEE
T ss_pred CCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC-CCCcEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEE
Confidence 7642 12222221 11112222 22555333332221 12368999998765 68777542222222 234457899
Q ss_pred EEEcCCCCCCccceEEEEeCCCC---cEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 541 YVIGGFNGMSRMCNGEKYNPVTK---TWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 541 yv~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
|+....+. ....++.+|+.+. .|+.+.+-.... . +....++.|++..-.++ ...++++|+.++....+
T Consensus 295 ~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~-~~s~~g~~lv~~~~~~g---~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 295 YLLTNRDA--PNRRLVTVDAANPGPAHWRDLIPERQQV-L-TVHSGSGYLFAEYMVDA---TARVEQFDYEGKRVREV 365 (693)
T ss_dssp EEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSSC-E-EEEEETTEEEEEEEETT---EEEEEEECTTSCEEEEE
T ss_pred EEEECCCC--CCCEEEEEeCCCCCccccEEEecCCCCE-E-EEEEECCEEEEEEEECC---eeEEEEEECCCCeeEEe
Confidence 99876432 2467899998763 488764322222 2 55555777776644433 34689999887665554
No 240
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=93.96 E-value=0.45 Score=57.96 Aligned_cols=186 Identities=9% Similarity=0.059 Sum_probs=95.7
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++..++.||.+ ..+..||..+++........ ..-.+++...+..++.|+.+ ..+..||..+.+-...-
T Consensus 1014 dg~~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~--~~v~~~~~~~~~~l~~~~~d-----g~v~vwd~~~~~~~~~~ 1081 (1249)
T 3sfz_A 1014 DGKTLISSSED-----SVIQVWNWQTGDYVFLQAHQ--ETVKDFRLLQDSRLLSWSFD-----GTVKVWNVITGRIERDF 1081 (1249)
T ss_dssp SSSCEEEECSS-----SBEEEEETTTTEEECCBCCS--SCEEEEEECSSSEEEEEESS-----SEEEEEETTTTCCCEEE
T ss_pred CCCEEEEEcCC-----CEEEEEECCCCceEEEecCC--CcEEEEEEcCCCcEEEEECC-----CcEEEEECCCCceeEEE
Confidence 56666777643 35889999998876543222 22233344444445555543 46888998876532221
Q ss_pred cCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccc
Q psy14726 476 PMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMC 553 (712)
Q Consensus 476 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 553 (712)
..........+..-+++.++.|+.++ .+..||..+.+ .+..+........++.+ ++++++.|+.+ .
T Consensus 1082 ~~~~~~v~~~~~s~d~~~l~s~s~d~-----~v~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~d-----g 1149 (1249)
T 3sfz_A 1082 TCHQGTVLSCAISSDATKFSSTSADK-----TAKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDN-----G 1149 (1249)
T ss_dssp ECCSSCCCCEEECSSSSSCEEECCSS-----CCCEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETT-----S
T ss_pred cccCCcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCC-----C
Confidence 11111122222223677777777654 46677766553 22222222222223333 67777888754 3
Q ss_pred eEEEEeCCCCcEEEcC-CC------CCCcc-ceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 554 NGEKYNPVTKTWSQVP-DM------YNPRS-NFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 554 ~v~~yd~~~~~W~~~~-~~------p~~r~-~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
.+..||..+.+..... +. ..... -.+++.. +++.++.|| ..+.+||..+++.
T Consensus 1150 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~-------g~v~vwd~~~g~~ 1210 (1249)
T 3sfz_A 1150 EIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG-------GYLKWWNVATGDS 1210 (1249)
T ss_dssp CCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES-------SSEEEBCSSSCBC
T ss_pred EEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC-------CeEEEEECCCCce
Confidence 4678888765432211 10 00111 1122222 566666655 2578899887654
No 241
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=93.94 E-value=3.2 Score=41.08 Aligned_cols=189 Identities=13% Similarity=0.169 Sum_probs=94.3
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCC--cEEEeCCCCCCcce-eEEEEE---CCeEEEEcccCCCCCCceeEEeecCCC
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTK--VWKEIAPMNFKRCY-VSTAVH---HDVIYAMGGYNGQRRQNSVEKYNYTEN 469 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~~~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~ 469 (712)
++.+++.|+.+ ..+..||..++ .+.....+...... .+++.. ++.+++.|+.+ ..+.+||..+.
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-----g~v~vwd~~~~ 91 (351)
T 3f3f_A 22 YGRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-----KTVKLWEEDPD 91 (351)
T ss_dssp SSSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEECTT
T ss_pred CCCEEEEeeCC-----CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-----CeEEEEecCCC
Confidence 45566666643 35677776643 44443333222222 233333 37778888754 35778887654
Q ss_pred -------ceEEcccCCccccceeEEEE--C--CEEEEEcccCCCCccCceEEeeCCCCe----eEEeC---CC--C--CC
Q psy14726 470 -------QWSLIAPMNVERSDASATTL--Q--GKIYITGGFNGHNCLNSCEVYDPECNQ----WTLIE---PM--R--HR 527 (712)
Q Consensus 470 -------~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~----W~~~~---~~--p--~~ 527 (712)
.|..+..+.........+.+ + +.+++.|+.++ .+..||..+.+ |.... .+ . ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 92 QEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG-----ILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp SCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC-----EEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred cccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCC-----cEEEecCCChHHhccccccccccccccccCCc
Confidence 34444433322222333333 3 66777777653 57888876553 32211 11 1 11
Q ss_pred CcceEEEEE-----CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceE-EEEE-CC----EEEEEcccCCC
Q psy14726 528 RSGVSCIAY-----HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFA-IEVI-DD----MIFAIGGFNGV 596 (712)
Q Consensus 528 r~~~~~~~~-----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~-~~~~-~~----~i~v~GG~~~~ 596 (712)
.....++.. ++..++.|+.+ ..+..++........+..+........ ++.. ++ .+++.|+.++
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg- 240 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALE-----QAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG- 240 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETT-----EEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS-
T ss_pred ccceeEEEeccCCCCCcEEEEecCC-----CcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC-
Confidence 111122222 25667777653 344555666666655444333222222 3333 33 7888888766
Q ss_pred ceeeeEEEEECCC
Q psy14726 597 TTIYHVECYDEKT 609 (712)
Q Consensus 597 ~~~~~v~~yd~~~ 609 (712)
.+.+||..+
T Consensus 241 ----~i~iwd~~~ 249 (351)
T 3f3f_A 241 ----RIRIFKITE 249 (351)
T ss_dssp ----CEEEEEEEE
T ss_pred ----eEEEEeCCC
Confidence 355565544
No 242
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=93.90 E-value=2.7 Score=47.46 Aligned_cols=118 Identities=14% Similarity=0.218 Sum_probs=73.3
Q ss_pred EEEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEcccCCcc--------ccceeEEEECCEEEEEcccCCCCccCce
Q psy14726 439 TAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNVE--------RSDASATTLQGKIYITGGFNGHNCLNSC 508 (712)
Q Consensus 439 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~v 508 (712)
-++.++.||+.+.. ..++.+|..|.+ |+.-...+.. ....+.++.+++||+... + ..+
T Consensus 66 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-d-----g~l 133 (689)
T 1yiq_A 66 PIVVDGVMYTTGPF------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-D-----GRL 133 (689)
T ss_dssp CEEETTEEEEECGG------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-T-----SEE
T ss_pred CEEECCEEEEEcCC------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc-C-----CEE
Confidence 35679999997652 468999988764 8765433211 112234567899988642 2 468
Q ss_pred EEeeCCCCe--eEEeCC-CCC--CCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCc--EEEc
Q psy14726 509 EVYDPECNQ--WTLIEP-MRH--RRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT--WSQV 568 (712)
Q Consensus 509 ~~yd~~~~~--W~~~~~-~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 568 (712)
..+|.+|++ |+.-.. -+. .....+.++.++.+|+..+.........+..||..+.+ |+.-
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 134 EAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 999998876 887643 111 11122335578988875432222234689999998875 8764
No 243
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=93.84 E-value=3.3 Score=38.18 Aligned_cols=142 Identities=12% Similarity=0.104 Sum_probs=81.7
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCCC--cEE--Ee----CCCCCCcceeEEEEE--CCeEEEEcccCCCCCCce
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTK--VWK--EI----APMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNS 460 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~--~W~--~~----~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 460 (712)
+++.+++.+|+|=| +.+|+++.... ... .+ +.+|.. -. ++... ++++|+|-| +.
T Consensus 11 Ai~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-ID-Aa~~~~~~~~~yfFkG-------~~ 74 (195)
T 1itv_A 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRK-LD-SVFEEPLSKKLFFFSG-------RQ 74 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS-CS-EEEECTTTCCEEEEET-------TE
T ss_pred EEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCCC-cc-EEEEECCCCeEEEEeC-------CE
Confidence 44556899999977 46788877552 222 11 234432 11 22222 689999987 56
Q ss_pred eEEeecCCCce-EEccc--CCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeE-----Ee----CCCCC
Q psy14726 461 VEKYNYTENQW-SLIAP--MNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT-----LI----EPMRH 526 (712)
Q Consensus 461 v~~yd~~~~~W-~~~~~--~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~----~~~p~ 526 (712)
+|+|+..+..- ..+.. +|......-||.. ++++|++-| +..++||..+++=. .+ +.+|
T Consensus 75 yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp- 146 (195)
T 1itv_A 75 VWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFPGVP- 146 (195)
T ss_dssp EEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHSTTSC-
T ss_pred EEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcCCCCC-
Confidence 88887542111 01111 2221112233333 689999977 46899998776421 11 1222
Q ss_pred CCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCc
Q psy14726 527 RRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT 564 (712)
Q Consensus 527 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 564 (712)
..-.++...++.+|.+-| +..++||..+.+
T Consensus 147 -~~idaa~~~~g~~Yffkg-------~~y~~~~~~~~~ 176 (195)
T 1itv_A 147 -LDTHDVFQFREKAYFCQD-------RFYWRVSSRSEL 176 (195)
T ss_dssp -SSCSEEEEETTEEEEEET-------TEEEEEECCTTC
T ss_pred -CCCCEEEEeCCeEEEEeC-------CEEEEEECCccE
Confidence 223455566899999987 568888887654
No 244
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=93.77 E-value=0.01 Score=51.68 Aligned_cols=81 Identities=14% Similarity=0.191 Sum_probs=60.9
Q ss_pred cEEEEecCCcEEeceeeeecccCHHHHHhhcCCC----CcCCccceEEcCCCCHHHHHHHhhhhccCceecChh-hHHHH
Q psy14726 94 DATIVLADNSHFPIHRNILCACSDYFRALFTTSL----HDQEKFSLVEIPGVDASVMTSLIEYAYLRKLHITED-NVASL 168 (712)
Q Consensus 94 Dv~l~v~~~~~~~~Hk~vL~~~S~yF~~mf~~~~----~e~~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~i~~~-~~~~l 168 (712)
=|+|.| +|+.|...+..|..... .||...- ..... .++.| |=++..|+.||+|+-+|++.+..+ .+..+
T Consensus 36 ~V~LNV-GG~~F~T~~~TL~~~P~---S~L~~~~~~~~~~~~~-g~yFi-DRdp~~F~~ILnflR~G~l~~p~~~~~~~l 109 (140)
T 2nz0_B 36 LIVLNV-SGRRFQTWRTTLERYPD---TLLGSTEKEFFFNEDT-KEYFF-DRDPEVFRCVLNFYRTGKLHYPRYECISAY 109 (140)
T ss_dssp EEEEEE-TTEEEEEEHHHHHTCTT---STTTSGGGGGSEETTT-TEEEE-CSCHHHHHHHHHHHHHSSBCCCTTSCHHHH
T ss_pred EEEEEE-CCEEEEeeHHHHhcCCC---eeecccCCcccccCCC-CeEEE-eCCcHHHHHHHHHHhcCCcCCCCCcCHHHH
Confidence 488889 99999999999976432 2343311 11223 56666 469999999999999999987654 47889
Q ss_pred HHHhhhcChHHH
Q psy14726 169 LLATDFFCMSKA 180 (712)
Q Consensus 169 l~~A~~~~i~~L 180 (712)
++-|++|+|+.+
T Consensus 110 ~eEa~fy~i~~l 121 (140)
T 2nz0_B 110 DDELAFYGILPE 121 (140)
T ss_dssp HHHHHHHTCCGG
T ss_pred HHHHHHcCCChH
Confidence 999999999886
No 245
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=93.63 E-value=6.3 Score=43.13 Aligned_cols=237 Identities=10% Similarity=-0.046 Sum_probs=121.8
Q ss_pred CceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECC--CC
Q psy14726 347 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAV--TK 422 (712)
Q Consensus 347 ~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~--~~ 422 (712)
.+.+++... ..+.+..+|..+++-... ++....-|++++. +..+|+.+ . ...+..||+. +.
T Consensus 166 ~~~~~V~~~-----~~~~V~viD~~t~~v~~~----i~~g~~p~~v~~SpDGr~lyv~~-~-----dg~V~viD~~~~t~ 230 (567)
T 1qks_A 166 ENLFSVTLR-----DAGQIALIDGSTYEIKTV----LDTGYAVHISRLSASGRYLFVIG-R-----DGKVNMIDLWMKEP 230 (567)
T ss_dssp GGEEEEEET-----TTTEEEEEETTTCCEEEE----EECSSCEEEEEECTTSCEEEEEE-T-----TSEEEEEETTSSSC
T ss_pred CceEEEEeC-----CCCeEEEEECCCCeEEEE----EeCCCCccceEECCCCCEEEEEc-C-----CCeEEEEECCCCCC
Confidence 345665543 235788999988865531 1122233555554 45677654 2 2469999995 44
Q ss_pred cEEEeCCCCCCcceeEEEEE-----CC-eEEEEcccCCCCCCceeEEeecCCCceEEc-c--cC--------Ccccccee
Q psy14726 423 VWKEIAPMNFKRCYVSTAVH-----HD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLI-A--PM--------NVERSDAS 485 (712)
Q Consensus 423 ~W~~~~~~~~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~--~~--------p~~r~~~~ 485 (712)
+- +..++....-..+++. +| .+|+..- ..+++.++|..+.+=... + .+ |.+|....
T Consensus 231 ~~--v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~-----~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i 303 (567)
T 1qks_A 231 TT--VAEIKIGSEARSIETSKMEGWEDKYAIAGAY-----WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAI 303 (567)
T ss_dssp CE--EEEEECCSEEEEEEECCSTTCTTTEEEEEEE-----ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEE
T ss_pred cE--eEEEecCCCCceeEEccccCCCCCEEEEEEc-----cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEE
Confidence 32 2233322223344444 55 5666532 235688889766543221 1 11 11222221
Q ss_pred EEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC-EEEEEcCCCCCCccceEEEEeCCCC
Q psy14726 486 ATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 486 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~ 563 (712)
.+..++..+++-- .....++..|..+.....+..++..+.-|..... ++ .+|+.... .+.|.++|..++
T Consensus 304 ~~s~~~~~~vv~~----~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~-----sn~V~ViD~~t~ 374 (567)
T 1qks_A 304 LASHYRPEFIVNV----KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA-----RNKLVVIDTKEG 374 (567)
T ss_dssp EECSSSSEEEEEE----TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG-----GTEEEEEETTTT
T ss_pred EEcCCCCEEEEEe----cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCC-----CCeEEEEECCCC
Confidence 1112222232221 1135678888877665555545555665555433 33 45554432 478999999987
Q ss_pred cEEE---c-CCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCC-----eEEEccCCC
Q psy14726 564 TWSQ---V-PDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTD-----EWYEATDMN 619 (712)
Q Consensus 564 ~W~~---~-~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~-----~W~~~~~~p 619 (712)
+-.. + +..|.+..+... .. ++.+|+.+-... ..|-++|..+. .|+.+..++
T Consensus 375 kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~----~~Vsvid~~~~~~~~~~~kvv~~i~ 436 (567)
T 1qks_A 375 KLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGD----DSVALIGTDPEGHPDNAWKILDSFP 436 (567)
T ss_dssp EEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSS----SEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred cEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCC----CeEEEecCCCCCCccccCEEEEEEe
Confidence 6332 2 334444333332 23 366777652211 25778887763 387765544
No 246
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=93.60 E-value=3 Score=41.64 Aligned_cols=176 Identities=9% Similarity=0.064 Sum_probs=88.5
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCc----EEEeCCCCCCcceeEEEE-ECCe-EEEEcccCCCCCCceeEEeec-CC
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKV----WKEIAPMNFKRCYVSTAV-HHDV-IYAMGGYNGQRRQNSVEKYNY-TE 468 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~----W~~~~~~~~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~v~~yd~-~~ 468 (712)
++.+++.|+.+ ..+..||..++. ...... ....-.+++. -++. .++.|+.+ ..+..||. .+
T Consensus 22 ~~~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~ 89 (342)
T 1yfq_A 22 SKSLLLITSWD-----GSLTVYKFDIQAKNVDLLQSLR--YKHPLLCCNFIDNTDLQIYVGTVQ-----GEILKVDLIGS 89 (342)
T ss_dssp GGTEEEEEETT-----SEEEEEEEETTTTEEEEEEEEE--CSSCEEEEEEEESSSEEEEEEETT-----SCEEEECSSSS
T ss_pred CCCEEEEEcCC-----CeEEEEEeCCCCccccceeeee--cCCceEEEEECCCCCcEEEEEcCC-----CeEEEEEeccC
Confidence 44556666643 357788877665 333221 1112223333 3677 77777754 46899999 88
Q ss_pred CceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCC---e----eEEeCCCCCCCcceEEEEECCEEE
Q psy14726 469 NQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECN---Q----WTLIEPMRHRRSGVSCIAYHECIY 541 (712)
Q Consensus 469 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~---~----W~~~~~~p~~r~~~~~~~~~~~iy 541 (712)
.+...+...+....-.+++...+..++.|+.+ ..+..||..+. . .+.+..+.....-.++....+. +
T Consensus 90 ~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l 163 (342)
T 1yfq_A 90 PSFQALTNNEANLGICRICKYGDDKLIAASWD-----GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-L 163 (342)
T ss_dssp SSEEECBSCCCCSCEEEEEEETTTEEEEEETT-----SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-E
T ss_pred CceEeccccCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-E
Confidence 87655543111111122222335566666655 35777776530 0 2222233323233344444555 5
Q ss_pred EEcCCCCCCccceEEEEeCCC-Cc--EEEcCCCCCCccceEEEEE--CCEEEEEcccCC
Q psy14726 542 VIGGFNGMSRMCNGEKYNPVT-KT--WSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNG 595 (712)
Q Consensus 542 v~GG~~~~~~~~~v~~yd~~~-~~--W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 595 (712)
+.|+.+ ..+..||..+ .. ...... +....-.+++.. ++..+++|+.++
T Consensus 164 ~~~~~d-----~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~dg 216 (342)
T 1yfq_A 164 IVGMNN-----SQVQWFRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGYACSSIDG 216 (342)
T ss_dssp EEEEST-----TEEEEEESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEEEEEETTS
T ss_pred EEEeCC-----CeEEEEECCccccccceeeec-CCCCceeEEEECCCCCCEEEEEecCC
Confidence 555432 5788999887 32 222211 111112233333 467888888655
No 247
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=93.56 E-value=7.3 Score=39.71 Aligned_cols=71 Identities=15% Similarity=0.157 Sum_probs=42.4
Q ss_pred CCEEEEEcCCCC-----CCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 537 HECIYVIGGFNG-----MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 537 ~~~iyv~GG~~~-----~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
++++|+....++ ......++.+|..+.+ .+..++.+. ..+++.. +..+|+.++ +.+.+||+++
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~-p~~ia~spdg~~l~v~n~-------~~v~v~D~~t 334 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD-ALSMTIDQQRNLMLTLDG-------GNVNVYDISQ 334 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT-CCEEEEETTTTEEEEECS-------SCEEEEECSS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC-eeEEEECCCCCEEEEeCC-------CeEEEEECCC
Confidence 478999754111 1124689999998874 443344444 4555554 456666542 4789999988
Q ss_pred CeEEEccC
Q psy14726 610 DEWYEATD 617 (712)
Q Consensus 610 ~~W~~~~~ 617 (712)
+.=+.+..
T Consensus 335 ~~l~~~~~ 342 (361)
T 2oiz_A 335 PEPKLLRT 342 (361)
T ss_dssp SSCEEEEE
T ss_pred CcceeeEE
Confidence 62244444
No 248
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=93.49 E-value=1.7 Score=43.28 Aligned_cols=149 Identities=11% Similarity=-0.004 Sum_probs=77.5
Q ss_pred EEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCc-ceeEEEE-ECC-eEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 398 NIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKR-CYVSTAV-HHD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 398 ~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r-~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
.+++.++. ...+..+|+.+++....-..+... ..+.++. -++ .+|+.++. ...+++||+.+.+-...
T Consensus 2 ~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~ 71 (337)
T 1pby_B 2 DYILAPAR-----PDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK-----SESLVKIDLVTGETLGR 71 (337)
T ss_dssp EEEEEEET-----TTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT-----TTEEEEEETTTCCEEEE
T ss_pred cEEEEcCC-----CCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC-----CCeEEEEECCCCCeEee
Confidence 34555553 256899999988764433333211 1122333 345 67776542 25799999988765432
Q ss_pred ccCCc----cccceeEEEE-CC-EEEEEcccC---CCC---ccCceEEeeCCCCeeEEeCCCCCCCcceEEEE-ECC-EE
Q psy14726 475 APMNV----ERSDASATTL-QG-KIYITGGFN---GHN---CLNSCEVYDPECNQWTLIEPMRHRRSGVSCIA-YHE-CI 540 (712)
Q Consensus 475 ~~~p~----~r~~~~~~~~-~~-~iyv~GG~~---~~~---~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~-~i 540 (712)
-+.+. ...-+.++.- ++ .+|+..+.. ... ....+.+||..+.+....-+.+.. -..++. -++ .|
T Consensus 72 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l 149 (337)
T 1pby_B 72 IDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ--ITMLAWARDGSKL 149 (337)
T ss_dssp EECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS--CCCEEECTTSSCE
T ss_pred EEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC--cceeEECCCCCEE
Confidence 22211 0011222222 44 677764210 001 136799999988775433222211 122222 244 47
Q ss_pred EEEcCCCCCCccceEEEEeCCCCcEE
Q psy14726 541 YVIGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 541 yv~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
|+.+ ..+..||+.+.+-.
T Consensus 150 ~~~~--------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 150 YGLG--------RDLHVMDPEAGTLV 167 (337)
T ss_dssp EEES--------SSEEEEETTTTEEE
T ss_pred EEeC--------CeEEEEECCCCcEe
Confidence 7662 46899999887654
No 249
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=93.46 E-value=6.6 Score=44.08 Aligned_cols=176 Identities=11% Similarity=0.084 Sum_probs=86.6
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCC-CCCcceeEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPM-NFKRCYVSTA 440 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-~~~r~~~~~~ 440 (712)
..|..+|..++.-...-.. ....-.+++.. ++..++.|+.+ ..+..+|.....-..+... ...+....++
T Consensus 452 g~v~vwd~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~s~D-----~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~ 523 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVG---HTKDVLSVAFSLDNRQIVSASRD-----RTIKLWNTLGECKYTISEGGEGHRDWVSCV 523 (694)
T ss_dssp SEEEEEETTTTEEEEEEEC---CSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEECSSTTSCSSCEEEE
T ss_pred CcEEEEECCCCcceeEEeC---CCCCEEEEEEeCCCCEEEEEeCC-----CEEEEEECCCCcceeeccCCCCCCCcEEEE
Confidence 3577888777654321011 01111223332 56666777754 3577788765443333221 1122222222
Q ss_pred EE--CC--eEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCC
Q psy14726 441 VH--HD--VIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPE 514 (712)
Q Consensus 441 ~~--~~--~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 514 (712)
.+ ++ ..++.|+.+ ..+.+||..+.+-... +........++.+ ++++++.||.++ .+..||..
T Consensus 524 ~~~~~~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~Dg-----~i~iwd~~ 591 (694)
T 3dm0_A 524 RFSPNTLQPTIVSASWD-----KTVKVWNLSNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKDG-----VVLLWDLA 591 (694)
T ss_dssp EECSCSSSCEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----BCEEEETT
T ss_pred EEeCCCCcceEEEEeCC-----CeEEEEECCCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCCC-----eEEEEECC
Confidence 22 22 456666644 4588899877654322 1111111222233 677888888664 57888888
Q ss_pred CCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcE
Q psy14726 515 CNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTW 565 (712)
Q Consensus 515 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 565 (712)
+.+- +..+.....-.+++...+..++++|.+ ..+..||..+.+-
T Consensus 592 ~~~~--~~~~~~~~~v~~~~~sp~~~~l~~~~~-----~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 592 EGKK--LYSLEANSVIHALCFSPNRYWLCAATE-----HGIKIWDLESKSI 635 (694)
T ss_dssp TTEE--EECCBCSSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTEE
T ss_pred CCce--EEEecCCCcEEEEEEcCCCcEEEEEcC-----CCEEEEECCCCCC
Confidence 7753 222222222333333333333444322 4588889887653
No 250
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=93.45 E-value=1.2 Score=50.01 Aligned_cols=196 Identities=9% Similarity=-0.030 Sum_probs=107.4
Q ss_pred ceEEEEECC--C-CcEEEeCCCCC----CcceeEEEEECCeEEEEcccCC-----CCCCceeEEeecCC------CceEE
Q psy14726 412 NSCRCFNAV--T-KVWKEIAPMNF----KRCYVSTAVHHDVIYAMGGYNG-----QRRQNSVEKYNYTE------NQWSL 473 (712)
Q Consensus 412 ~~v~~yd~~--~-~~W~~~~~~~~----~r~~~~~~~~~~~iyv~GG~~~-----~~~~~~v~~yd~~~------~~W~~ 473 (712)
..+|.+|.. + +....+...+. .+.......-+|+.++++.... .....+++.+|..+ .+...
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 181 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE 181 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence 568999987 4 66666665431 2222223334665555544321 12336799999988 66665
Q ss_pred cc-cCCccccceeEEEECCEEEEEcccCCCC---ccCceEEeeCC-CC---eeEEeCCCCCCCcceEEE-EECCEEEEEc
Q psy14726 474 IA-PMNVERSDASATTLQGKIYITGGFNGHN---CLNSCEVYDPE-CN---QWTLIEPMRHRRSGVSCI-AYHECIYVIG 544 (712)
Q Consensus 474 ~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~---~~~~v~~yd~~-~~---~W~~~~~~p~~r~~~~~~-~~~~~iyv~G 544 (712)
+. .-+ ......+..-+|+..++...+... ...+++.+|.. ++ ....+..-.. ....... .-+|++|+.+
T Consensus 182 l~~~~~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~-~~~~~~~~spdg~l~~~~ 259 (662)
T 3azo_A 182 LSDDAH-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPE-EAIAQAEWAPDGSLIVAT 259 (662)
T ss_dssp SSCSCS-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETT-BCEEEEEECTTSCEEEEE
T ss_pred EEecCC-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCC-ceEcceEECCCCeEEEEE
Confidence 54 221 111111222266544444433211 13579999998 56 4444432111 1112222 2367788777
Q ss_pred CCCCCCccceEEEEeCCCCcEEEcCCCCCCc----c---ceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEcc
Q psy14726 545 GFNGMSRMCNGEKYNPVTKTWSQVPDMYNPR----S---NFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 545 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r----~---~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 616 (712)
..++ ...++.+|+.+.+|..+....... . ....+.. ++++++.+.. + ...+|.+|+.++....+.
T Consensus 260 ~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~---~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 260 DRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G---AAVLGILDPESGELVDAA 332 (662)
T ss_dssp CTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S---SCEEEEEETTTTEEEECC
T ss_pred CCCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C---ccEEEEEECCCCcEEEec
Confidence 6442 347999999899998885432111 0 1123333 6777777665 3 246888899888877663
No 251
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=93.41 E-value=7 Score=39.08 Aligned_cols=213 Identities=8% Similarity=-0.052 Sum_probs=106.5
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+.+++++.. ...+..||+.++....+.. + ..-.+++.. ++.+++... ..+++||+.+++...
T Consensus 61 ~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~---~--~~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 61 GTAWWFNIL-----ERELHELHLASGRKTVHAL---P--FMGSALAKISDSKQLIASD-------DGLFLRDTATGVLTL 123 (326)
T ss_dssp TEEEEEEGG-----GTEEEEEETTTTEEEEEEC---S--SCEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEE
T ss_pred CEEEEEECC-----CCEEEEEECCCCcEEEEEC---C--CcceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEE
Confidence 456665532 2468899998877654322 1 122333333 778877542 359999999999877
Q ss_pred eCCCCC----CcceeEEEEECCeEEEEcccC-CCCCCceeEEeecCCCceEEcccCCccccceeEEEE-CC-EEEEEccc
Q psy14726 427 IAPMNF----KRCYVSTAVHHDVIYAMGGYN-GQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QG-KIYITGGF 499 (712)
Q Consensus 427 ~~~~~~----~r~~~~~~~~~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~ 499 (712)
+...+. .+.....+.-+|++|+..... .......++++| +.+...+..- .....+.+.- ++ .+|+....
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~--~~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFAD--ISIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEE--ESSEEEEEECTTSCEEEEEETT
T ss_pred EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCC--CcccCCeEEcCCCCEEEEEECC
Confidence 654322 122222233467887743211 112346789998 5665544210 0111122222 44 58886532
Q ss_pred CCCCccCceEEeeCC--CC-eeE---EeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCC
Q psy14726 500 NGHNCLNSCEVYDPE--CN-QWT---LIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM 571 (712)
Q Consensus 500 ~~~~~~~~v~~yd~~--~~-~W~---~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 571 (712)
.+.+++||.. ++ ... .+..++..........+ ++.||+.... ...+.+||+....-..+. .
T Consensus 200 -----~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~-----~~~v~~~d~~g~~~~~i~-~ 268 (326)
T 2ghs_A 200 -----VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG-----EGAVDRYDTDGNHIARYE-V 268 (326)
T ss_dssp -----TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET-----TTEEEEECTTCCEEEEEE-C
T ss_pred -----CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeC-----CCEEEEECCCCCEEEEEE-C
Confidence 2568888865 44 211 11111111111122233 5678886521 247899999544333332 2
Q ss_pred CCCccceEEEEE---C-CEEEEEcccC
Q psy14726 572 YNPRSNFAIEVI---D-DMIFAIGGFN 594 (712)
Q Consensus 572 p~~r~~~~~~~~---~-~~i~v~GG~~ 594 (712)
|.. ....+.+ + +.||+.....
T Consensus 269 ~~~--~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 269 PGK--QTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp SCS--BEEEEEEESTTSCEEEEEEBCT
T ss_pred CCC--CcEEEEEecCCCCEEEEEecCC
Confidence 321 2233333 2 4677765443
No 252
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.40 E-value=9.1 Score=43.55 Aligned_cols=183 Identities=14% Similarity=0.119 Sum_probs=100.3
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++.|+|... +.+++||+.++++...... ....-.+++..+|.|++... +.+++||+.++++....
T Consensus 73 ~g~lWigT~-------~Gl~~yd~~~~~f~~~~~~-~~~~i~~i~~~~g~lWigt~-------~Gl~~~~~~~~~~~~~~ 137 (758)
T 3ott_A 73 NTYLYMGTD-------NGILVYNYRADRYEQPETD-FPTDVRTMALQGDTLWLGAL-------NGLYTYQLQSRKLTSFD 137 (758)
T ss_dssp TTEEEEEET-------TEEEEEETTTTEECCCSCC-CCSCEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEEC
T ss_pred CCcEEEEeC-------CCeEEEeCCCCEEECcccC-CCceEEEEEecCCcEEEEcC-------CcceeEeCCCCeEEEec
Confidence 677876532 4589999999887652111 11112233445788887421 35899999999887662
Q ss_pred cCC--ccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCC-C---CcceEEEEE--CCEEEEEcC
Q psy14726 476 PMN--VERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRH-R---RSGVSCIAY--HECIYVIGG 545 (712)
Q Consensus 476 ~~p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~-~---r~~~~~~~~--~~~iyv~GG 545 (712)
..+ .+......... ++.|+|.. . +.+.+||+.+++++....... . ..-.+++.. ++.|+|..
T Consensus 138 ~~~~~l~~~~i~~i~~d~~g~lWigt--~-----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt- 209 (758)
T 3ott_A 138 TRRNGLPNNTIYSIIRTKDNQIYVGT--Y-----NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT- 209 (758)
T ss_dssp HHHHCCSCSCEEEEEECTTCCEEEEE--T-----TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE-
T ss_pred cCCCCcCCCeEEEEEEcCCCCEEEEe--C-----CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEE-
Confidence 211 11111112222 67888732 1 348899999998876642111 0 111223333 24577732
Q ss_pred CCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 546 FNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 546 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
...+.+||+.++++.....++.. .-.+++.- ++.|+|-- . ..+.+||+.++.+...
T Consensus 210 ------~~Gl~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWigT-~------~Gl~~~~~~~~~~~~~ 266 (758)
T 3ott_A 210 ------EGYLFQYFPSTGQIKQTEAFHNN-SIKSLALDGNGDLLAGT-D------NGLYVYHNDTTPLQHI 266 (758)
T ss_dssp ------EEEEEEEETTTTEEEEEEEEEEE-EEEEEEECTTCCEEEEE-T------TEEEEECCTTSCCEEE
T ss_pred ------CCCCeEEcCCCCeEEeccCCCCC-eEEEEEEcCCCCEEEEe-C------CceeEEecCCCcEEEE
Confidence 13588999999988765433211 11122222 55666542 1 1367788877776554
No 253
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.39 E-value=3.4 Score=41.48 Aligned_cols=184 Identities=11% Similarity=0.098 Sum_probs=94.0
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
+.+++.|+.+ ..+..||..+........+...... .+++. -++..++.|+.+ ..+..||..+.+....
T Consensus 54 g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 54 GNFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD-----KTAKMWDLSSNQAIQI 123 (368)
T ss_dssp SEEEEEEETT-----SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred ceEEEEECCC-----CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-----CcEEEEEcCCCCceee
Confidence 4788888754 3578888876332221111111111 22222 256677777643 4688999988876544
Q ss_pred ccCCccccceeEEE---ECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCc
Q psy14726 475 APMNVERSDASATT---LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSR 551 (712)
Q Consensus 475 ~~~p~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 551 (712)
.... ..-.+++. -++.+++.|+.++ .+..||..+.+-...- .......+.....+.+++.++
T Consensus 124 ~~~~--~~v~~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------ 188 (368)
T 3mmy_A 124 AQHD--APVKTIHWIKAPNYSCVMTGSWDK-----TLKFWDTRSSNPMMVL--QLPERCYCADVIYPMAVVATA------ 188 (368)
T ss_dssp EECS--SCEEEEEEEECSSCEEEEEEETTS-----EEEEECSSCSSCSEEE--ECSSCEEEEEEETTEEEEEEG------
T ss_pred cccc--CceEEEEEEeCCCCCEEEEccCCC-----cEEEEECCCCcEEEEE--ecCCCceEEEecCCeeEEEeC------
Confidence 2211 11122222 2677788887663 5888888766422111 112223334444565555544
Q ss_pred cceEEEEeCCCC--cEEEcCCCCCCccceEEEEEC----CEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 552 MCNGEKYNPVTK--TWSQVPDMYNPRSNFAIEVID----DMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 552 ~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~----~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
...+..||.... .+..+...............+ ...++.|+.++ .+.+||....
T Consensus 189 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg-----~i~i~~~~~~ 248 (368)
T 3mmy_A 189 ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEG-----RVAIHYINPP 248 (368)
T ss_dssp GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTS-----EEEEEESSCS
T ss_pred CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCC-----cEEEEecCCC
Confidence 256778887654 344443322111111122222 23367777655 5677777654
No 254
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=93.38 E-value=2.8 Score=38.73 Aligned_cols=142 Identities=9% Similarity=0.067 Sum_probs=82.4
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCC--ceE--Ec----ccCCccccceeEEEE--CCEEEEEcccCCCCccCc
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTEN--QWS--LI----APMNVERSDASATTL--QGKIYITGGFNGHNCLNS 507 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~--~~----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 507 (712)
+++..+|++|+|=| +.+|+++.... ... .+ +.+|.. .. ++... ++++|++-| +.
T Consensus 11 Ai~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-ID-Aa~~~~~~~~~yfFkG-------~~ 74 (195)
T 1itv_A 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRK-LD-SVFEEPLSKKLFFFSG-------RQ 74 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS-CS-EEEECTTTCCEEEEET-------TE
T ss_pred EEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCCC-cc-EEEEECCCCeEEEEeC-------CE
Confidence 35567999999977 56888876552 221 11 234431 11 22222 688999987 45
Q ss_pred eEEeeCCCCee-EEeC--CCCCC--CcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEE-----c----CCCCC
Q psy14726 508 CEVYDPECNQW-TLIE--PMRHR--RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-----V----PDMYN 573 (712)
Q Consensus 508 v~~yd~~~~~W-~~~~--~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~p~ 573 (712)
.|+|+..+..- ..+. .+|.. ...++....++++|++-| +..|+||..+++=.. + +.+|
T Consensus 75 yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp- 146 (195)
T 1itv_A 75 VWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFPGVP- 146 (195)
T ss_dssp EEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHSTTSC-
T ss_pred EEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcCCCCC-
Confidence 77887542111 1111 12321 233333333689999987 578999987653211 1 1222
Q ss_pred CccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 574 PRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 574 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
..-.++...++.+|++-|. ..|.||..+.+
T Consensus 147 -~~idaa~~~~g~~Yffkg~-------~y~~~~~~~~~ 176 (195)
T 1itv_A 147 -LDTHDVFQFREKAYFCQDR-------FYWRVSSRSEL 176 (195)
T ss_dssp -SSCSEEEEETTEEEEEETT-------EEEEEECCTTC
T ss_pred -CCCCEEEEeCCeEEEEeCC-------EEEEEECCccE
Confidence 2234555668999999773 57899987765
No 255
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=93.06 E-value=3.7 Score=41.34 Aligned_cols=186 Identities=9% Similarity=0.008 Sum_probs=92.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEE-e--CCCCCCcce--eEEEEECCeEEEEcccCCCCCCceeEEeecCCCc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE-I--APMNFKRCY--VSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ 470 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~-~--~~~~~~r~~--~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 470 (712)
++.+++.||.++ .+..||..+++-.. + .....-... ...+..++.|.+... ...+..||..+.+
T Consensus 47 d~~~l~sg~~Dg-----~v~iwd~~~~~~~~~~~~~~v~~~~~~~~~~s~s~D~~i~~w~~------~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 47 DKWVCMCRCEDG-----ALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLYP------GNQITILDSKTNK 115 (343)
T ss_dssp EEEEEEEEEETT-----EEEEEEESSSSCEEEEEEECCCTTCCCCSEEEECSTTEEEEEET------TTEEEEEETTTCC
T ss_pred CCCEEEEECCCC-----cEEEEECCCCcEEEEEecCCceeeeeCCceEEecCCCeEEEEEc------cCceEEeecCCcc
Confidence 466777888643 57888877665321 1 111100000 222233444544422 1345667766665
Q ss_pred eEEcccCCccccceeEEEE----CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEE-ECCEEEEEcC
Q psy14726 471 WSLIAPMNVERSDASATTL----QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIA-YHECIYVIGG 545 (712)
Q Consensus 471 W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG 545 (712)
-...-..+... ....+.+ ++.+++.|+.++ .+..||..+++-...........-.+++. -++.+++.|+
T Consensus 116 ~~~~~~~~~~~-~v~~~~~~~~~~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~ 189 (343)
T 3lrv_A 116 VLREIEVDSAN-EIIYMYGHNEVNTEYFIWADNRG-----TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYS 189 (343)
T ss_dssp EEEEEECCCSS-CEEEEECCC---CCEEEEEETTC-----CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEEC
T ss_pred eeEEeecCCCC-CEEEEEcCCCCCCCEEEEEeCCC-----cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEc
Confidence 22111111111 1111111 566777787664 58889988877644332222212222332 2677888887
Q ss_pred CCCCCccceEEEEeCCCCcEE--EcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 546 FNGMSRMCNGEKYNPVTKTWS--QVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 546 ~~~~~~~~~v~~yd~~~~~W~--~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
.+ ..+..||..+.+-. .+.. . .......+.+ ++..++.|+ ++ .+.+||+.+..
T Consensus 190 ~d-----g~i~iwd~~~~~~~~~~~~~-~-h~~~v~~l~fs~~g~~l~s~~-~~-----~v~iwd~~~~~ 246 (343)
T 3lrv_A 190 PD-----GILDVYNLSSPDQASSRFPV-D-EEAKIKEVKFADNGYWMVVEC-DQ-----TVVCFDLRKDV 246 (343)
T ss_dssp TT-----SCEEEEESSCTTSCCEECCC-C-TTSCEEEEEECTTSSEEEEEE-SS-----BEEEEETTSST
T ss_pred CC-----CEEEEEECCCCCCCccEEec-c-CCCCEEEEEEeCCCCEEEEEe-CC-----eEEEEEcCCCC
Confidence 64 57889999876532 2211 0 1112222333 666777777 32 58889987753
No 256
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=93.01 E-value=4.4 Score=40.77 Aligned_cols=140 Identities=14% Similarity=0.141 Sum_probs=65.8
Q ss_pred eEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 349 ILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 349 ~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
.+++.|+.+ ..+..+|..+++....-.. ....-.+++.. ++..++.||.+ ..+..||.....-...
T Consensus 89 ~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~---h~~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~~~~~~~~~ 155 (343)
T 2xzm_R 89 CFAISSSWD-----KTLRLWDLRTGTTYKRFVG---HQSEVYSVAFSPDNRQILSAGAE-----REIKLWNILGECKFSS 155 (343)
T ss_dssp TEEEEEETT-----SEEEEEETTSSCEEEEEEC---CCSCEEEEEECSSTTEEEEEETT-----SCEEEEESSSCEEEEC
T ss_pred CEEEEEcCC-----CcEEEEECCCCcEEEEEcC---CCCcEEEEEECCCCCEEEEEcCC-----CEEEEEeccCCceeee
Confidence 345555532 3678889887765431011 11112233333 56666777754 3578888765433332
Q ss_pred CCCCCCcceeEEEEEC------------CeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEE
Q psy14726 428 APMNFKRCYVSTAVHH------------DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKI 493 (712)
Q Consensus 428 ~~~~~~r~~~~~~~~~------------~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i 493 (712)
............+.+. +..++.||.+ ..+..||..... ...+.........+.+ +++.
T Consensus 156 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~---~~~~~~h~~~v~~~~~s~~g~~ 227 (343)
T 2xzm_R 156 AEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD-----GRLKVWNTNFQI---RYTFKAHESNVNHLSISPNGKY 227 (343)
T ss_dssp CTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT-----SEEEEEETTTEE---EEEEECCSSCEEEEEECTTSSE
T ss_pred ecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC-----CEEEEEcCCCce---eEEEcCccccceEEEECCCCCE
Confidence 2221111111222221 1456666643 457777733221 1111111111222233 6777
Q ss_pred EEEcccCCCCccCceEEeeCC
Q psy14726 494 YITGGFNGHNCLNSCEVYDPE 514 (712)
Q Consensus 494 yv~GG~~~~~~~~~v~~yd~~ 514 (712)
++.||.++ .+..||..
T Consensus 228 l~sgs~dg-----~v~iwd~~ 243 (343)
T 2xzm_R 228 IATGGKDK-----KLLIWDIL 243 (343)
T ss_dssp EEEEETTC-----EEEEEESS
T ss_pred EEEEcCCC-----eEEEEECC
Confidence 78887664 57778763
No 257
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=92.97 E-value=3.9 Score=46.05 Aligned_cols=188 Identities=10% Similarity=0.055 Sum_probs=95.6
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++.+++.|+.+ ..+..+|..+++-...-.-... .-.+++. .++..++.|+.+ ..+.+||.....-..+
T Consensus 441 ~g~~l~sgs~D-----g~v~vwd~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~D-----~~i~iwd~~~~~~~~~ 509 (694)
T 3dm0_A 441 DGQFALSGSWD-----GELRLWDLAAGVSTRRFVGHTK-DVLSVAFSLDNRQIVSASRD-----RTIKLWNTLGECKYTI 509 (694)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSS-CEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcceeEEeCCCC-CEEEEEEeCCCCEEEEEeCC-----CEEEEEECCCCcceee
Confidence 66777788754 4688999887754321111111 1122222 356666777654 4577788655432222
Q ss_pred ccCCcc-ccceeEEEE--CC--EEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCC
Q psy14726 475 APMNVE-RSDASATTL--QG--KIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFN 547 (712)
Q Consensus 475 ~~~p~~-r~~~~~~~~--~~--~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 547 (712)
.....+ +....++.+ ++ ..++.|+.++ .+.+||..+.+-... +.........+.+ ++.+++.||.+
T Consensus 510 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~-----~v~vwd~~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~D 582 (694)
T 3dm0_A 510 SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDK-----TVKVWNLSNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKD 582 (694)
T ss_dssp CSSTTSCSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccCCCCCCCcEEEEEEeCCCCcceEEEEeCCC-----eEEEEECCCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 111111 112223333 22 4666676553 588888877654322 1111112222223 57778888764
Q ss_pred CCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 548 GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
..+..||..+.+-.. .+.....-.+++...+..++.+|.++ .+.+||..+++-.
T Consensus 583 -----g~i~iwd~~~~~~~~--~~~~~~~v~~~~~sp~~~~l~~~~~~-----~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 583 -----GVVLLWDLAEGKKLY--SLEANSVIHALCFSPNRYWLCAATEH-----GIKIWDLESKSIV 636 (694)
T ss_dssp -----SBCEEEETTTTEEEE--CCBCSSCEEEEEECSSSSEEEEEETT-----EEEEEETTTTEEE
T ss_pred -----CeEEEEECCCCceEE--EecCCCcEEEEEEcCCCcEEEEEcCC-----CEEEEECCCCCCh
Confidence 467788988765322 22222223344444333344444332 4888998887543
No 258
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=92.71 E-value=4.2 Score=40.73 Aligned_cols=186 Identities=12% Similarity=0.006 Sum_probs=98.5
Q ss_pred ccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE
Q psy14726 410 YYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL 489 (712)
Q Consensus 410 ~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 489 (712)
....++.+|..+++-..+ .........-+|+.+++...........++.+|..+.+...+...+. ......
T Consensus 41 ~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~----~~~~~w 111 (347)
T 2gop_A 41 YENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN----IRSLEW 111 (347)
T ss_dssp EEEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE----EEEEEE
T ss_pred ccceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC----ccceeE
Confidence 356789999998876665 11112222335654444433221223569999998888776654432 222233
Q ss_pred --CCEEEEEcccC------------------CC----CccCceEEeeCCCCee-EEeCCCCCCCcceEEEEECCEEEEEc
Q psy14726 490 --QGKIYITGGFN------------------GH----NCLNSCEVYDPECNQW-TLIEPMRHRRSGVSCIAYHECIYVIG 544 (712)
Q Consensus 490 --~~~iyv~GG~~------------------~~----~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~~~~iyv~G 544 (712)
+++.++++... +. .....++.+|..+++. ..+.. + .........+.+++.+
T Consensus 112 spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg~~~~~ 187 (347)
T 2gop_A 112 NEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDKIVVNV 187 (347)
T ss_dssp CTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTEEEEEE
T ss_pred CCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCeEEEEE
Confidence 55433333321 00 1135689999999887 66654 3 2223333333355555
Q ss_pred CCCCCC---c-cceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCC---ceeeeEEEEECCCCeEEEcc
Q psy14726 545 GFNGMS---R-MCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGV---TTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 545 G~~~~~---~-~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~---~~~~~v~~yd~~~~~W~~~~ 616 (712)
..+... . ...++.+| +.++..+..- .......-+++.+++++.... .....++++| ++++..+.
T Consensus 188 ~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 188 PHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp ECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS
T ss_pred ecccccccccccccEEEeC--CCceEEeccC----cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEecc
Confidence 433221 1 45788888 6777766432 112222446654444443221 1234789999 66776663
No 259
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=92.69 E-value=0.077 Score=55.12 Aligned_cols=140 Identities=14% Similarity=0.113 Sum_probs=57.4
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCC--ce
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTEN--QW 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W 471 (712)
++.||+.+. + ..++.+|..+++ |+.-. .. ...+.++.++++|+.|+.+ ..++.+|..+. .|
T Consensus 9 ~~~v~~gs~-d-----g~v~a~d~~tG~~~W~~~~--~~--~~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~~~w 73 (369)
T 2hz6_A 9 ETLLFVSTL-D-----GSLHAVSKRTGSIKWTLKE--DP--VLQVPTHVEEPAFLPDPND-----GSLYTLGSKNNEGLT 73 (369)
T ss_dssp TTEEEEEET-T-----SEEEEEETTTCCEEEEEEC--CC--SCCCC-----CCEEECTTT-----CCEEEC-----CCSE
T ss_pred CCEEEEEcC-C-----CEEEEEECCCCCEEEEecC--CC--ceecceEcCCCEEEEeCCC-----CEEEEEECCCCceee
Confidence 566665432 2 368999998876 76533 11 1122344567788876533 45899998654 46
Q ss_pred EEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCe--eEEeCCCCCCCcceEEEEECCEEEEEcCCCCC
Q psy14726 472 SLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ--WTLIEPMRHRRSGVSCIAYHECIYVIGGFNGM 549 (712)
Q Consensus 472 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 549 (712)
..-...+.......+...++.+|+ |+.+ ..+..+|+.+++ |+.-..-. .+ .+..++.+|+.+ .
