BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14728
(319 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|158298793|ref|XP_318952.3| AGAP009839-PA [Anopheles gambiae str. PEST]
gi|157014056|gb|EAA14303.4| AGAP009839-PA [Anopheles gambiae str. PEST]
Length = 329
Score = 330 bits (846), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 168/259 (64%), Positives = 208/259 (80%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ERL LRWNLIKKIEN+ LT+L ELELYDNQ+T +ENLD L+NLE+LD+SFNR+ +IK
Sbjct: 70 LERLYLRWNLIKKIENLDHLTSLLELELYDNQITELENLDNLVNLEMLDVSFNRLHQIKN 129
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL KL+LC+N+IS IEN+DH L +LELGDNKIR IENLD L++L LYLGKNK
Sbjct: 130 LSALTNLRKLFLCANRISLIENLDHFSSLTMLELGDNKIRKIENLDNLSSLTHLYLGKNK 189
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL L KL LSLQCNRL IENL+ L NLT+LYLSENG+ TIENL N++LETL
Sbjct: 190 ITKIENLDKLVKLECLSLQCNRLTKIENLDQLVNLTELYLSENGIETIENLDQNKQLETL 249
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N++ I+NI HL L+EFW+NDN VS+W V+ L +NK+L T+YL+RNPVA D NY
Sbjct: 250 DLAKNRVKRIENIEHLEMLEEFWMNDNGVSEWTCVDKLASNKKLATVYLERNPVASDVNY 309
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+KL PW+ +IDATL
Sbjct: 310 RRKLKLAVPWLQKIDATLC 328
>gi|270012286|gb|EFA08734.1| hypothetical protein TcasGA2_TC006409 [Tribolium castaneum]
Length = 322
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/259 (65%), Positives = 208/259 (80%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IERL LRWNLI KIEN+ L TL+ELELYDNQ+ +ENL L+NLEILDLSFNRI+EI+G
Sbjct: 62 IERLFLRWNLITKIENLDTLVTLRELELYDNQIVKMENLGCLVNLEILDLSFNRIKEIEG 121
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L++L NLEKL+L SNKISKI+NV HL+KL +LELGDNKIR IENL+ + L LYLGKNK
Sbjct: 122 LENLHNLEKLFLSSNKISKIKNVKHLQKLTMLELGDNKIRDIENLENMPALTHLYLGKNK 181
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS+I NL SLT + LSLQ NR+ IENL+ LT LT+LY+SENG+ IENL N L+TL
Sbjct: 182 ISKIKNLDSLTNVTCLSLQSNRITRIENLDKLTQLTELYISENGIHKIENLTHNTLLQTL 241
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A NKI +I+NI HL +L+EFW+NDN+VSDW TV L NK+L T+YL+RNP+ +DP Y
Sbjct: 242 DLAKNKIKLIENIEHLNDLEEFWMNDNEVSDWGTVENLSKNKKLATVYLERNPLEKDPMY 301
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+K++ P + QIDATL
Sbjct: 302 RRKLKMIAPSLTQIDATLC 320
>gi|91088689|ref|XP_974981.1| PREDICTED: similar to phosphatase 1 regulatory subunit 7 [Tribolium
castaneum]
Length = 320
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 169/259 (65%), Positives = 208/259 (80%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IERL LRWNLI KIEN+ L TL+ELELYDNQ+ +ENL L+NLEILDLSFNRI+EI+G
Sbjct: 60 IERLFLRWNLITKIENLDTLVTLRELELYDNQIVKMENLGCLVNLEILDLSFNRIKEIEG 119
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L++L NLEKL+L SNKISKI+NV HL+KL +LELGDNKIR IENL+ + L LYLGKNK
Sbjct: 120 LENLHNLEKLFLSSNKISKIKNVKHLQKLTMLELGDNKIRDIENLENMPALTHLYLGKNK 179
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS+I NL SLT + LSLQ NR+ IENL+ LT LT+LY+SENG+ IENL N L+TL
Sbjct: 180 ISKIKNLDSLTNVTCLSLQSNRITRIENLDKLTQLTELYISENGIHKIENLTHNTLLQTL 239
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A NKI +I+NI HL +L+EFW+NDN+VSDW TV L NK+L T+YL+RNP+ +DP Y
Sbjct: 240 DLAKNKIKLIENIEHLNDLEEFWMNDNEVSDWGTVENLSKNKKLATVYLERNPLEKDPMY 299
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+K++ P + QIDATL
Sbjct: 300 RRKLKMIAPSLTQIDATLC 318
>gi|157115257|ref|XP_001658167.1| protein phosphatases pp1 regulatory subunit [Aedes aegypti]
gi|108883490|gb|EAT47715.1| AAEL001166-PA [Aedes aegypti]
Length = 332
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 167/261 (63%), Positives = 207/261 (79%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V +ERL LRWNLIKKIEN+ L L+ELELYDNQ+T +ENLD L+NLE+LD+SFNRI +I
Sbjct: 71 VNLERLYLRWNLIKKIENLDHLIALQELELYDNQITKLENLDNLVNLEVLDISFNRIHKI 130
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
+ LD L L KLYLC+NKIS IEN+ HL L +LELGDNK+R I++LD LTNL +LYLGK
Sbjct: 131 ENLDRLVKLSKLYLCANKISVIENIGHLSNLTMLELGDNKLRKIQHLDTLTNLTKLYLGK 190
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
NKI++I+NL L L LSLQCNRL IENL+ L NLT+LYLSENG+ IENL N++L+
Sbjct: 191 NKITKIENLDKLVNLECLSLQCNRLVKIENLDKLVNLTELYLSENGIEKIENLDHNKQLD 250
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDP 298
TLD+A N+I I+N+AHL L+EFW+NDN VSDW V+VL NK+L T+YL+RNP+A D
Sbjct: 251 TLDLAKNRIKTIENVAHLECLEEFWMNDNSVSDWTCVDVLAANKKLATVYLERNPIASDS 310
Query: 299 NYRRKIKLVCPWIVQIDATLA 319
YR+K+KL PW+ QIDATL
Sbjct: 311 TYRKKLKLAIPWLTQIDATLC 331
>gi|312383578|gb|EFR28617.1| hypothetical protein AND_03257 [Anopheles darlingi]
Length = 329
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 163/259 (62%), Positives = 204/259 (78%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ERL LRWNLIKKIEN+ LT+L ELELYDNQ+T +ENLD L+NLE+LD+SFNR+REIK
Sbjct: 70 LERLCLRWNLIKKIENLDHLTSLLELELYDNQITELENLDQLVNLEVLDVSFNRLREIKN 129
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ L L +L+LC+N+IS IEN+D L +LELGDNK+R +ENLD LTNL LY+GKNK
Sbjct: 130 ISALTKLRQLFLCANRISLIENLDSFSNLTMLELGDNKLRKLENLDHLTNLTHLYIGKNK 189
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL L KL LSLQCNRL +ENLE L NLT+LY+SENG+ +ENL N+ LETL
Sbjct: 190 ITKIENLDKLVKLECLSLQCNRLTKLENLENLVNLTELYVSENGIEKLENLEQNKLLETL 249
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
DV N+I I+NI HL L+EFW+NDN VS+W+ V+ L NK+L T+YL+RNPVA D NY
Sbjct: 250 DVGKNRIQRIENIGHLQALEEFWMNDNAVSEWSCVDRLAENKKLATVYLERNPVASDVNY 309
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+KL PW+ +IDATL
Sbjct: 310 RRKLKLAVPWLQKIDATLC 328
>gi|240849085|ref|NP_001155729.1| protein phosphatases pp1 regulatory subunit-like [Acyrthosiphon
pisum]
gi|239792184|dbj|BAH72462.1| ACYPI007814 [Acyrthosiphon pisum]
Length = 329
Score = 319 bits (818), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 167/259 (64%), Positives = 207/259 (79%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L LRWN IKKIENI ML +L EL+LYDNQ+T IENL +LINL++LDLSFNRI+EI+G
Sbjct: 70 LRSLCLRWNHIKKIENIQMLVSLNELDLYDNQITKIENLSSLINLKVLDLSFNRIKEIEG 129
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+HL NLEKLYL SN+I+KI NV+HL L++LELGDNKI+ IEN+D LT L ELY GKNK
Sbjct: 130 LEHLINLEKLYLSSNRITKITNVNHLLNLQMLELGDNKIKTIENIDCLTGLTELYFGKNK 189
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
+++I NL +L L ILSLQ N L IENL LT+L +LYLSEN +T IENL N L TL
Sbjct: 190 VNKIQNLDTLINLKILSLQNNSLTKIENLNKLTSLDELYLSENRITVIENLEDNINLGTL 249
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D++ NKIS I+NI HL +L E WINDN+++DWN+V +LE+ K+L+TIYL+ NP+ +D Y
Sbjct: 250 DLSMNKISKIENITHLQKLTELWINDNKINDWNSVQILEHMKKLETIYLEHNPLIKDSAY 309
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKIKL+ PWI QIDATLA
Sbjct: 310 RRKIKLIMPWIAQIDATLA 328
>gi|156548260|ref|XP_001599951.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Nasonia
vitripennis]
Length = 318
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 166/259 (64%), Positives = 205/259 (79%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I++L WNLIKKIEN+ L TL ELEL DNQ+TVIENLD L NL+ LDLSFNRI++I+
Sbjct: 59 IKKLCFTWNLIKKIENLDTLQTLVELELRDNQITVIENLDALKNLQSLDLSFNRIKKIEN 118
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD+L +L+KL++ SN+I+KIENV HLK L +LELGDNKIR IENLDGL NL L+LGKNK
Sbjct: 119 LDNLVSLQKLFISSNRITKIENVAHLKNLTMLELGDNKIREIENLDGLDNLTSLFLGKNK 178
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS+I NL +L L +L LQCNR+ IENL L L QLYLSENGLT IE L + K+ TL
Sbjct: 179 ISKIRNLENLKNLTLLILQCNRIVCIENLTELVKLEQLYLSENGLTQIEGLENCTKISTL 238
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A NKI I NI HLTEL+EFWIN+N++ DW+T+++L +NK+L TIYL+ NP+A+D NY
Sbjct: 239 DLAQNKIKKISNIQHLTELEEFWINNNEIEDWSTIDILTSNKKLATIYLEHNPIAKDANY 298
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKIKL PW+ Q+DATL
Sbjct: 299 RRKIKLALPWLTQLDATLC 317
>gi|170049759|ref|XP_001858337.1| phosphatase 1 regulatory subunit 7 [Culex quinquefasciatus]
gi|167871497|gb|EDS34880.1| phosphatase 1 regulatory subunit 7 [Culex quinquefasciatus]
Length = 321
Score = 313 bits (802), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 159/261 (60%), Positives = 204/261 (78%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V +ERL +RWNLIKKIEN+ LT L+ELELYDNQ+T +ENL+ L+NLE+LD+SFNR+ +I
Sbjct: 60 VNLERLYMRWNLIKKIENLDHLTELQELELYDNQITELENLNCLVNLEMLDVSFNRLHKI 119
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
+ L+ L L KL+LC+NKIS IENV HL L +LELGDNKIR I+NL+ LTNL LYLGK
Sbjct: 120 QNLEELTKLRKLFLCANKISTIENVGHLSNLTMLELGDNKIRKIQNLESLTNLTHLYLGK 179
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
NKI++I+NL L KL LSLQ NR+ +ENL+ L NLT+LY+SENG+ IENL N+ LE
Sbjct: 180 NKINKIENLDQLVKLECLSLQSNRIVKLENLDKLVNLTELYISENGIERIENLAENKALE 239
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDP 298
TLD+A N++ +++N+ HL L+E W+NDN VSDWN V VL NK+L T+YL+RNP+A D
Sbjct: 240 TLDLAKNRVKVLENLDHLACLEELWMNDNAVSDWNCVTVLAQNKKLATVYLERNPLAGDV 299
Query: 299 NYRRKIKLVCPWIVQIDATLA 319
YR K+KL PW+ +IDATL
Sbjct: 300 TYRNKLKLAVPWLTKIDATLC 320
>gi|307213325|gb|EFN88777.1| Protein phosphatase 1 regulatory subunit 7 [Harpegnathos saltator]
Length = 322
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/311 (57%), Positives = 220/311 (70%), Gaps = 11/311 (3%)
Query: 11 EVDNDNLVTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVC--IERLLLRW 68
EVDN E E +++ + +PD E E + SK E+ E I RL W
Sbjct: 16 EVDN--------EGEETEEADKILIIDPDSE-ELDFNHSKLTKLENLEPLTQIRRLCFTW 66
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
NLIKKIEN+ LTTL ELEL DNQ+ IENLD L+NLE+LDLSFNRI++I+GLD+L NL+
Sbjct: 67 NLIKKIENLDTLTTLVELELRDNQIMTIENLDVLVNLELLDLSFNRIKKIEGLDNLLNLQ 126
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
KL+L SNKIS IEN+ HL L LELGDNKIR IENL+GL L LYLGKNKI++I NL
Sbjct: 127 KLFLSSNKISHIENILHLVNLTTLELGDNKIREIENLEGLQKLINLYLGKNKITKIQNLE 186
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
SL L +LSLQ NR+ IEN+E L L QLYLSENG+T IE + + L TLD+A NKI
Sbjct: 187 SLQDLTLLSLQSNRIVKIENIEELRKLDQLYLSENGITCIEGIENCSGLTTLDLANNKIK 246
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVC 308
IQNI HL L+EFW+N+N++ DWNT+ L NK L+TIYL+ NPVA++PNYRRKI L+
Sbjct: 247 KIQNIDHLESLEEFWMNNNEIEDWNTLENLTANKNLRTIYLEHNPVAKEPNYRRKIMLLL 306
Query: 309 PWIVQIDATLA 319
PW+ Q+DATL
Sbjct: 307 PWLEQLDATLC 317
>gi|307168558|gb|EFN61616.1| Protein phosphatase 1 regulatory subunit 7 [Camponotus floridanus]
Length = 327
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 164/259 (63%), Positives = 199/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I RL WNLIKKIEN+ MLTTL ELEL DNQ+ IENLD L+NLE+LDLSFNRI++I+G
Sbjct: 59 IRRLCFTWNLIKKIENLDMLTTLVELELRDNQIINIENLDALVNLELLDLSFNRIKKIEG 118
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L NL+KL+L SNKI IENV HL L LELGDNKIR IENL+GL L LYLGKNK
Sbjct: 119 LSNLLNLQKLFLSSNKILHIENVSHLTNLTTLELGDNKIREIENLEGLQKLTNLYLGKNK 178
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I NL SL L +LSLQ NR+ IEN+E L L QLYLSENG+T IE + + L TL
Sbjct: 179 ITKIQNLESLENLTLLSLQSNRITKIENIEELKKLDQLYLSENGITCIEGIENCSGLTTL 238
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A NKI IQN+ HL L+EFW+N+N++ DWNT+ L NK+LQT+YL+ NP+A+DPNY
Sbjct: 239 DLANNKIKKIQNMNHLENLEEFWMNNNEIEDWNTLENLRVNKKLQTVYLEHNPIAKDPNY 298
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L+ PW+ Q+DATL
Sbjct: 299 RRKIMLLLPWLEQLDATLC 317
>gi|383850206|ref|XP_003700688.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like
[Megachile rotundata]
Length = 315
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 177/300 (59%), Positives = 224/300 (74%), Gaps = 3/300 (1%)
Query: 22 VEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVC--IERLLLRWNLIKKIENIHM 79
+E EN ++ + +PD E E + S+ E+ E I +L WNLIKKIEN+
Sbjct: 16 IEENENDDAEKILIIDPDSE-ELDFNHSRLTKLENLEPLRQIRKLCFTWNLIKKIENLDT 74
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
LTTL ELEL DNQ+ VIENLD L+NLE+LDLSFNRI++I+GL++L+NL+KL+L SNKI
Sbjct: 75 LTTLVELELRDNQIVVIENLDALVNLELLDLSFNRIKKIEGLENLSNLQKLFLSSNKIQC 134
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
IEN+ HLK L LELGDNKIR I NL+GL NL L+LGKNKI++IDNL L L +LSLQ
Sbjct: 135 IENLSHLKNLTTLELGDNKIRDIVNLEGLDNLTSLFLGKNKITKIDNLGCLQNLQLLSLQ 194
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
NR+ IENLE L L QLYLSENG+T IE LLS +L TLD+A NKI IQNI HL EL
Sbjct: 195 SNRITKIENLEELKKLDQLYLSENGITCIEGLLSCLELTTLDLANNKIKKIQNIDHLEEL 254
Query: 260 QEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDATLA 319
+EFWIN+N++ +W T+ L NK+LQT+YL+ NP+A+DPNYRRK+KL+ PW++Q+DATL
Sbjct: 255 KEFWINNNEIEEWTTIENLTANKKLQTVYLEHNPIAKDPNYRRKMKLLLPWLIQLDATLC 314
>gi|322801630|gb|EFZ22271.1| hypothetical protein SINV_14234 [Solenopsis invicta]
Length = 323
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 160/259 (61%), Positives = 198/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL WNLIKKIEN+ LT+L ELEL DNQ+ IENLD L+NLE+LDLSFNRI++I+G
Sbjct: 55 VRRLCFTWNLIKKIENLDTLTSLVELELRDNQIVAIENLDALVNLELLDLSFNRIKKIEG 114
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L NL+KL+L SNKI +IENV HL L LELGDNKIR IENL+ L L LYLGKNK
Sbjct: 115 LGNLLNLQKLFLSSNKILQIENVGHLVNLTTLELGDNKIREIENLESLDKLTNLYLGKNK 174
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I NL SL L +LSLQ NR+ IEN+E L L QLYLSENG+T IE + + L TL
Sbjct: 175 ITKIQNLDSLKDLTLLSLQSNRITKIENIEELKKLDQLYLSENGITCIEGIENCPGLTTL 234
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A NKI IQN+ HL L+EFW+N+N++ DWNT+ L NK+LQT+YL+ NP+A+DPNY
Sbjct: 235 DLANNKIKKIQNVDHLENLEEFWMNNNEIEDWNTLESLTANKKLQTVYLEHNPIAKDPNY 294
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L+ PW+ Q+DATL
Sbjct: 295 RRKIMLLLPWLEQLDATLC 313
>gi|321467442|gb|EFX78432.1| hypothetical protein DAPPUDRAFT_213002 [Daphnia pulex]
Length = 316
Score = 297 bits (760), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 159/259 (61%), Positives = 205/259 (79%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L LRWNLIKKIENI ML+TL+ELELYDNQ+T IENL +L+NLE+LDLSFNRI+ I+G
Sbjct: 57 VEGLYLRWNLIKKIENIGMLSTLRELELYDNQITEIENLGSLVNLELLDLSFNRIKTIQG 116
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L NL+KL+L SN+I KIEN+ LK+L++LELGDN+IR+IENLD LTNLE L+LGKNK
Sbjct: 117 LDTLVNLKKLFLVSNRIEKIENLSKLKELQMLELGDNRIRVIENLDELTNLESLFLGKNK 176
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++++NL SL+KL +LS+Q NR+ TI N++ L NL +LYLS NG+ IENL +N KL+TL
Sbjct: 177 ITQLNNLQSLSKLKLLSIQSNRIVTIANIDKLVNLEELYLSHNGIQVIENLENNTKLQTL 236
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I +IQ + L L+EFW NDN V DWN ++ L L T+Y +RNP+ +D NY
Sbjct: 237 DLAGNRIKLIQGLDTLGNLEEFWFNDNLVEDWNQLDGLRGATTLLTVYFERNPIQKDVNY 296
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKIK+ P + QIDA L
Sbjct: 297 RRKIKMALPSLTQIDAALC 315
>gi|350399832|ref|XP_003485653.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Bombus
impatiens]
Length = 318
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 165/259 (63%), Positives = 203/259 (78%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I RL WNLIKKIEN+ LTTL ELEL DNQ+ VIENLD L+NL++LDLSFNRI++I+G
Sbjct: 59 IHRLCFTWNLIKKIENLDTLTTLVELELRDNQIVVIENLDALVNLKLLDLSFNRIKKIEG 118
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD+L NL+KLYL SNKI IEN+ HLK L +LELGDNKIR I NL+ L NL L+LGKNK
Sbjct: 119 LDNLLNLQKLYLSSNKIQCIENLSHLKNLTILELGDNKIREIINLEALENLTSLFLGKNK 178
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL L L +LSLQ NR+ IENL+ L NL QLYLSENG+T I L + K+ T
Sbjct: 179 IAKIENLDCLQNLQLLSLQSNRIIEIENLDELKNLDQLYLSENGITCIRGLSNCTKVTTF 238
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A NKI I+NI HL +L+EFWIN+N++ DW TV L NK+LQT+YL+ NP+A+DPNY
Sbjct: 239 DLANNKIKKIENIEHLEDLEEFWINNNEIEDWTTVENLAVNKKLQTVYLEHNPIAKDPNY 298
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKIKL+ PW+VQ+DATL
Sbjct: 299 RRKIKLLLPWLVQLDATLC 317
>gi|340712496|ref|XP_003394795.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Bombus
terrestris]
Length = 318
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 164/259 (63%), Positives = 203/259 (78%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I RL WNLIKKIEN+ LTTL ELEL DNQ+ VIENLD L+NL++LDLSFNRI++I+G
Sbjct: 59 IHRLCFTWNLIKKIENLDTLTTLVELELRDNQIVVIENLDALVNLKLLDLSFNRIKKIEG 118
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD+L NL+KLYL SNKI IEN+ HLK L +LELGDNKIR I NL+ L NL L+LGKNK
Sbjct: 119 LDNLLNLQKLYLSSNKIQCIENLSHLKNLTILELGDNKIREIINLEALENLTSLFLGKNK 178
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL L L +LSLQ NR+ IENL+ L +L QLYLSENG+T I L + K+ T
Sbjct: 179 IAKIENLGCLQNLQLLSLQSNRIIEIENLDELKDLDQLYLSENGITCIRGLSNCTKVTTF 238
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A NKI I+NI HL +L+EFWIN+N++ DW TV L NK+LQT+YL+ NP+A+DPNY
Sbjct: 239 DLANNKIKKIENIEHLEDLEEFWINNNEIEDWTTVENLAVNKKLQTVYLEHNPIAKDPNY 298
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKIKL+ PW+VQ+DATL
Sbjct: 299 RRKIKLLLPWLVQLDATLC 317
>gi|195056021|ref|XP_001994911.1| GH13488 [Drosophila grimshawi]
gi|193892674|gb|EDV91540.1| GH13488 [Drosophila grimshawi]
Length = 328
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/259 (60%), Positives = 199/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IERL LRWNLIKKIEN+ MLTTL ELELYDNQ+T IENLD L NLEILDLSFNR+ +I+
Sbjct: 63 IERLYLRWNLIKKIENLEMLTTLVELELYDNQITQIENLDKLDNLEILDLSFNRLTKIEN 122
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L LEKLY +NK++ IENV L L +LELGDNK++ IEN++ L NL +L+LGKNK
Sbjct: 123 LDKLMKLEKLYFVANKLTVIENVGMLTNLTMLELGDNKLKKIENIETLVNLRQLFLGKNK 182
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I +I+NL +L L ILSLQ NR+ IENLE LTNL +LYLSENG+ TIENL N+ L+TL
Sbjct: 183 IGKIENLETLVNLEILSLQANRIIKIENLEKLTNLQELYLSENGIETIENLSENKSLDTL 242
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N++ +I N+ L +L+E W+NDN ++DW + VL+ NK L+TIYL+ NPVA D Y
Sbjct: 243 DLAKNRLKLIGNLEALDQLEEIWLNDNGIADWKNLEVLKENKSLKTIYLEHNPVATDIRY 302
Query: 301 RRKIKLVCPWIVQIDATLA 319
R K++ + P + +IDATL
Sbjct: 303 RSKLRDILPQLQKIDATLC 321
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 22/132 (16%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V + +L L N I KIEN+ L L+ L L N++ IENL+
Sbjct: 171 VNLRQLFLGKNKIGKIENLETLVNLEILSLQANRIIKIENLEK----------------- 213
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L NL++LYL N I IEN+ K L L+L N++++I NL+ L LEE++L
Sbjct: 214 -----LTNLQELYLSENGIETIENLSENKSLDTLDLAKNRLKLIGNLEALDQLEEIWLND 268
Query: 179 NKISRIDNLASL 190
N I+ NL L
Sbjct: 269 NGIADWKNLEVL 280
>gi|363736976|ref|XP_422655.3| PREDICTED: protein phosphatase 1 regulatory subunit 7 [Gallus
gallus]
Length = 349
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/259 (56%), Positives = 200/259 (77%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NL+K+IEN+ L TL+EL+LYDNQ+ IENL+ L++LE+LD+SFN +R I+G
Sbjct: 89 VKTLCLRQNLVKRIENLEQLQTLRELDLYDNQIRKIENLEALVDLEVLDISFNVLRHIEG 148
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L L+KL+L +NKISKIEN+ +L+ L++LELG N+IR IEN+D LTNL+ L+LGKNK
Sbjct: 149 LDQLTQLKKLFLVNNKISKIENLSNLQLLQMLELGSNRIRAIENIDTLTNLDSLFLGKNK 208
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 209 ITKLQNLDALTNLTVLSIQSNRLTKIEGLQSLVNLRELYLSNNGIEVIEGLENNNKLTML 268
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN V W+ ++ L+ K L+T+YL+RNP+ +DP Y
Sbjct: 269 DIASNRIKKIENISHLTELQEFWMNDNLVESWSDLDELKGAKNLETVYLERNPLQKDPQY 328
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 329 RRKIMLALPSVRQIDATFV 347
>gi|380016954|ref|XP_003692432.1| PREDICTED: LOW QUALITY PROTEIN: protein phosphatase 1 regulatory
subunit 7-like [Apis florea]
Length = 318
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/259 (62%), Positives = 202/259 (77%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I RL WNLIKKIEN+ LTTL ELEL DNQ+ +IENLD L+NLE+LDLSFNRI++I+G
Sbjct: 59 IRRLCFTWNLIKKIENLDTLTTLVELELRDNQIVIIENLDVLVNLELLDLSFNRIKKIEG 118
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L++L NL+KL+L SNKI IEN+ HLK L LELGDNKIR I NL+GL NL L LGKNK
Sbjct: 119 LENLLNLQKLFLSSNKIQCIENLSHLKNLITLELGDNKIREIINLEGLENLTNLXLGKNK 178
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I NL L L +LSLQ NR+ IENLE L NL Q+YLSENG++ IE L + KL T
Sbjct: 179 ITKIKNLGCLQNLQLLSLQSNRITKIENLEELKNLDQIYLSENGISCIEGLSNCSKLTTF 238
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A NKI I+NI HL +L+EFWIN+N++ +W T+ L NK+LQT+YL+ NP+A+DPNY
Sbjct: 239 DLANNKIKKIENIEHLEDLEEFWINNNEIEEWTTIENLALNKKLQTVYLEHNPIAKDPNY 298
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKIKL+ PW+VQ+DATL
Sbjct: 299 RRKIKLLLPWLVQLDATLC 317
>gi|289742951|gb|ADD20223.1| phosphatase 1 regulatory subunit [Glossina morsitans morsitans]
Length = 338
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 150/259 (57%), Positives = 206/259 (79%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ERL LRWNLIKKIEN+HMLT+L E+ELYDNQ+T +ENLD+L+NL+ILD+SFNR+ +I+
Sbjct: 79 VERLYLRWNLIKKIENLHMLTSLVEVELYDNQITRLENLDSLVNLQILDVSFNRLTKIEN 138
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L LEKLYL +N+I++IEN++ L L +LELGDNKI+ IEN+D L NL +L+LG+NK
Sbjct: 139 LQNLLKLEKLYLVANRITEIENINMLTNLTMLELGDNKIKKIENIDSLVNLRQLFLGRNK 198
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL +L KL +LSLQ NR+ IENLE LT LT+LYLSENG+ +ENL +N +LETL
Sbjct: 199 ITKIENLDNLIKLELLSLQANRIVKIENLENLTKLTELYLSENGIEQVENLDNNVQLETL 258
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N++ I NI +L L+E W+N+N + +W V VL+ NK L+T+YL+ NPVA + Y
Sbjct: 259 DLAKNRLKSIDNINNLVRLEELWLNNNSIDNWKNVEVLKENKTLKTVYLEHNPVADEAMY 318
Query: 301 RRKIKLVCPWIVQIDATLA 319
R K++ + PW+ +IDATL
Sbjct: 319 RLKLRDIAPWLEKIDATLC 337
>gi|326925782|ref|XP_003209088.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like isoform
1 [Meleagris gallopavo]
Length = 354
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/259 (56%), Positives = 198/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NL+K+IEN+ L TL+EL+LYDNQ+ IENL+ L++LEILD+SFN +R I+G
Sbjct: 94 VKTLCLRQNLVKRIENLEQLQTLRELDLYDNQIRKIENLEALVDLEILDISFNVLRHIEG 153
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L L+KL+L +NKISKIEN+ +L+ L++LELG N+IR IEN+D L NL+ L+LGKNK
Sbjct: 154 LDQLTQLKKLFLVNNKISKIENLSNLQLLQMLELGSNRIRAIENIDALANLDSLFLGKNK 213
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 214 ITKLQNLDALTNLTVLSIQSNRLTKIEGLQSLVNLRELYLSNNGIEVIEGLENNNKLTML 273
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN V W+ ++ L+ L+T+YL+RNP+ +DP Y
Sbjct: 274 DIASNRIKKIENISHLTELQEFWMNDNLVESWSDLDELKGANNLETVYLERNPLQKDPQY 333
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 334 RRKIMLALPSVRQIDATFV 352
>gi|350535100|ref|NP_001232178.1| putative protein phosphatase 1 regulatory subunit 7 variant 1
[Taeniopygia guttata]
gi|197127864|gb|ACH44362.1| putative protein phosphatase 1 regulatory subunit 7 variant 1
[Taeniopygia guttata]
Length = 355
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/259 (56%), Positives = 199/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L TL+EL+LYDNQ+ IENL++L+ LE+LD+SFN +R I+G
Sbjct: 95 VKTLCLRQNLIKHIENLEQLQTLRELDLYDNQIRKIENLESLVELEVLDISFNVLRHIEG 154
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L L+KL+L +NKISKIEN+ +L+ L++LELG N+IR+IEN+D L NL+ L+LGKNK
Sbjct: 155 LDRLTQLKKLFLVNNKISKIENLSNLQMLQMLELGSNRIRVIENIDTLANLDSLFLGKNK 214
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 215 ITKLQNLDALTNLTVLSIQNNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTML 274
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN V W+ ++ L+ K L+T+YL+RNP+ +DP Y
Sbjct: 275 DIAANRIKKIENISHLTELQEFWMNDNLVESWSDLDELKGAKNLETVYLERNPLQKDPQY 334
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 335 RRKIMLALPPLRQIDATFV 353
>gi|326925784|ref|XP_003209089.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like isoform
2 [Meleagris gallopavo]
Length = 354
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/259 (56%), Positives = 198/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NL+K+IEN+ L TL+EL+LYDNQ+ IENL+ L++LEILD+SFN +R I+G
Sbjct: 94 VKTLCLRQNLVKRIENLEQLQTLRELDLYDNQIRKIENLEALVDLEILDISFNVLRHIEG 153
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L L+KL+L +NKISKIEN+ +L+ L++LELG N+IR IEN+D L NL+ L+LGKNK
Sbjct: 154 LDQLTQLKKLFLVNNKISKIENLSNLQLLQMLELGSNRIRAIENIDALANLDSLFLGKNK 213
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 214 ITKLQNLDALTNLTVLSIQSNRLTKIEGLQSLVNLRELYLSNNGIEVIEGLENNNKLTML 273
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN V W+ ++ L+ L+T+YL+RNP+ +DP Y
Sbjct: 274 DIASNRIKKIENISHLTELQEFWMNDNLVESWSDLDELKGANNLETVYLERNPLQKDPQY 333
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 334 RRKIMLALPSVRQIDATFV 352
>gi|195110653|ref|XP_001999894.1| GI24779 [Drosophila mojavensis]
gi|193916488|gb|EDW15355.1| GI24779 [Drosophila mojavensis]
Length = 328
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/259 (59%), Positives = 199/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IERL LRWNLIKKIEN+ ML TL ELELYDNQ+T IENLD L+NLEILDLSFNR+ +I+
Sbjct: 63 IERLYLRWNLIKKIENLDMLKTLVELELYDNQITKIENLDKLVNLEILDLSFNRLTKIEN 122
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L LEKLY +NK++ IEN+ L L +LELGDNK++ IEN++ L NL +L+LGKNK
Sbjct: 123 LDKLVKLEKLYFVANKLTVIENLGMLTNLTMLELGDNKLKKIENIETLVNLRQLFLGKNK 182
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL +L L ILSLQ NR+ IENLE LTNL +LY+SENG+ TIENL N+ L+TL
Sbjct: 183 IAKIENLDTLVNLEILSLQANRIVKIENLEKLTNLKELYISENGIETIENLSENKCLDTL 242
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N++ +I N+ L +L+E W+NDN + +W + VL+ NK LQTIYL+ NPVA D Y
Sbjct: 243 DLAKNRLKVIANLEALQQLEELWLNDNGIDNWKNLEVLKVNKALQTIYLEHNPVATDVRY 302
Query: 301 RRKIKLVCPWIVQIDATLA 319
R K++ + P + +IDATL
Sbjct: 303 RSKLRDILPQLQKIDATLC 321
>gi|260790941|ref|XP_002590499.1| hypothetical protein BRAFLDRAFT_124501 [Branchiostoma floridae]
gi|229275693|gb|EEN46510.1| hypothetical protein BRAFLDRAFT_124501 [Branchiostoma floridae]
Length = 317
Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 149/260 (57%), Positives = 199/260 (76%), Gaps = 1/260 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L LRWN IKKIE++ L +L+ELELYDNQ+ IENL TL+N+ ILD+SFN +R+I+
Sbjct: 56 VETLCLRWNNIKKIESLDQLVSLEELELYDNQIKQIENLSTLVNMRILDISFNMLRKIEN 115
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L NL+KL+L NKIS+IEN+ H K L +LELG N+IR+IENLDGL NLE+LYLGKNK
Sbjct: 116 LEALTNLQKLFLIQNKISQIENLGHFKSLTMLELGANRIRVIENLDGLENLEQLYLGKNK 175
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++++NL L+KL +LS+Q NR+ +E L LT+L QLY+S NG+ +E L +N +L+TL
Sbjct: 176 ITKLENLEKLSKLTVLSIQSNRITKLEGLSELTSLKQLYISHNGIQKLEGLDNNLQLDTL 235
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV-AQDPN 299
DVA N+I I+N++ L L+EFW N NQVSDW ++ L KQL T+YL+ NP+ A+D N
Sbjct: 236 DVANNRIQKIENVSQLVHLEEFWCNHNQVSDWKDLDELAGAKQLVTVYLEGNPIQAKDSN 295
Query: 300 YRRKIKLVCPWIVQIDATLA 319
YRRK+KL P + QIDATL
Sbjct: 296 YRRKVKLALPCLQQIDATLC 315
>gi|426218501|ref|XP_004003485.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 [Ovis aries]
Length = 430
Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 142/258 (55%), Positives = 197/258 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENLD L LE+LD+SFN +R I+G
Sbjct: 170 VKTLCLRQNLIKCIENLEGLQSLRELDLYDNQIRRIENLDALTELEVLDISFNLLRNIEG 229
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ L +L++LELG N+IR+IEN+D LT+LE L+LGKNK
Sbjct: 230 VDKLTRLKKLFLVNNKISKIENISSLHQLQMLELGSNRIRVIENVDALTSLESLFLGKNK 289
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 290 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEAIEGLDNNNKLTML 349
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N++ I+N++HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 350 DIASNRVKKIENVSHLTELQEFWMNDNLLDCWSDLDELKGARSLETVYLERNPLQRDPQY 409
Query: 301 RRKIKLVCPWIVQIDATL 318
RRK+ L P + QIDAT
Sbjct: 410 RRKVMLALPSVRQIDATF 427
>gi|327267141|ref|XP_003218361.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Anolis
carolinensis]
Length = 358
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 197/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +LKEL+LYDNQ+ IENLD L LE+LD+SFN +R I+G
Sbjct: 98 VKTLCLRQNLIKCIENLEQLQSLKELDLYDNQIRTIENLDALTGLEVLDISFNVLRHIEG 157
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L L+KL+L +NKI+KIEN+ +L++L++LELG N+IR I+N+D LTNL+ L+LGKNK
Sbjct: 158 LDQLTQLKKLFLVNNKINKIENLSNLQQLQILELGSNRIREIQNIDALTNLDSLFLGKNK 217
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL +
Sbjct: 218 ITKLQNLDALTNLTVLSIQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMV 277
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ K L+T+YL+RNP+ +DP Y
Sbjct: 278 DIAANRIKKIENISHLTELQEFWMNDNLIESWSDLDELKAAKNLETVYLERNPLQKDPQY 337
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 338 RRKIMLALPSVRQIDATFV 356
>gi|417399633|gb|JAA46809.1| Putative protein phosphatase 1 regulatory subunit 7 [Desmodus
rotundus]
Length = 359
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/259 (56%), Positives = 197/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENLDTL LEILD+SFN +R I+G
Sbjct: 99 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIRKIENLDTLTELEILDISFNLLRNIEG 158
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ L +L++LELG N+IR IEN+D LT+LE L+LGKNK
Sbjct: 159 VDKLTQLKKLFLVNNKISKIENLSSLHQLQMLELGSNRIRAIENIDTLTSLESLFLGKNK 218
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +L+ L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 219 ITKLQNLDALSNLRVLSMQSNRLTKIEGLQSLVNLQELYLSHNGIEVIEGLENNNKLTML 278
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ K L+T+YL+RNP+ +DP Y
Sbjct: 279 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGAKSLETVYLERNPLQKDPQY 338
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 339 RRKVMLALPSVRQIDATFV 357
>gi|387017604|gb|AFJ50920.1| Protein phosphatase 1 regulatory subunit 7-like [Crotalus
adamanteus]
Length = 364
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 148/259 (57%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L TLKEL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 104 VKTLCLRQNLIKCIENLEQLQTLKELDLYDNQVRKIENLEALTGLEILDISFNILRHIEG 163
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L L+KL+L +NKISKIEN+ +L++L++LELG N+IR I+N D LTNL+ L+LGKNK
Sbjct: 164 LDQLTQLKKLFLVNNKISKIENLSNLQQLQMLELGSNRIRAIQNTDTLTNLDSLFLGKNK 223
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 224 ITKLQNLDALTNLTVLSIQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTML 283
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI HLTELQEFW+NDN + W+ ++ L+ K+L+T+YL+RNP+ +DP Y
Sbjct: 284 DIAANRIKKIENITHLTELQEFWMNDNLIECWSDLDELKGAKKLETVYLERNPLQKDPQY 343
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 344 RRKIMLALPSVRQIDATFV 362
>gi|403291485|ref|XP_003936819.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 1
[Saimiri boliviensis boliviensis]
Length = 360
Score = 287 bits (734), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 197/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 160 VDKLTQLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 280 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 339
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 340 RRKVMLALPSVRQIDATFV 358
>gi|242019119|ref|XP_002430013.1| protein phosphatase 1 regulatory subunit, putative [Pediculus
humanus corporis]
gi|212515071|gb|EEB17275.1| protein phosphatase 1 regulatory subunit, putative [Pediculus
humanus corporis]
Length = 329
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 155/259 (59%), Positives = 195/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+++L LRWNLIKKIEN+ L+TL ELELYDNQ+T IENL+ L NLE+LDLS+NRI++I+G