T Consensus 74 ~~~~~~~~~~~~sp~~~~~~~v~~-g~~d-----g~v~a~D~~tG~~~w~~~~~~~-~~----~~p~~~~v~~~~-~--- 138 (369)
T 2hz6_A 74 KLPFTIPELVQASPCRSSDGILYM-GKKQ-----DIWYVIDLLTGEKQQTLSSAFA-DS----LSPSTSLLYLGR-T--- 138 (369)
T ss_dssp ECSCCHHHHHTTCSCC-----CCC-CEEE-----EEEEEECCC---------------------------EEEEE-E---
T ss_pred eeeccCccccccCceEecCCEEEE-EeCC-----CEEEEEECCCCcEEEEecCCCc-cc----ccccCCEEEEEe-c---
Confidence 532221111111111113555554 3322 458899988765 65433211 01 111345565543 2
Q ss_pred CccceEEEEeCCCCc--EEE
Q psy14726 550 SRMCNGEKYNPVTKT--WSQ 567 (712)
Q Consensus 550 ~~~~~v~~yd~~~~~--W~~ 567 (712)
-..+.++|+.+.+ |+.
T Consensus 139 --dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 139 --EYTITMYDTKTRELRWNA 156 (369)
T ss_dssp --EEEEECCCSSSSSCCCEE
T ss_pred --CCEEEEEECCCCCEEEeE
Confidence 2467888887654 764
No 260
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=92.51 E-value=7.9 Score=38.40 Aligned_cols=222 Identities=9% Similarity=0.055 Sum_probs=104.1
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE 426 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 426 (712)
+..++.|+.+ ..+..+|..+++-...-.. . ...-.++++. ++.+++.|+.++ .+..||.....-..
T Consensus 77 g~~l~s~s~D-----~~v~~wd~~~~~~~~~~~~--h-~~~v~~~~~~~~~~~l~s~s~D~-----~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 77 GAYALSASWD-----KTLRLWDVATGETYQRFVG--H-KSDVMSVDIDKKASMIISGSRDK-----TIKVWTIKGQCLAT 143 (319)
T ss_dssp SSEEEEEETT-----SEEEEEETTTTEEEEEEEC--C-SSCEEEEEECTTSCEEEEEETTS-----CEEEEETTSCEEEE
T ss_pred CCEEEEEeCC-----CEEEEEECCCCCeeEEEcc--C-CCcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCeEEE
Confidence 3345555532 4688899887764331111 0 1111222222 566777777543 47788876554433
Q ss_pred eCCCCCCcceeEEEEE-------CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEc
Q psy14726 427 IAPMNFKRCYVSTAVH-------HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITG 497 (712)
Q Consensus 427 ~~~~~~~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 497 (712)
+..-.. .-..+... ++..++.||.+ ..+..||..+.+-.. .+..-.....++.+ ++++++.|
T Consensus 144 ~~~h~~--~v~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~--~~~~h~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 144 LLGHND--WVSQVRVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQIEA--DFIGHNSNINTLTASPDGTLIASA 214 (319)
T ss_dssp ECCCSS--CEEEEEECCC------CCEEEEEETT-----SCEEEEETTTTEEEE--EECCCCSCEEEEEECTTSSEEEEE
T ss_pred EeccCC--cEEEEEEccCCCCCCCccEEEEEeCC-----CEEEEEECCcchhhe--eecCCCCcEEEEEEcCCCCEEEEE
Confidence 321111 11122221 23456666643 457888887654321 11111111122223 67788888
Q ss_pred ccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCc-EEEcC-CCCCC
Q psy14726 498 GFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKT-WSQVP-DMYNP 574 (712)
Q Consensus 498 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~-~~p~~ 574 (712)
|.++ .+..||..+.+-...-.... .-.+++.. ++.+++.+.. ..+..|+..... +..+. .....
T Consensus 215 ~~dg-----~i~iwd~~~~~~~~~~~~~~--~v~~~~~sp~~~~la~~~~------~~i~v~~~~~~~~~~~~~~~~~~~ 281 (319)
T 3frx_A 215 GKDG-----EIMLWNLAAKKAMYTLSAQD--EVFSLAFSPNRYWLAAATA------TGIKVFSLDPQYLVDDLRPEFAGY 281 (319)
T ss_dssp ETTC-----EEEEEETTTTEEEEEEECCS--CEEEEEECSSSSEEEEEET------TEEEEEEETTEEEEEEECCCCTTC
T ss_pred eCCC-----eEEEEECCCCcEEEEecCCC--cEEEEEEcCCCCEEEEEcC------CCcEEEEeCcCeeeeccCcccccc
Confidence 7664 58888887765322111111 11222222 4444444432 345566655432 22222 11110
Q ss_pred ----ccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 575 ----RSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 575 ----r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
......+.+ +++.++.|+.++ .+.+||..+
T Consensus 282 ~~~~~~~v~~~~~spdg~~l~sg~~Dg-----~i~vWd~~t 317 (319)
T 3frx_A 282 SKAAEPHAVSLAWSADGQTLFAGYTDN-----VIRVWQVMT 317 (319)
T ss_dssp CGGGCCCEEEEEECTTSSEEEEEETTS-----CEEEEEEEE
T ss_pred ccCcCcceeEEEECCCCCEEEEeecCc-----eEEEEEEee
Confidence 011112222 778888888766 456666543
No 261
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=92.51 E-value=8.5 Score=37.61 Aligned_cols=227 Identities=11% Similarity=0.031 Sum_probs=104.7
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
+..++.|+.+ ..+..+|..+++-...... . .........++.+++.|+.+ ..+..++..+......
T Consensus 79 ~~~l~sgs~D-----g~v~iw~~~~~~~~~~~~~--h--~~~~~~~~~~~~~l~s~~~~-----~~~~~~~~~~~~~~~~ 144 (318)
T 4ggc_A 79 GNYLAVGTSS-----AEVQLWDVQQQKRLRNMTS--H--SARVGSLSWNSYILSSGSRS-----GHIHHHDVRVAEHHVA 144 (318)
T ss_dssp SSEEEEEETT-----SEEEEEETTTTEEEEEEEC--C--SSCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEE
T ss_pred CCEEEEEECC-----CcEEEeecCCceeEEEecC--c--cceEEEeecCCCEEEEEecC-----CceEeeecCCCceeEE
Confidence 3455666643 3678889888765442111 1 11122233345566666643 2345555554433221
Q ss_pred CCC-CCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceE--EcccCCccccceeEEEE---CC-EEEEEcccC
Q psy14726 428 APM-NFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWS--LIAPMNVERSDASATTL---QG-KIYITGGFN 500 (712)
Q Consensus 428 ~~~-~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~--~~~~~p~~r~~~~~~~~---~~-~iyv~GG~~ 500 (712)
... ............+++.++.|+.+ ..+.+||..+.+-. ................. ++ .+++.+|..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 219 (318)
T 4ggc_A 145 TLSGHSQEVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 219 (318)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT
T ss_pred EEcCccCceEEEEEcCCCCEEEEEecC-----cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC
Confidence 111 11111222223355666666644 35778887765321 11111111111111111 22 344444432
Q ss_pred CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEE
Q psy14726 501 GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAI 580 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 580 (712)
...+..+|..+..-..................++.+++.+|.. -..+..||..+.+-. ..+......-..
T Consensus 220 ----~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~----d~~i~iwd~~~~~~~--~~l~gH~~~V~~ 289 (318)
T 4ggc_A 220 ----DRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFA----QNQLVIWKYPTMAKV--AELKGHTSRVLS 289 (318)
T ss_dssp ----TCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTT----TCCEEEEETTTCCEE--EEECCCSSCEEE
T ss_pred ----CCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcC----CCEEEEEECCCCcEE--EEEcCCCCCEEE
Confidence 2457778877766544433222222222222245666665532 246888998765432 222211122222
Q ss_pred EEE--CCEEEEEcccCCCceeeeEEEEECC
Q psy14726 581 EVI--DDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 581 ~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
+.+ ++.+++.||.++ .+.+||..
T Consensus 290 l~~spdg~~l~S~s~D~-----~v~iWd~~ 314 (318)
T 4ggc_A 290 LTMSPDGATVASAAADE-----TLRLWRCF 314 (318)
T ss_dssp EEECTTSSCEEEEETTT-----EEEEECCS
T ss_pred EEEcCCCCEEEEEecCC-----eEEEEECC
Confidence 233 677888888776 45666653
No 262
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=92.48 E-value=6.9 Score=38.94 Aligned_cols=208 Identities=12% Similarity=-0.035 Sum_probs=108.7
Q ss_pred ceEEEEECCCCcEEEeCCCCC------------------CcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNF------------------KRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~------------------~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
..+++||+.++++........ ...-++++.- ++.|||.... ..+.++|+.+...
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~ 113 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY------YHLSVVGSEGGHA 113 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT------TEEEEECTTCEEC
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC------CCEEEEeCCCCEE
Confidence 468888888877665431110 0123456655 5799997321 3488899887766
Q ss_pred EEcccCCcc--ccceeEEEE---CCEEEEEcccCC------------CCccCceEEeeCCCCeeEEeC-CCCCCCcceEE
Q psy14726 472 SLIAPMNVE--RSDASATTL---QGKIYITGGFNG------------HNCLNSCEVYDPECNQWTLIE-PMRHRRSGVSC 533 (712)
Q Consensus 472 ~~~~~~p~~--r~~~~~~~~---~~~iyv~GG~~~------------~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~ 533 (712)
+.+...... -.....+.+ +|.||+.-.... ......+++||+.+.+.+.+. .+..+ .++
T Consensus 114 ~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p---~gi 190 (322)
T 2fp8_A 114 TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVP---GGA 190 (322)
T ss_dssp EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCC---CEE
T ss_pred EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccC---cce
Confidence 555332111 111122223 578998643210 012356999999888766543 22221 233
Q ss_pred EEE-C-CEEEEEcCCCCCCccceEEEEeCCC---CcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCC-----ceeeeE
Q psy14726 534 IAY-H-ECIYVIGGFNGMSRMCNGEKYNPVT---KTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGV-----TTIYHV 602 (712)
Q Consensus 534 ~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~-----~~~~~v 602 (712)
+.. + +.||+.-.. ...|++||+.. ..++.+..++. -.+++.- +|.|||....... .....+
T Consensus 191 a~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~~~~~~~~~g---P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v 262 (322)
T 2fp8_A 191 EVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGTAEVLVKIPN---PGNIKRNADGHFWVSSSEELDGNMHGRVDPKG 262 (322)
T ss_dssp EECTTSSEEEEEEGG-----GTEEEEEESSSTTTTCEEEEEECSS---EEEEEECTTSCEEEEEEEETTSSTTSCEEEEE
T ss_pred EECCCCCEEEEEeCC-----CCeEEEEECCCCcCCccceEEeCCC---CCCeEECCCCCEEEEecCcccccccCCCccEE
Confidence 333 3 358887421 36789999875 34444333322 2233332 5678887432100 112468
Q ss_pred EEEECCCCeEEEccCCCCc---ccceEEEEEcCcceeE
Q psy14726 603 ECYDEKTDEWYEATDMNIY---RSALSACVIMGLPNVY 637 (712)
Q Consensus 603 ~~yd~~~~~W~~~~~~p~~---r~~~~~~~~~~~~~v~ 637 (712)
.+||++...-..+. .|.. ....+++.-++.+|+.
T Consensus 263 ~~~d~~G~~~~~~~-~~~g~~~~~~~~~~~~~g~L~v~ 299 (322)
T 2fp8_A 263 IKFDEFGNILEVIP-LPPPFAGEHFEQIQEHDGLLYIG 299 (322)
T ss_dssp EEECTTSCEEEEEE-CCTTTTTSCCCEEEEETTEEEEE
T ss_pred EEECCCCCEEEEEE-CCCCCccccceEEEEeCCEEEEe
Confidence 99999755444442 2221 1222344456777775
No 263
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.44 E-value=15 Score=40.29 Aligned_cols=119 Identities=12% Similarity=0.165 Sum_probs=63.8
Q ss_pred CcCCCceEEEEeecCCCCCCceEEEEECCCCc--EEEcccCCCC-CCC---cceEEEEECCEEEEEeecCCCCccceEEE
Q psy14726 343 PRVPHEILFAIGGWSGGSPTDFVETYDTRADR--WVKIEQVDPM-GPR---AYHGTAVIGYNIYVIGGFDGNEYYNSCRC 416 (712)
Q Consensus 343 pr~~~~~i~~~GG~~~~~~~~~v~~~d~~~~~--W~~~~~~~~~-~~r---~~~~~~~~~~~lyv~GG~~~~~~~~~v~~ 416 (712)
|-...+.||+.... +.+.++|..+++ |..-...+.. .+. ...+.++.++.||+... ...++.
T Consensus 64 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~A 131 (582)
T 1flg_A 64 AIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASVVA 131 (582)
T ss_dssp CEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEEEE
T ss_pred cEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEEEE
Confidence 44445666665432 248999987664 8763221110 011 12344567888887532 246999
Q ss_pred EECCCCc--EEEeCCCCCCc--ceeEEEEECC------eEEEEcccCCCCCCceeEEeecCCCc--eEE
Q psy14726 417 FNAVTKV--WKEIAPMNFKR--CYVSTAVHHD------VIYAMGGYNGQRRQNSVEKYNYTENQ--WSL 473 (712)
Q Consensus 417 yd~~~~~--W~~~~~~~~~r--~~~~~~~~~~------~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~ 473 (712)
+|..|++ |+.-...+... ...+-++.++ .||+-.+..+......++.||+.+.+ |+.
T Consensus 132 lD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 132 LNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 9999886 87532221111 1112234555 66653221111224579999998765 864
No 264
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=91.94 E-value=4.2 Score=40.40 Aligned_cols=177 Identities=16% Similarity=0.205 Sum_probs=90.7
Q ss_pred EECCEEEEEeecCCCCccceEEEEECC-CCcEEEeCCCCCCcceeEEEEE-CCeEEEEcccCCCCCCceeEEeecCCC-c
Q psy14726 394 VIGYNIYVIGGFDGNEYYNSCRCFNAV-TKVWKEIAPMNFKRCYVSTAVH-HDVIYAMGGYNGQRRQNSVEKYNYTEN-Q 470 (712)
Q Consensus 394 ~~~~~lyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~-~ 470 (712)
+.++.||+... ...+++||+. ...|....+.+. ..+.+.. ++.||+... ...++.||+... .
T Consensus 105 ~~~~~l~v~t~------~~~l~~~d~~g~~~~~~~~~~~~---~~~~~~~~~g~l~vgt~------~~~l~~~d~~g~~~ 169 (330)
T 3hxj_A 105 IFEDILYVTSM------DGHLYAINTDGTEKWRFKTKKAI---YATPIVSEDGTIYVGSN------DNYLYAINPDGTEK 169 (330)
T ss_dssp EETTEEEEECT------TSEEEEECTTSCEEEEEECSSCC---CSCCEECTTSCEEEECT------TSEEEEECTTSCEE
T ss_pred EECCEEEEEec------CCEEEEEcCCCCEEEEEcCCCce---eeeeEEcCCCEEEEEcC------CCEEEEECCCCCEe
Confidence 34888887532 2468999988 334665432221 1222333 678877432 146899998832 3
Q ss_pred eEEcccCCccccceeEEE-ECCEEEEEcccCCCCccCceEEeeCCC-CeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCC
Q psy14726 471 WSLIAPMNVERSDASATT-LQGKIYITGGFNGHNCLNSCEVYDPEC-NQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFN 547 (712)
Q Consensus 471 W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~ 547 (712)
|..-.+ .... .+.+. -++.||+.. ..+.+||... ..|+...... . ..+.+.. ++.||+...
T Consensus 170 ~~~~~~--~~~~-~~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~~~~~--~-~~~~~~~~~g~l~v~t~-- 233 (330)
T 3hxj_A 170 WRFKTN--DAIT-SAASIGKDGTIYFGS--------DKVYAINPDGTEKWNFYAGYW--T-VTRPAISEDGTIYVTSL-- 233 (330)
T ss_dssp EEEECS--SCCC-SCCEECTTCCEEEES--------SSEEEECTTSCEEEEECCSSC--C-CSCCEECTTSCEEEEET--
T ss_pred EEEecC--CCce-eeeEEcCCCEEEEEe--------CEEEEECCCCcEEEEEccCCc--c-eeceEECCCCeEEEEcC--
Confidence 654322 2211 22223 367788754 3588898442 3476553221 1 1222333 457888642
Q ss_pred CCCccceEEEEeCCCCc-EEEcCCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCC-eEEE
Q psy14726 548 GMSRMCNGEKYNPVTKT-WSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTD-EWYE 614 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~-~W~~ 614 (712)
...+.+||+.... |..-...+ .. .+.+.. ++.||+... + ..+.+||+... .|..
T Consensus 234 ----~~gl~~~~~~g~~~~~~~~~~~--~~-~~~~~~~~g~l~v~t~-~-----ggl~~~d~~g~~~~~~ 290 (330)
T 3hxj_A 234 ----DGHLYAINPDGTEKWRFKTGKR--IE-SSPVIGNTDTIYFGSY-D-----GHLYAINPDGTEKWNF 290 (330)
T ss_dssp ----TTEEEEECTTSCEEEEEECSSC--CC-SCCEECTTSCEEEECT-T-----CEEEEECTTSCEEEEE
T ss_pred ----CCeEEEECCCCCEeEEeeCCCC--cc-ccceEcCCCeEEEecC-C-----CCEEEECCCCcEEEEE
Confidence 2467888875443 54432211 11 122333 677776532 2 14788887533 4554
No 265
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.78 E-value=1.7 Score=45.76 Aligned_cols=187 Identities=6% Similarity=0.056 Sum_probs=86.6
Q ss_pred CEEEEEeecCCCCccceEEEEECCCC--------cEEEeCCCCC-CcceeEEEEE-CCe-EEEEcccCCCCCCceeEEee
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTK--------VWKEIAPMNF-KRCYVSTAVH-HDV-IYAMGGYNGQRRQNSVEKYN 465 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~--------~W~~~~~~~~-~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd 465 (712)
+.+++.|+.+ ..+..||..+. ....+..+.. .....+++.. ++. +++.|+.+ ..+..||
T Consensus 141 ~~~lat~~~d-----g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-----g~i~vwd 210 (430)
T 2xyi_A 141 ACVIATKTPS-----SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD-----HTICLWD 210 (430)
T ss_dssp EEEEEEECSS-----SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT-----SCEEEEE
T ss_pred CcEEEEECCC-----CcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC-----CeEEEEe
Confidence 4566776643 35888887652 1111111111 1111223332 334 67777654 4588888
Q ss_pred cCCC---ceEE--cccCCccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCe-eEEeCCCCCCCcceEEEEE
Q psy14726 466 YTEN---QWSL--IAPMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQ-WTLIEPMRHRRSGVSCIAY 536 (712)
Q Consensus 466 ~~~~---~W~~--~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~ 536 (712)
+.+. .+.. ...+.........+.+ ++.+++.|+.+ ..+.+||..+.. ...+..+........++.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 285 (430)
T 2xyi_A 211 INATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSF 285 (430)
T ss_dssp TTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCSCSSSCSEEEECCSSCEEEEEE
T ss_pred CCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCCCCCcceeEeecCCCCeEEEEe
Confidence 8762 2221 1111111111222223 46677777655 468889887652 1111111111122223333
Q ss_pred --CC-EEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE---CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 537 --HE-CIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI---DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 537 --~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
++ .+++.|+.+ ..+..||..+.. ..+..+.........+.+ +..+++.||.++ .+.+||...
T Consensus 286 ~p~~~~~l~tg~~d-----g~v~vwd~~~~~-~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~-----~i~iwd~~~ 353 (430)
T 2xyi_A 286 NPYSEFILATGSAD-----KTVALWDLRNLK-LKLHSFESHKDEIFQVQWSPHNETILASSGTDR-----RLHVWDLSK 353 (430)
T ss_dssp CSSCTTEEEEEETT-----SEEEEEETTCTT-SCSEEEECCSSCEEEEEECSSCTTEEEEEETTS-----CCEEEEGGG
T ss_pred CCCCCCEEEEEeCC-----CeEEEEeCCCCC-CCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC-----cEEEEeCCC
Confidence 23 478888764 468899987531 001111111111222233 335788888665 466777654
No 266
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=91.76 E-value=11 Score=37.43 Aligned_cols=213 Identities=9% Similarity=-0.038 Sum_probs=118.2
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCC----CcEEEe-C-CCCCCcc
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVT----KVWKEI-A-PMNFKRC 435 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~----~~W~~~-~-~~~~~r~ 435 (712)
.|..+|........+. +....-+++++. ++.||+.... ...++++|+.. .....+ + .+..|
T Consensus 11 ~I~~i~~~~~~~~~~~----~~~~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~~p-- 79 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLI----PNLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP-- 79 (316)
T ss_dssp SEEEEETTSCCCEEEE----CSCSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCSCC--
T ss_pred eEEEEECCCcceEehh----cCCCceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEeCCCCCc--
Confidence 4667787776655431 122334566665 5789988642 35789999876 222222 1 22222
Q ss_pred eeEEEE--ECCeEEEEcccCCCCCCceeEEeecCCCceEEcc--cCCccccceeEEEE--CCEEEEEcccCCCCccCceE
Q psy14726 436 YVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA--PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCE 509 (712)
Q Consensus 436 ~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 509 (712)
.++++ .+++||+.-.. .+.++++|+....-..+. .+..+ .+.++- ++.||+..... ...++
T Consensus 80 -~glavd~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~~----~~~I~ 146 (316)
T 1ijq_A 80 -DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT----PAKIK 146 (316)
T ss_dssp -CEEEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSS----SCEEE
T ss_pred -CEEEEeecCCeEEEEECC-----CCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccCC----CCeEE
Confidence 34444 47899997331 357899998765443332 22222 233332 68999875311 25789
Q ss_pred EeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCC-CCCccceEEEEECCE
Q psy14726 510 VYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDM-YNPRSNFAIEVIDDM 586 (712)
Q Consensus 510 ~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~~~~~ 586 (712)
++++....-+.+..-.. ..-.+++.- +++||+.-.. ...|+++|+....-..+... .....-.++++.++.
T Consensus 147 ~~~~dG~~~~~~~~~~~-~~P~gla~d~~~~~lY~~D~~-----~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ 220 (316)
T 1ijq_A 147 KGGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDK 220 (316)
T ss_dssp EEETTSCCEEEEECSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTE
T ss_pred EEcCCCCCeEEEEECCC-CCceEEEEeccCCEEEEEECC-----CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCE
Confidence 99886544333322111 122234443 6899998543 36899999875433333211 112233567777899
Q ss_pred EEEEcccCCCceeeeEEEEECCCCe
Q psy14726 587 IFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 587 i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
+|+.-.. ...|.++|+.+++
T Consensus 221 ly~~d~~-----~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 221 VFWTDII-----NEAIFSANRLTGS 240 (316)
T ss_dssp EEEEETT-----TTEEEEEETTTCC
T ss_pred EEEEECC-----CCeEEEEeCCCCc
Confidence 9998532 2368999987654
No 267
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.75 E-value=0.77 Score=48.45 Aligned_cols=146 Identities=12% Similarity=0.083 Sum_probs=77.8
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWT 519 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 519 (712)
++.+++.|+.+ ..|.+||..+..-..+-....-...-.++.+ ++.+++.||.++ +|-++|.+++...
T Consensus 131 ~~~~lasGs~d-----g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~-----~v~iwd~~~~~~~ 200 (435)
T 4e54_B 131 HPSTVAVGSKG-----GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG-----TTRLQDFKGNILR 200 (435)
T ss_dssp CTTCEEEEETT-----SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS-----CEEEEETTSCEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC-----EEEEeeccCCcee
Confidence 45677777754 3578888877654333222111111122232 566777777664 5788898887766
Q ss_pred EeCCCCCCCc-ceEE-EEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE---CCEEEEEcccC
Q psy14726 520 LIEPMRHRRS-GVSC-IAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI---DDMIFAIGGFN 594 (712)
Q Consensus 520 ~~~~~p~~r~-~~~~-~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~ 594 (712)
.+........ ..++ ..-++.+++.|+.+ ..+..||..... +..+.........+.+ ++.+++.||.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-----g~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDNV-----GNVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECSS-----SBEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeCC-----CcEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCc
Confidence 5543221111 1222 22367778888754 467888876543 2222211222223333 34577778766
Q ss_pred CCceeeeEEEEECCCCe
Q psy14726 595 GVTTIYHVECYDEKTDE 611 (712)
Q Consensus 595 ~~~~~~~v~~yd~~~~~ 611 (712)
+ .+.+||..+..
T Consensus 273 ~-----~v~iwd~~~~~ 284 (435)
T 4e54_B 273 Q-----TVKIWDLRQVR 284 (435)
T ss_dssp S-----BCCEEETTTCC
T ss_pred c-----eeeEEeccccc
Confidence 5 45677776543
No 268
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=91.60 E-value=11 Score=37.74 Aligned_cols=141 Identities=11% Similarity=0.134 Sum_probs=69.3
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 520 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 520 (712)
++.+.+.|+.+ ..+..||..+.+.... +..-.....++.+ +++.++.||.++ .+..||.....-..
T Consensus 87 ~~~~l~s~s~D-----~~v~lwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~l~s~~~d~-----~i~~wd~~~~~~~~ 154 (343)
T 2xzm_R 87 ENCFAISSSWD-----KTLRLWDLRTGTTYKR--FVGHQSEVYSVAFSPDNRQILSAGAER-----EIKLWNILGECKFS 154 (343)
T ss_dssp STTEEEEEETT-----SEEEEEETTSSCEEEE--EECCCSCEEEEEECSSTTEEEEEETTS-----CEEEEESSSCEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCcEEEE--EcCCCCcEEEEEECCCCCEEEEEcCCC-----EEEEEeccCCceee
Confidence 45666777654 4688899887754321 1111111122233 566677777653 57777776443222
Q ss_pred eCCCCCCCcceEEEEEC------------CEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCE
Q psy14726 521 IEPMRHRRSGVSCIAYH------------ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDM 586 (712)
Q Consensus 521 ~~~~p~~r~~~~~~~~~------------~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 586 (712)
............++.+. +.+++.|+.+ ..+..||.....-..+... ......+.+ +++
T Consensus 155 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~h---~~~v~~~~~s~~g~ 226 (343)
T 2xzm_R 155 SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD-----GRLKVWNTNFQIRYTFKAH---ESNVNHLSISPNGK 226 (343)
T ss_dssp CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT-----SEEEEEETTTEEEEEEECC---SSCEEEEEECTTSS
T ss_pred eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC-----CEEEEEcCCCceeEEEcCc---cccceEEEECCCCC
Confidence 22111111122222221 1456666654 4677788432211111111 111222223 677
Q ss_pred EEEEcccCCCceeeeEEEEECC
Q psy14726 587 IFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 587 i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
.++.||.++ .+.+||+.
T Consensus 227 ~l~sgs~dg-----~v~iwd~~ 243 (343)
T 2xzm_R 227 YIATGGKDK-----KLLIWDIL 243 (343)
T ss_dssp EEEEEETTC-----EEEEEESS
T ss_pred EEEEEcCCC-----eEEEEECC
Confidence 888888765 57788873
No 269
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=91.59 E-value=3.1 Score=45.89 Aligned_cols=119 Identities=12% Similarity=0.108 Sum_probs=70.3
Q ss_pred EEEECCeEEEEcccCCCCCCceeEEeec-CCC--ceEEcccCCc-----cc---cceeEEE--ECCE----EEEEcccCC
Q psy14726 439 TAVHHDVIYAMGGYNGQRRQNSVEKYNY-TEN--QWSLIAPMNV-----ER---SDASATT--LQGK----IYITGGFNG 501 (712)
Q Consensus 439 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~-~~~--~W~~~~~~p~-----~r---~~~~~~~--~~~~----iyv~GG~~~ 501 (712)
-++.++.||+.+.. ...++.+|. .+. .|+.-...+. .+ ...+.++ .+++ ||+...
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~--- 129 (599)
T 1w6s_A 58 PLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL--- 129 (599)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT---
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC---
Confidence 45679999998652 246899998 665 4886543321 11 1123444 5677 887542
Q ss_pred CCccCceEEeeCCCCe--eEEeCCCCCC--CcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCc--EEEc
Q psy14726 502 HNCLNSCEVYDPECNQ--WTLIEPMRHR--RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT--WSQV 568 (712)
Q Consensus 502 ~~~~~~v~~yd~~~~~--W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 568 (712)
-..+..+|..|++ |+.-..-+.. ....+-++.++.+|+.++.........+..||.++.+ |+.-
T Consensus 130 ---dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 130 ---DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp ---TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred ---CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 2468999988876 8764321100 1122234568888775432111124679999998764 8765
No 270
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=91.56 E-value=19 Score=39.59 Aligned_cols=189 Identities=8% Similarity=0.070 Sum_probs=99.8
Q ss_pred EEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeC
Q psy14726 350 LFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA 428 (712)
Q Consensus 350 i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 428 (712)
.++.|+.+ ..+..+|....+.... ... ....-.++++. ++.+++.||.+ ..+..+|..+++....-
T Consensus 162 ~l~s~s~D-----~~v~lwd~~~~~~~~~--l~~-H~~~V~~v~fspdg~~las~s~D-----~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 162 RIISGSDD-----NTVAIFEGPPFKFKST--FGE-HTKFVHSVRYNPDGSLFASTGGD-----GTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp EEEEEETT-----SCEEEEETTTBEEEEE--ECC-CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEC
T ss_pred EEEEEeCC-----CeEEEEECCCCeEeee--ecc-ccCceEEEEECCCCCEEEEEECC-----CcEEEEECCCCcEeeee
Confidence 45666643 3467778666554331 110 11122233333 67788888854 35888998877654321
Q ss_pred -CC-----CCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCcc-ccceeEEEECCEEEEEcccC
Q psy14726 429 -PM-----NFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVE-RSDASATTLQGKIYITGGFN 500 (712)
Q Consensus 429 -~~-----~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~ 500 (712)
.. .....-.+++. -+++.++.||.+ ..+..||..+.+....-..... ......+..++..++.++.+
T Consensus 229 ~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 303 (611)
T 1nr0_A 229 EDDSLKNVAHSGSVFGLTWSPDGTKIASASAD-----KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN 303 (611)
T ss_dssp BCTTSSSCSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETT
T ss_pred ccccccccccCCCEEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCC
Confidence 11 11111122333 267777877754 5688999988776433222211 11222334466666666655
Q ss_pred CCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEc
Q psy14726 501 GHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV 568 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 568 (712)
+ .+..+|+.+.+-... +.........+.+ +++.++.|+.+ ..+..||..+......
T Consensus 304 ~-----~i~~~~~~~~~~~~~--~~gh~~~v~~l~~spdg~~l~s~s~D-----~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 304 G-----FINFVNPELGSIDQV--RYGHNKAITALSSSADGKTLFSADAE-----GHINSWDISTGISNRV 361 (611)
T ss_dssp C-----CEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEC
T ss_pred C-----cEEEEeCCCCCcceE--EcCCCCCEEEEEEeCCCCEEEEEeCC-----CcEEEEECCCCceeee
Confidence 3 477788877653222 1111111222222 56667777754 4678899988766554
No 271
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=91.56 E-value=3.8 Score=40.53 Aligned_cols=195 Identities=9% Similarity=-0.007 Sum_probs=98.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++.||+.+.. ...+++||+ +++...+.... . ...+++. -+|++|+.... ...+.+||+. .+.+.+
T Consensus 56 g~~l~~~d~~-----~~~i~~~~~-~g~~~~~~~~~-~-~~~gl~~d~dG~l~v~~~~-----~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 56 QRTLVWSDLV-----GRRVLGWRE-DGTVDVLLDAT-A-FTNGNAVDAQQRLVHCEHG-----RRAITRSDAD-GQAHLL 121 (305)
T ss_dssp GTEEEEEETT-----TTEEEEEET-TSCEEEEEESC-S-CEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEE
T ss_pred CCEEEEEECC-----CCEEEEEeC-CCCEEEEeCCC-C-ccceeeECCCCCEEEEECC-----CCEEEEECCC-CCEEEE
Confidence 3457776542 246888988 45544432211 1 1223333 36788886321 1468899986 666655
Q ss_pred ccCCcc-c---cceeEEEECCEEEEE----cccCC--------CCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-C
Q psy14726 475 APMNVE-R---SDASATTLQGKIYIT----GGFNG--------HNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-H 537 (712)
Q Consensus 475 ~~~p~~-r---~~~~~~~~~~~iyv~----GG~~~--------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~ 537 (712)
...... + ....++.-+|++|+. |-... ......+++||+.+++++.+. .... -.+.+.. +
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~-p~gl~~spd 198 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH-PNGLAFSPD 198 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS-EEEEEECTT
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC-CcceEEcCC
Confidence 332111 1 111122227889986 43211 112357999999888887764 1111 1223333 3
Q ss_pred C-EEEEEcCCCCCCccceEEEEeCCCCcEEE---cCCCCCCccceEEEE-ECCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 538 E-CIYVIGGFNGMSRMCNGEKYNPVTKTWSQ---VPDMYNPRSNFAIEV-IDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 538 ~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~---~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
+ .||+............+++||...+.... ....+.. .-.+++. -++.||+..+ +.|.+||++...-
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~-~pdgi~~d~~G~lwv~~~-------~gv~~~~~~g~~~ 270 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDG-LPDGFCVDRGGWLWSSSG-------TGVCVFDSDGQLL 270 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSS-CCCSEEECTTSCEEECCS-------SEEEEECTTSCEE
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCC-CCCeEEECCCCCEEEecC-------CcEEEECCCCCEE
Confidence 4 58887542111112578999887654221 1111111 1112222 2667777642 2489999976655
Q ss_pred EEc
Q psy14726 613 YEA 615 (712)
Q Consensus 613 ~~~ 615 (712)
..+
T Consensus 271 ~~~ 273 (305)
T 3dr2_A 271 GHI 273 (305)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 272
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=91.56 E-value=8.2 Score=38.05 Aligned_cols=185 Identities=7% Similarity=-0.037 Sum_probs=94.0
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCC----Cccee
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF----KRCYV 437 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~----~r~~~ 437 (712)
..+..|++. +....+... .....+++.. ++++|+.... ...+.+||+. ++...+..... .+...
T Consensus 67 ~~i~~~~~~-g~~~~~~~~----~~~~~gl~~d~dG~l~v~~~~-----~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~ 135 (305)
T 3dr2_A 67 RRVLGWRED-GTVDVLLDA----TAFTNGNAVDAQQRLVHCEHG-----RRAITRSDAD-GQAHLLVGRYAGKRLNSPND 135 (305)
T ss_dssp TEEEEEETT-SCEEEEEES----CSCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECEETTEECSCCCC
T ss_pred CEEEEEeCC-CCEEEEeCC----CCccceeeECCCCCEEEEECC-----CCEEEEECCC-CCEEEEEeccCCCccCCCCC
Confidence 457788874 444432211 1122334433 6777766321 2468899986 66665532211 11122
Q ss_pred EEEEECCeEEEE----cccCC--------CCCCceeEEeecCCCceEEcccCCccccceeEEEE-CC-EEEEEcccCCCC
Q psy14726 438 STAVHHDVIYAM----GGYNG--------QRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL-QG-KIYITGGFNGHN 503 (712)
Q Consensus 438 ~~~~~~~~iyv~----GG~~~--------~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~ 503 (712)
.++.-+|.||+. |-... ......+++||+.+.+++.+. .... ..+.+.- ++ .||+........
T Consensus 136 i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~-p~gl~~spdg~~lyv~~~~~~~~ 212 (305)
T 3dr2_A 136 LIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH-PNGLAFSPDEQTLYVSQTPEQGH 212 (305)
T ss_dssp EEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS-EEEEEECTTSSEEEEEECCC---
T ss_pred EEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC-CcceEEcCCCCEEEEEecCCcCC
Confidence 333347889985 32110 112367999999988887664 1111 1122222 44 588875432111
Q ss_pred ccCceEEeeCCCCeeEEe---CCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEc
Q psy14726 504 CLNSCEVYDPECNQWTLI---EPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV 568 (712)
Q Consensus 504 ~~~~v~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 568 (712)
..+.+++||...+..... ...+......-++--++.||+..+ ..|.+||++......+
T Consensus 213 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~-------~gv~~~~~~g~~~~~~ 273 (305)
T 3dr2_A 213 GSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG-------TGVCVFDSDGQLLGHI 273 (305)
T ss_dssp CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS-------SEEEEECTTSCEEEEE
T ss_pred CCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC-------CcEEEECCCCCEEEEE
Confidence 135789998876543211 111111111112223577887653 3599999976655555
No 273
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=91.54 E-value=6.9 Score=41.02 Aligned_cols=114 Identities=9% Similarity=-0.067 Sum_probs=61.3
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecC----CCCccceEEEEECCC
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFD----GNEYYNSCRCFNAVT 421 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~----~~~~~~~v~~yd~~~ 421 (712)
..+|+.-....... +.+..+|+.+++-... . +..... ++++. +..+|+.--.. .+...+.+..+|+.+
T Consensus 85 ~~vyV~n~~~~~~~-~~VsVID~~t~~vv~~--I--~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 85 RRVYIQDPAHFAAI-TQQFVIDGSTGRILGM--T--DGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp TEEEEEECTTTCSS-EEEEEEETTTTEEEEE--E--EECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CEEEEECCCcCCCC-CeEEEEECCCCEEEEE--E--ECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 56777654221111 6899999998875531 1 112222 44444 56788774210 011235799999999
Q ss_pred CcEEEeCCCC-CCc-----ceeEEEE-E-CCeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 422 KVWKEIAPMN-FKR-----CYVSTAV-H-HDVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 422 ~~W~~~~~~~-~~r-----~~~~~~~-~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
++-..--+++ .+| .-+.+++ - +.++||..- ...+.+.++|+.+++=
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~----~~~~~VsVID~~t~kv 212 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQF----SPAPAVGVVDLEGKTF 212 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEEC----SSSCEEEEEETTTTEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEec----CCCCeEEEEECCCCeE
Confidence 8754321122 111 1223333 2 347888631 1236799999888763
No 274
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=91.45 E-value=3.8 Score=44.96 Aligned_cols=198 Identities=8% Similarity=-0.022 Sum_probs=103.5
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
+.+||.... .+.+..+|+.+++-... ++....-|.++.. +| .+|+.+. ...+..||+.+.+-+.+
T Consensus 167 ~~~~V~~~~-----~~~V~viD~~t~~v~~~--i~~g~~p~~v~~SpDGr~lyv~~~------dg~V~viD~~~~t~~~v 233 (567)
T 1qks_A 167 NLFSVTLRD-----AGQIALIDGSTYEIKTV--LDTGYAVHISRLSASGRYLFVIGR------DGKVNMIDLWMKEPTTV 233 (567)
T ss_dssp GEEEEEETT-----TTEEEEEETTTCCEEEE--EECSSCEEEEEECTTSCEEEEEET------TSEEEEEETTSSSCCEE
T ss_pred ceEEEEeCC-----CCeEEEEECCCCeEEEE--EeCCCCccceEECCCCCEEEEEcC------CCeEEEEECCCCCCcEe
Confidence 456666542 35799999998865422 2223333444443 34 6777542 24799999862232334
Q ss_pred ccCCccccceeEEEE-----CC-EEEEEcccCCCCccCceEEeeCCCCeeEEe-C--CC--------CCCCcceEEEEEC
Q psy14726 475 APMNVERSDASATTL-----QG-KIYITGGFNGHNCLNSCEVYDPECNQWTLI-E--PM--------RHRRSGVSCIAYH 537 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~--~~--------p~~r~~~~~~~~~ 537 (712)
..++.+..-..++.- +| .+|+..-. .+++.++|..+.+=... + .+ |.+|.....+..+
T Consensus 234 ~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~ 308 (567)
T 1qks_A 234 AEIKIGSEARSIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHY 308 (567)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSS
T ss_pred EEEecCCCCceeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCC
Confidence 444433322333333 45 56665432 25678889777653222 1 11 1233333222333
Q ss_pred CEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCE-EEEEcccCCCceeeeEEEEECCCCeEE--
Q psy14726 538 ECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDM-IFAIGGFNGVTTIYHVECYDEKTDEWY-- 613 (712)
Q Consensus 538 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~-- 613 (712)
+..+++-- .....++..|........+...+..+..|....- +++ +|+... ..+.+.++|.++++=.
T Consensus 309 ~~~~vv~~----~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~-----~sn~V~ViD~~t~kl~~~ 379 (567)
T 1qks_A 309 RPEFIVNV----KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN-----ARNKLVVIDTKEGKLVAI 379 (567)
T ss_dssp SSEEEEEE----TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG-----GGTEEEEEETTTTEEEEE
T ss_pred CCEEEEEe----cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeC-----CCCeEEEEECCCCcEEEE
Confidence 33333321 1136788888877665555555556666655443 444 444432 1347899999988643
Q ss_pred -Ec-cCCCCc
Q psy14726 614 -EA-TDMNIY 621 (712)
Q Consensus 614 -~~-~~~p~~ 621 (712)
.+ +.+|++
T Consensus 380 i~vgg~~Php 389 (567)
T 1qks_A 380 EDTGGQTPHP 389 (567)
T ss_dssp EECSSSSBCC
T ss_pred EeccCcCCCC
Confidence 23 445554
No 275
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=91.41 E-value=12 Score=38.21 Aligned_cols=178 Identities=11% Similarity=0.170 Sum_probs=90.0
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCC--cceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCCCcce
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPR--AYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFKRCY 436 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r--~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~r~~ 436 (712)
..+..+|..+++-...-....+... .-.+++.. ++.+++.|+.++ .+..||..... ...+..- ... -
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-----~v~~wd~~~~~~~~~~~~~h-~~~-v 252 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT-----TVRLWDLRITSRAVRTYHGH-EGD-I 252 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS-----CEEEEETTTTCCCCEEECCC-SSC-C
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC-----eEEEEECCCCCcceEEECCc-CCC-e
Confidence 3577888887765542222222111 11122221 567888888653 57888876321 1222111 111 1
Q ss_pred eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccc-----cceeEEEE--CCEEEEEcccCCCCccCce
Q psy14726 437 VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVER-----SDASATTL--QGKIYITGGFNGHNCLNSC 508 (712)
Q Consensus 437 ~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-----~~~~~~~~--~~~iyv~GG~~~~~~~~~v 508 (712)
.+++. .++..++.|+.+ ..+..||..+..-...-.....+ ....++.+ ++++++.|+.++ .+
T Consensus 253 ~~v~~~p~~~~l~s~s~D-----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg-----~i 322 (380)
T 3iz6_a 253 NSVKFFPDGQRFGTGSDD-----GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG-----DC 322 (380)
T ss_dssp CEEEECTTSSEEEEECSS-----SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS-----CE
T ss_pred EEEEEecCCCeEEEEcCC-----CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC-----CE
Confidence 12332 356777877754 45888998876543221111111 11122333 677777777653 58
Q ss_pred EEeeCCCCeeEE-eCCCCCC---CcceEEEEECCEEEEEcCCCCCCccceEEEEeCCC
Q psy14726 509 EVYDPECNQWTL-IEPMRHR---RSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVT 562 (712)
Q Consensus 509 ~~yd~~~~~W~~-~~~~p~~---r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 562 (712)
.+||..+.+-.. +..+... +....+..-++..++.||.+ ..+..||...
T Consensus 323 ~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D-----~~i~iW~~~~ 375 (380)
T 3iz6_a 323 YVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD-----KNLKIWAFSG 375 (380)
T ss_dssp EEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT-----SCEEEEECCS
T ss_pred EEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCC-----CCEEEEecCC
Confidence 889987765432 2222211 11222223367788888865 3556666553
No 276
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=91.33 E-value=1.5 Score=41.54 Aligned_cols=99 Identities=14% Similarity=0.148 Sum_probs=59.5
Q ss_pred ECCeEEEEcccCCCCCCceeEEeecCC----CceEEc--------ccCCcc--ccceeEEEE---CCEEEEEcccCCCCc
Q psy14726 442 HHDVIYAMGGYNGQRRQNSVEKYNYTE----NQWSLI--------APMNVE--RSDASATTL---QGKIYITGGFNGHNC 504 (712)
Q Consensus 442 ~~~~iyv~GG~~~~~~~~~v~~yd~~~----~~W~~~--------~~~p~~--r~~~~~~~~---~~~iyv~GG~~~~~~ 504 (712)
.+|++|+|=| +.+|+||..+ +....- +.+|.. ...--|+.. ++++|.+-|
T Consensus 69 ~~g~~~fFkg-------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG------ 135 (225)
T 3oyo_A 69 EASEAYVFSG-------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG------ 135 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET------
T ss_pred CCCeEEEEcC-------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC------
Confidence 5899999977 5788887532 222111 123321 012223332 689999987
Q ss_pred cCceEEeeCCCCeeEEe----C-CCCC------CCcceEEEE--ECCEEEEEcCCCCCCccceEEEEeCC
Q psy14726 505 LNSCEVYDPECNQWTLI----E-PMRH------RRSGVSCIA--YHECIYVIGGFNGMSRMCNGEKYNPV 561 (712)
Q Consensus 505 ~~~v~~yd~~~~~W~~~----~-~~p~------~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~ 561 (712)
+..|+||..+++...- . ..|. +..--++.. .++++|++-| +..|+||..
T Consensus 136 -~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~ywr~d~~ 197 (225)
T 3oyo_A 136 -NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYVRIDFT 197 (225)
T ss_dssp -TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEECC
T ss_pred -CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCC
Confidence 5689999777665431 1 1221 222334444 3789999987 578999987
No 277
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=91.13 E-value=11 Score=36.14 Aligned_cols=178 Identities=9% Similarity=0.017 Sum_probs=99.4
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA 440 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~ 440 (712)
..|..+++....-..+..... ..-+++++. ++.||+.-.. ...+.++|+....-..+......+ -..++
T Consensus 58 ~~I~~~~~~g~~~~~~~~~~~---~~p~~ia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~~~~-P~~i~ 128 (267)
T 1npe_A 58 PSIGRASLHGGEPTTIIRQDL---GSPEGIALDHLGRTIFWTDSQ-----LDRIEVAKMDGTQRRVLFDTGLVN-PRGIV 128 (267)
T ss_dssp TEEEEEESSSCCCEEEECTTC---CCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCSS-EEEEE
T ss_pred CEEEEEecCCCCcEEEEECCC---CCccEEEEEecCCeEEEEECC-----CCEEEEEEcCCCCEEEEEECCCCC-ccEEE
Confidence 468888887654332211111 233556665 5789988542 357889998765433332211112 23444
Q ss_pred EE--CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCC
Q psy14726 441 VH--HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECN 516 (712)
Q Consensus 441 ~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 516 (712)
+- +++||+..... ....++++++....-..+..... ..-.+++.- +++||+.-.. .+.+.+||+...
T Consensus 129 vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~~-----~~~I~~~~~~g~ 199 (267)
T 1npe_A 129 TDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLCWVDAG-----THRAECLNPAQP 199 (267)
T ss_dssp EETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTEE
T ss_pred EeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEEEEECC-----CCEEEEEecCCC
Confidence 43 68999975321 13578888876554333322111 111233332 5789997642 357999998764
Q ss_pred eeEEe-CCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEE
Q psy14726 517 QWTLI-EPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 517 ~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
.-..+ ..+..| .+++..++.||+.... ...|.++|+.+.+-.
T Consensus 200 ~~~~~~~~~~~P---~gi~~d~~~lyva~~~-----~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 200 GRRKVLEGLQYP---FAVTSYGKNLYYTDWK-----TNSVIAMDLAISKEM 242 (267)
T ss_dssp EEEEEEECCCSE---EEEEEETTEEEEEETT-----TTEEEEEETTTTEEE
T ss_pred ceEEEecCCCCc---eEEEEeCCEEEEEECC-----CCeEEEEeCCCCCce
Confidence 43222 222222 3555668999997543 367999999877544
No 278
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=90.95 E-value=2.4 Score=39.16 Aligned_cols=144 Identities=14% Similarity=0.070 Sum_probs=78.8
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCC---CcEEEe----CCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEE
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVT---KVWKEI----APMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEK 463 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~---~~W~~~----~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~ 463 (712)
+++.+++.+|+|-| +.+|+++... +-=..+ +.+|. .-..+....++++|+|-| +.+|+
T Consensus 10 A~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~w~glP~-~iDAa~~~~~g~~yfFkg-------~~yw~ 74 (196)
T 3c7x_A 10 TVAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQFWRGLPA-SINTAYERKDGKFVFFKG-------DKHWV 74 (196)
T ss_dssp EEEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHHSTTCCS-SCCEEEECTTSCEEEEET-------TEEEE
T ss_pred EEEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHhccCCCC-CccEEEEeCCCcEEEecC-------CEEEE
Confidence 34456899999987 4577775431 100111 23343 222222224789999977 57888
Q ss_pred eecCCCce---EEccc----CCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeE-----EeCCC-CCCC
Q psy14726 464 YNYTENQW---SLIAP----MNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT-----LIEPM-RHRR 528 (712)
Q Consensus 464 yd~~~~~W---~~~~~----~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~~~~-p~~r 528 (712)
|+..+... ..+.. +|..+.. +|... ++++|.+-| +..++||..+++-. .+... ..+.
T Consensus 75 ~~~~~~~~gyPk~I~~~~~glP~~~ID-AA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~~gip~ 146 (196)
T 3c7x_A 75 FDEASLEPGYPKHIKELGRGLPTDKID-AALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVWEGIPE 146 (196)
T ss_dssp EETTEECTTCSEEGGGTCBSCCSSCCS-EEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGSBTCCS
T ss_pred EeCCcccCCCCeEhhhcCCCCCCCccc-EEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHCCCcCC
Confidence 87543211 12222 3322222 22222 689999977 46889998775421 11111 1122
Q ss_pred cceEEEEE-CC-EEEEEcCCCCCCccceEEEEeCCCCc
Q psy14726 529 SGVSCIAY-HE-CIYVIGGFNGMSRMCNGEKYNPVTKT 564 (712)
Q Consensus 529 ~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~ 564 (712)
.--++... ++ ++|++-| +..++||..+.+
T Consensus 147 ~idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 147 SPRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp SCSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred CcceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 22334434 44 8999977 578999987764
No 279
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=90.94 E-value=15 Score=37.29 Aligned_cols=153 Identities=7% Similarity=-0.034 Sum_probs=80.6
Q ss_pred ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeE
Q psy14726 442 HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT 519 (712)
Q Consensus 442 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 519 (712)
.+|++.++++.. ....+.+||+.+.+....... ... -..+.+ ++++++.|+. +.+.+++..++...
T Consensus 143 pDg~~la~as~~---~d~~i~iwd~~~~~~~~~~~~--~~~-V~~v~fspdg~~l~s~s~------~~~~~~~~~~~~~~ 210 (365)
T 4h5i_A 143 REGTVAAIASSK---VPAIMRIIDPSDLTEKFEIET--RGE-VKDLHFSTDGKVVAYITG------SSLEVISTVTGSCI 210 (365)
T ss_dssp TTSSCEEEEESC---SSCEEEEEETTTTEEEEEEEC--SSC-CCEEEECTTSSEEEEECS------SCEEEEETTTCCEE
T ss_pred CCCCEEEEEECC---CCCEEEEeECCCCcEEEEeCC--CCc-eEEEEEccCCceEEeccc------eeEEEEEeccCcce
Confidence 356655443211 125688999988765433221 111 122233 6777776652 34667777776654
Q ss_pred EeCCCCCCCcceE--EEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC--CCCCCccceEEEEE--CCEEEEEccc
Q psy14726 520 LIEPMRHRRSGVS--CIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP--DMYNPRSNFAIEVI--DDMIFAIGGF 593 (712)
Q Consensus 520 ~~~~~p~~r~~~~--~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~i~v~GG~ 593 (712)
............. +..-++..++.++.++.. ...++.+|.....+.... .+........++.+ ++++++.|+.
T Consensus 211 ~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 211 ARKTDFDKNWSLSKINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp EEECCCCTTEEEEEEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET
T ss_pred eeeecCCCCCCEEEEEEcCCCCEEEEEecCCcc-eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC
Confidence 3332222222222 233478888877654322 235667776666554331 11111112223333 7888899987
Q ss_pred CCCceeeeEEEEECCCCeE
Q psy14726 594 NGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 594 ~~~~~~~~v~~yd~~~~~W 612 (712)
++ .|.+||..+.+-
T Consensus 290 D~-----~V~iwd~~~~~~ 303 (365)
T 4h5i_A 290 DN-----SIALVKLKDLSM 303 (365)
T ss_dssp TS-----CEEEEETTTTEE
T ss_pred CC-----EEEEEECCCCcE
Confidence 65 578899887653
No 280
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=90.86 E-value=4.9 Score=40.01 Aligned_cols=143 Identities=9% Similarity=0.099 Sum_probs=75.1
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 520 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 520 (712)
++..++.|+.+ ..+.+||..+++-.. .+........++.+ ++.+++.|+.++ .+..||.....-..
T Consensus 76 dg~~l~s~s~D-----~~v~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D~-----~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 76 DGAYALSASWD-----KTLRLWDVATGETYQ--RFVGHKSDVMSVDIDKKASMIISGSRDK-----TIKVWTIKGQCLAT 143 (319)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSCEEEEEETTS-----CEEEEETTSCEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCeeE--EEccCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCeEEE
Confidence 56777777754 568899988875321 11111111122223 567778887664 47777876554333
Q ss_pred eCCCCCCCcceEEEEE-------CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEc
Q psy14726 521 IEPMRHRRSGVSCIAY-------HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIG 591 (712)
Q Consensus 521 ~~~~p~~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~G 591 (712)
+..... .-..+... ++..++.||.+ ..+..||..+.+-... +.........+.+ ++++++.|
T Consensus 144 ~~~h~~--~v~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 144 LLGHND--WVSQVRVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASA 214 (319)
T ss_dssp ECCCSS--CEEEEEECCC------CCEEEEEETT-----SCEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEE
T ss_pred EeccCC--cEEEEEEccCCCCCCCccEEEEEeCC-----CEEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEE
Confidence 321111 11111111 23356666654 4678888876543321 1111111222223 67788888
Q ss_pred ccCCCceeeeEEEEECCCCe
Q psy14726 592 GFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 592 G~~~~~~~~~v~~yd~~~~~ 611 (712)
|.++ .+.+||..+.+
T Consensus 215 ~~dg-----~i~iwd~~~~~ 229 (319)
T 3frx_A 215 GKDG-----EIMLWNLAAKK 229 (319)
T ss_dssp ETTC-----EEEEEETTTTE
T ss_pred eCCC-----eEEEEECCCCc
Confidence 8765 67888887764
No 281
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=90.73 E-value=16 Score=37.15 Aligned_cols=189 Identities=8% Similarity=-0.065 Sum_probs=98.2
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++++.++++.. ....+..+|+.+.+......-. ..-.+++. -+|++++.|+. +.+.+++..+......
T Consensus 144 Dg~~la~as~~---~d~~i~iwd~~~~~~~~~~~~~--~~V~~v~fspdg~~l~s~s~------~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 144 EGTVAAIASSK---VPAIMRIIDPSDLTEKFEIETR--GEVKDLHFSTDGKVVAYITG------SSLEVISTVTGSCIAR 212 (365)
T ss_dssp TSSCEEEEESC---SSCEEEEEETTTTEEEEEEECS--SCCCEEEECTTSSEEEEECS------SCEEEEETTTCCEEEE
T ss_pred CCCEEEEEECC---CCCEEEEeECCCCcEEEEeCCC--CceEEEEEccCCceEEeccc------eeEEEEEeccCcceee
Confidence 55555443311 1246888999988764432211 11123333 35677666652 3467777777665433
Q ss_pred ccCCccccceeE--EEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC--CCCCCCcceEEEEE--CCEEEEEcCCCC
Q psy14726 475 APMNVERSDASA--TTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNG 548 (712)
Q Consensus 475 ~~~p~~r~~~~~--~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~ 548 (712)
............ ..-+++.++.++.++.. ...+..+|.....+.... .+........++.+ ++++++.|+.+
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D- 290 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND- 290 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT-
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcc-eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC-
Confidence 222111111222 23378888888765421 234666676666554332 11111112222223 67888888865
Q ss_pred CCccceEEEEeCCCCcEEEcCCCCCC-ccceEEEEE--CCEEEEEcccCCCceeeeEEEEECC
Q psy14726 549 MSRMCNGEKYNPVTKTWSQVPDMYNP-RSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 549 ~~~~~~v~~yd~~~~~W~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
..|..||..+.+-.. ..... ...-..+.+ ++++++.|+.++ .|-+||+.
T Consensus 291 ----~~V~iwd~~~~~~~~--~~~~gH~~~V~~v~fSpdg~~laS~S~D~-----tvrvw~ip 342 (365)
T 4h5i_A 291 ----NSIALVKLKDLSMSK--IFKQAHSFAITEVTISPDSTYVASVSAAN-----TIHIIKLP 342 (365)
T ss_dssp ----SCEEEEETTTTEEEE--EETTSSSSCEEEEEECTTSCEEEEEETTS-----EEEEEECC
T ss_pred ----CEEEEEECCCCcEEE--EecCcccCCEEEEEECCCCCEEEEEeCCC-----eEEEEEcC
Confidence 468899988765322 11111 111223333 788888888765 57777764
No 282
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=89.94 E-value=20 Score=37.16 Aligned_cols=192 Identities=12% Similarity=0.114 Sum_probs=102.7
Q ss_pred CceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCc-
Q psy14726 347 HEILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKV- 423 (712)
Q Consensus 347 ~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~- 423 (712)
.+.||+... ....|..+|+.++.-..+... . ...+ +++. ++.+|+...... ..++.+|+.++.
T Consensus 141 ~g~lyv~d~-----~~~~I~~id~~~g~~~~~~~~-~---~~~~-ia~~~~g~~l~~~d~~~~----~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 141 NNTVLAYQR-----DDPRVRLISVDDNKVTTVHPG-F---KGGK-PAVTKDKQRVYSIGWEGT----HTVYVYMKASGWA 206 (409)
T ss_dssp TTEEEEEET-----TTTEEEEEETTTTEEEEEEET-C---CBCB-CEECTTSSEEEEEBSSTT----CEEEEEEGGGTTC
T ss_pred CCCEEEEec-----CCCcEEEEECCCCEEEEeecc-C---CCCc-eeEecCCCcEEEEecCCC----ceEEEEEcCCCce
Confidence 345666543 224688899887766554222 1 1122 3333 456666643211 278999987654
Q ss_pred EEEeCCCC--CCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCceEEccc---CCccccc-e-eEEEE--CCE
Q psy14726 424 WKEIAPMN--FKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP---MNVERSD-A-SATTL--QGK 492 (712)
Q Consensus 424 W~~~~~~~--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~r~~-~-~~~~~--~~~ 492 (712)
...+.... ....-+++++. ++.||+..+ ...+++||+.+.....+.. ....... . .++.- ++.
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ 280 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSN 280 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCE
Confidence 23331111 11222334443 689999432 2479999999887655521 1112222 1 44444 589
Q ss_pred EEEEcccCCCCccCceEEeeCCCCeeEEeCCC-CC---------C-Ccce-EEEEE-CCEEEEEcC-CCCCCccceEEEE
Q psy14726 493 IYITGGFNGHNCLNSCEVYDPECNQWTLIEPM-RH---------R-RSGV-SCIAY-HECIYVIGG-FNGMSRMCNGEKY 558 (712)
Q Consensus 493 iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~---------~-r~~~-~~~~~-~~~iyv~GG-~~~~~~~~~v~~y 558 (712)
||+.... .+.+.+||+....-...... .. . .... +++.. ++.||+.-. . ...|.++
T Consensus 281 lyv~d~~-----~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~-----~~~I~~~ 350 (409)
T 3hrp_A 281 FYMSDQN-----LSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK-----GYCLRKL 350 (409)
T ss_dssp EEEEETT-----TTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT-----TCEEEEE
T ss_pred EEEEeCC-----CCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC-----CCEEEEE
Confidence 9998542 35799998876533322221 00 0 1112 23332 567999854 3 3678999
Q ss_pred eCCCCcEEEc
Q psy14726 559 NPVTKTWSQV 568 (712)
Q Consensus 559 d~~~~~W~~~ 568 (712)
|+.+.....+
T Consensus 351 ~~~~G~v~~~ 360 (409)
T 3hrp_A 351 DILDGYVSTV 360 (409)
T ss_dssp ETTTTEEEEE
T ss_pred ECCCCEEEEE
Confidence 9766766555
No 283
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=89.83 E-value=3.8 Score=43.30 Aligned_cols=146 Identities=14% Similarity=0.059 Sum_probs=80.7
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCCCcEEE--e----CCCCCCcceeEEEE--ECCeEEEEcccCCCCCCceeE
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKE--I----APMNFKRCYVSTAV--HHDVIYAMGGYNGQRRQNSVE 462 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~--~----~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~ 462 (712)
+++.+++.+|+|-| +.+|+++.....+.. + +.+|.. .. ++.. .++++|+|=| +.+|
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~-iD-Aa~~~~~~g~~~fFKg-------~~~W 330 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPNG-LE-AAYEFADRDEVRFFKG-------NKYW 330 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCSS-CC-EEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccCCCCC-ee-EEEEEcCCCeEEEEeC-------CEEE
Confidence 45567999999987 346666654433321 1 123321 11 2222 3689999977 5678
Q ss_pred EeecCCCc--e-EEcc---cCCccccce-eEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeE-----EeC-CCC-C
Q psy14726 463 KYNYTENQ--W-SLIA---PMNVERSDA-SATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT-----LIE-PMR-H 526 (712)
Q Consensus 463 ~yd~~~~~--W-~~~~---~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~~-~~p-~ 526 (712)
+|+..+-. + ..+. .+|..-..- +|... ++++|+|-| +..|+||..+++-. .+. ..| .
T Consensus 331 ~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~fpgi 403 (450)
T 1su3_A 331 AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDFPGI 403 (450)
T ss_dssp EEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHSTTS
T ss_pred EecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhcCCCC
Confidence 88743210 1 1111 122211122 22233 689999987 56899987654321 111 011 1
Q ss_pred CCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEE
Q psy14726 527 RRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 527 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
+..--+++..++++|+|-| +..|+||..+.+=.
T Consensus 404 p~~iDAA~~~~g~~YFFkg-------~~ywr~d~~~~~v~ 436 (450)
T 1su3_A 404 GHKVDAVFMKDGFFYFFHG-------TRQYKFDPKTKRIL 436 (450)
T ss_dssp CSCCSEEEEETTEEEEEET-------TEEEEEETTTTEEE
T ss_pred CCCccEEEEcCCeEEEEeC-------CEEEEEECCcceEe
Confidence 2223345557899999987 57899998776544
No 284
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=89.73 E-value=6.8 Score=42.85 Aligned_cols=190 Identities=9% Similarity=0.031 Sum_probs=98.4
Q ss_pred CEEEEEeecCCCCccceEEEEEC--CCCcEEEeCCCCCCcceeEEEEECC-eEEEEcccCCCCCCceeEEeecCCCceEE
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNA--VTKVWKEIAPMNFKRCYVSTAVHHD-VIYAMGGYNGQRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~--~~~~W~~~~~~~~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 473 (712)
+++.+.+...++.....+|..+. .... ..+...+..+ ......++ .++++.+.. ..+..||..+.+...
T Consensus 75 d~~l~~~~~~~g~~~~~l~~~~~~~~g~~-~~l~~~~~~~--~~~~s~dg~~~~~~s~~~-----~~~~l~d~~~g~~~~ 146 (582)
T 3o4h_A 75 GRVILVRDVSKGAEQHALFKVNTSRPGEE-QRLEAVKPMR--ILSGVDTGEAVVFTGATE-----DRVALYALDGGGLRE 146 (582)
T ss_dssp SEEEEEEECSTTSCCEEEEEEETTSTTCC-EECTTSCSBE--EEEEEECSSCEEEEEECS-----SCEEEEEEETTEEEE
T ss_pred CeEEEEeccCCCCcceEEEEEeccCCCcc-ccccCCCCce--eeeeCCCCCeEEEEecCC-----CCceEEEccCCcEEE
Confidence 35555544322233446788887 4333 2444333322 33344444 455554432 234478988887776
Q ss_pred cccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccc
Q psy14726 474 IAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMC 553 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 553 (712)
+...+. ...+..-+|+..++++.+... ..+++.+|..+++++.+..-+.. ....+..-+|+.++.+..++ ..
T Consensus 147 l~~~~~---~~~~~spDG~~la~~~~~~~~-~~~i~~~d~~~g~~~~l~~~~~~-~~~~~~SpDG~~l~~~~~~~---~~ 218 (582)
T 3o4h_A 147 LARLPG---FGFVSDIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFDSGEGS-FSSASISPGMKVTAGLETAR---EA 218 (582)
T ss_dssp EEEESS---CEEEEEEETTEEEEEEEEETT-EEEEEEEETTTCCCEEECCSSCE-EEEEEECTTSCEEEEEECSS---CE
T ss_pred eecCCC---ceEEECCCCCEEEEEEEcCCC-CeEEEEEcCCCCCceEeecCCCc-cccceECCCCCEEEEccCCC---ee
Confidence 654333 223333467666655543221 24599999999998877533221 11122222555444433221 35
Q ss_pred eEEEEeCCCCcEEEcCCCCCCccceE-----E--EEECCEEEEEcccCCCceeeeEEEEEC
Q psy14726 554 NGEKYNPVTKTWSQVPDMYNPRSNFA-----I--EVIDDMIFAIGGFNGVTTIYHVECYDE 607 (712)
Q Consensus 554 ~v~~yd~~~~~W~~~~~~p~~r~~~~-----~--~~~~~~i~v~GG~~~~~~~~~v~~yd~ 607 (712)
.++.+|..+++...+......-.... . ..-++++++.+..++ .+.+|+.
T Consensus 219 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g-----~~~l~~~ 274 (582)
T 3o4h_A 219 RLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG-----RSAVFID 274 (582)
T ss_dssp EEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT-----EEEEEET
T ss_pred EEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC-----cEEEEEE
Confidence 79999999988874332211111110 0 122667777776554 4566776
No 285
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=89.55 E-value=20 Score=37.00 Aligned_cols=148 Identities=7% Similarity=-0.030 Sum_probs=78.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCC-CCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMN-FKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 473 (712)
++.+++.|+.+ ..+..||..+.+-...-..+ ....-.+++. -++..++.|+.+ ..+..||..+.+...
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-----GIIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-----CeEEEEEcCCccEEE
Confidence 46777787754 46899999887643221111 1112222222 256777877754 458899988765432
Q ss_pred cccCCccccceeEEEE------CCEEEEEcccCCCCccCceEEeeCCCCeeEEe-C-C---C------C-----------
Q psy14726 474 IAPMNVERSDASATTL------QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI-E-P---M------R----------- 525 (712)
Q Consensus 474 ~~~~p~~r~~~~~~~~------~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~-~---~------p----------- 525 (712)
.-..+.. .....+.+ ++.+++.|+.+ ..+..||..+.+-... . . . |
T Consensus 251 ~~~~~~~-~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 324 (437)
T 3gre_A 251 SWSFGDH-APITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFC 324 (437)
T ss_dssp EEBCTTC-EEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCC
T ss_pred EEecCCC-CceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceec
Confidence 2111111 11111111 35566666655 3588888877653221 1 0 0 0
Q ss_pred ---CCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCc
Q psy14726 526 ---HRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKT 564 (712)
Q Consensus 526 ---~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 564 (712)
....-.+++..++.+++.||.+ ..+..||..+.+
T Consensus 325 ~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~~wd~~~~~ 361 (437)
T 3gre_A 325 GIRSLNALSTISVSNDKILLTDEAT-----SSIVMFSLNELS 361 (437)
T ss_dssp CCCSGGGGCCEEEETTEEEEEEGGG-----TEEEEEETTCGG
T ss_pred ccccCCceEEEEECCceEEEecCCC-----CeEEEEECCCcc
Confidence 0011223344478888888864 467888887654
No 286
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=89.55 E-value=21 Score=36.73 Aligned_cols=214 Identities=13% Similarity=0.008 Sum_probs=118.9
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
.|..+++.......+.. ......++++. ++.||+.--. ...++++++.......+....... -.++++
T Consensus 97 ~I~~i~~~~~~~~~~~~----~~~~~~gl~~d~~~~~ly~~D~~-----~~~I~r~~~~g~~~~~~~~~~~~~-p~glav 166 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLN----NLENAIALDFHHRRELVFWSDVT-----LDRILRANLNGSNVEEVVSTGLES-PGGLAV 166 (386)
T ss_dssp CEEEECTTSCCCEEEEC----SCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCCEEEEECSSCSC-CCCEEE
T ss_pred cceeeccCCCcEEEEec----CCCccEEEEEecCCCeEEEEeCC-----CCcEEEEecCCCCcEEEEeCCCCC-ccEEEE
Confidence 56777777666554321 12234555555 6789987432 357999999887766553222111 123333
Q ss_pred --ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeE-EEE--CCEEEEEcccCCCCccCceEEeeCCCC
Q psy14726 442 --HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASA-TTL--QGKIYITGGFNGHNCLNSCEVYDPECN 516 (712)
Q Consensus 442 --~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~-~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 516 (712)
.++.||+.-.. .+.++++++....-..+..- ....... ++- ++.||+.--.. ...++++++...
T Consensus 167 d~~~g~lY~~d~~-----~~~I~~~~~dg~~~~~l~~~--~l~~P~giavdp~~g~ly~td~~~----~~~I~r~~~dG~ 235 (386)
T 3v65_B 167 DWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQ--SLEKPRAIALHPMEGTIYWTDWGN----TPRIEASSMDGS 235 (386)
T ss_dssp ETTTTEEEEEETT-----TTEEEECBTTSCSCEEEECS--SCSCEEEEEEETTTTEEEEEECSS----SCEEEEEETTSC
T ss_pred EeCCCeEEEEcCC-----CCeEEEEeCCCCceEEeecC--CCCCCcEEEEEcCCCeEEEeccCC----CCEEEEEeCCCC
Confidence 47899997432 25788888876543333221 1112223 332 68899874211 357999998765
Q ss_pred eeEEeCCCCCCCcceEEEE--ECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccC
Q psy14726 517 QWTLIEPMRHRRSGVSCIA--YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFN 594 (712)
Q Consensus 517 ~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~ 594 (712)
.-+.+..-.. ..-.++++ .+++||+.-.. ...|+++|+....-..+.... ...-.++++.++.||+.--.+
T Consensus 236 ~~~~~~~~~~-~~PnGlavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~~~ 308 (386)
T 3v65_B 236 GRRIIADTHL-FWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDWHT 308 (386)
T ss_dssp SCEEEECSSC-SCEEEEEEEGGGTEEEEEETT-----TTEEEEECTTSCSCEEEECSS-CSSEEEEEEETTEEEEEETTT
T ss_pred CcEEEEECCC-CCeeeEEEeCCCCEEEEEECC-----CCEEEEEeCCCCeeEEEEECC-CCCceEEEEECCEEEEeeCCC
Confidence 4333321111 11123333 36899998532 368999998643322221111 122356677899999985322
Q ss_pred CCceeeeEEEEECCCC
Q psy14726 595 GVTTIYHVECYDEKTD 610 (712)
Q Consensus 595 ~~~~~~~v~~yd~~~~ 610 (712)
..|..+|..++
T Consensus 309 -----~~V~~~~~~~G 319 (386)
T 3v65_B 309 -----KSINSANKFTG 319 (386)
T ss_dssp -----TEEEEEETTTC
T ss_pred -----CeEEEEECCCC
Confidence 36888885554
No 287
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=89.54 E-value=27 Score=38.30 Aligned_cols=188 Identities=14% Similarity=0.118 Sum_probs=99.9
Q ss_pred EEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcce-eEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcc-
Q psy14726 399 IYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCY-VSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA- 475 (712)
Q Consensus 399 lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~- 475 (712)
.++.||.+ ..+..||..+.+... .+...... .+++. -++++++.||.+ ..+..||..+.+....-
T Consensus 162 ~l~s~s~D-----~~v~lwd~~~~~~~~--~l~~H~~~V~~v~fspdg~~las~s~D-----~~i~lwd~~~g~~~~~~~ 229 (611)
T 1nr0_A 162 RIISGSDD-----NTVAIFEGPPFKFKS--TFGEHTKFVHSVRYNPDGSLFASTGGD-----GTIVLYNGVDGTKTGVFE 229 (611)
T ss_dssp EEEEEETT-----SCEEEEETTTBEEEE--EECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEECB
T ss_pred EEEEEeCC-----CeEEEEECCCCeEee--eeccccCceEEEEECCCCCEEEEEECC-----CcEEEEECCCCcEeeeec
Confidence 56666654 347788876654432 12211111 22322 367888888754 45888888776643221
Q ss_pred cCCccccce----eEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCC-cceEEEEECCEEEEEcCCCC
Q psy14726 476 PMNVERSDA----SATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRR-SGVSCIAYHECIYVIGGFNG 548 (712)
Q Consensus 476 ~~p~~r~~~----~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~ 548 (712)
.......+| ..+.+ +++.++.||.+ .++..+|..+.+....-...... .....+..++..++.++.+
T Consensus 230 ~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d- 303 (611)
T 1nr0_A 230 DDSLKNVAHSGSVFGLTWSPDGTKIASASAD-----KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN- 303 (611)
T ss_dssp CTTSSSCSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETT-
T ss_pred cccccccccCCCEEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCC-
Confidence 100000112 12223 67777888766 46888999888765432222111 1122333466666666654
Q ss_pred CCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 549 MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 549 ~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
..+..||+.+.+-.... .........+.+ +++.++.|+.++ .+.+||..++.....
T Consensus 304 ----~~i~~~~~~~~~~~~~~--~gh~~~v~~l~~spdg~~l~s~s~D~-----~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 304 ----GFINFVNPELGSIDQVR--YGHNKAITALSSSADGKTLFSADAEG-----HINSWDISTGISNRV 361 (611)
T ss_dssp ----CCEEEEETTTTEEEEEE--CCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEC
T ss_pred ----CcEEEEeCCCCCcceEE--cCCCCCEEEEEEeCCCCEEEEEeCCC-----cEEEEECCCCceeee
Confidence 45678888766532221 111111222223 677788888765 578889888765443
No 288
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=89.49 E-value=11 Score=39.21 Aligned_cols=149 Identities=11% Similarity=0.019 Sum_probs=82.1
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL 520 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 520 (712)
++.+++.|+.+ ..+..||..+.+-...-..+.......++.+ +++.++.|+.++ .+..||..+.+...
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG-----IIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS-----CEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC-----eEEEEEcCCccEEE
Confidence 46777777754 4689999988664322111111122233333 677888887664 58899988866533
Q ss_pred eCCCCCCCcceEEEEE-----CCEEEEEcCCCCCCccceEEEEeCCCCcEEEc-C-C---C------C------------
Q psy14726 521 IEPMRHRRSGVSCIAY-----HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-P-D---M------Y------------ 572 (712)
Q Consensus 521 ~~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~-~---~------p------------ 572 (712)
.-..+....-.+++.. ++.+++.|+.+ ..+..||..+.+-... . . . |
T Consensus 251 ~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (437)
T 3gre_A 251 SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCG 325 (437)
T ss_dssp EEBCTTCEEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCC
T ss_pred EEecCCCCceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecc
Confidence 2222221111112111 34566666643 4688888876652221 0 0 0 0
Q ss_pred --CCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 573 --NPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 573 --~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
....-.+++..++.+++.||.++ .+.+||..+.+
T Consensus 326 ~~~~~~v~~l~~~~~~~l~s~~~d~-----~i~~wd~~~~~ 361 (437)
T 3gre_A 326 IRSLNALSTISVSNDKILLTDEATS-----SIVMFSLNELS 361 (437)
T ss_dssp CCSGGGGCCEEEETTEEEEEEGGGT-----EEEEEETTCGG
T ss_pred cccCCceEEEEECCceEEEecCCCC-----eEEEEECCCcc
Confidence 00112234444888899998766 68889988765
No 289
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=89.47 E-value=4.5 Score=42.74 Aligned_cols=144 Identities=11% Similarity=0.078 Sum_probs=80.5
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCCceEE--c----ccCCccccceeEEEE--CCEEEEEcccCCCCccCceE
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSL--I----APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCE 509 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~--~----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 509 (712)
+++..+|.+|+|-| ..+|+++.....+.. + +.+|.. .. ++... ++++|+|=| +.+|
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~-iD-Aa~~~~~~g~~~fFKg-------~~~W 330 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPNG-LE-AAYEFADRDEVRFFKG-------NKYW 330 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCSS-CC-EEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccCCCCC-ee-EEEEEcCCCeEEEEeC-------CEEE
Confidence 55678999999977 456777655443321 1 123321 11 22222 689999977 4577
Q ss_pred EeeCCCCe--e-EEeC---CCCC--CCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEE-----c----CCC
Q psy14726 510 VYDPECNQ--W-TLIE---PMRH--RRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-----V----PDM 571 (712)
Q Consensus 510 ~yd~~~~~--W-~~~~---~~p~--~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~ 571 (712)
+|+..+-. + ..+. .+|. ..-.++.... ++++|+|-| +..|+||..+.+-.. + +.+
T Consensus 331 ~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~fpgi 403 (450)
T 1su3_A 331 AVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDFPGI 403 (450)
T ss_dssp EEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHSTTS
T ss_pred EecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhcCCCC
Confidence 77643210 0 1111 1232 1222222222 589999987 678999987543221 1 122
Q ss_pred CCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeEE
Q psy14726 572 YNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEWY 613 (712)
Q Consensus 572 p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 613 (712)
| ..--++...++++|+|-|. ..|.||..+.+=.
T Consensus 404 p--~~iDAA~~~~g~~YFFkg~-------~ywr~d~~~~~v~ 436 (450)
T 1su3_A 404 G--HKVDAVFMKDGFFYFFHGT-------RQYKFDPKTKRIL 436 (450)
T ss_dssp C--SCCSEEEEETTEEEEEETT-------EEEEEETTTTEEE
T ss_pred C--CCccEEEEcCCeEEEEeCC-------EEEEEECCcceEe
Confidence 2 2223445579999999663 6799998876644
No 290
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=89.46 E-value=18 Score=35.92 Aligned_cols=201 Identities=10% Similarity=0.042 Sum_probs=109.2
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCC----CceEEcccCCcccccee
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTE----NQWSLIAPMNVERSDAS 485 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~----~~W~~~~~~p~~r~~~~ 485 (712)
+.+.++|+.+.....+.+ ....-++++.- +++||+.... ...++++|+.+ .....+-+.... .-.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~-~p~g 81 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQ-APDG 81 (316)
T ss_dssp SSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCS-CCCE
T ss_pred CeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEeCCCC-CcCE
Confidence 458889998887665422 22334555554 5799997542 35799999876 222222111111 1133
Q ss_pred EEE--ECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC--CCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEe
Q psy14726 486 ATT--LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYN 559 (712)
Q Consensus 486 ~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd 559 (712)
+++ .++.||+.-.. .+.++++|+....-+.+. .+..| .++++. ++.||+.... ....|++++
T Consensus 82 lavd~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~----~~~~I~~~~ 149 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG----TPAKIKKGG 149 (316)
T ss_dssp EEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS----SSCEEEEEE
T ss_pred EEEeecCCeEEEEECC-----CCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccC----CCCeEEEEc
Confidence 443 37899997532 356888998765433332 22222 233333 6889988531 135799999
Q ss_pred CCCCcEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEccCC-CCcccceEEEEEcCccee
Q psy14726 560 PVTKTWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDM-NIYRSALSACVIMGLPNV 636 (712)
Q Consensus 560 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~~~~~~~v 636 (712)
+....-+.+.... -..-.+++.- +++||+.-.. ...|+++|+....-..+... .......+.++.++.+|+
T Consensus 150 ~dG~~~~~~~~~~-~~~P~gla~d~~~~~lY~~D~~-----~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~ 223 (316)
T 1ijq_A 150 LNGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFW 223 (316)
T ss_dssp TTSCCEEEEECSS-CSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEE
T ss_pred CCCCCeEEEEECC-CCCceEEEEeccCCEEEEEECC-----CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEE
Confidence 8755444332211 1122344443 6899998432 24789999875433333221 112233456667788888
Q ss_pred Ee
Q psy14726 637 YD 638 (712)
Q Consensus 637 ~~ 638 (712)
..
T Consensus 224 ~d 225 (316)
T 1ijq_A 224 TD 225 (316)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 291
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=89.23 E-value=14 Score=34.50 Aligned_cols=145 Identities=12% Similarity=0.085 Sum_probs=78.0
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCCCc-EE--Ee----CCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeE
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKV-WK--EI----APMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVE 462 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~-W~--~~----~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~ 462 (712)
+++.+++.+|+|=| +.+|+++..... .. .+ +.+|. .-..+... .++++|+|-| +.+|
T Consensus 35 Ai~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG-------~~yW 99 (218)
T 1gen_A 35 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG-------NEYW 99 (218)
T ss_dssp EEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEET-------TEEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeC-------CEEE
Confidence 44556899999977 346666654321 11 11 22332 22222222 2689999977 6789
Q ss_pred EeecCCCc--e-EEccc--CCccccc-eeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeE-----EeC-C-CCCC
Q psy14726 463 KYNYTENQ--W-SLIAP--MNVERSD-ASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT-----LIE-P-MRHR 527 (712)
Q Consensus 463 ~yd~~~~~--W-~~~~~--~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~~-~-~p~~ 527 (712)
+||..+.. + ..+.. +|..... .+|... ++++|++-| +..++||..+++-. .+. . +..+
T Consensus 100 ~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~~w~g~p 172 (218)
T 1gen_A 100 IYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAIP 172 (218)
T ss_dssp EEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHHHSSSCC
T ss_pred EEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhhccCCCC
Confidence 99842110 0 11111 2211111 233332 689999987 56889998776422 111 0 1122
Q ss_pred CcceEEEEEC--CEEEEEcCCCCCCccceEEEEeCCCCc
Q psy14726 528 RSGVSCIAYH--ECIYVIGGFNGMSRMCNGEKYNPVTKT 564 (712)
Q Consensus 528 r~~~~~~~~~--~~iyv~GG~~~~~~~~~v~~yd~~~~~ 564 (712)
..-.++...+ +.+|++-| +..++||..+..
T Consensus 173 ~~idaAf~~~~~g~~YfFkg-------~~y~~~~~~~~~ 204 (218)
T 1gen_A 173 DNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 204 (218)
T ss_dssp SSCSEEEECTTTCEEEEEET-------TEEEEEETTEEE
T ss_pred CCCCEEEEEcCCCcEEEEEC-------CEEEEEECCcee
Confidence 2233455554 89999977 567888876543
No 292
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=89.18 E-value=22 Score=36.53 Aligned_cols=199 Identities=9% Similarity=0.012 Sum_probs=111.5
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEE-
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATT- 488 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~- 488 (712)
..+.++|+.......+... .....+++.- ++.||+.-- ....++++++.....+.+........ .+.++
T Consensus 96 ~~I~~i~~~~~~~~~~~~~--~~~~~gl~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~~~p-~glavd 167 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGLESP-GGLAVD 167 (386)
T ss_dssp SCEEEECTTSCCCEEEECS--CSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCCEEEEECSSCSCC-CCEEEE
T ss_pred ccceeeccCCCcEEEEecC--CCccEEEEEecCCCeEEEEeC-----CCCcEEEEecCCCCcEEEEeCCCCCc-cEEEEE
Confidence 4688888888776655332 2223445543 579998732 23579999998877665532211111 22333
Q ss_pred -ECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC--CCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCC
Q psy14726 489 -LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 489 -~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 563 (712)
.++.||+.-.. .+.++++++....-+.+. .+..| .++++. ++.||+.--.. ...|+++++...
T Consensus 168 ~~~g~lY~~d~~-----~~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td~~~----~~~I~r~~~dG~ 235 (386)
T 3v65_B 168 WVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDGS 235 (386)
T ss_dssp TTTTEEEEEETT-----TTEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTSC
T ss_pred eCCCeEEEEcCC-----CCeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEeccCC----CCEEEEEeCCCC
Confidence 37899997543 246888888755433332 22222 233333 68899874321 367999998754
Q ss_pred cEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEc--cCCCCcccceEEEEEcCcceeEec
Q psy14726 564 TWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA--TDMNIYRSALSACVIMGLPNVYDY 639 (712)
Q Consensus 564 ~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~--~~~p~~r~~~~~~~~~~~~~v~~~ 639 (712)
.-..+..-. -..-.++++- +++||+.-.. ...|+++|+....-..+ ..++ ...+.++.++.+|+...
T Consensus 236 ~~~~~~~~~-~~~PnGlavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~---~P~giav~~~~ly~td~ 306 (386)
T 3v65_B 236 GRRIIADTH-LFWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQGLP---HPFAITVFEDSLYWTDW 306 (386)
T ss_dssp SCEEEECSS-CSCEEEEEEEGGGTEEEEEETT-----TTEEEEECTTSCSCEEEECSSCS---SEEEEEEETTEEEEEET
T ss_pred CcEEEEECC-CCCeeeEEEeCCCCEEEEEECC-----CCEEEEEeCCCCeeEEEEECCCC---CceEEEEECCEEEEeeC
Confidence 433332111 1112244443 7899998432 24789999875432222 2232 22455667788888743
No 293
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=88.97 E-value=13 Score=43.95 Aligned_cols=146 Identities=9% Similarity=0.011 Sum_probs=78.4
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEE-EEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCR-CFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~-~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
..++.++...+....+.. .+..+....... ++..+++++. ...++ .+|..+++...+. -...........
T Consensus 317 ~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~S 387 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLKVPE--PLRIRYVRRGGD-TKVAFIHGTR-----EGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVD 387 (1045)
T ss_dssp TEEEEECTTSSBEEECSC--CSCEEEEEECSS-SEEEEEEEET-----TEEEEEEEETTTCCEEECC-CCCCSEEEEEEC
T ss_pred CEEEEEcCCCCceEEccC--CCcceEEeeeEc-CCCeEEEEEC-----CCceEEEEECCCCCceEec-CCccceeeeEEC
Confidence 356777777666554321 111011111111 4555555442 35788 9999988877665 211222222233
Q ss_pred ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCC-----CCccCceEEeeCCCC
Q psy14726 442 HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNG-----HNCLNSCEVYDPECN 516 (712)
Q Consensus 442 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-----~~~~~~v~~yd~~~~ 516 (712)
-+|+.+++++.. .+++.+|+.+.+-..+..-........+..-+|+.+++++.++ ......++.+|..+.
T Consensus 388 pDG~~la~~~~~-----~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 388 RNGKFAVVANDR-----FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp TTSSEEEEEETT-----SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred CCCCEEEEECCC-----CeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 466766666532 4799999999887665432222222222223676666655432 122467999999988
Q ss_pred eeEEeC
Q psy14726 517 QWTLIE 522 (712)
Q Consensus 517 ~W~~~~ 522 (712)
+...+.
T Consensus 463 ~~~~l~ 468 (1045)
T 1k32_A 463 KIFAAT 468 (1045)
T ss_dssp EEEECS
T ss_pred cEEEee
Confidence 765554
No 294
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=88.60 E-value=6.1 Score=41.29 Aligned_cols=146 Identities=9% Similarity=0.077 Sum_probs=70.7
Q ss_pred CeEEEEcccCCCCCCceeEEeecCCC--------ceEEcccCCccccceeEEEE--CCE-EEEEcccCCCCccCceEEee
Q psy14726 444 DVIYAMGGYNGQRRQNSVEKYNYTEN--------QWSLIAPMNVERSDASATTL--QGK-IYITGGFNGHNCLNSCEVYD 512 (712)
Q Consensus 444 ~~iyv~GG~~~~~~~~~v~~yd~~~~--------~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd 512 (712)
+.+++.|+.+ ..+.+||..+. ....+..+........+..+ ++. +++.|+.++ .+..||
T Consensus 141 ~~~lat~~~d-----g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg-----~i~vwd 210 (430)
T 2xyi_A 141 ACVIATKTPS-----SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH-----TICLWD 210 (430)
T ss_dssp EEEEEEECSS-----SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS-----CEEEEE
T ss_pred CcEEEEECCC-----CcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC-----eEEEEe
Confidence 4677777644 35888887652 12222221111111122223 344 777777654 577888
Q ss_pred CCCC---eeEEeC--CC-CCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCc-EEEcCCCCCCccceEEEEE
Q psy14726 513 PECN---QWTLIE--PM-RHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKT-WSQVPDMYNPRSNFAIEVI 583 (712)
Q Consensus 513 ~~~~---~W~~~~--~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~ 583 (712)
..+. .+.... .+ .....-.+++.. ++.+++.|+.+ ..+..||..+.. ...+..+.........+.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 285 (430)
T 2xyi_A 211 INATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSF 285 (430)
T ss_dssp TTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCSCSSSCSEEEECCSSCEEEEEE
T ss_pred CCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCCCCCcceeEeecCCCCeEEEEe
Confidence 8762 222111 11 111112223332 45677777643 578899988652 1111111111112223333
Q ss_pred ---CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 584 ---DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 584 ---~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
+..+++.|+.++ .+.+||..+
T Consensus 286 ~p~~~~~l~tg~~dg-----~v~vwd~~~ 309 (430)
T 2xyi_A 286 NPYSEFILATGSADK-----TVALWDLRN 309 (430)
T ss_dssp CSSCTTEEEEEETTS-----EEEEEETTC
T ss_pred CCCCCCEEEEEeCCC-----eEEEEeCCC
Confidence 334888888765 578888765
No 295
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=88.31 E-value=16 Score=37.36 Aligned_cols=148 Identities=9% Similarity=0.038 Sum_probs=81.3
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCCCcE--EEe----CCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEE
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVW--KEI----APMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEK 463 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W--~~~----~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~ 463 (712)
+++.+++.+|+|=| +.+|+++.....- ..+ +.+|. ....+... .++++|+|-| +.+|+
T Consensus 185 Av~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wpgLP~-~iDAa~~~~~~g~~~fFkg-------~~yWr 249 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWPTLPS-GIEAAYEIEARNQVFLFKD-------DKYWL 249 (365)
T ss_dssp CEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCSSCCS-SCCEEEEEGGGTEEEEEET-------TEEEE
T ss_pred eEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhccCCCC-CccEEEEecCCCEEEEEeC-------CEEEE
Confidence 34456899999976 3567766543221 111 23332 22222222 3789999977 56788
Q ss_pred eecCCCc--e-EEccc--CCccccce-eEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEE-----eC-CC-CCCC
Q psy14726 464 YNYTENQ--W-SLIAP--MNVERSDA-SATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTL-----IE-PM-RHRR 528 (712)
Q Consensus 464 yd~~~~~--W-~~~~~--~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~~-~~-p~~r 528 (712)
|+..... + ..+.. +|..-..- +|... ++++|+|-| +..|+||..+++-.. +. .. ..+.
T Consensus 250 ~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~ 322 (365)
T 3ba0_A 250 ISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITKNFQGIGP 322 (365)
T ss_dssp CSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHHHSTTCCS
T ss_pred EcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhhcCCCCCC
Confidence 8754321 1 12222 23211122 33333 589999977 568999987664221 00 01 1122
Q ss_pred cceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcEEE
Q psy14726 529 SGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ 567 (712)
Q Consensus 529 ~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 567 (712)
.--++... ++++|.+-| +..|+||..+.+-..
T Consensus 323 ~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 323 KIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITK 355 (365)
T ss_dssp SCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred ccceeeEecCCcEEEEeC-------CEEEEEECCccEEec
Confidence 23344444 889999977 578999998776544
No 296
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.26 E-value=0.55 Score=38.57 Aligned_cols=67 Identities=12% Similarity=-0.047 Sum_probs=46.1
Q ss_pred ceecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCC------------hhhHHHHHHHHHHcccHHHHHHHHHHHHHHH
Q psy14726 157 KLHITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTT------------PRNCFGILLFSRDHFCKKLEEWTRKYILRNF 224 (712)
Q Consensus 157 ~~~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~------------~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f 224 (712)
.-.++.+|+..++.+|+.|++++|.+.|.+|+.+++. .+....++.- +.-.-.++.+++.+|+..+.
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~s-dv~~E~~vf~av~~Wv~~d~ 83 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISD-GVPCSQNPTEAIEAWINFNK 83 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHT-CEETTSCHHHHHHHHHHTTH
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcC-CCCCHHHHHHHHHHHHHcCH
Confidence 3468899999999999999999999999999977643 2222233322 21122447777777775543
No 297
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=88.24 E-value=19 Score=42.69 Aligned_cols=224 Identities=10% Similarity=-0.025 Sum_probs=115.0
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEE-ECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCC---------
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAV-IGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNF--------- 432 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~--------- 432 (712)
..++.++...+....+.... . ....+. -+++.++++. ...++.+|........+..-..
T Consensus 226 ~~l~~~~~~g~~~~~l~~~~----~-~~~~~~SpDG~~la~~~------~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~ 294 (1045)
T 1k32_A 226 GQIYSTDLDGKDLRKHTSFT----D-YYPRHLNTDGRRILFSK------GGSIYIFNPDTEKIEKIEIGDLESPEDRIIS 294 (1045)
T ss_dssp CEEEEEETTSCSCEECCCCC----S-SCEEEEEESSSCEEEEE------TTEEEEECTTTCCEEECCCCCCCBCCSEEEE
T ss_pred eEEEEEeCCCCcceEecCCC----C-cceeeEcCCCCEEEEEe------CCEEEEecCCceEeeeeccCccccccccccc
Confidence 45777777665544432111 1 112222 2555455542 2468888886555544332110
Q ss_pred CcceeEEE-E-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceE-
Q psy14726 433 KRCYVSTA-V-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCE- 509 (712)
Q Consensus 433 ~r~~~~~~-~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~- 509 (712)
...-.+++ . -+|+..+++. ...++.++..+.....+...+..+....+.. +|+.+++++. ...++
T Consensus 295 ~~~v~~~~~S~pdG~~la~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~ 362 (1045)
T 1k32_A 295 IPSKFAEDFSPLDGDLIAFVS------RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-----EGDFLG 362 (1045)
T ss_dssp CGGGGEEEEEECGGGCEEEEE------TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-----TEEEEE
T ss_pred ccccceeeecCCCCCEEEEEE------cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-----CCceEE
Confidence 00122333 3 4565555544 2468888887776555433222122222233 6665555443 24688
Q ss_pred EeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE-ECCEEE
Q psy14726 510 VYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV-IDDMIF 588 (712)
Q Consensus 510 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~ 588 (712)
.||..+.+...+.. ........+..-+++.+++++.+ ..++.+|+.+++-..+........ .+++. -+++.+
T Consensus 363 ~~d~~~~~~~~l~~-~~~~~~~~~~SpDG~~la~~~~~-----~~v~~~d~~tg~~~~~~~~~~~~v-~~~~~SpDG~~l 435 (1045)
T 1k32_A 363 IYDYRTGKAEKFEE-NLGNVFAMGVDRNGKFAVVANDR-----FEIMTVDLETGKPTVIERSREAMI-TDFTISDNSRFI 435 (1045)
T ss_dssp EEETTTCCEEECCC-CCCSEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECSSSCC-CCEEECTTSCEE
T ss_pred EEECCCCCceEecC-CccceeeeEECCCCCEEEEECCC-----CeEEEEECCCCceEEeccCCCCCc-cceEECCCCCeE
Confidence 89998887666651 11122222222256655565532 489999999887766642111111 12222 266655
Q ss_pred EEcccCC-----CceeeeEEEEECCCCeEEEcc
Q psy14726 589 AIGGFNG-----VTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 589 v~GG~~~-----~~~~~~v~~yd~~~~~W~~~~ 616 (712)
++++.++ ......+++||..+++...+.
T Consensus 436 a~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 436 AYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp EEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred EEEecCccccccCCCCCeEEEEECCCCcEEEee
Confidence 6655432 122357999999988865553
No 298
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=87.99 E-value=15 Score=34.45 Aligned_cols=144 Identities=12% Similarity=0.096 Sum_probs=77.5
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCCc-eE--Ec----ccCCccccceeEEEE--CCEEEEEcccCCCCccCce
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ-WS--LI----APMNVERSDASATTL--QGKIYITGGFNGHNCLNSC 508 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~--~~----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v 508 (712)
+++..+|++|+|=| +.+|+++..... .. .+ +.+|. ... +|... ++++|+|-| +..
T Consensus 35 Ai~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~ID-AA~~~~~~~k~yfFkG-------~~y 98 (218)
T 1gen_A 35 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KID-AVYEAPQEEKAVFFAG-------NEY 98 (218)
T ss_dssp EEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCS-CCS-EEEEETTTTEEEEEET-------TEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCC-Ccc-EEEEECCCCEEEEEeC-------CEE
Confidence 45567999999977 456666544321 11 11 22332 222 22222 689999987 568
Q ss_pred EEeeCCCCe---eEEeCC--CCCC-CcceEEEE--ECCEEEEEcCCCCCCccceEEEEeCCCCcEEEc-----C-C-CCC
Q psy14726 509 EVYDPECNQ---WTLIEP--MRHR-RSGVSCIA--YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-----P-D-MYN 573 (712)
Q Consensus 509 ~~yd~~~~~---W~~~~~--~p~~-r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-----~-~-~p~ 573 (712)
|+||..+.. =..+.. +|.. ..--++.. .++++|++-| +..|+||..+++-..- . . +..
T Consensus 99 W~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~~w~g~ 171 (218)
T 1gen_A 99 WIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAI 171 (218)
T ss_dssp EEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHHHSSSC
T ss_pred EEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhhccCCC
Confidence 888842110 011111 2221 11223333 3689999987 5789999876632211 0 0 111
Q ss_pred CccceEEEEEC--CEEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 574 PRSNFAIEVID--DMIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 574 ~r~~~~~~~~~--~~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
+..-.++...+ +.+|++=|. ..|.||..+..