Sbjct: 70 LKKLCLRWNLIKKIENLSTLSTLTELELYDNQITEIENLEALTNLEVLDLSYNRIKQIQG 129
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L NL +LYL SNKI +IEN+ L KL LELGDNKIR IENLD LTNL EL+LGKNK
Sbjct: 130 LDALKNLVRLYLVSNKIKQIENLSSLVKLTHLELGDNKIRKIENLDNLTNLVELHLGKNK 189
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++++NL SL+ L IL + NRL IE LE L NL +LY+SEN + TIE L L TL
Sbjct: 190 ITKVENLESLSNLKILGVMSNRLTKIEGLEMLHNLEELYMSENLIDTIEGLGGCTMLNTL 249
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A NKI +I NI HL+ L+E W+N N + DW+ + L+ + L+TIYL+ NPVA+D Y
Sbjct: 250 DLASNKIKLIDNILHLSGLRELWLNSNSIEDWSCIEKLKVLENLETIYLEYNPVAKDIAY 309
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+KL P + QIDATL
Sbjct: 310 RRKLKLFLPTLTQIDATLC 328
>gi|449266936|gb|EMC77914.1| Protein phosphatase 1 regulatory subunit 7 [Columba livia]
Length = 292
Score = 286 bits (733), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 147/259 (56%), Positives = 197/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK+IEN+ L TL+EL+LYDNQ+ IENL++L+ LEILD+SFN +R I+G
Sbjct: 32 VKTLCLRQNLIKRIENLEQLQTLRELDLYDNQIRKIENLESLVELEILDISFNVLRHIEG 91
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L L+KL+L +NKISKIEN+ L+ L++LELG N+IR IEN+D L +L+ L+LGKNK
Sbjct: 92 LDRLTQLKKLFLVNNKISKIENLSKLQMLQMLELGSNRIRAIENIDTLAHLDSLFLGKNK 151
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 152 ITKLQNLDALTNLTVLSIQNNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTML 211
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI HLTELQEFW+NDN V W+ ++ L+ K L+T+YL+RNP+ +DP Y
Sbjct: 212 DIASNRIKKIENINHLTELQEFWMNDNLVESWSDLDELKGAKNLETVYLERNPLQKDPQY 271
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 272 RRKIMLALPTVRQIDATFV 290
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 89/152 (58%), Gaps = 3/152 (1%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK ++ L L N I+ IENI L L L L N++T ++NLD L NL +L + NR+
Sbjct: 115 SKLQMLQMLELGSNRIRAIENIDTLAHLDSLFLGKNKITKLQNLDALTNLTVLSIQNNRL 174
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
+I+GL L NL +LYL N I IE +++ KL +L++ N+I+ IEN++ LT L+E +
Sbjct: 175 TKIEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENINHLTELQEFW 234
Query: 176 LGKNKI---SRIDNLASLTKLNILSLQCNRLR 204
+ N + S +D L L + L+ N L+
Sbjct: 235 MNDNLVESWSDLDELKGAKNLETVYLERNPLQ 266
>gi|351713257|gb|EHB16176.1| Protein phosphatase 1 regulatory subunit 7 [Heterocephalus glaber]
Length = 360
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 160 IDQLTQLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 280 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDALKGARSLETVYLERNPLHRDPQY 339
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 340 RRKVMLALPSVRQIDATFV 358
>gi|345199288|ref|NP_001230831.1| protein phosphatase 1, regulatory (inhibitor) subunit 7 [Sus
scrofa]
Length = 360
Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK I N+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIGNLEALQSLRELDLYDNQIRKIENLEALTELEILDISFNLLRSIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIEN+ L++L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 160 VDKLTRLKKLFLVNNKINKIENLSSLRQLQMLELGSNRIRAIENVDTLTNLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L SN KL L
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLDSNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+N++HLTELQEFW+NDN + W+ ++ L+ K L+T+YL+RNP+ +DP Y
Sbjct: 280 DIASNRIKKIENVSHLTELQEFWMNDNLLESWSDLDELKGAKSLETVYLERNPLQKDPQY 339
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 340 RRKILLALPTVRQIDATFV 358
>gi|403291487|ref|XP_003936820.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 2
[Saimiri boliviensis boliviensis]
Length = 317
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 161/314 (51%), Positives = 217/314 (69%), Gaps = 18/314 (5%)
Query: 24 AVENTHGNQMSLDNPDEESE----AETT--ESKAEDE----------ESKEVC--IERLL 65
A E+ G Q S + +EE E ET + AED E EV ++ L
Sbjct: 2 AAESGAGQQQSQEMMEEEHELPVDMETINLDRDAEDVDLNHYRIGKIEGFEVLKKVKTLC 61
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G+D L
Sbjct: 62 LRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLT 121
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNKI+++
Sbjct: 122 QLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQ 181
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL LD+A N
Sbjct: 182 NLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASN 241
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIK 305
+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP YRRK+
Sbjct: 242 RIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVM 301
Query: 306 LVCPWIVQIDATLA 319
L P + QIDAT
Sbjct: 302 LALPSVRQIDATFV 315
>gi|77735427|ref|NP_001029410.1| protein phosphatase 1 regulatory subunit 7 [Bos taurus]
gi|108860896|sp|Q3T0W4.1|PP1R7_BOVIN RecName: Full=Protein phosphatase 1 regulatory subunit 7; AltName:
Full=Protein phosphatase 1 regulatory subunit 22
gi|74267606|gb|AAI02229.1| Protein phosphatase 1, regulatory (inhibitor) subunit 7 [Bos
taurus]
gi|296488736|tpg|DAA30849.1| TPA: protein phosphatase 1 regulatory subunit 7 [Bos taurus]
Length = 360
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/259 (55%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENLD L LE+LD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIENLEGLQSLRELDLYDNQIRRIENLDALTELEVLDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIEN+ L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 160 IDKLTRLKKLFLVNNKINKIENISSLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLDNNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+N++HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 280 DIASNRIKKIENVSHLTELQEFWMNDNLLDCWSDLDELKGARSLETVYLERNPLQRDPQY 339
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 340 RRKIMLALPSVRQIDATFV 358
>gi|410969750|ref|XP_003991355.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 1
[Felis catus]
Length = 360
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/259 (55%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 100 VKSLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTQLEILDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ L +L++LELG N+IR IEN+D LT+LE L+LGKNK
Sbjct: 160 VDKLTRLKKLFLVNNKISKIENISSLHQLQMLELGSNRIRAIENIDTLTSLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL +E L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKMEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+N++HLTELQEFW+NDN + W+ ++ L+ K L+T+YL+RNP+ +DP Y
Sbjct: 280 DIASNRIKKIENVSHLTELQEFWMNDNLLESWSDLDELKAAKSLETVYLERNPLQKDPQY 339
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 340 RRKIMLALPTVRQIDATFV 358
>gi|359322867|ref|XP_003639940.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Canis
lupus familiaris]
Length = 360
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/259 (55%), Positives = 197/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L +LEILD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIENLGELQSLRELDLYDNQIKKIENLEALTHLEILDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LT+LE L+LGKNK
Sbjct: 160 VDKLTRLRKLFLVNNKISKIENISNLHQLQMLELGSNRIRAIENIDTLTSLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL +E L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKMEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+N++HLTELQEFW+NDN + W+ ++ L+ K L+T+YL+RNP+ +DP Y
Sbjct: 280 DIASNRIKKIENVSHLTELQEFWMNDNLLESWSDLDELKAAKSLETVYLERNPLQKDPQY 339
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 340 RRKIMLALPTVRQIDATFV 358
>gi|12963569|ref|NP_075689.1| protein phosphatase 1 regulatory subunit 7 [Mus musculus]
gi|108860898|sp|Q3UM45.2|PP1R7_MOUSE RecName: Full=Protein phosphatase 1 regulatory subunit 7; AltName:
Full=Protein phosphatase 1 regulatory subunit 22
gi|12655852|gb|AAK00624.1|AF222867_1 protein phosphatase-1 regulatory subunit 7 [Mus musculus]
gi|12831470|gb|AAK08624.1| protein phosphatase-1 regulatory subunit 7 [Mus musculus]
gi|15488779|gb|AAH13524.1| Protein phosphatase 1, regulatory (inhibitor) subunit 7 [Mus
musculus]
gi|74194108|dbj|BAE36954.1| unnamed protein product [Mus musculus]
gi|148708015|gb|EDL39962.1| protein phosphatase 1, regulatory (inhibitor) subunit 7, isoform
CRA_b [Mus musculus]
Length = 361
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/257 (55%), Positives = 197/257 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LE+LD+SFN +R I+G
Sbjct: 101 VKSLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEVLDISFNMLRNIEG 160
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 161 IDKLTQLKKLFLVNNKINKIENISNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 220
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 221 ITKLQNLDALTNLTVLSVQSNRLAKIEGLQSLVNLRELYLSNNGIEVIEGLENNNKLTML 280
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 281 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 340
Query: 301 RRKIKLVCPWIVQIDAT 317
RRK+ L P + QIDAT
Sbjct: 341 RRKVMLALPSVRQIDAT 357
>gi|440901278|gb|ELR52253.1| Protein phosphatase 1 regulatory subunit 7, partial [Bos grunniens
mutus]
Length = 343
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/259 (55%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENLD L LE+LD+SFN +R I+G
Sbjct: 83 VKTLCLRQNLIKCIENLEGLQSLRELDLYDNQIRRIENLDALTELEVLDISFNLLRNIEG 142
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIEN+ L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 143 IDKLTRLKKLFLVNNKINKIENISSLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 202
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 203 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLDNNNKLTML 262
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+N++HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 263 DIASNRIKKIENVSHLTELQEFWMNDNLLDCWSDLDELKGARSLETVYLERNPLQRDPQY 322
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 323 RRKIMLALPSVRQIDATFV 341
>gi|74203138|dbj|BAE26253.1| unnamed protein product [Mus musculus]
Length = 361
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/257 (55%), Positives = 197/257 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LE+LD+SFN +R I+G
Sbjct: 101 VKSLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEVLDISFNMLRNIEG 160
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 161 IDKLTQLKKLFLVNNKINKIENISNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 220
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 221 ITKLQNLDALTNLTVLSVQSNRLAKIEGLQSLVNLRELYLSNNGIEVIEGLENNNKLTML 280
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 281 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 340
Query: 301 RRKIKLVCPWIVQIDAT 317
RRK+ L P + QIDAT
Sbjct: 341 RRKVMLALPSVRQIDAT 357
>gi|354474214|ref|XP_003499326.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like
[Cricetulus griseus]
Length = 347
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/259 (55%), Positives = 197/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 87 VKSLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 146
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIEN+ L++L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 147 IDKLTRLKKLFLVNNKINKIENIGTLRQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 206
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 207 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTML 266
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 267 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARNLETVYLERNPLQKDPQY 326
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 327 RRKVMLALPSVRQIDATFV 345
>gi|410969752|ref|XP_003991356.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 2
[Felis catus]
Length = 317
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/259 (55%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 57 VKSLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTQLEILDISFNLLRNIEG 116
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ L +L++LELG N+IR IEN+D LT+LE L+LGKNK
Sbjct: 117 VDKLTRLKKLFLVNNKISKIENISSLHQLQMLELGSNRIRAIENIDTLTSLESLFLGKNK 176
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL +E L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 177 ITKLQNLDALTNLTVLSMQSNRLTKMEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTML 236
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+N++HLTELQEFW+NDN + W+ ++ L+ K L+T+YL+RNP+ +DP Y
Sbjct: 237 DIASNRIKKIENVSHLTELQEFWMNDNLLESWSDLDELKAAKSLETVYLERNPLQKDPQY 296
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 297 RRKIMLALPTVRQIDATFV 315
>gi|334347498|ref|XP_001364455.2| PREDICTED: protein phosphatase 1 regulatory subunit 7-like isoform
1 [Monodelphis domestica]
Length = 357
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 144/259 (55%), Positives = 197/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LE LD+SFN +R I+G
Sbjct: 97 VKSLCLRQNLIKCIENLEELQSLRELDLYDNQIKRIENLEALTELETLDISFNLLRNIEG 156
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L +L+KL+L +NKISKIEN+ +L++LK+LELG N+IR IEN+D LTNL+ L+LGKNK
Sbjct: 157 IDQLTHLKKLFLVNNKISKIENISNLQQLKMLELGSNRIRAIENIDNLTNLDSLFLGKNK 216
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +L+ L +LS+Q NR+ IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 217 ITKLQNLDALSNLTVLSMQSNRITKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTML 276
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+N++HLTELQEFW+NDN + W+ ++ L+ K L+T+YL+RNP+ +DP Y
Sbjct: 277 DIASNRIKKIENVSHLTELQEFWMNDNLIESWSDLDELKGAKLLETVYLERNPLQKDPQY 336
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P I QIDAT
Sbjct: 337 RRKIMLALPTIRQIDATFV 355
>gi|90079307|dbj|BAE89333.1| unnamed protein product [Macaca fascicularis]
Length = 375
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 115 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 174
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 175 VDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 234
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 235 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTML 294
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 295 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 354
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 355 RRKVMLALPSVRQIDATFV 373
>gi|432916121|ref|XP_004079302.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Oryzias
latipes]
Length = 346
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/255 (55%), Positives = 196/255 (76%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L LR NLIKKIEN+ L++L+EL+LYDNQ+ +ENLD L LE LD+SFN +R+I+ L+
Sbjct: 89 LSLRQNLIKKIENLESLSSLRELDLYDNQIRKLENLDNLTELEQLDVSFNILRKIENLER 148
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L L+KL+L NKI+ I N++H L++LELG N+IR+IENLDGLT+L L+LG NKI++
Sbjct: 149 LTQLKKLFLVHNKITGIANLEHFSFLEMLELGSNRIRVIENLDGLTSLTSLFLGTNKINK 208
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ NL +L L++LS+Q NR+ IE L+ L NL +LYLS NG+ IE L +N+KL TLD+A
Sbjct: 209 LQNLDALHNLSVLSIQSNRITKIEGLQNLVNLKELYLSHNGIEVIEGLENNKKLTTLDIA 268
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRK 303
N++ I+NI+HLTELQEFW+NDNQ+ +W+ ++ L+N K L+T+YL+RNP+ +DP YRRK
Sbjct: 269 ANRVKKIENISHLTELQEFWMNDNQIENWSDLDELKNAKSLETVYLERNPLQKDPQYRRK 328
Query: 304 IKLVCPWIVQIDATL 318
I L P + QIDAT
Sbjct: 329 IMLALPSVRQIDATF 343
>gi|4506013|ref|NP_002703.1| protein phosphatase 1 regulatory subunit 7 [Homo sapiens]
gi|397483869|ref|XP_003813113.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 1
[Pan paniscus]
gi|426339152|ref|XP_004033524.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 1
[Gorilla gorilla gorilla]
gi|74762145|sp|Q15435.1|PP1R7_HUMAN RecName: Full=Protein phosphatase 1 regulatory subunit 7; AltName:
Full=Protein phosphatase 1 regulatory subunit 22
gi|1085028|emb|CAA90626.1| yeast sds22 homolog [Homo sapiens]
gi|4633067|gb|AAD26611.1| protein phosphatase-1 regulatory subunit 7 alpha1 [Homo sapiens]
gi|12654185|gb|AAH00910.1| Protein phosphatase 1, regulatory (inhibitor) subunit 7 [Homo
sapiens]
gi|54697128|gb|AAV38936.1| protein phosphatase 1, regulatory subunit 7 [Homo sapiens]
gi|61355994|gb|AAX41197.1| protein phosphatase 1 regulatory subunit 7 [synthetic construct]
gi|119591650|gb|EAW71244.1| protein phosphatase 1, regulatory subunit 7, isoform CRA_b [Homo
sapiens]
gi|168279119|dbj|BAG11439.1| protein phosphatase 1 regulatory subunit 7 [synthetic construct]
gi|1585165|prf||2124310A sds22 gene
Length = 360
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 160 VDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 280 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 339
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 340 RRKVMLALPSVRQIDATFV 358
>gi|332259738|ref|XP_003278941.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 2
[Nomascus leucogenys]
Length = 360
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 160 VDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 280 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 339
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 340 RRKVMLALPSVRQIDATFV 358
>gi|402889913|ref|XP_003908242.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 1
[Papio anubis]
gi|387542688|gb|AFJ71971.1| protein phosphatase 1 regulatory subunit 7 [Macaca mulatta]
Length = 360
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 160 VDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 280 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 339
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 340 RRKVMLALPSVRQIDATFV 358
>gi|402889915|ref|XP_003908243.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 2
[Papio anubis]
Length = 332
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/314 (51%), Positives = 215/314 (68%), Gaps = 18/314 (5%)
Query: 24 AVENTHGNQMSLDNPDEESE----AETT--ESKAEDE----------ESKEVC--IERLL 65
A E G Q S + +EE E ET + AED E EV ++ L
Sbjct: 17 AAERGAGQQQSQEMMEEEHELPVDMETINLDRDAEDVDLNHCRIGKIEGFEVLKKVKTLC 76
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G+D L
Sbjct: 77 LRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLT 136
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNKI+++
Sbjct: 137 RLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQ 196
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL LD+A N
Sbjct: 197 NLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASN 256
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIK 305
+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP YRRK+
Sbjct: 257 RIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVM 316
Query: 306 LVCPWIVQIDATLA 319
L P + QIDAT
Sbjct: 317 LALPSVRQIDATFV 330
>gi|301775549|ref|XP_002923185.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like
[Ailuropoda melanoleuca]
Length = 360
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 143/259 (55%), Positives = 197/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTQLEILDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L++L+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LT+LE L+LGKNK
Sbjct: 160 VDKLTRLKRLFLVNNKISKIENISNLHQLQMLELGSNRIRAIENIDTLTSLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL +E L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKMEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+N++HLTELQEFW+NDN + W+ ++ L+ K L+T+YL+RNP+ +DP Y
Sbjct: 280 DIASNRIKKIENVSHLTELQEFWMNDNLLESWSDLDELKAAKSLETVYLERNPLQKDPQY 339
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 340 RRKIMLALPTVRQIDATFV 358
>gi|114584231|ref|XP_001158701.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 15
[Pan troglodytes]
gi|410248198|gb|JAA12066.1| protein phosphatase 1, regulatory (inhibitor) subunit 7 [Pan
troglodytes]
gi|410355497|gb|JAA44352.1| protein phosphatase 1, regulatory (inhibitor) subunit 7 [Pan
troglodytes]
Length = 360
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 100 VKNLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 160 VDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 280 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 339
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 340 RRKVMLALPSVRQIDATFV 358
>gi|291414788|ref|XP_002723641.1| PREDICTED: protein phosphatase 1, regulatory subunit 7 [Oryctolagus
cuniculus]
Length = 374
Score = 284 bits (727), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 143/259 (55%), Positives = 197/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL++L LEILD+SFN +R I+G
Sbjct: 114 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIRKIENLESLAELEILDISFNLLRNIEG 173
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIEN+ L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 174 IDKLTRLKKLFLVNNKINKIENIGTLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 233
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 234 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLDNNNKLTML 293
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+N++HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 294 DIASNRIKKIENVSHLTELQEFWMNDNLLDSWSDLDELKGARSLETVYLERNPLQKDPQY 353
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 354 RRKVMLALPSVRQIDATFV 372
>gi|397483871|ref|XP_003813114.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 2
[Pan paniscus]
gi|426339154|ref|XP_004033525.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 2
[Gorilla gorilla gorilla]
gi|441669278|ref|XP_004092113.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 [Nomascus
leucogenys]
gi|4633066|gb|AAD26610.1| protein phosphatase-1 regulatory subunit 7 alpha2 [Homo sapiens]
gi|119591649|gb|EAW71243.1| protein phosphatase 1, regulatory subunit 7, isoform CRA_a [Homo
sapiens]
gi|194376498|dbj|BAG57395.1| unnamed protein product [Homo sapiens]
Length = 317
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/314 (51%), Positives = 215/314 (68%), Gaps = 18/314 (5%)
Query: 24 AVENTHGNQMSLDNPDEESE----AETT--ESKAEDE----------ESKEVC--IERLL 65
A E G Q S + +EE E ET + AED E EV ++ L
Sbjct: 2 AAERGAGQQQSQEMMEEEHELPVDMETINLDRDAEDVDLNHYRIGKIEGFEVLKKVKTLC 61
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G+D L
Sbjct: 62 LRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLT 121
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNKI+++
Sbjct: 122 RLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQ 181
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL LD+A N
Sbjct: 182 NLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASN 241
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIK 305
+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP YRRK+
Sbjct: 242 RIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVM 301
Query: 306 LVCPWIVQIDATLA 319
L P + QIDAT
Sbjct: 302 LALPSVRQIDATFV 315
>gi|148708014|gb|EDL39961.1| protein phosphatase 1, regulatory (inhibitor) subunit 7, isoform
CRA_a [Mus musculus]
Length = 317
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/257 (55%), Positives = 197/257 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LE+LD+SFN +R I+G
Sbjct: 57 VKSLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEVLDISFNMLRNIEG 116
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 117 IDKLTQLKKLFLVNNKINKIENISNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 176
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 177 ITKLQNLDALTNLTVLSVQSNRLAKIEGLQSLVNLRELYLSNNGIEVIEGLENNNKLTML 236
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 237 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 296
Query: 301 RRKIKLVCPWIVQIDAT 317
RRK+ L P + QIDAT
Sbjct: 297 RRKVMLALPSVRQIDAT 313
>gi|114584240|ref|XP_001158513.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 12
[Pan troglodytes]
Length = 317
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/314 (51%), Positives = 215/314 (68%), Gaps = 18/314 (5%)
Query: 24 AVENTHGNQMSLDNPDEESE----AETT--ESKAEDE----------ESKEVC--IERLL 65
A E G Q S + +EE E ET + AED E EV ++ L
Sbjct: 2 AAERGAGQQQSQEMMEEEHELPVDMETINLDRDAEDVDLNHYRIGKIEGFEVLKKVKNLC 61
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G+D L
Sbjct: 62 LRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLT 121
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNKI+++
Sbjct: 122 RLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQ 181
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL LD+A N
Sbjct: 182 NLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASN 241
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIK 305
+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP YRRK+
Sbjct: 242 RIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVM 301
Query: 306 LVCPWIVQIDATLA 319
L P + QIDAT
Sbjct: 302 LALPSVRQIDATFV 315
>gi|380798617|gb|AFE71184.1| protein phosphatase 1 regulatory subunit 7, partial [Macaca
mulatta]
Length = 348
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 88 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 147
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 148 VDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 207
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 208 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTML 267
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 268 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 327
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 328 RRKVMLALPSVRQIDATFV 346
>gi|149037520|gb|EDL91951.1| protein phosphatase 1, regulatory (inhibitor) subunit 7, isoform
CRA_b [Rattus norvegicus]
Length = 317
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 154/314 (49%), Positives = 216/314 (68%), Gaps = 18/314 (5%)
Query: 24 AVENTHGNQMSLDNPDEESE-AETTESKAEDEESKEV-----------------CIERLL 65
A E G Q S + +EE E A E+ + D ++++V ++ L
Sbjct: 2 AAERGAGQQQSQEMMEEEHELAVDMETISLDRDAEDVDLNHYRIGKIEGFEVLKKVKSLC 61
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LE+LD+SFN +R I+G+D L
Sbjct: 62 LRQNLIKCIENLDELQSLRELDLYDNQIKKIENLEALTELEVLDISFNLLRNIEGIDKLT 121
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
L+KL+L +NKI+KIEN+ L++L++LELG N+IR IEN+D LTNLE L+LGKNKI+++
Sbjct: 122 QLKKLFLVNNKINKIENISTLQQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQ 181
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
NL +L+ L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL LD+A N
Sbjct: 182 NLDALSNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASN 241
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIK 305
+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP YRRK+
Sbjct: 242 RIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVM 301
Query: 306 LVCPWIVQIDATLA 319
L P + QIDAT
Sbjct: 302 LALPSVRQIDATFV 315
>gi|348501258|ref|XP_003438187.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like
[Oreochromis niloticus]
Length = 345
Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 141/255 (55%), Positives = 193/255 (75%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L LR NLIKKIEN+ L+ L+EL+ YDNQ+ +ENL L LE LD+SFN +R+++GL+
Sbjct: 88 LSLRQNLIKKIENLDSLSALRELDFYDNQIRKLENLHNLTELEQLDVSFNVLRKVEGLEQ 147
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L L+KL+L NKIS I N++HL L++LELG N+IR+IENLD LT+L+ L+LG NKI+R
Sbjct: 148 LTRLKKLFLLHNKISSIGNLEHLTGLEMLELGSNRIRVIENLDSLTSLQSLFLGTNKITR 207
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ NL +L L +LS+Q NR+ IE L+ L NL +LYLS NG+ IE L +N+KL TLD+A
Sbjct: 208 LQNLDALHNLTVLSIQSNRITKIEGLQNLVNLKELYLSHNGVEVIEGLENNKKLTTLDIA 267
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRK 303
N++ I+NI+HLTELQEFW+NDNQ+ +W+ ++ L+N L+T+YL+RNP+ +DP YRRK
Sbjct: 268 ANRVKKIENISHLTELQEFWMNDNQIDNWSDLDELKNATSLETVYLERNPLQKDPQYRRK 327
Query: 304 IKLVCPWIVQIDATL 318
I L P + QIDAT
Sbjct: 328 IMLALPSVRQIDATF 342
>gi|149411469|ref|XP_001513331.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like
[Ornithorhynchus anatinus]
Length = 402
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 143/259 (55%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 142 VKTLCLRQNLIKCIENLEQLQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRHIEG 201
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L+ L+KL+L +NKI+KIEN+ +L++L++LELG N+IR IEN+D L NL+ L+LGKNK
Sbjct: 202 LDQLSQLKKLFLVNNKINKIENISNLQQLQMLELGSNRIRAIENIDTLANLDSLFLGKNK 261
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 262 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTML 321
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+N+ HL ELQEFW+NDN + W+ ++ L+ K L+T+YL+RNP+ +DP Y
Sbjct: 322 DIASNRIKKIENVNHLIELQEFWMNDNLIESWSDLDELKGAKNLETVYLERNPLQKDPQY 381
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 382 RRKIMLALPTVRQIDATFV 400
>gi|355565348|gb|EHH21837.1| hypothetical protein EGK_04990 [Macaca mulatta]
Length = 346
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 86 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 145
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 146 VDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 205
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 206 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTML 265
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 266 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 325
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 326 RRKVMLALPSVRQIDATFV 344
>gi|47228242|emb|CAG07637.1| unnamed protein product [Tetraodon nigroviridis]
Length = 281
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 144/255 (56%), Positives = 196/255 (76%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L LR NL+KKIEN+ LT+L+EL+LYDNQ+ +ENL L LE LD+SFN +R+++GL+
Sbjct: 24 LSLRQNLLKKIENLDSLTSLRELDLYDNQIRKLENLHHLPELEQLDVSFNILRKVEGLEQ 83
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L L+KL+L NKIS I N+DH K L++LELG N+IR+IENLDGLT+L+ L+LG NKI++
Sbjct: 84 LTRLKKLFLLHNKISSIANLDHFKCLEMLELGSNRIRVIENLDGLTSLQSLFLGTNKITK 143
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ NL L L ILS+Q NR+ +E L+ L +L +LYLS NG+ IE L +N+KL TLD+A
Sbjct: 144 LQNLDGLHNLTILSIQSNRITKLEGLQNLISLKELYLSHNGIEVIEGLENNKKLTTLDIA 203
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRK 303
N+I I+NI+HLTELQEFW+NDNQ+ +W+ ++ L+N K L+T+YL+RNP+ +DP YRRK
Sbjct: 204 ANRIKKIENISHLTELQEFWMNDNQIDNWSDLDELKNAKSLETVYLERNPLQKDPQYRRK 263
Query: 304 IKLVCPWIVQIDATL 318
I L P + QIDAT
Sbjct: 264 IMLALPTVRQIDATF 278
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 94/148 (63%), Gaps = 3/148 (2%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
C+E L L N I+ IEN+ LT+L+ L L N++T ++NLD L NL IL + NRI +++
Sbjct: 108 CLEMLELGSNRIRVIENLDGLTSLQSLFLGTNKITKLQNLDGLHNLTILSIQSNRITKLE 167
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
GL +L +L++LYL N I IE +++ KKL L++ N+I+ IEN+ LT L+E ++ N
Sbjct: 168 GLQNLISLKELYLSHNGIEVIEGLENNKKLTTLDIAANRIKKIENISHLTELQEFWMNDN 227
Query: 180 KI---SRIDNLASLTKLNILSLQCNRLR 204
+I S +D L + L + L+ N L+
Sbjct: 228 QIDNWSDLDELKNAKSLETVYLERNPLQ 255
>gi|431912271|gb|ELK14408.1| Protein phosphatase 1 regulatory subunit 7 [Pteropus alecto]
Length = 360
Score = 283 bits (724), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 140/258 (54%), Positives = 196/258 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENLD L LE+LD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIENLEELHSLRELDLYDNQIKKIENLDALTELEVLDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIEN+ +L +L++LELG N+IR IEN+D LT+LE L+LGKNK