T Consensus 172 p~~idaAf~~~~~g~~YfFkg~-------~y~~~~~~~~~ 204 (218)
T 1gen_A 172 PDNLDAVVDLQGGGHSYFFKGA-------YYLKLENQSLK 204 (218)
T ss_dssp CSSCSEEEECTTTCEEEEEETT-------EEEEEETTEEE
T ss_pred CCCCCEEEEEcCCCcEEEEECC-------EEEEEECCcee
Confidence 22233444544 899999663 57888876554
No 299
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=87.98 E-value=6.4 Score=36.24 Aligned_cols=143 Identities=10% Similarity=0.093 Sum_probs=78.4
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCCc--e-EEc----ccCCccccceeEEEECCEEEEEcccCCCCccCceEE
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--W-SLI----APMNVERSDASATTLQGKIYITGGFNGHNCLNSCEV 510 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W-~~~----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~ 510 (712)
+++..+|++|+|-| +.+|+++...-. . ..+ +.+|. ....+....++++|++-| +..|+
T Consensus 10 A~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~w~glP~-~iDAa~~~~~g~~yfFkg-------~~yw~ 74 (196)
T 3c7x_A 10 TVAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQFWRGLPA-SINTAYERKDGKFVFFKG-------DKHWV 74 (196)
T ss_dssp EEEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHHSTTCCS-SCCEEEECTTSCEEEEET-------TEEEE
T ss_pred EEEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHhccCCCC-CccEEEEeCCCcEEEecC-------CEEEE
Confidence 34467899999977 467777543110 0 111 13443 222221123788999977 45788
Q ss_pred eeCCCCee---EEeCC----CCCCCcceEEEE-ECCEEEEEcCCCCCCccceEEEEeCCCCcEEE-----c---CCCCCC
Q psy14726 511 YDPECNQW---TLIEP----MRHRRSGVSCIA-YHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQ-----V---PDMYNP 574 (712)
Q Consensus 511 yd~~~~~W---~~~~~----~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~---~~~p~~ 574 (712)
|+..+... ..+.. +|.....++... .++++|++-| +..++||..+++-.. + +.+|
T Consensus 75 ~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~~gip-- 145 (196)
T 3c7x_A 75 FDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVWEGIP-- 145 (196)
T ss_dssp EETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGSBTCC--
T ss_pred EeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHCCCcC--
Confidence 87542111 12222 342223333322 2689999987 578999987653211 1 1222
Q ss_pred ccceEEEEE-CC-EEEEEcccCCCceeeeEEEEECCCCe
Q psy14726 575 RSNFAIEVI-DD-MIFAIGGFNGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 575 r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~ 611 (712)
..-.++... ++ ++|++-|. ..|.||..+.+
T Consensus 146 ~~idaAf~~~~~~~~YfFkg~-------~y~r~d~~~~~ 177 (196)
T 3c7x_A 146 ESPRGSFMGSDEVFTYFYKGN-------KYWKFNNQKLK 177 (196)
T ss_dssp SSCSEEEECTTSSEEEEEETT-------EEEEEETTTTE
T ss_pred CCcceeEEecCCCEEEEEECC-------EEEEEECCcce
Confidence 222334444 44 89999663 67999988765
No 300
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=87.77 E-value=7.1 Score=36.85 Aligned_cols=139 Identities=10% Similarity=0.040 Sum_probs=77.2
Q ss_pred ECCeEEEEcccCCCCCCceeEEee------cC---------CCceEEcccCCccccceeEEE--ECCEEEEEcccCCCCc
Q psy14726 442 HHDVIYAMGGYNGQRRQNSVEKYN------YT---------ENQWSLIAPMNVERSDASATT--LQGKIYITGGFNGHNC 504 (712)
Q Consensus 442 ~~~~iyv~GG~~~~~~~~~v~~yd------~~---------~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~ 504 (712)
.+|.+|+|-| ..+|+++ .. +..|..+++.+......-|+. .++++|+|-|
T Consensus 12 ~~ge~~fFk~-------~~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg------ 78 (225)
T 3oyo_A 12 SEYEVYFFAK-------NKYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSG------ 78 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEET------
T ss_pred CCCEEEEEEC-------CEEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcC------
Confidence 4789999966 4577776 11 122332222112112333333 4899999987
Q ss_pred cCceEEeeCCC----CeeEEe--------CCCCCC----CcceEEEE--ECCEEEEEcCCCCCCccceEEEEeCCCCcEE
Q psy14726 505 LNSCEVYDPEC----NQWTLI--------EPMRHR----RSGVSCIA--YHECIYVIGGFNGMSRMCNGEKYNPVTKTWS 566 (712)
Q Consensus 505 ~~~v~~yd~~~----~~W~~~--------~~~p~~----r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 566 (712)
+.+|+||..+ +....- +.+|.. .-. ++.. .++++|++-| +..|+||..+++..
T Consensus 79 -~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~ID-AA~~~~~~gk~yfFkG-------~~yw~~d~~~~~~~ 149 (225)
T 3oyo_A 79 -NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSID-SAFRSTKGKEVYLFKG-------NKYVRIAYDSKQLV 149 (225)
T ss_dssp -TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCC-EEEECSSTTEEEEEET-------TEEEEEETTTTEEE
T ss_pred -CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccc-eEEEECCCCcEEEEeC-------CeEEEEECCCCeec
Confidence 5688887532 222111 123321 122 2222 2689999988 57899997766554
Q ss_pred Ec----C-CCCC------CccceEEEE--ECCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 567 QV----P-DMYN------PRSNFAIEV--IDDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 567 ~~----~-~~p~------~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
.- . ..|. +..--++.. .++++|++-|. ..|+||..+
T Consensus 150 ~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~-------~ywr~d~~~ 198 (225)
T 3oyo_A 150 GNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ-------NYVRIDFTP 198 (225)
T ss_dssp EEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT-------EEEEEECCT
T ss_pred CCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC-------EEEEEeCCc
Confidence 31 1 1121 222334444 37999999763 679999883
No 301
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=87.66 E-value=0.16 Score=52.59 Aligned_cols=143 Identities=13% Similarity=0.208 Sum_probs=57.1
Q ss_pred EEECCeEEEEcccCCCCCCceeEEeecCCCc--eEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCC-
Q psy14726 440 AVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ--WSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECN- 516 (712)
Q Consensus 440 ~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~- 516 (712)
++.++.||+.+. + ..++.+|..+.+ |+.-. . ....+.++.++++|+.|+.+ ..+.++|.+++
T Consensus 6 ~v~~~~v~~gs~-d-----g~v~a~d~~tG~~~W~~~~--~--~~~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~ 70 (369)
T 2hz6_A 6 TLPETLLFVSTL-D-----GSLHAVSKRTGSIKWTLKE--D--PVLQVPTHVEEPAFLPDPND-----GSLYTLGSKNNE 70 (369)
T ss_dssp --CTTEEEEEET-T-----SEEEEEETTTCCEEEEEEC--C--CSCCCC-----CCEEECTTT-----CCEEEC-----C
T ss_pred eeeCCEEEEEcC-C-----CEEEEEECCCCCEEEEecC--C--CceecceEcCCCEEEEeCCC-----CEEEEEECCCCc
Confidence 445667776533 2 468999988764 76543 1 11123344577788887544 35889998665
Q ss_pred -eeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCC--cEEEcCCCCCCccceEEEEECCEEEEEccc
Q psy14726 517 -QWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTK--TWSQVPDMYNPRSNFAIEVIDDMIFAIGGF 593 (712)
Q Consensus 517 -~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 593 (712)
.|+.-...+.......++..++.+|+ |+. -..+.++|+.++ .|+.-.... .+ .+..++.+| +|+.
T Consensus 71 ~~w~~~~~~~~~~~~sp~~~~~~~v~~-g~~-----dg~v~a~D~~tG~~~w~~~~~~~-~~----~~p~~~~v~-~~~~ 138 (369)
T 2hz6_A 71 GLTKLPFTIPELVQASPCRSSDGILYM-GKK-----QDIWYVIDLLTGEKQQTLSSAFA-DS----LSPSTSLLY-LGRT 138 (369)
T ss_dssp CSEECSCCHHHHHTTCSCC-----CCC-CEE-----EEEEEEECCC---------------------------EE-EEEE
T ss_pred eeeeeeccCccccccCceEecCCEEEE-EeC-----CCEEEEEECCCCcEEEEecCCCc-cc----ccccCCEEE-EEec
Confidence 46532211100000001113555554 332 246889998865 465432211 01 111344444 4433
Q ss_pred CCCceeeeEEEEECCCCe--EEE
Q psy14726 594 NGVTTIYHVECYDEKTDE--WYE 614 (712)
Q Consensus 594 ~~~~~~~~v~~yd~~~~~--W~~ 614 (712)
+ ..+..||+.+++ |+.
T Consensus 139 d-----g~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 139 E-----YTITMYDTKTRELRWNA 156 (369)
T ss_dssp E-----EEEECCCSSSSSCCCEE
T ss_pred C-----CEEEEEECCCCCEEEeE
Confidence 2 257788877654 764
No 302
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=87.43 E-value=27 Score=35.59 Aligned_cols=114 Identities=8% Similarity=-0.128 Sum_probs=57.7
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecC----CCCccceEEEEECCC
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFD----GNEYYNSCRCFNAVT 421 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~----~~~~~~~v~~yd~~~ 421 (712)
..+|+.-+....... .+..||+.+++-.. . ++..... .+++. +..+|+..-.. .+...+.+..||+.+
T Consensus 33 ~~~yv~~~~~~~~~~-~v~v~D~~t~~~~~--~--i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 33 RRSYINLPAHHSAII-QQWVLDAGSGSILG--H--VNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CEEEEeCCcccCCcc-EEEEEECCCCeEEE--E--ecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 557776531111111 78899998877442 1 2222222 34443 56788875321 112246788999987
Q ss_pred CcEEEeCCCC-CCc-----ceeEEEE--ECCeEEEEcccCCCCCCceeEEeecCCCceE
Q psy14726 422 KVWKEIAPMN-FKR-----CYVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNYTENQWS 472 (712)
Q Consensus 422 ~~W~~~~~~~-~~r-----~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 472 (712)
.+-..--+++ .+| .-..++. -+..+|+..-. ..+.+.++| .+++-.
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~----~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA----AGPAVGLVV-QGGSSD 160 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC----CCCeEEEEE-CCCCEE
Confidence 6543211222 111 1122333 24467775311 136789999 877643
No 303
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=87.23 E-value=29 Score=35.71 Aligned_cols=151 Identities=11% Similarity=0.137 Sum_probs=75.2
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCC--ceEEcccCC----ccccceeEEEE--CC-EEEEEcccCCCCccCceEEeeC
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTEN--QWSLIAPMN----VERSDASATTL--QG-KIYITGGFNGHNCLNSCEVYDP 513 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p----~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~ 513 (712)
++++++.| .+ ..+..||..+. .+..+...| .......++.+ ++ .+++.|+.++ .+..||.
T Consensus 188 ~~~~l~s~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-----~i~iwd~ 256 (447)
T 3dw8_B 188 DYETYLSA-DD-----LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG-----TIRLCDM 256 (447)
T ss_dssp TSSEEEEE-CS-----SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEe-CC-----CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC-----eEEEEEC
Confidence 55666665 22 56888888732 233221111 11112223333 44 7888887664 5888888
Q ss_pred CCCee-----EEeCCCCCC--C-------cceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCC-CcEE-EcCCCCCCc
Q psy14726 514 ECNQW-----TLIEPMRHR--R-------SGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVT-KTWS-QVPDMYNPR 575 (712)
Q Consensus 514 ~~~~W-----~~~~~~p~~--r-------~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~-~~~~~p~~r 575 (712)
.+.+. ..+.....+ + .....+.+ ++++++.|+. ..+..||..+ .+-. .+......+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~------~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY------LSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES------SEEEEEETTCCSSCSCCEESCGGGT
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC------CeEEEEeCCCCccccceeecccccc
Confidence 87663 223211110 0 02222222 4666666652 5788999875 3210 000000000
Q ss_pred c-------------ceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 576 S-------------NFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 576 ~-------------~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
. ...++.. ++..++.|+.++ .+.+||..+++-..+
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg-----~v~iwd~~~~~~~~~ 379 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNN-----FFRMFDRNTKRDITL 379 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTT-----EEEEEETTTCCEEEE
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccCC-----EEEEEEcCCCcceee
Confidence 0 0113332 566678888765 688999988876543
No 304
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=86.91 E-value=19 Score=36.75 Aligned_cols=145 Identities=8% Similarity=0.004 Sum_probs=81.2
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCCce--EEc----ccCCccccceeEEEE--CCEEEEEcccCCCCccCceE
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQW--SLI----APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCE 509 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W--~~~----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 509 (712)
+++..+|++|+|=| ..+|+++.....- ..+ +.+|. ... ++... ++++|+|-| +..|
T Consensus 185 Av~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wpgLP~-~iD-Aa~~~~~~g~~~fFkg-------~~yW 248 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWPTLPS-GIE-AAYEIEARNQVFLFKD-------DKYW 248 (365)
T ss_dssp CEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCSSCCS-SCC-EEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhccCCCC-Ccc-EEEEecCCCEEEEEeC-------CEEE
Confidence 34557999999966 4567776544221 111 23342 222 23333 789999977 4567
Q ss_pred EeeCCCCe--e-EEeCC--CCCCC-cceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEc---------CCCC
Q psy14726 510 VYDPECNQ--W-TLIEP--MRHRR-SGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV---------PDMY 572 (712)
Q Consensus 510 ~yd~~~~~--W-~~~~~--~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~---------~~~p 572 (712)
+|+..+.. + ..+.. +|... .--++... ++++|+|-| +..|+||..+.+-..- +.+
T Consensus 249 r~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~~f~g~- 320 (365)
T 3ba0_A 249 LISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITKNFQGI- 320 (365)
T ss_dssp ECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHHHSTTC-
T ss_pred EEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhhcCCCC-
Confidence 77654221 1 12322 23211 11233333 589999987 5789999876542211 112
Q ss_pred CCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCCeEEE
Q psy14726 573 NPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 573 ~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 614 (712)
+..--++... ++++|+|=| +..|.||..+.+-..
T Consensus 321 -p~~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 321 -GPKIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITK 355 (365)
T ss_dssp -CSSCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred -CCccceeeEecCCcEEEEeC-------CEEEEEECCccEEec
Confidence 2223344555 899999966 368999998876544
No 305
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=86.90 E-value=8.4 Score=38.06 Aligned_cols=188 Identities=18% Similarity=0.192 Sum_probs=94.0
Q ss_pred ceEEEEECC-CCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCc--EEEeCCCCCCcceeE
Q psy14726 363 DFVETYDTR-ADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKV--WKEIAPMNFKRCYVS 438 (712)
Q Consensus 363 ~~v~~~d~~-~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~r~~~~ 438 (712)
..+.+||+. ...|... ...+ ...+.+.. ++.||+. .. ...+++||+. ++ |..-.+ .... .+
T Consensus 117 ~~l~~~d~~g~~~~~~~--~~~~---~~~~~~~~~~g~l~vg-t~-----~~~l~~~d~~-g~~~~~~~~~--~~~~-~~ 181 (330)
T 3hxj_A 117 GHLYAINTDGTEKWRFK--TKKA---IYATPIVSEDGTIYVG-SN-----DNYLYAINPD-GTEKWRFKTN--DAIT-SA 181 (330)
T ss_dssp SEEEEECTTSCEEEEEE--CSSC---CCSCCEECTTSCEEEE-CT-----TSEEEEECTT-SCEEEEEECS--SCCC-SC
T ss_pred CEEEEEcCCCCEEEEEc--CCCc---eeeeeEEcCCCEEEEE-cC-----CCEEEEECCC-CCEeEEEecC--CCce-ee
Confidence 468889987 3356552 1111 11222333 5677763 22 2468999998 43 654322 2211 22
Q ss_pred EEE-ECCeEEEEcccCCCCCCceeEEeecCC-CceEEcccCCccccceeEEEE-CCEEEEEcccCCCCccCceEEeeCCC
Q psy14726 439 TAV-HHDVIYAMGGYNGQRRQNSVEKYNYTE-NQWSLIAPMNVERSDASATTL-QGKIYITGGFNGHNCLNSCEVYDPEC 515 (712)
Q Consensus 439 ~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~ 515 (712)
.+. .++.||+.. ..+++||... ..|+..... .. -.+.+.- ++.||+... + ..+.+||+..
T Consensus 182 ~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~~~~--~~-~~~~~~~~~g~l~v~t~-~-----~gl~~~~~~g 244 (330)
T 3hxj_A 182 ASIGKDGTIYFGS--------DKVYAINPDGTEKWNFYAGY--WT-VTRPAISEDGTIYVTSL-D-----GHLYAINPDG 244 (330)
T ss_dssp CEECTTCCEEEES--------SSEEEECTTSCEEEEECCSS--CC-CSCCEECTTSCEEEEET-T-----TEEEEECTTS
T ss_pred eEEcCCCEEEEEe--------CEEEEECCCCcEEEEEccCC--cc-eeceEECCCCeEEEEcC-C-----CeEEEECCCC
Confidence 333 467888754 4588888432 246644221 11 1222223 457887532 1 3588888755
Q ss_pred Ce-eEEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCC-cEEEcCCCCCCccceEEEE-ECCEEEEEc
Q psy14726 516 NQ-WTLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTK-TWSQVPDMYNPRSNFAIEV-IDDMIFAIG 591 (712)
Q Consensus 516 ~~-W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~r~~~~~~~-~~~~i~v~G 591 (712)
.. |+....-+ ... +.+.. ++.||+... ...+.+||+... .|..-. +... ..+.+. -++.||+ |
T Consensus 245 ~~~~~~~~~~~--~~~-~~~~~~~g~l~v~t~------~ggl~~~d~~g~~~~~~~~--~~~~-~~~~~~d~~g~l~~-g 311 (330)
T 3hxj_A 245 TEKWRFKTGKR--IES-SPVIGNTDTIYFGSY------DGHLYAINPDGTEKWNFET--GSWI-IATPVIDENGTIYF-G 311 (330)
T ss_dssp CEEEEEECSSC--CCS-CCEECTTSCEEEECT------TCEEEEECTTSCEEEEEEC--SSCC-CSCCEECTTCCEEE-E
T ss_pred CEeEEeeCCCC--ccc-cceEcCCCeEEEecC------CCCEEEECCCCcEEEEEEc--CCcc-ccceEEcCCCEEEE-E
Confidence 44 55443211 111 12333 678887543 136889997433 465432 2211 223333 4677776 5
Q ss_pred ccCC
Q psy14726 592 GFNG 595 (712)
Q Consensus 592 G~~~ 595 (712)
+.++
T Consensus 312 t~~G 315 (330)
T 3hxj_A 312 TRNG 315 (330)
T ss_dssp CTTS
T ss_pred cCCC
Confidence 5444
No 306
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=86.58 E-value=29 Score=34.99 Aligned_cols=214 Identities=12% Similarity=0.015 Sum_probs=120.3
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV 441 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~ 441 (712)
.|..+++.......+. . ......++++. ++.||+.--. ...++++++.......+...... .-.++++
T Consensus 54 ~I~~i~~~g~~~~~~~-~---~~~~~~~l~~d~~~~~ly~~D~~-----~~~I~r~~~~g~~~~~~~~~~~~-~p~glav 123 (349)
T 3v64_C 54 DIRQVLPHRSEYTLLL-N---NLENAIALDFHHRRELVFWSDVT-----LDRILRANLNGSNVEEVVSTGLE-SPGGLAV 123 (349)
T ss_dssp CEEEECTTSCCEEEEE-C---SCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCS-CCCEEEE
T ss_pred ceEEEeCCCCeeEEee-c---CCCceEEEEEeccccEEEEEecc-----CCceEEEecCCCCceEEEeCCCC-CccEEEE
Confidence 4677777777665532 1 12223455554 6789987432 35789999988765554222111 1123444
Q ss_pred --ECCeEEEEcccCCCCCCceeEEeecCCCceEEcc--cCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCC
Q psy14726 442 --HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA--PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPEC 515 (712)
Q Consensus 442 --~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~ 515 (712)
.++.||+.-.. .+.++++++....-..+. .+..| .++++- ++.||+.--.. ...++++++..
T Consensus 124 d~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~----~~~I~r~~~dG 191 (349)
T 3v64_C 124 DWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDG 191 (349)
T ss_dssp ETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTS
T ss_pred ecCCCeEEEEcCC-----CCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC----CCEEEEEeCCC
Confidence 47899997432 357899998766543332 22222 123333 68899875322 35799999876
Q ss_pred CeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEccc
Q psy14726 516 NQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGF 593 (712)
Q Consensus 516 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~ 593 (712)
..-+.+..-.. ..-.+.+.- +++||+.-.. ...|+++|+....-..+.... ...-.++++.++.||+.-..
T Consensus 192 ~~~~~~~~~~~-~~PnGla~d~~~~~lY~aD~~-----~~~I~~~~~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~~ 264 (349)
T 3v64_C 192 SGRRIIADTHL-FWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDWH 264 (349)
T ss_dssp CSCEESCCSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSS-CSSEEEEEEETTEEEEEETT
T ss_pred CCcEEEEECCC-CCcceEEEeCCCCEEEEEECC-----CCEEEEEeCCCCceEEEEeCC-CCCceEEEEECCEEEEecCC
Confidence 54444422111 112233432 6899998532 368999998754322221111 12235666789999998433
Q ss_pred CCCceeeeEEEEECCCCe
Q psy14726 594 NGVTTIYHVECYDEKTDE 611 (712)
Q Consensus 594 ~~~~~~~~v~~yd~~~~~ 611 (712)
+ ..|..+|..+++
T Consensus 265 ~-----~~V~~~~~~~G~ 277 (349)
T 3v64_C 265 T-----KSINSANKFTGK 277 (349)
T ss_dssp T-----TEEEEEETTTCC
T ss_pred C-----CeEEEEEccCCC
Confidence 2 368888865543
No 307
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=86.57 E-value=0.32 Score=48.16 Aligned_cols=34 Identities=9% Similarity=0.292 Sum_probs=31.2
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNF 224 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f 224 (712)
.++.+|+..++.+|+.++++.|.+.|.+|+.+++
T Consensus 106 ~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~l 139 (279)
T 3i3n_A 106 RVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKL 139 (279)
T ss_dssp EEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHcC
Confidence 5678999999999999999999999999998864
No 308
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=86.41 E-value=1.2 Score=36.58 Aligned_cols=33 Identities=6% Similarity=0.068 Sum_probs=30.9
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRN 223 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 223 (712)
.++.+|+..++.+|+.++++.|.+.|.+|+.++
T Consensus 76 ~~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 76 DLEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 577899999999999999999999999999876
No 309
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=86.36 E-value=29 Score=34.73 Aligned_cols=215 Identities=11% Similarity=0.134 Sum_probs=108.2
Q ss_pred ceEEEEECCCCcEEEcccCC----CCCCCcceEEEEE----CCEEEEEeec------CCC--CccceEEEEECC---CCc
Q psy14726 363 DFVETYDTRADRWVKIEQVD----PMGPRAYHGTAVI----GYNIYVIGGF------DGN--EYYNSCRCFNAV---TKV 423 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~----~~~~r~~~~~~~~----~~~lyv~GG~------~~~--~~~~~v~~yd~~---~~~ 423 (712)
..|..+|+..+.-..+.... ........++.+. ++.|+++.-. .+. ...+.+.+||+. +++
T Consensus 35 g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~ 114 (334)
T 2p9w_A 35 GRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSK 114 (334)
T ss_dssp TEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCC
T ss_pred CEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCC
Confidence 46888999866544432211 1112223556662 5788886321 011 124669999988 543
Q ss_pred --EEE-eCCCCCC-------cce-e-EEE-EECCeEEEEcccCCCCCCceeEEeecCCCc---eEEcccCCccccceeEE
Q psy14726 424 --WKE-IAPMNFK-------RCY-V-STA-VHHDVIYAMGGYNGQRRQNSVEKYNYTENQ---WSLIAPMNVERSDASAT 487 (712)
Q Consensus 424 --W~~-~~~~~~~-------r~~-~-~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~~r~~~~~~ 487 (712)
|.. ++..... +.. . -++ --+|.+||.|.... ..++++||.... |-.-.+....+.+....
T Consensus 115 ~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~----~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGI 190 (334)
T 2p9w_A 115 PVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM----PAIARVSADGKTVSTFAWESGNGGQRPGYSGI 190 (334)
T ss_dssp CSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS----CEEEEECTTSCCEEEEEECCCCSSSCCSCSEE
T ss_pred EEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC----CeEEEEeCCCCEEeeeeecCCCcccccCcceE
Confidence 542 2111111 221 1 122 23689999765421 469999998653 54333334456566555
Q ss_pred EE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEeC----CCC-CCCcceE--EEEECCEEEEEcCCCCCCccceEEE
Q psy14726 488 TL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE----PMR-HRRSGVS--CIAYHECIYVIGGFNGMSRMCNGEK 557 (712)
Q Consensus 488 ~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~----~~p-~~r~~~~--~~~~~~~iyv~GG~~~~~~~~~v~~ 557 (712)
++ +..|++..+ . ..+.+||..+-....++ ... .....-+ ....+|++.+++-. .+.++.
T Consensus 191 v~~pdg~~Liv~~~-~-----g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~-----~~~~~~ 259 (334)
T 2p9w_A 191 TFDPHSNKLIAFGG-P-----RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR-----APYAIS 259 (334)
T ss_dssp EEETTTTEEEEESS-S-----SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE-----TTEEEE
T ss_pred EEeCCCCEEEEEcC-C-----CeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcC-----CCCEEE
Confidence 54 346676665 3 45889998743320111 000 0011112 23368888555431 133444
Q ss_pred EeCCCCcEEEcC---CCCC---CccceEEEE----ECCEEEEEccc
Q psy14726 558 YNPVTKTWSQVP---DMYN---PRSNFAIEV----IDDMIFAIGGF 593 (712)
Q Consensus 558 yd~~~~~W~~~~---~~p~---~r~~~~~~~----~~~~i~v~GG~ 593 (712)
+-...+ |.... ..|. ++....+++ .+++||++.++
T Consensus 260 l~S~Dg-W~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 260 FRSWDN-WKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp EECSST-TSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECC
T ss_pred EECCCC-cceeEEeeeecCccccCceeEEEEeccccCCeEEEEeee
Confidence 444444 87652 2222 343334444 58899998754
No 310
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=85.62 E-value=0.3 Score=47.63 Aligned_cols=34 Identities=3% Similarity=-0.034 Sum_probs=30.5
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNF 224 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f 224 (712)
.++.+|+..++.+|+.++++.|.+.|.+|+.+++
T Consensus 98 ~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l 131 (256)
T 3hve_A 98 RLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCI 131 (256)
T ss_dssp CCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTC
T ss_pred cccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhC
Confidence 5788999999999999999999999999998764
No 311
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=85.44 E-value=29 Score=35.12 Aligned_cols=115 Identities=13% Similarity=0.110 Sum_probs=58.5
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEE-C-CeEEEEcccCCC----CCCceeEEeecCCCc
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH-H-DVIYAMGGYNGQ----RRQNSVEKYNYTENQ 470 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~----~~~~~v~~yd~~~~~ 470 (712)
..+|+.-........+.++.||+.+++-.. .++..... .++.. + ..+|+..-..+. ...+.+..||+.+.+
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~--~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~ 92 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLG--MVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT 92 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEE--EEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEE--EecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc
Confidence 356766432111123578999998887542 23333333 33333 3 478887522110 123569999988755
Q ss_pred eEEcccCCccc----cceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCee
Q psy14726 471 WSLIAPMNVER----SDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQW 518 (712)
Q Consensus 471 W~~~~~~p~~r----~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 518 (712)
-...-+++..+ .......+ +..+|+.... ..+++.+||..+++-
T Consensus 93 ~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~----~~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 93 FEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS----PATSIGIVDVAKGDY 143 (361)
T ss_dssp EEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES----SSEEEEEEETTTTEE
T ss_pred EEEEEEcCccccccCCCcceEEECCCCCEEEEECCC----CCCeEEEEECCCCcE
Confidence 32211112111 11222333 4467776421 125788899888754
No 312
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=85.06 E-value=16 Score=41.10 Aligned_cols=214 Identities=9% Similarity=-0.023 Sum_probs=114.2
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCC----CcEEEeC--CCCCCcc
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVT----KVWKEIA--PMNFKRC 435 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~----~~W~~~~--~~~~~r~ 435 (712)
.|..++........+. +.....+++++. ++.||+.-.. ...|+++++.. ..-..+. .+..|
T Consensus 387 ~I~~id~~~~~~~~~~----~~~~~p~gla~d~~~~~Ly~sD~~-----~~~I~~~~~~g~~~~~~~~~~i~~~~~~P-- 455 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLI----PNLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP-- 455 (699)
T ss_dssp C-CEECTTSCCEECCS----CCCTTCCCCEEETTTTEEEECCTT-----TTSBEEEESCCCCC-CCCCCBCCSCC--C--
T ss_pred ceEEEeCCCCcceeee----ccCcceEEEccccccCeEEEEecC-----CCeEEEEecCCCCCCcceEEEEeCCCCCc--
Confidence 4566677766665431 112233455554 6788877432 24688888875 1111111 11111
Q ss_pred eeEEEE--ECCeEEEEcccCCCCCCceeEEeecCCCceEEccc--CCccccceeEEE--ECCEEEEEcccCCCCccCceE
Q psy14726 436 YVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP--MNVERSDASATT--LQGKIYITGGFNGHNCLNSCE 509 (712)
Q Consensus 436 ~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~--~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~ 509 (712)
.++++ .+++||+.-. ..+.|+++|+....-..+.. +..++ ++++ .++.||+..-. ....++
T Consensus 456 -~glavD~~~g~LY~tD~-----~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~----~~~~I~ 522 (699)
T 1n7d_A 456 -DGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG----TPAKIK 522 (699)
T ss_dssp -CCEECCCSSSBCEECCT-----TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS----SSCCEE
T ss_pred -ceEEEEeeCCcEEEEec-----cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC----CCCeEE
Confidence 23443 4688998632 23568999988765444422 22221 2222 26788876421 125688
Q ss_pred EeeCCCCeeEEeC--CCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCC-CCccceEEEEEC
Q psy14726 510 VYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMY-NPRSNFAIEVID 584 (712)
Q Consensus 510 ~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~ 584 (712)
++++....-+.+. .+..| .++++- +++||+.-.. ...|+++|+....-..+...+ ......++++.+
T Consensus 523 ~~~~dG~~~~~l~~~~l~~P---nGlavd~~~~~LY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~ 594 (699)
T 1n7d_A 523 KGGLNGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE 594 (699)
T ss_dssp BCCSSSCCCCEESCSSCSSC---CCEEECTTTCCEEEEETT-----TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET
T ss_pred EEeCCCCCeeEEEeCCCCCc---cEEEEeccCCEEEEEecC-----CCeEEEEccCCCceEEEEecCCcCCCceEeEEEC
Confidence 8887654433332 22222 123332 5789998642 467999998754333333221 112334667778
Q ss_pred CEEEEEcccCCCceeeeEEEEECCCCeEEE
Q psy14726 585 DMIFAIGGFNGVTTIYHVECYDEKTDEWYE 614 (712)
Q Consensus 585 ~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 614 (712)
+.||+.-.. ...|.++|+.+++-..
T Consensus 595 ~~lywtd~~-----~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 595 DKVFWTDII-----NEAIFSANRLTGSDVN 619 (699)
T ss_dssp TEEEEECST-----TTCEEEEETTTEEEEE
T ss_pred CEEEEEeCC-----CCeEEEEEccCCCceE
Confidence 899998532 2368999987765443
No 313
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=84.99 E-value=34 Score=34.41 Aligned_cols=201 Identities=8% Similarity=-0.005 Sum_probs=112.2
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEE--ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEE-
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATT- 488 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~- 488 (712)
..+.++++.......+.+- .....+++. .++.||+.-- ....++++++.....+.+........ .+.++
T Consensus 53 ~~I~~i~~~g~~~~~~~~~--~~~~~~l~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~~~p-~glavd 124 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGLESP-GGLAVD 124 (349)
T ss_dssp SCEEEECTTSCCEEEEECS--CSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCSCEEEECSSCSCC-CEEEEE
T ss_pred cceEEEeCCCCeeEEeecC--CCceEEEEEeccccEEEEEec-----cCCceEEEecCCCCceEEEeCCCCCc-cEEEEe
Confidence 4578888888777655332 122344444 3679998742 23579999998876555422111111 23333
Q ss_pred -ECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC--CCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCC
Q psy14726 489 -LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 489 -~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 563 (712)
.++.||+.-.. .+.++++++....-+.+. .+..| .++++. ++.||+.--.. ...|+++++...
T Consensus 125 ~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~----~~~I~r~~~dG~ 192 (349)
T 3v64_C 125 WVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDGS 192 (349)
T ss_dssp TTTTEEEEEETT-----TTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTSC
T ss_pred cCCCeEEEEcCC-----CCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC----CCEEEEEeCCCC
Confidence 37899997543 257888888765433332 22222 233443 68899885321 367999998765
Q ss_pred cEEEcCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEEEcCcceeEec
Q psy14726 564 TWSQVPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGLPNVYDY 639 (712)
Q Consensus 564 ~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~~~v~~~ 639 (712)
.-+.+..-.. ..-.++++- +++||+.-.. ...|+.+|+....-..+.... .....+.++.++.+|+...
T Consensus 193 ~~~~~~~~~~-~~PnGla~d~~~~~lY~aD~~-----~~~I~~~~~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~ 263 (349)
T 3v64_C 193 GRRIIADTHL-FWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDW 263 (349)
T ss_dssp SCEESCCSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSS-CSSEEEEEEETTEEEEEET
T ss_pred CcEEEEECCC-CCcceEEEeCCCCEEEEEECC-----CCEEEEEeCCCCceEEEEeCC-CCCceEEEEECCEEEEecC
Confidence 4444422111 112344443 7899998432 247899998754333321111 1123455667888888743
No 314
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=84.89 E-value=4.8 Score=38.11 Aligned_cols=101 Identities=11% Similarity=0.062 Sum_probs=57.7
Q ss_pred EECCeEEEEcccCCCCCCceeEEee--cCCCceE------Ec----ccCC----ccccceeEEEE--CCEEEEEcccCCC
Q psy14726 441 VHHDVIYAMGGYNGQRRQNSVEKYN--YTENQWS------LI----APMN----VERSDASATTL--QGKIYITGGFNGH 502 (712)
Q Consensus 441 ~~~~~iyv~GG~~~~~~~~~v~~yd--~~~~~W~------~~----~~~p----~~r~~~~~~~~--~~~iyv~GG~~~~ 502 (712)
..+|++|+|-| +.+|+|+ +.+.... .+ +.+| ..... +|... ++++|+|-|
T Consensus 70 ~~~g~~~fFKg-------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~ID-AA~~~~~~~k~yfFkG---- 137 (227)
T 3lp9_A 70 TENNEAFIFYE-------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGID-AAYRSTRGKEVYLFKG---- 137 (227)
T ss_dssp CSTTEEEEEET-------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCS-EEEECSSTTEEEEEET----
T ss_pred CCCCEEEEEeC-------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCccc-EEEEECCCCEEEEEEC----
Confidence 36899999977 5788888 3221111 11 1232 11222 22222 689999987
Q ss_pred CccCceEEeeCCCCeeE-----EeC-CCCC------CCcceEEEE--ECCEEEEEcCCCCCCccceEEEEeCCCC
Q psy14726 503 NCLNSCEVYDPECNQWT-----LIE-PMRH------RRSGVSCIA--YHECIYVIGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 503 ~~~~~v~~yd~~~~~W~-----~~~-~~p~------~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 563 (712)
+..|+||..+++-. .+. .+|. +..--++.. .++++|++-| +.-|+||..+.
T Consensus 138 ---~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 138 ---DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD-------DHYARVKVTPX 202 (227)
T ss_dssp ---TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------TEEEEEECCSS
T ss_pred ---CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC-------CEEEEEECCcc
Confidence 56899998765421 111 1221 112223333 3589999987 57889998765
No 315
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=84.50 E-value=19 Score=39.14 Aligned_cols=258 Identities=12% Similarity=0.069 Sum_probs=140.5
Q ss_pred CceEEEEECCCCcEEEcccCCCCCCCcceEEEEE----CCEEEEEeecCC------------CCccceEEEEECCCCc--
Q psy14726 362 TDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI----GYNIYVIGGFDG------------NEYYNSCRCFNAVTKV-- 423 (712)
Q Consensus 362 ~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~----~~~lyv~GG~~~------------~~~~~~v~~yd~~~~~-- 423 (712)
.+.|.+.|..+.+-..+- .+|.....|++++. ++++|+.+.+.. +...+.+-..|..+.+
T Consensus 111 ~~rVavIdl~t~~~~~ii--~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~ 188 (595)
T 1fwx_A 111 NTRVARVRCDVMKCDAIL--EIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVA 188 (595)
T ss_dssp TTEEEEEETTTTEEEEEE--ECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEE
T ss_pred CCEEEEEECCCceEeeEE--eCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEE
Confidence 456888999988765532 34544556777763 577877764311 2334578889999876
Q ss_pred EEEe-CCCC-------CCcceeEEEEEC--------------CeEEEEccc-------CC-CCCCceeEEeecCCCceEE
Q psy14726 424 WKEI-APMN-------FKRCYVSTAVHH--------------DVIYAMGGY-------NG-QRRQNSVEKYNYTENQWSL 473 (712)
Q Consensus 424 W~~~-~~~~-------~~r~~~~~~~~~--------------~~iyv~GG~-------~~-~~~~~~v~~yd~~~~~W~~ 473 (712)
|+-. +.-| ..++.+.++.-. +.+.|+--. .+ ....+.|-+.|+.+.+...
T Consensus 189 ~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~ 268 (595)
T 1fwx_A 189 WQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSL 268 (595)
T ss_dssp EEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCS
T ss_pred EEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCce
Confidence 4422 1211 112222221111 112222100 01 1123568889988854444
Q ss_pred -cccCCccccceeEEEE-CC-EEEEEcccCCCCccCceEEeeCCCCe-e---------EEeCCCCC-CCcceEEEEECCE
Q psy14726 474 -IAPMNVERSDASATTL-QG-KIYITGGFNGHNCLNSCEVYDPECNQ-W---------TLIEPMRH-RRSGVSCIAYHEC 539 (712)
Q Consensus 474 -~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~-W---------~~~~~~p~-~r~~~~~~~~~~~ 539 (712)
+...|.+..-|++..- +| .+||.++.+ +.|.+||..+.+ + ..+...+. .+-.|.+..-+|.
T Consensus 269 ~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s-----~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~ 343 (595)
T 1fwx_A 269 FTRYIPIANNPHGCNMAPDKKHLCVAGKLS-----PTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGN 343 (595)
T ss_dssp SEEEEEEESSCCCEEECTTSSEEEEECTTS-----SBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSE
T ss_pred eEEEEecCCCceEEEEcCCCCEEEEeCCCC-----CeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCe
Confidence 4456666677777666 44 577776543 678999988652 1 11222222 2334555545678
Q ss_pred EEEEcCCCCCCccceEEEEeCCC--------CcEEEcCCCCCCcc-ceEEEEE-------CCEEEEEcccCCCce-----
Q psy14726 540 IYVIGGFNGMSRMCNGEKYNPVT--------KTWSQVPDMYNPRS-NFAIEVI-------DDMIFAIGGFNGVTT----- 598 (712)
Q Consensus 540 iyv~GG~~~~~~~~~v~~yd~~~--------~~W~~~~~~p~~r~-~~~~~~~-------~~~i~v~GG~~~~~~----- 598 (712)
+|+.-..+ +.|..||.++ +.+..+..++..-. +|..+.. +..+|+.-+.+...+
T Consensus 344 aY~t~~ld-----sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp 418 (595)
T 1fwx_A 344 AYTSLFLD-----SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGP 418 (595)
T ss_dssp EEEEETTT-----TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCS
T ss_pred EEEEEecC-----CcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCC
Confidence 88886543 5677787765 23555544443322 3333322 556777766553322
Q ss_pred --eeeEEEEECCCCeEEEccCCCCcccceEEEEEc
Q psy14726 599 --IYHVECYDEKTDEWYEATDMNIYRSALSACVIM 631 (712)
Q Consensus 599 --~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 631 (712)
-..-.+||+..++=..+...|..-..|-++++.
T Consensus 419 ~~~~~~ql~dis~~~m~lv~d~p~~~ePh~~~i~~ 453 (595)
T 1fwx_A 419 LKPENDQLIDISGDKMVLVHDGPTFAEPHDAIAVH 453 (595)
T ss_dssp SCCEEEEEEECSSSSCEEEEEEEESSCCCCEEEEC
T ss_pred CCCCcceEEEcCCCcEEEEEEEcCCCCCCceEEcc
Confidence 123478999888887776666544445555554
No 316
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=84.22 E-value=36 Score=34.08 Aligned_cols=182 Identities=6% Similarity=-0.007 Sum_probs=88.7
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++.+.+.||.+ ..+..+|..+++-...-..+. .-.++....+.+++... +.+..||..+.. ..+.
T Consensus 70 ~~~~~~~~~~d-----~~v~iWd~~~~~~~~~~~~~~--~v~~v~~~~~~~~~~~~-------~~i~i~d~~~~~-~~~~ 134 (355)
T 3vu4_A 70 TNYVAFVTGVK-----EVVHIWDDVKKQDVSRIKVDA--PVKDLFLSREFIVVSYG-------DVISVFKFGNPW-KRIT 134 (355)
T ss_dssp SSEEEEECSST-----TEEEEEETTTTEEEEEEECSS--CEEEEEECSSEEEEEET-------TEEEEEESSTTC-CBSS
T ss_pred CCEEEEEECCc-----cEEEEEECCCCcEEEEEECCC--ceEEEEEcCCEEEEEEc-------CEEEEEECCCCc-eeeE
Confidence 45666777643 378999998887543222222 12233333444444321 468888887651 1121
Q ss_pred cCCccccceeEEEE-CCEEEEE-cccCCCCccCceEEeeCCCCe-eEE-------------eCCCCCCCcceEEEEE--C
Q psy14726 476 PMNVERSDASATTL-QGKIYIT-GGFNGHNCLNSCEVYDPECNQ-WTL-------------IEPMRHRRSGVSCIAY--H 537 (712)
Q Consensus 476 ~~p~~r~~~~~~~~-~~~iyv~-GG~~~~~~~~~v~~yd~~~~~-W~~-------------~~~~p~~r~~~~~~~~--~ 537 (712)
.+.. ....+.+ .+.+.+. |+.+ ..+..||..+.. +.. +..+........++.+ +
T Consensus 135 ~~~~---~~~~~~~s~~~la~~sg~~~-----g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~ 206 (355)
T 3vu4_A 135 DDIR---FGGVCEFSNGLLVYSNEFNL-----GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK 206 (355)
T ss_dssp CCEE---EEEEEEEETTEEEEEESSCT-----TCEEEEECCC------------------CCEEECCCSSCEEEEEECTT
T ss_pred Eecc---CCceEEEEccEEEEeCCCcC-----cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC
Confidence 1111 1112222 3444444 4433 358888887653 110 1111111122223333 6
Q ss_pred CEEEEEcCCCCCCccce-EEEEeCCCCcEEEc-CCCCCCccceEEEEE-CCEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 538 ECIYVIGGFNGMSRMCN-GEKYNPVTKTWSQV-PDMYNPRSNFAIEVI-DDMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 538 ~~iyv~GG~~~~~~~~~-v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
+.+++.|+.+ .. +..||..+.+-... ..-.....-.+++.. +++.++.|+.++ .+.+||..+.
T Consensus 207 g~~l~s~s~d-----~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~-----~v~iw~~~~~ 272 (355)
T 3vu4_A 207 SDMVATCSQD-----GTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKW-----TLHVFEIFND 272 (355)
T ss_dssp SSEEEEEETT-----CSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTC-----EEEEEESSCC
T ss_pred CCEEEEEeCC-----CCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCC-----EEEEEEccCC
Confidence 7777888764 44 78899887643322 100011111222222 678888888764 6788887654
No 317
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=84.03 E-value=23 Score=33.07 Aligned_cols=135 Identities=15% Similarity=0.247 Sum_probs=73.7
Q ss_pred ECCeEEEEcccCCCCCCceeEEeecCCCce--EEc----ccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCC
Q psy14726 442 HHDVIYAMGGYNGQRRQNSVEKYNYTENQW--SLI----APMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPEC 515 (712)
Q Consensus 442 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W--~~~----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 515 (712)
.+|++|+|=| +.+|+++.....+ ..+ +.+|. ... +|...++++|+|-| +.+|+|+..+
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP~-~ID-AA~~~~~~~yfFkG-------~~yw~~~~~~ 90 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPS-TVD-AAFSWEDKLYLIQD-------TKVYVFLTKG 90 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSCS-SCS-EEEEETTEEEEEET-------TEEEEEECSS
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCCC-Ccc-EEEEECCcEEEecC-------CEEEEEeCCC
Confidence 5789999977 4567776543322 112 12332 222 34445899999977 5688888653
Q ss_pred C-ee-----EEeC---CCCCC--Ccce-EEEEE--CCEEEEEcCCCCCCccceEEEEeCCC---CcEEEcCCCCCCccce
Q psy14726 516 N-QW-----TLIE---PMRHR--RSGV-SCIAY--HECIYVIGGFNGMSRMCNGEKYNPVT---KTWSQVPDMYNPRSNF 578 (712)
Q Consensus 516 ~-~W-----~~~~---~~p~~--r~~~-~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~ 578 (712)
+ +- +.+. .+|.. .... ++... ++++|++-| +..|+||..+ ..|...+.+|. ...
T Consensus 91 ~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~P~~i~~~~~g~p~-~vd- 161 (219)
T 1hxn_A 91 GYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELPWPHE-KVD- 161 (219)
T ss_dssp SCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEECCSCS-CCS-
T ss_pred CceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCCCceEhhhcCCCCCC-CcC-
Confidence 2 10 1111 23322 1112 22222 589999988 5679999654 24444333322 222
Q ss_pred EEEE------------ECCEEEEEcccCCCceeeeEEEEECC
Q psy14726 579 AIEV------------IDDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 579 ~~~~------------~~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
++.. .++.+|++-|. ..|.||..
T Consensus 162 Aa~~~~~~~~~~~~~~~~~~~YFFkg~-------~y~r~~~~ 196 (219)
T 1hxn_A 162 GALCMEKPLGPNSCSTSGPNLYLIHGP-------NLYCYRHV 196 (219)
T ss_dssp EEEEESSCSSSCCSCSSSCEEEEEETT-------EEEEESSH
T ss_pred EEEEccccccccceeccCCeEEEEECC-------EEEEEeCC
Confidence 3333 35678888663 46777754
No 318
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=83.98 E-value=69 Score=37.09 Aligned_cols=188 Identities=10% Similarity=-0.006 Sum_probs=96.7
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA 475 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 475 (712)
++.+++.|+.+ ..+..||..+..-... .+....-.+++...|+..+.|+.+ ..+.+||..+.+-...
T Consensus 28 dg~~lAsgs~D-----g~I~lw~~~~~~~~~~--~~~~~~V~~l~fspg~~L~S~s~D-----~~v~lWd~~~~~~~~~- 94 (902)
T 2oaj_A 28 TQNLLAIATVT-----GEVHIYGQQQVEVVIK--LEDRSAIKEMRFVKGIYLVVINAK-----DTVYVLSLYSQKVLTT- 94 (902)
T ss_dssp TTTEEEEEETT-----SEEEEECSTTCEEEEE--CSSCCCEEEEEEETTTEEEEEETT-----CEEEEEETTTCSEEEE-
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCcEEEEE--cCCCCCEEEEEEcCCCEEEEEECc-----CeEEEEECCCCcEEEE-
Confidence 45566677654 3577777665543222 111122233444446655555533 5788999887654221
Q ss_pred cCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeC--------CCCCC--CcceEEEEEC--CEEE
Q psy14726 476 PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--------PMRHR--RSGVSCIAYH--ECIY 541 (712)
Q Consensus 476 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--------~~p~~--r~~~~~~~~~--~~iy 541 (712)
+... ....++.+ ++..++.|+.++ .+..||..+..-.... ..+.. -.-.+++... +.++
T Consensus 95 -~~~~-~~V~~v~~sp~g~~l~sgs~dg-----~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 95 -VFVP-GKITSIDTDASLDWMLIGLQNG-----SMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp -EECS-SCEEEEECCTTCSEEEEEETTS-----CEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred -EcCC-CCEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 1111 11222222 566667776553 5888998887643110 00111 1112333332 3566
Q ss_pred EEcCCCCCCccceEEEEeCCCCcEEEcCCC------CC---------C-ccceEEEEE--CCEEEEEcccCCCceeeeEE
Q psy14726 542 VIGGFNGMSRMCNGEKYNPVTKTWSQVPDM------YN---------P-RSNFAIEVI--DDMIFAIGGFNGVTTIYHVE 603 (712)
Q Consensus 542 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~------p~---------~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~ 603 (712)
++|+.+ ..+ .||..+.+-...-.. +. . ......+.+ ++..++.|+.++ .+.
T Consensus 168 ~~g~~d-----g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg-----~i~ 236 (902)
T 2oaj_A 168 LISYEY-----VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN-----SLV 236 (902)
T ss_dssp EEECSS-----CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC-----CEE
T ss_pred EEEeCC-----CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC-----eEE
Confidence 677643 457 899887754322110 00 0 011222333 678888888765 678
Q ss_pred EEECCCCeEEE
Q psy14726 604 CYDEKTDEWYE 614 (712)
Q Consensus 604 ~yd~~~~~W~~ 614 (712)
+||..+++-..
T Consensus 237 lWd~~~g~~~~ 247 (902)
T 2oaj_A 237 FWDANSGHMIM 247 (902)
T ss_dssp EEETTTCCEEE
T ss_pred EEECCCCcEEE
Confidence 89998876543
No 319
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=83.61 E-value=46 Score=35.71 Aligned_cols=172 Identities=8% Similarity=0.047 Sum_probs=83.6
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
++..++.|+.+ ..+..||.....-..+..... . -.+++. .+++.++.|+.+ ..+..||.....-..+
T Consensus 396 dg~~l~~~~~d-----~~v~~~~~~~~~~~~~~~~~~-~-v~~~~~s~d~~~l~~~~~d-----~~v~~w~~~~~~~~~~ 463 (577)
T 2ymu_A 396 DGQTIASASDD-----KTVKLWNRNGQLLQTLTGHSS-S-VWGVAFSPDDQTIASASDD-----KTVKLWNRNGQLLQTL 463 (577)
T ss_dssp TSSCEEEEETT-----SEEEEECTTCCEEEEEECCSS-C-EEEEEECTTSSEEEEEETT-----SEEEEEETTSCEEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCEEEEecCCCC-C-eEEEEECCCCCEEEEEcCC-----CEEEEEECCCCEEEEE
Confidence 56666777643 357778854433333322111 1 112222 356777777643 4578888655443333
Q ss_pred ccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCCCCCcc
Q psy14726 475 APMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFNGMSRM 552 (712)
Q Consensus 475 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 552 (712)
..- .....++.+ ++++++.|+.++ .+..||.....-..+..... .....+..-++++++.||.+
T Consensus 464 ~~~---~~~v~~~~~spd~~~las~~~d~-----~i~iw~~~~~~~~~~~~h~~-~v~~l~~s~dg~~l~s~~~d----- 529 (577)
T 2ymu_A 464 TGH---SSSVRGVAFSPDGQTIASASDDK-----TVKLWNRNGQLLQTLTGHSS-SVRGVAFSPDGQTIASASDD----- 529 (577)
T ss_dssp ECC---SSCEEEEEECTTSCEEEEEETTS-----EEEEEETTSCEEEEEECCSS-CEEEEEECTTSSCEEEEETT-----
T ss_pred cCC---CCCEEEEEEcCCCCEEEEEeCCC-----EEEEEcCCCCEEEEEeCCCC-CEEEEEEcCCCCEEEEEECc-----
Confidence 221 111222223 678888877653 57778864433222221111 11111122256777777754
Q ss_pred ceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCC
Q psy14726 553 CNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNG 595 (712)
Q Consensus 553 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~ 595 (712)
..+..||.....-..+..... .-.+++.. +++.++.||.++
T Consensus 530 g~v~lwd~~~~~~~~~~~h~~--~v~~~~fs~dg~~l~s~~~D~ 571 (577)
T 2ymu_A 530 KTVKLWNRNGQLLQTLTGHSS--SVWGVAFSPDGQTIASASSDK 571 (577)
T ss_dssp SEEEEECTTSCEEEEEECCSS--CEEEEEECTTSSCEEEEETTS
T ss_pred CEEEEEeCCCCEEEEEcCCCC--CEEEEEEcCCCCEEEEEeCCC
Confidence 467788865443333322111 11122222 677777788765
No 320
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=83.10 E-value=18 Score=40.44 Aligned_cols=151 Identities=7% Similarity=-0.088 Sum_probs=75.6
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcc------
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRC------ 435 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~------ 435 (712)
..++.+|..+++...+........+.. ..+.. +++.++++.. ..++.+|..+++...+........
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~-~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~ 163 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQ-YAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRVVSTGKEGVIYNGLS 163 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCS-BCCBCSSTTCEEEEET------TEEEEESSSSSCCEEEECCCBTTTEEEEEC
T ss_pred eeEEEEECCCCceEeccCCcccccccc-ccEECCCCCEEEEEEC------CeEEEEECCCCceEEEecCCCCCceECccc
Confidence 678899988877655432211111111 11111 4544455442 368888888877665543321110
Q ss_pred -----------eeEEE-EECCeEEEEcccCCC-----------------------------CCCceeEEeecCCCce-EE
Q psy14726 436 -----------YVSTA-VHHDVIYAMGGYNGQ-----------------------------RRQNSVEKYNYTENQW-SL 473 (712)
Q Consensus 436 -----------~~~~~-~~~~~iyv~GG~~~~-----------------------------~~~~~v~~yd~~~~~W-~~ 473 (712)
..+.+ .-+|+.++++..++. ....+++++|..+.+- ..
T Consensus 164 ~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~ 243 (723)
T 1xfd_A 164 DWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLE 243 (723)
T ss_dssp CHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEE
T ss_pred ceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEE
Confidence 01222 235665555443211 1123788899888763 44
Q ss_pred cccCCcc---ccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEe
Q psy14726 474 IAPMNVE---RSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI 521 (712)
Q Consensus 474 ~~~~p~~---r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 521 (712)
+...... ......+.+ +|++++.....+ .....++.+|..+++...+
T Consensus 244 l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 244 MMPPDDPRMREYYITMVKWATSTKVAVTWLNRA-QNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp CCCCCCGGGSSEEEEEEEESSSSEEEEEEEETT-SCEEEEEEEETTTCCEEEE
T ss_pred eeCCccCCCccceeEEEEEeCCCeEEEEEEcCC-CCeEEEEEEeCCCCcceEE
Confidence 4321111 111122223 777665553322 2235788999988876554
No 321
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=80.96 E-value=23 Score=33.15 Aligned_cols=134 Identities=15% Similarity=0.144 Sum_probs=72.7
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcE--EEe----CCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCC
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVW--KEI----APMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTEN 469 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W--~~~----~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 469 (712)
++.+|+|=| +.+|+++.....+ ..+ +.+|. .-. ++...++++|+|-| +.+|+|+..++
T Consensus 28 ~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP~-~ID-AA~~~~~~~yfFkG-------~~yw~~~~~~~ 91 (219)
T 1hxn_A 28 HGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPS-TVD-AAFSWEDKLYLIQD-------TKVYVFLTKGG 91 (219)
T ss_dssp TSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSCS-SCS-EEEEETTEEEEEET-------TEEEEEECSSS
T ss_pred CCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCCC-Ccc-EEEEECCcEEEecC-------CEEEEEeCCCC
Confidence 788999977 3466766543221 111 12332 122 33345899999977 57899986532
Q ss_pred -ce-----EEcc---cCCcc--ccceeEEE-E--CCEEEEEcccCCCCccCceEEeeCCC---CeeEEeCCCCCCCcceE
Q psy14726 470 -QW-----SLIA---PMNVE--RSDASATT-L--QGKIYITGGFNGHNCLNSCEVYDPEC---NQWTLIEPMRHRRSGVS 532 (712)
Q Consensus 470 -~W-----~~~~---~~p~~--r~~~~~~~-~--~~~iyv~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~p~~r~~~~ 532 (712)
+= ..+. .+|.. ...--+|. . ++++|++-| +..++||..+ ..|...+.+|. ... +
T Consensus 92 ~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~P~~i~~~~~g~p~-~vd-A 162 (219)
T 1hxn_A 92 YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELPWPHE-KVD-G 162 (219)
T ss_dssp CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEECCSCS-CCS-E
T ss_pred ceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCCCceEhhhcCCCCCC-CcC-E
Confidence 11 1111 13322 11223333 2 589999988 4578888653 23544333222 222 3
Q ss_pred EEE------------ECCEEEEEcCCCCCCccceEEEEeCC
Q psy14726 533 CIA------------YHECIYVIGGFNGMSRMCNGEKYNPV 561 (712)
Q Consensus 533 ~~~------------~~~~iyv~GG~~~~~~~~~v~~yd~~ 561 (712)
+.. .++.+|.+-| +.-++||..
T Consensus 163 a~~~~~~~~~~~~~~~~~~~YFFkg-------~~y~r~~~~ 196 (219)
T 1hxn_A 163 ALCMEKPLGPNSCSTSGPNLYLIHG-------PNLYCYRHV 196 (219)
T ss_dssp EEEESSCSSSCCSCSSSCEEEEEET-------TEEEEESSH
T ss_pred EEEccccccccceeccCCeEEEEEC-------CEEEEEeCC
Confidence 333 3467999987 466777764
No 322
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=80.68 E-value=1.3 Score=38.18 Aligned_cols=37 Identities=16% Similarity=0.086 Sum_probs=29.6
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHHHHh
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDV 227 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~l 227 (712)
.++.+|+..++.+|+.++++.|.+.|.+|+.+++...
T Consensus 86 ~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~~ 122 (135)
T 2yy9_A 86 ALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVGQ 122 (135)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC------
T ss_pred CCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccCC
Confidence 5788999999999999999999999999999887653
No 323
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=80.31 E-value=16 Score=40.90 Aligned_cols=196 Identities=8% Similarity=-0.124 Sum_probs=96.8
Q ss_pred eEEEEECCCCcEEEeCCCCCC---cceeEEEEECCeEEEEcccCCC----CCCceeEEeecCCCceEEcccCCccc--cc
Q psy14726 413 SCRCFNAVTKVWKEIAPMNFK---RCYVSTAVHHDVIYAMGGYNGQ----RRQNSVEKYNYTENQWSLIAPMNVER--SD 483 (712)
Q Consensus 413 ~v~~yd~~~~~W~~~~~~~~~---r~~~~~~~~~~~iyv~GG~~~~----~~~~~v~~yd~~~~~W~~~~~~p~~r--~~ 483 (712)
.++.+|..+++-..+...... ........-+|+.++++..... .....++.+|..+.+-..+....... ..
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~ 117 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQ 117 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCS
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccccc
Confidence 578888887765444322211 1122223346776666543322 12478999999988765554432111 11
Q ss_pred eeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCC-C-----------------cceEEEEECCEEEEEcC
Q psy14726 484 ASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHR-R-----------------SGVSCIAYHECIYVIGG 545 (712)
Q Consensus 484 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-r-----------------~~~~~~~~~~~iyv~GG 545 (712)
..+..-+|+..+++.. .+++.+|..+++...+...... . .......-+++.++++.
T Consensus 118 ~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 118 YAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp BCCBCSSTTCEEEEET------TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred ccEECCCCCEEEEEEC------CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 1222225554444432 3688888877766555432111 1 01111222454444433
Q ss_pred CCCC-----------------------------CccceEEEEeCCCCc-EEEcCCCCCC---ccceEEEEE--CCEEEEE
Q psy14726 546 FNGM-----------------------------SRMCNGEKYNPVTKT-WSQVPDMYNP---RSNFAIEVI--DDMIFAI 590 (712)
Q Consensus 546 ~~~~-----------------------------~~~~~v~~yd~~~~~-W~~~~~~p~~---r~~~~~~~~--~~~i~v~ 590 (712)
.++. .....++.+|..+.+ ...+...... ......+.+ +++++++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~ 271 (723)
T 1xfd_A 192 INDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVT 271 (723)
T ss_dssp EECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEE
T ss_pred ECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEE
Confidence 2110 112378899988776 3444322111 111222223 7776655
Q ss_pred cccCCCceeeeEEEEECCCCeEEEc
Q psy14726 591 GGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 591 GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
....+ .....++++|+.+++...+
T Consensus 272 ~~~~~-~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 272 WLNRA-QNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEETT-SCEEEEEEEETTTCCEEEE
T ss_pred EEcCC-CCeEEEEEEeCCCCcceEE
Confidence 54332 2235789999988776543
No 324
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=80.29 E-value=66 Score=36.33 Aligned_cols=199 Identities=8% Similarity=-0.052 Sum_probs=97.9
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCC-cEEEeCCCCCCcceeEEE-EECC-eEEEEcccCCCCCCceeEEeecCCCce-
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTK-VWKEIAPMNFKRCYVSTA-VHHD-VIYAMGGYNGQRRQNSVEKYNYTENQW- 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~~~~r~~~~~~-~~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W- 471 (712)
+++.++++-..++.....++.+|..++ +. ++. .......+.+ .-+| .|+.. -.........+++.+..+..-
T Consensus 185 DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~-~~~~~~~~~~WspDg~~l~y~-~~d~~~~~~~v~~~~lgt~~~~ 260 (751)
T 2xe4_A 185 EHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IAD-KVSGTNGEIVWGPDHTSLFYV-TKDETLRENKVWRHVMGKLQSE 260 (751)
T ss_dssp TTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCC-CEEEECSCCEECSSTTEEEEE-EECTTCCEEEEEEEETTSCGGG
T ss_pred CCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCc-cccCceeeEEEecCCCEEEEE-EECCCCCCCEEEEEECCCCchh
Confidence 455555544333333456999999987 62 111 0011111122 2244 34333 222222234788888776531
Q ss_pred -EEcccCCccccceeEEEE--CCE-EEEEcccCCCCccCceEEeeCCCC--ee--EEeCCCCCCCcceEEE-EECCEEEE
Q psy14726 472 -SLIAPMNVERSDASATTL--QGK-IYITGGFNGHNCLNSCEVYDPECN--QW--TLIEPMRHRRSGVSCI-AYHECIYV 542 (712)
Q Consensus 472 -~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~--~W--~~~~~~p~~r~~~~~~-~~~~~iyv 542 (712)
..+-.-+..... ....+ +|+ |++..... ..+.++.+|..+. .+ +.+.+-... ..+... ..++.||+
T Consensus 261 ~~lv~~~~~~~~~-~~~~~SpDg~~l~~~~~~~---~~~~l~~~d~~~~~~~~~~~~l~~~~~~-~~~s~~~~~g~~l~~ 335 (751)
T 2xe4_A 261 DVCLYEEHNPLFS-AFMYKAADTNTLCIGSQSP---ETAEVHLLDLRKGNAHNTLEIVRPREKG-VRYDVQMHGTSHLVI 335 (751)
T ss_dssp CEEEEECCCTTCE-EEEEECTTSSEEEEEEECS---SCEEEEEEESSSCTTCCCEEESSCCCTT-CCEEEEEETTTEEEE
T ss_pred cEEEEecCCCceE-EEEEECCCCCEEEEEecCC---CCceEEEEECCCCCCCceeEEeecCCCC-ceEEEeeeeCCEEEE
Confidence 112111212222 22222 454 44443322 2467899998875 56 655432211 112222 23788888
Q ss_pred EcCCCCCCccceEEEEeCCC-CcEEE-cCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEEC
Q psy14726 543 IGGFNGMSRMCNGEKYNPVT-KTWSQ-VPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDE 607 (712)
Q Consensus 543 ~GG~~~~~~~~~v~~yd~~~-~~W~~-~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 607 (712)
..-.+ ......++.+|..+ ..|+. +-.........+....++.|++..-.++ ...++++|+
T Consensus 336 ~t~~~-~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g---~~~l~~~dl 398 (751)
T 2xe4_A 336 LTNEG-GAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAG---LTRIWTMMA 398 (751)
T ss_dssp EECTT-TCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETT---EEEEEEEEC
T ss_pred EeCCC-CCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCC---EEEEEEEec
Confidence 86543 12245889999876 67876 4222112222334445788887765544 346888886
No 325
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=78.20 E-value=3.1 Score=35.19 Aligned_cols=33 Identities=12% Similarity=0.084 Sum_probs=30.0
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRN 223 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 223 (712)
.++.+|+..++.+|+.++++.|.+.|.+||.++
T Consensus 94 ~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 94 NLREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 567899999999999999999999999998753
No 326
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=78.14 E-value=63 Score=32.84 Aligned_cols=124 Identities=15% Similarity=0.207 Sum_probs=74.9
Q ss_pred CcEE--EeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEee-------cCCCceEEccc-CCccccceeEEEECC
Q psy14726 422 KVWK--EIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYN-------YTENQWSLIAP-MNVERSDASATTLQG 491 (712)
Q Consensus 422 ~~W~--~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd-------~~~~~W~~~~~-~p~~r~~~~~~~~~~ 491 (712)
..|+ .++..|..-.-|+.+.+++.-|++|=.++.-....+-.+- |..-.=+.++. ....-+-.+.-.++|
T Consensus 270 spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyYdg 349 (670)
T 3ju4_A 270 SPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYYDG 349 (670)
T ss_dssp SCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEETT
T ss_pred CCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhhhCC
Confidence 3454 3455566667799999999999998766554433332221 11111122322 222223345556799
Q ss_pred EEEEEc-ccCCCCccCceEEeeCCCCeeEEeC-CCCCCCcceEEEEECCEEEEEcC
Q psy14726 492 KIYITG-GFNGHNCLNSCEVYDPECNQWTLIE-PMRHRRSGVSCIAYHECIYVIGG 545 (712)
Q Consensus 492 ~iyv~G-G~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG 545 (712)
.+|++- |..+...-..+.+-+..-..|+.+. +-..-....-.+.+++.||+||-
T Consensus 350 vLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgs 405 (670)
T 3ju4_A 350 VLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGS 405 (670)
T ss_dssp EEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEE
T ss_pred EEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEec
Confidence 999975 4444455577888888888899886 22222233445778999999996
No 327
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=77.97 E-value=66 Score=33.02 Aligned_cols=215 Identities=9% Similarity=-0.037 Sum_probs=118.0
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCC----cEEEeCCCCCCcce
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTK----VWKEIAPMNFKRCY 436 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~----~W~~~~~~~~~r~~ 436 (712)
..|..+|.....+..+. +......++++. ++.||+.--. ...++++++... ....+.... ...-
T Consensus 92 ~~I~~i~l~~~~~~~~~----~~~~~~~~l~~d~~~~~lywsD~~-----~~~I~~~~~~g~~~~~~~~~~~~~~-~~~p 161 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLI----PNLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRD-IQAP 161 (400)
T ss_dssp TEEEEECTTSCSCEEEE----CSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEEC------CCCEEEECSS-CSCE
T ss_pred ceeEEEccCCcceeEec----cccCcceEEeeeeccCceEEEecC-----CCeEEEEEcccCCCCCcceEEEeCC-CCCc
Confidence 45777787777666542 122344556655 6889987432 256888888652 222222111 1122
Q ss_pred eEEEE--ECCeEEEEcccCCCCCCceeEEeecCCCceEEccc--CCccccceeEEEE--CCEEEEEcccCCCCccCceEE
Q psy14726 437 VSTAV--HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP--MNVERSDASATTL--QGKIYITGGFNGHNCLNSCEV 510 (712)
Q Consensus 437 ~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~--~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~ 510 (712)
.++++ .+++||+.-.. ...++++|+....-..+.. +..| .+.++- ++.||+.--.. ...+++
T Consensus 162 ~glavD~~~~~lY~~d~~-----~~~I~~~~~~g~~~~~l~~~~~~~P---~~iavdp~~g~ly~td~~~----~~~I~~ 229 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT----PAKIKK 229 (400)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEECTTTCSEEEEEECSSCCE---EEEEEETTTTEEEEEECSS----SCCEEE
T ss_pred ccEEEEecCCceEEEECC-----CCeEEEEeCCCCceEEEEeCCCCCc---ceEEEecccCeEEEEeCCC----CCEEEE
Confidence 34444 47899997432 3578999988776554432 2222 123332 68899875211 246888
Q ss_pred eeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEc-CCCCCCccceEEEEECCEE
Q psy14726 511 YDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV-PDMYNPRSNFAIEVIDDMI 587 (712)
Q Consensus 511 yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~i 587 (712)
+++....=+.+..-.. ..-.++++- +++||+.-.. ...|+++|.....-..+ .....-....++++.++.|
T Consensus 230 ~~~dG~~~~~~~~~~l-~~P~glavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~l 303 (400)
T 3p5b_L 230 GGLNGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKV 303 (400)
T ss_dssp EETTSCSCEEEECSSC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEE
T ss_pred EeCCCCccEEEEECCC-CceEEEEEEeCCCEEEEEECC-----CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEE
Confidence 9887543333321110 111233333 6899998432 46899999875433333 2111112345777789999
Q ss_pred EEEcccCCCceeeeEEEEECCCC
Q psy14726 588 FAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 588 ~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
|+.--. ...|+.+|..++
T Consensus 304 ywtd~~-----~~~V~~~~~~~G 321 (400)
T 3p5b_L 304 FWTDII-----NEAIFSANRLTG 321 (400)
T ss_dssp EEEESS-----SCSEEEEESSSC
T ss_pred EEecCC-----CCeEEEEEcCCC
Confidence 998522 235888886554
No 328
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=77.72 E-value=71 Score=33.22 Aligned_cols=114 Identities=8% Similarity=-0.083 Sum_probs=61.5
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-E-CCeEEEEcccCC----CCCCceeEEeecCCCc
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-H-HDVIYAMGGYNG----QRRQNSVEKYNYTENQ 470 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~-~~~iyv~GG~~~----~~~~~~v~~yd~~~~~ 470 (712)
..+||.-....... +.+..+|+.+++-... ++..... .+++ - +..+||.--... ....+.+.++|+.+.+
T Consensus 85 ~~vyV~n~~~~~~~-~~VsVID~~t~~vv~~--I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 85 RRVYIQDPAHFAAI-TQQFVIDGSTGRILGM--TDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp TEEEEEECTTTCSS-EEEEEEETTTTEEEEE--EEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CEEEEECCCcCCCC-CeEEEEECCCCEEEEE--EECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 56787765321111 7899999999875422 2222222 3333 3 347888631100 0123679999999987
Q ss_pred eEEcccCC-ccc-----cceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCee
Q psy14726 471 WSLIAPMN-VER-----SDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQW 518 (712)
Q Consensus 471 W~~~~~~p-~~r-----~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 518 (712)
-..--+++ .+| .-+.++.- +.++||..-. ..+.|.++|+.+++-
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----~~~~VsVID~~t~kv 212 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----PAPAVGVVDLEGKTF 212 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----SSCEEEEEETTTTEE
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----CCCeEEEEECCCCeE
Confidence 43221222 111 12233332 4578886421 136799999988764
No 329
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=77.69 E-value=41 Score=33.74 Aligned_cols=195 Identities=10% Similarity=0.021 Sum_probs=84.8
Q ss_pred EEEeecCCCCccceE--EEEECCCCcEEEeCCCC--C-CcceeEEEEECCe-EEEEcccCCCCCCceeEEeecC-CCceE
Q psy14726 400 YVIGGFDGNEYYNSC--RCFNAVTKVWKEIAPMN--F-KRCYVSTAVHHDV-IYAMGGYNGQRRQNSVEKYNYT-ENQWS 472 (712)
Q Consensus 400 yv~GG~~~~~~~~~v--~~yd~~~~~W~~~~~~~--~-~r~~~~~~~~~~~-iyv~GG~~~~~~~~~v~~yd~~-~~~W~ 472 (712)
+++|++... ..+ +.+|+.+++...+...+ . ....+.+..-+++ ||+.+. . .+..||.. +.+..
T Consensus 5 ~~vg~~~~~---~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~-~------~v~~~~~~~~g~~~ 74 (365)
T 1jof_A 5 LMIGTWTPP---GAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-K------KWSSFAVKSPTEIV 74 (365)
T ss_dssp EEEEESSSS---CEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-T------EEEEEEEEETTEEE
T ss_pred EEEEEccCC---CcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc-c------eEEEEEECCCCCEE
Confidence 345665432 234 45677888887654321 1 1222222233554 665432 1 68888875 55544
Q ss_pred EcccCCc-cccceeEEEECCE-EEEEcccCCC-----C----ccCceEEeeCCC-CeeEE-eCCC--CCCCcceEEEEE-
Q psy14726 473 LIAPMNV-ERSDASATTLQGK-IYITGGFNGH-----N----CLNSCEVYDPEC-NQWTL-IEPM--RHRRSGVSCIAY- 536 (712)
Q Consensus 473 ~~~~~p~-~r~~~~~~~~~~~-iyv~GG~~~~-----~----~~~~v~~yd~~~-~~W~~-~~~~--p~~r~~~~~~~~- 536 (712)
.+...+. ....+.+..-+|+ +|++.+..+. . ...++..|+... ++... +... .....-++++..
T Consensus 75 ~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp 154 (365)
T 1jof_A 75 HEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP 154 (365)
T ss_dssp EEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT
T ss_pred EeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECC
Confidence 3322111 1111222222566 3443221000 0 123466777653 33321 1111 111223333333
Q ss_pred CC-EEEEEcCCCCCCccceEEEEeCC-CCcEEEcCCC--CC-CccceEEEEE-CC-EEEEEcccCCCceeeeEEEEECCC
Q psy14726 537 HE-CIYVIGGFNGMSRMCNGEKYNPV-TKTWSQVPDM--YN-PRSNFAIEVI-DD-MIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 537 ~~-~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~--p~-~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
++ .+|+.... .+.+..||.. +++...+... +. ...-..++.. ++ .+|+.+..++ .-.++.+|+.+
T Consensus 155 dG~~l~~~~~~-----~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~---~v~v~~~~~~~ 226 (365)
T 1jof_A 155 TETYLYSADLT-----ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGN---RICEYVIDPAT 226 (365)
T ss_dssp TSSEEEEEETT-----TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTT---EEEEEEECTTT
T ss_pred CCCEEEEEcCC-----CCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCC---eEEEEEEeCCC
Confidence 44 57665311 2578899987 6766544322 11 1111222322 44 5666543222 12345556656
Q ss_pred CeE
Q psy14726 610 DEW 612 (712)
Q Consensus 610 ~~W 612 (712)
++.
T Consensus 227 g~~ 229 (365)
T 1jof_A 227 HMP 229 (365)
T ss_dssp CCE
T ss_pred CcE
Confidence 664
No 330
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=77.59 E-value=1e+02 Score=35.00 Aligned_cols=191 Identities=12% Similarity=-0.015 Sum_probs=104.6
Q ss_pred ceEEEEE--CCEEEEEeecCCCCccceEEEEECCCC----cEEE-eC-CCCCCcceeEEEE--ECCeEEEEcccCCCCCC
Q psy14726 389 YHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTK----VWKE-IA-PMNFKRCYVSTAV--HHDVIYAMGGYNGQRRQ 458 (712)
Q Consensus 389 ~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~----~W~~-~~-~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~ 458 (712)
..++++. ++.||+.-.. ...++++++... .... +. .+..| .++++ .+++||+.-. ..
T Consensus 426 ~~gl~~d~~~~~lY~sD~~-----~~~I~~~~l~g~~~~~~~~~vi~~~l~~P---~GLAvD~~~~~LY~tD~-----~~ 492 (791)
T 3m0c_C 426 VVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSNIYWTDS-----VL 492 (791)
T ss_dssp EEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCSCC---CEEEEETTTTEEEEEET-----TT
T ss_pred eEEEeecccCCeeEEeecc-----ceeEEEEeccCCCCCcceeEEEecCCCCc---ceeeeeecCCcEEEEec-----CC
Confidence 3455554 6789888542 246888887642 2222 22 22222 23444 4779999743 23
Q ss_pred ceeEEeecCCCceEEcccCCccccceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcce-EEE
Q psy14726 459 NSVEKYNYTENQWSLIAPMNVERSDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGV-SCI 534 (712)
Q Consensus 459 ~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~-~~~ 534 (712)
+.|+++++....-..+..- ........++ ++.||+.--. ....|+++++....-+.+..- ..... +++
T Consensus 493 ~~I~v~~ldG~~~~~l~~~--~l~~P~gIaVDp~~g~LYwtD~g----~~~~I~~~~~dG~~~~~lv~~--~l~~P~GLa 564 (791)
T 3m0c_C 493 GTVSVADTKGVKRKTLFRE--NGSKPRAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVDIYSLVTE--NIQWPNGIT 564 (791)
T ss_dssp TEEEEEETTSSSEEEEEEC--TTCCEEEEEEETTTTEEEEEECS----SSCEEEEEETTSCCEEEEECS--SCSCEEEEE
T ss_pred CeEEEEeCCCCeEEEEEeC--CCCCcceEEEecCCCCEEEecCC----CCCeEEEEecCCCceEEEEeC--CCCCceEEE
Confidence 6799999887665555321 1112233333 5899997521 125688998876544433221 11222 233
Q ss_pred EE--CCEEEEEcCCCCCCccceEEEEeCCCCc-EEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 535 AY--HECIYVIGGFNGMSRMCNGEKYNPVTKT-WSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 535 ~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
+- +++||+.-.. ...|+++|+.... ...+.....-....++++.+++||+.-..+ ..|+.+|..++
T Consensus 565 vD~~~~~LYwaD~~-----~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~-----~~I~~~dk~tG 633 (791)
T 3m0c_C 565 LDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN-----EAIFSANRLTG 633 (791)
T ss_dssp EETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTT-----TEEEEEETTTC
T ss_pred EecCCCeEEEEeCC-----CCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCC-----CEEEEEeCCCC
Confidence 32 6899998532 4689999986543 333322111123457777899999985332 35677775443
No 331
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=77.41 E-value=5.5 Score=35.27 Aligned_cols=76 Identities=11% Similarity=0.069 Sum_probs=53.5
Q ss_pred cChhhHHHHHHHhhhcC---------------hHHHHHHHHHhhcccCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHH
Q psy14726 160 ITEDNVASLLLATDFFC---------------MSKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNF 224 (712)
Q Consensus 160 i~~~~~~~ll~~A~~~~---------------i~~L~~~c~~~l~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f 224 (712)
++...+..++..+.... -..+.+...+|+ .++.++++.++..|..+++..|.+.|.++++..+
T Consensus 49 V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~--~id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i 126 (159)
T 2ast_A 49 VNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL--KVDQGTLFELILAANYLDIKGLLDVTCKTVANMI 126 (159)
T ss_dssp SCHHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHT--CSCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHH--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 34455666666665544 122334555566 4899999999999999999999999999987664
Q ss_pred HHhhcCccccccCCHHHHHhhcc
Q psy14726 225 VDVARESEEIVFISEQELEEIIS 247 (712)
Q Consensus 225 ~~l~~~~~~f~~l~~~~l~~ll~ 247 (712)
.. -+++++.+++.
T Consensus 127 ~g----------kt~eeir~~f~ 139 (159)
T 2ast_A 127 KG----------KTPEEIRKTFN 139 (159)
T ss_dssp SS----------CCHHHHHHHTT
T ss_pred cC----------CCHHHHHHHcC
Confidence 32 35677777765
No 332
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=77.07 E-value=3.5 Score=34.16 Aligned_cols=31 Identities=6% Similarity=-0.195 Sum_probs=28.8
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYIL 221 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~ 221 (712)
.++.+|+..++.+|+.++++.|.+.|.+|+.
T Consensus 85 ~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 85 NLDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 5778999999999999999999999999975
No 333
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=76.36 E-value=5.9 Score=33.05 Aligned_cols=33 Identities=15% Similarity=-0.035 Sum_probs=30.1
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRN 223 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 223 (712)
.++.+|+..++.+|+.++++.|.+.|.+|+.+.
T Consensus 88 ~~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 88 QAKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 577899999999999999999999999998753
No 334
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=76.27 E-value=2.7 Score=35.13 Aligned_cols=33 Identities=18% Similarity=0.134 Sum_probs=28.4
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRN 223 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 223 (712)
.++.+|+..++.+|+.++++.|.+.|.+|+.++
T Consensus 85 ~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 85 ALTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred ccCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 577899999999999999999999999998765
No 335
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=76.05 E-value=1.1e+02 Score=34.47 Aligned_cols=249 Identities=15% Similarity=0.151 Sum_probs=130.9
Q ss_pred CCcEEEcccCCCCCCCcceEEEEE---CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCc----cee-EEEEE-
Q psy14726 372 ADRWVKIEQVDPMGPRAYHGTAVI---GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKR----CYV-STAVH- 442 (712)
Q Consensus 372 ~~~W~~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r----~~~-~~~~~- 442 (712)
...|..+.... ...|. .++++. .+.+|+.. .. ..+++.+-...+|+.+.+.+... ... ++++-
T Consensus 10 ~~~w~~~~~~~-~~g~i-~~i~~~p~~~~~~~~~~-~~-----ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp 81 (737)
T 2cn3_A 10 PYKWDNVVIGG-GGGFM-PGIVFNETEKDLIYARA-AI-----GGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDP 81 (737)
T ss_dssp CEEEEEECCCS-BCSCC-CEEEECSSSTTCEEEEC-SS-----SCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECS
T ss_pred CCeeEEcccCC-Cccee-eEEEECCCCCCEEEEEe-cC-----CcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCC
Confidence 45788763221 11132 344443 25677643 11 35899999999999987643211 222 33332
Q ss_pred --CCeEEEEcccCCC--CC-CceeEEeecCCCceEEccc-CCc-----cc-cceeEEEE---CCEEEEEcccCCCCccCc
Q psy14726 443 --HDVIYAMGGYNGQ--RR-QNSVEKYNYTENQWSLIAP-MNV-----ER-SDASATTL---QGKIYITGGFNGHNCLNS 507 (712)
Q Consensus 443 --~~~iyv~GG~~~~--~~-~~~v~~yd~~~~~W~~~~~-~p~-----~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~ 507 (712)
.+.||+..|.... .. ...+++=.-.-.+|+.+.. .+. .+ ..+.+++- .+.||+... .+ ..
T Consensus 82 ~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~-~g----~g 156 (737)
T 2cn3_A 82 VDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR-CG----NG 156 (737)
T ss_dssp SSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS-TT----CC
T ss_pred CCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec-cC----Cc
Confidence 3589987653111 11 1335555455679998753 111 12 12344332 256777431 11 23
Q ss_pred eEEeeCCCCeeEEeCCCCCCC--------------cceEEEEEC----------CEEEEEcCCCCCCccceEEEEeCCCC
Q psy14726 508 CEVYDPECNQWTLIEPMRHRR--------------SGVSCIAYH----------ECIYVIGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 508 v~~yd~~~~~W~~~~~~p~~r--------------~~~~~~~~~----------~~iyv~GG~~~~~~~~~v~~yd~~~~ 563 (712)
+++=+-.-.+|+.+..+|... .+...+.++ +.||+.-+..+ ..+++=.-.-.
T Consensus 157 l~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~----~~v~~S~DgG~ 232 (737)
T 2cn3_A 157 LWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKN----ESIYRSTDGGV 232 (737)
T ss_dssp EEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSS----CCEEEESSTTS
T ss_pred EEEeCCCCcceecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCC----ccEEEEcCCCC
Confidence 444444456799988665321 112223332 26777532111 23444333456
Q ss_pred cEEEcCCCCCCccceEEEEE-CCEEEEEcccCC----CceeeeEEEEECCCCeEEEccCCCCc----ccceEEEEEc---
Q psy14726 564 TWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNG----VTTIYHVECYDEKTDEWYEATDMNIY----RSALSACVIM--- 631 (712)
Q Consensus 564 ~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~----~~~~~~v~~yd~~~~~W~~~~~~p~~----r~~~~~~~~~--- 631 (712)
+|+.+..+|.....+.++.- ++.+|+..+... ......+++++-...+|+.+...|.. +++.+...++
T Consensus 233 tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~ 312 (737)
T 2cn3_A 233 TWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDRQN 312 (737)
T ss_dssp CCEECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEEECTTC
T ss_pred ceEECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcccccccccEEEcCCC
Confidence 89999877765444444433 788888754321 11234689999999999999776543 3444434442
Q ss_pred -CcceeE
Q psy14726 632 -GLPNVY 637 (712)
Q Consensus 632 -~~~~v~ 637 (712)
+.+|+.
T Consensus 313 ~~~ly~~ 319 (737)
T 2cn3_A 313 PDIIMVT 319 (737)
T ss_dssp TTCEEEE
T ss_pred CCEEEEE
Confidence 345554
No 336
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=76.02 E-value=35 Score=38.29 Aligned_cols=198 Identities=12% Similarity=0.079 Sum_probs=102.1
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCC----ceEEcccCCccccc-e
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTEN----QWSLIAPMNVERSD-A 484 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~----~W~~~~~~p~~r~~-~ 484 (712)
..+.++++.+.....+... .+..+++++. ++.||+.-- ....|+++++.+. .-..+ +...... .
T Consensus 386 ~~I~~id~~~~~~~~~~~~--~~~p~gla~d~~~~~Ly~sD~-----~~~~I~~~~~~g~~~~~~~~~~--i~~~~~~P~ 456 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDL-----SQRMICSTQLDRAHGVSSYDTV--ISRDIQAPD 456 (699)
T ss_dssp TC-CEECTTSCCEECCSCC--CTTCCCCEEETTTTEEEECCT-----TTTSBEEEESCCCCC-CCCCCB--CCSCC--CC
T ss_pred cceEEEeCCCCcceeeecc--CcceEEEccccccCeEEEEec-----CCCeEEEEecCCCCCCcceEEE--EeCCCCCcc
Confidence 4577888887776655332 2223444443 678998632 1256888888751 11111 1111111 2
Q ss_pred eEEE--ECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCC--CCCCCcceEEEE--ECCEEEEEcCCCCCCccceEEEE
Q psy14726 485 SATT--LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEP--MRHRRSGVSCIA--YHECIYVIGGFNGMSRMCNGEKY 558 (712)
Q Consensus 485 ~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~--~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~y 558 (712)
++++ .+++||+.-.. ...|.++++....-+.+.. +..|+ ++++ .++.||+.--. ....|+++
T Consensus 457 glavD~~~g~LY~tD~~-----~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~----~~~~I~~~ 524 (699)
T 1n7d_A 457 GLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG----TPAKIKKG 524 (699)
T ss_dssp CEECCCSSSBCEECCTT-----TSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS----SSCCEEBC
T ss_pred eEEEEeeCCcEEEEecc-----CCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC----CCCeEEEE
Confidence 2332 36789986422 3568899987765444432 23332 2222 25778876421 12578888
Q ss_pred eCCCCcEEEcC--CCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCC-CcccceEEEEEcCc
Q psy14726 559 NPVTKTWSQVP--DMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMN-IYRSALSACVIMGL 633 (712)
Q Consensus 559 d~~~~~W~~~~--~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-~~r~~~~~~~~~~~ 633 (712)
++....-+.+. .+..| .++++- +++||+.-.. ...|+++|+....-..+...+ ......+.++..+.
T Consensus 525 ~~dG~~~~~l~~~~l~~P---nGlavd~~~~~LY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~ 596 (699)
T 1n7d_A 525 GLNGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDK 596 (699)
T ss_dssp CSSSCCCCEESCSSCSSC---CCEEECTTTCCEEEEETT-----TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTE
T ss_pred eCCCCCeeEEEeCCCCCc---cEEEEeccCCEEEEEecC-----CCeEEEEccCCCceEEEEecCCcCCCceEeEEECCE
Confidence 77544333321 22222 233332 6789987432 246899998764433332211 11223455667777
Q ss_pred ceeEe
Q psy14726 634 PNVYD 638 (712)
Q Consensus 634 ~~v~~ 638 (712)
+|+..
T Consensus 597 lywtd 601 (699)
T 1n7d_A 597 VFWTD 601 (699)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 77764
No 337
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=75.79 E-value=1.1e+02 Score=34.62 Aligned_cols=197 Identities=11% Similarity=0.102 Sum_probs=106.6
Q ss_pred eEEEEECCCCcEEEeCCCCC-----CcceeEEEEEC---CeEEEEcccCCCCCCceeEEeecCCCceEEccc-CC-----
Q psy14726 413 SCRCFNAVTKVWKEIAPMNF-----KRCYVSTAVHH---DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAP-MN----- 478 (712)
Q Consensus 413 ~v~~yd~~~~~W~~~~~~~~-----~r~~~~~~~~~---~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~p----- 478 (712)
.+++-+-.-.+|+.+...+. .+.-+++++-. +.+|+..|.........+++=+-.-.+|+.+.. ++
T Consensus 38 gv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~ 117 (789)
T 1sqj_A 38 GAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGAND 117 (789)
T ss_dssp CEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTS
T ss_pred CEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccC
Confidence 47888878889999865332 22344455432 578887664221111445555556679998843 11
Q ss_pred ccc-cceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCC---CCcceEEEEE----CCEEEEEcCCC
Q psy14726 479 VER-SDASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRH---RRSGVSCIAY----HECIYVIGGFN 547 (712)
Q Consensus 479 ~~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~---~r~~~~~~~~----~~~iyv~GG~~ 547 (712)
..| ..+.+++. .+.+|+. ... ..+++=+-.-.+|+.+..+|. .-.+...+.+ .+.||+.....
T Consensus 118 ~~~~~~~~iav~p~~~~~v~~g-~~~-----~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 191 (789)
T 1sqj_A 118 MGRNNGERLAVNPFNSNEVWMG-TRT-----EGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP 191 (789)
T ss_dssp TTTTSCCCEEEETTEEEEEEEE-CSS-----SCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST
T ss_pred CCccceeEEEEcCCCCCEEEEE-ecc-----CCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC
Confidence 122 22344444 3567763 321 235554444577999986541 1123333333 24687765421
Q ss_pred CCCccceEEEEeCCCCcEEEcCCCCCCc----------------cceEEEEE--CCEEEEEcccCCC---ceeeeEEEEE
Q psy14726 548 GMSRMCNGEKYNPVTKTWSQVPDMYNPR----------------SNFAIEVI--DDMIFAIGGFNGV---TTIYHVECYD 606 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r----------------~~~~~~~~--~~~i~v~GG~~~~---~~~~~v~~yd 606 (712)
..+++=.-.-.+|+.+..+|... ..+.+++. ++.||+..+.... .....+++.+
T Consensus 192 -----~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~ 266 (789)
T 1sqj_A 192 -----QGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQN 266 (789)
T ss_dssp -----TCEEEESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEE
T ss_pred -----CeEEEEcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEe
Confidence 33444333346899987554322 11444433 7889887422110 0123588888
Q ss_pred CCCCeEEEccCCCC
Q psy14726 607 EKTDEWYEATDMNI 620 (712)
Q Consensus 607 ~~~~~W~~~~~~p~ 620 (712)
-...+|+.+...|.
T Consensus 267 DgG~tW~~~~~~~~ 280 (789)
T 1sqj_A 267 RTSGAWDDITPRVG 280 (789)
T ss_dssp TTTCCEEECCCCTT
T ss_pred CCCCceEECcCCCC
Confidence 88999999976544
No 338
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=75.46 E-value=5.1 Score=33.37 Aligned_cols=31 Identities=10% Similarity=-0.036 Sum_probs=28.8
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYIL 221 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~ 221 (712)
.++.+|+..++.+|+.++++.|.+.|.+|+.
T Consensus 87 ~i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 SLSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 5788999999999999999999999999974
No 339
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=75.45 E-value=69 Score=31.95 Aligned_cols=182 Identities=9% Similarity=-0.050 Sum_probs=85.2
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
+.+.+.||.. ..+..+|..+++-... ...+. .-.++....+.+++.. .+.+..||..+.. ..+
T Consensus 71 ~~~~~~~~~d-----~~v~iWd~~~~~~~~~--~~~~~--~v~~v~~~~~~~~~~~-------~~~i~i~d~~~~~-~~~ 133 (355)
T 3vu4_A 71 NYVAFVTGVK-----EVVHIWDDVKKQDVSR--IKVDA--PVKDLFLSREFIVVSY-------GDVISVFKFGNPW-KRI 133 (355)
T ss_dssp SEEEEECSST-----TEEEEEETTTTEEEEE--EECSS--CEEEEEECSSEEEEEE-------TTEEEEEESSTTC-CBS
T ss_pred CEEEEEECCc-----cEEEEEECCCCcEEEE--EECCC--ceEEEEEcCCEEEEEE-------cCEEEEEECCCCc-eee
Confidence 4455556532 3788899888765431 11111 1123333345554442 2468899987761 111
Q ss_pred CCCCCCcceeEEEEECCeEEEE-cccCCCCCCceeEEeecCCCc-eEE-------------cccCCccccceeEEEE--C
Q psy14726 428 APMNFKRCYVSTAVHHDVIYAM-GGYNGQRRQNSVEKYNYTENQ-WSL-------------IAPMNVERSDASATTL--Q 490 (712)
Q Consensus 428 ~~~~~~r~~~~~~~~~~~iyv~-GG~~~~~~~~~v~~yd~~~~~-W~~-------------~~~~p~~r~~~~~~~~--~ 490 (712)
..+.. ....++...+.+.+. |+.+ ..+..||..+.. +.. +..+..-...-.++.+ +
T Consensus 134 ~~~~~--~~~~~~~s~~~la~~sg~~~-----g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~ 206 (355)
T 3vu4_A 134 TDDIR--FGGVCEFSNGLLVYSNEFNL-----GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK 206 (355)
T ss_dssp SCCEE--EEEEEEEETTEEEEEESSCT-----TCEEEEECCC------------------CCEEECCCSSCEEEEEECTT
T ss_pred EEecc--CCceEEEEccEEEEeCCCcC-----cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC
Confidence 11111 111122223344333 4432 458888887643 110 1111111111223333 6
Q ss_pred CEEEEEcccCCCCccCc-eEEeeCCCCeeEEeCCCC-CCCcceEEEE-ECCEEEEEcCCCCCCccceEEEEeCCCC
Q psy14726 491 GKIYITGGFNGHNCLNS-CEVYDPECNQWTLIEPMR-HRRSGVSCIA-YHECIYVIGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 491 ~~iyv~GG~~~~~~~~~-v~~yd~~~~~W~~~~~~p-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 563 (712)
+++++.|+.++ + +..||..+.+-...-... ....-.+++. -++..++.|+.+ ..+..||....
T Consensus 207 g~~l~s~s~d~-----~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~iw~~~~~ 272 (355)
T 3vu4_A 207 SDMVATCSQDG-----TIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK-----WTLHVFEIFND 272 (355)
T ss_dssp SSEEEEEETTC-----SEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT-----CEEEEEESSCC
T ss_pred CCEEEEEeCCC-----CEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC-----CEEEEEEccCC
Confidence 78888887663 5 788898876532211100 1111122222 256777777754 56778887543
No 340
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=75.08 E-value=78 Score=32.43 Aligned_cols=199 Identities=11% Similarity=0.067 Sum_probs=108.8
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCC----ceEEcccCCcccccee
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTEN----QWSLIAPMNVERSDAS 485 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~----~W~~~~~~p~~r~~~~ 485 (712)
..+.++|+....+..+.+ ..+...++++. +++||+.--. ...++++++... ....+..-.. ..-.+
T Consensus 92 ~~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~-~~p~g 163 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDI-QAPDG 163 (400)
T ss_dssp TEEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETT-----TTEEEEEEC------CCCEEEECSSC-SCEEE
T ss_pred ceeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecC-----CCeEEEEEcccCCCCCcceEEEeCCC-CCccc
Confidence 568888888887766532 22334455554 6899997332 256888888752 2222211111 11123
Q ss_pred EEE--ECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC--CCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEe
Q psy14726 486 ATT--LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYN 559 (712)
Q Consensus 486 ~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd 559 (712)
+++ .++.||+.-.. ...++++|++...-+.+. .+..|+ ++++. ++.||+.--. ....|++++
T Consensus 164 lavD~~~~~lY~~d~~-----~~~I~~~~~~g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td~~----~~~~I~~~~ 231 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG----TPAKIKKGG 231 (400)
T ss_dssp EEEETTTTEEEEEETT-----TTEEEEECTTTCSEEEEEECSSCCEE---EEEEETTTTEEEEEECS----SSCCEEEEE
T ss_pred EEEEecCCceEEEECC-----CCeEEEEeCCCCceEEEEeCCCCCcc---eEEEecccCeEEEEeCC----CCCEEEEEe
Confidence 333 27899998643 247889998876554443 222232 33332 6889987521 125789998
Q ss_pred CCCCcEEEc-C-CCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEccCC-CCcccceEEEEEcCcc
Q psy14726 560 PVTKTWSQV-P-DMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDM-NIYRSALSACVIMGLP 634 (712)
Q Consensus 560 ~~~~~W~~~-~-~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~~~~~~ 634 (712)
+....=..+ . .+. .-.++++- +++||+.-.. .+.|+.+|++...-..+... ..-....+.++.++.+
T Consensus 232 ~dG~~~~~~~~~~l~---~P~glavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~l 303 (400)
T 3p5b_L 232 LNGVDIYSLVTENIQ---WPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKV 303 (400)
T ss_dssp TTSCSCEEEECSSCS---CEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEE
T ss_pred CCCCccEEEEECCCC---ceEEEEEEeCCCEEEEEECC-----CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEE
Confidence 875432322 1 121 12234443 7899998332 24789999876543333221 1112334666778888
Q ss_pred eeEe
Q psy14726 635 NVYD 638 (712)
Q Consensus 635 ~v~~ 638 (712)
|+..
T Consensus 304 ywtd 307 (400)
T 3p5b_L 304 FWTD 307 (400)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8874
No 341
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=74.42 E-value=1.2e+02 Score=34.18 Aligned_cols=252 Identities=8% Similarity=-0.074 Sum_probs=117.7
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCC-cEEEcccCCCCCCCcceEEEEE-CC-EEEEEeecCCCCccceEEEEECCCCcE
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRAD-RWVKIEQVDPMGPRAYHGTAVI-GY-NIYVIGGFDGNEYYNSCRCFNAVTKVW 424 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~-~W~~~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~v~~yd~~~~~W 424 (712)
+..++++-...+.....++.+|..++ +... ..+ +....+.+.. ++ .|+.. -.+.......++.++..+..-
T Consensus 186 G~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~---~~~--~~~~~~~~WspDg~~l~y~-~~d~~~~~~~v~~~~lgt~~~ 259 (751)
T 2xe4_A 186 HDLVAFSVDMSGNEVYTIEFKRISDPSQTIA---DKV--SGTNGEIVWGPDHTSLFYV-TKDETLRENKVWRHVMGKLQS 259 (751)
T ss_dssp TCEEEEEEESSSSSCEEEEEEETTCTTCCCC---CCE--EEECSCCEECSSTTEEEEE-EECTTCCEEEEEEEETTSCGG
T ss_pred CCEEEEEEeCCCCceEEEEEEECCCCCEeCC---ccc--cCceeeEEEecCCCEEEEE-EECCCCCCCEEEEEECCCCch
Confidence 34444433323333446888888776 5211 001 1111112222 33 44443 222222234788888876531
Q ss_pred --EEeCCCCCCcceeEEE-EECCe-EEEEcccCCCCCCceeEEeecCCC--ce--EEcccCCccccceeEE-EECCEEEE
Q psy14726 425 --KEIAPMNFKRCYVSTA-VHHDV-IYAMGGYNGQRRQNSVEKYNYTEN--QW--SLIAPMNVERSDASAT-TLQGKIYI 495 (712)
Q Consensus 425 --~~~~~~~~~r~~~~~~-~~~~~-iyv~GG~~~~~~~~~v~~yd~~~~--~W--~~~~~~p~~r~~~~~~-~~~~~iyv 495 (712)
..+-.-+......+.. .-+|+ |++.... ...+.++.+|..+. .+ ..+.+-... ..+... ..++.||+
T Consensus 260 ~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~---~~~~~l~~~d~~~~~~~~~~~~l~~~~~~-~~~s~~~~~g~~l~~ 335 (751)
T 2xe4_A 260 EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQS---PETAEVHLLDLRKGNAHNTLEIVRPREKG-VRYDVQMHGTSHLVI 335 (751)
T ss_dssp GCEEEEECCCTTCEEEEEECTTSSEEEEEEEC---SSCEEEEEEESSSCTTCCCEEESSCCCTT-CCEEEEEETTTEEEE
T ss_pred hcEEEEecCCCceEEEEEECCCCCEEEEEecC---CCCceEEEEECCCCCCCceeEEeecCCCC-ceEEEeeeeCCEEEE
Confidence 1111112222333322 23454 4443322 13468999998875 46 555432211 111221 22778888
Q ss_pred EcccCCCCccCceEEeeCCC-CeeEE-eCCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeC-------CCCc-E
Q psy14726 496 TGGFNGHNCLNSCEVYDPEC-NQWTL-IEPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNP-------VTKT-W 565 (712)
Q Consensus 496 ~GG~~~~~~~~~v~~yd~~~-~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~-------~~~~-W 565 (712)
..-.++ .....++.+|..+ ..|+. +-+-.....-......++.|++....++ ...++.+|+ .+.. .