Sbjct: 160 VDKLTRLKKLFLVNNKINKIENISNLHQLQMLELGSNRIRAIENIDTLTSLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +L+ L +LS+Q NRL IE L+ L NL +LYLS NG+ +E L +N KL L
Sbjct: 220 ITKLQNLDALSNLTVLSMQSNRLTKIEGLQGLVNLRELYLSHNGIEVLEGLENNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+N++HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 280 DIASNRIKKIENVSHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQRDPQY 339
Query: 301 RRKIKLVCPWIVQIDATL 318
RRK+ L P + QIDAT
Sbjct: 340 RRKVTLALPSVRQIDATF 357
>gi|348577673|ref|XP_003474608.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Cavia
porcellus]
Length = 360
Score = 283 bits (724), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 143/259 (55%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNL+ L+LGKNK
Sbjct: 160 IDKLTQLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLQSLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+ NP+ +DP Y
Sbjct: 280 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLEHNPLQRDPQY 339
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 340 RRKVMLALPSVRQIDATFV 358
>gi|57634526|ref|NP_001009825.1| protein phosphatase 1 regulatory subunit 7 [Rattus norvegicus]
gi|81909701|sp|Q5HZV9.1|PP1R7_RAT RecName: Full=Protein phosphatase 1 regulatory subunit 7; AltName:
Full=Protein phosphatase 1 regulatory subunit 22
gi|57032943|gb|AAH88868.1| Protein phosphatase 1, regulatory (inhibitor) subunit 7 [Rattus
norvegicus]
gi|149037519|gb|EDL91950.1| protein phosphatase 1, regulatory (inhibitor) subunit 7, isoform
CRA_a [Rattus norvegicus]
Length = 360
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/259 (54%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LE+LD+SFN +R I+G
Sbjct: 100 VKSLCLRQNLIKCIENLDELQSLRELDLYDNQIKKIENLEALTELEVLDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIEN+ L++L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 160 IDKLTQLKKLFLVNNKINKIENISTLQQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +L+ L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 220 ITKLQNLDALSNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 280 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 339
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 340 RRKVMLALPSVRQIDATFV 358
>gi|395528316|ref|XP_003766276.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 [Sarcophilus
harrisii]
Length = 326
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L +LE LD+SFN +R I+G
Sbjct: 66 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIRKIENLEALKDLETLDISFNLLRSIEG 125
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L++LK+LELG N+IR IEN+D LTNL+ L+LGKNK
Sbjct: 126 IDQLTQLKKLFLVNNKISKIENLSNLQQLKMLELGSNRIRAIENIDSLTNLDSLFLGKNK 185
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 186 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTML 245
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+N++HL ELQEFW+NDN + W+ ++ L+ K L+T+YL+RNP+ +DP Y
Sbjct: 246 DIASNRIKKIENVSHLIELQEFWMNDNLIESWSDLDELKGAKNLETVYLERNPLQKDPQY 305
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P I QIDAT
Sbjct: 306 RRKIMLALPTIRQIDATFV 324
>gi|281340997|gb|EFB16581.1| hypothetical protein PANDA_012295 [Ailuropoda melanoleuca]
Length = 282
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/259 (55%), Positives = 197/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 22 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTQLEILDISFNLLRNIEG 81
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L++L+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LT+LE L+LGKNK
Sbjct: 82 VDKLTRLKRLFLVNNKISKIENISNLHQLQMLELGSNRIRAIENIDTLTSLESLFLGKNK 141
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL +E L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 142 ITKLQNLDALTNLTVLSMQSNRLTKMEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTML 201
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+N++HLTELQEFW+NDN + W+ ++ L+ K L+T+YL+RNP+ +DP Y
Sbjct: 202 DIASNRIKKIENVSHLTELQEFWMNDNLLESWSDLDELKAAKSLETVYLERNPLQKDPQY 261
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 262 RRKIMLALPTVRQIDATFV 280
>gi|395851519|ref|XP_003798301.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 1
[Otolemur garnettii]
Length = 360
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/259 (54%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LE+LD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEVLDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIENV +L +L++LELG N+IR IEN+D LT+LE L+LGKNK
Sbjct: 160 IDKLTRLKKLFLVNNKINKIENVSNLHQLQMLELGSNRIRAIENIDTLTSLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+N++HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 280 DIASNRIKKIENVSHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 339
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 340 RRKVMLALPSVRQIDATFV 358
>gi|197098176|ref|NP_001124579.1| protein phosphatase 1 regulatory subunit 7 [Pongo abelii]
gi|75071006|sp|Q5RFS7.1|PP1R7_PONAB RecName: Full=Protein phosphatase 1 regulatory subunit 7; AltName:
Full=Protein phosphatase 1 regulatory subunit 22
gi|55725025|emb|CAH89380.1| hypothetical protein [Pongo abelii]
Length = 360
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/259 (55%), Positives = 195/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D + L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 160 VDKVTQLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLQELYLSHNGIEVIEGLENNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTE QEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 280 DIASNRIKKIENISHLTEPQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 339
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 340 RRKVMLALPSVRQIDATFV 358
>gi|427787999|gb|JAA59451.1| Putative protein phosphatase 1 regulatory subunit [Rhipicephalus
pulchellus]
Length = 404
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 142/259 (54%), Positives = 192/259 (74%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L+ R NL+KKIEN+ LTTLKE+E YDNQ+T IENLD L+NLEILD+SFNR+ +I+
Sbjct: 144 VEVLIFRNNLLKKIENVQTLTTLKEIEFYDNQITKIENLDALVNLEILDISFNRLTKIEN 203
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L L+KL+L +N+I+KIEN+D L L++LELG N+I++IENLD L N++ L+LGKNK
Sbjct: 204 LDSLVKLKKLFLVNNRITKIENLDKLVNLELLELGSNRIKVIENLDRLVNIKSLFLGKNK 263
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL L +L +LS+Q NR+ +E L NL LYLS NG+ +ENL +N KLETL
Sbjct: 264 IAKLQNLEHLKQLELLSIQSNRIVKLEGLSENRNLVHLYLSHNGIEKLENLENNVKLETL 323
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A NKI + NI L L+EFW NDN + ++ V VL N +L T+YL NP+ +DP Y
Sbjct: 324 DLAANKIKHLTNIKQLVNLEEFWFNDNLIDNFEEVEVLRNFPKLATVYLHSNPIEKDPMY 383
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI ++CP + QIDAT+
Sbjct: 384 RRKIMMICPTVTQIDATMC 402
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 89/170 (52%), Gaps = 25/170 (14%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLIN-------------- 104
V +++L L N I KIEN+ L L+ LEL N++ VIENLD L+N
Sbjct: 208 VKLKKLFLVNNRITKIENLDKLVNLELLELGSNRIKVIENLDRLVNIKSLFLGKNKIAKL 267
Query: 105 --------LEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
LE+L + NRI +++GL NL LYL N I K+EN+++ KL+ L+L
Sbjct: 268 QNLEHLKQLELLSIQSNRIVKLEGLSENRNLVHLYLSHNGIEKLENLENNVKLETLDLAA 327
Query: 157 NKIRIIENLDGLTNLEELYLGKNKI---SRIDNLASLTKLNILSLQCNRL 203
NKI+ + N+ L NLEE + N I ++ L + KL + L N +
Sbjct: 328 NKIKHLTNIKQLVNLEEFWFNDNLIDNFEEVEVLRNFPKLATVYLHSNPI 377
>gi|427794413|gb|JAA62658.1| Putative protein phosphatase 1 regulatory subunit, partial
[Rhipicephalus pulchellus]
Length = 402
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 142/258 (55%), Positives = 192/258 (74%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L+ R NL+KKIEN+ LTTLKE+E YDNQ+T IENLD L+NLEILD+SFNR+ +I+
Sbjct: 142 VEVLIFRNNLLKKIENVQTLTTLKEIEFYDNQITKIENLDALVNLEILDISFNRLTKIEN 201
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L L+KL+L +N+I+KIEN+D L L++LELG N+I++IENLD L N++ L+LGKNK
Sbjct: 202 LDSLVKLKKLFLVNNRITKIENLDKLVNLELLELGSNRIKVIENLDRLVNIKSLFLGKNK 261
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL L +L +LS+Q NR+ +E L NL LYLS NG+ +ENL +N KLETL
Sbjct: 262 IAKLQNLEHLKQLELLSIQSNRIVKLEGLSENRNLVHLYLSHNGIEKLENLENNVKLETL 321
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A NKI + NI L L+EFW NDN + ++ V VL N +L T+YL NP+ +DP Y
Sbjct: 322 DLAANKIKHLTNIKQLVNLEEFWFNDNLIDNFEEVEVLRNFPKLATVYLHSNPIEKDPMY 381
Query: 301 RRKIKLVCPWIVQIDATL 318
RRKI ++CP + QIDAT+
Sbjct: 382 RRKIMMICPTVTQIDATM 399
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 88/168 (52%), Gaps = 25/168 (14%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLIN-------------- 104
V +++L L N I KIEN+ L L+ LEL N++ VIENLD L+N
Sbjct: 206 VKLKKLFLVNNRITKIENLDKLVNLELLELGSNRIKVIENLDRLVNIKSLFLGKNKIAKL 265
Query: 105 --------LEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
LE+L + NRI +++GL NL LYL N I K+EN+++ KL+ L+L
Sbjct: 266 QNLEHLKQLELLSIQSNRIVKLEGLSENRNLVHLYLSHNGIEKLENLENNVKLETLDLAA 325
Query: 157 NKIRIIENLDGLTNLEELYLGKNKI---SRIDNLASLTKLNILSLQCN 201
NKI+ + N+ L NLEE + N I ++ L + KL + L N
Sbjct: 326 NKIKHLTNIKQLVNLEEFWFNDNLIDNFEEVEVLRNFPKLATVYLHSN 373
>gi|109101715|ref|XP_001090766.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like isoform
1 [Macaca mulatta]
Length = 376
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 144/259 (55%), Positives = 193/259 (74%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 116 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 175
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 176 VDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 235
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG IE N KL L
Sbjct: 236 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGNDVIEGAEHNNKLTML 295
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 296 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 355
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 356 RRKVMLALPSVRQIDATFV 374
>gi|395851521|ref|XP_003798302.1| PREDICTED: protein phosphatase 1 regulatory subunit 7 isoform 2
[Otolemur garnettii]
Length = 317
Score = 280 bits (716), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 142/259 (54%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LE+LD+SFN +R I+G
Sbjct: 57 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEVLDISFNLLRNIEG 116
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIENV +L +L++LELG N+IR IEN+D LT+LE L+LGKNK
Sbjct: 117 IDKLTRLKKLFLVNNKINKIENVSNLHQLQMLELGSNRIRAIENIDTLTSLESLFLGKNK 176
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 177 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTML 236
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+N++HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 237 DIASNRIKKIENVSHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 296
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 297 RRKVMLALPSVRQIDATFV 315
>gi|410929703|ref|XP_003978239.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like
[Takifugu rubripes]
Length = 312
Score = 280 bits (715), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 139/255 (54%), Positives = 193/255 (75%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L LR NLIKKIEN+ LT+L+EL+LYDNQ+ +ENL L LE LD+SFN +R+++GL+
Sbjct: 55 LSLRQNLIKKIENLDSLTSLRELDLYDNQIRKLENLHQLTELEQLDVSFNILRKVEGLEQ 114
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L +L+KL+L NKIS I N+DH L++LELG N+IR+IENLD L++L+ L+LG NKI++
Sbjct: 115 LTSLKKLFLLHNKISGIANLDHFTCLEMLELGSNRIRVIENLDALSSLQSLFLGTNKITK 174
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ NL L L +LS+Q NR+ +E L+ L +L +LYLS NG+ IE L +N+KL TLD+A
Sbjct: 175 LQNLDGLHNLTVLSIQSNRITKLEGLQNLVSLKELYLSHNGIEVIEGLENNKKLTTLDIA 234
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRK 303
N+I I+NI HLTELQEFW+NDNQ+ +W+ ++ L+N + L+T+YL+RNP+ +DP YRRK
Sbjct: 235 ANRIKRIENIGHLTELQEFWMNDNQIDNWSDLDELKNARSLETVYLERNPLQKDPQYRRK 294
Query: 304 IKLVCPWIVQIDATL 318
I L P + QIDA
Sbjct: 295 IMLALPSVRQIDAAF 309
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 94/149 (63%), Gaps = 3/149 (2%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
C+E L L N I+ IEN+ L++L+ L L N++T ++NLD L NL +L + NRI ++
Sbjct: 138 TCLEMLELGSNRIRVIENLDALSSLQSLFLGTNKITKLQNLDGLHNLTVLSIQSNRITKL 197
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
+GL +L +L++LYL N I IE +++ KKL L++ N+I+ IEN+ LT L+E ++
Sbjct: 198 EGLQNLVSLKELYLSHNGIEVIEGLENNKKLTTLDIAANRIKRIENIGHLTELQEFWMND 257
Query: 179 NKI---SRIDNLASLTKLNILSLQCNRLR 204
N+I S +D L + L + L+ N L+
Sbjct: 258 NQIDNWSDLDELKNARSLETVYLERNPLQ 286
>gi|297265272|ref|XP_002799157.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like isoform
2 [Macaca mulatta]
Length = 317
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/259 (55%), Positives = 193/259 (74%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 57 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 116
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 117 VDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 176
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG IE N KL L
Sbjct: 177 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGNDVIEGAEHNNKLTML 236
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP Y
Sbjct: 237 DIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQY 296
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 297 RRKVMLALPSVRQIDATFV 315
>gi|55742306|ref|NP_001006731.1| protein phosphatase 1 regulatory subunit 7 [Xenopus (Silurana)
tropicalis]
gi|82236008|sp|Q6DIQ3.1|PP1R7_XENTR RecName: Full=Protein phosphatase 1 regulatory subunit 7; AltName:
Full=Protein phosphatase 1 regulatory subunit 22
gi|49670663|gb|AAH75482.1| protein phosphatase 1, regulatory subunit 7 [Xenopus (Silurana)
tropicalis]
Length = 346
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/259 (55%), Positives = 193/259 (74%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L TL EL+LYDNQ+ I NL+TL +L+ILDLSFN +R I+G
Sbjct: 86 VKTLCLRQNLIKLIENLEQLVTLTELDLYDNQIRKIGNLETLRDLQILDLSFNLLRRIEG 145
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L++L++LYL +NKIS+IEN L +L++LELG N++R+IENLD L L+ L+LGKNK
Sbjct: 146 LESLSHLQRLYLVNNKISRIENFGTLTQLRLLELGSNRLRVIENLDSLRELDSLFLGKNK 205
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS+NG+ IE L +N KL TL
Sbjct: 206 ITKLQNLETLTNLTVLSVQSNRLTKIEGLQNLVNLRELYLSDNGIQVIEGLENNNKLTTL 265
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI HL+ELQEFW+NDN V +W+ + L LQT+YL+RNP+ +D Y
Sbjct: 266 DLASNRIKRIENIKHLSELQEFWMNDNLVENWSDLEELSGAPGLQTVYLERNPLQKDAQY 325
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 326 RRKIMLALPSVRQIDATFV 344
>gi|390465017|ref|XP_002750023.2| PREDICTED: uncharacterized protein LOC100391351 [Callithrix
jacchus]
Length = 746
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/259 (55%), Positives = 194/259 (74%), Gaps = 1/259 (0%)
Query: 61 IERLLLRWNLIKKIENI-HMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++ L LR NLIK IE + L +L+EL+L DNQ+ IENL+ L LEILD+SFN +R I+
Sbjct: 485 VKTLCLRQNLIKCIERVVEELQSLRELDLXDNQIKKIENLEALTELEILDISFNLLRNIE 544
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
G+D L L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKN
Sbjct: 545 GVDKLTQLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKN 604
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL
Sbjct: 605 KITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTM 664
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPN 299
LD+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP
Sbjct: 665 LDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQ 724
Query: 300 YRRKIKLVCPWIVQIDATL 318
YRRK+ L P + QIDAT
Sbjct: 725 YRRKVMLALPSVRQIDATF 743
>gi|328791867|ref|XP_396616.3| PREDICTED: protein phosphatase 1 regulatory subunit 7 [Apis
mellifera]
Length = 311
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 158/259 (61%), Positives = 196/259 (75%), Gaps = 7/259 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I RL WNLIKKIEN+ LTTL ELEL DNQ+ +IENLD L+NLE+LDLSFNRI++I+G
Sbjct: 59 IRRLCFTWNLIKKIENLDTLTTLVELELRDNQIVIIENLDVLVNLELLDLSFNRIKKIEG 118
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L++L NL+KL+L SNKI IEN+ HLK L LELGDNKIR I NL+GL NL L+LGKNK
Sbjct: 119 LENLLNLQKLFLSSNKIQCIENLSHLKNLITLELGDNKIREIINLEGLENLTNLFLGKNK 178
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I NL L L +LSLQ NR+ IENLE L NL Q+YLSENG +SN
Sbjct: 179 ITKIKNLGCLQNLQLLSLQSNRITKIENLEELKNLDQIYLSENG-------ISNIXXXXX 231
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A NKI I+NI HL +L+EFWIN+N++ +W T+ L NK+LQT+YL+ NP+A+D NY
Sbjct: 232 DLANNKIKKIENIEHLEDLEEFWINNNEIEEWTTIENLALNKKLQTVYLEHNPIAKDANY 291
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKIKL+ PW+VQ+DATL
Sbjct: 292 RRKIKLLLPWLVQLDATLC 310
>gi|196007970|ref|XP_002113851.1| hypothetical protein TRIADDRAFT_26327 [Trichoplax adhaerens]
gi|190584255|gb|EDV24325.1| hypothetical protein TRIADDRAFT_26327, partial [Trichoplax
adhaerens]
Length = 279
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/258 (56%), Positives = 190/258 (73%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E+L LR NLIK+IE I MLTTL EL+LYDNQL IEN+DTL+NL LDLSFN I++I+
Sbjct: 20 VEKLCLRQNLIKRIEAIDMLTTLTELDLYDNQLEKIENIDTLVNLRQLDLSFNGIKKIEN 79
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +E LYLC+N+I IEN+++LK+LK+LELG NKIR IE L NL LYLG+NK
Sbjct: 80 LHQQDKVEDLYLCNNRIKVIENLENLKELKMLELGSNKIRKIEGFQNLQNLTSLYLGRNK 139
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + + L L LS+QCNR+ ++ L L NL +LY+S+NG+ TIE L + KL L
Sbjct: 140 IASFEGICCLRGLKTLSIQCNRIESLLGLSELVNLEELYVSDNGIKTIEGLENLTKLTIL 199
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
DVA N+IS IQN+ HLT L+E W+N+NQV DWN V L+N K+++TIYL+ NP+A DP Y
Sbjct: 200 DVAANRISKIQNLGHLTLLEELWMNNNQVQDWNDVKELDNCKKIKTIYLEANPIASDPMY 259
Query: 301 RRKIKLVCPWIVQIDATL 318
RRK+KL P + QIDATL
Sbjct: 260 RRKLKLALPSLTQIDATL 277
>gi|213515292|ref|NP_001133060.1| protein phosphatase 1 regulatory subunit 7 [Salmo salar]
gi|197631781|gb|ACH70614.1| protein phosphatase 1 regulatory (inhibitor) subunit 7 [Salmo
salar]
Length = 345
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 139/255 (54%), Positives = 194/255 (76%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L LR NLIK IEN+ ML TLKEL+LYDNQ+ +ENL TL L+ LD+SFN +R+++GL+
Sbjct: 88 LSLRQNLIKTIENLEMLVTLKELDLYDNQICKLENLQTLKELDQLDVSFNLLRKVEGLEC 147
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L L+KL+L NKIS I N+DHL L++LELG N+IR+IENLD L++L L+LG NKI++
Sbjct: 148 LTGLKKLFLLHNKISHIANLDHLTGLEMLELGSNRIRLIENLDRLSSLTSLFLGTNKITQ 207
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ +L L L +LS+Q NR+ +E L+ L NL +LYLS NG+ IE L +N+KL TLD+A
Sbjct: 208 LQHLEGLHNLTVLSIQSNRITKMEGLQGLVNLKELYLSHNGIEVIEGLENNKKLTTLDIA 267
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRK 303
N++ I+NI+HLT+LQEFW+NDNQ+ +W+ ++ L+++ L+T+YL+RNP+ +DP YRRK
Sbjct: 268 ANRVKKIENISHLTDLQEFWMNDNQLENWSDLDELKSSNALETVYLERNPLQKDPQYRRK 327
Query: 304 IKLVCPWIVQIDATL 318
I L P + QIDAT
Sbjct: 328 IMLALPTVRQIDATF 342
>gi|332027124|gb|EGI67219.1| Protein phosphatase 1 regulatory subunit 7 [Acromyrmex echinatior]
Length = 329
Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 155/259 (59%), Positives = 199/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL WNLIKKIEN+ L +L ELEL DNQ+ IENLD L+NLE+LDLSFNRI++I+G
Sbjct: 61 VRRLCFTWNLIKKIENLDTLISLVELELRDNQIITIENLDALLNLELLDLSFNRIKKIEG 120
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L NL+KL+L SNKI +IEN+ HL L LELGDNKIR IENL+GL NL L+LGKNK
Sbjct: 121 LSNLLNLQKLFLSSNKILQIENISHLTNLVTLELGDNKIREIENLEGLENLTNLFLGKNK 180
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I NL +L L +LSLQ NR+ IEN+E L L QLYLSENG+ IE + + +L TL
Sbjct: 181 ITKIQNLENLKNLTLLSLQSNRITKIENIEELKKLNQLYLSENGIMCIEGIENCPELTTL 240
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A NKI IQN+ HL L++FW+N+N++ DWNT+ L NKQLQT+YL+ NP+A++PNY
Sbjct: 241 DLANNKIKKIQNMDHLESLEDFWMNNNEIEDWNTLESLTANKQLQTVYLEHNPIAKEPNY 300
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L+ PW+ Q+DATL
Sbjct: 301 RRKVMLLLPWLEQLDATLC 319
>gi|195391500|ref|XP_002054398.1| GJ24429 [Drosophila virilis]
gi|194152484|gb|EDW67918.1| GJ24429 [Drosophila virilis]
Length = 328
Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 155/259 (59%), Positives = 199/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IERL LRWNLIKKIEN+ ML TL ELELYDNQ+T IENLD L+NLEILDLSFNR+ +I+
Sbjct: 63 IERLYLRWNLIKKIENLDMLKTLLELELYDNQITKIENLDKLVNLEILDLSFNRLTKIEN 122
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L LEKLY +NK++ IENV L L +LELGDNK++ IEN++ L NL +L+LGKNK
Sbjct: 123 LDKLLKLEKLYFVANKLTVIENVGMLTNLTMLELGDNKLKKIENIETLVNLRQLFLGKNK 182
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL +L L ILSLQ NR+ IENLE LTNL +LY+SENG+ TIENL N+ L+TL
Sbjct: 183 IAKIENLDTLVNLEILSLQANRIVKIENLEKLTNLKELYISENGIETIENLSENKNLDTL 242
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N++ +I N+ L +L+E W+NDN + +W + VL+ NK LQTIYL+ NPVA D Y
Sbjct: 243 DLAKNRLKLIGNLEALEQLEEIWLNDNGIDNWKNLEVLKMNKSLQTIYLEHNPVATDIRY 302
Query: 301 RRKIKLVCPWIVQIDATLA 319
R K++ + P + +IDATL
Sbjct: 303 RSKLRDILPHLQKIDATLC 321
>gi|442758579|gb|JAA71448.1| Putative protein phosphatase 1 regulatory subunit [Ixodes ricinus]
Length = 315
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 157/303 (51%), Positives = 211/303 (69%), Gaps = 19/303 (6%)
Query: 36 DNPDEESEAETTESKAEDEE--SKEV-----------------CIERLLLRWNLIKKIEN 76
D P E+ E TE A D E + EV C+E L+LR NLIKKIEN
Sbjct: 11 DKPKEDKGPELTEISAADLEPDATEVDFNHSRIGKLENLETLRCVEVLILRENLIKKIEN 70
Query: 77 IHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNK 136
I MLTTLKE+E YDNQ+T IENLD+L+NLEILD+SFNR+ I+ L +L L+KL+L +NK
Sbjct: 71 ISMLTTLKEVEFYDNQITKIENLDSLVNLEILDISFNRLSRIENLHNLVKLKKLFLVNNK 130
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
+SKIEN++ L L++LELG NKIR+IENLD L NL+ L+LGKN+IS+++NL L KL +L
Sbjct: 131 LSKIENLEKLVNLEMLELGSNKIRVIENLDSLVNLKNLFLGKNRISKLENLERLEKLELL 190
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
S+Q NR+ +E LE L LY+S NG+ IENL +N KLETLD+A N+I ++N+ HL
Sbjct: 191 SIQSNRIVKLEGLEKNRELCHLYISHNGIEQIENLENNTKLETLDLAANRIKHLKNLDHL 250
Query: 257 TELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
++EFW NDNQ+ + + VL++ +L T+YL NP+ ++P YRRKI +V P + QIDA
Sbjct: 251 VNIEEFWFNDNQIESFEEIEVLKHFPKLATVYLANNPIEKNPMYRRKIMMVSPTVTQIDA 310
Query: 317 TLA 319
T+
Sbjct: 311 TMC 313
>gi|226372416|gb|ACO51833.1| phosphatase 1 regulatory subunit 7 [Rana catesbeiana]
Length = 345
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 141/259 (54%), Positives = 189/259 (72%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IE + L TL EL+LYDNQ+ VI+NL+ L L+ILDLSFN ++ I+G
Sbjct: 85 VKTLCLRQNLIKVIETLEQLVTLTELDLYDNQIRVIQNLENLSQLQILDLSFNLLKRIEG 144
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L L++LYL +NKIS+IE + L KL++LELG N+IR IENLD L +L+ L+LGKNK
Sbjct: 145 LESLTQLQRLYLVNNKISRIEALSSLTKLRLLELGSNRIREIENLDTLRDLDSLFLGKNK 204
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ +L+ L +LS+Q NRL IE L++L NL +LYLS+NG+ +E L +N KL TL
Sbjct: 205 ITKLQGGEALSNLTVLSVQSNRLTKIEGLQSLVNLRELYLSDNGIQVLEGLENNTKLTTL 264
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
DVA N+I I+NI HLTELQEFW+NDN V +W + L + LQT+YL+RNP+ +D Y
Sbjct: 265 DVASNRIKRIENIRHLTELQEFWMNDNLVDNWADLEELSGAQGLQTVYLERNPLQKDNQY 324
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRKI L P + QIDAT
Sbjct: 325 RRKIMLALPCVRQIDATFV 343
>gi|392884304|gb|AFM90984.1| protein phosphatase 1 regulatory subunit 7-like protein
[Callorhinchus milii]
Length = 350
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/258 (56%), Positives = 197/258 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L LR NLIK IEN+ LTTL+EL+LYDNQ+ VIENL L +LEILDLSFN +R++ G
Sbjct: 90 VEVLCLRQNLIKMIENLDHLTTLRELDLYDNQIKVIENLQVLKDLEILDLSFNILRKVDG 149
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L L+KL+L +NKI+K+EN+ HL++L +LELG N+IR+IEN+D L + L+LGKNK
Sbjct: 150 LEGLTKLKKLFLLNNKITKMENIGHLEQLDLLELGSNRIRVIENIDILKKMTSLFLGKNK 209
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL LT L +LS+Q NRL IE +++L NL +LYLS NG+ IE L +N+KL T+
Sbjct: 210 ITKLQNLDGLTNLTVLSIQSNRLTKIEGMQSLVNLQELYLSHNGIEVIEGLENNKKLTTV 269
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+N K LQT+Y + NP+ +DP Y
Sbjct: 270 DIANNRIKKIENISHLTELQEFWMNDNLIEQWSDLDELKNAKNLQTVYFEGNPLQKDPQY 329
Query: 301 RRKIKLVCPWIVQIDATL 318
RRK+ L P I QIDAT
Sbjct: 330 RRKVMLSLPSIRQIDATF 347
>gi|391326833|ref|XP_003737915.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like
[Metaseiulus occidentalis]
Length = 313
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/285 (52%), Positives = 196/285 (68%), Gaps = 3/285 (1%)
Query: 37 NPDEESEAETTESKAEDEESKEVC--IERLLLRWNLIKKIENIHMLTTLKELELYDNQLT 94
+P E E + S+ + + EV I L R NLIKKIEN++ LTTL ELELYDNQ+T
Sbjct: 28 DPSSE-EVDFNHSRITEIQGLEVLQNIRVLGFRNNLIKKIENLNSLTTLVELELYDNQIT 86
Query: 95 VIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLEL 154
IENLD+L+NLE+LDLSFNR+ I+ L L L+KLY +N+ISKIEN++ L L++LEL
Sbjct: 87 KIENLDSLVNLEVLDLSFNRLSVIENLSSLRKLKKLYFVNNRISKIENLEALTDLRLLEL 146
Query: 155 GDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTN 214
G N+IR+IENL+ LTNL ELY+GKNKIS++ L +L L LS Q NRL IE L+
Sbjct: 147 GANRIRVIENLETLTNLTELYVGKNKISKLQGLENLVNLETLSAQSNRLTCIEGLDNCLK 206
Query: 215 LTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L LYLS NG+ ++NL +N L TLD A NKI + ++HL EL EFW N N + DW+
Sbjct: 207 LKGLYLSHNGIEELQNLQNNRDLRTLDCAANKIKRLTGVSHLKELTEFWFNHNLIEDWHE 266
Query: 275 VNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDATLA 319
V L +L T+YL+ NP+A+DP+YRRKI L+ P + QIDATL
Sbjct: 267 VETLSEFPKLDTVYLEGNPIARDPSYRRKIMLIAPVVNQIDATLC 311
>gi|195349133|ref|XP_002041101.1| GM15226 [Drosophila sechellia]
gi|194122706|gb|EDW44749.1| GM15226 [Drosophila sechellia]
Length = 326
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 151/259 (58%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IERL LRWNLIKKIEN+ L TL ELELYDNQ+T IENLD L LE+LD+SFNR+ +I+
Sbjct: 63 IERLFLRWNLIKKIENLSSLKTLIELELYDNQITQIENLDDLTQLEVLDISFNRLTKIEN 122
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L NLEK+Y SN+I++IEN++ L L +LELGDNK++ IEN++ L NL +L+LGKNK
Sbjct: 123 LDKLVNLEKVYFVSNRITQIENLEMLTNLTMLELGDNKLKKIENIEMLVNLRQLFLGKNK 182
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL +L L ILSLQ NR+ IENLE L NL +LY+SENG+ TIENL N KLETL
Sbjct: 183 IAKIENLDTLVNLEILSLQANRIVKIENLEKLANLRELYVSENGVETIENLSENTKLETL 242
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N++ I N+ L L+E W+N N V DW + +L+ NK LQTIYL+ NP+A+D Y
Sbjct: 243 DLAKNRLKGIANLEKLELLEELWLNHNGVDDWKDIELLKVNKSLQTIYLEYNPLAKDVRY 302
Query: 301 RRKIKLVCPWIVQIDATLA 319
R K++ + P + +IDATL
Sbjct: 303 RSKLRDILPQLQKIDATLC 321
>gi|21358617|ref|NP_650619.1| sds22 [Drosophila melanogaster]
gi|7300250|gb|AAF55413.1| sds22 [Drosophila melanogaster]
gi|17944820|gb|AAL48476.1| GM06266p [Drosophila melanogaster]
gi|21429866|gb|AAM50611.1| GH07711p [Drosophila melanogaster]
gi|220943112|gb|ACL84099.1| sds22-PA [synthetic construct]
gi|220953254|gb|ACL89170.1| sds22-PA [synthetic construct]
Length = 326
Score = 270 bits (690), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 151/259 (58%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IERL LRWNLIKKIEN+ L TL ELELYDNQ+T IENLD L +LE+LD+SFNR+ +I+
Sbjct: 63 IERLFLRWNLIKKIENLSSLKTLIELELYDNQITKIENLDDLPHLEVLDISFNRLTKIEN 122
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L LEK+Y SN+I++IEN+D L L +LELGDNK++ IEN++ L NL +L+LGKNK
Sbjct: 123 LDKLVKLEKVYFVSNRITQIENLDMLTNLTMLELGDNKLKKIENIEMLVNLRQLFLGKNK 182
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL +L L ILSLQ NR+ IENLE L NL +LY+SENG+ TIENL N KLETL
Sbjct: 183 IAKIENLDTLVNLEILSLQANRIVKIENLEKLANLRELYVSENGVETIENLSENTKLETL 242
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N++ I N+ L L+E W+N N V DW + +L+ NK LQTIYL+ NP+A+D Y
Sbjct: 243 DLAKNRLKGIANLEKLELLEELWLNHNGVDDWKDIELLKVNKALQTIYLEYNPLAKDVRY 302
Query: 301 RRKIKLVCPWIVQIDATLA 319
R K++ + P + +IDATL
Sbjct: 303 RSKLRDILPQLQKIDATLC 321
>gi|392879914|gb|AFM88789.1| protein phosphatase 1 regulatory subunit 7-like protein
[Callorhinchus milii]
gi|392884270|gb|AFM90967.1| protein phosphatase 1 regulatory subunit 7-like protein
[Callorhinchus milii]
Length = 350
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/258 (55%), Positives = 197/258 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ LTTL+EL+LYDNQ+ VIENL L +LEILDLSFN +R++ G
Sbjct: 90 VKVLCLRQNLIKMIENLDHLTTLRELDLYDNQIKVIENLQVLKDLEILDLSFNILRKVDG 149
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L L+KL+L +NKI+K+EN+ HL++L +LELG N+IR+IEN+D L + L+LGKNK
Sbjct: 150 LEGLTKLKKLFLLNNKITKMENIGHLEQLDLLELGSNRIRVIENIDILKKMTSLFLGKNK 209
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL LT L +LS+Q NRL IE +++L NL +LYLS NG+ IE L +N+KL T+
Sbjct: 210 ITKLQNLDGLTNLTVLSIQSNRLTKIEGMQSLVNLQELYLSHNGIEVIEGLENNKKLTTV 269
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+N K LQT+Y + NP+ +DP Y
Sbjct: 270 DIANNRIKKIENISHLTELQEFWMNDNLIEQWSDLDELKNAKNLQTVYFEGNPLQKDPQY 329
Query: 301 RRKIKLVCPWIVQIDATL 318
RRK+ L P I QIDAT
Sbjct: 330 RRKVMLSLPSIRQIDATF 347
>gi|387915798|gb|AFK11508.1| protein phosphatase 1 regulatory subunit 7-like protein
[Callorhinchus milii]
Length = 350
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/258 (55%), Positives = 197/258 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ LTTL+EL+LYDNQ+ VIENL L +LEILDLSFN +R++ G
Sbjct: 90 VKVLCLRQNLIKMIENLDHLTTLRELDLYDNQIKVIENLQVLKDLEILDLSFNILRKVDG 149
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L L+KL+L +NKI+K+EN+ HL++L +LELG N+IR+IEN+D L + L+LGKNK
Sbjct: 150 LEGLTKLKKLFLLNNKITKMENIGHLEQLDLLELGSNRIRVIENIDILKKMTSLFLGKNK 209
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL LT L +LS+Q NRL IE +++L NL +LYLS NG+ IE L +N+KL T+
Sbjct: 210 ITKLQNLDGLTNLTVLSIQSNRLTKIEGMQSLVNLQELYLSHNGIEVIEGLENNKKLTTV 269
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+N K LQT+Y + NP+ +DP Y
Sbjct: 270 DIANNRIKKIENISHLTELQEFWMNDNLIEQWSDLDELKNAKNLQTVYFEGNPLQKDPQY 329
Query: 301 RRKIKLVCPWIVQIDATL 318
RRK+ L P I QIDAT
Sbjct: 330 RRKVMLSLPSIRQIDATF 347
>gi|195570165|ref|XP_002103079.1| GD19152 [Drosophila simulans]
gi|194199006|gb|EDX12582.1| GD19152 [Drosophila simulans]
Length = 326
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/259 (57%), Positives = 195/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IERL LRWNLIKKIEN+ L TL ELELYDNQ+T IENLD L LE+LD+SFNR+ +I+
Sbjct: 63 IERLFLRWNLIKKIENLSSLKTLIELELYDNQITQIENLDDLTQLEVLDISFNRLTKIEN 122
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L NLEK+Y SN+I++IEN++ L L +LELGDNK++ IEN++ L NL +L+LGKNK
Sbjct: 123 LDKLVNLEKVYFVSNRITQIENLEMLTNLTMLELGDNKLKKIENIEMLVNLRQLFLGKNK 182
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL +L L ILSLQ NR+ IENLE L NL +LY+SENG+ IENL N KLETL
Sbjct: 183 IAKIENLDTLVNLEILSLQANRIVKIENLEKLANLRELYVSENGVEIIENLSENTKLETL 242
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N++ I N+ L L+E W+N N V DW + +L+ NK LQTIYL+ NP+A+D Y
Sbjct: 243 DLAKNRLKGIANLEKLELLEELWLNHNGVDDWKDIELLKVNKSLQTIYLEYNPLAKDVRY 302
Query: 301 RRKIKLVCPWIVQIDATLA 319
R K++ + P + +IDATL
Sbjct: 303 RSKLRDILPQLQKIDATLC 321
>gi|346468741|gb|AEO34215.1| hypothetical protein [Amblyomma maculatum]
Length = 428