T Consensus 336 ~t~~~~-a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g---~~~l~~~dl~~~~~~~~~g~~~ 411 (751)
T 2xe4_A 336 LTNEGG-AVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAG---LTRIWTMMADSQDGVFKAGTGL 411 (751)
T ss_dssp EECTTT-CTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETT---EEEEEEEECCTTTSCCCTTTCC
T ss_pred EeCCCC-CCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCC---EEEEEEEecccccccccCCccc
Confidence 865441 1235788899876 67875 4222211122233445778877764332 457888886 3443 4
Q ss_pred EEcCCCCCCccceEEE-----EEC-CEEEEEcccCCCceeeeEEEEECCCCeEEEcc
Q psy14726 566 SQVPDMYNPRSNFAIE-----VID-DMIFAIGGFNGVTTIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 566 ~~~~~~p~~r~~~~~~-----~~~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 616 (712)
..+. +|......+.. ..+ +.+++... + ...-..++.||+.+++.+.+.
T Consensus 412 ~~l~-l~~~~~~~~~~~~~~~~~~~~~l~~~~s-s-~~~P~~~~~~d~~~~~~~~l~ 465 (751)
T 2xe4_A 412 REVV-MEEPIFTVHLVESQMLEYEEPTFRMEYS-S-LATPNTWFDVSPQDHSRTAVK 465 (751)
T ss_dssp EECC-CCCSSCEEEECGGGCCCTTCSCEEEEEE-E-TTEEEEEEEECTTTCCEEEEE
T ss_pred eEEC-CCCceeEEEeccCcccCCCCCEEEEEEe-C-CCCCCEEEEEECCCCcEEEEe
Confidence 4442 22221111110 112 23333311 1 122346899999888877664
No 342
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=73.96 E-value=1.3e+02 Score=34.26 Aligned_cols=198 Identities=12% Similarity=0.056 Sum_probs=107.3
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCC----ceEEc-c-cCCccccc
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTEN----QWSLI-A-PMNVERSD 483 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~----~W~~~-~-~~p~~r~~ 483 (712)
..+..++.....+..+... .+...++++. +++||+.-.. ...|+++++... ....+ . .+..+
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~--~~~~~gl~~d~~~~~lY~sD~~-----~~~I~~~~l~g~~~~~~~~~vi~~~l~~P--- 473 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP--- 473 (791)
T ss_dssp SSEEEECTTSCCCEEEECS--CSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEECSSCSCC---
T ss_pred cceeEeeccCCcceeeecC--CCceEEEeecccCCeeEEeecc-----ceeEEEEeccCCCCCcceeEEEecCCCCc---
Confidence 3567777777766655332 2233444443 6899997442 256888887652 23333 2 12111
Q ss_pred eeEEE--ECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC--CCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEE
Q psy14726 484 ASATT--LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEK 557 (712)
Q Consensus 484 ~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~ 557 (712)
.++++ .+++||+.-.. ...|+++++....-+.+. .+..|+ ++++. ++.||+.--. ....|++
T Consensus 474 ~GLAvD~~~~~LY~tD~~-----~~~I~v~~ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~g----~~~~I~~ 541 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG----TPAKIKK 541 (791)
T ss_dssp CEEEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECS----SSCEEEE
T ss_pred ceeeeeecCCcEEEEecC-----CCeEEEEeCCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEecCC----CCCeEEE
Confidence 12333 36799998642 357899998866655543 233322 33332 5899997511 1257899
Q ss_pred EeCCCCcEEEcCCCCCCccce-EEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEc-cCCCCcccceEEEEEcCc
Q psy14726 558 YNPVTKTWSQVPDMYNPRSNF-AIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA-TDMNIYRSALSACVIMGL 633 (712)
Q Consensus 558 yd~~~~~W~~~~~~p~~r~~~-~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~ 633 (712)
+++....-..+..- ..... ++++- +++||+.=.. .+.|+++|+....=..+ ..-..-....+.++.++.
T Consensus 542 ~~~dG~~~~~lv~~--~l~~P~GLavD~~~~~LYwaD~~-----~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~ 614 (791)
T 3m0c_C 542 GGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDK 614 (791)
T ss_dssp EETTSCCEEEEECS--SCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTE
T ss_pred EecCCCceEEEEeC--CCCCceEEEEecCCCeEEEEeCC-----CCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCE
Confidence 99876544444221 11122 33333 7899998322 24789999876443333 221111223466677888
Q ss_pred ceeEe
Q psy14726 634 PNVYD 638 (712)
Q Consensus 634 ~~v~~ 638 (712)
+|+..
T Consensus 615 lYwtD 619 (791)
T 3m0c_C 615 VFWTD 619 (791)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88874
No 343
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=72.40 E-value=10 Score=32.65 Aligned_cols=80 Identities=10% Similarity=0.052 Sum_probs=53.6
Q ss_pred HHHHHHhhhhccCceec---ChhhHHHHHHHhhhcC---------------hHHHHHHHHHhhcccCChhhHHHHHHHHH
Q psy14726 144 SVMTSLIEYAYLRKLHI---TEDNVASLLLATDFFC---------------MSKAQDLCCDFIKRLTTPRNCFGILLFSR 205 (712)
Q Consensus 144 ~~f~~~l~~~Yt~~~~i---~~~~~~~ll~~A~~~~---------------i~~L~~~c~~~l~~~l~~~n~~~i~~~A~ 205 (712)
..++.+++-.-.+.+.+ +...+..+++.+.... -..+.+.-.+|+ .++.+++++++..|.
T Consensus 25 ~~ik~ml~~~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~--~vd~~~l~eLi~AAn 102 (141)
T 1fs1_B 25 VTIKTMLEDLGMDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFL--KVDQGTLFELILAAN 102 (141)
T ss_dssp HHHHHHHHHTCCSSEECTTCCHHHHHHHHHHHHHHTTCC-----------------HHHHHHT--CSCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHH--hCCHHHHHHHHHHHH
Confidence 45555554321334544 4556666777766554 223445555666 389999999999999
Q ss_pred HcccHHHHHHHHHHHHHHHH
Q psy14726 206 DHFCKKLEEWTRKYILRNFV 225 (712)
Q Consensus 206 ~~~~~~L~~~~~~~i~~~f~ 225 (712)
.+++..|.+.|.++++..+.
T Consensus 103 yL~I~~Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 103 YLDIKGLLDVTCKTVANMIK 122 (141)
T ss_dssp HHTCHHHHHHHHHHHHHHHT
T ss_pred HHhhhHHHHHHHHHHHHHHc
Confidence 99999999999999887643
No 344
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=72.18 E-value=1e+02 Score=32.33 Aligned_cols=163 Identities=8% Similarity=-0.017 Sum_probs=77.4
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCC----cEEEeC-------CCCCCcceeEEEEECCeEEEEc-ccCCCCCCceeEE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTK----VWKEIA-------PMNFKRCYVSTAVHHDVIYAMG-GYNGQRRQNSVEK 463 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~----~W~~~~-------~~~~~r~~~~~~~~~~~iyv~G-G~~~~~~~~~v~~ 463 (712)
+.++|+-|.. .+.++.+|..++ +-...- .....+-++..+.-+| |||.. |.........+..
T Consensus 95 r~~l~v~~l~-----s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 95 RRFLIVPGLR-----SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILM 168 (462)
T ss_dssp SCEEEEEBTT-----TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEE
T ss_pred CCEEEEccCC-----CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEE
Confidence 4566666653 367999998877 333221 1122233333344456 77742 2212234578999
Q ss_pred eecCCCceEEcccCCcccc----ceeEEE-ECCEEEEEc----------ccCCC----CccCceEEeeCCCCeeEEeCCC
Q psy14726 464 YNYTENQWSLIAPMNVERS----DASATT-LQGKIYITG----------GFNGH----NCLNSCEVYDPECNQWTLIEPM 524 (712)
Q Consensus 464 yd~~~~~W~~~~~~p~~r~----~~~~~~-~~~~iyv~G----------G~~~~----~~~~~v~~yd~~~~~W~~~~~~ 524 (712)
+|+.|.+=. ...+.++. .+.... -++++++.- |+... ...+.|..||..+++ .+..+
T Consensus 169 lD~~T~~v~--~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~~tI 244 (462)
T 2ece_A 169 LDHYSFEPL--GKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RIHSL 244 (462)
T ss_dssp ECTTTCCEE--EECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EEEEE
T ss_pred EECCCCeEE--EEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--EeeEE
Confidence 999876522 11111111 111211 134344443 22221 346889999998864 33323
Q ss_pred CCCCc--ceEEEEE-----CCEEEEEcCCCCCCccceEEEEeCCCCcEEEc
Q psy14726 525 RHRRS--GVSCIAY-----HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV 568 (712)
Q Consensus 525 p~~r~--~~~~~~~-----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 568 (712)
+.+.. ...-+.+ +...||..-.+.....++|+.|..+.++|+..
T Consensus 245 ~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~ 295 (462)
T 2ece_A 245 TLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAE 295 (462)
T ss_dssp ESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEE
T ss_pred ecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEE
Confidence 22211 1111111 34577765422122234555544444777654
No 345
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=71.82 E-value=52 Score=33.72 Aligned_cols=103 Identities=8% Similarity=0.123 Sum_probs=52.5
Q ss_pred CCEEEEEcccCCCCccCceEEeeCCCC--eeEEeCCCC----CCCcceEEEEE--CC-EEEEEcCCCCCCccceEEEEeC
Q psy14726 490 QGKIYITGGFNGHNCLNSCEVYDPECN--QWTLIEPMR----HRRSGVSCIAY--HE-CIYVIGGFNGMSRMCNGEKYNP 560 (712)
Q Consensus 490 ~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~p----~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~ 560 (712)
++++++.| .+ ..+..||..+. .+..+...| .......++.+ ++ .+++.|+.+ ..+..||.
T Consensus 188 ~~~~l~s~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~ 256 (447)
T 3dw8_B 188 DYETYLSA-DD-----LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK-----GTIRLCDM 256 (447)
T ss_dssp TSSEEEEE-CS-----SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT-----SCEEEEET
T ss_pred CCCEEEEe-CC-----CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC-----CeEEEEEC
Confidence 56666665 33 46888888732 233221111 11112223333 34 677777764 46889998
Q ss_pred CCCcE-----EEcCCCCCC--c-------cceEEEEE--CCEEEEEcccCCCceeeeEEEEECCC
Q psy14726 561 VTKTW-----SQVPDMYNP--R-------SNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 561 ~~~~W-----~~~~~~p~~--r-------~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
.+.+. ..+.....+ + .....+.+ ++++++.|+. + .+.+||..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~-----~v~iwd~~~ 315 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-L-----SVKVWDLNM 315 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-S-----EEEEEETTC
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-C-----eEEEEeCCC
Confidence 87653 222211110 0 02222333 5667777664 3 688899875
No 346
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=71.07 E-value=8.2 Score=32.00 Aligned_cols=30 Identities=13% Similarity=-0.021 Sum_probs=28.0
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYI 220 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i 220 (712)
.++.+|+..++.+|+.++++.|.+.|.+|+
T Consensus 90 ~~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 90 TVSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 577899999999999999999999999986
No 347
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=71.02 E-value=2.3 Score=36.72 Aligned_cols=34 Identities=12% Similarity=0.058 Sum_probs=30.9
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNF 224 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f 224 (712)
.++.+|+..++.+|+.++++.|.+.|.+||.+++
T Consensus 100 ~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l 133 (138)
T 2z8h_A 100 ILSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKF 133 (138)
T ss_dssp CCCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCC
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 5788999999999999999999999999987653
No 348
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=70.95 E-value=1.5e+02 Score=33.71 Aligned_cols=242 Identities=10% Similarity=0.099 Sum_probs=124.0
Q ss_pred eEEEEECCCCcEEEcccCCCC---CCCcceEEEEE---CCEEEEEeecCCCCccceEEEEECCCCcEEEeCC-CC-----
Q psy14726 364 FVETYDTRADRWVKIEQVDPM---GPRAYHGTAVI---GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAP-MN----- 431 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~---~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~~----- 431 (712)
.++.-+-....|..+.....+ ..+..+++++. .+.+|+..|.........+++=+-.-.+|+.+.. ++
T Consensus 38 gv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~ 117 (789)
T 1sqj_A 38 GAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGAND 117 (789)
T ss_dssp CEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTS
T ss_pred CEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccC
Confidence 356666677889985321111 12334455544 2568887664211111445555556678998743 11
Q ss_pred CCc-ceeEEEEE---CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCc---cccceeEEEE----CCEEEEEcccC
Q psy14726 432 FKR-CYVSTAVH---HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNV---ERSDASATTL----QGKIYITGGFN 500 (712)
Q Consensus 432 ~~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~---~r~~~~~~~~----~~~iyv~GG~~ 500 (712)
..| ..+.+++. .+.+|+.. .. ..+++=+-.-.+|+.+..+|. .-.+.....+ .+.||+.....
T Consensus 118 ~~~~~~~~iav~p~~~~~v~~g~-~~-----~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 191 (789)
T 1sqj_A 118 MGRNNGERLAVNPFNSNEVWMGT-RT-----EGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP 191 (789)
T ss_dssp TTTTSCCCEEEETTEEEEEEEEC-SS-----SCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST
T ss_pred CCccceeEEEEcCCCCCEEEEEe-cc-----CCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC
Confidence 112 22344443 34677633 11 335554445679999876541 1122333333 24677765321
Q ss_pred CCCccCceEEeeCCCCeeEEeCCCCCCC----------------cceEEEEE--CCEEEEEcCCCC---CCccceEEEEe
Q psy14726 501 GHNCLNSCEVYDPECNQWTLIEPMRHRR----------------SGVSCIAY--HECIYVIGGFNG---MSRMCNGEKYN 559 (712)
Q Consensus 501 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r----------------~~~~~~~~--~~~iyv~GG~~~---~~~~~~v~~yd 559 (712)
..+++=.-.-.+|+.+..+|... ..+.++.. ++.||+..+... ......+++.+
T Consensus 192 -----~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~ 266 (789)
T 1sqj_A 192 -----QGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQN 266 (789)
T ss_dssp -----TCEEEESSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEE
T ss_pred -----CeEEEEcCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEe
Confidence 23443333345799987554322 01333332 788998843110 01245788888
Q ss_pred CCCCcEEEcCCCCCC---------cc---c-eEEEEE---CCEEEEEcccCCCc-eeeeEEEEECCCCeEEEcc
Q psy14726 560 PVTKTWSQVPDMYNP---------RS---N-FAIEVI---DDMIFAIGGFNGVT-TIYHVECYDEKTDEWYEAT 616 (712)
Q Consensus 560 ~~~~~W~~~~~~p~~---------r~---~-~~~~~~---~~~i~v~GG~~~~~-~~~~v~~yd~~~~~W~~~~ 616 (712)
-.-.+|+.+...|.. .. + .++++. .+.||+.++..... ....+++=+-...+|+.+.
T Consensus 267 DgG~tW~~~~~~~~~~~p~~~~~~~~~~~g~~~lav~p~~~~~v~~~~~~~~~~~~~~~l~~S~DgG~tW~~~~ 340 (789)
T 1sqj_A 267 RTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPGPALDSIYLSTDAGATWKDVT 340 (789)
T ss_dssp TTTCCEEECCCCTTTEESCCCSSCCSCCCEEEEEEEETTEEEEEEEEEECCCSCSSCCCEEEESSTTSSEEEHH
T ss_pred CCCCceEECcCCCCccccccccccccccCceEEEEECCCCCCEEEEEEeccCCCcccccEEEecCCCCCceeCc
Confidence 888999999765431 12 2 233333 24677776532200 0123444444567898876
No 349
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=70.17 E-value=1.4e+02 Score=33.10 Aligned_cols=194 Identities=6% Similarity=-0.040 Sum_probs=90.9
Q ss_pred ceEEEEECCCCc---EEEeCCCC----CCcceeEEEE-ECCeEEEEcccCCCCCCceeEEee----cCCCceEEccc---
Q psy14726 412 NSCRCFNAVTKV---WKEIAPMN----FKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYN----YTENQWSLIAP--- 476 (712)
Q Consensus 412 ~~v~~yd~~~~~---W~~~~~~~----~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd----~~~~~W~~~~~--- 476 (712)
..++.+|..+++ |..+.... ....-..++. -++++++... +.......++.+| +.+.++..+..
T Consensus 224 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~-~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~ 302 (719)
T 1z68_A 224 VRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWL-KRVQNVSVLSICDFREDWQTWDCPKTQEHIE 302 (719)
T ss_dssp EEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEE-ESSTTEEEEEEEEECSSSSSEECCGGGEEEE
T ss_pred eEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEe-ccccCeEEEEEEcccCCCCCCceEEEEeccc
Confidence 378889988775 23332210 1111122222 3567665522 1222335789999 77777665541
Q ss_pred -CCccccc-----eeEEEECCE-EEEE-cccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcCCC-
Q psy14726 477 -MNVERSD-----ASATTLQGK-IYIT-GGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGGFN- 547 (712)
Q Consensus 477 -~p~~r~~-----~~~~~~~~~-iyv~-GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~- 547 (712)
....... ..+..-+|+ +++. +..++ ...++.+|..+++...+..-........ ..-++.||+.+...
T Consensus 303 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g---~~~l~~~~~~~~~~~~lt~~~~~v~~~~-~~d~~~i~~~~~~~~ 378 (719)
T 1z68_A 303 ESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG---YKHIHYIKDTVENAIQITSGKWEAINIF-RVTQDSLFYSSNEFE 378 (719)
T ss_dssp ECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS---CEEEEEESSCSTTCEECSCSSSCEEEEE-EECSSEEEEEESCGG
T ss_pred ccCCceEccccCCccEECCCCCeEEEEEEccCC---ceEEEEEECCCCceEecccCceEEEEEE-EEeCCEEEEEEecCC
Confidence 1111111 112222454 4443 33332 3578999998887766653222111222 22345666665430
Q ss_pred CCCccceEEEEeCCCC--cEEEcCC-CCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 548 GMSRMCNGEKYNPVTK--TWSQVPD-MYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 548 ~~~~~~~v~~yd~~~~--~W~~~~~-~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
.......++..+..++ +.+.+.. ++........+.+ +++.+++.+.+.. ...+++||..+++.
T Consensus 379 ~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~--~p~~~l~d~~~g~~ 446 (719)
T 1z68_A 379 EYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPG--IPISTLHDGRTDQE 446 (719)
T ss_dssp GCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBS--SCEEEEECSSSCCE
T ss_pred CCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCC--CCeEEEEECCCCCE
Confidence 1112346777777544 3455542 2212222222333 3443333222211 13578888877754
No 350
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=69.22 E-value=93 Score=30.80 Aligned_cols=126 Identities=8% Similarity=0.019 Sum_probs=65.8
Q ss_pred eEEEEE-CCEEEEEeec-CCCCccceEEEEECCCCcEEEeCCCC-C----CcceeEEEEE-CCeEEEEcccCCCCCCcee
Q psy14726 390 HGTAVI-GYNIYVIGGF-DGNEYYNSCRCFNAVTKVWKEIAPMN-F----KRCYVSTAVH-HDVIYAMGGYNGQRRQNSV 461 (712)
Q Consensus 390 ~~~~~~-~~~lyv~GG~-~~~~~~~~v~~yd~~~~~W~~~~~~~-~----~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v 461 (712)
.++++. ++++|+.... .++. ..++.++ +++....+... . -..-+++++- +++||++.-.........+
T Consensus 20 ~~va~~~~g~~~v~~~~~~~~~--~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 20 GNITLTPDGRLFLSLHQFYQPE--MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp EEEEECTTSCEEEEECGGGCCS--CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred ceEEECCCCCEEEEeCCCCCCc--eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 344554 6788887532 2221 4677787 55544333211 1 1223445543 4799997421100113579
Q ss_pred EEeecCCCceEEcccCCc----cccc-eeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCe-eEEe
Q psy14726 462 EKYNYTENQWSLIAPMNV----ERSD-ASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ-WTLI 521 (712)
Q Consensus 462 ~~yd~~~~~W~~~~~~p~----~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~ 521 (712)
.+||+.+++-...-.++. +... ..+++- ++.+|+..... .....+.+||+.+++ |..+
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~--~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP--DDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS--GGGCEEEEEETTTCCEEEEC
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc--CCCCeEEEEECCCCCEEEEe
Confidence 999999887432222221 1111 333443 47899974210 123578999988655 5555
No 351
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=67.59 E-value=1.3e+02 Score=31.92 Aligned_cols=210 Identities=7% Similarity=0.040 Sum_probs=101.9
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV- 441 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~- 441 (712)
.+..+|.....-..+.. . ...-.++++. ++..++.|+.+ ..+..||........+..-..+ -.+++.
T Consensus 326 ~i~~w~~~~~~~~~~~~---~-~~~v~~~~~s~~g~~l~~~~~d-----g~v~~~~~~~~~~~~~~~~~~~--v~~~~~s 394 (577)
T 2ymu_A 326 TVKLWNRNGQHLQTLTG---H-SSSVWGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLTGHSSS--VRGVAFS 394 (577)
T ss_dssp CEEEEETTSCEEEEECC---C-SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTCCEEEEEECCSSC--EEEEEEC
T ss_pred eEEEEeCCCCeeEEEeC---C-CCCEEEEEECCCCCEEEEEeCC-----CEEEEEcCCCCEEEEecCCCCC--eEEEEEC
Confidence 45667766555443211 1 1111233333 56666777643 3577788654444433221111 112222
Q ss_pred ECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeE
Q psy14726 442 HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT 519 (712)
Q Consensus 442 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 519 (712)
.+++.++.|+.+ ..+..||.....-..+.. .......+.+ +++.++.|+.++ .+..||.....-.
T Consensus 395 ~dg~~l~~~~~d-----~~v~~~~~~~~~~~~~~~---~~~~v~~~~~s~d~~~l~~~~~d~-----~v~~w~~~~~~~~ 461 (577)
T 2ymu_A 395 PDGQTIASASDD-----KTVKLWNRNGQLLQTLTG---HSSSVWGVAFSPDDQTIASASDDK-----TVKLWNRNGQLLQ 461 (577)
T ss_dssp TTSSCEEEEETT-----SEEEEECTTCCEEEEEEC---CSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTSCEEE
T ss_pred CCCCEEEEEeCC-----CEEEEEeCCCCEEEEecC---CCCCeEEEEECCCCCEEEEEcCCC-----EEEEEECCCCEEE
Confidence 356777777643 457788854433222221 1111122223 667777776553 5778887655444
Q ss_pred EeCCCCCCCcceEEE-EECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CCEEEEEcccCCCc
Q psy14726 520 LIEPMRHRRSGVSCI-AYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DDMIFAIGGFNGVT 597 (712)
Q Consensus 520 ~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~ 597 (712)
.+..... .-.+++ .-++++++.|+.+ ..+..||.....-..+..... . -.+++.. ++++++.||.++
T Consensus 462 ~~~~~~~--~v~~~~~spd~~~las~~~d-----~~i~iw~~~~~~~~~~~~h~~-~-v~~l~~s~dg~~l~s~~~dg-- 530 (577)
T 2ymu_A 462 TLTGHSS--SVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTLTGHSS-S-VRGVAFSPDGQTIASASDDK-- 530 (577)
T ss_dssp EEECCSS--CEEEEEECTTSCEEEEEETT-----SEEEEEETTSCEEEEEECCSS-C-EEEEEECTTSSCEEEEETTS--
T ss_pred EEcCCCC--CEEEEEEcCCCCEEEEEeCC-----CEEEEEcCCCCEEEEEeCCCC-C-EEEEEEcCCCCEEEEEECcC--
Confidence 4332211 111222 2267777777654 467788865433333221111 1 1122222 677788888765
Q ss_pred eeeeEEEEECCCCe
Q psy14726 598 TIYHVECYDEKTDE 611 (712)
Q Consensus 598 ~~~~v~~yd~~~~~ 611 (712)
.+.+||.....
T Consensus 531 ---~v~lwd~~~~~ 541 (577)
T 2ymu_A 531 ---TVKLWNRNGQL 541 (577)
T ss_dssp ---EEEEECTTSCE
T ss_pred ---EEEEEeCCCCE
Confidence 57788865433
No 352
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=65.59 E-value=1.2e+02 Score=30.86 Aligned_cols=71 Identities=13% Similarity=0.026 Sum_probs=42.0
Q ss_pred CCEEEEEcCC--CC--CCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CC--EEEEEcccCCCceeeeEEEEECCC
Q psy14726 537 HECIYVIGGF--NG--MSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DD--MIFAIGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 537 ~~~iyv~GG~--~~--~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~--~i~v~GG~~~~~~~~~v~~yd~~~ 609 (712)
++++|+.-+. .+ ....+.|+++|.++.+-..- .+.+....++++- ++ .+|+.-+.+ +++.+||..+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~--i~vg~~~~~lavs~D~~~~ly~tn~~~-----~~VsViD~~t 363 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK--FEMGHEIDSINVSQDEKPLLYALSTGD-----KTLYIHDAES 363 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE--EEEEEEECEEEECSSSSCEEEEEETTT-----TEEEEEETTT
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEE--EECCCCcceEEECCCCCeEEEEEcCCC-----CeEEEEECCC
Confidence 5789997421 11 22347899999988764432 2222333344443 44 467654432 3789999998
Q ss_pred CeEEE
Q psy14726 610 DEWYE 614 (712)
Q Consensus 610 ~~W~~ 614 (712)
++-..
T Consensus 364 ~k~~~ 368 (386)
T 3sjl_D 364 GEELR 368 (386)
T ss_dssp CCEEE
T ss_pred CcEEE
Confidence 87543
No 353
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=65.43 E-value=21 Score=33.53 Aligned_cols=101 Identities=10% Similarity=0.103 Sum_probs=56.8
Q ss_pred ECCEEEEEeecCCCCccceEEEEE--CCC-------------CcEEEeCCCC-CCcceeEEEE-ECCeEEEEcccCCCCC
Q psy14726 395 IGYNIYVIGGFDGNEYYNSCRCFN--AVT-------------KVWKEIAPMN-FKRCYVSTAV-HHDVIYAMGGYNGQRR 457 (712)
Q Consensus 395 ~~~~lyv~GG~~~~~~~~~v~~yd--~~~-------------~~W~~~~~~~-~~r~~~~~~~-~~~~iyv~GG~~~~~~ 457 (712)
.++.+|+|-| +.+|+|+ +.+ ..|..++... ......+... .++++|+|-|
T Consensus 71 ~~g~~~fFKg-------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG------ 137 (227)
T 3lp9_A 71 ENNEAFIFYE-------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKG------ 137 (227)
T ss_dssp STTEEEEEET-------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEET------
T ss_pred CCCEEEEEeC-------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEEC------
Confidence 4899999987 4688888 321 1122222110 1122222222 2689999987
Q ss_pred CceeEEeecCCCceEE-----cc-cCCcc------ccceeEEE--ECCEEEEEcccCCCCccCceEEeeCCCC
Q psy14726 458 QNSVEKYNYTENQWSL-----IA-PMNVE------RSDASATT--LQGKIYITGGFNGHNCLNSCEVYDPECN 516 (712)
Q Consensus 458 ~~~v~~yd~~~~~W~~-----~~-~~p~~------r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 516 (712)
+..|+||..+++-.. +. .+|.. ..-.+|.. .++++|.+-| +..|+||..++
T Consensus 138 -~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 138 -DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD-------DHYARVKVTPX 202 (227)
T ss_dssp -TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------TEEEEEECCSS
T ss_pred -CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC-------CEEEEEECCcc
Confidence 679999987654211 11 12211 11223333 2589999987 56888988776
No 354
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=65.04 E-value=1.8e+02 Score=32.57 Aligned_cols=241 Identities=12% Similarity=0.109 Sum_probs=124.7
Q ss_pred eEEEEECCCCcEEEcccCCCCCC----CcceEEEEE---CCEEEEEeecCCCC--c-cceEEEEECCCCcEEEeCCC-CC
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGP----RAYHGTAVI---GYNIYVIGGFDGNE--Y-YNSCRCFNAVTKVWKEIAPM-NF 432 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~----r~~~~~~~~---~~~lyv~GG~~~~~--~-~~~v~~yd~~~~~W~~~~~~-~~ 432 (712)
.++..+.....|..+... .... ...+++++. .+.||+..|..... . ...+++=.-.-.+|+.+... +.
T Consensus 46 gv~rS~D~G~tW~~i~~~-~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~ 124 (737)
T 2cn3_A 46 GAYRWDPSTETWIPLLDH-FQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKM 124 (737)
T ss_dssp CEEEEETTTTEEEECCTT-CCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCC
T ss_pred cEEEeCCCCCCEEECcCc-cCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCccc
Confidence 477788888999985321 1111 112233333 35788876531110 1 13455555556789887431 10
Q ss_pred -----Cc-ceeEEEEE---CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccc--------------cceeEEEE
Q psy14726 433 -----KR-CYVSTAVH---HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVER--------------SDASATTL 489 (712)
Q Consensus 433 -----~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r--------------~~~~~~~~ 489 (712)
.+ ..+.+++- .+.||+.... + ..+++=+-...+|+.+..+|... .+.....+
T Consensus 125 ~~~~~g~~~~~~l~~~p~~~~~v~~g~~~-g----~gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~ 199 (737)
T 2cn3_A 125 GGNMPGRSMGERLAIDPNDNRILYLGTRC-G----NGLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVF 199 (737)
T ss_dssp CTTSTTTTSCCCEEECSSCTTCEEEECST-T----CCEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEE
T ss_pred CCCcCcccccceEEECCCCCCEEEEeecc-C----CcEEEeCCCCcceecccCCCCCcccccCcccccccCCCCEEEEEc
Confidence 12 22344442 2577774311 0 23444444457899887665321 11222333
Q ss_pred C----------CEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CCEEEEEcCCCC----CCccce
Q psy14726 490 Q----------GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HECIYVIGGFNG----MSRMCN 554 (712)
Q Consensus 490 ~----------~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~----~~~~~~ 554 (712)
+ +.||+.-+..+ ..+++=.-.-.+|+.+..+|.....+.++.. ++.+|+..+... ......
T Consensus 200 dp~~~~~~~~~~~v~~~~~~~~----~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~ 275 (737)
T 2cn3_A 200 DKSSSTPGNPTKTIYVGVADKN----ESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQ 275 (737)
T ss_dssp CGGGSCTTSCCSCEEEEESCSS----CCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEE
T ss_pred CCCCcccCCCCCEEEEEecCCC----ccEEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCce
Confidence 2 26777432111 1244433345679999877765444444433 788998764221 113467
Q ss_pred EEEEeCCCCcEEEcCCCCCC----ccceEEEEE----CCEEEEEcccCCCceeeeEEEEECCCCeEEEc
Q psy14726 555 GEKYNPVTKTWSQVPDMYNP----RSNFAIEVI----DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA 615 (712)
Q Consensus 555 v~~yd~~~~~W~~~~~~p~~----r~~~~~~~~----~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 615 (712)
+++++-...+|+.+...|.. +.+.+...+ .+.||+.+..... .-..+++=.-.-.+|+.+
T Consensus 276 v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~~~~-~~~~l~~S~DgG~tW~~~ 343 (737)
T 2cn3_A 276 VWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSMNAWW-PDEYIFRSTDGGATWKNI 343 (737)
T ss_dssp EEEEETTTCCEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEECCCS-SCCCEEEESSTTSSCEES
T ss_pred EEEEeCCCCCEEEccCCCCCCcccccccccEEEcCCCCCEEEEEecccCC-CCccEEEeCCCCccccch
Confidence 89999999999999776542 344443444 3668877643110 001233333344577766
No 355
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=65.02 E-value=5.8 Score=34.37 Aligned_cols=30 Identities=3% Similarity=0.013 Sum_probs=27.8
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYI 220 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i 220 (712)
.++.+|+..++.+|+.++++.|.+.|.+||
T Consensus 114 ~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 114 RLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 577899999999999999999999999886
No 356
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=64.58 E-value=7.3 Score=32.47 Aligned_cols=32 Identities=16% Similarity=-0.079 Sum_probs=28.2
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILR 222 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~ 222 (712)
.++.+|+..++.+|+.+++..|.+.|.+++..
T Consensus 86 ~i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 86 ELQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp EECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred CcCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 57889999999999999999999999998764
No 357
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=63.94 E-value=2.1e+02 Score=32.94 Aligned_cols=187 Identities=11% Similarity=-0.043 Sum_probs=93.9
Q ss_pred ceEEEEeecCCCCCCceEEEEECCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEe
Q psy14726 348 EILFAIGGWSGGSPTDFVETYDTRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEI 427 (712)
Q Consensus 348 ~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 427 (712)
+.+++.|+.+ ..|..||....+-... . +....-.++++..+..++.|+.+ ..+..+|..+++-...
T Consensus 29 g~~lAsgs~D-----g~I~lw~~~~~~~~~~--~--~~~~~V~~l~fspg~~L~S~s~D-----~~v~lWd~~~~~~~~~ 94 (902)
T 2oaj_A 29 QNLLAIATVT-----GEVHIYGQQQVEVVIK--L--EDRSAIKEMRFVKGIYLVVINAK-----DTVYVLSLYSQKVLTT 94 (902)
T ss_dssp TTEEEEEETT-----SEEEEECSTTCEEEEE--C--SSCCCEEEEEEETTTEEEEEETT-----CEEEEEETTTCSEEEE
T ss_pred CCEEEEEeCC-----CEEEEEeCCCcEEEEE--c--CCCCCEEEEEEcCCCEEEEEECc-----CeEEEEECCCCcEEEE
Confidence 4466677643 3677888766554331 1 11112233444445555555533 4688899888764321
Q ss_pred CCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceEEcc--------cCCccccc-eeEEEE---CCEEE
Q psy14726 428 APMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIA--------PMNVERSD-ASATTL---QGKIY 494 (712)
Q Consensus 428 ~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--------~~p~~r~~-~~~~~~---~~~iy 494 (712)
-..+ ..-.+++. -++..++.|+.+ ..+..||..+.+-.... ..+....+ -.++.+ ++.++
T Consensus 95 ~~~~--~~V~~v~~sp~g~~l~sgs~d-----g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 95 VFVP--GKITSIDTDASLDWMLIGLQN-----GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp EECS--SCEEEEECCTTCSEEEEEETT-----SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred EcCC--CCEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 1111 11112222 245666666643 45888998877642110 01111111 112222 23566
Q ss_pred EEcccCCCCccCceEEeeCCCCeeEEeCCCC------C---------C-CcceEEEEE--CCEEEEEcCCCCCCccceEE
Q psy14726 495 ITGGFNGHNCLNSCEVYDPECNQWTLIEPMR------H---------R-RSGVSCIAY--HECIYVIGGFNGMSRMCNGE 556 (712)
Q Consensus 495 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p------~---------~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 556 (712)
++|+.+ ..+ .||..+++-...-... . . ......+.+ ++..++.|+.+ ..+.
T Consensus 168 ~~g~~d-----g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~D-----g~i~ 236 (902)
T 2oaj_A 168 LISYEY-----VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHED-----NSLV 236 (902)
T ss_dssp EEECSS-----CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETT-----CCEE
T ss_pred EEEeCC-----CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECC-----CeEE
Confidence 677654 357 8898887643221110 0 0 011222333 57777888765 4688
Q ss_pred EEeCCCCcEE
Q psy14726 557 KYNPVTKTWS 566 (712)
Q Consensus 557 ~yd~~~~~W~ 566 (712)
.||..+.+-.
T Consensus 237 lWd~~~g~~~ 246 (902)
T 2oaj_A 237 FWDANSGHMI 246 (902)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCcEE
Confidence 9999887654
No 358
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=63.63 E-value=41 Score=37.56 Aligned_cols=102 Identities=9% Similarity=-0.020 Sum_probs=52.7
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE-CCEEEEEeecCCC----CccceEEEEECCCCcE---EEeCCCCCCc
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI-GYNIYVIGGFDGN----EYYNSCRCFNAVTKVW---KEIAPMNFKR 434 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~----~~~~~v~~yd~~~~~W---~~~~~~~~~r 434 (712)
..+..+|..+++-..+............+.+.. +++.++++..... .....++.+|..+++. ..++ ..
T Consensus 36 ~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~----~~ 111 (719)
T 1z68_A 36 NNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP----RP 111 (719)
T ss_dssp SCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC----SS
T ss_pred CCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC----cc
Confidence 368889998887665421110000011233333 5555555543111 1135799999999876 3332 12
Q ss_pred ceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEc
Q psy14726 435 CYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI 474 (712)
Q Consensus 435 ~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 474 (712)
.......-+|+..+++. .++++++|..+.+-..+
T Consensus 112 ~~~~~~SPDG~~la~~~------~~~i~~~~~~~g~~~~l 145 (719)
T 1z68_A 112 IQYLCWSPVGSKLAYVY------QNNIYLKQRPGDPPFQI 145 (719)
T ss_dssp BCCEEECSSTTCEEEEE------TTEEEEESSTTSCCEEC
T ss_pred cccceECCCCCEEEEEE------CCeEEEEeCCCCCcEEE
Confidence 22233344565445442 14788888877665544
No 359
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=63.36 E-value=1.3e+02 Score=31.19 Aligned_cols=143 Identities=9% Similarity=0.034 Sum_probs=77.4
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECC-eEEEEcccCCCCCCceeEEeecCCCceE-
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHD-VIYAMGGYNGQRRQNSVEKYNYTENQWS- 472 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~- 472 (712)
++.||+.--. ..+.++|+.+++...+... ..+. ..+++ .++ .||+....++ .....+..++... .|.
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~~-~~~P-~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~~~g-~~~~ 218 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYSG-LSKV-RTICWTHEADSMIITNDQNN-NDRPNNYILTRES-GFKV 218 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEECC-CSCE-EEEEECTTSSEEEEEECCSC-TTSEEEEEEEGGG-TSCS
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEecC-CCCc-ceEEEeCCCCEEEEEeCCCC-cccceEEEEeCCC-ceee
Confidence 4678887431 6799999999888776542 2222 23333 344 4999754322 1223466666543 332
Q ss_pred --EcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE-CC-EEEEEcCC
Q psy14726 473 --LIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY-HE-CIYVIGGF 546 (712)
Q Consensus 473 --~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~ 546 (712)
.++.+ ..-+++++- ++.||+.--. ...+++||+.+..-..+...+....-..++.. ++ .||+.--.
T Consensus 219 ~~~l~~~---~~p~giavdp~~g~lyv~d~~-----~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 219 ITELTKG---QNCNGAETHPINGELYFNSWN-----AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp EEEEEEC---SSCCCEEECTTTCCEEEEETT-----TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred eeeeccC---CCceEEEEeCCCCEEEEEECC-----CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 33322 222344443 5789987532 24799999988765344323221111223332 34 49998532
Q ss_pred CCCCccceEEEEeCC
Q psy14726 547 NGMSRMCNGEKYNPV 561 (712)
Q Consensus 547 ~~~~~~~~v~~yd~~ 561 (712)
...|+++|+.
T Consensus 291 -----~~~I~~~~~d 300 (430)
T 3tc9_A 291 -----QHYILRSDYD 300 (430)
T ss_dssp -----TTEEEEEEEE
T ss_pred -----CCEEEEEeCC
Confidence 3567776654
No 360
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=63.16 E-value=1.4e+02 Score=30.53 Aligned_cols=114 Identities=11% Similarity=-0.046 Sum_probs=62.1
Q ss_pred CceEEEEeecCCCCCCceEEEEECCCCcEEE-cccCCCCCCCcceEEEEE--CCEEEEEeecCC----CCccceEEEEEC
Q psy14726 347 HEILFAIGGWSGGSPTDFVETYDTRADRWVK-IEQVDPMGPRAYHGTAVI--GYNIYVIGGFDG----NEYYNSCRCFNA 419 (712)
Q Consensus 347 ~~~i~~~GG~~~~~~~~~v~~~d~~~~~W~~-~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~----~~~~~~v~~yd~ 419 (712)
.+.+|+.-... ....+.+..+|..+++-.. ++.... .+ +++. +..+|+...+.. +...+.+..+|+
T Consensus 44 ~~~vyV~~~~~-~~~~~~V~ViD~~t~~v~~~I~vG~~-----P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 44 ARRVYVNDPAH-FAAVTQQFVIDGEAGRVIGMIDGGFL-----PN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp TTEEEEEECGG-GCSSEEEEEEETTTTEEEEEEEECSS-----CE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCEEEEEcCcc-cCCCCEEEEEECCCCeEEEEEECCCC-----Cc-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 35677754321 1123579999999887543 222222 24 4444 567888763211 112356999999
Q ss_pred CCCcEEEeCCCCC-C-----cceeEEEE-EC-CeEEEEcccCCCCCCceeEEeecCCCce
Q psy14726 420 VTKVWKEIAPMNF-K-----RCYVSTAV-HH-DVIYAMGGYNGQRRQNSVEKYNYTENQW 471 (712)
Q Consensus 420 ~~~~W~~~~~~~~-~-----r~~~~~~~-~~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W 471 (712)
.+.+-..--+.+. . ..-+.+++ -+ ..+|+.... ..+.+.++|..+++=
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~----~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS----PAPAVGVVDLEGKAF 172 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS----SSCEEEEEETTTTEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC----CCCeEEEEECCCCcE
Confidence 9988543212221 1 12223333 34 478886321 236799999888764
No 361
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=62.97 E-value=1.3e+02 Score=30.03 Aligned_cols=145 Identities=8% Similarity=0.030 Sum_probs=67.3
Q ss_pred eEEEEECC-CCcEEE-eCCC--CCCcceeEEEEE-CC-eEEEEcccCCCCCCceeEEeecC-CCceEEcccCC--ccccc
Q psy14726 413 SCRCFNAV-TKVWKE-IAPM--NFKRCYVSTAVH-HD-VIYAMGGYNGQRRQNSVEKYNYT-ENQWSLIAPMN--VERSD 483 (712)
Q Consensus 413 ~v~~yd~~-~~~W~~-~~~~--~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~p--~~r~~ 483 (712)
.+..|+.. +++... +... .....-++++.. +| .+|+.. .. .+.+.+||.. +.+...+.... ..-.+
T Consensus 120 ~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~-~~----~~~v~~~~~~~~g~~~~~~~~~~~~~g~~ 194 (365)
T 1jof_A 120 YGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD-LT----ANKLWTHRKLASGEVELVGSVDAPDPGDH 194 (365)
T ss_dssp EEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE-TT----TTEEEEEEECTTSCEEEEEEEECSSTTCC
T ss_pred eEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc-CC----CCEEEEEEECCCCCEEEeeeEecCCCCCC
Confidence 46677765 344322 2211 122233444443 45 466542 11 2578999987 67665443322 11122
Q ss_pred eeEEEE--CC-EEEEEcccCCCCccCceEE--eeCCCCeeE----EeCCCCCCC---c-------ceEEEE-E--CC-EE
Q psy14726 484 ASATTL--QG-KIYITGGFNGHNCLNSCEV--YDPECNQWT----LIEPMRHRR---S-------GVSCIA-Y--HE-CI 540 (712)
Q Consensus 484 ~~~~~~--~~-~iyv~GG~~~~~~~~~v~~--yd~~~~~W~----~~~~~p~~r---~-------~~~~~~-~--~~-~i 540 (712)
.....+ +| .+|+.+..+ +.+.+ +|..+++.. .+..+|... . ....+. + ++ .|
T Consensus 195 p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l 269 (365)
T 1jof_A 195 PRWVAMHPTGNYLYALMEAG-----NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYM 269 (365)
T ss_dssp EEEEEECTTSSEEEEEETTT-----TEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEE
T ss_pred CCEeEECCCCCEEEEEECCC-----CeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEE
Confidence 233333 45 677765322 24444 455566643 344444321 1 222333 3 44 57
Q ss_pred EEEcCCCCCCccceEEEEeCC-CCcEEE
Q psy14726 541 YVIGGFNGMSRMCNGEKYNPV-TKTWSQ 567 (712)
Q Consensus 541 yv~GG~~~~~~~~~v~~yd~~-~~~W~~ 567 (712)
|+.....+......+.+|+.. +.+...
T Consensus 270 ~v~~~~~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 270 FASSRANKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp EEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred EEECCCCCCCCCCeEEEEEECCCCCEEE
Confidence 765422111112367888875 556554
No 362
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=62.02 E-value=1.3e+02 Score=29.92 Aligned_cols=210 Identities=10% Similarity=0.079 Sum_probs=105.5
Q ss_pred ceEEEEECCCCcEEEeCCCCC------Cc-ceeEEEE----ECCeEEEEccc----C--CC--CCCceeEEeecC---CC
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNF------KR-CYVSTAV----HHDVIYAMGGY----N--GQ--RRQNSVEKYNYT---EN 469 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~------~r-~~~~~~~----~~~~iyv~GG~----~--~~--~~~~~v~~yd~~---~~ 469 (712)
..|..+|+..+.-..+ ..+. +. ...++.+ -+++|+++.-. . +. ...+.+.+||+. ++
T Consensus 35 g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg 113 (334)
T 2p9w_A 35 GRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENS 113 (334)
T ss_dssp TEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTC
T ss_pred CEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCC
Confidence 5688899986654444 2221 22 2234455 25789886211 0 11 124679999987 44
Q ss_pred --ceEE-cccCCcc-------ccc-eeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCe---eEEeCCCCCCCcc-eE
Q psy14726 470 --QWSL-IAPMNVE-------RSD-ASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQ---WTLIEPMRHRRSG-VS 532 (712)
Q Consensus 470 --~W~~-~~~~p~~-------r~~-~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~~r~~-~~ 532 (712)
.|.. ++..... +.. .--.++ +|.+||.+.... ..++++|+.... |-.-.+.+..+.+ .+
T Consensus 114 ~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~----~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nG 189 (334)
T 2p9w_A 114 KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM----PAIARVSADGKTVSTFAWESGNGGQRPGYSG 189 (334)
T ss_dssp CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS----CEEEEECTTSCCEEEEEECCCCSSSCCSCSE
T ss_pred CEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC----CeEEEEeCCCCEEeeeeecCCCcccccCcce
Confidence 3542 2221111 222 222333 689999875431 569999997553 5432322333433 35
Q ss_pred EEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCC-----CCCCccceE--EEEECCEEEEEcccCCCceeeeEE
Q psy14726 533 CIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPD-----MYNPRSNFA--IEVIDDMIFAIGGFNGVTTIYHVE 603 (712)
Q Consensus 533 ~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~-----~p~~r~~~~--~~~~~~~i~v~GG~~~~~~~~~v~ 603 (712)
++.. +..|++..+ ...+++||..+.....++. .......-+ ..-.+|++++++-.. +.++
T Consensus 190 Iv~~pdg~~Liv~~~------~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~-----~~~~ 258 (334)
T 2p9w_A 190 ITFDPHSNKLIAFGG------PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARA-----PYAI 258 (334)
T ss_dssp EEEETTTTEEEEESS------SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEET-----TEEE
T ss_pred EEEeCCCCEEEEEcC------CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCC-----CCEE
Confidence 5555 346666654 2578899987533211211 000011112 223588886664321 2345
Q ss_pred EEECCCCeEEEc---cCCCC---cccceEEEE----EcCcceeEe
Q psy14726 604 CYDEKTDEWYEA---TDMNI---YRSALSACV----IMGLPNVYD 638 (712)
Q Consensus 604 ~yd~~~~~W~~~---~~~p~---~r~~~~~~~----~~~~~~v~~ 638 (712)
.+-...+ |... +..|. .+....+++ .++.+|+..
T Consensus 259 ~l~S~Dg-W~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~ 302 (334)
T 2p9w_A 259 SFRSWDN-WKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVS 302 (334)
T ss_dssp EEECSST-TSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEE
T ss_pred EEECCCC-cceeEEeeeecCccccCceeEEEEeccccCCeEEEEe
Confidence 5555555 9765 33333 233333333 467788874
No 363
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=61.79 E-value=1.9e+02 Score=31.71 Aligned_cols=210 Identities=10% Similarity=0.025 Sum_probs=117.8
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCCcceEEEEE--CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEE
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPRAYHGTAVI--GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTA 440 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~ 440 (712)
..|...|.....-.. ..+.+.-+...++++. ++.||+.-.. ...++++++.......+...... .-.+++
T Consensus 15 ~~I~~i~l~~~~~~~--~~~~~~~~~~~~l~~d~~~~~lywtD~~-----~~~I~r~~~~g~~~~~v~~~g~~-~P~GlA 86 (628)
T 4a0p_A 15 ADIRRISLETNNNNV--AIPLTGVKEASALDFDVTDNRIYWTDIS-----LKTISRAFMNGSALEHVVEFGLD-YPEGMA 86 (628)
T ss_dssp TEEEEEESSCTTCEE--ECCCCSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCS-CCCEEE
T ss_pred CcEEEEECCCCCcce--EEEcCCCCceEEEEEECCCCEEEEEECC-----CCeEEEEECCCCCcEEEEeCCCC-CcceEE
Confidence 356677776544322 1222223344556665 6899988542 35789999887666555332211 123444
Q ss_pred E--ECCeEEEEcccCCCCCCceeEEeecCCCceEEc--ccCCccccceeEEEE--CCEEEEEc-ccCCCCccCceEEeeC
Q psy14726 441 V--HHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLI--APMNVERSDASATTL--QGKIYITG-GFNGHNCLNSCEVYDP 513 (712)
Q Consensus 441 ~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~--~~~p~~r~~~~~~~~--~~~iyv~G-G~~~~~~~~~v~~yd~ 513 (712)
+ .+++||+.-. ..+.++++++....=+.+ ..+..| .+.++- +|.||+.- |. ...+++.++
T Consensus 87 vD~~~~~LY~tD~-----~~~~I~v~~~dG~~~~~l~~~~l~~P---~~iavdp~~G~lY~tD~g~-----~~~I~r~~~ 153 (628)
T 4a0p_A 87 VDWLGKNLYWADT-----GTNRIEVSKLDGQHRQVLVWKDLDSP---RALALDPAEGFMYWTEWGG-----KPKIDRAAM 153 (628)
T ss_dssp EETTTTEEEEEET-----TTTEEEEEETTSTTCEEEECSSCCCE---EEEEEETTTTEEEEEECSS-----SCEEEEEET
T ss_pred EEeCCCEEEEEEC-----CCCEEEEEecCCCcEEEEEeCCCCCc---ccEEEccCCCeEEEeCCCC-----CCEEEEEeC
Confidence 4 5789999743 236799999876543333 223222 233333 68999975 21 357888888
Q ss_pred CCCeeEEeC-CCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcC-CCCCCccceEEEEECCEEEE
Q psy14726 514 ECNQWTLIE-PMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVP-DMYNPRSNFAIEVIDDMIFA 589 (712)
Q Consensus 514 ~~~~W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~i~v 589 (712)
....-+.+. .+..| .+.+.- +++||+.-.. .+.|+++|+....=+.+. .++ .-.++++.++.||+
T Consensus 154 dG~~~~~l~~~~~~P---~GlalD~~~~~LY~aD~~-----~~~I~~~d~dG~~~~v~~~~l~---~P~glav~~~~ly~ 222 (628)
T 4a0p_A 154 DGSERTTLVPNVGRA---NGLTIDYAKRRLYWTDLD-----TNLIESSNMLGLNREVIADDLP---HPFGLTQYQDYIYW 222 (628)
T ss_dssp TSCSCEEEECSCSSE---EEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECCS---CEEEEEEETTEEEE
T ss_pred CCCceEEEECCCCCc---ceEEEccccCEEEEEECC-----CCEEEEEcCCCCceEEeeccCC---CceEEEEECCEEEE
Confidence 766554443 22211 223332 5899998542 467899998653223332 222 33577778899998
Q ss_pred EcccCCCceeeeEEEEECCC
Q psy14726 590 IGGFNGVTTIYHVECYDEKT 609 (712)
Q Consensus 590 ~GG~~~~~~~~~v~~yd~~~ 609 (712)
.--.+ ..|+++|..+
T Consensus 223 tD~~~-----~~I~~~dk~t 237 (628)
T 4a0p_A 223 TDWSR-----RSIERANKTS 237 (628)
T ss_dssp EETTT-----TEEEEEETTT
T ss_pred ecCCC-----CEEEEEECCC
Confidence 74221 2455566443
No 364
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=61.70 E-value=2.1e+02 Score=32.20 Aligned_cols=197 Identities=13% Similarity=0.105 Sum_probs=107.2
Q ss_pred eEEEEECCCCcEEEeCC-C-----C----CCcceeEEEEE---CCeEEEEcccC-CCCCCceeEEeecCCCceEEccc-C
Q psy14726 413 SCRCFNAVTKVWKEIAP-M-----N----FKRCYVSTAVH---HDVIYAMGGYN-GQRRQNSVEKYNYTENQWSLIAP-M 477 (712)
Q Consensus 413 ~v~~yd~~~~~W~~~~~-~-----~----~~r~~~~~~~~---~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~-~ 477 (712)
.+++-+-.-.+|+.+.. + + ....-+++++- .+.+|+..|.. .......+++=+-.-.+|+.+.. .
T Consensus 44 gv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~ 123 (763)
T 3a0f_A 44 GTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPV 123 (763)
T ss_dssp CEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSS
T ss_pred cEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCCc
Confidence 47888878889998865 3 2 11222333332 36899865531 11122345554445679998852 2
Q ss_pred C-----ccccc-eeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCC---cceEEEEE----CCEEE
Q psy14726 478 N-----VERSD-ASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRR---SGVSCIAY----HECIY 541 (712)
Q Consensus 478 p-----~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r---~~~~~~~~----~~~iy 541 (712)
+ ..|.. ..+++. .+.+|+.+. . ..+++=+-.-.+|+.+..++... .....+.+ .+.+|
T Consensus 124 ~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~-~-----~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 197 (763)
T 3a0f_A 124 PMGANDMGRNGGERLAVNPHWTDELWFGSR-T-----QGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAY 197 (763)
T ss_dssp CCCTTSTTTTSBCCEEECTTSTTCEEEECS-S-----SCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEE
T ss_pred ccCccccCccccceEEECCCCCCEEEEEeC-C-----CcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEEE
Confidence 1 12321 233333 367887642 1 23554444456899998766432 22333333 24688
Q ss_pred EEcCCCCCCccceEEEEeCCCCcEEEcCCCCC--------------------CccceEEEEE-CCEEEEEcccCC---Cc
Q psy14726 542 VIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYN--------------------PRSNFAIEVI-DDMIFAIGGFNG---VT 597 (712)
Q Consensus 542 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~--------------------~r~~~~~~~~-~~~i~v~GG~~~---~~ 597 (712)
+.+...+ .+++-+-.-.+|+.+...|. +...+.++.. ++.+|+...... ..
T Consensus 198 ~~~~~~g-----~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~ 272 (763)
T 3a0f_A 198 VASHAVG-----GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGV 272 (763)
T ss_dssp EEESSTT-----CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCC
T ss_pred EEEeCCC-----eEEEECCCCCCccccCCCccccccccccccccccccccCCCCcceeEEECCCCcEEEEeccCCCCCCC
Confidence 7654221 34444434568999875552 2333343333 678888742110 00
Q ss_pred eeeeEEEEECCCCeEEEccCCCC
Q psy14726 598 TIYHVECYDEKTDEWYEATDMNI 620 (712)
Q Consensus 598 ~~~~v~~yd~~~~~W~~~~~~p~ 620 (712)
....+++.+-...+|+.+.++|.
T Consensus 273 ~~g~v~rS~D~G~tW~~~~~~~~ 295 (763)
T 3a0f_A 273 LYGEVWSYDPTNGNWKHITPSRE 295 (763)
T ss_dssp CCEEEEEEETTTTEEEECCTTSS
T ss_pred cceeEEEEeCCCCceEECCCCCC
Confidence 12468889989999999876554
No 365
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=60.82 E-value=1.4e+02 Score=30.02 Aligned_cols=115 Identities=8% Similarity=-0.116 Sum_probs=58.0
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEEC-CeEEEEcccCC---C-CCCceeEEeecCCCce
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHH-DVIYAMGGYNG---Q-RRQNSVEKYNYTENQW 471 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~-~~iyv~GG~~~---~-~~~~~v~~yd~~~~~W 471 (712)
..+|+.-+....... .+..||+.+++-. ..++.....+-...-+ ..+|+..-... . ...+.+.+||+.+.+-
T Consensus 33 ~~~yv~~~~~~~~~~-~v~v~D~~t~~~~--~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~ 109 (373)
T 2mad_H 33 RRSYINLPAHHSAII-QQWVLDAGSGSIL--GHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP 109 (373)
T ss_pred CEEEEeCCcccCCcc-EEEEEECCCCeEE--EEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE
Confidence 357776541111111 7899999987743 3344333333333334 47888742211 1 1246789999987543
Q ss_pred EEcccCC-cccc----ceeEEEE---CCEEEEEcccCCCCccCceEEeeCCCCeeE
Q psy14726 472 SLIAPMN-VERS----DASATTL---QGKIYITGGFNGHNCLNSCEVYDPECNQWT 519 (712)
Q Consensus 472 ~~~~~~p-~~r~----~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 519 (712)
..--+++ .+|. ......+ +..+|+..-. ..+.+.++| .+++-.
T Consensus 110 ~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~----~~~~v~viD-~t~~~~ 160 (373)
T 2mad_H 110 IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA----AGPAVGLVV-QGGSSD 160 (373)
T ss_pred EEEEECCCccccccCCCccceEECCCCCEEEEEecC----CCCeEEEEE-CCCCEE
Confidence 2211122 1111 1112222 4567776421 135788999 887643
No 366
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=60.62 E-value=1.5e+02 Score=30.16 Aligned_cols=130 Identities=16% Similarity=0.188 Sum_probs=80.4
Q ss_pred CCCCcEEEcccCCCCCCCcceEEEEECCEEEEEeecCCCCccceEE--EEE-----CCCCcEEEeCCCCC-CcceeEEEE
Q psy14726 370 TRADRWVKIEQVDPMGPRAYHGTAVIGYNIYVIGGFDGNEYYNSCR--CFN-----AVTKVWKEIAPMNF-KRCYVSTAV 441 (712)
Q Consensus 370 ~~~~~W~~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~v~--~yd-----~~~~~W~~~~~~~~-~r~~~~~~~ 441 (712)
.....|.....+..|....-|+.|.+++.=|++|=.++.-..+.+= .|. |..-.=+.++.--. .-...++-.
T Consensus 267 F~~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvky 346 (670)
T 3ju4_A 267 FHKSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKY 346 (670)
T ss_dssp STTSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEE
T ss_pred eccCCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhh
Confidence 4456677655666676777899999988888887655443333332 221 11111233333222 233455667
Q ss_pred ECCeEEEEc-ccCCCCCCceeEEeecCCCceEEccc-CCccccceeEEEECCEEEEEccc
Q psy14726 442 HHDVIYAMG-GYNGQRRQNSVEKYNYTENQWSLIAP-MNVERSDASATTLQGKIYITGGF 499 (712)
Q Consensus 442 ~~~~iyv~G-G~~~~~~~~~v~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~ 499 (712)
++|.+|+.- |..+...-+.+.+-+.....|+.+.- -..-.....-+.+++.||+||..
T Consensus 347 YdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 347 YDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp ETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEEC
T ss_pred hCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEecc
Confidence 899999974 33444556778899989999998842 22223334567789999999863
No 367
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=59.98 E-value=5.3 Score=35.69 Aligned_cols=35 Identities=23% Similarity=0.429 Sum_probs=31.0
Q ss_pred ecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCC
Q psy14726 159 HITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTT 193 (712)
Q Consensus 159 ~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~ 193 (712)
.++.+|+..++..|+.++++.|++.|.+|+.+++.
T Consensus 131 ~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~ 165 (172)
T 3htm_A 131 NLSVENAAEILILADLHSADQLKTQAVDFINYHAT 165 (172)
T ss_dssp TCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred hCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 36788999999999999999999999999987654
No 368
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=57.76 E-value=5.5 Score=42.95 Aligned_cols=85 Identities=8% Similarity=0.104 Sum_probs=59.1
Q ss_pred cEEEEecCCcEEeceeeeecccCHH-HHHhhcC-CCCcCCccceEEcCCCCHHHHHHHhhhhcc-CceecChh-hHHHHH
Q psy14726 94 DATIVLADNSHFPIHRNILCACSDY-FRALFTT-SLHDQEKFSLVEIPGVDASVMTSLIEYAYL-RKLHITED-NVASLL 169 (712)
Q Consensus 94 Dv~l~v~~~~~~~~Hk~vL~~~S~y-F~~mf~~-~~~e~~~~~~i~l~~~~~~~f~~~l~~~Yt-~~~~i~~~-~~~~ll 169 (712)
=|+|.| +|+.|...+..|...-.- +.+++.. ....... .+..+ |=++..|+.||+|+.+ |++.++.+ ....++
T Consensus 53 ~v~lNV-gG~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~-~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~ 129 (514)
T 2r9r_B 53 RVVINI-SGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLR-NEYFF-DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFS 129 (514)
T ss_dssp EEEEEE-TTEEEEEEHHHHTTSTTSTTTCHHHHGGGEETTT-TEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHH
T ss_pred EEEEEe-CCEEEEecHHHHhcCCCCcccccccCCcccCCCC-CCEEE-cCChHHHHHHHHHHhcCCccccCCcccHHHHH
Confidence 377888 999999999988654221 1112211 1111233 56666 5799999999999999 99877655 456788
Q ss_pred HHhhhcChHHHH
Q psy14726 170 LATDFFCMSKAQ 181 (712)
Q Consensus 170 ~~A~~~~i~~L~ 181 (712)
+-|++|+|+++.
T Consensus 130 ~E~~f~~i~~~~ 141 (514)
T 2r9r_B 130 EEIRFYELGEEA 141 (514)
T ss_dssp HHHHHTTCCHHH
T ss_pred HHHHhcCCCHHH
Confidence 999999997654
No 369
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=56.03 E-value=10 Score=32.60 Aligned_cols=34 Identities=9% Similarity=0.029 Sum_probs=27.0
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNF 224 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f 224 (712)
.++.+++..++.+|+.++++.|.+.|.+++.+++
T Consensus 90 ~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 123 (145)
T 4eoz_A 90 PNLDKMADDLLAAADKYALERLKVMCEDALCSNL 123 (145)
T ss_dssp TTGGGTHHHHHHHHHHTTCHHHHHHHHCC-----
T ss_pred CCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC
Confidence 4667899999999999999999999999988765
No 370
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=55.53 E-value=48 Score=36.35 Aligned_cols=144 Identities=13% Similarity=0.077 Sum_probs=73.4
Q ss_pred EEEEECCEEEEEeecCCCCccceEEEEECCCC-cEE--Ee----CCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeE
Q psy14726 391 GTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTK-VWK--EI----APMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVE 462 (712)
Q Consensus 391 ~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~-~W~--~~----~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~ 462 (712)
+++..++.+|+|-| +.+|+++.... ... .+ +.+|.. -..+... .++++|+|=| +.+|
T Consensus 448 Ait~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~LP~~-IDAA~~~~~~~k~yFFkG-------~~yW 512 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPEK-IDAVYEAPQEEKAVFFAG-------NEYW 512 (631)
T ss_dssp EEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTSCSS-CSBCCEETTTTEEEEEET-------TEEE
T ss_pred eeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCCCcc-ceEEEEECCCCEEEEEec-------CEEE
Confidence 44455888999977 35677765442 111 11 123321 1111111 2578999976 5788
Q ss_pred EeecCCC--ce-EEccc--CCccccceeEEE---ECCEEEEEcccCCCCccCceEEeeCCCCeeE-----EeC-C-CCCC
Q psy14726 463 KYNYTEN--QW-SLIAP--MNVERSDASATT---LQGKIYITGGFNGHNCLNSCEVYDPECNQWT-----LIE-P-MRHR 527 (712)
Q Consensus 463 ~yd~~~~--~W-~~~~~--~p~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~~-~-~p~~ 527 (712)
+|+..+- -+ ..+.. +|..-..--+|. .++++|+|-| +..++||..+++-. .+. . +..+
T Consensus 513 ry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG-------~~ywryd~~~~~vd~gYPk~i~~~w~G~p 585 (631)
T 1ck7_A 513 IYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAIP 585 (631)
T ss_dssp EEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET-------TEEEEEETTTTEECTTCCEETTTSCSSCC
T ss_pred EECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC-------CEEEEEcCCcccccCCCCcchHhhcCCCC
Confidence 8885210 01 11111 121101112222 2689999987 56889997765311 111 1 1112
Q ss_pred CcceEEEEEC--CEEEEEcCCCCCCccceEEEEeCCCC
Q psy14726 528 RSGVSCIAYH--ECIYVIGGFNGMSRMCNGEKYNPVTK 563 (712)
Q Consensus 528 r~~~~~~~~~--~~iyv~GG~~~~~~~~~v~~yd~~~~ 563 (712)
..--++...+ +++|++-| +..|+||..+.
T Consensus 586 ~~iDAAf~~~~~g~~YFFkG-------~~Ywr~d~~~~ 616 (631)
T 1ck7_A 586 DNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSL 616 (631)
T ss_dssp TTCCEEECCTTSCBCEEEET-------TEEECCBTTBT
T ss_pred CCCcEeEEEcCCCeEEEEEC-------CEEEEEeCccc
Confidence 2223444443 78999987 45677777544
No 371
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=55.34 E-value=1.8e+02 Score=29.38 Aligned_cols=83 Identities=11% Similarity=0.034 Sum_probs=48.8
Q ss_pred CCEEEEEcC-C-C-CCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CC-EEEEEcc-cCCCceeeeEEEEECCCC
Q psy14726 537 HECIYVIGG-F-N-GMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DD-MIFAIGG-FNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 537 ~~~iyv~GG-~-~-~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~i~v~GG-~~~~~~~~~v~~yd~~~~ 610 (712)
++++|+... . . .......+.++|..+.+ .+..++.+...++++.. ++ ++|+..+ .+ ++|-++|+.+
T Consensus 275 g~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~--vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~-----~~VsVID~~t- 346 (368)
T 1mda_H 275 TDGIMILTVEHSRSCLAAAENTSSVTASVGQ--TSGPISNGHDSDAIIAAQDGASDNYANSAGT-----EVLDIYDAAS- 346 (368)
T ss_dssp TTEEEEEEEECSSCTTSCEEEEEEEESSSCC--EEECCEEEEEECEEEECCSSSCEEEEEETTT-----TEEEEEESSS-
T ss_pred CCEEEEEeccccCcccccCCCEEEEECCCCe--EEEEEECCCCcceEEECCCCCEEEEEccCCC-----CeEEEEECCC-
Confidence 468998532 1 0 00001345599988764 45555555555666555 44 4777755 23 4789999876
Q ss_pred eEEEccCCCCcccceEEE
Q psy14726 611 EWYEATDMNIYRSALSAC 628 (712)
Q Consensus 611 ~W~~~~~~p~~r~~~~~~ 628 (712)
|+.+..++.++...+.+
T Consensus 347 -~kvv~~I~vg~~P~~i~ 363 (368)
T 1mda_H 347 -DQDQSSVELDKGPESLS 363 (368)
T ss_dssp -CEEEEECCCCSCCCEEE
T ss_pred -CcEEEEEECCCCCCEEE
Confidence 56666677666665543
No 372
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=54.74 E-value=52 Score=36.11 Aligned_cols=143 Identities=13% Similarity=0.125 Sum_probs=74.4
Q ss_pred EEEEECCeEEEEcccCCCCCCceeEEeecCCC-ceE--Ec----ccCCccccceeEEEE--CCEEEEEcccCCCCccCce
Q psy14726 438 STAVHHDVIYAMGGYNGQRRQNSVEKYNYTEN-QWS--LI----APMNVERSDASATTL--QGKIYITGGFNGHNCLNSC 508 (712)
Q Consensus 438 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~--~~----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v 508 (712)
+++..+|++|+|=| +.+|+++.... ... .+ +.+|. ... +|... ++++|+|-| +..
T Consensus 448 Ait~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~LP~-~ID-AA~~~~~~~k~yFFkG-------~~y 511 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KID-AVYEAPQEEKAVFFAG-------NEY 511 (631)
T ss_dssp EEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTSCS-SCS-BCCEETTTTEEEEEET-------TEE
T ss_pred eeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCCCc-cce-EEEEECCCCEEEEEec-------CEE
Confidence 45667899999977 45777765442 111 11 12332 122 22222 688999977 468
Q ss_pred EEeeCCCCe--e-EEeCC--CCCCCcceEEEE---ECCEEEEEcCCCCCCccceEEEEeCCCCcEE-----EcC-C-CCC
Q psy14726 509 EVYDPECNQ--W-TLIEP--MRHRRSGVSCIA---YHECIYVIGGFNGMSRMCNGEKYNPVTKTWS-----QVP-D-MYN 573 (712)
Q Consensus 509 ~~yd~~~~~--W-~~~~~--~p~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~~-~-~p~ 573 (712)
|+|+..+.. + ..+.. +|......-++. .++++|+|-| +..|+||..+++=. .+. . +..
T Consensus 512 Wry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG-------~~ywryd~~~~~vd~gYPk~i~~~w~G~ 584 (631)
T 1ck7_A 512 WIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAI 584 (631)
T ss_dssp EEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET-------TEEEEEETTTTEECTTCCEETTTSCSSC
T ss_pred EEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC-------CEEEEEcCCcccccCCCCcchHhhcCCC
Confidence 888752100 0 11111 221111111222 3689999987 57899998665311 111 0 111
Q ss_pred CccceEEEEEC--CEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 574 PRSNFAIEVID--DMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 574 ~r~~~~~~~~~--~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
+..--++...+ +++|++-|. ..|.||..+.
T Consensus 585 p~~iDAAf~~~~~g~~YFFkG~-------~Ywr~d~~~~ 616 (631)
T 1ck7_A 585 PDNLDAVVDLQGGGHSYFFKGA-------YYLKLENQSL 616 (631)
T ss_dssp CTTCCEEECCTTSCBCEEEETT-------EEECCBTTBT
T ss_pred CCCCcEeEEEcCCCeEEEEECC-------EEEEEeCccc
Confidence 22223444433 789998663 5688887654
No 373
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=54.63 E-value=3.9 Score=34.67 Aligned_cols=33 Identities=6% Similarity=-0.064 Sum_probs=23.8
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYILRN 223 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~ 223 (712)
.++.+|+..++.+|+.++++.|.+.|.+|+.+.
T Consensus 95 ~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 95 SMNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp ECCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred ccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 678899999999999999999999999998764
No 374
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=54.33 E-value=2.7e+02 Score=31.23 Aligned_cols=198 Identities=12% Similarity=0.098 Sum_probs=104.0
Q ss_pred eEEEEECCCCcEEEcccCC----CC----CCCcceEEEEE---CCEEEEEeecCC-CCccceEEEEECCCCcEEEeCC-C
Q psy14726 364 FVETYDTRADRWVKIEQVD----PM----GPRAYHGTAVI---GYNIYVIGGFDG-NEYYNSCRCFNAVTKVWKEIAP-M 430 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~----~~----~~r~~~~~~~~---~~~lyv~GG~~~-~~~~~~v~~yd~~~~~W~~~~~-~ 430 (712)
.++.-+-....|..+.... ++ .....+++++. .+.+|+..|... ......+++=+-.-.+|+.+.. .
T Consensus 44 gv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~ 123 (763)
T 3a0f_A 44 GTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPV 123 (763)
T ss_dssp CEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSS
T ss_pred cEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCCc
Confidence 3666666778999864311 01 11222333332 368888665311 1112345554445668988752 1
Q ss_pred C-----CCcc-eeEEEEE---CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccc---cceeEEEE----CCEEE
Q psy14726 431 N-----FKRC-YVSTAVH---HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVER---SDASATTL----QGKIY 494 (712)
Q Consensus 431 ~-----~~r~-~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r---~~~~~~~~----~~~iy 494 (712)
+ ..|. ...+++. .+.+|+.+. ...+++=+-.-.+|+.+..++... .+.....+ .+.+|
T Consensus 124 ~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~------~~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 197 (763)
T 3a0f_A 124 PMGANDMGRNGGERLAVNPHWTDELWFGSR------TQGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAY 197 (763)
T ss_dssp CCCTTSTTTTSBCCEEECTTSTTCEEEECS------SSCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEE
T ss_pred ccCccccCccccceEEECCCCCCEEEEEeC------CCcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEEE
Confidence 1 1222 1234443 367888642 123554444567999998766432 22223333 24688
Q ss_pred EEcccCCCCccCceEEeeCCCCeeEEeCCCCC--------------------CCcceEEEEE-CCEEEEEcCCC-C--CC
Q psy14726 495 ITGGFNGHNCLNSCEVYDPECNQWTLIEPMRH--------------------RRSGVSCIAY-HECIYVIGGFN-G--MS 550 (712)
Q Consensus 495 v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~--------------------~r~~~~~~~~-~~~iyv~GG~~-~--~~ 550 (712)
+.+...+ .+++=+-.-.+|+.+...|. +...+.++.. ++.+|+..... + ..
T Consensus 198 ~~~~~~g-----~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~ 272 (763)
T 3a0f_A 198 VASHAVG-----GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGV 272 (763)
T ss_dssp EEESSTT-----CEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCC
T ss_pred EEEeCCC-----eEEEECCCCCCccccCCCccccccccccccccccccccCCCCcceeEEECCCCcEEEEeccCCCCCCC
Confidence 7653221 34444334557999875552 2223333332 67888884210 0 01
Q ss_pred ccceEEEEeCCCCcEEEcCCCC
Q psy14726 551 RMCNGEKYNPVTKTWSQVPDMY 572 (712)
Q Consensus 551 ~~~~v~~yd~~~~~W~~~~~~p 572 (712)
....+++.+-...+|+.+.+.|
T Consensus 273 ~~g~v~rS~D~G~tW~~~~~~~ 294 (763)
T 3a0f_A 273 LYGEVWSYDPTNGNWKHITPSR 294 (763)
T ss_dssp CCEEEEEEETTTTEEEECCTTS
T ss_pred cceeEEEEeCCCCceEECCCCC
Confidence 2457889988889999987544
No 375
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=52.85 E-value=1.5e+02 Score=29.15 Aligned_cols=127 Identities=9% Similarity=0.008 Sum_probs=65.2
Q ss_pred eEEEEE-CCeEEEEcccCCCCCCceeEEeecCCCceEEcccC---C-ccccceeEEEE--CCEEEEEcccCCCCccCceE
Q psy14726 437 VSTAVH-HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPM---N-VERSDASATTL--QGKIYITGGFNGHNCLNSCE 509 (712)
Q Consensus 437 ~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~ 509 (712)
..+++. +|++|+......... .+++.++ +.+-...+.. + ........+.+ +++|||+.-.........+.
T Consensus 20 ~~va~~~~g~~~v~~~~~~~~~-~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 20 GNITLTPDGRLFLSLHQFYQPE-MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp EEEEECTTSCEEEEECGGGCCS-CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred ceEEECCCCCEEEEeCCCCCCc-eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 344444 789998743221111 5677777 4443322211 0 11122233344 58999975211001135799
Q ss_pred EeeCCCCeeEEeCCCCC----C-CcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCc-EEEc
Q psy14726 510 VYDPECNQWTLIEPMRH----R-RSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKT-WSQV 568 (712)
Q Consensus 510 ~yd~~~~~W~~~~~~p~----~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~ 568 (712)
+||+.+++-...-.++. + ..-..+++- ++.+|+..... .....+.+||+.+++ |..+
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~--~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP--DDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS--GGGCEEEEEETTTCCEEEEC
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc--CCCCeEEEEECCCCCEEEEe
Confidence 99999887432222221 1 122344444 47899984210 024678999998654 5555
No 376
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=51.98 E-value=65 Score=38.15 Aligned_cols=176 Identities=12% Similarity=0.030 Sum_probs=97.3
Q ss_pred cceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceE-Ecc----cCCccccceeEEEE---CCEEEEEcccCCCCcc
Q psy14726 434 RCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWS-LIA----PMNVERSDASATTL---QGKIYITGGFNGHNCL 505 (712)
Q Consensus 434 r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~----~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~ 505 (712)
-.++++....+.+ ++|.-....+...++.|+.....|- ... .+.....++++++. ++..||+|.-. ....
T Consensus 334 q~GfSa~~t~d~~-~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP~-~~~~ 411 (1095)
T 3k6s_A 334 QEGFSAVFTPDGP-VLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPR-YQHT 411 (1095)
T ss_dssp CTTSSEECCTTCC-EEEESCSTTTTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEETT-GGGT
T ss_pred cccccceecCCcc-eEcccccCCccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEccc-cccc
Confidence 3455666665555 7787665566677888887665443 221 12233334555442 23456776432 2334
Q ss_pred CceEEeeCCCCeeEEeCCC----CCCCcceEEEEEC------CEEEEEcCCC--CCCccceEEEEeCCC--CcEEEcCCC
Q psy14726 506 NSCEVYDPECNQWTLIEPM----RHRRSGVSCIAYH------ECIYVIGGFN--GMSRMCNGEKYNPVT--KTWSQVPDM 571 (712)
Q Consensus 506 ~~v~~yd~~~~~W~~~~~~----p~~r~~~~~~~~~------~~iyv~GG~~--~~~~~~~v~~yd~~~--~~W~~~~~~ 571 (712)
..|++|......|+....+ .....++++++.| ..|+++|.-. .......++.|.-.. ..|.....+
T Consensus 412 G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~~l 491 (1095)
T 3k6s_A 412 GKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVL 491 (1095)
T ss_dssp CEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCSSC
T ss_pred ceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeEEe
Confidence 6788998877788776422 2334566666642 2477777521 123346788886543 458743222
Q ss_pred ------CCCccceEEEEEC-----C--EEEEEcccCCCceeeeEEEEECCCC-eE
Q psy14726 572 ------YNPRSNFAIEVID-----D--MIFAIGGFNGVTTIYHVECYDEKTD-EW 612 (712)
Q Consensus 572 ------p~~r~~~~~~~~~-----~--~i~v~GG~~~~~~~~~v~~yd~~~~-~W 612 (712)
+..|.+.+++.++ | -| ++|..........+++|.-..+ .|
T Consensus 492 ~g~~~~~~~~FG~sva~~gD~NgDG~~Dl-~VGAP~~~~~~G~vyi~~g~~~~g~ 545 (1095)
T 3k6s_A 492 YGEQGHPWGRFGAALTVLGDVNGDKLTDV-VIGAPGEEENRGAVYLFHGVLGPSI 545 (1095)
T ss_dssp CCCCSCSSCCBTSCEEEEECSSSSSCCEE-EEECTTTTTSCCBEEEEEBCSSSCB
T ss_pred ecccCCccccCccceEeecccCCCCCcCE-EEeCCcCCCCCCEEEEecCCCCCCc
Confidence 3467788887752 2 24 4443322223346888887665 45
No 377
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=51.98 E-value=1.8e+02 Score=28.48 Aligned_cols=185 Identities=11% Similarity=-0.028 Sum_probs=102.4
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCc---EEEeCCCCCCcceeEEEE--ECCeEEEEcccCCCCCCceeEEeecCCCc
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKV---WKEIAPMNFKRCYVSTAV--HHDVIYAMGGYNGQRRQNSVEKYNYTENQ 470 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 470 (712)
++.||+.--. ...++++++.... +.....+..| .++++ .++.||+.-. ..+.++++++....
T Consensus 46 ~~~lyw~D~~-----~~~I~r~~~~g~~~~~~~~~~~l~~p---~glavd~~~g~ly~~d~-----~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 46 HGLIYWSDVS-----EEAIKRTEFNKTESVQNVVVSGLLSP---DGLACDWLGEKLYWTDS-----ETNRIEVSNLDGSL 112 (318)
T ss_dssp GTEEEEEETT-----TTEEEEEETTSSSCCCEEEEECCSCC---CEEEEETTTTEEEEEET-----TTTEEEEEETTSCS
T ss_pred CCEEEEEECC-----CCcEEEEEccCCCceEEEEcCCCCCc---cEEEEEcCCCeEEEEEC-----CCCEEEEEECCCCc
Confidence 5788887432 3568899887652 2222222222 23444 4789999743 12578999987654
Q ss_pred eEEcc--cCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEc
Q psy14726 471 WSLIA--PMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIG 544 (712)
Q Consensus 471 W~~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 544 (712)
-..+. .+..| .+.++- ++.||+.--. ....++++++....-+.+..-.. ..-.+.+.- +++||+.-
T Consensus 113 ~~~l~~~~~~~P---~giavdp~~g~ly~td~~----~~~~I~r~~~dG~~~~~~~~~~l-~~Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 113 RKVLFWQELDQP---RAIALDPSSGFMYWTDWG----EVPKIERAGMDGSSRFIIINSEI-YWPNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp CEEEECSSCSSE---EEEEEEGGGTEEEEEECS----SSCEEEEEETTSCSCEEEECSSC-SCEEEEEEETTTTEEEEEE
T ss_pred EEEEEeCCCCCc---cEEEEeCCCCEEEEEecC----CCCEEEEEEcCCCCeEEEEECCC-CCccEEEEeccCCEEEEEE
Confidence 33332 22222 122332 5889987521 13568999886443233311111 112234433 68999985
Q ss_pred CCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 545 GFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 545 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
.. ...|+++|+....-+.+... ....-.++++.++.+|+.--. ...|.++|+.+++-
T Consensus 185 ~~-----~~~I~~~d~dG~~~~~~~~~-~~~~P~glav~~~~lywtd~~-----~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 185 AK-----LNFIHKSNLDGTNRQAVVKG-SLPHPFALTLFEDILYWTDWS-----THSILACNKYTGEG 241 (318)
T ss_dssp TT-----TTEEEEEETTSCSCEEEECS-CCSCEEEEEEETTEEEEEETT-----TTEEEEEETTTCCS
T ss_pred CC-----CCEEEEEcCCCCceEEEecC-CCCCceEEEEeCCEEEEEecC-----CCeEEEEECCCCCc
Confidence 32 46899999875433333221 112235677778999998321 23689999866543
No 378
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=51.79 E-value=2.3e+02 Score=29.59 Aligned_cols=115 Identities=9% Similarity=-0.070 Sum_probs=56.4
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCC----ceEEcc-------cCCccccceeEEEECCEEEEEc-ccCCCCccCceEE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTEN----QWSLIA-------PMNVERSDASATTLQGKIYITG-GFNGHNCLNSCEV 510 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~----~W~~~~-------~~p~~r~~~~~~~~~~~iyv~G-G~~~~~~~~~v~~ 510 (712)
..++|+-|.. .+.++++|..++ +-.+.- .....+-++..+.-+| |||.. |.........+..
T Consensus 95 r~~l~v~~l~-----s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 95 RRFLIVPGLR-----SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILM 168 (462)
T ss_dssp SCEEEEEBTT-----TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEE
T ss_pred CCEEEEccCC-----CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEE
Confidence 3466666653 367999998776 322211 1111122222233356 77732 2212234578999
Q ss_pred eeCCCCeeEEeCC---CCCCCcceEEEE-EC-CEEEEEc---------CCCCC----CccceEEEEeCCCCc
Q psy14726 511 YDPECNQWTLIEP---MRHRRSGVSCIA-YH-ECIYVIG---------GFNGM----SRMCNGEKYNPVTKT 564 (712)
Q Consensus 511 yd~~~~~W~~~~~---~p~~r~~~~~~~-~~-~~iyv~G---------G~~~~----~~~~~v~~yd~~~~~ 564 (712)
+|.+|.+-..--+ .|.. ..+.... -+ +.+|+.- |++.. ...+.|..||..+.+
T Consensus 169 lD~~T~~v~~~~~~~~~~~~-~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k 239 (462)
T 2ece_A 169 LDHYSFEPLGKWEIDRGDQY-LAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK 239 (462)
T ss_dssp ECTTTCCEEEECCSBCTTCC-CCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE
T ss_pred EECCCCeEEEEEccCCCCcc-ccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc
Confidence 9999776322211 1111 1111221 23 4444442 22222 235889999998763
No 379
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=51.58 E-value=3.7e+02 Score=31.94 Aligned_cols=137 Identities=18% Similarity=0.253 Sum_probs=80.0
Q ss_pred CCceeEEeecCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeC--CCCCCCcceEEE
Q psy14726 457 RQNSVEKYNYTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIE--PMRHRRSGVSCI 534 (712)
Q Consensus 457 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~p~~r~~~~~~ 534 (712)
....++.|+...++.+.+...+..-.-.+.+.++|++.+.-| +.+.+|+...++.-... ..+. .......
T Consensus 862 ~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig-------~~l~vy~l~~~~~L~~~~~~~~~-i~~~~l~ 933 (1158)
T 3ei3_A 862 KQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASIN-------STVRLYEWTTEKELRTECNHYNN-IMALYLK 933 (1158)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEET-------TEEEEEEECTTSCEEEEEEECCC-SCEEEEE
T ss_pred CceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcC-------CEEEEEECCCCceEEEEeecccc-EEEEEEe
Confidence 345688888877777777665555455667778998777544 56888887765421111 1111 0111233
Q ss_pred EECCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEECCEEEEEcccCCCceeeeEEEEECC
Q psy14726 535 AYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTIYHVECYDEK 608 (712)
Q Consensus 535 ~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 608 (712)
+.++.|++ |-.. ..-.+..|+...++-..++.-..+|...++..+++. .++|+....+. -+..|+++
T Consensus 934 ~~~~~I~v-gD~~---~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl--~vl~~~~~ 1000 (1158)
T 3ei3_A 934 TKGDFILV-GDLM---RSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFNL--FVCQKDSA 1000 (1158)
T ss_dssp EETTEEEE-EESS---BCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSEE--EEEEECTT
T ss_pred ccCCEEEE-EEhh---heEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCCcE--EEEecCCC
Confidence 45676654 4321 123456789999999999877788887777777443 33444332221 34455553
No 380
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=51.52 E-value=2.2e+02 Score=29.28 Aligned_cols=116 Identities=14% Similarity=0.081 Sum_probs=57.7
Q ss_pred CeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeEEe
Q psy14726 444 DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWTLI 521 (712)
Q Consensus 444 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 521 (712)
+.+++.|+.+ ..+..||..+..-.. ...+ ......++.+ +|+.++.|+.++ .+..||+....-..+
T Consensus 162 ~~~las~s~D-----g~v~iwD~~~~~~~~-~~~~-~~~~v~~v~wspdg~~lasgs~dg-----~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 162 PSMVAVCLAD-----GSIAVLQVTETVKVC-ATLP-STVAVTSVCWSPKGKQLAVGKQNG-----TVVQYLPTLQEKKVI 229 (434)
T ss_dssp TTEEEEEETT-----SCEEEEEESSSEEEE-EEEC-GGGCEEEEEECTTSSCEEEEETTS-----CEEEECTTCCEEEEE
T ss_pred CCEEEEEECC-----CeEEEEEcCCCccee-eccC-CCCceeEEEEcCCCCEEEEEcCCC-----cEEEEccCCcccccc
Confidence 5677777754 458889988763211 1111 1122233333 677777787653 588899873333333
Q ss_pred CCCCCCC-----cceEEEEECCEEEEEc--CCCCC-CccceEEEEeCCCC------cEEEcCCC
Q psy14726 522 EPMRHRR-----SGVSCIAYHECIYVIG--GFNGM-SRMCNGEKYNPVTK------TWSQVPDM 571 (712)
Q Consensus 522 ~~~p~~r-----~~~~~~~~~~~iyv~G--G~~~~-~~~~~v~~yd~~~~------~W~~~~~~ 571 (712)
....... ...++....+..|+++ ..++. .....+..||..+. .|....+.
T Consensus 230 ~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~ 293 (434)
T 2oit_A 230 PCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEP 293 (434)
T ss_dssp CCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCS
T ss_pred cCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccC
Confidence 2111101 1222233334444432 12222 23456888887643 56666443
No 381
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=49.79 E-value=76 Score=32.93 Aligned_cols=142 Identities=11% Similarity=0.078 Sum_probs=76.4
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CC-EEEEEcccCCCCccCceEEeeCCCCeeE
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QG-KIYITGGFNGHNCLNSCEVYDPECNQWT 519 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 519 (712)
++.||+.--. ..+.++|+.+++.+.+.+ .-.......+ ++ .||+....++ .....+..++... .|.
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~---~~~~P~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~~~g-~~~ 217 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYS---GLSKVRTICWTHEADSMIITNDQNN-NDRPNNYILTRES-GFK 217 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEEC---CCSCEEEEEECTTSSEEEEEECCSC-TTSEEEEEEEGGG-TSC
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEec---CCCCcceEEEeCCCCEEEEEeCCCC-cccceEEEEeCCC-cee
Confidence 4789987421 689999999988877654 1222333333 34 5999875332 1123456666533 232
Q ss_pred ---EeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEEE-CC-EEEEEcc
Q psy14726 520 ---LIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEVI-DD-MIFAIGG 592 (712)
Q Consensus 520 ---~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~i~v~GG 592 (712)
.+..+..| +++++. ++.||+.--. ...|++||+.+..-..+...+....-.+++.. ++ .||+.--
T Consensus 218 ~~~~l~~~~~p---~giavdp~~g~lyv~d~~-----~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 218 VITELTKGQNC---NGAETHPINGELYFNSWN-----AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp SEEEEEECSSC---CCEEECTTTCCEEEEETT-----TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred eeeeeccCCCc---eEEEEeCCCCEEEEEECC-----CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 33333322 333333 5789987532 35799999987765333222211111233333 34 4888843
Q ss_pred cCCCceeeeEEEEECC
Q psy14726 593 FNGVTTIYHVECYDEK 608 (712)
Q Consensus 593 ~~~~~~~~~v~~yd~~ 608 (712)
.+ +.++++++.
T Consensus 290 ~~-----~~I~~~~~d 300 (430)
T 3tc9_A 290 NQ-----HYILRSDYD 300 (430)
T ss_dssp TT-----TEEEEEEEE
T ss_pred CC-----CEEEEEeCC
Confidence 22 256665544
No 382
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=48.36 E-value=3.3e+02 Score=30.35 Aligned_cols=210 Identities=13% Similarity=0.016 Sum_probs=106.3
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCc------ceeEE-E-EECCeEEEEcc-----cCCCCCCceeE
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKR------CYVST-A-VHHDVIYAMGG-----YNGQRRQNSVE 462 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r------~~~~~-~-~~~~~iyv~GG-----~~~~~~~~~v~ 462 (712)
++...+++=..+++....+..||..|+++..-.--|... ..++. + .-++.+|+.-- .+..+....++
T Consensus 140 ~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~~v~ 219 (711)
T 4hvt_A 140 NPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPNSLY 219 (711)
T ss_dssp STTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBCEEE
T ss_pred CCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCCEEE
Confidence 333444433334455677899999999986421112221 12233 3 33567777521 22233345566
Q ss_pred EeecCCCce--EEcccCCccccceeEEEE-CC-----EEEEEcccCCCCccCceEEeeCCC--CeeEEeCCCCCCCcceE
Q psy14726 463 KYNYTENQW--SLIAPMNVERSDASATTL-QG-----KIYITGGFNGHNCLNSCEVYDPEC--NQWTLIEPMRHRRSGVS 532 (712)
Q Consensus 463 ~yd~~~~~W--~~~~~~p~~r~~~~~~~~-~~-----~iyv~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~p~~r~~~~ 532 (712)
+....|..= ..+=.-+......++.+. ++ .++|..+.+ ...+.++..|... ..|..+. +|.. .. -
T Consensus 220 ~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~l~-~~~~-~~-~ 294 (711)
T 4hvt_A 220 IWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKD--FYNYDNYILDTKYKNLKLQKIN-MPSD-AT-L 294 (711)
T ss_dssp EEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESS--SSCEEEEEEECSSSSCEEEECC-SCTT-CE-E
T ss_pred EEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecc--cCceeEEEEcCCCCCCcceEee-cCCc-ce-E
Confidence 665544321 111001111222222222 22 244432222 2336677777653 6787773 3332 22 2
Q ss_pred EEEECCEEEEEcCCCC-----CCccceEEEEeCCC--------CcEEEcCCCCCCccceEEEEECCEEEEEcccCCCcee
Q psy14726 533 CIAYHECIYVIGGFNG-----MSRMCNGEKYNPVT--------KTWSQVPDMYNPRSNFAIEVIDDMIFAIGGFNGVTTI 599 (712)
Q Consensus 533 ~~~~~~~iyv~GG~~~-----~~~~~~v~~yd~~~--------~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~ 599 (712)
....++++|+....+- ......+...|..+ ..|+.+-.....+.-.++...++.+++..-.++ .
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~---~ 371 (711)
T 4hvt_A 295 QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATYDNV---V 371 (711)
T ss_dssp EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEEETT---E
T ss_pred eeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEEECC---E
Confidence 4566999999875331 11356788888754 479874222223344455556777777644333 2
Q ss_pred eeEEEEECCCCeEE
Q psy14726 600 YHVECYDEKTDEWY 613 (712)
Q Consensus 600 ~~v~~yd~~~~~W~ 613 (712)
..+.++|+.++.|.
T Consensus 372 ~~l~~~~~~~g~~~ 385 (711)
T 4hvt_A 372 AKVVTFTLENEQWT 385 (711)
T ss_dssp EEEEEECEETTEEC
T ss_pred EEEEEEECCCCceE
Confidence 36888998888884
No 383
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=45.87 E-value=3.3e+02 Score=29.72 Aligned_cols=197 Identities=8% Similarity=-0.006 Sum_probs=113.7
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEE-
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATT- 488 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~- 488 (712)
.++.+.|+.+..-..+.+++.-+...++++. +++||+.--. ...++++++.....+.+...... .-.++++
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~-----~~~I~r~~~~g~~~~~v~~~g~~-~P~GlAvD 88 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDIS-----LKTISRAFMNGSALEHVVEFGLD-YPEGMAVD 88 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCS-CCCEEEEE
T ss_pred CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECC-----CCeEEEEECCCCCcEEEEeCCCC-CcceEEEE
Confidence 4678888877654444444433445555554 6899997432 35789999887666655332211 1123333
Q ss_pred -ECCEEEEEcccCCCCccCceEEeeCCCCeeEEe--CCCCCCCcceEEEEE--CCEEEEEc-CCCCCCccceEEEEeCCC
Q psy14726 489 -LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLI--EPMRHRRSGVSCIAY--HECIYVIG-GFNGMSRMCNGEKYNPVT 562 (712)
Q Consensus 489 -~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~--~~~p~~r~~~~~~~~--~~~iyv~G-G~~~~~~~~~v~~yd~~~ 562 (712)
.+++||+.-.. ...++++++....=+.+ ..+..|+ ++++. ++.||+.- |. ...|++.++..
T Consensus 89 ~~~~~LY~tD~~-----~~~I~v~~~dG~~~~~l~~~~l~~P~---~iavdp~~G~lY~tD~g~-----~~~I~r~~~dG 155 (628)
T 4a0p_A 89 WLGKNLYWADTG-----TNRIEVSKLDGQHRQVLVWKDLDSPR---ALALDPAEGFMYWTEWGG-----KPKIDRAAMDG 155 (628)
T ss_dssp TTTTEEEEEETT-----TTEEEEEETTSTTCEEEECSSCCCEE---EEEEETTTTEEEEEECSS-----SCEEEEEETTS
T ss_pred eCCCEEEEEECC-----CCEEEEEecCCCcEEEEEeCCCCCcc---cEEEccCCCeEEEeCCCC-----CCEEEEEeCCC
Confidence 36899997532 35788998865432333 2333332 34444 68999974 21 46899998876
Q ss_pred CcEEEcC-CCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEc-cCCCCcccceEEEEEcCcceeEe
Q psy14726 563 KTWSQVP-DMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEA-TDMNIYRSALSACVIMGLPNVYD 638 (712)
Q Consensus 563 ~~W~~~~-~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~~~v~~ 638 (712)
..-+.+. .+.. -.+++.- +++||+.=.. .+.++.+|+....=+.+ ..++. ..+.++.++.+|+..
T Consensus 156 ~~~~~l~~~~~~---P~GlalD~~~~~LY~aD~~-----~~~I~~~d~dG~~~~v~~~~l~~---P~glav~~~~ly~tD 224 (628)
T 4a0p_A 156 SERTTLVPNVGR---ANGLTIDYAKRRLYWTDLD-----TNLIESSNMLGLNREVIADDLPH---PFGLTQYQDYIYWTD 224 (628)
T ss_dssp CSCEEEECSCSS---EEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECCSC---EEEEEEETTEEEEEE
T ss_pred CceEEEECCCCC---cceEEEccccCEEEEEECC-----CCEEEEEcCCCCceEEeeccCCC---ceEEEEECCEEEEec
Confidence 5544443 2221 1233333 6899998432 24688999865432333 23332 346677778888774
No 384
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=45.31 E-value=11 Score=37.34 Aligned_cols=35 Identities=23% Similarity=0.429 Sum_probs=30.8
Q ss_pred ecChhhHHHHHHHhhhcChHHHHHHHHHhhcccCC
Q psy14726 159 HITEDNVASLLLATDFFCMSKAQDLCCDFIKRLTT 193 (712)
Q Consensus 159 ~i~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~l~ 193 (712)
.++.+++..++.+|+.++++.|++.|.+||..++.