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/258 (54%), Positives = 192/258 (74%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IE L+ R NLIKKIEN+HML TLKELE YDNQ+T IENLD L+NLEILD+SFNR+ I+
Sbjct: 168 IEILIFRNNLIKKIENVHMLVTLKELEFYDNQITKIENLDALVNLEILDISFNRLTRIEN 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L L+KL+L +N+I+KIEN++ L L++LELG N+I++IENL L NL+ L+LGKN+
Sbjct: 228 LEKLVKLKKLFLVNNRITKIENIEKLVNLEMLELGSNRIKVIENLGTLVNLKSLFLGKNR 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++++NL L +L +LS+Q NR+ +E L NL LY+S NG+ IENL +N KLETL
Sbjct: 288 ITKLENLEPLKQLELLSIQSNRIVKLEGLHENRNLCHLYMSHNGIEKIENLENNVKLETL 347
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I + NI HL ++EFW NDN++ + V VL N +L T+YL NP+ +DP Y
Sbjct: 348 DLAANRIKHLTNIKHLVNIEEFWFNDNEIESFEEVEVLRNFPKLATVYLHNNPIEKDPMY 407
Query: 301 RRKIKLVCPWIVQIDATL 318
RRKI ++ P + QIDAT+
Sbjct: 408 RRKIMMISPTVTQIDATM 425
>gi|6684160|gb|AAF23505.1|AF214664_1 putative mitotic protein phosphatase 1 regulator [Drosophila
melanogaster]
Length = 326
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/259 (57%), Positives = 195/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IERL LRWNLIKKIEN+ L TL ELELYDNQ+T IENLD L +LE+LD+SFNR+ +I+
Sbjct: 63 IERLFLRWNLIKKIENLSSLKTLIELELYDNQITKIENLDDLPHLEVLDISFNRLTKIEN 122
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L LEK+Y SN+I++IEN+D L L +LELGDNK++ IEN++ L NL +L+LGKNK
Sbjct: 123 LDKLVKLEKVYFVSNRITQIENLDMLTNLTMLELGDNKLKKIENIEMLVNLRQLFLGKNK 182
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL +L L ILSLQ NR+ IE LE L NL +LY+SENG+ TIENL N KLETL
Sbjct: 183 IAKIENLDTLVNLEILSLQANRIVKIETLEKLANLRELYVSENGVETIENLSENTKLETL 242
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N++ I N+ L L+E W+N N V DW + +L+ NK LQTIYL+ NP+A+D Y
Sbjct: 243 DLAKNRLKGIANLEKLELLEELWLNHNGVDDWKDIELLKVNKALQTIYLEYNPLAKDVRY 302
Query: 301 RRKIKLVCPWIVQIDATLA 319
R K++ + P + +IDATL
Sbjct: 303 RSKLRDILPQLQKIDATLC 321
>gi|195501945|ref|XP_002098013.1| sds22 [Drosophila yakuba]
gi|194184114|gb|EDW97725.1| sds22 [Drosophila yakuba]
Length = 326
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 150/259 (57%), Positives = 194/259 (74%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IERL LRWNLIKKIEN+ L TL ELELYDNQ+T IENLD L LE+LD+SFNR+ +I+
Sbjct: 63 IERLFLRWNLIKKIENLSSLKTLIELELYDNQITKIENLDDLTELEVLDISFNRLTKIEN 122
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L LEK+Y SN+I++IEN+ L L +LELGDNK++ IEN++ L NL +L+LGKNK
Sbjct: 123 LDKLVKLEKVYFVSNRITQIENLGMLTNLTMLELGDNKLKKIENIEMLVNLRQLFLGKNK 182
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL +L L ILSLQ NR+ IENLE L NL +LY+SENG+ TIENL N KLETL
Sbjct: 183 IAKIENLDTLVNLEILSLQANRIVKIENLEKLANLRELYVSENGVETIENLSENTKLETL 242
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N++ I N+ L L+E W+N N V DW + +L+ NK LQTIYL+ NP+A+D Y
Sbjct: 243 DLAKNRLKGIANLEKLEHLEELWLNHNGVDDWKNIELLKVNKALQTIYLEYNPLAKDVRY 302
Query: 301 RRKIKLVCPWIVQIDATLA 319
R K++ + P + +IDATL
Sbjct: 303 RSKLRDILPQLQKIDATLC 321
>gi|194900454|ref|XP_001979772.1| GG22169 [Drosophila erecta]
gi|190651475|gb|EDV48730.1| GG22169 [Drosophila erecta]
Length = 326
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 149/259 (57%), Positives = 194/259 (74%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IERL LRWNLIKKIEN+ L TL ELELYDNQ+T IENLD L LE+LD+SFNR+ +I+
Sbjct: 63 IERLFLRWNLIKKIENLSTLKTLIELELYDNQITKIENLDDLTQLEVLDISFNRLTKIEN 122
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L LEK+Y SN+I++IEN+ L L +LELGDNK++ IEN++ L NL +L+LGKNK
Sbjct: 123 LDKLVKLEKVYFVSNRITEIENLGMLTNLTMLELGDNKLKKIENIEMLVNLRQLFLGKNK 182
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL +L L ILSLQ NR+ IENLE L +L +LY+SENG+ TIENL N KLETL
Sbjct: 183 IAKIENLDTLVNLEILSLQANRIVKIENLEKLASLRELYISENGVETIENLSENTKLETL 242
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N++ I N+ L L+E W+N N V DW + +L+ NK LQTIYL+ NP+A+D Y
Sbjct: 243 DLAKNRLKGIANLEKLELLEELWLNHNGVDDWKNIELLKVNKSLQTIYLEYNPLAKDVRY 302
Query: 301 RRKIKLVCPWIVQIDATLA 319
R K++ + P + +IDATL
Sbjct: 303 RSKLRDILPQLQKIDATLC 321
>gi|405970859|gb|EKC35726.1| Protein phosphatase 1 regulatory subunit 7 [Crassostrea gigas]
Length = 333
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/264 (56%), Positives = 187/264 (70%), Gaps = 6/264 (2%)
Query: 62 ERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
E L LR NLIKKIE + + TL +L+LYDNQ+T IENL+ L+NLE+LDLSFNRI +++GL
Sbjct: 69 ESLCLRQNLIKKIEGLCSVPTLTDLDLYDNQITKIENLEALVNLEVLDLSFNRIPKVEGL 128
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
L L+KL+L NKI K+ENV HL L++LE G NKIR IE + LTN+ LY+GKNKI
Sbjct: 129 QTLTKLKKLFLIHNKIHKMENVGHLVHLEMLEFGSNKIRAIEGISTLTNITHLYIGKNKI 188
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+RI L +L L LS+Q NRLR IE LE L NL +LY S NG+ +E L N KL TLD
Sbjct: 189 TRIQGLNTLVNLRCLSIQSNRLRKIEGLEELVNLEELYASHNGIEKVEGLEKNVKLTTLD 248
Query: 242 VAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV------A 295
+A N I I+N+ HL EL+EFW NDN+VS W+ + LE+ K+L T+Y++RNP+
Sbjct: 249 LASNFIPKIENVGHLAELEEFWFNDNKVSSWDDLKELESLKKLATVYMERNPLYYDSEGK 308
Query: 296 QDPNYRRKIKLVCPWIVQIDATLA 319
DPNYRRKIKL P I QIDATL
Sbjct: 309 PDPNYRRKIKLALPQIQQIDATLC 332
>gi|317757784|ref|NP_001187986.1| phosphatase 1 regulatory subunit 7 [Ictalurus punctatus]
gi|308324523|gb|ADO29396.1| phosphatase 1 regulatory subunit 7 [Ictalurus punctatus]
Length = 345
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 141/255 (55%), Positives = 193/255 (75%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L LR NLIK IEN+ L +L+EL+LYDNQ+ +ENL L LE LD+SFN +R+I+GL+
Sbjct: 88 LSLRQNLIKNIENLESLVSLRELDLYDNQIRKLENLQALTELEQLDVSFNLLRKIEGLER 147
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L L+KL+L NKI+ I N++HL L++LELG N+IRIIENLD LT+L+ L+LG NKI++
Sbjct: 148 LTKLKKLFLLHNKITNISNLEHLTGLQMLELGSNRIRIIENLDTLTSLDSLFLGTNKIAQ 207
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ NL L L +LS+Q NR+ +E L+ L NL +LYLS NG+ IE L +N+KL TLD+A
Sbjct: 208 LQNLDGLYNLTVLSIQSNRITKLEGLQNLGNLKELYLSHNGIEVIEGLENNKKLTTLDIA 267
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRK 303
N+I I+NI+HLT+LQEFW+NDNQ+ +W+ ++ L+N K L+T+YL+RNP+ +DP YRRK
Sbjct: 268 ANRIKKIENISHLTDLQEFWMNDNQIENWSDLDELKNAKGLETVYLERNPLQKDPQYRRK 327
Query: 304 IKLVCPWIVQIDATL 318
I L P + QIDAT
Sbjct: 328 IMLALPSVRQIDATF 342
>gi|198451367|ref|XP_001358334.2| GA19179 [Drosophila pseudoobscura pseudoobscura]
gi|198131457|gb|EAL27472.2| GA19179 [Drosophila pseudoobscura pseudoobscura]
Length = 327
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/259 (56%), Positives = 195/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I+RL LRWNLIKKIEN+ ML TL ELELYDNQ+T +ENL+ L LE+LDLSFNR+ +I+
Sbjct: 64 IQRLFLRWNLIKKIENLSMLKTLVELELYDNQITKVENLEELTKLEMLDLSFNRLTKIEN 123
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L NLEKLY +N+I+ IEN+ L L +LELGDNK++ I+N+D L NL +L+LGKNK
Sbjct: 124 LDALVNLEKLYFVANRITVIENLGMLTSLTMLELGDNKLKKIQNIDTLVNLRQLFLGKNK 183
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL +L L ILSLQ NR+ IENLE LTNL +LY+SENG+ IENL N+ LETL
Sbjct: 184 IAKIENLDTLVNLEILSLQANRIVKIENLEKLTNLKELYISENGIEVIENLEENKNLETL 243
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N++ + N+ L L+E W+N N + DW + +L+ NK LQTIYL+ NP+A+D Y
Sbjct: 244 DLAKNRLKAVGNLETLENLEELWLNHNGIDDWKNIELLKGNKALQTIYLESNPLAKDVRY 303
Query: 301 RRKIKLVCPWIVQIDATLA 319
R K++ + P + +IDAT+
Sbjct: 304 RSKLRDILPQLQKIDATMC 322
>gi|156395202|ref|XP_001637000.1| predicted protein [Nematostella vectensis]
gi|156224109|gb|EDO44937.1| predicted protein [Nematostella vectensis]
Length = 310
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 135/260 (51%), Positives = 187/260 (71%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
C++ L LR N IKK+EN+ LT+L+EL+ YDNQ++ IENLD L+NL ILDLSFN I+ I+
Sbjct: 50 CVKSLCLRRNEIKKLENLETLTSLEELDFYDNQISKIENLDRLVNLRILDLSFNVIKVIE 109
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L+ L LEKLYL NKI +IE ++HL +L ++ELG NKIR++E L+ LT LE L++GKN
Sbjct: 110 NLNSLTKLEKLYLVQNKIGRIEGLEHLTELTMVELGANKIRVLEGLEHLTKLESLFVGKN 169
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + NL+ L L +LS+Q NR+ ++ LE L +L +LY+S NG+ I+ L S KL T
Sbjct: 170 KITELQNLSGLCSLKVLSIQSNRIVELKGLEHLDSLEELYISHNGIEEIKGLESLTKLNT 229
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPN 299
LD+A N+I I N+ HL L+EFW NDNQ+ W ++ L +L T+YL+RNP+++D
Sbjct: 230 LDLASNRIKRISNVGHLLNLEEFWFNDNQLEHWEDLDELAKCPKLHTVYLERNPLSRDTA 289
Query: 300 YRRKIKLVCPWIVQIDATLA 319
YRRK+KL P + QIDATL
Sbjct: 290 YRRKVKLALPALKQIDATLC 309
>gi|195144238|ref|XP_002013103.1| GL23568 [Drosophila persimilis]
gi|194102046|gb|EDW24089.1| GL23568 [Drosophila persimilis]
Length = 327
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 195/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I+RL LRWNLIKKIEN+ ML TL ELELYDNQ+T +ENL+ L LE+LDLSFNR+ +I+
Sbjct: 64 IQRLFLRWNLIKKIENLSMLKTLVELELYDNQITKVENLEELTKLEMLDLSFNRLTKIEN 123
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L NLEKLY +N+I+ IEN+ L L +LELGDNK++ I+N+D L NL +L+LGKNK
Sbjct: 124 LDALVNLEKLYFVANRITVIENLGMLTSLTMLELGDNKLKKIQNIDTLVNLRQLFLGKNK 183
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL +L L ILSLQ NR+ IENLE LT+L +LY+SENG+ IENL N+ LETL
Sbjct: 184 IAKIENLDTLVNLEILSLQANRIVKIENLEKLTSLKELYISENGIEVIENLEENKNLETL 243
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N++ + N+ L L+E W+N N + DW + +L+ NK LQTIYL+ NP+A+D Y
Sbjct: 244 DLAKNRLKAVGNLETLENLEELWLNHNGIDDWKNIELLKGNKALQTIYLESNPLAKDVRY 303
Query: 301 RRKIKLVCPWIVQIDATLA 319
R K++ + P + +IDAT+
Sbjct: 304 RSKLRDILPQLQKIDATMC 322
>gi|432107253|gb|ELK32667.1| Protein phosphatase 1 regulatory subunit 7 [Myotis davidii]
Length = 359
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/259 (54%), Positives = 196/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENLDTL LEILD+SFN +R I+G
Sbjct: 99 VKTLCLRQNLIKCIENLEELHSLRELDLYDNQIKKIENLDTLTELEILDISFNLLRNIEG 158
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIEN+ +L++L++LELG N+IR IEN+D LTNL+ L+LGKNK
Sbjct: 159 VDKLTKLKKLFLVNNKINKIENLSNLRQLEMLELGSNRIRAIENIDTLTNLDSLFLGKNK 218
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +L+ L +LS+Q NRL +E L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 219 ITKLQNLDALSNLTVLSIQSNRLTKMEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTML 278
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+NI+HLTEL EFW+NDN + W+ ++ L+ K L+T+ L+ NP+ +DP Y
Sbjct: 279 DIAANRIKKIENISHLTELLEFWMNDNLLESWSDLDELKGAKNLETVSLEGNPLQKDPQY 338
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+ L P + QIDAT
Sbjct: 339 RRKVMLALPSVRQIDATFV 357
>gi|82658210|ref|NP_001032463.1| protein phosphatase 1 regulatory subunit 7 [Danio rerio]
gi|108860897|sp|Q32PL1.1|PP1R7_DANRE RecName: Full=Protein phosphatase 1 regulatory subunit 7; AltName:
Full=Protein phosphatase 1 regulatory subunit 22
gi|79158679|gb|AAI08075.1| Protein phosphatase 1, regulatory (inhibitor) subunit 7 [Danio
rerio]
Length = 345
Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 138/253 (54%), Positives = 192/253 (75%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
LR NLIK+IEN+ L +L+EL+LYDNQ+ +ENL L LE LD+SFN +R+I+GLD L
Sbjct: 90 LRQNLIKRIENLESLVSLRELDLYDNQIRKLENLQALTELEQLDVSFNLLRKIEGLDSLT 149
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
++KL+L NKI+ I N+DHL L++LELG N+IR+IENLD L++LE L+LG NKI+++
Sbjct: 150 KVKKLFLLHNKIASIANLDHLTSLQMLELGSNRIRVIENLDSLSSLESLFLGTNKITQLQ 209
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
NL L L +LS+Q NR+ +E L+ L NL +LYLS NG+ +E L +N+KL TLD+A N
Sbjct: 210 NLDGLHNLTVLSIQSNRITKLEGLQNLVNLRELYLSHNGIEVMEGLENNKKLSTLDIAAN 269
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIK 305
+I I+NI+HLT+L+EFW+NDNQ+ +W ++ L+N K L+T+YL+RNP+ +DP YRRKI
Sbjct: 270 RIKKIENISHLTDLKEFWMNDNQIENWADLDELKNAKGLETVYLERNPLQKDPQYRRKIM 329
Query: 306 LVCPWIVQIDATL 318
L P + QIDAT
Sbjct: 330 LALPSVRQIDATF 342
>gi|355750986|gb|EHH55313.1| hypothetical protein EGM_04495, partial [Macaca fascicularis]
Length = 345
Score = 260 bits (664), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 136/260 (52%), Positives = 189/260 (72%), Gaps = 1/260 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ I+NL+ L LEILD+SFN +R I+G
Sbjct: 84 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIDNLEALTELEILDISFNLLRNIEG 143
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 144 VDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 203
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE-KLET 239
I+++ NL +LT L +LS+Q NRL IE L+ L NL +L S + + + KL
Sbjct: 204 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELQASSPSIACPYPVRAERNKLTM 263
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPN 299
LD+A N+I I+NI+HLTELQEFW+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP
Sbjct: 264 LDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQKDPQ 323
Query: 300 YRRKIKLVCPWIVQIDATLA 319
YRRK+ L P + QIDAT
Sbjct: 324 YRRKVMLALPSVRQIDATFV 343
>gi|194743360|ref|XP_001954168.1| GF18144 [Drosophila ananassae]
gi|190627205|gb|EDV42729.1| GF18144 [Drosophila ananassae]
Length = 327
Score = 259 bits (663), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 149/259 (57%), Positives = 197/259 (76%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IERL LRWNLIKKIEN+ LT+L ELELYDNQ+T IENLD L NLE+LDLSFNR+ +I+
Sbjct: 63 IERLFLRWNLIKKIENLSTLTSLLELELYDNQITKIENLDELTNLELLDLSFNRLTKIEN 122
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L L+K+Y +N+I++IEN+ L L +LELGDNK++ IEN++ L NL +L+LGKNK
Sbjct: 123 LDKLVKLDKIYFVANRITEIENLGMLTNLTMLELGDNKLKKIENIEMLVNLRQLFLGKNK 182
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+RI+NL +L L ILSLQ NR+ IENLE L+NL +LY+SENG+ IENL N+ LETL
Sbjct: 183 IARIENLDTLVNLEILSLQANRIVKIENLEKLSNLRELYISENGIEVIENLSENQNLETL 242
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N++ I N+ L +L+E W+N N V DW + +L+ NK LQTIYL+ NP+A+D Y
Sbjct: 243 DLAKNRLKAIGNLEKLEKLEELWLNHNGVDDWKNIELLKVNKGLQTIYLEYNPIAKDVRY 302
Query: 301 RRKIKLVCPWIVQIDATLA 319
R K++ + P + +IDATL
Sbjct: 303 RSKLRDILPQLQKIDATLC 321
>gi|195443974|ref|XP_002069661.1| GK11642 [Drosophila willistoni]
gi|194165746|gb|EDW80647.1| GK11642 [Drosophila willistoni]
Length = 335
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 152/259 (58%), Positives = 195/259 (75%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IERL LRWNLIKKIEN+ L TL ELELYDNQ+ IENLD L NLEILDLSFNR+ +I+
Sbjct: 69 IERLFLRWNLIKKIENLETLKTLVELELYDNQIVQIENLDQLTNLEILDLSFNRLVKIEN 128
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L LEKLY +NKI+ IENV L L +LELGDNK++ IEN++ L NL EL+LGKNK
Sbjct: 129 LDKLLKLEKLYFVANKITVIENVGMLTGLTMLELGDNKLKKIENIETLVNLRELFLGKNK 188
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL +L L ILSLQ NR+ IENL+ L NL +LY+SENG+ TIENL N++LETL
Sbjct: 189 INKIENLDTLVNLEILSLQANRIVKIENLDKLENLRELYISENGIETIENLDGNKQLETL 248
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+++ I N+ L +L+E W+N+N DW V VL+ NK L+TIYL+ P+A+D Y
Sbjct: 249 DMAKNRLTAIGNLEKLEKLEELWLNNNGFEDWKNVEVLKANKTLETIYLEHTPLAKDIRY 308
Query: 301 RRKIKLVCPWIVQIDATLA 319
R K++ + P + +IDATL
Sbjct: 309 RSKLRDILPQLKKIDATLC 327
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V + L L N I KIEN+ L L+ L L N++ IENLD L NL L +S N I I
Sbjct: 177 VNLRELFLGKNKINKIENLDTLVNLEILSLQANRIVKIENLDKLENLRELYISENGIETI 236
Query: 119 KGLDHLANLEKLYLCSNKISKIEN 142
+ LD LE L + N+++ I N
Sbjct: 237 ENLDGNKQLETLDMAKNRLTAIGN 260
>gi|320169504|gb|EFW46403.1| sds22-PA [Capsaspora owczarzaki ATCC 30864]
Length = 375
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/285 (48%), Positives = 188/285 (65%), Gaps = 2/285 (0%)
Query: 35 LDNPDEESEAETTESKAEDEESKE--VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQ 92
+D P++ +E E ++ E E +E L+L+ NLI++IE I LT L EL+LYDNQ
Sbjct: 86 VDFPEDVTEIEAIHARIRKMEQLERFTSLESLVLKQNLIRRIECIDTLTNLTELDLYDNQ 145
Query: 93 LTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVL 152
+ IE + TL NL ILDLSFN I+ I+GL+ L NL KL+L N+I IE + L KL +L
Sbjct: 146 IDTIEGISTLTNLTILDLSFNNIKVIQGLEPLVNLTKLFLSQNRIKVIEGLSTLTKLTML 205
Query: 153 ELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEAL 212
ELG N IR I+ LD L + ELYLGKNKI+ I NL L L LSLQ NR+ TIENL+ L
Sbjct: 206 ELGANNIREIQGLDTLVEIRELYLGKNKITAIKNLGHLQHLESLSLQSNRIVTIENLDNL 265
Query: 213 TNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDW 272
L QLYLS NG+ I L +N +L LDV N+IS + N+ HL L++FW+N+N++ +W
Sbjct: 266 PQLEQLYLSHNGIQEISGLDANTQLSILDVGSNRISRLANVGHLVSLEDFWLNNNRLENW 325
Query: 273 NTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDAT 317
V++L +L T+Y + NP+A+D YRRK+KL P + Q+DAT
Sbjct: 326 ADVDLLRTCPRLGTVYFEGNPIAKDSAYRRKVKLALPTVFQVDAT 370
>gi|405954126|gb|EKC21650.1| Protein phosphatase 1 regulatory subunit 7 [Crassostrea gigas]
Length = 333
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/264 (56%), Positives = 187/264 (70%), Gaps = 6/264 (2%)
Query: 62 ERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
E L LR NLIKKIE + + TL +L+LYDNQ+T IENL+ L+NLE+LDLSFNRI +++GL
Sbjct: 69 ESLCLRQNLIKKIEGLCSVPTLTDLDLYDNQITKIENLEALVNLEVLDLSFNRIPKVEGL 128
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
L L+KL+L NKI K+ENV HL L++LE G NKIR IE + LTN+ LY+GKNKI
Sbjct: 129 QTLTKLKKLFLIHNKIHKMENVGHLVHLEMLEFGSNKIRAIEGISTLTNITHLYIGKNKI 188
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+RI L +L L LS+Q NRLR IE LE L NL +LY S NG+ +E L N KL TLD
Sbjct: 189 TRIQGLNTLVNLRCLSIQSNRLRKIEGLEELVNLEELYASHNGIEKVEGLEKNVKLTTLD 248
Query: 242 VAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV------A 295
+A N I I+N+ HL EL+EFW NDN+VS W+ + LE+ K+L T+Y++RNP+
Sbjct: 249 LASNFIPKIENVGHLAELEEFWFNDNKVSSWDDLKKLESLKKLATVYMERNPLYYDSEGK 308
Query: 296 QDPNYRRKIKLVCPWIVQIDATLA 319
DPNYRRKIKL P I QIDATL
Sbjct: 309 PDPNYRRKIKLALPQIQQIDATLC 332
>gi|225710150|gb|ACO10921.1| phosphatase 1 regulatory subunit 7 [Caligus rogercresseyi]
Length = 312
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/259 (55%), Positives = 192/259 (74%), Gaps = 1/259 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L LRWNLIK+IEN+ LT L EL+LYDNQ+ IENLD+L+NLE LDLSFNRI++I+G
Sbjct: 54 VETLCLRWNLIKQIENLSSLTRLTELDLYDNQIPRIENLDSLVNLETLDLSFNRIKKIEG 113
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L NL KLYL SNKIS IEN++ L +L++LELGDNKIR +ENL+ L +L+LGKNK
Sbjct: 114 LSNLRNLRKLYLISNKISVIENLEALTELELLELGDNKIRKVENLESQQKLRQLFLGKNK 173
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS+++NL L++LS+Q NR+ +ENLE + L QLY+S+NGLT IE L ++ L
Sbjct: 174 ISKLENL-DFPLLDLLSIQNNRIVKLENLEGIPRLDQLYISQNGLTDIEGLAGIAQVTIL 232
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A NKI + N+ L L+E W N NQ+SDWN V L +K+L+ +YL+ NP+ + +Y
Sbjct: 233 DIATNKIERLDNLDVLETLEELWCNSNQISDWNEVEKLSCHKELKCVYLEHNPIYKSTDY 292
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+KL+ P + QIDATL
Sbjct: 293 RRKVKLIIPSLTQIDATLC 311
>gi|198428058|ref|XP_002125791.1| PREDICTED: similar to protein phosphatase 1, regulatory subunit 7
[Ciona intestinalis]
Length = 331
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 134/260 (51%), Positives = 190/260 (73%), Gaps = 3/260 (1%)
Query: 61 IERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+E L LR NL+K+I+ + L +TL L+LYDN++ IENL+ L+ LE LDLSFN +R I+
Sbjct: 66 VEELCLRNNLLKQIQGLGCLASTLTSLDLYDNRIKKIENLEDLVLLESLDLSFNLMRTIE 125
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
GL++L L+K+YL +NK +KI+N+ HL L +LELGDN+IR IE L+ L NL+ELYLGKN
Sbjct: 126 GLENLVKLKKIYLLTNKFTKIQNLSHLTSLTMLELGDNRIRAIEGLETLKNLQELYLGKN 185
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ I NL+ L L IL+L NR+ IE L+ALTNL +LY+S N + IE L +N L+T
Sbjct: 186 KITTIGNLSELKNLKILALMSNRITKIEGLDALTNLEELYMSHNAIEKIEGLENNTNLQT 245
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV--AQD 297
LDVA NKI+ ++N++HL+EL+EFW NDN++ DWN ++ L+ +L T+YL+ NP+ +
Sbjct: 246 LDVAGNKITRVENLSHLSELEEFWANDNKIHDWNDMDELKKCPKLITVYLEHNPLQTSHA 305
Query: 298 PNYRRKIKLVCPWIVQIDAT 317
YRR++ + P + QIDAT
Sbjct: 306 TQYRRRLMAIMPNLKQIDAT 325
>gi|390336801|ref|XP_003724429.1| PREDICTED: LOW QUALITY PROTEIN: protein phosphatase 1 regulatory
subunit 7-like [Strongylocentrotus purpuratus]
Length = 323
Score = 250 bits (638), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 140/257 (54%), Positives = 190/257 (73%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L LR N IKKIEN LTTL +L+LYDNQL IE L+TL+ L ILDLSFN+IR I+
Sbjct: 63 VETLCLRQNEIKKIENSXTLTTLTDLDLYDNQLKKIEGLETLVELTILDLSFNKIRTIEN 122
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L + +++L +NKISKI+N+ H L +LELGDN+IR +ENLD L NLE L++GKNK
Sbjct: 123 LETLVKIMRIFLINNKISKIDNLSHFTNLNMLELGDNRIRKLENLDTLVNLESLFVGKNK 182
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++++NL LTKL +LS+Q NR+ +E L+A+T+L +LY+S NGL IENL +N L TL
Sbjct: 183 ITKLENLDKLTKLRVLSIQSNRITKLEGLDAVTSLEELYISHNGLEVIENLENNVNLTTL 242
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A NKI+ IQN+ HL L+EFW N+N + W V+ L++ +L+T+YL+ NP+ +D Y
Sbjct: 243 DLAGNKITRIQNVGHLVLLEEFWFNNNLLDHWKDVDQLKSLAKLETVYLEHNPIYKDKMY 302
Query: 301 RRKIKLVCPWIVQIDAT 317
R KIKL P + QIDAT
Sbjct: 303 RNKIKLAVPHLKQIDAT 319
>gi|195433088|ref|XP_002064547.1| GK19075 [Drosophila willistoni]
gi|194160632|gb|EDW75533.1| GK19075 [Drosophila willistoni]
Length = 263
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/259 (54%), Positives = 187/259 (72%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++RL LRWNLIKKIEN+ L +L ELEL DNQ+T IENLD L+NLE LD+SFNR+ I+
Sbjct: 4 LKRLYLRWNLIKKIENLDTLHSLIELELCDNQITKIENLDKLVNLEQLDISFNRLTTIEN 63
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L LE+L+LC+N+I +I+N++ L L +LELGDN++R I+NLD L L LYLGKNK
Sbjct: 64 LMLLIKLERLFLCANRIKEIQNIETLTNLVLLELGDNQLRTIKNLDILIGLRYLYLGKNK 123
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I +I+NL L L +LSLQ NR+R IENLE LT LT+LYLSENG+ IENL L+TL
Sbjct: 124 IRKIENLEKLINLEVLSLQANRIRKIENLENLTKLTELYLSENGIVVIENLEKLINLDTL 183
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N ++ I N+ + +L E W+N N + +W+ + L+ N L+TIYL+ NP+A+D Y
Sbjct: 184 DLAKNFLTDINNLENQEKLNELWLNGNSIENWSCLTKLKENTNLRTIYLEENPLAKDKRY 243
Query: 301 RRKIKLVCPWIVQIDATLA 319
R K++ P + QIDATL
Sbjct: 244 RAKLREQLPNLDQIDATLC 262
>gi|62466117|gb|AAX83388.1| Sds [Schistosoma mansoni]
Length = 327
Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 140/257 (54%), Positives = 184/257 (71%), Gaps = 9/257 (3%)
Query: 72 KKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
KK+EN ++ TL++L++YDNQ+T IENL+ LI L LDLSFNRI+ I+ L++L+NL KL
Sbjct: 67 KKLENFEPISQTLEDLDVYDNQITKIENLECLIKLANLDLSFNRIKRIENLENLSNLRKL 126
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
Y +N ISKIEN+ +LK L++LELG NKIR +ENLD L L +LY GKNKI I+NL +L
Sbjct: 127 YFVNNHISKIENLSNLKDLEMLELGSNKIRKLENLDELEKLTQLYCGKNKIPAIENLDNL 186
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T L ILS+Q NRL I L +L NL QLYLSENG+T IE L + KL+ LD+AYN IS I
Sbjct: 187 TNLTILSIQGNRLTKINGLASLVNLEQLYLSENGITEIEGLETLSKLQILDLAYNFISQI 246
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV--------AQDPNYRR 302
QN+++L L+EFW NDN++SDW + L K+L+T+Y++RNP+ D NYRR
Sbjct: 247 QNMSNLVNLEEFWCNDNKISDWEQLGKLSVLKKLRTLYMERNPIYFLSTDRTKHDSNYRR 306
Query: 303 KIKLVCPWIVQIDATLA 319
KI L P + Q+DA L
Sbjct: 307 KILLSLPNLQQLDANLT 323
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
Query: 125 ANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTN-LEELYLGKNKISR 183
A+ E++YL +I I +D + +++L L +N ++ +EN + ++ LE+L + N+I++
Sbjct: 32 ADDEEIYLEHCRIKCISRLDRFQNVRLLCLRNNLLKKLENFEPISQTLEDLDVYDNQITK 91
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I+NL L KL L L NR++ IENLE L+NL +LY N ++ IENL + + LE L++
Sbjct: 92 IENLECLIKLANLDLSFNRIKRIENLENLSNLRKLYFVNNHISKIENLSNLKDLEMLELG 151
Query: 244 YNKISIIQNIAHLTELQEFWINDNQV 269
NKI ++N+ L +L + + N++
Sbjct: 152 SNKIRKLENLDELEKLTQLYCGKNKI 177
>gi|256079299|ref|XP_002575926.1| protein phosphatases pp1 regulatory subunit [Schistosoma mansoni]
gi|360044875|emb|CCD82423.1| putative protein phosphatases pp1 regulatory subunit [Schistosoma
mansoni]
Length = 327
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/257 (54%), Positives = 184/257 (71%), Gaps = 9/257 (3%)
Query: 72 KKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
KK+EN ++ TL++L++YDNQ+T IENL+ LI L LDLSFNRI+ I+ L++L+NL KL
Sbjct: 67 KKLENFEPISQTLEDLDVYDNQITKIENLECLIKLTNLDLSFNRIKRIENLENLSNLRKL 126
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
Y +N ISKIEN+ +LK L++LELG NKIR +ENLD L L +LY GKNKI I+NL +L
Sbjct: 127 YFVNNHISKIENLSNLKDLEMLELGSNKIRKLENLDELEKLTQLYCGKNKIPAIENLDNL 186
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T L ILS+Q NRL I L +L NL QLYLSENG+T IE L + KL+ LD+AYN IS I
Sbjct: 187 TNLTILSIQGNRLTKINGLASLVNLEQLYLSENGITEIEGLETLSKLQILDLAYNFISQI 246
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV--------AQDPNYRR 302
QN+++L L+EFW NDN++SDW + L K+L+T+Y++RNP+ D NYRR
Sbjct: 247 QNMSNLVNLEEFWCNDNKISDWEQLGKLSVLKKLRTLYMERNPIYFLSTDRTKHDSNYRR 306
Query: 303 KIKLVCPWIVQIDATLA 319
KI L P + Q+DA L
Sbjct: 307 KILLSLPNLQQLDANLT 323
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
Query: 125 ANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTN-LEELYLGKNKISR 183
A+ E++YL +I I +D +++L L +N ++ +EN + ++ LE+L + N+I++
Sbjct: 32 ADDEEIYLEHCRIKCISRLDRFPNVRLLCLRNNLLKKLENFEPISQTLEDLDVYDNQITK 91
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I+NL L KL L L NR++ IENLE L+NL +LY N ++ IENL + + LE L++
Sbjct: 92 IENLECLIKLTNLDLSFNRIKRIENLENLSNLRKLYFVNNHISKIENLSNLKDLEMLELG 151
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVS 270
NKI ++N+ L +L + + N++
Sbjct: 152 SNKIRKLENLDELEKLTQLYCGKNKIP 178
>gi|313232818|emb|CBY09501.1| unnamed protein product [Oikopleura dioica]
Length = 347
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 128/257 (49%), Positives = 186/257 (72%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L LR NL++++EN+ MLTTL EL+LYDN L IE ++TL+NLEILDLS+N IR+I+
Sbjct: 87 VECLCLRNNLVRRMENLSMLTTLTELDLYDNILKKIEGIETLVNLEILDLSYNNIRKIEN 146
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+++L L KL+L NKISKIEN++ L L ++ELG N+IR IENL+ + L+ELYLGKNK
Sbjct: 147 IENLTKLRKLFLAGNKISKIENIETLTSLTMIELGANRIRKIENLETIKGLQELYLGKNK 206
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++++NL +L+++ LQ R+ I+ L+ LTNLT L+L+ NG+T I+NL N L+T+
Sbjct: 207 IAKMENLDVCPELSLVDLQNCRILEIDGLDQLTNLTSLHLAHNGITEIKNLEKNLDLDTI 266
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D++ N I + + L L++ W+ND ++ DW V L QL+T+YL+RNP+ +D Y
Sbjct: 267 DLSGNPIKSLAGLDGLDHLEDLWMNDCKIEDWKEVEKLTARPQLRTVYLERNPIYKDKMY 326
Query: 301 RRKIKLVCPWIVQIDAT 317
R+KI L CP + QIDAT
Sbjct: 327 RKKIILTCPQLTQIDAT 343
>gi|358337818|dbj|GAA56143.1| protein phosphatase 1 regulatory subunit 7 [Clonorchis sinensis]
Length = 356
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 151/303 (49%), Positives = 202/303 (66%), Gaps = 12/303 (3%)
Query: 29 HGNQMSLDNPDEESEAETTESKAED---EESKEVCIERLLLRWNLIKKIENIHMLTT-LK 84
H N+ + E E E + +ED E + ++RL LR NL+KK+EN + + L
Sbjct: 50 HPNERKKLDAYEIDELEIPDCDSEDIDLEHCRIKSVKRLCLRNNLLKKLENFDPVASNLT 109
Query: 85 ELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVD 144
EL++YDNQ+T IENLD L L LDLSFNRI+ I L L NL+KL+L +N+I KIEN+D
Sbjct: 110 ELDVYDNQITTIENLDCLSLLISLDLSFNRIKHITNLSSLINLKKLFLVNNRIGKIENLD 169
Query: 145 HLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR 204
L +L +LELG NKIR +EN+D L +L +LYLGKNKI+ I+NL SL L +LS+Q NR+
Sbjct: 170 GLIQLDMLELGSNKIRKLENVDHLVSLTQLYLGKNKITAIENLDSLVNLTLLSIQGNRIT 229
Query: 205 TIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWI 264
I L+ L NL QLYLSENG+ IE L + KL+ LD+A N IS I+NI HL +L+EFW
Sbjct: 230 KICGLDRLVNLEQLYLSENGIQQIEGLDNLRKLQILDLACNFISQIENIGHLDQLEEFWF 289
Query: 265 NDNQVSDWNTVNVLENNKQLQTIYLDRNPV--------AQDPNYRRKIKLVCPWIVQIDA 316
NDN+VS W+ ++ L + L+T+Y++RNP+ QDPNYRRKI L P + Q+DA
Sbjct: 290 NDNKVSGWDQIDKLTVLRNLRTLYMERNPIYFTTADRSKQDPNYRRKIMLTLPNLRQLDA 349
Query: 317 TLA 319
L
Sbjct: 350 NLT 352
>gi|313245892|emb|CBY34875.1| unnamed protein product [Oikopleura dioica]
Length = 347
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/257 (49%), Positives = 186/257 (72%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L LR NL++++EN+ MLTTL EL+LYDN L IE ++TL+NLEILDLS+N IR+I+
Sbjct: 87 VECLCLRNNLVRRMENLSMLTTLTELDLYDNILKKIEGIETLVNLEILDLSYNNIRKIEN 146
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+++L L KL+L NKISKIEN++ L L ++ELG N+IR IENL+ + L+ELYLGKNK
Sbjct: 147 IENLTKLRKLFLAGNKISKIENIETLTSLTMIELGANRIRKIENLETIKGLQELYLGKNK 206
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++++NL +L+++ LQ R+ I+ L+ L+NLT L+L+ NG+T I+NL N L+T+
Sbjct: 207 IAKMENLDVCPELSLVDLQNCRILEIDGLDQLSNLTSLHLAHNGITEIKNLEKNLDLDTI 266
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D++ N I + + L L++ W+ND ++ DW V L QL+T+YL+RNP+ +D Y
Sbjct: 267 DLSGNPIKSLAGLDGLDHLEDLWMNDCKIEDWKEVEKLTARPQLRTVYLERNPIYKDKMY 326
Query: 301 RRKIKLVCPWIVQIDAT 317
R+KI L CP + QIDAT
Sbjct: 327 RKKIILTCPQLTQIDAT 343
>gi|340378729|ref|XP_003387880.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like
[Amphimedon queenslandica]
Length = 324
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/258 (52%), Positives = 181/258 (70%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLI + I L TL EL++YDN+L I NLD L NL LDLSFN IR I+G
Sbjct: 65 VQVLCLRQNLISDLSMISDLVTLTELDVYDNELKEIANLDKLTNLTFLDLSFNHIRLIEG 124
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ L NL LYL +NK++ ++ + L L +LELG N++R+I+ L+ L NLE+L+LGKNK
Sbjct: 125 ISTLTNLTDLYLINNKLTLMDGLQTLTNLTLLELGSNRLRVIQGLECLVNLEKLFLGKNK 184
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL LTKL LSLQ NR++ IE LE+L NL +LYLSEN ++ I L + KL L
Sbjct: 185 ITKIENLQCLTKLRQLSLQGNRIKVIEGLESLCNLEELYLSENNISEITGLENQAKLTIL 244
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A+NKI + NI+HLT L++ W N NQVSDW VN + K L T+Y + NP+A+DP Y
Sbjct: 245 DLAHNKIGRLSNISHLTVLEDLWFNANQVSDWKEVNNISPLKVLSTVYFEHNPIAKDPQY 304
Query: 301 RRKIKLVCPWIVQIDATL 318
RRK+KL P + QIDAT+
Sbjct: 305 RRKLKLTVPSLTQIDATM 322
>gi|343428158|emb|CBQ71688.1| probable SDS22-protein phosphatase 1, regulatory subunit 7
[Sporisorium reilianum SRZ2]
Length = 414
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/268 (47%), Positives = 177/268 (66%), Gaps = 9/268 (3%)
Query: 60 CIERLLLRWNLIKKI--ENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIRE 117
++RL LR NL+ KI ++I MLT L++L+LYDN + + LD L LE LDLSFN I
Sbjct: 145 SLKRLCLRQNLLTKIRAKDIGMLTQLEDLDLYDNSIDKVSGLDDLTKLESLDLSFNNIHH 204
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDH----LKKLKVLELGDNKIRIIENLDGLTNLEE 173
I G+ HL + ++ NKIS++ D + L+ LELG N++R IEN+ LTNL +
Sbjct: 205 ISGVSHLGECKSIFFVQNKISRVRPSDLQGPIAQSLESLELGGNRLRSIENIGHLTNLTQ 264
Query: 174 LYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLS 233
L+LGKNKI+ + LASLT L +LS+Q NR+ + L+AL NL +LY+S NGLT +E L
Sbjct: 265 LWLGKNKITSLAGLASLTNLRVLSIQSNRITQLTGLDALVNLEELYISHNGLTKLEGLTH 324
Query: 234 NEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRN 292
N KL TLDV N I ++N+AHL L+EFW NDN+++D N ++ L K L+T+YL+ N
Sbjct: 325 NTKLTTLDVGANMIEKVENVAHLVNLEEFWANDNRIADLNGLDRELGGCKALETVYLEGN 384
Query: 293 PV--AQDPNYRRKIKLVCPWIVQIDATL 318
P + P YRRK+KL+ P + QIDAT
Sbjct: 385 PAQRKEGPAYRRKVKLLLPQLRQIDATF 412
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V +E L + N + K+E + T L L++ N + +EN+ L+NLE + NRI ++
Sbjct: 304 VNLEELYISHNGLTKLEGLTHNTKLTTLDVGANMIEKVENVAHLVNLEEFWANDNRIADL 363
Query: 119 KGLDH----LANLEKLYLCSNKISKIENVDHLKKLKVL 152
GLD LE +YL N + E + +K+K+L
Sbjct: 364 NGLDRELGGCKALETVYLEGNPAQRKEGPAYRRKVKLL 401
>gi|426199366|gb|EKV49291.1| hypothetical protein AGABI2DRAFT_116346 [Agaricus bisporus var.