T Consensus 271 ~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~ 305 (312)
T 3hqi_A 271 NLSVENAAEILILADLHSADQLKTQAVDFINYHAT 305 (312)
T ss_dssp TCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-
T ss_pred cCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 36778999999999999999999999999987654
No 385
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=45.17 E-value=3.3e+02 Score=29.46 Aligned_cols=174 Identities=10% Similarity=0.043 Sum_probs=90.2
Q ss_pred CCEEEEEeecCCCCccceEEEEECCCCcEEEeC-CCCC-CcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCce-
Q psy14726 396 GYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIA-PMNF-KRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQW- 471 (712)
Q Consensus 396 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~~~-~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W- 471 (712)
++..++.++.++ .+..+|..+ .+..+. .++. .+..++++. .+|+..+.||.+ ..+..||..++.-
T Consensus 96 dG~~LAs~s~dg-----~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~D-----GtVkIWd~~~~~l~ 164 (588)
T 2j04_A 96 IDDWMAVLSNNG-----NVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNED-----GELQFFSIRKNSEN 164 (588)
T ss_dssp SSSCEEEEETTS-----CEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETT-----SEEEEEECCCCTTT
T ss_pred CCCEEEEEeCCC-----cEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCC-----CEEEEEECCCCccc
Confidence 777777777543 477777443 444433 2221 233455543 578888888864 4688899887631
Q ss_pred ----EEcccCCcccc-----ceeEEEECCEEEEEcccCCCCccCceEEeeCCCCe----eEEeCCCCCCCcceEEEEECC
Q psy14726 472 ----SLIAPMNVERS-----DASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQ----WTLIEPMRHRRSGVSCIAYHE 538 (712)
Q Consensus 472 ----~~~~~~p~~r~-----~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~----W~~~~~~p~~r~~~~~~~~~~ 538 (712)
..+..++.... -.+.+...+. ++.||.+ +.+..+|..++. |..+.+... ..-.+++..+
T Consensus 165 ~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D-----~tVrlWd~~~~~~~~~~~tL~~~h~-~~V~svaFsg- 236 (588)
T 2j04_A 165 TPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSN-----NSVFSMTVSASSHQPVSRMIQNASR-RKITDLKIVD- 236 (588)
T ss_dssp CCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETT-----CCEEEECCCSSSSCCCEEEEECCCS-SCCCCEEEET-
T ss_pred cccceeeeeeecccccccccEEEEEEcCCc-EEEEeCC-----CeEEEEECCCCccccceeeeccccc-CcEEEEEEEC-
Confidence 11222211111 1122233444 6666654 567888877665 334422111 1122222234
Q ss_pred EEEEEcCCCCCCccceEEEEeCCCCcEEEcCCCCCCccceEEEE--E-CCEEEEEcccCC
Q psy14726 539 CIYVIGGFNGMSRMCNGEKYNPVTKTWSQVPDMYNPRSNFAIEV--I-DDMIFAIGGFNG 595 (712)
Q Consensus 539 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~-~~~i~v~GG~~~ 595 (712)
...+.++ ...|..||..+.+-..... ...-....++. - ++..+++++.++
T Consensus 237 ~~LASa~------~~tIkLWd~~~~~~~~~~~-gh~~~V~~va~~~s~d~~~La~a~edG 289 (588)
T 2j04_A 237 YKVVLTC------PGYVHKIDLKNYSISSLKT-GSLENFHIIPLNHEKESTILLMSNKTS 289 (588)
T ss_dssp TEEEEEC------SSEEEEEETTTTEEEEEEC-SCCSCCCEEEETTCSSCEEEEECSSCE
T ss_pred CEEEEEe------CCeEEEEECCCCeEEEEEc-CCCceEEEEEeeeCCCCCEEEEEcCCC
Confidence 4445554 1589999998876644321 11111223333 2 567788877665
No 386
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=42.88 E-value=26 Score=30.87 Aligned_cols=46 Identities=13% Similarity=0.095 Sum_probs=30.2
Q ss_pred CChhhHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhhcCccccccCCHHHHHhhcc
Q psy14726 192 TTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEIIS 247 (712)
Q Consensus 192 l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~l~~~~~~f~~l~~~~l~~ll~ 247 (712)
++.++++.++..|..+++..|.+.|.++++..+. .-+++++.+++.
T Consensus 93 vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik----------gkt~eeir~~f~ 138 (160)
T 2p1m_A 93 IDQATLFELILAANYLNIKNLLDLTCQTVADMIK----------GKTPEEIRTTFN 138 (160)
T ss_dssp --------CHHHHHHTTCHHHHHHHHHHHHHTTT----------TCCHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc----------CCCHHHHHHHcC
Confidence 8899999999999999999999999999865532 235677777765
No 387
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=42.55 E-value=1.5e+02 Score=35.08 Aligned_cols=176 Identities=10% Similarity=0.024 Sum_probs=96.2
Q ss_pred cceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEE-EeCC----CCCCcceeEEEEE--C-CeEEEEcccCCCCCCc
Q psy14726 388 AYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWK-EIAP----MNFKRCYVSTAVH--H-DVIYAMGGYNGQRRQN 459 (712)
Q Consensus 388 ~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~~----~~~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~ 459 (712)
.++++....+.+ ++|+-........++.|+.....|. .... +.....++++++. + +..+|+|-- ......
T Consensus 335 ~GfSa~~t~d~~-~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP-~~~~~G 412 (1095)
T 3k6s_A 335 EGFSAVFTPDGP-VLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAP-RYQHTG 412 (1095)
T ss_dssp TTSSEECCTTCC-EEEESCSTTTTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEET-TGGGTC
T ss_pred ccccceecCCcc-eEcccccCCccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEcc-cccccc
Confidence 344455554444 7777555455667888887655543 2211 2233345666542 2 345666642 223456
Q ss_pred eeEEeecCCCceEEcccC----CccccceeEEEEC------CEEEEEcccCC--CCccCceEEeeCCC--CeeEEeCCC-
Q psy14726 460 SVEKYNYTENQWSLIAPM----NVERSDASATTLQ------GKIYITGGFNG--HNCLNSCEVYDPEC--NQWTLIEPM- 524 (712)
Q Consensus 460 ~v~~yd~~~~~W~~~~~~----p~~r~~~~~~~~~------~~iyv~GG~~~--~~~~~~v~~yd~~~--~~W~~~~~~- 524 (712)
.+++|......|.....+ .....++++++.+ ..++++|.-.. ......|++|.... ..|.....+
T Consensus 413 ~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~~l~ 492 (1095)
T 3k6s_A 413 KAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLY 492 (1095)
T ss_dssp EEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCSSCC
T ss_pred eEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeEEee
Confidence 789998877788765432 2334556666642 25777774321 12235688875433 458643322
Q ss_pred -----CCCCcceEEEEECC-------EEEEEcCCCCCCccceEEEEeCCCC-cEE
Q psy14726 525 -----RHRRSGVSCIAYHE-------CIYVIGGFNGMSRMCNGEKYNPVTK-TWS 566 (712)
Q Consensus 525 -----p~~r~~~~~~~~~~-------~iyv~GG~~~~~~~~~v~~yd~~~~-~W~ 566 (712)
+..|++.+++.++| .|+|-.... ......+++|.-..+ .|.
T Consensus 493 g~~~~~~~~FG~sva~~gD~NgDG~~Dl~VGAP~~-~~~~G~vyi~~g~~~~g~~ 546 (1095)
T 3k6s_A 493 GEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGE-EENRGAVYLFHGVLGPSIS 546 (1095)
T ss_dssp CCCSCSSCCBTSCEEEEECSSSSSCCEEEEECTTT-TTSCCBEEEEEBCSSSCBC
T ss_pred cccCCccccCccceEeecccCCCCCcCEEEeCCcC-CCCCCEEEEecCCCCCCcc
Confidence 34677888776522 354433222 233567888887655 553
No 388
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=41.96 E-value=59 Score=31.55 Aligned_cols=133 Identities=11% Similarity=0.015 Sum_probs=61.4
Q ss_pred cceEEEEECCEEEEEeecCCCCccceEEEEECC--CCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEee
Q psy14726 388 AYHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAV--TKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYN 465 (712)
Q Consensus 388 ~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd 465 (712)
..|++++-++.+|.+|-....+.-- |. ......+. .-..|++++.+|+||.+|-... ..+.. -.
T Consensus 72 ~~hs~~l~~G~v~~wG~n~~Gqlg~------P~~~~~~v~~ia----~G~~hs~al~~G~v~~wG~n~~-gqlg~---~~ 137 (282)
T 3qhy_B 72 NYHSLALKDGEVIAWGGNEDGQTTV------PAEARSGVDAIA----AGAWASYALKDGKVIAWGDDSD-GQTTV---PA 137 (282)
T ss_dssp SSEEEEEETTEEEEEECCTTSTTCC------CGGGSSSEEEEE----EETTEEEEEETTEEEEEECCTT-STTSC---CG
T ss_pred CCEEEEEECCEEEEeeCCCCCCCCC------CcccCCCeEEEE----CcCCEEEEEeCCeEEEecCCCC-CcCCC---Cc
Confidence 3466666699999998643222100 00 01111111 1223555444999999985321 11110 00
Q ss_pred cCCCceEEcccCCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEECCEEEEEcC
Q psy14726 466 YTENQWSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAYHECIYVIGG 545 (712)
Q Consensus 466 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 545 (712)
+.......+ ..-..|+++.-++++|..|-....+. . +- .........+.. -..|+++.-++++|..|-
T Consensus 138 ~~~~~i~~i----~~G~~~~~~l~~G~v~~wG~n~~gql-g-~p--~~~~~~v~~i~~----G~~hs~al~~G~v~~wG~ 205 (282)
T 3qhy_B 138 EAQSGVTAL----DGGVYTALAVKNGGVIAWGDNYFGQT-T-VP--AEAQSGVDDVAG----GIFHSLALKDGKVIAWGD 205 (282)
T ss_dssp GGGSSEEEE----EECSSEEEEEETTEEEEEECCTTSTT-S-CC--GGGGSSEEEEEE----CSSEEEEEETTEEEEEEC
T ss_pred cCCCCeEEE----EcccCEEEEEECCEEEEecCCCCCCC-C-Cc--eecCCCeEEEEe----cCCEEEEEECCeEEEEEC
Confidence 011112222 12234566655999999996542211 0 00 000112333321 123445447899999996
Q ss_pred C
Q psy14726 546 F 546 (712)
Q Consensus 546 ~ 546 (712)
.
T Consensus 206 n 206 (282)
T 3qhy_B 206 N 206 (282)
T ss_dssp C
T ss_pred C
Confidence 3
No 389
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=38.58 E-value=2.9e+02 Score=26.96 Aligned_cols=198 Identities=8% Similarity=0.042 Sum_probs=103.3
Q ss_pred ceEEEEECCCCcEEEeCCCCCCcceeEEEEE--CCeEEEEcccCCCCCCceeEEeecCCCc---eEEcccCCccccceeE
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNFKRCYVSTAVH--HDVIYAMGGYNGQRRQNSVEKYNYTENQ---WSLIAPMNVERSDASA 486 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~~r~~~~~ 486 (712)
.++.++|+....-......+......++... +++||+.-- ....++++++.... +.....+..+ .+.
T Consensus 13 ~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~-----~~~~I~r~~~~g~~~~~~~~~~~l~~p---~gl 84 (318)
T 3sov_A 13 RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV-----SEEAIKRTEFNKTESVQNVVVSGLLSP---DGL 84 (318)
T ss_dssp EEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEET-----TTTEEEEEETTSSSCCCEEEEECCSCC---CEE
T ss_pred CeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEEC-----CCCcEEEEEccCCCceEEEEcCCCCCc---cEE
Confidence 4677888876531100011111222333333 579999743 23578999987652 2222222211 233
Q ss_pred EE--ECCEEEEEcccCCCCccCceEEeeCCCCeeEEe--CCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeC
Q psy14726 487 TT--LQGKIYITGGFNGHNCLNSCEVYDPECNQWTLI--EPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNP 560 (712)
Q Consensus 487 ~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~--~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~ 560 (712)
++ .++.||+.-.. ...++++++....-+.+ ..+..| .+.++. ++.||+.--. ....|+++++
T Consensus 85 avd~~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~~~~P---~giavdp~~g~ly~td~~----~~~~I~r~~~ 152 (318)
T 3sov_A 85 ACDWLGEKLYWTDSE-----TNRIEVSNLDGSLRKVLFWQELDQP---RAIALDPSSGFMYWTDWG----EVPKIERAGM 152 (318)
T ss_dssp EEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCSSE---EEEEEEGGGTEEEEEECS----SSCEEEEEET
T ss_pred EEEcCCCeEEEEECC-----CCEEEEEECCCCcEEEEEeCCCCCc---cEEEEeCCCCEEEEEecC----CCCEEEEEEc
Confidence 33 37899997532 25688898876543333 223222 233333 5889987511 1367999998
Q ss_pred CCCcEEEc-C-CCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCCeEEEccCCCCcccceEEEEEcCccee
Q psy14726 561 VTKTWSQV-P-DMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTDEWYEATDMNIYRSALSACVIMGLPNV 636 (712)
Q Consensus 561 ~~~~W~~~-~-~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~~~v 636 (712)
....-+.+ . .+. .-.++++- +++||+.-.. ...|+.+|+....-..+..- ......+.++..+.+|+
T Consensus 153 dG~~~~~~~~~~l~---~Pnglavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~-~~~~P~glav~~~~lyw 223 (318)
T 3sov_A 153 DGSSRFIIINSEIY---WPNGLTLDYEEQKLYWADAK-----LNFIHKSNLDGTNRQAVVKG-SLPHPFALTLFEDILYW 223 (318)
T ss_dssp TSCSCEEEECSSCS---CEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECS-CCSCEEEEEEETTEEEE
T ss_pred CCCCeEEEEECCCC---CccEEEEeccCCEEEEEECC-----CCEEEEEcCCCCceEEEecC-CCCCceEEEEeCCEEEE
Confidence 64332222 1 221 12344443 7899998332 24789999875443333221 11223456667777777
Q ss_pred Ee
Q psy14726 637 YD 638 (712)
Q Consensus 637 ~~ 638 (712)
..
T Consensus 224 td 225 (318)
T 3sov_A 224 TD 225 (318)
T ss_dssp EE
T ss_pred Ee
Confidence 63
No 390
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=37.40 E-value=2.4e+02 Score=29.02 Aligned_cols=60 Identities=13% Similarity=0.104 Sum_probs=34.4
Q ss_pred CEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCC
Q psy14726 491 GKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVT 562 (712)
Q Consensus 491 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~ 562 (712)
+.+++.|+.++ .+..||..+..-.. ..... .....++.. +++.++.|+.+ ..+..||+..
T Consensus 162 ~~~las~s~Dg-----~v~iwD~~~~~~~~-~~~~~-~~~v~~v~wspdg~~lasgs~d-----g~v~iwd~~~ 223 (434)
T 2oit_A 162 PSMVAVCLADG-----SIAVLQVTETVKVC-ATLPS-TVAVTSVCWSPKGKQLAVGKQN-----GTVVQYLPTL 223 (434)
T ss_dssp TTEEEEEETTS-----CEEEEEESSSEEEE-EEECG-GGCEEEEEECTTSSCEEEEETT-----SCEEEECTTC
T ss_pred CCEEEEEECCC-----eEEEEEcCCCccee-eccCC-CCceeEEEEcCCCCEEEEEcCC-----CcEEEEccCC
Confidence 66788887664 58888887763211 11111 122222222 56677777754 4688999873
No 391
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=37.14 E-value=1.8e+02 Score=31.48 Aligned_cols=154 Identities=8% Similarity=0.070 Sum_probs=87.6
Q ss_pred CeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE----CCEEEEEcccC------C------CCccCc
Q psy14726 444 DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL----QGKIYITGGFN------G------HNCLNS 507 (712)
Q Consensus 444 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~------~------~~~~~~ 507 (712)
..+||.-. ..+.+.+.|+.+.+-..+-.+|.+..-|+.+.. ++++|+.+.+. + ....+.
T Consensus 102 ~~lfVnd~-----~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 102 RFLFMNDK-----ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEET-----TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CEEEEEcC-----CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 46777432 236799999999987666577777777777753 56788876431 1 134467
Q ss_pred eEEeeCCCCe--eEEeCCCCCCCcceEEEEE-CCEEEEEcCCCC--------------------------------CCcc
Q psy14726 508 CEVYDPECNQ--WTLIEPMRHRRSGVSCIAY-HECIYVIGGFNG--------------------------------MSRM 552 (712)
Q Consensus 508 v~~yd~~~~~--W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~--------------------------------~~~~ 552 (712)
+-+.|.++.+ |+..-+- .+ ....+.. ++.+|+.--... ....
T Consensus 177 vtvID~~t~~v~~qI~Vgg-~p--d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG-NL--DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEEETTTTEEEEEEEESS-CC--CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred EEEEECCCCeEEEEEEeCC-Cc--cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 8889999876 5544211 11 1111111 233333332110 0113
Q ss_pred ceEEEEeCCCCcEEE-cCCCCCCccceEEEEE--CCEEEEEcccCCCceeeeEEEEECCCC
Q psy14726 553 CNGEKYNPVTKTWSQ-VPDMYNPRSNFAIEVI--DDMIFAIGGFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 553 ~~v~~yd~~~~~W~~-~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 610 (712)
+.|-+.|..+.+... +...|.+..-|++..- +..+|+.|+.+ +.+.+||..+.
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s-----~~VsVid~~~~ 309 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLS-----PTVTVLDVTRF 309 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTS-----SBEEEEEGGGH
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCC-----CeEEEEECccc
Confidence 457888888733323 2334455555666666 44566666543 47899998864
No 392
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=36.86 E-value=2.8e+02 Score=28.52 Aligned_cols=140 Identities=14% Similarity=0.159 Sum_probs=73.1
Q ss_pred CeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCeeE--
Q psy14726 444 DVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQWT-- 519 (712)
Q Consensus 444 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-- 519 (712)
+.||+.-.. +.+.++|+.+++.+.+.. .-.......+ ++.||+..-.+. .....+..++.... |.
T Consensus 153 g~Lyv~D~~------~~I~~id~~~g~v~~~~~---~~~~P~giavd~dG~lyVad~~~~-~~~~gv~~~~~~~~-~~~~ 221 (433)
T 4hw6_A 153 DDLYWVGQR------DAFRHVDFVNQYVDIKTT---NIGQCADVNFTLNGDMVVVDDQSS-DTNTGIYLFTRASG-FTER 221 (433)
T ss_dssp CEEEEECBT------SCEEEEETTTTEEEEECC---CCSCEEEEEECTTCCEEEEECCSC-TTSEEEEEECGGGT-TCCE
T ss_pred CEEEEEeCC------CCEEEEECCCCEEEEeec---CCCCccEEEECCCCCEEEEcCCCC-cccceEEEEECCCC-eecc
Confidence 899997431 689999999888776644 1122233333 566998763221 11123555554322 21
Q ss_pred -EeCCCCCCCcceEEEEE--CCEEEEEcCCCCCCccceEEEEeCCCCcE-EEc-CCCCCCccceEEEEE--CCEEEEEcc
Q psy14726 520 -LIEPMRHRRSGVSCIAY--HECIYVIGGFNGMSRMCNGEKYNPVTKTW-SQV-PDMYNPRSNFAIEVI--DDMIFAIGG 592 (712)
Q Consensus 520 -~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-~~~-~~~p~~r~~~~~~~~--~~~i~v~GG 592 (712)
.++.+..| .++++. ++.||+.-.. ...+++||+.+.+- +.+ ...+.+ ....++.- ++.||+.--
T Consensus 222 ~~~~~~~~P---~giavd~~~G~lyv~d~~-----~~~V~~~d~~~g~~~~~~~~~~~~~-~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 222 LSLCNARGA---KTCAVHPQNGKIYYTRYH-----HAMISSYDPATGTLTEEEVMMDTKG-SNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp EEEEECSSB---CCCEECTTTCCEEECBTT-----CSEEEEECTTTCCEEEEEEECSCCS-SCEEEEECTTSSEEEEEET
T ss_pred ccccccCCC---CEEEEeCCCCeEEEEECC-----CCEEEEEECCCCeEEEEEeccCCCC-CcccEEEeCCCCEEEEEeC
Confidence 22222222 223333 5788887532 35799999986655 222 111111 12234433 345888732
Q ss_pred cCCCceeeeEEEEECC
Q psy14726 593 FNGVTTIYHVECYDEK 608 (712)
Q Consensus 593 ~~~~~~~~~v~~yd~~ 608 (712)
. ...|+++|..
T Consensus 293 ~-----~~~I~~~~~d 303 (433)
T 4hw6_A 293 G-----KHCIYRVDYN 303 (433)
T ss_dssp T-----TTEEEEEEBC
T ss_pred C-----CCEEEEEeCC
Confidence 2 2367786654
No 393
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=35.28 E-value=3.3e+02 Score=30.23 Aligned_cols=65 Identities=11% Similarity=-0.038 Sum_probs=36.0
Q ss_pred ceEEEEECCCCcEEEeCCCCC-Ccce--e--EEEEECCeEEEEcccCC----CCCCceeEEeecCCCceEEccc
Q psy14726 412 NSCRCFNAVTKVWKEIAPMNF-KRCY--V--STAVHHDVIYAMGGYNG----QRRQNSVEKYNYTENQWSLIAP 476 (712)
Q Consensus 412 ~~v~~yd~~~~~W~~~~~~~~-~r~~--~--~~~~~~~~iyv~GG~~~----~~~~~~v~~yd~~~~~W~~~~~ 476 (712)
..++.||+.+++=..+-.... .... . -...-+|+..+++.... .....+++.||..+++...+..
T Consensus 36 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~ 109 (740)
T 4a5s_A 36 NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEER 109 (740)
T ss_dssp TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC
T ss_pred CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEccc
Confidence 368999998887554422111 1111 1 12234666555554321 1224678999999988766543
No 394
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=34.07 E-value=5.2 Score=33.59 Aligned_cols=31 Identities=10% Similarity=0.023 Sum_probs=27.3
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKYIL 221 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~ 221 (712)
.++.+|+..++.+|+.++++.|.+.|.+|+.
T Consensus 93 ~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 93 ILSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp EEETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred ccCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 4678999999999999999999999988764
No 395
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=32.79 E-value=90 Score=27.59 Aligned_cols=76 Identities=13% Similarity=0.085 Sum_probs=52.7
Q ss_pred cChhhHHHHHHHhhhcChH--------------HHHHHHHHhhcccCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHHH
Q psy14726 160 ITEDNVASLLLATDFFCMS--------------KAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFV 225 (712)
Q Consensus 160 i~~~~~~~ll~~A~~~~i~--------------~L~~~c~~~l~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~ 225 (712)
++...+..+++.+.+..-. .+.+.-.+|+. ++.+.++.++..|..+++..|.+.|.+.++..+.
T Consensus 57 V~s~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~--vd~~~LfeLi~AAnyLdIk~Lldl~c~~vA~~ik 134 (169)
T 3v7d_A 57 VRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLK--VDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIR 134 (169)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCCC--------CCCCCHHHHHHTC--SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcccCCCcccccccccccccccHHHHHHHc--CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHc
Confidence 3445566677776665421 13334455653 7889999999999999999999999988765432
Q ss_pred HhhcCccccccCCHHHHHhhcc
Q psy14726 226 DVARESEEIVFISEQELEEIIS 247 (712)
Q Consensus 226 ~l~~~~~~f~~l~~~~l~~ll~ 247 (712)
.-+++++.+++.
T Consensus 135 ----------gktpeeiR~~f~ 146 (169)
T 3v7d_A 135 ----------GRSPEEIRRTFN 146 (169)
T ss_dssp ----------TCCHHHHHHHHT
T ss_pred ----------CCCHHHHHHHcC
Confidence 235677777765
No 396
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=29.67 E-value=2.3e+02 Score=30.14 Aligned_cols=143 Identities=10% Similarity=0.039 Sum_probs=67.5
Q ss_pred CCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCccccceeEE--EE--CC-EEEEEcccCCCCccCceEEeeCCCCe
Q psy14726 443 HDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERSDASAT--TL--QG-KIYITGGFNGHNCLNSCEVYDPECNQ 517 (712)
Q Consensus 443 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~--~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~~ 517 (712)
.+..++.|+.+ .+|..||+.+..- ....+..-...-..+ .. ++ .+++.|+.++ ++-.+|..+.+
T Consensus 276 ~~~~lasgs~D-----gtV~lWD~~~~~~-~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~-----tvklWD~~~~~ 344 (524)
T 2j04_B 276 SPTTVVCGFKN-----GFVAEFDLTDPEV-PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDG-----YFYIFNPKDIA 344 (524)
T ss_dssp SSSEEEEEETT-----SEEEEEETTBCSS-CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTS-----EEEEECGGGHH
T ss_pred CCCeEEEEeCC-----CEEEEEECCCCCC-ceEEeecccccEEEEEEEcCCCCCeEEEEeccCC-----eEEEEECCCCC
Confidence 44556666644 4688899876420 000011000111122 12 34 7888887764 57777765532
Q ss_pred e--EEeCCCCCCCcceEEEEE-CCEEEEEcCCCCCCccceEEEEeCCCCcE-EEcCCCCCCccceEEEEE--CCEEEEEc
Q psy14726 518 W--TLIEPMRHRRSGVSCIAY-HECIYVIGGFNGMSRMCNGEKYNPVTKTW-SQVPDMYNPRSNFAIEVI--DDMIFAIG 591 (712)
Q Consensus 518 W--~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~--~~~i~v~G 591 (712)
- +.....+.... .+++.. ++..++.|+.+ ..+..+|..+..- ..+... ......+.+ ++..++.|
T Consensus 345 ~~~~~~~~~~~~~v-~~v~fsp~~~~l~s~~~d-----~tv~lwd~~~~~~~~~l~gH---~~~V~sva~Sp~g~~l~Sg 415 (524)
T 2j04_B 345 TTKTTVSRFRGSNL-VPVVYCPQIYSYIYSDGA-----SSLRAVPSRAAFAVHPLVSR---ETTITAIGVSRLHPMVLAG 415 (524)
T ss_dssp HHCEEEEECSCCSC-CCEEEETTTTEEEEECSS-----SEEEEEETTCTTCCEEEEEC---SSCEEEEECCSSCCBCEEE
T ss_pred cccccccccccCcc-cceEeCCCcCeEEEeCCC-----CcEEEEECcccccceeeecC---CCceEEEEeCCCCCeEEEE
Confidence 1 01111110001 122223 46667777653 4678888876431 111100 111112222 56777788
Q ss_pred ccCCCceeeeEEEEECCCC
Q psy14726 592 GFNGVTTIYHVECYDEKTD 610 (712)
Q Consensus 592 G~~~~~~~~~v~~yd~~~~ 610 (712)
|.++ .+.+||+...
T Consensus 416 s~Dg-----tv~lwd~~~~ 429 (524)
T 2j04_B 416 SADG-----SLIITNAARR 429 (524)
T ss_dssp ETTT-----EEECCBSCSS
T ss_pred ECCC-----EEEEEechHh
Confidence 8765 5667776554
No 397
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=27.28 E-value=5.9 Score=33.25 Aligned_cols=29 Identities=14% Similarity=0.073 Sum_probs=25.6
Q ss_pred cCChhhHHHHHHHHHHcccHHHHHHHHHH
Q psy14726 191 LTTPRNCFGILLFSRDHFCKKLEEWTRKY 219 (712)
Q Consensus 191 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~ 219 (712)
.++.+|+..++.+|+.+++..|.+.|.+|
T Consensus 96 ~~~~~~v~~ll~~A~~l~i~~L~~~C~~~ 124 (125)
T 3ohu_A 96 LLSRENIREVIRCAEFLRMHNLEDSCFSF 124 (125)
T ss_dssp EECTTTHHHHHHHHHHHTBSSCTTSSCCC
T ss_pred EECHHHHHHHHHHHHHhCCHHHHHHHHHh
Confidence 57789999999999999999998888665
No 398
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=26.04 E-value=8.8e+02 Score=28.69 Aligned_cols=163 Identities=10% Similarity=-0.005 Sum_probs=88.9
Q ss_pred eEEEEECCCCcEEEcccCCCCCCCcceEEEEE---C--CEEEEEeec-CC----CCccceEEEEECCCCcEEEeCCCCCC
Q psy14726 364 FVETYDTRADRWVKIEQVDPMGPRAYHGTAVI---G--YNIYVIGGF-DG----NEYYNSCRCFNAVTKVWKEIAPMNFK 433 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~~~r~~~~~~~~---~--~~lyv~GG~-~~----~~~~~~v~~yd~~~~~W~~~~~~~~~ 433 (712)
.+..+||.+ |..+...++...-...+++.+ + ...+++|-. .. ......++.|+...++.+.+...+..
T Consensus 808 ~i~lidp~t--~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~ 885 (1158)
T 3ei3_A 808 NLLIIDQHT--FEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVK 885 (1158)
T ss_dssp EEEEEETTT--CCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEES
T ss_pred EEEEEeCCC--CeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcC
Confidence 456677764 433322233322223333433 1 355666642 11 11345688888877777766554444
Q ss_pred cceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCceEEcccCCcccc-ceeEEEECCEEEEEcccCCCCccCceEEee
Q psy14726 434 RCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQWSLIAPMNVERS-DASATTLQGKIYITGGFNGHNCLNSCEVYD 512 (712)
Q Consensus 434 r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd 512 (712)
-.-.+++.++|++.+.=| +.+.+|+...++.-....-..+.. .....+.++.|+| |-... .-.+..|+
T Consensus 886 g~v~al~~~~g~Lla~ig-------~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~v-gD~~~---Sv~~~~y~ 954 (1158)
T 3ei3_A 886 GAVYSMVEFNGKLLASIN-------STVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILV-GDLMR---SVLLLAYK 954 (1158)
T ss_dssp SCEEEEEEETTEEEEEET-------TEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEE-EESSB---CEEEEEEE
T ss_pred CcCEEEeeeCCEEEEEcC-------CEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEE-EEhhh---eEEEEEEE
Confidence 455677888998777655 578888877654222100000000 0122244676655 32211 12355689
Q ss_pred CCCCeeEEeCCCCCCCcceEEEEECCE
Q psy14726 513 PECNQWTLIEPMRHRRSGVSCIAYHEC 539 (712)
Q Consensus 513 ~~~~~W~~~~~~p~~r~~~~~~~~~~~ 539 (712)
+..++-..++.-..+|.-.++..+++.
T Consensus 955 ~~~~~L~~~a~D~~~~~vta~~~ld~~ 981 (1158)
T 3ei3_A 955 PMEGNFEEIARDFNPNWMSAVEILDDD 981 (1158)
T ss_dssp TTTTEEEEEEECCSCBCEEEEEEEETT
T ss_pred cCCCeEEEEEeecccccEEEEEEEccC
Confidence 999999999876777877777666443
No 399
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=25.47 E-value=7.1e+02 Score=27.39 Aligned_cols=67 Identities=3% Similarity=-0.037 Sum_probs=34.8
Q ss_pred ceEEEEECCCCcEEEcccCCCCCCC--cceEEEEE-CCEEEEEeecCC----CCccceEEEEECCCCcEEEeCC
Q psy14726 363 DFVETYDTRADRWVKIEQVDPMGPR--AYHGTAVI-GYNIYVIGGFDG----NEYYNSCRCFNAVTKVWKEIAP 429 (712)
Q Consensus 363 ~~v~~~d~~~~~W~~~~~~~~~~~r--~~~~~~~~-~~~lyv~GG~~~----~~~~~~v~~yd~~~~~W~~~~~ 429 (712)
..+..+|+.+++-..+-........ ........ +++..+++.... .....+++.||..+++...+..
T Consensus 36 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~ 109 (740)
T 4a5s_A 36 NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEER 109 (740)
T ss_dssp TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC
T ss_pred CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEccc
Confidence 3688999988875543221111110 11112222 554444444321 1223678999999998766654
No 400
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=24.22 E-value=2.2e+02 Score=28.35 Aligned_cols=100 Identities=10% Similarity=0.026 Sum_probs=48.9
Q ss_pred ceeEEeecCCC--ceEEccc----CCccccceeEEEECCEEEEEcccCCCCccCceEEeeCCCCeeEEeCCCC-----CC
Q psy14726 459 NSVEKYNYTEN--QWSLIAP----MNVERSDASATTLQGKIYITGGFNGHNCLNSCEVYDPECNQWTLIEPMR-----HR 527 (712)
Q Consensus 459 ~~v~~yd~~~~--~W~~~~~----~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p-----~~ 527 (712)
..++.+|..+. .|+.-.. +-..+.... ..++.+|++....+ ..++.||..++.|..--.+| .|
T Consensus 20 G~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~--~~~~~~~vv~p~~d----G~l~a~~~~~G~~~~~~~~~~lv~~SP 93 (339)
T 2be1_A 20 GGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSR--LETYETLIIEPFGD----GNIYYFNAHQGLQKLPLSIRQLVSTSP 93 (339)
T ss_dssp SCEEEEETTTTEEEEEECGGGSCCSEECCCSCT--TTSSEEEEECCSTT----TEEEEEETTTEEEEEEEEHHHHHTTCS
T ss_pred CeEEEEECCCCcEEEEecCCccCCcEEecCCcc--ccCCcEEEEEECCC----CEEEEEECCCCcEEeeeccccceeccc
Confidence 34677776665 4775432 111111111 13557777653221 35888998887765332222 11
Q ss_pred CcceEEEEE-------CCEEEEEcCCCCCCccceEEEEeCCCCc--EEEcC
Q psy14726 528 RSGVSCIAY-------HECIYVIGGFNGMSRMCNGEKYNPVTKT--WSQVP 569 (712)
Q Consensus 528 r~~~~~~~~-------~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~ 569 (712)
....+.-++ .+...++|+. ...++.+|..+++ |+.-.
T Consensus 94 ~~~~~~pvv~~~~~~~~~g~Vy~Gs~-----~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 94 LHLKTNIVVNDSGKIVEDEKVYTGSM-----RTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp EEEECC----------CCEEEEECEE-----EEEEEEEETTTCCEEEEEST
T ss_pred cccCCCceeecccccccCCEEEEEec-----CCEEEEEECCCCcEEEEEec
Confidence 111111112 3444444543 3578888988764 76643
No 401
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=23.17 E-value=6.1e+02 Score=25.87 Aligned_cols=142 Identities=12% Similarity=0.107 Sum_probs=75.0
Q ss_pred CEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEE-ECCeEEEEcccCCCCCCceeEEeecCCCceE---
Q psy14726 397 YNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAV-HHDVIYAMGGYNGQRRQNSVEKYNYTENQWS--- 472 (712)
Q Consensus 397 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~--- 472 (712)
+.||+.-.. ..++++|+.+++...+... . ..-..+++ .+|.||+..-.+ ......+..++... .|.
T Consensus 153 g~Lyv~D~~------~~I~~id~~~g~v~~~~~~-~-~~P~giavd~dG~lyVad~~~-~~~~~gv~~~~~~~-~~~~~~ 222 (433)
T 4hw6_A 153 DDLYWVGQR------DAFRHVDFVNQYVDIKTTN-I-GQCADVNFTLNGDMVVVDDQS-SDTNTGIYLFTRAS-GFTERL 222 (433)
T ss_dssp CEEEEECBT------SCEEEEETTTTEEEEECCC-C-SCEEEEEECTTCCEEEEECCS-CTTSEEEEEECGGG-TTCCEE
T ss_pred CEEEEEeCC------CCEEEEECCCCEEEEeecC-C-CCccEEEECCCCCEEEEcCCC-CcccceEEEEECCC-Ceeccc
Confidence 789987431 6799999999988877541 1 12233333 456798874321 11123355665532 222
Q ss_pred EcccCCccccceeEEEE--CCEEEEEcccCCCCccCceEEeeCCCCee-EEeCCCCCCCcceEEEEE-C-CEEEEEcCCC
Q psy14726 473 LIAPMNVERSDASATTL--QGKIYITGGFNGHNCLNSCEVYDPECNQW-TLIEPMRHRRSGVSCIAY-H-ECIYVIGGFN 547 (712)
Q Consensus 473 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~ 547 (712)
.++.+ ..-..+++- ++.||+.-.. ...+++||+.+..- +.+...........++.. + +.||+.--.
T Consensus 223 ~~~~~---~~P~giavd~~~G~lyv~d~~-----~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~- 293 (433)
T 4hw6_A 223 SLCNA---RGAKTCAVHPQNGKIYYTRYH-----HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG- 293 (433)
T ss_dssp EEEEC---SSBCCCEECTTTCCEEECBTT-----CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT-
T ss_pred ccccc---CCCCEEEEeCCCCeEEEEECC-----CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC-
Confidence 22222 112233332 6789986432 24699999986664 333211111112233333 3 459988532
Q ss_pred CCCccceEEEEeCC
Q psy14726 548 GMSRMCNGEKYNPV 561 (712)
Q Consensus 548 ~~~~~~~v~~yd~~ 561 (712)
...|+++|+.
T Consensus 294 ----~~~I~~~~~d 303 (433)
T 4hw6_A 294 ----KHCIYRVDYN 303 (433)
T ss_dssp ----TTEEEEEEBC
T ss_pred ----CCEEEEEeCC
Confidence 3578887654
No 402
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=22.93 E-value=1.7e+02 Score=28.22 Aligned_cols=96 Identities=13% Similarity=0.013 Sum_probs=45.7
Q ss_pred ceEEEEECCEEEEEeecCCCCccceEEEEECCCCcEEEeCCCCCCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCC
Q psy14726 389 YHGTAVIGYNIYVIGGFDGNEYYNSCRCFNAVTKVWKEIAPMNFKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTE 468 (712)
Q Consensus 389 ~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 468 (712)
.|++++.++.||.+|-....+.-.. .+.......+ ..-..|+++.-+|.+|.+|--... .+.. -....
T Consensus 112 ~hs~al~~G~v~~wG~n~~gqlg~~----~~~~~~i~~i----~~G~~~~~~l~~G~v~~wG~n~~g-qlg~---p~~~~ 179 (282)
T 3qhy_B 112 WASYALKDGKVIAWGDDSDGQTTVP----AEAQSGVTAL----DGGVYTALAVKNGGVIAWGDNYFG-QTTV---PAEAQ 179 (282)
T ss_dssp TEEEEEETTEEEEEECCTTSTTSCC----GGGGSSEEEE----EECSSEEEEEETTEEEEEECCTTS-TTSC---CGGGG
T ss_pred CEEEEEeCCeEEEecCCCCCcCCCC----ccCCCCeEEE----EcccCEEEEEECCEEEEecCCCCC-CCCC---ceecC
Confidence 3555555899999986432221000 0001111111 112346666669999999853311 1110 00001
Q ss_pred CceEEcccCCccccceeEEEECCEEEEEcccC
Q psy14726 469 NQWSLIAPMNVERSDASATTLQGKIYITGGFN 500 (712)
Q Consensus 469 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 500 (712)
.....+. .-..|+++.-++++|..|-..
T Consensus 180 ~~v~~i~----~G~~hs~al~~G~v~~wG~n~ 207 (282)
T 3qhy_B 180 SGVDDVA----GGIFHSLALKDGKVIAWGDNR 207 (282)
T ss_dssp SSEEEEE----ECSSEEEEEETTEEEEEECCT
T ss_pred CCeEEEE----ecCCEEEEEECCeEEEEECCC
Confidence 1222221 123455555789999998643
No 403
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=21.83 E-value=8.4e+02 Score=26.95 Aligned_cols=148 Identities=5% Similarity=-0.080 Sum_probs=80.6
Q ss_pred CceeEEeecCC--CceEEcccCCccccceeEEEECCEEEEEcccCC-----CCccCceEEeeCCC--------CeeEE-e
Q psy14726 458 QNSVEKYNYTE--NQWSLIAPMNVERSDASATTLQGKIYITGGFNG-----HNCLNSCEVYDPEC--------NQWTL-I 521 (712)
Q Consensus 458 ~~~v~~yd~~~--~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-----~~~~~~v~~yd~~~--------~~W~~-~ 521 (712)
.+.++..|... ..|..+ .+|. ...-....++++|+....+- ......+...|..+ ..|+. +
T Consensus 268 ~~~~~~~~~~~~~~~~~~l-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (711)
T 4hvt_A 268 NYDNYILDTKYKNLKLQKI-NMPS--DATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILF 344 (711)
T ss_dssp CEEEEEEECSSSSCEEEEC-CSCT--TCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEE
T ss_pred ceeEEEEcCCCCCCcceEe-ecCC--cceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEE
Confidence 46778777653 567777 3332 22224566999999765431 12345688887654 46886 4
Q ss_pred CCCCCCCcceEEEEECCEEEEEcCCCCCCccceEEEEeCCCCcEEEc--CCCCCCccceEEEEE---CCEEEEE-cccCC
Q psy14726 522 EPMRHRRSGVSCIAYHECIYVIGGFNGMSRMCNGEKYNPVTKTWSQV--PDMYNPRSNFAIEVI---DDMIFAI-GGFNG 595 (712)
Q Consensus 522 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~--~~~p~~r~~~~~~~~---~~~i~v~-GG~~~ 595 (712)
.+- ..+.--.....++.||+..-.++ ...+.++|+.++.|... ..+|.. ...+.... ++.+++. .+..
T Consensus 345 ~~~-~~~~l~~~~~~~~~l~~~~~~~~---~~~l~~~~~~~g~~~~~~~i~lp~~-~~~~~~~~~~~~~~~~~~~ss~~- 418 (711)
T 4hvt_A 345 TPT-ANEVFNFISTTKDRVFLATYDNV---VAKVVTFTLENEQWTKPVVLKLPYQ-NAIFGMSSYEEEEEALITIENSI- 418 (711)
T ss_dssp CCC-TTEEEEEEEECSSCEEEEEEETT---EEEEEEECEETTEECCCEEECCCST-TCEEEEECCTTCSCEEEEEECSS-
T ss_pred CCC-CCCeEEEEEEECCEEEEEEEECC---EEEEEEEECCCCceEEEeccCCCCC-eEEEEEeecCcCCEEEEEEecCC-
Confidence 332 22333344555777777643221 35688999888888432 233422 11222222 2334433 3322
Q ss_pred CceeeeEEEEECCCCeEEEccC
Q psy14726 596 VTTIYHVECYDEKTDEWYEATD 617 (712)
Q Consensus 596 ~~~~~~v~~yd~~~~~W~~~~~ 617 (712)
.-..++.||+. ++++.+..
T Consensus 419 --~P~~~~~~d~~-~~~~~l~~ 437 (711)
T 4hvt_A 419 --VPPTIYLWVKT-HELKIIRK 437 (711)
T ss_dssp --SCCEEEEECTT-SCEEEEEC
T ss_pred --CCCEEEEEeCC-CcEEEEec
Confidence 22468889987 77776643
No 404
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=20.38 E-value=8.2e+02 Score=26.31 Aligned_cols=163 Identities=12% Similarity=0.013 Sum_probs=84.0
Q ss_pred eEEEEECCCCcEEEcccCCCC-CCCcceEEEEE-CCEEEEEeecCCCCccceEEEEECCCCc--------EEEeCC-CC-
Q psy14726 364 FVETYDTRADRWVKIEQVDPM-GPRAYHGTAVI-GYNIYVIGGFDGNEYYNSCRCFNAVTKV--------WKEIAP-MN- 431 (712)
Q Consensus 364 ~v~~~d~~~~~W~~~~~~~~~-~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~--------W~~~~~-~~- 431 (712)
.+..+|... .+..+. ...+ ..+..++++.. +++.++.||.+ ..+..||..++. ...+.. ..
T Consensus 108 ~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D-----GtVkIWd~~~~~l~~~~~i~l~ti~~~~~g 180 (588)
T 2j04_A 108 NVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED-----GELQFFSIRKNSENTPEFYFESSIRLSDAG 180 (588)
T ss_dssp CEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETT-----SEEEEEECCCCTTTCCCCEEEEEEECSCTT
T ss_pred cEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCC-----CEEEEEECCCCccccccceeeeeeeccccc
Confidence 466677433 444433 2222 13455666655 88888888864 358899988864 233211 11
Q ss_pred CCcceeEEEEECCeEEEEcccCCCCCCceeEEeecCCCc----eEEcccCCccccceeEEEECCEEEEEcccCCCCccCc
Q psy14726 432 FKRCYVSTAVHHDVIYAMGGYNGQRRQNSVEKYNYTENQ----WSLIAPMNVERSDASATTLQGKIYITGGFNGHNCLNS 507 (712)
Q Consensus 432 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~----W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 507 (712)
....-.+++...+. ++.||.+ +.+..+|..++. |..+.+.... .-.+++..+ ...+.++ + .+
T Consensus 181 h~~~V~sVawSPdg-Laass~D-----~tVrlWd~~~~~~~~~~~tL~~~h~~-~V~svaFsg-~~LASa~-~-----~t 246 (588)
T 2j04_A 181 SKDWVTHIVWYEDV-LVAALSN-----NSVFSMTVSASSHQPVSRMIQNASRR-KITDLKIVD-YKVVLTC-P-----GY 246 (588)
T ss_dssp CCCCEEEEEEETTE-EEEEETT-----CCEEEECCCSSSSCCCEEEEECCCSS-CCCCEEEET-TEEEEEC-S-----SE
T ss_pred ccccEEEEEEcCCc-EEEEeCC-----CeEEEEECCCCccccceeeecccccC-cEEEEEEEC-CEEEEEe-C-----Ce
Confidence 11233445555555 6666643 568888887765 3333222111 112222234 4444444 1 47
Q ss_pred eEEeeCCCCeeEEeCCCCCCCcceEEEE---ECCEEEEEcCCCC
Q psy14726 508 CEVYDPECNQWTLIEPMRHRRSGVSCIA---YHECIYVIGGFNG 548 (712)
Q Consensus 508 v~~yd~~~~~W~~~~~~p~~r~~~~~~~---~~~~iyv~GG~~~ 548 (712)
+..||..++.=....- ...-.-..++. -++...++++.++
T Consensus 247 IkLWd~~~~~~~~~~~-gh~~~V~~va~~~s~d~~~La~a~edG 289 (588)
T 2j04_A 247 VHKIDLKNYSISSLKT-GSLENFHIIPLNHEKESTILLMSNKTS 289 (588)
T ss_dssp EEEEETTTTEEEEEEC-SCCSCCCEEEETTCSSCEEEEECSSCE
T ss_pred EEEEECCCCeEEEEEc-CCCceEEEEEeeeCCCCCEEEEEcCCC
Confidence 9999988877633331 11111222232 2456777777554
No 405
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=20.32 E-value=2.7e+02 Score=20.59 Aligned_cols=65 Identities=11% Similarity=-0.019 Sum_probs=45.2
Q ss_pred HHHHHHHHHhhcccCChhhHHHHHHHHHHcccHHHHHHHHHHHHHHHHHhhcCccccccCCHHHHHhh
Q psy14726 178 SKAQDLCCDFIKRLTTPRNCFGILLFSRDHFCKKLEEWTRKYILRNFVDVARESEEIVFISEQELEEI 245 (712)
Q Consensus 178 ~~L~~~c~~~l~~~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~l~~~~~~f~~l~~~~l~~l 245 (712)
..+++..++++ .+-+.++....+.-.-..-=..+...|..++.++...+.. . -....+++.++.-
T Consensus 8 ~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~~~~~~C~~~V~~y~~~Ii~-~-L~~~~~P~~IC~~ 72 (74)
T 1l9l_A 8 LTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRSRWRDVCRNFMRRYQSRVIQ-G-LVAGETAQQICED 72 (74)
T ss_dssp HHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHHHHHHH-H-HHTTCCHHHHHGG
T ss_pred HHHHHHHHHHh-cccCHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH-H-HHhCCCHHHHHhh
Confidence 34566677777 7778888777776555554466999999999999988872 1 1235677776653
No 406
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=20.16 E-value=3.6e+02 Score=26.92 Aligned_cols=106 Identities=9% Similarity=0.032 Sum_probs=54.3
Q ss_pred CCEEEEEcccCCCCccCceEEeeCCCCeeE---EeCCCCCCCcceEEEEE----------CCEEEEEcCCCCCCccceEE
Q psy14726 490 QGKIYITGGFNGHNCLNSCEVYDPECNQWT---LIEPMRHRRSGVSCIAY----------HECIYVIGGFNGMSRMCNGE 556 (712)
Q Consensus 490 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~---~~~~~p~~r~~~~~~~~----------~~~iyv~GG~~~~~~~~~v~ 556 (712)
++.+.+.|+.+ .++..+|..+..-. .+..+..-......+.+ ++++++.||.+ ..+.
T Consensus 100 ~~~~las~~~d-----~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D-----~tv~ 169 (393)
T 4gq1_A 100 YSLFLACVCQD-----NTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD-----CTLI 169 (393)
T ss_dssp EEEEEEEEETT-----SCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT-----SEEE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECC-----CeEE
Confidence 34455566554 35666776665432 23333321112222222 67888998875 4677
Q ss_pred EEeCCCCcEEE-cCCCCCCccceEEEEE-CC-EEEEEcccCCCceeeeEEEEECCCCeE
Q psy14726 557 KYNPVTKTWSQ-VPDMYNPRSNFAIEVI-DD-MIFAIGGFNGVTTIYHVECYDEKTDEW 612 (712)
Q Consensus 557 ~yd~~~~~W~~-~~~~p~~r~~~~~~~~-~~-~i~v~GG~~~~~~~~~v~~yd~~~~~W 612 (712)
.+|..+..=.. +.... ....+++.. ++ .+++.|+.++ .+.+||..+++-
T Consensus 170 ~Wd~~~~~~~~~~~~~~--~~v~~v~~~p~~~~~l~~~~~d~-----~v~~wd~~t~~~ 221 (393)
T 4gq1_A 170 IWRLTDEGPILAGYPLS--SPGISVQFRPSNPNQLIVGERNG-----NIRIFDWTLNLS 221 (393)
T ss_dssp EEEEETTEEEEEEEECS--SCEEEEEEETTEEEEEEEEETTS-----EEEEEETTCCC-
T ss_pred EEECCCCceeeeecCCC--CCcEEEEECCCCCceEEecCCCC-----EEEEEECCCCcc
Confidence 77875543111 11111 112233333 34 4777787665 578888877643
Done!