bisporus H97]
Length = 389
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 137/299 (45%), Positives = 195/299 (65%), Gaps = 12/299 (4%)
Query: 31 NQMSLDNPDEESEAETTESKAEDEESKEVC-----IERLLLRWNLIKKIEN--IHMLTTL 83
N +D PDE E E S+ + + + +++L LR NLI ++ H LT L
Sbjct: 86 NDFLVDFPDETPELELLHSRIKSLANLHLPRFAAYLKKLCLRQNLISYLDPDIFHQLTLL 145
Query: 84 KELELYDNQLTVIE-NLDTLINLEILDLSFNRIREIK-GLDHLANLEKLYLCSNKISKIE 141
+EL+LYDN++ I+ +LD L +L++LDLSFN +R + GL+HL +LE +Y NKISKI
Sbjct: 146 EELDLYDNKIRHIDASLDRLQDLKVLDLSFNLLRGVPDGLEHLRSLETIYFVQNKISKIT 205
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++H L+ LELG N+IR IE L+ L NLEEL+LGKNKI++++ L +L KL +LS+Q N
Sbjct: 206 GLNHSTTLRSLELGGNRIRKIEGLEALVNLEELWLGKNKITKLEGLGNLKKLKVLSIQSN 265
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
R+ +ENLEAL+ L Q Y+S NG+ +E L N KL TLDV N IS ++NIAHLT L+E
Sbjct: 266 RITKLENLEALSVLDQFYISHNGIERLEGLDHNNKLTTLDVGSNFISTVENIAHLTNLEE 325
Query: 262 FWINDNQVSDWNTVNV-LENNKQLQTIYLDRNP--VAQDPNYRRKIKLVCPWIVQIDAT 317
W++ N+V D +V L + + LQT+YL+ NP + YRRK+ L P + Q+DAT
Sbjct: 326 LWMSGNKVPDLRSVEAQLRHLQSLQTLYLEGNPCQTSDAVGYRRKVILALPQLTQLDAT 384
>gi|409078375|gb|EKM78738.1| hypothetical protein AGABI1DRAFT_75193 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 389
Score = 233 bits (594), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 136/299 (45%), Positives = 195/299 (65%), Gaps = 12/299 (4%)
Query: 31 NQMSLDNPDEESEAETTESKAEDEESKEVC-----IERLLLRWNLIKKIEN--IHMLTTL 83
N +D PD+ E E S+ + + + +++L LR NLI ++ H LT L
Sbjct: 86 NDFLVDFPDDTPELELLHSRIKSLANLHLPRFAAYLKKLCLRQNLISYLDPDIFHQLTLL 145
Query: 84 KELELYDNQLTVIE-NLDTLINLEILDLSFNRIREIK-GLDHLANLEKLYLCSNKISKIE 141
+EL+LYDN++ I+ +LD L +L++LDLSFN +R + GL+HL +LE +Y NKISKI
Sbjct: 146 EELDLYDNKIRHIDASLDRLQDLKVLDLSFNLLRGVPDGLEHLRSLETIYFVQNKISKIT 205
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++H L+ LELG N+IR IE L+ L NLEEL+LGKNKI++++ L +L KL +LS+Q N
Sbjct: 206 GLNHSTTLRSLELGGNRIRKIEGLEALVNLEELWLGKNKITKLEGLGNLKKLKVLSIQSN 265
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
R+ +ENLEAL+ L Q Y+S NG+ +E L N KL TLDV N IS ++NIAHLT L+E
Sbjct: 266 RITKLENLEALSALDQFYISHNGIERLEGLDHNNKLTTLDVGSNFISTVENIAHLTNLEE 325
Query: 262 FWINDNQVSDWNTVNV-LENNKQLQTIYLDRNP--VAQDPNYRRKIKLVCPWIVQIDAT 317
W++ N+V D +V L + + LQT+YL+ NP + YRRK+ L P + Q+DAT
Sbjct: 326 LWMSGNKVPDLRSVEAQLRHLQSLQTLYLEGNPCQTSDAVGYRRKVILALPQLTQLDAT 384
>gi|348677748|gb|EGZ17565.1| hypothetical protein PHYSODRAFT_502348 [Phytophthora sojae]
Length = 342
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/309 (43%), Positives = 193/309 (62%), Gaps = 23/309 (7%)
Query: 10 DEVDNDNLVTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIERLLLRWN 69
D +++D L + V+ TH LD D K ++RL +R N
Sbjct: 46 DAIEDDELYYVGTAGVKVTH-----LDAID-----------------KLAGLQRLHVRSN 83
Query: 70 LIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEK 129
L++ + ++ LT L+ LELYDNQ+ IE L +L L++LDLSFN IR I L HL LE+
Sbjct: 84 LLRSMASVATLTRLEHLELYDNQIQAIEGLTSLTGLKVLDLSFNEIRVIPDLSHLTQLEE 143
Query: 130 LYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLAS 189
LY+ +NK+ KI ++ LK LK L+LG N++R IE L+GLT LE+L+LGKNKI+ I L
Sbjct: 144 LYVANNKLKKISGIESLKTLKKLDLGANRLRTIEGLEGLTELEQLWLGKNKITAIQGLEK 203
Query: 190 LTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISI 249
L KL I+S+Q NR+ I+ L+ L +LYLS NG+ IEN+ L T+D+A N+IS
Sbjct: 204 LAKLKIISVQSNRVTVIKGLDNNLALEELYLSHNGIEKIENVEHLTNLTTMDLAGNRISA 263
Query: 250 IQ-NIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVC 308
I +A LT+L++FW+NDN V+ + V L L+T+YL+RNP+AQD YR+K++ +
Sbjct: 264 IPTGLAPLTQLEDFWLNDNHVAHYADVEHLVPLAGLRTLYLERNPIAQDFEYRKKLEELL 323
Query: 309 PWIVQIDAT 317
P + QIDAT
Sbjct: 324 PELDQIDAT 332
>gi|393911023|gb|EJD76127.1| leucine-rich protein [Loa loa]
Length = 345
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/297 (44%), Positives = 195/297 (65%), Gaps = 7/297 (2%)
Query: 29 HGNQMSLDNPDEESEAE---TTESKAEDEESKEVCIERLLLRWNLIKKIENIHM-LTTLK 84
H N L+ D ESE A + S+ ++ L +R NL+ + N+H+ + +L
Sbjct: 49 HRNLFDLNEFDVESETVDLCQCRVDAIPDLSRFAHLKELCMRQNLLVSL-NVHLAIVSLT 107
Query: 85 ELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVD 144
+L+LYDNQ+ VI NLD+L+NLEILDLS+NRIR+I+GL L NL+++YL NKI KI+ ++
Sbjct: 108 QLDLYDNQIEVISNLDSLVNLEILDLSYNRIRKIEGLSALCNLKRIYLVHNKIEKIDGLE 167
Query: 145 HLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR 204
L KL+VLELGDN+I+ +EN+ L L ELY+GKNKI + +NL +L KL +LS NRL
Sbjct: 168 SLTKLEVLELGDNRIKKLENIGHLQYLRELYIGKNKIQKFENLENLVKLTVLSAPANRLT 227
Query: 205 TIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWI 264
+ + LT LT+L++S+ G+ ++ L +KL +D A NKI+ + + HL L++ W+
Sbjct: 228 ELSGISMLTELTELHISDQGIESLMELTPQKKLTIIDAANNKITKLDGLIHLDYLEDIWL 287
Query: 265 NDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ--DPNYRRKIKLVCPWIVQIDATLA 319
NDN++SDWN + L L+TIYL+RNP+ + +YRRKI L P + QIDAT
Sbjct: 288 NDNEISDWNELLKLSKLSALRTIYLERNPIYKVDQSSYRRKIMLCLPQVTQIDATFC 344
>gi|312066102|ref|XP_003136110.1| leucine Rich Repeat family protein [Loa loa]
Length = 327
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/297 (44%), Positives = 195/297 (65%), Gaps = 7/297 (2%)
Query: 29 HGNQMSLDNPDEESEAE---TTESKAEDEESKEVCIERLLLRWNLIKKIENIHM-LTTLK 84
H N L+ D ESE A + S+ ++ L +R NL+ + N+H+ + +L
Sbjct: 31 HRNLFDLNEFDVESETVDLCQCRVDAIPDLSRFAHLKELCMRQNLLVSL-NVHLAIVSLT 89
Query: 85 ELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVD 144
+L+LYDNQ+ VI NLD+L+NLEILDLS+NRIR+I+GL L NL+++YL NKI KI+ ++
Sbjct: 90 QLDLYDNQIEVISNLDSLVNLEILDLSYNRIRKIEGLSALCNLKRIYLVHNKIEKIDGLE 149
Query: 145 HLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR 204
L KL+VLELGDN+I+ +EN+ L L ELY+GKNKI + +NL +L KL +LS NRL
Sbjct: 150 SLTKLEVLELGDNRIKKLENIGHLQYLRELYIGKNKIQKFENLENLVKLTVLSAPANRLT 209
Query: 205 TIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWI 264
+ + LT LT+L++S+ G+ ++ L +KL +D A NKI+ + + HL L++ W+
Sbjct: 210 ELSGISMLTELTELHISDQGIESLMELTPQKKLTIIDAANNKITKLDGLIHLDYLEDIWL 269
Query: 265 NDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ--DPNYRRKIKLVCPWIVQIDATLA 319
NDN++SDWN + L L+TIYL+RNP+ + +YRRKI L P + QIDAT
Sbjct: 270 NDNEISDWNELLKLSKLSALRTIYLERNPIYKVDQSSYRRKIMLCLPQVTQIDATFC 326
>gi|390594333|gb|EIN03745.1| L domain-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 352
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/268 (49%), Positives = 188/268 (70%), Gaps = 8/268 (2%)
Query: 60 CIERLLLRWNLIKKIEN--IHMLTTLKELELYDNQLTVIEN-LDTLINLEILDLSFNRIR 116
++RL LR N I K++ +LT L+EL+LYDNQ+ + N LD L +L +LDLSFN +R
Sbjct: 82 SLKRLCLRQNFINKLDPDVFSVLTKLEELDLYDNQIKTLGNALDNLSDLSVLDLSFNNLR 141
Query: 117 EI-KGLDHLANLEKLYLCSNKISKIENVDHLKK-LKVLELGDNKIRIIENLDGLTNLEEL 174
I +GL +L L +Y N+I+KIE ++ L L+ LELG N+IR IE LD L+NLEEL
Sbjct: 142 AIPEGLKNLRTLHTVYFVQNRITKIEGLEALGANLRSLELGGNRIRKIEGLDALSNLEEL 201
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LGKNKI++++ LASL KL ILS+Q NR+ IENLE L +L QLYLS NG+ ++E L +N
Sbjct: 202 WLGKNKITKLEGLASLKKLKILSIQSNRITKIENLENLPDLEQLYLSHNGIQSLEGLEAN 261
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNP 293
KL+TLDV+ N ++ ++ ++HL +L+E W+N+N++ D + + L + L+TIYL+ NP
Sbjct: 262 SKLQTLDVSNNFVAELKGLSHLHQLEELWMNNNKIPDLRALESELRHISTLETIYLEGNP 321
Query: 294 V--AQDPNYRRKIKLVCPWIVQIDATLA 319
A+ NYRRKI L P + QIDAT+A
Sbjct: 322 CQRAEGANYRRKIMLALPQVTQIDATMA 349
>gi|449681460|ref|XP_002153798.2| PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Hydra
magnipapillata]
Length = 316
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 139/261 (53%), Positives = 192/261 (73%), Gaps = 2/261 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I+ L LR NLIK + + +LTTL+ L+LYDN LT I++++TL NL LD+SFN++++I+
Sbjct: 55 IKSLCLRENLIKDWDGLSLLTTLESLDLYDNLLTNIKSIETLTNLNYLDVSFNKVKKIEN 114
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L NLEKL+L NK+SKIEN++ L KL +LELG N+IR I+ ++ L NL+ELYLG+NK
Sbjct: 115 IDLLVNLEKLFLIRNKLSKIENLNSLTKLTLLELGSNRIRHIQGIECLVNLQELYLGQNK 174
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS+++NL +L KL ILS+Q NR+ IE LE L +L + Y+S NG+ IENL N+KL+TL
Sbjct: 175 ISKLENLTTLKKLKILSIQSNRILKIEGLEELEDLEEFYISFNGIEKIENLHCNKKLKTL 234
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA--QDP 298
DV NKIS+I+ + +L EL+EFW NDN VSDW ++L L+T+YL+RNP+
Sbjct: 235 DVGNNKISLIEGLDNLNELKEFWCNDNNVSDWKCTDILARLPYLETVYLERNPLQLNDQS 294
Query: 299 NYRRKIKLVCPWIVQIDATLA 319
YRRKIKL P + Q+DATL
Sbjct: 295 GYRRKIKLALPKLKQLDATLT 315
>gi|308480619|ref|XP_003102516.1| hypothetical protein CRE_04054 [Caenorhabditis remanei]
gi|308261248|gb|EFP05201.1| hypothetical protein CRE_04054 [Caenorhabditis remanei]
Length = 347
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 122/257 (47%), Positives = 168/257 (65%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E+ LRWNLIKKIEN+ LTTL LE YDNQ+ +ENLD L+NLE+LDLSFNRI +I+
Sbjct: 56 VEQFYLRWNLIKKIENLDCLTTLTHLEFYDNQIAKVENLDALVNLEVLDLSFNRIMKIEN 115
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L L+ LY NKI+KIE +D L +L+ LELGDN+I IENLD L+ L+LG N+
Sbjct: 116 LEKLTKLKTLYFVHNKITKIEGLDMLTELEYLELGDNRITKIENLDNNLKLDRLFLGANQ 175
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I I+NL L L +LSL N + ++N+ LT L ++YL++NG+ L N LE L
Sbjct: 176 IRNIENLEHLKNLTVLSLPANAITVVDNVAGLTKLKEIYLAQNGIKYFFGLDENLPLEIL 235
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+ N++ ++NI L+ L +FW N++SDWN ++ L QL +YLD NP+A Y
Sbjct: 236 DLNQNRLEKVENIHQLSTLTDFWARGNKLSDWNILDELIRLPQLSCVYLDNNPIADSDTY 295
Query: 301 RRKIKLVCPWIVQIDAT 317
R K+ P I ++D T
Sbjct: 296 RGKVVRFLPQIHRLDGT 312
>gi|328770697|gb|EGF80738.1| hypothetical protein BATDEDRAFT_88063 [Batrachochytrium
dendrobatidis JAM81]
Length = 356
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 123/260 (47%), Positives = 183/260 (70%), Gaps = 3/260 (1%)
Query: 63 RLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLD 122
RL +R NLI KIE++ + L+E++ YDN+++ + NLD L +L++LDLSFN++R+I+G++
Sbjct: 96 RLSVRQNLIHKIEHLDDVAQLEEIDFYDNRISTVCNLDGLTHLKVLDLSFNKVRKIQGIE 155
Query: 123 HLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKIS 182
L +L LY +NKI+ IEN+ HL L LELG N+IR +ENL L NLE+L++GKNKIS
Sbjct: 156 SLIHLHDLYFVANKITVIENLGHLVNLTNLELGANRIRKLENLSLLVNLEQLWIGKNKIS 215
Query: 183 RIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDV 242
+I+ L +L KL ++S+Q NRL I+ LE L NL +LYLS N + I+ L N KL TLDV
Sbjct: 216 KIEGLENLKKLRLISIQSNRLTQIQGLETLANLEELYLSHNAIERIQGLEGNLKLSTLDV 275
Query: 243 AYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVAQDPN-- 299
+ N+I+ ++ + HLTEL+E W ++NQ++ + V L+N +L T+Y + NP+ D
Sbjct: 276 SNNRITQLEGLDHLTELEELWASNNQLNQFRQVEQQLQNKTKLTTVYFEGNPLETDARAV 335
Query: 300 YRRKIKLVCPWIVQIDATLA 319
YRRKI+++ P + QIDA L
Sbjct: 336 YRRKIRVLLPQLKQIDAVLV 355
>gi|324518902|gb|ADY47233.1| Protein phosphatase 1 regulatory subunit 7 [Ascaris suum]
Length = 325
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 126/257 (49%), Positives = 167/257 (64%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
IE L LRWNLIK+IEN+H L TL EL+LYDNQ+T +ENLD L+NLE LDLSFNRI I
Sbjct: 59 SIESLCLRWNLIKRIENLHNLVTLTELDLYDNQITKVENLDALVNLETLDLSFNRIAVID 118
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
GL L L+ L+ NKI KIE + L +L LELGDN+I+ IENL ++ L+LG N
Sbjct: 119 GLSSLKKLKMLFFVHNKIEKIEGLSELTELTYLELGDNRIKKIENLSTNKKIQRLFLGAN 178
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
+I I+NL L L +LSL N ++TI+ L+ L NL +LYLS+NG+ I+ L NEKLE
Sbjct: 179 QIQEIENLDDLENLEVLSLPANAIQTIKGLDKLLNLRELYLSQNGVKEIQGLEHNEKLEI 238
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPN 299
LD+ YN + I + HL L +FW NQ+ + VN L + +L +YL+ NP +
Sbjct: 239 LDLNYNLLKRISGVRHLNNLTDFWAKSNQLYEMEDVNELADLPRLTLVYLEMNPFSDSST 298
Query: 300 YRRKIKLVCPWIVQIDA 316
YR K+ + P I ++DA
Sbjct: 299 YRSKVIRMLPQIKKLDA 315
>gi|268532628|ref|XP_002631442.1| Hypothetical protein CBG03304 [Caenorhabditis briggsae]
Length = 327
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/262 (50%), Positives = 178/262 (67%), Gaps = 3/262 (1%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
IE L +R NL+ + L++L L+LY+NQLT I NLD+L+NL LDLS+NRIR+I
Sbjct: 60 IEELRMRNNLLTLCSPTLAALSSLTSLDLYENQLTEISNLDSLVNLVSLDLSYNRIRQIS 119
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
GLD L LE LYL +NKI KIEN+D L +L++LELGDN+I+ IEN+ L NLE+L+LGKN
Sbjct: 120 GLDKLTKLEILYLVNNKIEKIENLDSLTQLQLLELGDNRIKTIENISHLVNLEQLFLGKN 179
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI +I+ + +L KL +LS+ NRL IEN+E+L +L +LYLS+ GL I + + L
Sbjct: 180 KIRQIEGVETLQKLRVLSIPGNRLVKIENIESLIDLKELYLSDQGLQDIHGVENLSNLTL 239
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV-AQDP 298
LDVA N+I + L L +FW NDN+V ++ V++L K LQT+YL+RNP D
Sbjct: 240 LDVANNEIKTFSGVEKLEALNDFWANDNKVESFSEVDLLSKLKDLQTVYLERNPFYFHDT 299
Query: 299 N-YRRKIKLVCPWIVQIDATLA 319
N YRRK+ L I Q+DAT+
Sbjct: 300 NQYRRKVMLTLTQITQLDATMC 321
>gi|308480647|ref|XP_003102530.1| hypothetical protein CRE_04063 [Caenorhabditis remanei]
gi|308261262|gb|EFP05215.1| hypothetical protein CRE_04063 [Caenorhabditis remanei]
Length = 344
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/261 (50%), Positives = 176/261 (67%), Gaps = 3/261 (1%)
Query: 62 ERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L +R NL+ + L TL L+LY+NQLT I NL++L+NL LDLS+NRIREI G
Sbjct: 77 QELRMRNNLLTSCSPTLSSLVTLTSLDLYENQLTEISNLESLVNLVSLDLSYNRIREISG 136
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L LE LYL +NKI KIEN+ L +LK+LELGDN+I+ IEN++ L NLEEL+LGKNK
Sbjct: 137 LDKLTKLEILYLVNNKIEKIENLGSLTQLKLLELGDNRIKKIENIEHLVNLEELFLGKNK 196
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I +I+ + SL KL +LS+ NRL IEN+E L +L +LYLS+ GL I + S L L
Sbjct: 197 IRQIEGVGSLQKLRVLSIPGNRLVKIENVEELKDLKELYLSDQGLQNIYGVESLVNLTLL 256
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV-AQDPN 299
DVA N+I+ + LT L +FW NDN+V ++ + +L K LQT+YL+RNP D N
Sbjct: 257 DVANNEINSFSGVEKLTSLNDFWANDNKVESFSEIELLSKLKDLQTVYLERNPFYFHDTN 316
Query: 300 -YRRKIKLVCPWIVQIDATLA 319
YRRK+ + + QIDAT+
Sbjct: 317 QYRRKVMMTLTQVTQIDATMC 337
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 96/168 (57%), Gaps = 3/168 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L L N I+KIEN+ LT LK LEL DN++ IEN++ L+NLE L L N+IR+I+G
Sbjct: 143 LEILYLVNNKIEKIENLGSLTQLKLLELGDNRIKKIENIEHLVNLEELFLGKNKIRQIEG 202
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ L L L + N++ KIENV+ LK LK L L D ++ I ++ L NL L + N+
Sbjct: 203 VGSLQKLRVLSIPGNRLVKIENVEELKDLKELYLSDQGLQNIYGVESLVNLTLLDVANNE 262
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL---YLSENGL 225
I+ + LT LN N++ + +E L+ L L YL N
Sbjct: 263 INSFSGVEKLTSLNDFWANDNKVESFSEIELLSKLKDLQTVYLERNPF 310
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 3/126 (2%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V +E L L N I++IE + L L+ L + N+L IEN++ L +L+ L LS ++ I
Sbjct: 185 VNLEELFLGKNKIRQIEGVGSLQKLRVLSIPGNRLVKIENVEELKDLKELYLSDQGLQNI 244
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRI---IENLDGLTNLEELY 175
G++ L NL L + +N+I+ V+ L L DNK+ IE L L +L+ +Y
Sbjct: 245 YGVESLVNLTLLDVANNEINSFSGVEKLTSLNDFWANDNKVESFSEIELLSKLKDLQTVY 304
Query: 176 LGKNKI 181
L +N
Sbjct: 305 LERNPF 310
>gi|67516287|ref|XP_658029.1| hypothetical protein AN0425.2 [Aspergillus nidulans FGSC A4]
gi|40747368|gb|EAA66524.1| hypothetical protein AN0425.2 [Aspergillus nidulans FGSC A4]
Length = 910
Score = 228 bits (581), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 134/296 (45%), Positives = 197/296 (66%), Gaps = 8/296 (2%)
Query: 31 NQMSLDNPD-EESEAETTESKAEDE---ESKEVCIERLLLRWNLIKKIENIHMLT-TLKE 85
N +L++PD +S+A E DE E ++ +ERL LR N I +IE L TL+E
Sbjct: 611 NPEALEDPDYSDSDAPPVEEIEADEDLLEDEDKDVERLCLRQNQISRIELPSSLGETLQE 670
Query: 86 LELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDH 145
L+LYDN ++ ++ LD NL LDLSFN+++ IK + HL L+ LY NKISKIE ++
Sbjct: 671 LDLYDNLISHLKGLDDFHNLTSLDLSFNKLKHIKNISHLVKLKDLYFVQNKISKIEGLEG 730
Query: 146 LKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRT 205
L ++K LELG NKIR IENL+ L+ LEEL+LGKNKI+ + NL +LT L ILS+Q NRL +
Sbjct: 731 LTEIKNLELGANKIREIENLETLSALEELWLGKNKITEMKNLDALTNLRILSIQSNRLTS 790
Query: 206 IENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWIN 265
++ L +L NL +LY+S N +T + L SN L LD + N++S +++++HL EL+E W +
Sbjct: 791 LKGLSSLKNLEELYVSHNAITDLAGLESNNALRVLDFSNNQVSKLEHLSHLKELEELWAS 850
Query: 266 DNQVSDWNTVNV-LENNKQLQTIYLDRNPVAQDPN--YRRKIKLVCPWIVQIDATL 318
+NQ+S +N V L++ + L+T+Y + NP+ + YR K++L P I+QIDAT
Sbjct: 851 NNQLSSFNEVERELKDKENLKTVYFEGNPLQTNGPVVYRNKVRLAIPQIMQIDATF 906
>gi|393242207|gb|EJD49726.1| L domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 450
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 131/268 (48%), Positives = 175/268 (65%), Gaps = 13/268 (4%)
Query: 61 IERLLLRWNLIKKI--ENIHMLTTLKELELYDNQLTVIENLDTLIN---LEILDLSFNRI 115
++RL LR N I ++ E+ L+ L+EL+LYDNQL I D L+N LE LDLSFN +
Sbjct: 181 LKRLCLRQNHISELDPEDWDALSELEELDLYDNQLKSIG--DALVNATKLESLDLSFNLL 238
Query: 116 REIK-GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
R + GL L LY NKI++I++V H LK LELG N+IR IENLDGL LEEL
Sbjct: 239 RAVPPGLTAQTGLTALYFVQNKIARIDHVSHFAALKTLELGGNRIRKIENLDGLDALEEL 298
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LGKNKI++++NL L +L ILS+Q NR+ +E LE LT L + Y+S NGL +E L N
Sbjct: 299 WLGKNKIAKLENLDKLPRLRILSIQSNRITKLEGLEHLTALEEFYISHNGLERLEGLEHN 358
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV---LENNKQLQTIYLDR 291
KL TLDVA N+I+ ++NIAHL EL+E W N+N++ D +T++ + +LQTIY +
Sbjct: 359 LKLRTLDVAANRIAALENIAHLRELEELWANNNRIPDLSTLDAQCGPAHMPELQTIYFEG 418
Query: 292 NPVAQD--PNYRRKIKLVCPWIVQIDAT 317
NP YRRK+ L P + QIDAT
Sbjct: 419 NPAQTSDMAGYRRKVILALPQVKQIDAT 446
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 90/159 (56%), Gaps = 6/159 (3%)
Query: 53 DEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSF 112
D S ++ L L N I+KIEN+ L L+EL L N++ +ENLD L L IL +
Sbjct: 265 DHVSHFAALKTLELGGNRIRKIENLDGLDALEELWLGKNKIAKLENLDKLPRLRILSIQS 324
Query: 113 NRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLE 172
NRI +++GL+HL LE+ Y+ N + ++E ++H KL+ L++ N+I +EN+ L LE
Sbjct: 325 NRITKLEGLEHLTALEEFYISHNGLERLEGLEHNLKLRTLDVAANRIAALENIAHLRELE 384
Query: 173 ELYLGKNKISRIDNL------ASLTKLNILSLQCNRLRT 205
EL+ N+I + L A + +L + + N +T
Sbjct: 385 ELWANNNRIPDLSTLDAQCGPAHMPELQTIYFEGNPAQT 423
>gi|194211518|ref|XP_001497675.2| PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Equus
caballus]
Length = 378
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 159/205 (77%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 169 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 228
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIEN+ +L++L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 229 IDKLTRLKKLFLVNNKINKIENISNLRQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 288
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 289 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTML 348
Query: 241 DVAYNKISIIQNIAHLTELQEFWIN 265
DVA N+I I+NI+HLTELQEFW+
Sbjct: 349 DVASNRIKKIENISHLTELQEFWVG 373
>gi|225712972|gb|ACO12332.1| phosphatase 1 regulatory subunit 7 [Lepeophtheirus salmonis]
Length = 301
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 141/259 (54%), Positives = 188/259 (72%), Gaps = 1/259 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L LRWNLIKKIEN++ LTTL EL+LYDNQ+ VIENLD L+NLE LDLSFNR+R+I+G
Sbjct: 43 VETLCLRWNLIKKIENLNTLTTLTELDLYDNQIPVIENLDPLVNLESLDLSFNRLRKIEG 102
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ +L L KLYL SNKIS IEN++ L+ L++LELGDNKIR IENL+ L +LYLGKNK
Sbjct: 103 ISNLTKLRKLYLISNKISVIENLEALENLELLELGDNKIRKIENLESQKKLRQLYLGKNK 162
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS+++NL L++LS+Q NR+ +ENL+ + + QLY+S+NG+ IE L L L
Sbjct: 163 ISKLENL-DFPLLDLLSIQNNRIVKLENLDMIPRIDQLYISQNGIEVIEGLEGVSNLTIL 221
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A NKI + N+ L L+E W N NQ+SDW V L +K L+ +YL+ NP+ + +Y
Sbjct: 222 DIATNKIETLDNLDVLETLEELWCNTNQISDWKEVEKLNCHKDLKCVYLEHNPIYKSNDY 281
Query: 301 RRKIKLVCPWIVQIDATLA 319
RRK+KL+ P + QIDA L
Sbjct: 282 RRKVKLILPTVTQIDAALC 300
>gi|302416125|ref|XP_003005894.1| protein phosphatase 1 regulatory subunit SDS22 [Verticillium
albo-atrum VaMs.102]
gi|261355310|gb|EEY17738.1| protein phosphatase 1 regulatory subunit SDS22 [Verticillium
albo-atrum VaMs.102]
Length = 378
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/260 (45%), Positives = 175/260 (67%), Gaps = 4/260 (1%)
Query: 63 RLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RL LR N I+ I+ + L TL++L+LYDN ++ I LD L +L LDLSFN+I+ IK +
Sbjct: 116 RLCLRQNSIQSIDGLAALAPTLQDLDLYDNLISHIRGLDELTHLTSLDLSFNKIKHIKNI 175
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
HL L++++ +NKISKIE +D L L LELG N+IR +ENLD L NLEEL++ KNKI
Sbjct: 176 SHLTKLKEVFFVANKISKIEGLDTLTGLTSLELGSNRIRTLENLDALQNLEELWVAKNKI 235
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ +D LA+L KL +LS+Q NR+R + L +T L +LY+S N LT+++ L +N+ L LD
Sbjct: 236 TALDGLAALPKLRLLSIQSNRIRDLSPLADVTGLEELYISHNALTSLDGLAANKALRVLD 295
Query: 242 VAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QDPN 299
++ N ++ +Q +A L L+EFW + NQ++D+N V L + L T+Y + NP+ + P
Sbjct: 296 ISNNAVASVQGLAPLAALEEFWASYNQIADFNEVERELRDKAGLTTVYFEGNPLQLRGPA 355
Query: 300 -YRRKIKLVCPWIVQIDATL 318
YR K++L P + QIDAT
Sbjct: 356 VYRNKVRLALPQLSQIDATF 375
>gi|443899103|dbj|GAC76434.1| protein phosphatase 1, regulatory subunit, and related proteins
[Pseudozyma antarctica T-34]
Length = 429
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/270 (46%), Positives = 174/270 (64%), Gaps = 11/270 (4%)
Query: 60 CIERLLLRWNLIKKI--ENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIRE 117
++RL LR NL+ KI ++I +LT L++L+LYDN + I LD L LE LDLSFN I
Sbjct: 158 SLKRLCLRQNLLTKIRSKDIGVLTELEDLDLYDNSIEKISGLDALTKLESLDLSFNNIHH 217
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDH----LKKLKVLELGDNKIRIIENLDGLTNLEE 173
I + HL + +Y NKIS++ D L+ LELG N++R IEN+ L NL +
Sbjct: 218 ISNVSHLGECKTIYFVQNKISRVRPDDLQGAIAHSLESLELGGNRLRSIENIGHLNNLTQ 277
Query: 174 LYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLS 233
L+LGKNKI+ ++ +++LT L +LS+Q NR+ + LE L NL +LYLS NGLT IE L +
Sbjct: 278 LWLGKNKITSLEGISTLTNLRVLSIQSNRITKLHGLEKLVNLQELYLSHNGLTKIEGLEN 337
Query: 234 NEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN---VLENNKQLQTIYLD 290
N KL TLD+ N I I+N+AHL +L+EFW NDN++ D N V+ N L+T+YL+
Sbjct: 338 NTKLTTLDIGANMIERIENVAHLNQLEEFWANDNRIEDLNDVDRQLGPNNMPNLETVYLE 397
Query: 291 RNPV--AQDPNYRRKIKLVCPWIVQIDATL 318
NP + P YRRK++L+ P I QIDAT
Sbjct: 398 GNPAQKKEGPAYRRKLRLLLPQIKQIDATF 427
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 57 KEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIR 116
K V ++ L L N + KIE + T L L++ N + IEN+ L LE + NRI
Sbjct: 315 KLVNLQELYLSHNGLTKIEGLENNTKLTTLDIGANMIERIENVAHLNQLEEFWANDNRIE 374
Query: 117 EIK------GLDHLANLEKLYLCSNKISKIENVDHLKKLKVL 152
++ G +++ NLE +YL N K E + +KL++L
Sbjct: 375 DLNDVDRQLGPNNMPNLETVYLEGNPAQKKEGPAYRRKLRLL 416
>gi|326427599|gb|EGD73169.1| hypothetical protein PTSG_04882 [Salpingoeca sp. ATCC 50818]
Length = 354
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 123/259 (47%), Positives = 170/259 (65%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N I +I + T L+ELEL DN L IEN++ L L+ LD+S+N IR+IK
Sbjct: 94 LKTLCLRQNHITEISGLENCTQLEELELRDNLLEKIENVNHLTELKALDVSYNGIRKIKH 153
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ L LEKL+L +NKI IE+++HL L +LELG N+IR IE LD L NL +L+LGKNK
Sbjct: 154 ISQLVKLEKLFLANNKIKAIEHLNHLANLTMLELGANRIREIEGLDALVNLRQLFLGKNK 213
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ I L +L L +LSLQ NR+ IE LE L +L +LYLS NG+T IE L +L L
Sbjct: 214 ITHISGLDNLMNLRVLSLQSNRIEKIEGLENLKHLEELYLSHNGITVIEGLDHQLELSVL 273
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
DV+ N+I + ++HLT L EFW N N++S W + L+ + +Y + NP+++D Y
Sbjct: 274 DVSANRIEHLSGVSHLTALDEFWCNTNKLSSWPELEQLKPCAHITCVYFEGNPLSEDTMY 333
Query: 301 RRKIKLVCPWIVQIDATLA 319
R+K+KL P + QIDATL
Sbjct: 334 RKKLKLTLPSLKQIDATLC 352
>gi|384493511|gb|EIE84002.1| hypothetical protein RO3G_08707 [Rhizopus delemar RA 99-880]
Length = 972
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 130/262 (49%), Positives = 174/262 (66%), Gaps = 5/262 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ERL LR N I I+ + L L+EL+LYDN+++ I L+ L L LDLSFN+I+ IK
Sbjct: 708 LERLYLRQNFIIDIDGLENLNNLQELDLYDNKISHIRGLNHLSQLTDLDLSFNKIKHIKN 767
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L L+ LY SNKISKIEN+D LK +ELG N+IR+IENL+GL NL EL+LGKNK
Sbjct: 768 LDKLTQLKNLYFVSNKISKIENLDTFTNLKNIELGANRIRVIENLNGLANLTELWLGKNK 827
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++++NL+ L L +LS+Q NRL IE LE L L ++YLS N +T IE +N KL +
Sbjct: 828 ITKLENLSPLKNLRLLSIQSNRLTKIEGLEELDKLEEIYLSHNAITKIEGFQNNLKLTII 887
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV---LENNKQLQTIYLDRNPVAQ- 296
D+A N ++ I+N++HL L+EFW N+NQ + V L K L+T+YL+ NP+ Q
Sbjct: 888 DIANNALTTIENLSHLPALEEFWANNNQFDNECYQQVEEELGKIKTLETVYLEGNPMQQK 947
Query: 297 -DPNYRRKIKLVCPWIVQIDAT 317
YR KI+L I QIDAT
Sbjct: 948 NKATYRNKIRLALSNIKQIDAT 969
>gi|344299104|ref|XP_003421228.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like
[Loxodonta africana]
Length = 360
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 158/203 (77%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ +ENL+ L LEILD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIENLEALQSLRELDLYDNQIKKMENLEALTGLEILDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIEN+ +L +L++LELG N+IR IEN+D LTNL+ L+LGKNK
Sbjct: 160 IDKLTQLKKLFLVNNKINKIENISNLHQLQMLELGSNRIRAIENIDTLTNLDSLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFW 263
D+A N+I I+N++HLTELQEFW
Sbjct: 280 DLASNRIKKIENVSHLTELQEFW 302
>gi|346973940|gb|EGY17392.1| protein phosphatase 1 regulatory subunit SDS22 [Verticillium
dahliae VdLs.17]
Length = 378
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 118/260 (45%), Positives = 174/260 (66%), Gaps = 4/260 (1%)
Query: 63 RLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RL LR N I+ I+ + L TL++L+LYDN ++ I LD L +L LDLSFN+I+ IK +
Sbjct: 116 RLCLRQNSIQSIDGLAALAPTLQDLDLYDNLISHIRGLDELTHLTSLDLSFNKIKHIKNI 175
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
HL L++++ +NKISKIE +D L L LELG N+IR +ENLD L NLEEL++ KNKI
Sbjct: 176 SHLTKLKEVFFVANKISKIEGLDTLTGLTSLELGSNRIRTLENLDALQNLEELWVAKNKI 235
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ +D LA+L KL +LS+Q NR+R + L + L +LY+S N LT+++ L +N+ L LD
Sbjct: 236 TALDGLAALPKLRLLSIQSNRIRDLSPLADVPGLEELYISHNALTSLDGLAANKALRVLD 295
Query: 242 VAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QDPN 299
++ N ++ +Q +A L L+EFW + NQ++D+N V L + L T+Y + NP+ + P
Sbjct: 296 ISNNAVASVQGLAPLAALEEFWASYNQIADFNEVERELRDKAALTTVYFEGNPLQLRGPA 355
Query: 300 -YRRKIKLVCPWIVQIDATL 318
YR K++L P + QIDAT
Sbjct: 356 VYRNKVRLALPQLSQIDATF 375
>gi|335773403|gb|AEH58382.1| phosphatase 1 regulatory subunit-like protein [Equus caballus]
Length = 275
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 158/203 (77%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 73 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 132
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIEN+ +L++L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 133 IDKLTRLKKLFLVNNKINKIENISNLRQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 192
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 193 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENNNKLTML 252
Query: 241 DVAYNKISIIQNIAHLTELQEFW 263
DVA N+I I+NI+HLTELQEFW
Sbjct: 253 DVASNRIKKIENISHLTELQEFW 275
>gi|74012899|ref|XP_534627.2| PREDICTED: protein phosphatase 1 regulatory subunit 7-like, partial
[Canis lupus familiaris]
Length = 302
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 158/203 (77%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L +LEILD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIENLGELQSLRELDLYDNQIKKIENLEALTHLEILDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LT+LE L+LGKNK
Sbjct: 160 VDKLTRLRKLFLVNNKISKIENISNLHQLQMLELGSNRIRAIENIDTLTSLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+Q NRL +E L++L NL +LYLS NG+ IE L +N KL L
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKMEGLQSLVNLRELYLSHNGIEVIEGLENNNKLTML 279
Query: 241 DVAYNKISIIQNIAHLTELQEFW 263
D+A N+I I+N++HLTELQEFW
Sbjct: 280 DIASNRIKKIENVSHLTELQEFW 302
>gi|17536161|ref|NP_495653.1| Protein T09A5.9 [Caenorhabditis elegans]
gi|1176604|sp|P45969.1|YNZ9_CAEEL RecName: Full=Uncharacterized protein T09A5.9
gi|3879646|emb|CAA85336.1| Protein T09A5.9 [Caenorhabditis elegans]
Length = 326
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/301 (46%), Positives = 192/301 (63%), Gaps = 6/301 (1%)
Query: 23 EAVENTHGNQMSLDNPDEES-EAETTESKAE--DEESKEVCIERLLLRWNLIKKIE-NIH 78
E+ E NQ L D +S E + T ++A+ + + IE L +R NL+ I I
Sbjct: 19 ESKEPVLKNQFDLSTFDIDSPEIDLTHTRADHIPDLTGFPKIEELRMRNNLLVSISPTIS 78
Query: 79 MLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKIS 138
L TL L+LY+NQLT I +L++L+NL LDLS+NRIR+I GLD L LE LYL SNKI
Sbjct: 79 SLVTLTSLDLYENQLTEISHLESLVNLVSLDLSYNRIRQINGLDKLTKLETLYLVSNKIE 138
Query: 139 KIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSL 198
KIEN++ L +LK+LELGDN+I+ IEN+ L NL+EL++GKNKI +++ + +L KL++LSL
Sbjct: 139 KIENLEALTQLKLLELGDNRIKKIENIGHLVNLDELFIGKNKIRQLEGVETLQKLSVLSL 198
Query: 199 QCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
NR+ IEN+E L NL +LYLS+ GL I + L LDVA N+I + L
Sbjct: 199 PGNRIVKIENVEQLNNLKELYLSDQGLQDIHGVEPLTNLLLLDVANNEIKTFSGVERLES 258
Query: 259 LQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV-AQDPN-YRRKIKLVCPWIVQIDA 316
L +FW NDN+V ++ + L K LQT+YL+RNP D N YRRK+ + + QIDA
Sbjct: 259 LNDFWANDNKVESFSEIEQLSKLKGLQTVYLERNPFYFNDTNQYRRKVMMTLTQVTQIDA 318
Query: 317 T 317
T
Sbjct: 319 T 319
>gi|327298427|ref|XP_003233907.1| protein phosphatase PP1 regulatory subunit Sds22 [Trichophyton
rubrum CBS 118892]
gi|326464085|gb|EGD89538.1| protein phosphatase PP1 regulatory subunit Sds22 [Trichophyton
rubrum CBS 118892]
Length = 341
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/263 (49%), Positives = 183/263 (69%), Gaps = 8/263 (3%)
Query: 61 IERLLLRWNLIKKI---ENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIRE 117
IE++ LR N I +I EN + TLKEL+LYDN ++ ++ LD ++NL LDLSFN I+
Sbjct: 77 IEKICLRQNQITRIYLPEN--LAPTLKELDLYDNNISHVKGLDHVVNLTSLDLSFNDIKH 134
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
IK + L +L+ LY N+I IE ++ LK+L+ LELG NKIR I+NLD LT LEEL+LG
Sbjct: 135 IKNISTLVHLKDLYFIQNRIQTIEGLEELKELRNLELGANKIREIDNLDTLTALEELWLG 194
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KNKIS I N++SLT L ILS+ NR+ T+ LE+L+NL +LYLS+N LT I L SN L
Sbjct: 195 KNKISEIKNISSLTNLKILSIPSNRIETLSGLESLSNLEELYLSDNLLTGISGLESNTNL 254
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-- 294
LD++ NK+S ++N++HLT+L+E W ++NQ++ + V L++ ++L T+Y + NP+
Sbjct: 255 RVLDISNNKVSRLENLSHLTKLEELWASNNQLASFEEVERELKDKEELNTVYFEGNPLQK 314
Query: 295 AQDPNYRRKIKLVCPWIVQIDAT 317
A YR K++L P I QIDAT
Sbjct: 315 AAPALYRNKVRLALPQIKQIDAT 337
>gi|339245047|ref|XP_003378449.1| protein phosphatase 1 regulatory subunit 7 [Trichinella spiralis]
gi|316972640|gb|EFV56306.1| protein phosphatase 1 regulatory subunit 7 [Trichinella spiralis]
Length = 314
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/255 (49%), Positives = 175/255 (68%), Gaps = 2/255 (0%)
Query: 67 RWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
R NL+ KIEN+ L TL EL+LY+NQ+ IENL+ L LE LDLSFNRIR+I+ L L
Sbjct: 53 RNNLLTKIENLSCLRNTLVELDLYNNQIPKIENLEELAMLEALDLSFNRIRKIENLAALT 112
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL+ L+L N+I KIEN+D L LK LELGDNKIR +ENL+ L NL L++G NK+++I+
Sbjct: 113 NLKHLFLIHNRIEKIENLDTLVNLKSLELGDNKIRKLENLNSLVNLNYLFVGSNKLTKIE 172
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
NL SL L +LS+QCN ++ IENL+ NL + Y+S+NG++ IE L +L TLDV+ N
Sbjct: 173 NLDSLVNLKLLSIQCNWIKKIENLDNCVNLQEFYISDNGISVIEGLEKCTQLRTLDVSGN 232
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV-AQDPNYRRKI 304
I + ++++LT L+E W N N++ V++L N L+T+Y + N +D NYRRK+
Sbjct: 233 NIKELCDLSYLTNLEELWFNKNKLDSVEKVSILANCPSLRTVYFEENNFDHRDVNYRRKV 292
Query: 305 KLVCPWIVQIDATLA 319
L P + QIDAT+
Sbjct: 293 MLALPQVTQIDATVC 307
>gi|299749748|ref|XP_001836305.2| protein phosphatase regulatory subunit [Coprinopsis cinerea
okayama7#130]
gi|298408582|gb|EAU85489.2| protein phosphatase regulatory subunit [Coprinopsis cinerea
okayama7#130]
Length = 396
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/264 (47%), Positives = 178/264 (67%), Gaps = 7/264 (2%)
Query: 61 IERLLLRWNLIKKI--ENIHMLTTLKELELYDNQLT-VIENLDTLINLEILDLSFNRIRE 117
+ RL LR NL+K + E H LT L+EL+LYDN++ + + LD L +L +LDLSFN +
Sbjct: 129 LRRLCLRQNLVKHLDSETFHQLTKLQELDLYDNRIKNLGDALDKLSDLTMLDLSFNLFKH 188
Query: 118 IKG-LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYL 176
I L+HL+ L +Y N+ISKI ++ L L LELG N+IR IENLD L NLEEL+L
Sbjct: 189 IPDRLEHLSKLTLIYFVQNRISKITGLESLTNLTSLELGGNRIRKIENLDTLVNLEELWL 248
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEK 236
GKNKI++++ L+SL KL ILS+Q NR+ +E +E L +L +LYLS NG+ IENL N
Sbjct: 249 GKNKITKLEGLSSLKKLRILSIQSNRITKLEGVEGLESLEELYLSHNGIKKIENLEKNTN 308
Query: 237 LETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA 295
L TLD+ YN + I+ ++HL +L+E WI+ N++ D++ ++ L K L+T+YL+ NP
Sbjct: 309 LTTLDIGYNFLEAIEGVSHLNKLEELWISGNKIPDFSGLDKELRGIKTLRTLYLEANPCE 368
Query: 296 QDP--NYRRKIKLVCPWIVQIDAT 317
+ +YRRK+ L P + QIDAT
Sbjct: 369 TNDRVHYRRKVMLALPQLTQIDAT 392
>gi|268530796|ref|XP_002630524.1| Hypothetical protein CBG12962 [Caenorhabditis briggsae]
Length = 351
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/257 (46%), Positives = 168/257 (65%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E+ LRWNL+KKIEN+ LTTL LE YDNQ+ +ENLD L+NLEILDLSFNRI +I+
Sbjct: 56 VEQFSLRWNLLKKIENLDCLTTLTHLEFYDNQIEKVENLDALVNLEILDLSFNRILKIEN 115
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L L+ LY NKISKIE ++ L +L+ LELGDN+I IENL+ L+ L+LG N+
Sbjct: 116 LEKLTKLKTLYFVHNKISKIEGLETLTELEYLELGDNRIAKIENLENNLKLDRLFLGANQ 175
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I I+N+ L L +LSL N + ++N+ LTNL ++YL++NG+ + + + LE L
Sbjct: 176 IKIIENVDHLKNLTVLSLPANAITVVDNIAGLTNLKEIYLAQNGIKYVCGIDEHLPLEIL 235
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D N++ ++NI LT L +FW NQ+SDW+ ++ L L +YLD NP +Q Y
Sbjct: 236 DFNQNRLEKVENIHQLTTLTDFWARGNQLSDWSILDELVRLPHLNCVYLDNNPFSQADTY 295
Query: 301 RRKIKLVCPWIVQIDAT 317
R K+ P I ++D T
Sbjct: 296 RGKVLRFLPQIDRLDGT 312
>gi|301101126|ref|XP_002899652.1| protein phosphatase 1 regulatory subunit, putative [Phytophthora
infestans T30-4]
gi|262103960|gb|EEY62012.1| protein phosphatase 1 regulatory subunit, putative [Phytophthora
infestans T30-4]
Length = 332
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/256 (46%), Positives = 173/256 (67%), Gaps = 1/256 (0%)
Query: 63 RLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLD 122
RL +R NL++ + ++ L L+ LELYDNQ+ +E + L+NL++LDLSFN IR I L+
Sbjct: 67 RLHVRSNLLQSMASVASLVHLEHLELYDNQIQTLEGVQNLVNLKVLDLSFNEIRVIPDLN 126
Query: 123 HLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKIS 182
HL LE+LY+ +NK+ KI ++ L LK L+LG N++R IE LDGLT L+EL+LGKNKI+
Sbjct: 127 HLTKLEELYVANNKLKKISGIETLTTLKKLDLGANRLRTIEGLDGLTELKELWLGKNKIT 186
Query: 183 RIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDV 242
I L L KL I+S+Q NR+ I L +LYLS NG+ IEN+ L T+D
Sbjct: 187 TIQGLEKLAKLKIISVQSNRVVKISGFATNFELEELYLSHNGIEKIENVDHLTHLTTMDF 246
Query: 243 AYNKIS-IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYR 301
A N+I+ I +A LT+L++ W+NDNQ++ + V L + L+T+YL+RNP+AQD YR
Sbjct: 247 AGNRITNIPTTLAALTQLEDLWLNDNQIAQYADVEHLMSLSGLRTLYLERNPLAQDFEYR 306
Query: 302 RKIKLVCPWIVQIDAT 317
+K++ + P + QIDAT
Sbjct: 307 KKLEELLPELDQIDAT 322
>gi|340924169|gb|EGS19072.1| hypothetical protein CTHT_0056940 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 397
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 180/262 (68%), Gaps = 4/262 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++RL LR NLI++IE + + T++EL+LYDN ++ + LD L+NL LDLSFN+I+ IK
Sbjct: 132 LQRLCLRQNLIQEIEGLDGIADTIQELDLYDNLISHVRGLDKLVNLTSLDLSFNKIKHIK 191
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
++HL NL L+ +NKISKIEN++ L KL+ LELG N+IR ++NL LT LEEL++ KN
Sbjct: 192 HVNHLTNLTDLFFVANKISKIENLEGLTKLRNLELGSNRIRELQNLSHLTALEELWVAKN 251
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ ++ LA L L +LS+Q NR+R + L+ + L +LY+S NG+ ++E + N +L
Sbjct: 252 KITSLNGLAGLNNLRLLSIQSNRIRDLSPLKDIPQLEELYISHNGIESLEGISHNTRLRV 311
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA--Q 296
L+V+ N+I+ ++ I L +L+EFW + NQ+ DW V L + + L T+Y + NP+ Q
Sbjct: 312 LEVSSNRITSLKGIGPLKQLEEFWASYNQLGDWTEVERELADKENLTTVYFEGNPLQTRQ 371
Query: 297 DPNYRRKIKLVCPWIVQIDATL 318
YR K++L+ P + QIDAT+
Sbjct: 372 PALYRNKVRLLLPQVRQIDATM 393
>gi|341879110|gb|EGT35045.1| hypothetical protein CAEBREN_25241 [Caenorhabditis brenneri]
Length = 347
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/257 (45%), Positives = 170/257 (66%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E LRWNLIKKIEN+ LTTL LE YDNQ+T +ENLD+L+NLE+LDLSFNRI +I+
Sbjct: 56 VEHFSLRWNLIKKIENLDSLTTLTHLEFYDNQITKVENLDSLVNLEVLDLSFNRITKIEN 115
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L L+ L+ NKI+KIE ++ L KL+ LELGDN+I IENL+ L+ L+LG N+
Sbjct: 116 LEKLTKLKTLFFVHNKITKIEGLETLTKLEYLELGDNRIAQIENLENNLKLDRLFLGANQ 175
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I I+N+ L L +LSL N + ++N+ LT+L ++YL++NG+ I + + LE L
Sbjct: 176 IRVIENVDHLKNLTVLSLPANAITIVDNIAGLTSLKEIYLAQNGIKYICGIDEHLPLEIL 235
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+ N++ ++NI L+ L +FW N++SDW+ ++ L L +YLD NP ++ Y
Sbjct: 236 DLNQNRLEKVENIHQLSTLTDFWARGNKLSDWSILDELVRLPLLSCVYLDSNPFSEADTY 295
Query: 301 RRKIKLVCPWIVQIDAT 317
R K+ P I ++D T
Sbjct: 296 RGKVIRFLPQIYRLDGT 312
>gi|118400777|ref|XP_001032710.1| Leucine Rich Repeat family protein [Tetrahymena thermophila]
gi|89287054|gb|EAR85047.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
Length = 433
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/328 (42%), Positives = 206/328 (62%), Gaps = 19/328 (5%)
Query: 8 NTDEVDNDNLVTLNVEAVENTHGNQMSLDNP--DEESEAETTESKAEDEESKEVC----- 60
N+ ++ N +L N+++ +M +D P ++ESE ++ E E C
Sbjct: 96 NSQQIANQDLEQQNLQSKPKIAYKKMGVDLPINNDESELYLVGNRIGKLEGLENCNNLTN 155
Query: 61 ---------IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLS 111
+ L LR NLI KIE I T+L ELELYDN+LT IE L+TL+NL++LDLS
Sbjct: 156 KKEFKFDNKQKVLCLRNNLIAKIEGISHCTSLLELELYDNKLTKIEGLETLVNLKVLDLS 215
Query: 112 FNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNL 171
+N I++I+GLD L +EK+YL SNKI IEN+D + +LELG NKI I+NLD L L
Sbjct: 216 YNNIKKIEGLDTLKQIEKIYLLSNKIKVIENID-FPECTMLELGANKIEKIQNLDKLPKL 274
Query: 172 EELYLGKNKISRIDNLASLT-KLNILSLQCNRLRTIEN-LEALTNLTQLYLSENGLTTIE 229
ELYLGKN+I I+NL L L L+L NR++ I N + L NL++LY++EN +T IE
Sbjct: 275 TELYLGKNRIQVIENLEPLKDTLKTLALTANRIKYIGNGVSCLENLSELYIAENFITQIE 334
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL 289
L++ L LD++ NKI ++ I +L L E W+N N++ +++ +++L+ N L+T+YL
Sbjct: 335 GLVNFPDLYLLDLSMNKIKKLEGITNLKNLTELWLNINEIENFSDLDILKENDLLETVYL 394
Query: 290 DRNPVAQDPNYRRKIKLVCPWIVQIDAT 317
NPV++ P+YR+K+ + P I QIDAT
Sbjct: 395 AGNPVSRFPSYRQKLMEILPNIQQIDAT 422
>gi|341897835|gb|EGT53770.1| hypothetical protein CAEBREN_12672 [Caenorhabditis brenneri]
Length = 347
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 116/257 (45%), Positives = 170/257 (66%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E LRWNLIKKIEN+ LTTL LE YDNQ+T +ENLD+L+NLE+LDLSFNRI +I+
Sbjct: 56 VEHFSLRWNLIKKIENLDSLTTLTHLEFYDNQITKVENLDSLVNLEVLDLSFNRITKIEN 115
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L L+ L+ NKI+KIE ++ L +L+ LELGDN+I IENL+ L+ L+LG N+
Sbjct: 116 LEKLTKLKTLFFVHNKITKIEGLETLTELEYLELGDNRIAKIENLENNLKLDRLFLGANQ 175
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I I+N+ L L +LSL N + ++N+ LTNL ++YL++NG+ I + + LE L
Sbjct: 176 IRVIENVDHLKNLTVLSLPANAITIVDNIAGLTNLKEIYLAQNGIKYICGIDEHLPLEIL 235
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+ N++ ++NI L+ L +FW N++SDW+ ++ L L +YLD NP ++ Y
Sbjct: 236 DLNQNRLEKVENIHQLSTLTDFWARGNKLSDWSILDELVRLPLLSCVYLDSNPFSEADTY 295
Query: 301 RRKIKLVCPWIVQIDAT 317
R K+ P I ++D T
Sbjct: 296 RGKVIRFLPQIYRLDGT 312
>gi|159130705|gb|EDP55818.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Aspergillus fumigatus A1163]
Length = 356
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/320 (43%), Positives = 201/320 (62%), Gaps = 24/320 (7%)
Query: 21 NVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEV----C---------------I 61
N EAVE+ + + S P EE EA+ + ED E++E+ C +
Sbjct: 21 NPEAVEDPNYSD-SDAPPVEEIEADEDLLEGEDPETQEIDLVHCRIASIPALRLERFHKL 79
Query: 62 ERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+R+ LR N I +I+ + TL EL+LYDN ++ ++ LD +L LDLSFN+I+ IK
Sbjct: 80 QRICLRQNQITRIDFPSEIAPTLLELDLYDNLISHVKGLDEFRDLTSLDLSFNKIKHIKN 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ HL NL LY N+ISKIE ++ L KL+ LELG N+IR IENLD L +LEEL+LGKNK
Sbjct: 140 ISHLVNLTDLYFVQNRISKIEGLEGLTKLRNLELGANRIREIENLDTLASLEELWLGKNK 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + NL +L+ L I+S+Q NRL +I L +L NL +LYLS N +T + L SN L L
Sbjct: 200 ITEMKNLDALSNLRIISIQSNRLTSITGLSSLKNLEELYLSHNAITDLSGLESNTSLRVL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQDP 298
D + NKIS +++I+HL L+E W ++N++S + V L + ++LQT+Y + NP+ + P
Sbjct: 260 DFSNNKISKLEHISHLKNLEELWASNNELSSFEEVERELRDKEKLQTVYFEGNPLQTKGP 319
Query: 299 N-YRRKIKLVCPWIVQIDAT 317
YR K++L P I+QIDA+
Sbjct: 320 AVYRNKVRLALPQIMQIDAS 339
>gi|70990760|ref|XP_750229.1| protein phosphatase PP1 regulatory subunit Sds22 [Aspergillus
fumigatus Af293]
gi|66847861|gb|EAL88191.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Aspergillus fumigatus Af293]
Length = 356
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/321 (43%), Positives = 200/321 (62%), Gaps = 26/321 (8%)
Query: 21 NVEAVENTHGNQMSLDNPD-EESEAETTESKAEDEESKEV----C--------------- 60
N EAVE+ N D P EE EA+ + ED E++E+ C
Sbjct: 21 NPEAVEDP--NYSDSDAPPVEEIEADEDLLEGEDPETQEIDLVHCRIASIPALRLERFHK 78
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++R+ LR N I +I+ + TL EL+LYDN ++ ++ LD +L LDLSFN+I+ IK
Sbjct: 79 LQRICLRQNQITRIDFPSEIAPTLLELDLYDNLISHVKGLDEFRDLTSLDLSFNKIKHIK 138
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL NL LY N+ISKIE ++ L KL+ LELG N+IR IENLD L +LEEL+LGKN
Sbjct: 139 NISHLVNLTDLYFVQNRISKIEGLEGLTKLRNLELGANRIREIENLDTLASLEELWLGKN 198
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + NL +L+ L I+S+Q NRL +I L +L NL +LYLS N +T + L SN L
Sbjct: 199 KITEMKNLDALSNLRIISIQSNRLTSITGLSSLKNLEELYLSHNAITDLSGLESNTSLRV 258
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQD 297
LD + NKIS +++I+HL L+E W ++N++S + V L + ++LQT+Y + NP+ +
Sbjct: 259 LDFSNNKISKLEHISHLKNLEELWASNNELSSFEEVERELRDKEKLQTVYFEGNPLQTKG 318
Query: 298 PN-YRRKIKLVCPWIVQIDAT 317
P YR K++L P I+QIDA+
Sbjct: 319 PAVYRNKVRLALPQIMQIDAS 339
>gi|225563040|gb|EEH11319.1| phosphatase PP1 regulatory subunit sds22 [Ajellomyces capsulatus
G186AR]
Length = 349
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/263 (48%), Positives = 175/263 (66%), Gaps = 8/263 (3%)
Query: 61 IERLLLRWNLIKKI---ENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIRE 117
+E+L LR N I +I EN+ TL +L+LYDN +T I+ LD L L LD SFN I+
Sbjct: 84 VEKLCLRQNQISQINFPENLG--PTLTDLDLYDNLITRIKGLDALTKLTNLDFSFNNIKH 141
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
IK + HL +L+ LY N+I KIE +D L+ L+ LEL N+IR IENLD LT LEEL+LG
Sbjct: 142 IKNISHLVHLKDLYFVQNRIQKIEGLDGLRALRNLELAANRIREIENLDDLTALEELWLG 201
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KNKI+ I N+ +LT L I+SL NRL TI L L NL +LY+S N +T I L +N L
Sbjct: 202 KNKITEIKNIDALTNLKIISLPSNRLTTISGLSNLHNLEELYVSHNAITAISGLENNTNL 261
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-- 294
LD++ N+IS ++NI+HL+ L+EFW ++NQ++ ++ V L + K+L+T+Y + NP+
Sbjct: 262 RVLDISSNQISKLENISHLSHLEEFWASNNQLASFDEVERELGDKKELKTVYFEGNPLQT 321
Query: 295 AQDPNYRRKIKLVCPWIVQIDAT 317
A YR K++L P I QIDAT
Sbjct: 322 ASSVLYRNKVRLALPQIQQIDAT 344
>gi|119496823|ref|XP_001265185.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Neosartorya fischeri NRRL 181]
gi|119413347|gb|EAW23288.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Neosartorya fischeri NRRL 181]
Length = 356
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 203/320 (63%), Gaps = 24/320 (7%)
Query: 21 NVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEV----C---------------I 61
N EAVE+ + + S P EE EA+ + ED E++E+ C +
Sbjct: 21 NPEAVEDPNYSD-SDAPPVEEIEADEDLLEGEDPETQEIDLVHCRITSIPALRLGRFPKL 79
Query: 62 ERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+R+ LR N I +I+ + TL E++LYDN ++ I+ LD +L LDLSFN+I+ IK
Sbjct: 80 QRICLRQNQITRIDFPSEIAPTLLEVDLYDNLISHIKGLDEFRDLTSLDLSFNKIKHIKN 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ HL NL LY N+ISKIE ++ L KL+ LELG N+IR IENLD LT+LEEL+LGKNK
Sbjct: 140 ISHLVNLTDLYFVQNRISKIEGLEGLTKLRNLELGANRIREIENLDTLTSLEELWLGKNK 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + NL +L+ L I+S+Q NRL +I L +L NL +LYLS N +T + L SN L L
Sbjct: 200 ITEMKNLDALSNLRIISIQSNRLTSITGLSSLKNLEELYLSHNAITDLSGLESNTSLRVL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQDP 298
D + N++S +++I+HL L+E W ++N++S + V L++ ++LQT+Y + NP+ + P
Sbjct: 260 DFSNNQVSKLEHISHLKNLEELWASNNELSSFEEVERELKDKEKLQTVYFEGNPLQTKGP 319
Query: 299 N-YRRKIKLVCPWIVQIDAT 317
YR K++L P I+QIDA+
Sbjct: 320 AVYRNKVRLALPQIMQIDAS 339
>gi|410929701|ref|XP_003978238.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like
[Takifugu rubripes]
Length = 437
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 155/208 (74%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L LR NLIKKIEN+ LT+L+EL+LYDNQ+ +ENL L LE LD+SFN +R+++GL+
Sbjct: 88 LSLRQNLIKKIENLDSLTSLRELDLYDNQIRKLENLHQLTELEQLDVSFNILRKVEGLEQ 147
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L +L+KL+L NKIS I N+DH L++LELG N+IR+IENLD L++L+ L+LG NKI++
Sbjct: 148 LTSLKKLFLLHNKISGIANLDHFTCLEMLELGSNRIRVIENLDALSSLQSLFLGTNKITK 207
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ NL L L +LS+Q NR+ +E L+ L +L +LYLS NG+ IE L +N+KL TLD+A
Sbjct: 208 LQNLDGLHNLTVLSIQSNRITKLEGLQNLVSLKELYLSHNGIEVIEGLENNKKLTTLDIA 267
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSD 271
N+I I+NI HLTELQEFW+ + D
Sbjct: 268 ANRIKRIENIGHLTELQEFWMWTGSLPD 295
>gi|341887092|gb|EGT43027.1| hypothetical protein CAEBREN_25749 [Caenorhabditis brenneri]
Length = 326
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 162/235 (68%), Gaps = 2/235 (0%)
Query: 87 ELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHL 146
+LY+NQLT I NL+ L+NL LDLS+NRIR+I GL+ L LE LYL +NKI KIEN++ L
Sbjct: 87 DLYENQLTEISNLENLVNLVSLDLSYNRIRQIVGLNKLNKLEVLYLVNNKIEKIENLEGL 146
Query: 147 KKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTI 206
+L++LELGDN+I+ IEN+ L+NL+EL+LGKNKI +I+ + SL L +LS+ NRL I
Sbjct: 147 TQLRLLELGDNRIKNIENISHLSNLKELFLGKNKIRKIEGVESLKNLQVLSIPGNRLVKI 206
Query: 207 ENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWIND 266
EN+E LTNL +LYLS+ GL I + + KL LDVA N+I + L L +FW ND
Sbjct: 207 ENVEELTNLKELYLSDQGLQDIHGVETLNKLTLLDVANNEIKTFDGVQKLASLNDFWAND 266
Query: 267 NQVSDWNTVNVLENNKQLQTIYLDRNPVA-QDPN-YRRKIKLVCPWIVQIDATLA 319
N+V ++ + L LQT+YL+RNP D N YRRK+ L P + QIDAT+
Sbjct: 267 NKVESFSEIEHLSKLSDLQTVYLERNPFYFHDTNQYRRKVMLTLPQVTQIDATMC 321
>gi|350637996|gb|EHA26352.1| hypothetical protein ASPNIDRAFT_170726 [Aspergillus niger ATCC
1015]
Length = 946
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/295 (43%), Positives = 184/295 (62%), Gaps = 8/295 (2%)
Query: 31 NQMSLDNPD-EESEAETTESKAEDE---ESKEVCIERLLLRWNLIKKIE-NIHMLTTLKE 85
N +L++PD +S+A E DE E ++ ERL R N I +IE + +L E
Sbjct: 627 NPEALEDPDYSDSDAPPVEEIEADEDLLEDEDPDAERLCFRQNQISRIEFPTEVAKSLTE 686
Query: 86 LELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDH 145
L+LYDN ++ ++ LD NL LDLSFN+I+ +K + HL L LY NKISKIE V+
Sbjct: 687 LDLYDNLISHVKGLDEFENLTSLDLSFNKIKHVKNISHLVKLTDLYFVQNKISKIEGVET 746
Query: 146 LKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRT 205
L+ LELG N+IR IENLD L LEEL+LGKNKI+ + NL L+ L ILS+Q NRL
Sbjct: 747 FTSLRNLELGANRIREIENLDNLKALEELWLGKNKITELKNLDGLSNLRILSIQSNRLTK 806
Query: 206 IENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWIN 265
I L L NL +LY+S N +T + L N L LD + N++S +++++HL L+E W +
Sbjct: 807 ISGLANLKNLEELYVSHNAITDLSGLEENTSLRVLDFSNNQVSKLEHLSHLKNLEELWAS 866
Query: 266 DNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQDPN-YRRKIKLVCPWIVQIDAT 317
+NQ+S ++ V L + + LQT+Y + NP+ + P YR K++L P I+Q+DA+
Sbjct: 867 NNQLSSFDEVERELRDKENLQTVYFEGNPLQTRAPALYRNKVRLAIPHIMQVDAS 921
>gi|406604865|emb|CCH43740.1| hypothetical protein BN7_3294 [Wickerhamomyces ciferrii]
Length = 350
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/318 (42%), Positives = 202/318 (63%), Gaps = 23/318 (7%)
Query: 23 EAVENTHGNQMSLDNPDE-ESEAETTESKAEDEESKEVC-----------------IERL 64
+ G + D+PD+ +++A+ T +D E ++ ++ L
Sbjct: 30 QPTSGIQGQIIPDDHPDQIDADADLTNDYPDDSEYVDLIHLKIRSMEDLNLGRFKNLKGL 89
Query: 65 LLRWNLIKKIENIHMLTT-LKELELYDNQLTVIE-NLDTLINLEILDLSFNRIREIKGLD 122
+LR NL+ I ++ + ++EL+ YDN++ I +L+ LI L+ LDLSFN+IR IK ++
Sbjct: 90 VLRQNLLDSISDVKNINQDIEELDFYDNRIKHISSHLNGLIKLKNLDLSFNKIRNIKNIE 149
Query: 123 HLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKIS 182
+L LE LY NKIS+I N+D+ KLK LELG N+I IENLD L NLEEL+LGKNKI
Sbjct: 150 NLTELENLYFVQNKISEIVNLDNFTKLKNLELGGNRISKIENLDKLENLEELWLGKNKIP 209
Query: 183 RIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDV 242
R +NL L L ILS+Q NR+ +E LE L NL +LY+S NG+ IE L +N+KL TLD+
Sbjct: 210 RFENLNPLRNLKILSIQSNRITKLEGLENLVNLEELYVSHNGIEKIEGLENNKKLTTLDI 269
Query: 243 AYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QDP-N 299
N+I+ ++N++HLTEL + W + N++S ++ V L++ KQL T+Y + NP+ Q+P +
Sbjct: 270 TSNRITDLENLSHLTELTDLWASSNKISSFDQVEKELKDLKQLDTVYFEGNPLQLQNPTS 329
Query: 300 YRRKIKLVCPWIVQIDAT 317
YRRK+ + P + +IDAT
Sbjct: 330 YRRKLIMFLPQVQKIDAT 347
>gi|324517259|gb|ADY46769.1| Protein phosphatase 1 regulatory subunit 7 [Ascaris suum]
Length = 305
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 122/259 (47%), Positives = 171/259 (66%), Gaps = 1/259 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LRWNLI KIEN+ L L L LYDNQ+T I L+ L +LE LDLSFNRI +I G
Sbjct: 4 LKSLCLRWNLITKIENLDGLQHLTLLNLYDNQITEIAGLENLTSLETLDLSFNRIEKIDG 63
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ LYL NKI KIEN+DHL +L++LELGDN+IR IEN+D LT L++L+LG N+
Sbjct: 64 LGTLRNLKTLYLVHNKIRKIENLDHLNRLELLELGDNRIRCIENIDKLTQLKKLFLGANQ 123
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I I+NL LT L +LSL N ++ IE L L L +L LS+NG+ IE L +N L +
Sbjct: 124 IRMIENLDRLTNLTVLSLPGNAIKKIEGLSKLATLQELILSQNGIQNIEGLENNVALRLI 183
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D++ N++ I+N+ HL EL+ W+ +N+ +DW+ ++ LE +L+ + ++NP +Y
Sbjct: 184 DLSDNRLERIENVQHLQELETIWLRNNKFTDWD-LSALEGLPKLRHVSFEKNPCCGSDDY 242
Query: 301 RRKIKLVCPWIVQIDATLA 319
R ++ P I ID A
Sbjct: 243 RFEVIKRMPKIKTIDCVPA 261
>gi|261188236|ref|XP_002620534.1| protein phosphatase regulatory subunit Sds22 [Ajellomyces
dermatitidis SLH14081]
gi|239593281|gb|EEQ75862.1| protein phosphatase regulatory subunit Sds22 [Ajellomyces
dermatitidis SLH14081]
Length = 351
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 201/329 (61%), Gaps = 16/329 (4%)
Query: 5 TVPNTDEVDNDNLVTLNVEAVENT-----HG---NQMSLDNPD--EESEAETTESKAEDE 54
+ P DE+D+ N + + + H N +L++PD +E+ E +A+++
Sbjct: 18 SPPANDEIDDSNAAMKDSKGWDGKLRVERHAVLTNPEALEDPDYSDENAPPLEEIEADED 77
Query: 55 ESKEVC--IERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLS 111
++ +E+L LR N I ++ L TL +L+LYDN +T I LD L LDLS
Sbjct: 78 LLSDLGNDVEKLCLRQNQIARMSFPENLGPTLTDLDLYDNLITRIRGLDGFTKLTSLDLS 137
Query: 112 FNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNL 171
FN I+ IK + HL +L LY N+I KIE +D LK L+ LEL N+IR IENLD LT L
Sbjct: 138 FNNIKHIKNVSHLVHLTDLYFVQNRIQKIEGLDGLKVLRNLELAANRIREIENLDDLTAL 197
Query: 172 EELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
EEL+LGKNKI+ I N+ +LT L I+SL NRL TI L L NL +LY+S N +T I L
Sbjct: 198 EELWLGKNKITEIKNIDALTNLKIISLPSNRLTTISGLSKLQNLEELYVSHNAITAISGL 257
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLD 290
+N L LD++ N+IS ++NI+HLT L+E W ++NQ++ ++ V L++ ++L+T+Y +
Sbjct: 258 ENNTNLRVLDISSNQISKLENISHLTHLEELWASNNQLASFDEVERELKDKEELKTVYFE 317
Query: 291 RNPVAQDPN--YRRKIKLVCPWIVQIDAT 317
NP+ + YR K++L P + QIDAT
Sbjct: 318 GNPLQTNSPVLYRNKVRLTLPQVQQIDAT 346
>gi|259489331|tpe|CBF89513.1| TPA: protein phosphatase PP1 regulatory subunit Sds22, putative
(AFU_orthologue; AFUA_1G04800) [Aspergillus nidulans
FGSC A4]
Length = 355
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/261 (46%), Positives = 180/261 (68%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++RL LR N I +IE L TL+EL+LYDN ++ ++ LD NL LDLSFN+++ IK
Sbjct: 79 LQRLCLRQNQISRIELPSSLGETLQELDLYDNLISHLKGLDDFHNLTSLDLSFNKLKHIK 138
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL L+ LY NKISKIE ++ L ++K LELG NKIR IENL+ L+ LEEL+LGKN
Sbjct: 139 NISHLVKLKDLYFVQNKISKIEGLEGLTEIKNLELGANKIREIENLETLSALEELWLGKN 198
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + NL +LT L ILS+Q NRL +++ L +L NL +LY+S N +T + L SN L
Sbjct: 199 KITEMKNLDALTNLRILSIQSNRLTSLKGLSSLKNLEELYVSHNAITDLAGLESNNALRV 258
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVAQDP 298
LD + N++S +++++HL EL+E W ++NQ+S +N V L++ + L+T+Y + NP+ +
Sbjct: 259 LDFSNNQVSKLEHLSHLKELEELWASNNQLSSFNEVERELKDKENLKTVYFEGNPLQTNG 318
Query: 299 N--YRRKIKLVCPWIVQIDAT 317
YR K++L P I+QIDA+
Sbjct: 319 PVVYRNKVRLAIPQIMQIDAS 339
>gi|239609314|gb|EEQ86301.1| protein phosphatase regulatory subunit Sds22 [Ajellomyces
dermatitidis ER-3]
Length = 351
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 201/329 (61%), Gaps = 16/329 (4%)
Query: 5 TVPNTDEVDNDNLVTLNVEAVENT-----HG---NQMSLDNPD--EESEAETTESKAEDE 54
+ P DE+D+ N + + + H N +L++PD +E+ E +A+++
Sbjct: 18 SPPANDEIDDSNAAMKDSKGWDGKLRVERHAVLTNPEALEDPDYSDENAPPLEEIEADED 77
Query: 55 ESKEVC--IERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLS 111
++ +E+L LR N I ++ L TL +L+LYDN +T I LD L LDLS
Sbjct: 78 LLSDLGNDVEKLCLRQNQIARMSFPENLGPTLTDLDLYDNLITRIRGLDGFTKLTSLDLS 137
Query: 112 FNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNL 171
FN I+ IK + HL +L LY N+I KIE +D LK L+ LEL N+IR IENLD LT L
Sbjct: 138 FNNIKHIKNVSHLVHLTDLYFVQNRIQKIEGLDGLKVLRNLELAANRIREIENLDDLTAL 197
Query: 172 EELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
EEL+LGKNKI+ I N+ +LT L I+SL NRL TI L L NL +LY+S N +T I L
Sbjct: 198 EELWLGKNKITEIKNIDALTNLKIISLPSNRLTTISGLSNLQNLEELYVSHNAITAISGL 257
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLD 290
+N L LD++ N+IS ++NI+HLT L+E W ++NQ++ ++ V L++ ++L+T+Y +
Sbjct: 258 ENNTNLRVLDISSNQISKLENISHLTHLEELWASNNQLASFDEVERELKDKEELKTVYFE 317
Query: 291 RNPVAQDPN--YRRKIKLVCPWIVQIDAT 317
NP+ + YR K++L P + QIDAT
Sbjct: 318 GNPLQTNSPVLYRNKVRLTLPQVQQIDAT 346
>gi|17531555|ref|NP_495634.1| Protein C06A8.6 [Caenorhabditis elegans]
gi|351065493|emb|CCD61464.1| Protein C06A8.6 [Caenorhabditis elegans]
Length = 349
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/257 (44%), Positives = 167/257 (64%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E RWNLIKKIEN+ LTTL LE YDNQ+T +ENLD+L+NLE LDLSFNRI +I+
Sbjct: 56 VEHFSFRWNLIKKIENLDCLTTLTHLEFYDNQITKVENLDSLVNLESLDLSFNRITKIEN 115
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L L+ L+ NKI+KIE +D L +L+ LELGDN+I IENLD L+ L+LG N+
Sbjct: 116 LEKLTKLKTLFFVHNKITKIEGLDTLTELEYLELGDNRIAKIENLDNNLKLDRLFLGANQ 175
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I I+N+ L KL +LSL N + ++N+ L NL ++YL++NG+ + + + LE L
Sbjct: 176 IRLIENVDHLKKLTVLSLPANAITVVDNISGLHNLKEIYLAQNGIKYVCGIDEHLPLEIL 235
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D N++ ++NI L L +FW N++ +W+ ++ L QL ++YLD NP+A Y
Sbjct: 236 DFNQNRLEKVENIHQLKTLTDFWARGNKLDNWSIMDELVELPQLNSVYLDFNPIASVDTY 295
Query: 301 RRKIKLVCPWIVQIDAT 317
R K+ + I ++D T
Sbjct: 296 RGKVIHLLQQITRLDGT 312
>gi|240279860|gb|EER43365.1| protein phosphatase PP1 regulatory subunit sds22 [Ajellomyces
capsulatus H143]
Length = 360
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 126/263 (47%), Positives = 173/263 (65%), Gaps = 8/263 (3%)
Query: 61 IERLLLRWNLIKKI---ENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIRE 117
+E+L LR N I +I EN+ TL +L+LYDN +T I+ LD L L LD SFN I+
Sbjct: 95 LEKLCLRQNQISQINFPENLG--PTLTDLDLYDNLITRIKGLDALTKLTNLDFSFNNIKH 152
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
IK + HL +L+ LY N+I IE +D L+ L+ LEL N+IR IENLD LT LEEL+LG
Sbjct: 153 IKNISHLVHLKDLYFVQNRIQNIEGLDGLRALRNLELAANRIREIENLDDLTALEELWLG 212
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KNKI+ I N+ +LT L I+SL NRL TI L L NL +LY+S N +T I L +N L
Sbjct: 213 KNKITEIKNIDALTNLKIISLPSNRLTTISGLSNLHNLEELYVSHNAITAISGLENNTNL 272
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-- 294
LD++ N+IS ++NI+HL+ L+EFW ++NQ++ + V L + K+L+T+Y + NP+
Sbjct: 273 RVLDISSNQISKLENISHLSHLEEFWASNNQLASFGEVERELGDKKELKTVYFEGNPLQT 332
Query: 295 AQDPNYRRKIKLVCPWIVQIDAT 317
A YR K++L P I QIDAT
Sbjct: 333 ASSVLYRNKVRLALPQIQQIDAT 355
>gi|325092988|gb|EGC46298.1| protein phosphatase PP1 regulatory subunit sds22 [Ajellomyces
capsulatus H88]
Length = 344
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 126/263 (47%), Positives = 173/263 (65%), Gaps = 8/263 (3%)
Query: 61 IERLLLRWNLIKKI---ENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIRE 117
+E+L LR N I +I EN+ TL +L+LYDN +T I+ LD L L LD SFN I+
Sbjct: 79 LEKLCLRQNQISQINFPENLG--PTLTDLDLYDNLITRIKGLDALTKLTNLDFSFNNIKH 136
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
IK + HL +L+ LY N+I IE +D L+ L+ LEL N+IR IENLD LT LEEL+LG
Sbjct: 137 IKNISHLVHLKDLYFVQNRIQNIEGLDGLRALRNLELAANRIREIENLDDLTALEELWLG 196
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KNKI+ I N+ +LT L I+SL NRL TI L L NL +LY+S N +T I L +N L
Sbjct: 197 KNKITEIKNIDALTNLKIISLPSNRLTTISGLSNLHNLEELYVSHNAITAISGLENNTNL 256
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-- 294
LD++ N+IS ++NI+HL+ L+EFW ++NQ++ + V L + K+L+T+Y + NP+
Sbjct: 257 RVLDISSNQISKLENISHLSHLEEFWASNNQLASFGEVERELGDKKELKTVYFEGNPLQT 316
Query: 295 AQDPNYRRKIKLVCPWIVQIDAT 317
A YR K++L P I QIDAT
Sbjct: 317 ASSVLYRNKVRLALPQIQQIDAT 339
>gi|170099395|ref|XP_001880916.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644441|gb|EDR08691.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 341
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 129/264 (48%), Positives = 171/264 (64%), Gaps = 7/264 (2%)
Query: 61 IERLLLRWNLIKKI--ENIHMLTTLKELELYDNQL-TVIENLDTLINLEILDLSFNRIRE 117
+ +L LR N I + E +H LT L+EL+LYDN++ TV + LD L +L +LDLSFN +R
Sbjct: 73 LRKLCLRQNFISHLDSETLHQLTKLEELDLYDNKVKTVGDALDKLSSLTVLDLSFNLLRA 132
Query: 118 IKG-LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYL 176
+ L+ L +L+ +Y N+IS I + L+ LELG NKIR IENLD L NLEEL+L
Sbjct: 133 VPDRLECLTSLQTIYFVQNRISSISGLSSCGTLRSLELGGNKIRKIENLDSLVNLEELWL 192
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEK 236
GKNKI++++ L +L KL ILSLQ NR+ +ENLE L +L QLYLS NG+ IE L N K
Sbjct: 193 GKNKITKLEGLGALKKLKILSLQSNRITKLENLEELNDLEQLYLSHNGVKRIEGLEHNSK 252
Query: 237 LETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNP-- 293
L TLDV N I ++N++HLT L E W+N N + D + + L L+T+YL+ NP
Sbjct: 253 LTTLDVGNNFIPAVENLSHLTCLGELWMNGNVIPDLRALESELGKIATLETLYLEANPCQ 312
Query: 294 VAQDPNYRRKIKLVCPWIVQIDAT 317
A YRRKI L P + QIDAT
Sbjct: 313 AADMTGYRRKIMLALPQLKQIDAT 336
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 72/131 (54%), Gaps = 4/131 (3%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V +E L L N I K+E + L LK L L N++T +ENL+ L +LE L LS N ++ I
Sbjct: 185 VNLEELWLGKNKITKLEGLGALKKLKILSLQSNRITKLENLEELNDLEQLYLSHNGVKRI 244
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKI---RIIEN-LDGLTNLEEL 174
+GL+H + L L + +N I +EN+ HL L L + N I R +E+ L + LE L
Sbjct: 245 EGLEHNSKLTTLDVGNNFIPAVENLSHLTCLGELWMNGNVIPDLRALESELGKIATLETL 304
Query: 175 YLGKNKISRID 185
YL N D
Sbjct: 305 YLEANPCQAAD 315
>gi|378731305|gb|EHY57764.1| adenylate cyclase [Exophiala dermatitidis NIH/UT8656]
Length = 409
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 123/263 (46%), Positives = 176/263 (66%), Gaps = 6/263 (2%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++RL LR N I+ I + TL+EL+LYDN ++ I+ L+ + NL LDLSFN+I+ IK
Sbjct: 143 VKRLCLRQNAIQSISLPAELGETLQELDLYDNLISHIKGLEDMKNLTSLDLSFNKIKHIK 202
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
++HL L++LY N+ISKIEN+++L L ++ELG N+IR IENL+ L NL EL+LGKN
Sbjct: 203 NVNHLQKLKELYFVQNRISKIENLENLDNLTMIELGANRIREIENLEPLHNLRELWLGKN 262
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE--NLLSNEKL 237
KI+ I L SLT L +L ++ NRL TI L+ L NL +LY+S NG+T I L +N KL
Sbjct: 263 KITEIKGLNSLTNLRLLDIKSNRLTTISGLDTLPNLEELYVSHNGITEISATALANNPKL 322
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNP--V 294
LD++ N+IS + NI HL +L+E W + N++SD+ V L + + L+T+Y + NP +
Sbjct: 323 RVLDISNNQISHLANIGHLQDLEELWASSNKLSDFREVERELADKEHLETVYFEMNPLQL 382
Query: 295 AQDPNYRRKIKLVCPWIVQIDAT 317
YR KI+L P + QIDAT
Sbjct: 383 TAPAVYRNKIRLALPQVKQIDAT 405
>gi|347440883|emb|CCD33804.1| similar to protein phosphatase PP1 regulatory subunit sds22
[Botryotinia fuckeliana]
Length = 381
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/267 (44%), Positives = 180/267 (67%), Gaps = 4/267 (1%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNR 114
S+ ++RL LR N I IE++ L +TL +L+LYDN + I L+ LINL LDLSFN+
Sbjct: 111 SRFTQVQRLCLRQNTISAIEDLSCLASTLTDLDLYDNLIAHIRGLEDLINLTSLDLSFNK 170
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
++ IK L+HL +L LY NKI+ IEN++ L KL+ LEL N+IR I+ LD LT LEEL
Sbjct: 171 LKHIKKLNHLTSLTDLYFVQNKITTIENLEGLSKLRNLELAANRIREIQGLDTLTGLEEL 230
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LGKNKI+ + NL +L L ILS+Q NR+R I L+ L+ L +LY+S N L+++ L S
Sbjct: 231 WLGKNKITEMKNLDALQNLKILSIQSNRIRDITGLDKLSGLEELYISHNALSSLSGLESC 290
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNP 293
+L LD++ N++S ++ + L EL+E W + N+++D+N V L++ ++L T+Y + NP
Sbjct: 291 SQLRVLDISNNEVSSLKGLEGLKELEEVWASYNKIADFNDVEEHLKDKEKLNTVYFEGNP 350
Query: 294 VA-QDPN-YRRKIKLVCPWIVQIDATL 318
+ + P YR K++L P ++QIDAT
Sbjct: 351 LQLKGPALYRNKVRLALPQVMQIDATF 377
>gi|327354410|gb|EGE83267.1| hypothetical protein BDDG_06211 [Ajellomyces dermatitidis ATCC
18188]
Length = 365
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/262 (46%), Positives = 171/262 (65%), Gaps = 4/262 (1%)
Query: 60 CIERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
I++L LR N I ++ L TL +L+LYDN +T I LD L LDLSFN I+ I
Sbjct: 99 TIQKLCLRQNQIARMSFPENLGPTLTDLDLYDNLITRIRGLDGFTKLTSLDLSFNNIKHI 158
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
K + HL +L LY N+I KIE +D LK L+ LEL N+IR IENLD LT LEEL+LGK
Sbjct: 159 KNVSHLVHLTDLYFVQNRIQKIEGLDGLKVLRNLELAANRIREIENLDDLTALEELWLGK 218
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
NKI+ I N+ +LT L I+SL NRL TI L L NL +LY+S N +T I L +N L
Sbjct: 219 NKITEIKNIDALTNLKIISLPSNRLTTISGLSNLQNLEELYVSHNAITAISGLENNTNLR 278
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVAQD 297
LD++ N+IS ++NI+HLT L+E W ++NQ++ ++ V L++ ++L+T+Y + NP+ +
Sbjct: 279 VLDISSNQISKLENISHLTHLEELWASNNQLASFDEVERELKDKEELKTVYFEGNPLQTN 338
Query: 298 PN--YRRKIKLVCPWIVQIDAT 317
YR K++L P + QIDAT
Sbjct: 339 SPVLYRNKVRLTLPQVQQIDAT 360
>gi|325186913|emb|CCA21457.1| protein phosphatase 1 regulatory subunit putative [Albugo laibachii
Nc14]
Length = 310
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/258 (47%), Positives = 174/258 (67%), Gaps = 8/258 (3%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L +R NL+ ++ + L +L LELYDN++ VI LD L+NL++LDLSFN IR + + H
Sbjct: 53 LQVRSNLLTSMDEVESLRSLVHLELYDNRIKVIPCLDELVNLQVLDLSFNEIRVLPDMSH 112
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L L +L++ SNK+ I + L LK L+LG N+IR+IE LD L NLE+L+LGKNKI +
Sbjct: 113 LPQLRELFVASNKLVTITGISKLSGLKKLDLGANRIRLIEGLDHLENLEQLWLGKNKIEK 172
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
++ L L L ILS+Q NRL +E ++ LTNL +LYLS N + T++N+ + LE LDV
Sbjct: 173 MEGLEHLNSLRILSIQSNRLVEMEGMDQLTNLKELYLSHNAIETLKNMENLINLEILDVG 232
Query: 244 YNKIS-IIQNIAHLTELQEFWINDN---QVSDWNTVNVLENNKQLQTIYLDRNPVAQDPN 299
NKI+ I +IA L ELQ+ W+NDN Q+ D N V L ++ T+YL+RNPV++D N
Sbjct: 233 ANKITRIPTDIAFLVELQDLWLNDNMIEQLEDVNNVKAL----KMTTLYLERNPVSKDEN 288
Query: 300 YRRKIKLVCPWIVQIDAT 317
YR+K+ + P + Q+DAT
Sbjct: 289 YRQKVIDMLPKLEQLDAT 306
>gi|317144237|ref|XP_001819988.2| phosphatase 1 regulatory subunit SDS22 [Aspergillus oryzae RIB40]
Length = 344
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/262 (45%), Positives = 177/262 (67%), Gaps = 4/262 (1%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++R+ LR N I +I + +L EL+LYDN ++ ++ LD +L LDLSFN+I+ IK
Sbjct: 79 VQRICLRQNQITRIAFPPEVAGSLVELDLYDNLISHVKGLDEFKDLTSLDLSFNKIKHIK 138
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL L LY NKISKIE ++ LK L+ LELG N+IR IENL+ LT+LEEL+LGKN
Sbjct: 139 NISHLVKLTDLYFVQNKISKIEGLEGLKVLRNLELGANRIREIENLESLTSLEELWLGKN 198
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ NL +L L ILS+Q NRL ++ L +L NL +LY+S N +T + L SN KL
Sbjct: 199 KITEFKNLDALQNLKILSIQSNRLTSLNGLSSLKNLEELYVSHNAITELSGLESNTKLRV 258
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQD 297
LD + N++S +++++HL L+E W ++NQ+S ++ V L++ ++LQT+Y + NP+ +
Sbjct: 259 LDFSNNQVSKLEHLSHLENLEELWGSNNQLSSFDEVEKELKDKEKLQTVYFEGNPLQTKG 318
Query: 298 PN-YRRKIKLVCPWIVQIDATL 318
P YR K++L P I+QIDAT
Sbjct: 319 PAVYRNKVRLAIPHIMQIDATF 340
>gi|353240007|emb|CCA71895.1| probable SDS22-protein phosphatase 1, regulatory subunit 7
[Piriformospora indica DSM 11827]
Length = 337
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/270 (45%), Positives = 178/270 (65%), Gaps = 13/270 (4%)
Query: 57 KEVCIERLLLRWNLIKKIEN--IHMLTTLKELELYDNQLTVIEN-LDTLINLEILDLSFN 113
+ +C LR N + +E+ L L+E + YDN+L + N LD +L ILDLSFN
Sbjct: 70 RSIC-----LRANFLTDLESDVFGPLVHLEEADFYDNRLKQLGNALDGKASLRILDLSFN 124
Query: 114 RIREIKG-LDHLANLEKLYLCSNKISKIENVDHLKK-LKVLELGDNKIRIIENLDGLTNL 171
+R + L ++ L+ +Y NKI++IE+ HL L+ LELG N+IR+IENLD L NL
Sbjct: 125 LLRAVPPELVNIPALQTIYFVQNKITRIEHFHHLGATLRSLELGSNRIRVIENLDALVNL 184
Query: 172 EELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
EEL+LGKNKI++++NL L KL +LS+Q NR+ IE LE L NL +LY+S NGL IE L
Sbjct: 185 EELWLGKNKITKLENLDKLVKLRLLSIQSNRITRIEGLEKLVNLEELYMSHNGLEKIEGL 244
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLD 290
+N KL TLDV N I+ ++N++HL++LQEFW + NQ++D T++ L +L+T+YL+
Sbjct: 245 ENNVKLTTLDVGNNMITAVENVSHLSDLQEFWASYNQIADIKTIDKELGGLAKLETVYLE 304
Query: 291 RNPVAQD--PNYRRKIKLVCPWIVQIDATL 318
NP + NYRR++ + P + QIDATL
Sbjct: 305 GNPAQRTDMANYRRRLIIALPQLKQIDATL 334
>gi|452825141|gb|EME32139.1| protein phosphatase 1 [Galdieria sulphuraria]
Length = 304
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/260 (46%), Positives = 176/260 (67%), Gaps = 3/260 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ERL+LR N I +++ I L L EL+LYDN+L IENL L+ LDLSFN I +I
Sbjct: 43 LERLILRQNKIDRLQGISSLENLVELDLYDNKLKHIENLSGFTKLKRLDLSFNHISDISS 102
Query: 121 LDH--LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L +L++LYL N I +I +++LK L++LELGDNKIR IENL+ + L+ L+LG+
Sbjct: 103 LKQQCLDSLKELYLIHNHIKQIAGLENLKSLELLELGDNKIRKIENLNSSSCLQSLWLGR 162
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
NKIS+++NL++L+ L LSLQ NR+ IENL+AL L +LYLS N L ++ L S L
Sbjct: 163 NKISKVENLSNLSSLRCLSLQSNRIERIENLDALVMLEELYLSFNKLESVSGLPSLSHLR 222
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL-ENNKQLQTIYLDRNPVAQD 297
LD+ N+I + + L EL+E WINDN + D++ +++L E +L+TIYL+ NP++QD
Sbjct: 223 VLDLGNNRIRNFEGLVFLHELRELWINDNNIDDFSQLDILHEKTPKLETIYLEGNPLSQD 282
Query: 298 PNYRRKIKLVCPWIVQIDAT 317
YR K+ + P + Q+DAT
Sbjct: 283 SEYRTKVMEILPHLKQLDAT 302
>gi|389750156|gb|EIM91327.1| L domain-like protein [Stereum hirsutum FP-91666 SS1]
Length = 358
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/266 (47%), Positives = 179/266 (67%), Gaps = 8/266 (3%)
Query: 61 IERLLLRWNLIKKIEN--IHMLTTLKELELYDNQL-TVIENLDTLINLEILDLSFNRIRE 117
++RL LR N I ++ +LT L+EL+LYDN++ TV + L+ L L +LDLSFN ++
Sbjct: 89 LKRLCLRQNFITFLDPAVFGILTKLEELDLYDNKIKTVGDALNALSTLSVLDLSFNLLKA 148
Query: 118 IK-GLDHLANLEKLYLCSNKISKIENVDHLKK-LKVLELGDNKIRIIENLDGLTNLEELY 175
+ GL+HL +L +Y N+I++I ++ + L+ LELG NKIR IENLD L NLEEL+
Sbjct: 149 VPDGLEHLKSLRTVYFVQNRITRISGLEGVGSTLRSLELGGNKIRRIENLDTLVNLEELW 208
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LGKNKI+ ++NL++L +L IL+LQ NR+ IE L+ L NL +LYLS NG+ +E L N
Sbjct: 209 LGKNKITNLENLSALKRLKILALQSNRITKIEGLDGLENLEELYLSHNGVKRLEGLEHNT 268
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPV 294
KL TLD+ N IS ++NI+HL L E W+N+N++ + + + L + L+TIYL+ NP
Sbjct: 269 KLTTLDIGNNFISELENISHLKALTELWMNNNKIPNLQGLESQLSSLPDLETIYLEGNPC 328
Query: 295 --AQDPNYRRKIKLVCPWIVQIDATL 318
A+ NYRRKI L P I QIDAT
Sbjct: 329 QHAEGANYRRKIILALPNITQIDATF 354
>gi|391867838|gb|EIT77077.1| protein phosphatase 1, regulatory subunit [Aspergillus oryzae
3.042]
Length = 344
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/262 (45%), Positives = 177/262 (67%), Gaps = 4/262 (1%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++R+ LR N I +I + +L EL+LYDN ++ ++ LD +L LDLSFN+I+ IK
Sbjct: 79 VQRICLRQNQITRIAFPPEIAGSLVELDLYDNLISHVKGLDEFKDLTSLDLSFNKIKHIK 138
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL L LY NKISKIE ++ LK L+ LELG N+IR IENL+ LT+LEEL+LGKN
Sbjct: 139 NISHLVKLTDLYFVQNKISKIEGLEGLKVLRNLELGANRIREIENLESLTSLEELWLGKN 198
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ NL +L L ILS+Q NRL ++ L +L NL +LY+S N +T + L SN KL
Sbjct: 199 KITEFKNLDALQNLKILSIQSNRLTSLNGLSSLKNLEELYVSHNAITELSGLESNTKLRV 258
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQD 297
LD + N++S +++++HL L+E W ++NQ+S ++ V L++ ++LQT+Y + NP+ +
Sbjct: 259 LDFSNNQVSKLEHLSHLENLEELWGSNNQLSSFDEVEKELKDKEKLQTVYFEGNPLQTKG 318
Query: 298 PN-YRRKIKLVCPWIVQIDATL 318
P YR K++L P I+QIDAT
Sbjct: 319 PAVYRNKVRLAIPHIMQIDATF 340
>gi|392868369|gb|EAS34147.2| protein phosphatase PP1 regulatory subunit sds22 [Coccidioides
immitis RS]
Length = 344
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/261 (47%), Positives = 175/261 (67%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+E+L LR N I ++ L TLK+L+LYDN ++ I+ LD L NL LDLSFN I+ IK
Sbjct: 79 LEKLCLRQNQIPRMSFPDNLGPTLKDLDLYDNLISHIKGLDQLTNLTSLDLSFNNIKHIK 138
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L L LY N+I KIE ++ L KL+ LELG N+IR IENLD LT+LEEL+LGKN
Sbjct: 139 NLSKLVQLTDLYFVQNRIQKIEGLEGLTKLRNLELGANRIREIENLDDLTSLEELWLGKN 198
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ I N++ L+ L ILSL NRL ++ L LTNL +LY+S N +T I L S L
Sbjct: 199 KITEIKNISHLSNLKILSLPSNRLTSLSGLSGLTNLEELYVSHNAITHISGLESLNNLHV 258
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQD 297
LD++ N+IS ++NI+HL+ ++E W ++N+++ ++ V L N ++L+T+Y + NP+ +
Sbjct: 259 LDISNNQISTLENISHLSHIEELWASNNKLASFDEVERELRNKEELKTVYFEGNPLQTRG 318
Query: 298 PN-YRRKIKLVCPWIVQIDAT 317
P YR K++L P I QIDAT
Sbjct: 319 PALYRNKVRLALPQIQQIDAT 339
>gi|212540112|ref|XP_002150211.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Talaromyces marneffei ATCC 18224]
gi|210067510|gb|EEA21602.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Talaromyces marneffei ATCC 18224]
Length = 348
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/261 (47%), Positives = 174/261 (66%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL LR N I +IE L TLKEL+LYDN ++ ++ LD L+NL +LDLSFN+I+ IK
Sbjct: 83 LERLCLRQNQISRIELPSTLGATLKELDLYDNLISHVKGLDDLVNLTLLDLSFNKIKHIK 142
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL L ++ N+IS IE ++ L L+ LELG N+IR I+ LD L LE+L+LGKN
Sbjct: 143 NVSHLTKLTDIFFVQNRISTIEGLEELVHLRNLELGANRIREIQGLDNLKALEQLWLGKN 202
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + NL+SL+ L ILS+Q NRL +I L L NL +LY+S N LT + L +N+ L
Sbjct: 203 KITEMKNLSSLSNLKILSIQSNRLTSITGLNELPNLEELYISHNALTDLSGLENNKNLRV 262
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QD 297
LD + NK++ ++ I+ LTEL+E W + N +S + V L + K+L+T+Y + NP+ +
Sbjct: 263 LDFSNNKVTKLEGISQLTELEEVWASSNGLSSFEEVERELSDKKKLETVYFEGNPLQLKS 322
Query: 298 PN-YRRKIKLVCPWIVQIDAT 317
P YR KI+L P I QIDAT
Sbjct: 323 PALYRNKIRLALPQIKQIDAT 343
>gi|83767847|dbj|BAE57986.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 352
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/263 (45%), Positives = 178/263 (67%), Gaps = 4/263 (1%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++R+ LR N I +I + +L EL+LYDN ++ ++ LD +L LDLSFN+I+ IK
Sbjct: 79 VQRICLRQNQITRIAFPPEVAGSLVELDLYDNLISHVKGLDEFKDLTSLDLSFNKIKHIK 138
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL L LY NKISKIE ++ LK L+ LELG N+IR IENL+ LT+LEEL+LGKN
Sbjct: 139 NISHLVKLTDLYFVQNKISKIEGLEGLKVLRNLELGANRIREIENLESLTSLEELWLGKN 198
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ NL +L L ILS+Q NRL ++ L +L NL +LY+S N +T + L SN KL
Sbjct: 199 KITEFKNLDALQNLKILSIQSNRLTSLNGLSSLKNLEELYVSHNAITELSGLESNTKLRV 258
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQD 297
LD + N++S +++++HL L+E W ++NQ+S ++ V L++ ++LQT+Y + NP+ +
Sbjct: 259 LDFSNNQVSKLEHLSHLENLEELWGSNNQLSSFDEVEKELKDKEKLQTVYFEGNPLQTKG 318
Query: 298 PN-YRRKIKLVCPWIVQIDATLA 319
P YR K++L P I+QIDA+ A
Sbjct: 319 PAVYRNKVRLAIPHIMQIDASTA 341
>gi|331222282|ref|XP_003323815.1| hypothetical protein PGTG_05717 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309302805|gb|EFP79396.1| hypothetical protein PGTG_05717 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 403
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/299 (45%), Positives = 186/299 (62%), Gaps = 17/299 (5%)
Query: 31 NQMSLDNPDEESEAETTESK--AEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELEL 88
NQ+ NP ES+A E K E S++ +++LL + I L L+EL+L
Sbjct: 107 NQLKF-NPRIESKATPPEIKDNQPPESSQDETPDQILL-----EVIAPFGHLEGLEELDL 160
Query: 89 YDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLK- 147
YDNQ+ IE L+ L NL+ LD SFN IR I+ LD L +L LYL NKIS+IE +D+L
Sbjct: 161 YDNQIAKIEGLENLHNLKTLDFSFNLIRRIENLDSLRSLTTLYLIQNKISQIEALDNLAN 220
Query: 148 KLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIE 207
L LELG N+IR I NL LTNL EL+LG+NKIS+++ L +L L LS+Q NR+ +E
Sbjct: 221 TLTSLELGSNRIRQITNLACLTNLTELWLGRNKISKLEGLDALVNLRSLSIQSNRIVKLE 280
Query: 208 NLEALTNLTQLYLSENGLTTI-ENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWIND 266
LE L L +LY+S NGLT+I E L +N+KL LDV N+I+ + I L++L+E W N+
Sbjct: 281 GLENLVGLEELYISHNGLTSIGEGLSTNKKLRVLDVGANEINDMSGIEGLSQLEELWANN 340
Query: 267 NQ--VSDWNTVN---VLENNKQLQTIYLDRNPVA--QDPNYRRKIKLVCPWIVQIDATL 318
N+ V+ W+ + N LQT+YL+ NP+ NYRRKI L CP ++QIDAT
Sbjct: 341 NKLTVAGWSAIEGSLSQSNMANLQTVYLEGNPLQLEMGANYRRKIMLACPQLIQIDATF 399
>gi|380494972|emb|CCF32749.1| protein phosphatase 1 regulatory subunit SDS22 [Colletotrichum
higginsianum]
Length = 383
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/259 (44%), Positives = 174/259 (67%), Gaps = 4/259 (1%)
Query: 63 RLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RL LR N I+ I+ + L +TL++L+ YDN ++ I LD L+NL LDLSFN+I+ IK +
Sbjct: 121 RLCLRQNSIQSIDGLSPLASTLEDLDFYDNLISHIRGLDDLVNLTSLDLSFNKIKHIKRV 180
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
+HL L++L+L +NKIS IEN++ L L LELG N+IR+++NLD L NLEEL++ KNKI
Sbjct: 181 NHLTKLKELFLVANKISTIENLEGLDNLTSLELGSNRIRVLQNLDSLKNLEELWVAKNKI 240
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + L L+ L ILS+Q NR+R + L + +L +LY+S N LT++ + NEKL +D
Sbjct: 241 TELTGLGGLSNLRILSIQSNRIRDLAPLADVPSLEELYMSHNALTSLAGIERNEKLRVVD 300
Query: 242 VAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QDPN 299
++ N ++ I+ + L L+E W + NQ++D+N V L + + L T+Y + NP+ + P
Sbjct: 301 ISNNAVTSIKGLGPLKNLEELWASYNQIADFNEVEKELRDKEHLTTVYFEGNPLQLRGPA 360
Query: 300 -YRRKIKLVCPWIVQIDAT 317
YR K++L P + QIDAT
Sbjct: 361 VYRNKVRLALPQLSQIDAT 379
>gi|115388591|ref|XP_001211801.1| protein phosphatases PP1 regulatory subunit sds22 [Aspergillus
terreus NIH2624]
gi|114195885|gb|EAU37585.1| protein phosphatases PP1 regulatory subunit sds22 [Aspergillus
terreus NIH2624]
Length = 457
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/260 (46%), Positives = 174/260 (66%), Gaps = 4/260 (1%)
Query: 62 ERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+RL LR N I +IE + +L EL+LYDN ++ I+ LD NL LDLSFN+I+ IK
Sbjct: 194 QRLCLRQNQITRIEFPASVAASLTELDLYDNLISHIKGLDEFRNLTSLDLSFNKIKHIKN 253
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ HL L LY NKISKIE ++ L L+ LELG N+IR IENLD LT+LEEL+LGKNK
Sbjct: 254 VAHLVKLTDLYFVQNKISKIEGLEGLSALRNLELGANRIREIENLDTLTSLEELWLGKNK 313
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + NL L L ILS+Q NRL ++ + +L NL +LYLS N ++ + L SN L L
Sbjct: 314 ITELKNLDGLQNLRILSIQSNRLTSLTGVSSLRNLEELYLSHNLISDLSGLESNTSLRVL 373
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQDP 298
D + N++S ++++ LT L+E W ++NQ+S ++ V L++ K+L+T+Y + NP+ + P
Sbjct: 374 DFSNNQVSKLEHLGTLTNLEELWASNNQLSSFDEVERELKDKKELKTVYFEGNPLQTKGP 433
Query: 299 N-YRRKIKLVCPWIVQIDAT 317
YR K++L P I+QIDAT
Sbjct: 434 AVYRNKVRLALPQIMQIDAT 453
>gi|350296281|gb|EGZ77258.1| protein phosphatases PP1 regulatory subunit sds22 [Neurospora
tetrasperma FGSC 2509]
Length = 374
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/321 (41%), Positives = 195/321 (60%), Gaps = 18/321 (5%)
Query: 4 ETVPNTDEVDNDNLVTLNVEAVENTHGNQMSLDNPDEESEAETTE-SKAEDEESKEVCIE 62
E + + + D+DN+V G +++ D + E E+ S E K+V
Sbjct: 63 EALSDPEYSDDDNIVP----------GEEVAADEGKQFDENESVSISALRLERFKQVA-- 110
Query: 63 RLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIREIKG 120
R+ LR NLI+ IE + + TL++L+LYDN ++ I L L NL LDLSFN+I+ IK
Sbjct: 111 RICLRQNLIQDIEGLAAVAETLQDLDLYDNLISHIGRGLTDLTNLTSLDLSFNKIKHIKH 170
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
++HL NL L+ SNKIS+IE ++ L KL+ LELG N+IR ++NLD L NLEEL++ KNK
Sbjct: 171 INHLTNLTDLFFVSNKISRIEGLEGLDKLRNLELGSNRIRELQNLDSLKNLEELWVAKNK 230
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + L LTKL +LS+Q NR+R + L + L +LY+S N L ++E L +N KL L
Sbjct: 231 ITELTGLGGLTKLRLLSIQSNRIRDLSPLREVPQLEELYISHNALESLEGLENNTKLRVL 290
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QDP 298
D++ NKI+ ++ I L EL+E W + N V D+ V L+ K L T+Y + NP+ + P
Sbjct: 291 DISNNKIASLKGIGPLAELEELWASYNMVGDFAEVERELKEKKNLTTVYFEGNPLQLRAP 350
Query: 299 N-YRRKIKLVCPWIVQIDATL 318
YR K++L P + QIDAT
Sbjct: 351 ALYRNKVRLALPQVQQIDATF 371
>gi|320033516|gb|EFW15464.1| protein phosphatase PP1 regulatory subunit sds22 [Coccidioides
posadasii str. Silveira]
Length = 344
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/261 (47%), Positives = 175/261 (67%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+E+L LR N I ++ L TLK+L+LYDN ++ I+ LD L NL LDLSFN I+ IK
Sbjct: 79 LEKLCLRQNQIPRMSFPDNLGPTLKDLDLYDNLISHIKGLDQLTNLTSLDLSFNNIKHIK 138
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L L LY N+I KIE ++ L KL+ LELG N+IR IENLD LT+LEEL+LGKN
Sbjct: 139 NLSKLVQLTDLYFVQNRIQKIEGLEGLTKLRNLELGANRIREIENLDDLTSLEELWLGKN 198
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ I N++ L+ L ILSL NRL ++ L LT+L +LY+S N +T I L S L
Sbjct: 199 KITEIKNISHLSNLKILSLPSNRLTSLSGLSGLTSLEELYVSHNAITHISGLESLNNLHV 258
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQD 297
LD++ N+IS ++NI+HL+ ++E W ++N+++ ++ V L N ++L+T+Y + NP+ +
Sbjct: 259 LDISNNQISTLENISHLSHIEELWASNNKLASFDEVERELRNKEELKTVYFEGNPLQTRG 318
Query: 298 PN-YRRKIKLVCPWIVQIDAT 317
P YR K++L P I QIDAT
Sbjct: 319 PALYRNKVRLALPQIQQIDAT 339
>gi|156054124|ref|XP_001592988.1| hypothetical protein SS1G_05910 [Sclerotinia sclerotiorum 1980]
gi|154703690|gb|EDO03429.1| hypothetical protein SS1G_05910 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 382
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/267 (44%), Positives = 179/267 (67%), Gaps = 4/267 (1%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNR 114
S+ ++RL LR N I IE + L +TL EL+LYDN + I L+ LI+L LDLSFN+
Sbjct: 109 SRFSQVQRLCLRQNTITTIEELSSLASTLTELDLYDNLIAHIRGLEDLIHLTSLDLSFNK 168
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
++ IK ++HL +L LY NKI+ IEN++ L KL+ LEL N+IR I+ L+ L LEEL
Sbjct: 169 LKHIKKINHLTSLTDLYFVQNKITTIENLEGLTKLRNLELAANRIREIQGLETLVGLEEL 228
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LGKNKI+ + NL +L L ILS+Q NR+R+I L+ L++L +LY+S N LT++E L S+
Sbjct: 229 WLGKNKITEMKNLDALQNLKILSIQSNRIRSISGLDKLSSLEELYISHNALTSLEGLESS 288
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNP 293
+L LD++ N+IS + + L EL+E W + NQ++D+N V L + ++L T+Y + NP
Sbjct: 289 SQLRVLDISNNQISSLAGVKGLKELEEIWASYNQIADFNDVEENLRDKEKLTTVYFEGNP 348
Query: 294 VA-QDPN-YRRKIKLVCPWIVQIDATL 318
+ + P YR K++L P ++QIDA
Sbjct: 349 LQLRAPALYRNKVRLTLPQLMQIDARF 375
>gi|291222317|ref|XP_002731164.1| PREDICTED: protein phosphatase-1 regulatory subunit 7-like
[Saccoglossus kowalevskii]
Length = 293
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/303 (45%), Positives = 186/303 (61%), Gaps = 37/303 (12%)
Query: 23 EAVENTHGNQM---SLDNPDEESEAETTESKAEDEESKEVC--IERLLLRWNLIKKIENI 77
E G Q+ SLD PD ++ + S+ E +V +E L R NL+ KIEN+
Sbjct: 21 EPTNREEGQQLDVISLD-PDA-TDVDLNHSRISKIEHMDVLEKVETLCFRQNLLTKIENL 78
Query: 78 HMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNK 136
L T+ +L+LYDNQ+T IENL+ L L ILDLSFNRIR I+ L+ L L +L+L N+
Sbjct: 79 SCLKDTITDLDLYDNQITKIENLEALTKLTILDLSFNRIRNIENLETLTGLTRLFLVQNR 138
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
I KIEN+ HL L +LELG N+IR +ENLD L NL+ L++G+NKI++++NL L KL L
Sbjct: 139 IRKIENIGHLVNLTMLELGSNQIRKLENLDSLVNLDSLFIGRNKITQLENLGKLKKLTTL 198
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
S+Q NR+ +E LE L NL QLY+S+NG+ +ENL N
Sbjct: 199 SIQSNRIIKLEGLEELENLEQLYISDNGIQKLENLDKN---------------------- 236
Query: 257 TELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
NDN++S W+ ++ L N K L+T+YL+RNP+ +DP YRRKIKL PW+ QIDA
Sbjct: 237 -------CNDNKISKWSDIDQLRNAKNLETVYLERNPIHKDPAYRRKIKLSLPWVHQIDA 289
Query: 317 TLA 319
TL
Sbjct: 290 TLC 292
>gi|429860133|gb|ELA34881.1| protein phosphatase pp1 regulatory subunit [Colletotrichum
gloeosporioides Nara gc5]
Length = 393
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/260 (43%), Positives = 174/260 (66%), Gaps = 4/260 (1%)
Query: 63 RLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RL LR N I+ I+ + L TL++L+ YDN ++ I L+ L +L LDLSFN+I+ IK +
Sbjct: 131 RLCLRQNSIQDIDGLSALAPTLEDLDFYDNLISHIRGLEDLTSLTSLDLSFNKIKHIKRV 190
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
+HL L++L+L +NK+ IEN+D L L LELG N+IR+++NLD L NLEEL++ KNKI
Sbjct: 191 NHLTKLKELFLVANKVGTIENLDGLVNLTSLELGSNRIRVLQNLDSLKNLEELWVAKNKI 250
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + L L L +LS+Q NR+R + L+ + +L +LY+S N LT++E + NEKL LD
Sbjct: 251 TELTGLGGLPNLRLLSIQSNRIRDLSPLKDVPSLEELYISHNALTSLEGIEQNEKLRVLD 310
Query: 242 VAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QDPN 299
++ N ++ ++ + L L+EFW + NQ+SD+N V L++ + L T+Y + NP+ + P
Sbjct: 311 ISNNAVASVKGLKPLKNLEEFWASYNQISDFNEVEKELKDKEHLTTVYFEGNPLQLRGPA 370
Query: 300 -YRRKIKLVCPWIVQIDATL 318
YR K++L P + QIDAT
Sbjct: 371 VYRNKVRLALPQLSQIDATF 390
>gi|388852702|emb|CCF53620.1| probable SDS22-protein phosphatase 1, regulatory subunit 7
[Ustilago hordei]
Length = 422
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/269 (44%), Positives = 171/269 (63%), Gaps = 11/269 (4%)
Query: 61 IERLLLRWNLIKKI--ENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
++RL LR NL+ KI ++I +LT L+ L+LYDN L + LD L LE LDLSFN I I
Sbjct: 152 LKRLCLRQNLLTKIRSKDIGLLTELEALDLYDNSLEKVSGLDELKKLESLDLSFNNIHHI 211
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDH----LKKLKVLELGDNKIRIIENLDGLTNLEEL 174
+ HL ++L+ NKIS++ D L+ LELG N++R IEN+ L NL +L
Sbjct: 212 SNVSHLGQCKELFFVQNKISRVRPDDLDGAIAGSLQSLELGGNRLRAIENIGHLANLTKL 271
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LGKNKI + L+SLT L +LS+Q NR+ +E LE L NL +LY+S NGLT +E L N
Sbjct: 272 WLGKNKIISLHGLSSLTNLKVLSIQSNRITKLEGLEQLVNLEELYISHNGLTKLEGLERN 331
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN--VLENN-KQLQTIYLDR 291
KL LDV N I ++N+ HL +++EFW NDN+++D N ++ + E +L+T+YL+
Sbjct: 332 TKLTVLDVGGNMIEKVENVRHLEKMEEFWANDNKIADINGLDQELGEGRMPRLETVYLEG 391
Query: 292 NPV--AQDPNYRRKIKLVCPWIVQIDATL 318
NP + YRRK+ L+ P + QIDAT
Sbjct: 392 NPGMRKEGAAYRRKVMLMLPQVRQIDATF 420
>gi|310789873|gb|EFQ25406.1| protein phosphatase 1 regulatory subunit SDS22 [Glomerella
graminicola M1.001]
Length = 390
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/259 (43%), Positives = 174/259 (67%), Gaps = 4/259 (1%)
Query: 63 RLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RL LR N I+ IE + + +TL++L+ YDN ++ I LD LINL LDLSFN+I+ IK +
Sbjct: 127 RLCLRQNSIQSIEGLSPIASTLEDLDFYDNLISHIRGLDDLINLTSLDLSFNKIKHIKRV 186
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
+HL L++L+L +NKIS IEN++ L L LELG N+IR+++NLD L NLEEL++ KNKI
Sbjct: 187 NHLTKLKELFLVANKISTIENLEGLDNLTSLELGSNRIRVLQNLDSLKNLEELWVAKNKI 246
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + L L+ L +LS+Q NR+R + L + +L +LY+S N LT++ + NEKL +D
Sbjct: 247 TELTGLGGLSNLRLLSIQSNRIRDLAPLADVPSLEELYISHNALTSLAGIERNEKLRVVD 306
Query: 242 VAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QDPN 299
++ N ++ ++ + L L+E W + NQ++D+N V L + + L T+Y + NP+ + P
Sbjct: 307 ISNNAVTSVKGLGPLKNLEELWASYNQIADFNEVEKELRDKEHLTTVYFEGNPLQLRGPA 366
Query: 300 -YRRKIKLVCPWIVQIDAT 317
YR K++L P + QIDAT
Sbjct: 367 VYRNKVRLALPQLSQIDAT 385
>gi|71005916|ref|XP_757624.1| hypothetical protein UM01477.1 [Ustilago maydis 521]
gi|46097011|gb|EAK82244.1| hypothetical protein UM01477.1 [Ustilago maydis 521]
Length = 1744
Score = 211 bits (536), Expect = 5e-52, Method: Composition-based stats.
Identities = 114/242 (47%), Positives = 156/242 (64%), Gaps = 9/242 (3%)
Query: 61 IERLLLRWNLIKKI--ENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
++RL LR NL+ KI ++I +LT L++L+LYDN + I LD L LE LDLSFN I I
Sbjct: 656 LKRLCLRQNLLTKIRSKDIGILTELQDLDLYDNSIEKISGLDELTKLESLDLSFNNIHHI 715
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDH----LKKLKVLELGDNKIRIIENLDGLTNLEEL 174
+ HL + +Y NKIS++ D L+ LELG N++R IEN LTNL +L
Sbjct: 716 SNISHLGQCKTIYFVQNKISRVRPDDFQGPIASSLQSLELGGNRLRTIENFAHLTNLTQL 775
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LGKNKI+ + L +LT L +LS+Q NR+ +E LE L NL +LY+S NGLT +E L N
Sbjct: 776 WLGKNKITSLQGLETLTNLRVLSIQSNRITKLEGLEKLVNLQELYISHNGLTKLEGLQHN 835
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQ--LQTIYLDR 291
KL TLDV N I ++N+ HL+ LQEFW NDN+++D N ++ L K L+T+YL+
Sbjct: 836 VKLTTLDVGANMIEKVENVGHLSLLQEFWANDNKITDLNGLDKELGETKMPALETVYLEG 895
Query: 292 NP 293
NP
Sbjct: 896 NP 897
>gi|340518165|gb|EGR48407.1| predicted protein [Trichoderma reesei QM6a]
Length = 392
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 178/261 (68%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ R+ LR NLI+ IE++ L TL+EL+LYDN ++ I LD L L LDLSFN+I+ IK
Sbjct: 115 VARICLRQNLIQDIESLDSLADTLEELDLYDNLISHIRGLDNLTKLTSLDLSFNKIKHIK 174
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
++HL NL++++L +NKISKIE ++ L KLK LELG N+IR I+NLD L NLEEL+L KN
Sbjct: 175 HINHLKNLKEIFLVANKISKIEGLEGLDKLKSLELGSNRIREIQNLDSLKNLEELWLAKN 234
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + L L KL +LS+Q NR+R + L+ + L +LY++ N L ++E + +N L+
Sbjct: 235 KITELTGLGGLPKLRLLSIQSNRIRDLSPLKEVPQLEELYIAHNALESLEGIENNTNLKI 294
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QD 297
L+++ N+IS ++ + L +L+E W + NQ+ D+ V L++ + L T+Y + NP+ +
Sbjct: 295 LEISNNQISSLKGVGPLKDLEELWASYNQLGDFAEVERELKDKEDLTTVYFEGNPLQLRG 354
Query: 298 PN-YRRKIKLVCPWIVQIDAT 317
P YR K++L P + QIDA+
Sbjct: 355 PALYRNKVRLALPQVKQIDAS 375
>gi|358372080|dbj|GAA88685.1| hypothetical protein AKAW_06799 [Aspergillus kawachii IFO 4308]
Length = 376
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 171/261 (65%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++RL R N I +IE + +L EL+LYDN ++ ++ LD NL LDLSFN+I+ +K
Sbjct: 111 VKRLCFRQNQITRIEFPTEVAKSLTELDLYDNLISHVKGLDEFENLTSLDLSFNKIKHVK 170
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL L LY NKISKIE V+ L L+ LELG N+IR IENLD L LEEL+LGKN
Sbjct: 171 NISHLVKLTDLYFVQNKISKIEGVETLTSLRNLELGANRIREIENLDNLKALEELWLGKN 230
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + NL L+ L ILS+Q NRL +I L L NL +LY+S N +T + L N L
Sbjct: 231 KITELKNLDGLSNLRILSIQSNRLTSISGLSNLKNLEELYVSHNAITDLSGLEENTSLRV 290
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQD 297
LD + N++S +++++HL L+E W ++NQ+S ++ V L + ++LQT+Y + NP+ +
Sbjct: 291 LDFSNNQVSKLEHVSHLKNLEELWASNNQLSSFDEVERELRDKEKLQTVYFEGNPLQTRA 350
Query: 298 PN-YRRKIKLVCPWIVQIDAT 317
P YR K++L P I+Q+DAT
Sbjct: 351 PALYRNKVRLAIPHIMQVDAT 371
>gi|358381521|gb|EHK19196.1| hypothetical protein TRIVIDRAFT_90324 [Trichoderma virens Gv29-8]
Length = 379
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 115/262 (43%), Positives = 178/262 (67%), Gaps = 4/262 (1%)
Query: 61 IERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ R+ LR N+I+ IE++ L +TL+EL+LYDN ++ I LD L L LDLSFN+I+ IK
Sbjct: 115 VTRICLRQNVIQDIESLDSLASTLEELDLYDNLISHIRGLDGLTKLTSLDLSFNKIKHIK 174
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+DHL +L++++L +NKISKIE ++ L KL+ LELG N+IR I+NLD L NLEEL+L KN
Sbjct: 175 HIDHLKDLKEIFLVANKISKIEGLEGLDKLRSLELGSNRIREIQNLDSLKNLEELWLAKN 234
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + L L KL +LS+Q NR+R + L+ + L +LY++ N L ++E + +N L+
Sbjct: 235 KITELTGLGGLPKLRLLSIQSNRIRDLSPLKEVPGLEELYIAHNALESLEGIENNTNLKI 294
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QD 297
L+++ N+IS ++ + L L+E W + NQ+ D+ V L++ + L T+Y + NP+ +
Sbjct: 295 LEISNNQISSLKGVGPLENLEELWASYNQLGDFAEVEKELKDKEDLTTVYFEGNPLQLRG 354
Query: 298 PN-YRRKIKLVCPWIVQIDATL 318
P YR K++L P + QIDAT
Sbjct: 355 PALYRNKVRLALPQVKQIDATF 376
>gi|238486460|ref|XP_002374468.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Aspergillus flavus NRRL3357]
gi|220699347|gb|EED55686.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Aspergillus flavus NRRL3357]
Length = 395
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 119/261 (45%), Positives = 177/261 (67%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++R+ LR N I +I + +L EL+LYDN ++ ++ LD +L LDLSFN+I+ IK
Sbjct: 79 VQRICLRQNQITRIAFPPEIAGSLVELDLYDNLISHVKGLDEFKDLTSLDLSFNKIKHIK 138
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL L LY NKISKIE ++ LK L+ LELG N+IR IENL+ LT+LEEL+LGKN
Sbjct: 139 NISHLVKLTDLYFVQNKISKIEGLEGLKVLRNLELGANRIREIENLESLTSLEELWLGKN 198
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ NL +L L ILS+Q NRL ++ L +L NL +LY+S N +T + L SN KL
Sbjct: 199 KITEFKNLDALQNLKILSIQSNRLTSLNGLSSLKNLEELYVSHNAITELSGLESNTKLRV 258
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQD 297
LD + N++S +++++HL L+E W ++NQ+S ++ V L++ ++LQT+Y + NP+ +
Sbjct: 259 LDFSNNQVSKLEHLSHLENLEELWGSNNQLSSFDEVEKELKDKEKLQTVYFEGNPLQTKG 318
Query: 298 PN-YRRKIKLVCPWIVQIDAT 317
P YR K++L P I+QIDA+
Sbjct: 319 PAVYRNKVRLAIPHIMQIDAS 339
>gi|116182386|ref|XP_001221042.1| hypothetical protein CHGG_01821 [Chaetomium globosum CBS 148.51]
gi|88186118|gb|EAQ93586.1| hypothetical protein CHGG_01821 [Chaetomium globosum CBS 148.51]
Length = 378
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 115/262 (43%), Positives = 170/262 (64%), Gaps = 4/262 (1%)
Query: 61 IERLLLRWNLIKKIENIH-MLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ R+ LR NLI+ IE + + +TL +L+LYDN ++ I LD LINL LDLSFN+I+ IK
Sbjct: 114 VARICLRQNLIQNIEGVSGIASTLNDLDLYDNLISHIRGLDDLINLTSLDLSFNKIKHIK 173
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL NL LY +NKISKIE ++ L KL+ LELG N+IR ++NLD LT LEEL++ KN
Sbjct: 174 HISHLTNLTDLYFVANKISKIEGLEGLTKLRNLELGSNRIRELQNLDSLTALEELWVAKN 233
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + L+ L L +LS+Q NR+R + L + L +LY+S N L ++ L N +L
Sbjct: 234 KITSLTGLSGLPNLRLLSVQSNRIRDLSPLRDVPQLEELYISHNALESLTGLEHNTQLRV 293
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVA-QD 297
+DV++N+I+ + + L L+E W + NQV+D+ V L + L T+Y + NP+ +
Sbjct: 294 IDVSHNQIASLAGLGPLAALEELWASYNQVADFADVERHLADKPALSTVYFEGNPLQLRG 353
Query: 298 PN-YRRKIKLVCPWIVQIDATL 318
P YR K++L P + Q+DAT
Sbjct: 354 PAVYRNKVRLALPQVRQVDATF 375
>gi|169619437|ref|XP_001803131.1| hypothetical protein SNOG_12914 [Phaeosphaeria nodorum SN15]
gi|160703823|gb|EAT79714.2| hypothetical protein SNOG_12914 [Phaeosphaeria nodorum SN15]
Length = 377
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 126/290 (43%), Positives = 183/290 (63%), Gaps = 8/290 (2%)
Query: 36 DNPDEESEAETTESKAEDEES----KEVCIERLLLRWNLIKKIE-NIHMLTTLKELELYD 90
D P++E E E K D S + ++RL LR N I+ I+ + +L E++ YD
Sbjct: 85 DTPEDEEEIELVHCKIADMASLRLERFKQMKRLCLRQNKIEAIDIPAALAPSLTEIDFYD 144
Query: 91 NQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLK 150
N + I+ LD NL LDLSFN+I+ IK L HL L+ LY NKIS IEN++ L L+
Sbjct: 145 NLIAHIKGLDAFTNLVSLDLSFNKIKHIKRLAHLTKLKDLYFVQNKISVIENLEGLTNLR 204
Query: 151 VLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLE 210
+ELG N+IR I L+ LTNLEEL+LGKNKI+ I L++LT L ILS+Q NRLR+I NL
Sbjct: 205 QIELGANRIREITGLETLTNLEELWLGKNKITEIGGLSTLTNLKILSIQSNRLRSITNLS 264
Query: 211 ALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
+LT+L +L++S N LT++ L N+ L +D++ N I + + LT L EFW ++ +++
Sbjct: 265 SLTSLEELHISHNLLTSLSGLSENKNLRVIDISANPIEHLSGLDGLTHLTEFWASNCKLA 324
Query: 271 DWNTVNV-LENNKQLQTIYLDRNPVA-QDPN-YRRKIKLVCPWIVQIDAT 317
+ V L + ++L+T+Y + NP+ Q P YR K++L P IVQIDA+
Sbjct: 325 SFQEVEKELGDKEELETVYFEGNPLQRQQPALYRNKVRLALPRIVQIDAS 374
>gi|336464198|gb|EGO52438.1| protein phosphatases PP1 regulatory subunit sds22 [Neurospora
tetrasperma FGSC 2508]
Length = 374
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/263 (45%), Positives = 172/263 (65%), Gaps = 5/263 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIREI 118
+ R+ LR NLI+ IE + + TL++L+LYDN ++ I L L NL LDLSFN+I+ I
Sbjct: 109 VARICLRQNLIQDIEGLAAVAETLQDLDLYDNLISHIGRGLTDLTNLTSLDLSFNKIKHI 168
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
K ++HL NL L+ SNKIS+IE ++ L KL+ LELG N+IR ++NLD L NLEEL++ K
Sbjct: 169 KHINHLTNLTDLFFVSNKISRIEGLEGLDKLRNLELGSNRIRKLQNLDSLKNLEELWVAK 228
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
NKI+ + L L KL +LS+Q NR+R + L + L +LY+S N L ++E L +N KL
Sbjct: 229 NKITELTGLGGLPKLRLLSIQSNRIRDLSPLREVPQLEELYISHNALESLEGLENNTKLR 288
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-Q 296
LD++ NKI+ ++ I L EL+E W + N V D+ V L++ K L T+Y + NP+ +
Sbjct: 289 VLDISNNKIASLKGIGPLAELEELWASYNMVGDFAEVERELKDKKNLTTVYFEGNPLQLR 348
Query: 297 DPN-YRRKIKLVCPWIVQIDATL 318
P YR K++L P + QIDAT
Sbjct: 349 APALYRNKVRLALPQVQQIDATF 371
>gi|403365288|gb|EJY82424.1| Protein phosphatase 1 regulatory subunit, putative [Oxytricha
trifallax]
Length = 408
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/264 (45%), Positives = 171/264 (64%), Gaps = 2/264 (0%)
Query: 55 ESKEVC--IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSF 112
E+ E C + +L LR NLIKKIE + L LELYDN++ VIEN+ L NL +LD+SF
Sbjct: 100 ENLEKCHNLTKLGLRKNLIKKIEGLDNNILLTHLELYDNRIKVIENISHLTNLVMLDISF 159
Query: 113 NRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLE 172
NRI I G++ L N++KL+L SN+ISKIE +D L L L+LGDNKIR +ENLD LT L
Sbjct: 160 NRITRISGIETLVNVKKLFLASNRISKIEGLDSLINLTSLDLGDNKIRKLENLDQLTELT 219
Query: 173 ELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLL 232
E + KN+++ I L +L LNIL+LQ N + I L+ L L ++YL +N ++ IE L
Sbjct: 220 EFFCAKNRLTEISGLENLKNLNILALQANFIEKISGLDGLEQLEEIYLQQNQISRIEGLE 279
Query: 233 SNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
+ +L TLD+AYNK+ I+ + LQE W+N NQ+ D +++ ++ ++LQTIYL N
Sbjct: 280 NLPQLNTLDIAYNKLERIEGLDSNLNLQELWLNYNQIHDHDSLEYVKKFQKLQTIYLADN 339
Query: 293 PVAQDPNYRRKIKLVCPWIVQIDA 316
P+AQ + ++ P + QID
Sbjct: 340 PIAQVTEFMENLQTALPQLQQIDG 363
>gi|296414818|ref|XP_002837094.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632944|emb|CAZ81285.1| unnamed protein product [Tuber melanosporum]
Length = 359
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/262 (45%), Positives = 175/262 (66%), Gaps = 4/262 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+++L LR N I IE + L TL +L+LYDN + I L+ L NLE LDLSFN ++ IK
Sbjct: 95 VQKLCLRQNNITDIECLSPLARTLVDLDLYDNHIAHIHGLEDLANLENLDLSFNNLKHIK 154
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HLA L+ LY N+IS+IE ++ L L+ LELG N+IR IEN+ LT L+EL+LGKN
Sbjct: 155 RISHLAKLQNLYFVQNRISRIEGLEGLAVLRNLELGANRIREIENIGHLTALQELWLGKN 214
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + NL++L L ILS+Q NRL +I L+ LT+L +LY+S N LT+I L +N+ L
Sbjct: 215 KITELKNLSTLKNLRILSIQSNRLTSITGLDELTSLEELYISHNALTSIAGLDTNKNLRV 274
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVAQD- 297
LD++ N+I+ + N+AHL L+E W ++N+++ + + L ++L T+Y + NP+ ++
Sbjct: 275 LDISNNQIAQLANLAHLPHLEELWASNNKLASFEEIEQELGGLEELVTVYFEGNPLMREA 334
Query: 298 -PNYRRKIKLVCPWIVQIDATL 318
YR KIKL P I QIDAT
Sbjct: 335 AAGYRTKIKLALPRIKQIDATF 356
>gi|358055075|dbj|GAA98844.1| hypothetical protein E5Q_05532 [Mixia osmundae IAM 14324]
Length = 1327
Score = 209 bits (531), Expect = 2e-51, Method: Composition-based stats.
Identities = 124/303 (40%), Positives = 182/303 (60%), Gaps = 20/303 (6%)
Query: 36 DNPDEESEAETTESKAEDEES----KEVCIERLLLRWNLIKKI--------ENIHMLTTL 83
D P++ E E T ++ + S + + RL LR NLI + + + L L
Sbjct: 1023 DVPEDTPELELTHARLRNIGSLRLKRFASLTRLCLRQNLIPSLVSKDGEPAQPLSALPKL 1082
Query: 84 KELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG--LDHLANLEKLYLCSNKISKIE 141
++L+LYDN++ +E LD L +L LDLSFN IREI L +Y NKI KI+
Sbjct: 1083 EDLDLYDNRIARLEGLDGLTHLTSLDLSFNLIREIPEGVFKDCKALSTVYFIQNKIGKIQ 1142
Query: 142 NVDHLK-KLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
+++ LK L LELG N++R +E LD LT L EL+LGKNKI +++NL++L+ L ILS+Q
Sbjct: 1143 HLEDLKPTLTSLELGGNRLRKLEGLDQLTQLTELWLGKNKIPKLENLSTLSHLKILSIQS 1202
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQ 260
NRL IE LE L +L +LY+S NGLTT+ L N L+TLDVA N+++ I + LT L+
Sbjct: 1203 NRLTRIEGLEMLQSLEELYISHNGLTTLAGLEKNTSLKTLDVAGNRLTDIGTVKLLTNLE 1262
Query: 261 EFWINDNQVSDWNTVNVLEN---NKQLQTIYLDRNPVAQD--PNYRRKIKLVCPWIVQID 315
E W NDN+++D+ + + + + L T+Y + NP + YRRK+ L+ P + Q+D
Sbjct: 1263 ELWANDNKLADFQALEEVLSASVHPALDTVYFEGNPFQRTLGTTYRRKLMLMLPHLKQLD 1322
Query: 316 ATL 318
AT
Sbjct: 1323 ATF 1325
>gi|403417606|emb|CCM04306.1| predicted protein [Fibroporia radiculosa]
Length = 372
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/265 (46%), Positives = 176/265 (66%), Gaps = 8/265 (3%)
Query: 61 IERLLLRWNLIKKI--ENIHMLTTLKELELYDNQL-TVIENLDTLINLEILDLSFNRIRE 117
+++L LR N I + E + L L+EL+LYDN++ TV E L L L +LDLSFN +R
Sbjct: 98 LKKLCLRQNYISVLDPEVMKALAGLEELDLYDNKVKTVDEALSGLSKLTVLDLSFNLLRR 157
Query: 118 IKG-LDHLANLEKLYLCSNKISKIENVDHLKK-LKVLELGDNKIRIIENLDGLTNLEELY 175
+ L +L L+ +Y NKIS+I +D + L+ LELG N++R IENLD L NL+EL+
Sbjct: 158 VPDTLHYLRALDTVYFVQNKISQISGLDSVGTTLRSLELGGNRLRRIENLDALVNLQELW 217
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LGKNKI +++NL SL +L ILS+Q NR+ +E LE L +L +LYLS NG+ +E L N
Sbjct: 218 LGKNKIVKLENLGSLKRLKILSIQSNRITKLEGLEGLDDLEELYLSHNGIERLEGLEKNT 277
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV 294
KL LDV N + ++N++H T L E WINDN++ +T+ L++ + L+TIYL+RNPV
Sbjct: 278 KLRVLDVGNNFVKALENLSHSTTLGELWINDNRIDTLDTLEPQLKHVETLRTIYLERNPV 337
Query: 295 --AQDPNYRRKIKLVCPWIVQIDAT 317
++ NYRRK+ L P + Q+DAT
Sbjct: 338 QASEGVNYRRKVMLALPQVEQLDAT 362
>gi|367052127|ref|XP_003656442.1| hypothetical protein THITE_2121066 [Thielavia terrestris NRRL 8126]
gi|347003707|gb|AEO70106.1| hypothetical protein THITE_2121066 [Thielavia terrestris NRRL 8126]
Length = 379
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 173/262 (66%), Gaps = 4/262 (1%)
Query: 61 IERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ R+ LR NLI+ IE L +TL +L+LYDN ++ + LD L+NL LDLSFN+I+ IK
Sbjct: 114 VARICLRQNLIQDIEGFSCLASTLHDLDLYDNLISHVRGLDDLVNLRSLDLSFNKIKHIK 173
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL NL LYL +NKISKIE + L KL+ LELG N+IR ++NLD LT LEEL++ KN
Sbjct: 174 HISHLTNLTDLYLVANKISKIEGLSGLTKLRNLELGSNRIRELQNLDCLTALEELWVAKN 233
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + LA L +L +LS+Q NR+R + L+ + L +LY+S N L T+E L N +L
Sbjct: 234 KITSLAGLAGLPRLRLLSIQSNRIRDLSPLKDVPQLEELYISHNALETLEGLEHNTRLRV 293
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QD 297
L+V+ NKI+ ++ + L EL+E W + N ++D+ + L + L T+YL+ N + +
Sbjct: 294 LEVSNNKIASLKGLGPLAELEELWASYNLIADFGELERELRDKTALTTVYLEGNLLQLRA 353
Query: 298 PN-YRRKIKLVCPWIVQIDATL 318
P YR K++L P + QIDAT+
Sbjct: 354 PALYRNKVRLALPQVQQIDATM 375
>gi|392594656|gb|EIW83980.1| L domain-like protein [Coniophora puteana RWD-64-598 SS2]
Length = 360
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/297 (44%), Positives = 190/297 (63%), Gaps = 13/297 (4%)
Query: 36 DNPDEESEAETTESKAEDE-----ESKEVCIERLLLRWNLIKKIE--NIHMLTTLKELEL 88
D PD+ E E S+ E +++L LR N I +++ +LT L+EL+L
Sbjct: 61 DFPDDTEELELVHSRISSLNHLRLERFAKHLKKLCLRQNQISELDPATFSLLTELEELDL 120
Query: 89 YDNQLT-VIENLDTLINLEILDLSFNRIREIK-GLDHLANLEKLYLCSNKISKIENVDHL 146
YDN++ V + +D L L +LDLSFN IR++ GL L++L ++ NKISKI +D +
Sbjct: 121 YDNKVKHVGQAIDKLSKLSVLDLSFNLIRQVPDGLSSLSSLHTVFFVQNKISKISGLDSV 180
Query: 147 KK-LKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRT 205
+ L+ LELG N+IR IENLD L NLEEL+LGKNKI+++ NL+SL L ILS+Q NR++
Sbjct: 181 GRTLRSLELGGNRIRFIENLDSLVNLEELWLGKNKITKLQNLSSLKSLKILSIQSNRIKK 240
Query: 206 IENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWIN 265
IE L+ L+NL +LYLS NG+ +E L +N +L TLDV N I I+N++HLT L+E W+N
Sbjct: 241 IEGLDGLSNLQELYLSHNGVERLEGLDNNPQLRTLDVGNNFIPEIENVSHLTSLEELWLN 300
Query: 266 DNQVSDWNTVNV-LENNKQLQTIYLDRNPVAQD--PNYRRKIKLVCPWIVQIDATLA 319
+N++ + L+ + L+TIYL+ NP Q YRRKI + P + QIDAT A
Sbjct: 301 NNKIDSLQALEPQLKKTETLETIYLEGNPCQQTERAAYRRKIIIALPQVTQIDATFA 357
>gi|452000654|gb|EMD93115.1| hypothetical protein COCHEDRAFT_1172996 [Cochliobolus
heterostrophus C5]
Length = 382
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 179/291 (61%), Gaps = 8/291 (2%)
Query: 36 DNPDEESEAETTESKAEDEES----KEVCIERLLLRWNLIKKIE-NIHMLTTLKELELYD 90
D PD+E E E K D S + ++RL LR N I+ I + ++L E++LYD
Sbjct: 88 DVPDDEEEIELVHCKVSDMSSLRLERFKQMKRLCLRQNRIESIAIPEELASSLTEVDLYD 147
Query: 91 NQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLK 150
N + I+ LD L LDLSFN+I+ IK L+H+ L+ LY NKI IEN++ L L+
Sbjct: 148 NLIAHIKGLDAFTELTSLDLSFNKIKHIKRLNHMTKLKDLYFVQNKIGTIENLEGLTNLR 207
Query: 151 VLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLE 210
+ELG N++R I+ L+ LT LEEL+LGKNKI+ I L +LT L ILS+Q NRLR+I LE
Sbjct: 208 QIELGANRVREIQGLETLTGLEELWLGKNKITEIKGLDTLTNLKILSIQSNRLRSITGLE 267
Query: 211 ALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
L NL +L++S N LT I L +N L +D++ N I + + L L EFW ++ ++S
Sbjct: 268 KLVNLEELHVSHNLLTEISGLENNVNLSVIDISANPIEHLGGLKGLKHLTEFWASNCKLS 327
Query: 271 DWNTV-NVLENNKQLQTIYLDRNPV--AQDPNYRRKIKLVCPWIVQIDATL 318
D+ + L + ++L+T+Y + NP+ AQ YR KI+L P +VQIDAT
Sbjct: 328 DFGEIEQELRDKEELETVYFEGNPLQRAQPALYRNKIRLALPQVVQIDATF 378
>gi|167517173|ref|XP_001742927.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778026|gb|EDQ91641.1| predicted protein [Monosiga brevicollis MX1]
Length = 261
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/256 (44%), Positives = 163/256 (63%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+ LR N I+ IE + L L LE+ DN L +E +++ +L LD+S+N IR I+ L+
Sbjct: 1 ICLRQNYIEAIEGLEDLKALTSLEMRDNMLETMEGVESCTSLTDLDVSYNGIRRIEHLEA 60
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L +L +L+L +NKI I NV+HL L +LELG N++R I+NL GL+NLEELYLGKNK++
Sbjct: 61 LTDLRRLFLANNKIKTIRNVNHLSNLVMLELGANRLRTIDNLQGLSNLEELYLGKNKLTD 120
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ L L KL ILS+Q NRL ++E +EA+ L +LY S N + I L LE +DV+
Sbjct: 121 LTGLEGLPKLRILSIQSNRLTSLEGIEAVPTLQELYASHNAIEDISLLNKLPHLEIVDVS 180
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRK 303
N+I + + L+EFW + NQV+ W V+ L KQL +Y + NP+A++ YR+K
Sbjct: 181 GNRIQNLVDFEGCANLREFWASSNQVAGWREVDKLRACKQLTCVYFEMNPIAKETMYRKK 240
Query: 304 IKLVCPWIVQIDATLA 319
+ L P + QIDATL
Sbjct: 241 MMLALPNLTQIDATLC 256
>gi|260949405|ref|XP_002618999.1| hypothetical protein CLUG_00158 [Clavispora lusitaniae ATCC 42720]
gi|238846571|gb|EEQ36035.1| hypothetical protein CLUG_00158 [Clavispora lusitaniae ATCC 42720]
Length = 367
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/265 (47%), Positives = 180/265 (67%), Gaps = 8/265 (3%)
Query: 61 IERLLLRWNLIKKIENIHMLT--TLKELELYDNQLTVIEN-LDTLINLEILDLSFNRIRE 117
+E L LR NL+ I +I L T++E++LYDN++ I + ++ +NL LD SFNRI+
Sbjct: 99 LESLCLRQNLLTSISSIGDLPVETMEEIDLYDNRINHISSSVNKFVNLTSLDFSFNRIKN 158
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIR-IIENLDGLTNLEELYL 176
IK +D L LE LY NKI +I+N++ LK LK LELG NKI I E + L +LE+L+L
Sbjct: 159 IKNIDKLVKLENLYFVQNKIKEIKNLETLKNLKNLELGGNKIEEISETMHALPSLEQLWL 218
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEK 236
GKN+IS+ NL+SL L +LS+Q NR+ IE LE L NL +LY+S NG++ IENL +N+K
Sbjct: 219 GKNRISKFQNLSSLVNLRVLSIQSNRIVKIEGLEDLVNLEELYVSHNGISKIENLDNNKK 278
Query: 237 LETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN-VLENNKQLQTIYLDRNPV- 294
L LDV N+IS ++N++HLT+L +FW + NQVS + VN L +L T+Y + NP+
Sbjct: 279 LTVLDVTSNRISKLENLSHLTKLTDFWCSYNQVSSFEEVNEQLGKLPELDTVYFEGNPLQ 338
Query: 295 AQDPN-YRRKIKL-VCPWIVQIDAT 317
+P YRRK++L + P + +IDAT
Sbjct: 339 TSNPTAYRRKLRLNLGPSLAKIDAT 363
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V + L ++ N I KIE + L L+EL + N ++ IENLD L +LD++ NRI ++
Sbjct: 233 VNLRVLSIQSNRIVKIEGLEDLVNLEELYVSHNGISKIENLDNNKKLTVLDVTSNRISKL 292
Query: 119 KGLDHLANLEKLYLCSNKISKIENV-DHLKKLKVLE 153
+ L HL L + N++S E V + L KL L+
Sbjct: 293 ENLSHLTKLTDFWCSYNQVSSFEEVNEQLGKLPELD 328
>gi|119189739|ref|XP_001245476.1| hypothetical protein CIMG_04917 [Coccidioides immitis RS]
Length = 350
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/270 (45%), Positives = 176/270 (65%), Gaps = 13/270 (4%)
Query: 61 IERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+E+L LR N I ++ L TLK+L+LYDN ++ I+ LD L NL LDLSFN I+ IK
Sbjct: 76 LEKLCLRQNQIPRMSFPDNLGPTLKDLDLYDNLISHIKGLDQLTNLTSLDLSFNNIKHIK 135
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRI---------IENLDGLTN 170
L L L LY N+I KIE ++ L KL+ LELG N+IR+ IENLD LT+
Sbjct: 136 NLSKLVQLTDLYFVQNRIQKIEGLEGLTKLRNLELGANRIRVGEHPRQKREIENLDDLTS 195
Query: 171 LEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIEN 230
LEEL+LGKNKI+ I N++ L+ L ILSL NRL ++ L LTNL +LY+S N +T I
Sbjct: 196 LEELWLGKNKITEIKNISHLSNLKILSLPSNRLTSLSGLSGLTNLEELYVSHNAITHISG 255
Query: 231 LLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYL 289
L S L LD++ N+IS ++NI+HL+ ++E W ++N+++ ++ V L N ++L+T+Y
Sbjct: 256 LESLNNLHVLDISNNQISTLENISHLSHIEELWASNNKLASFDEVERELRNKEELKTVYF 315
Query: 290 DRNPV-AQDPN-YRRKIKLVCPWIVQIDAT 317
+ NP+ + P YR K++L P I QIDAT
Sbjct: 316 EGNPLQTRGPALYRNKVRLALPQIQQIDAT 345
>gi|50546821|ref|XP_500880.1| YALI0B14355p [Yarrowia lipolytica]
gi|49646746|emb|CAG83131.1| YALI0B14355p [Yarrowia lipolytica CLIB122]
Length = 352
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/263 (43%), Positives = 172/263 (65%), Gaps = 5/263 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+E L LR N+ + + ++ TL +L++YDN++ IEN++ L+NL LD SFN+IR IK
Sbjct: 87 LETLCLRQNISPSTDGLEEVSDTLVDLDVYDNRIGKIENVNHLVNLTNLDFSFNKIRHIK 146
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ L + YLC NKI +I +D++ L LELG N+IR+IENLD L NL +L+LGKN
Sbjct: 147 NVSKLTKVINFYLCQNKIQEIRGLDNMPDLVNLELGANRIRVIENLDHLKNLRQLWLGKN 206
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI ++ L+ L L LS+Q NR+ IE LE L NL +LY+S NG+T IE L N KL T
Sbjct: 207 KIRKLSGLSGLESLETLSIQSNRITKIEGLEKLKNLEELYISHNGITKIEGLEHNTKLRT 266
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVAQD- 297
LD+ N I+ ++ ++HL +L+EFW +D ++S++ + L L+T+Y +RNP+ ++
Sbjct: 267 LDITGNPITTLEGVSHLKDLEEFWASDCKLSNYKEIETELGQLPNLETVYFERNPLHREN 326
Query: 298 -PNYRRKIKL-VCPWIVQIDATL 318
YR K++L + P + QIDAT
Sbjct: 327 PATYRNKVRLCLGPSLRQIDATF 349
>gi|451850617|gb|EMD63919.1| hypothetical protein COCSADRAFT_144466 [Cochliobolus sativus
ND90Pr]
Length = 382
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 179/291 (61%), Gaps = 8/291 (2%)
Query: 36 DNPDEESEAETTESKAEDEES----KEVCIERLLLRWNLIKKIE-NIHMLTTLKELELYD 90
D PD+E E E K D S + ++RL LR N I+ I + ++L E++LYD
Sbjct: 88 DVPDDEEEIELVHCKVSDMSSLRLERFKQMKRLCLRQNRIESIAIPEELASSLTEVDLYD 147
Query: 91 NQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLK 150
N + I+ LD L LDLSFN+I+ IK L+H+ L+ LY NKI IEN++ L L+
Sbjct: 148 NLIAHIKGLDAFTELTSLDLSFNKIKHIKRLNHMTKLKDLYFVQNKIGTIENLEGLTNLR 207
Query: 151 VLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLE 210
+ELG N++R I+ L+ LT LEEL+LGKNKI+ I L +LT L ILS+Q NRLR+I LE
Sbjct: 208 QIELGANRVREIQGLETLTGLEELWLGKNKITEIKGLDTLTNLKILSIQSNRLRSITGLE 267
Query: 211 ALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
L NL +L++S N LT + L +N L +D++ N I + + L L EFW ++ ++S
Sbjct: 268 KLVNLEELHISHNLLTEVSGLENNVNLNVIDISANPIEHLGGLKSLKHLTEFWASNCKLS 327
Query: 271 DWNTVNV-LENNKQLQTIYLDRNPV--AQDPNYRRKIKLVCPWIVQIDATL 318
D+ + L + ++L+T+Y + NP+ AQ YR KI+L P +VQIDAT
Sbjct: 328 DFGEIERELRDKEELETVYFEGNPLQRAQPALYRNKIRLALPQVVQIDATF 378
>gi|357626298|gb|EHJ76433.1| hypothetical protein KGM_01212 [Danaus plexippus]
Length = 170
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 136/169 (80%)
Query: 151 VLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLE 210
+LELGDN+IR I+NLDG+ +L ELYLGKNKI++I NL L L I+ LQ NRL IENLE
Sbjct: 1 MLELGDNRIREIKNLDGMKSLRELYLGKNKITKIQNLEDLVNLEIIVLQSNRLTRIENLE 60
Query: 211 ALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
LTNL QLY+SENG+++IENL + KL+TLD+A N+I++I+N+ H++EL+E W+N+NQ+S
Sbjct: 61 HLTNLEQLYISENGISSIENLSNQVKLQTLDLAMNRITVIENVRHMSELEELWLNNNQIS 120
Query: 271 DWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDATLA 319
+W++V+ L+ NK+L TIYL+ NP+ DP YRRK+KL P + QIDATL
Sbjct: 121 EWSSVDYLQENKKLATIYLEHNPITSDPAYRRKLKLALPSLQQIDATLC 169
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 3/136 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I++I+N+ + +L+EL L N++T I+NL+ L+NLEI+ L NR+ I+ L+HL NLE
Sbjct: 7 NRIREIKNLDGMKSLRELYLGKNKITKIQNLEDLVNLEIIVLQSNRLTRIENLEHLTNLE 66
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI---SRID 185
+LY+ N IS IEN+ + KL+ L+L N+I +IEN+ ++ LEEL+L N+I S +D
Sbjct: 67 QLYISENGISSIENLSNQVKLQTLDLAMNRITVIENVRHMSELEELWLNNNQISEWSSVD 126
Query: 186 NLASLTKLNILSLQCN 201
L KL + L+ N
Sbjct: 127 YLQENKKLATIYLEHN 142
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V +E ++L+ N + +IEN+ LT L++L + +N ++ IENL + L+ LDL+ NRI I
Sbjct: 41 VNLEIIVLQSNRLTRIENLEHLTNLEQLYISENGISSIENLSNQVKLQTLDLAMNRITVI 100
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHL---KKLKVLELGDNKI 159
+ + H++ LE+L+L +N+IS+ +VD+L KKL + L N I
Sbjct: 101 ENVRHMSELEELWLNNNQISEWSSVDYLQENKKLATIYLEHNPI 144
>gi|322694501|gb|EFY86329.1| protein phosphatases PP1 regulatory subunit sds22 [Metarhizium
acridum CQMa 102]
Length = 377
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/262 (43%), Positives = 173/262 (66%), Gaps = 4/262 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ R+ LR N I++IE + L TLK+L+LYDN ++ + +D L NL LDLSFN+I+ IK
Sbjct: 113 VARICLRQNSIQEIEGLAPLAGTLKDLDLYDNLISHMRGMDELKNLVCLDLSFNKIKHIK 172
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL L++L+L +NKISKIE +D L+KLK LELG N+IR + NLD L NLEEL++ KN
Sbjct: 173 NISHLTELKELFLVANKISKIEGLDTLQKLKSLELGSNRIREMRNLDNLQNLEELWVAKN 232
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + L L L +LS+Q NR+R + L+ + L +LY++ N L ++E + + L
Sbjct: 233 KITELTGLGGLPSLRLLSIQSNRIRDLSPLKEVPQLEELYIAHNALESLEGIEGSTNLTI 292
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVA-QD 297
LD++ N+I ++ + LT L+E W + NQ+ D+ V VL++ K L T+Y + NP+ +
Sbjct: 293 LDISNNQIRSLKGLEGLTRLEEVWASYNQIGDFVEVEKVLKDKKNLTTVYFEGNPLQLRG 352
Query: 298 PN-YRRKIKLVCPWIVQIDATL 318
P YR K++L P + QIDAT
Sbjct: 353 PALYRNKVRLALPQVSQIDATF 374
>gi|145228987|ref|XP_001388802.1| phosphatase 1 regulatory subunit SDS22 [Aspergillus niger CBS
513.88]
gi|134054898|emb|CAK36910.1| unnamed protein product [Aspergillus niger]
Length = 344
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/261 (45%), Positives = 168/261 (64%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++RL R N I +IE + +L EL+LYDN ++ ++ LD NL LDLSFN+I+ +K
Sbjct: 79 VKRLCFRQNQISRIEFPTEVAKSLTELDLYDNLISHVKGLDEFENLTSLDLSFNKIKHVK 138
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL L LY NKISKIE V+ L+ LELG N+IR IENLD L LEEL+LGKN
Sbjct: 139 NISHLVKLTDLYFVQNKISKIEGVETFTSLRNLELGANRIREIENLDNLKALEELWLGKN 198
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + NL L+ L ILS+Q NRL I L L NL +LY+S N +T + L N L
Sbjct: 199 KITELKNLDGLSNLRILSIQSNRLTKISGLANLKNLEELYVSHNAITDLSGLEENTSLRV 258
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQD 297
LD + N++S +++++HL L+E W ++NQ+S ++ V L + + LQT+Y + NP+ +
Sbjct: 259 LDFSNNQVSKLEHLSHLKNLEELWASNNQLSSFDEVERELRDKENLQTVYFEGNPLQTRA 318
Query: 298 PN-YRRKIKLVCPWIVQIDAT 317
P YR K++L P I+Q+DAT
Sbjct: 319 PALYRNKVRLAIPHIMQVDAT 339
>gi|213410531|ref|XP_002176035.1| protein phosphatase 1 regulatory subunit SDS22 [Schizosaccharomyces
japonicus yFS275]
gi|212004082|gb|EEB09742.1| protein phosphatase 1 regulatory subunit SDS22 [Schizosaccharomyces
japonicus yFS275]
Length = 338
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 127/262 (48%), Positives = 174/262 (66%), Gaps = 6/262 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L LR N I KIE + T+LKEL+LYDN +T IE L+ +L LDLSFN I++IK
Sbjct: 69 LENLCLRQNRIHKIECVP--TSLKELDLYDNLITKIEGLEQSTDLINLDLSFNNIKKIKN 126
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+DHL NLE LY N+I KIEN++ L KL LELG NKIR+IENLD L NL+EL+LGKNK
Sbjct: 127 VDHLKNLENLYFVQNRIRKIENLEGLSKLTNLELGGNKIRVIENLDTLKNLKELWLGKNK 186
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTN-LTQLYLSENGLTTIENLLSNEKLET 239
I+ + NL +LT L +LS+Q NR+ ENL L N L +LY+S NGLT++E + L T
Sbjct: 187 ITVLQNLENLTNLRLLSIQSNRILRFENLSGLANCLEELYISYNGLTSLEGIEVLTNLRT 246
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPV--AQ 296
LDV+ N+I + ++ L L+E W ++NQ+S + V L + ++L T+Y + NP+ +
Sbjct: 247 LDVSNNRIEHLTHLKGLKHLEELWASNNQISSFAEVEEQLGDKEELNTVYFEGNPLQTSN 306
Query: 297 DPNYRRKIKLVCPWIVQIDATL 318
Y K++L P I Q+DAT
Sbjct: 307 RAAYVNKVRLCLPQIRQLDATF 328
>gi|407917596|gb|EKG10900.1| hypothetical protein MPH_11902 [Macrophomina phaseolina MS6]
Length = 390
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/261 (47%), Positives = 171/261 (65%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL LR N I IE L TL+EL+LYDN + I+ LD L LDLSFN+I+ IK
Sbjct: 110 LERLSLRQNQISAIEFPESLGATLQELDLYDNLIAHIKGLDQFTELINLDLSFNKIKHIK 169
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L+H+ L+ LY NKIS IEN++ L +L+ LELG N+IR IENL+ LT LEEL+LGKN
Sbjct: 170 RLNHMKKLKDLYFVQNKISTIENLEGLTELRNLELGANRIRSIENLETLTGLEELWLGKN 229
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ I L +L+ L ILS+Q NRL +I LE L NL +L++S N LT+ E L + L
Sbjct: 230 KITEIKGLDTLSNLKILSIQSNRLTSISGLENLKNLEELHISHNALTSTEGLEHSTNLRV 289
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV--AQ 296
+D+ N I + N++ LT L+EFW + ++SD+ V L++ +QL+T+Y + NP+ Q
Sbjct: 290 IDITGNPIEHLTNLSALTNLEEFWASYCKLSDFAEVERELKDKEQLETVYFEGNPLQTKQ 349
Query: 297 DPNYRRKIKLVCPWIVQIDAT 317
YR K++L P + QIDA+
Sbjct: 350 PALYRNKVRLALPQVKQIDAS 370
>gi|367018380|ref|XP_003658475.1| hypothetical protein MYCTH_2073132 [Myceliophthora thermophila ATCC
42464]
gi|347005742|gb|AEO53230.1| hypothetical protein MYCTH_2073132 [Myceliophthora thermophila ATCC
42464]
Length = 378
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 113/262 (43%), Positives = 172/262 (65%), Gaps = 4/262 (1%)
Query: 61 IERLLLRWNLIKKIENIH-MLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ R+ LR NLI+ IE + +TL +L+LYDN ++ I LD L+NL LDLSFN+I+ IK
Sbjct: 114 VARICLRQNLIQDIEGFSCVASTLNDLDLYDNLISRIRGLDDLVNLTSLDLSFNKIKHIK 173
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL NL LYL +NKISKIE + L +L+ LELG N+IR +ENL+ L +LEEL++ KN
Sbjct: 174 HVSHLTNLTDLYLVANKISKIEGLAGLTRLRNLELGSNRIRQLENLETLKSLEELWVAKN 233
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + LA L L +LS+Q NR+R + L + L +LY+S N L ++E L N +L
Sbjct: 234 KITSLTGLAGLPNLRLLSIQSNRIRDLSPLRDVPQLEELYISHNALASLEGLEHNTRLRV 293
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QD 297
L+V+ N+I+ ++ + L +L+E W + NQ++D+ + L + + L T+Y + NP+ +
Sbjct: 294 LEVSNNQIASLRGLGPLADLEELWASYNQIADFAELERELADKRALTTVYFEGNPLQLRA 353
Query: 298 PN-YRRKIKLVCPWIVQIDATL 318
P YR K++L P + Q+DAT
Sbjct: 354 PALYRNKVRLALPQVRQVDATF 375
>gi|281208430|gb|EFA82606.1| Protein phosphatase [Polysphondylium pallidum PN500]
Length = 330
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/260 (46%), Positives = 176/260 (67%), Gaps = 4/260 (1%)
Query: 63 RLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL- 121
+L LR NLI++IE + L +L+ L+LYDN++ I+NL+ L NL LD+SFN IR I+ L
Sbjct: 69 KLCLRQNLIEEIEGVDTLVSLESLDLYDNRIKNIKNLNNLHNLTYLDISFNEIRGIENLF 128
Query: 122 -DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+ LYL +NKI++I N+D L L LELG N++R I+NLD LT +E L+LG+NK
Sbjct: 129 AKELPKLKDLYLANNKITEIINLDQLDTLTNLELGSNRLREIKNLDNLTKIETLWLGRNK 188
Query: 181 ISRIDNLASLTKLNILSLQCNRL-RTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
I+ I N++ +T L I+S+Q NRL R + L LTNLT+LYLS NG+T I+ L + +L+
Sbjct: 189 ITEIKNISHMTPLRIMSIQSNRLTRVGDGLVGLTNLTELYLSHNGITDIDGLQTLTQLQI 248
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPN 299
LD++ NKI + I LT+L++ W NDN+ D + + + +KQ+Q +Y +RNP+AQ
Sbjct: 249 LDISANKIKKLVGIDKLTQLEDLWCNDNECDDMDNIEQ-QIHKQIQVLYFERNPLAQHQQ 307
Query: 300 YRRKIKLVCPWIVQIDATLA 319
YRR + P + Q+DATL
Sbjct: 308 YRRIFINMFPQLKQLDATLV 327
>gi|336261256|ref|XP_003345419.1| hypothetical protein SMAC_04650 [Sordaria macrospora k-hell]
gi|380090673|emb|CCC11668.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 335
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 118/263 (44%), Positives = 170/263 (64%), Gaps = 5/263 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIREI 118
+ R+ LR NLI+ IE + + TL++L+LYDN ++ I L L NL LDLSFN+I+ I
Sbjct: 70 VARICLRQNLIQDIEGLSAVAETLQDLDLYDNLISHIGRGLTELTNLTSLDLSFNKIKHI 129
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
K ++HL NL L+ SNKIS+IE ++ L KL+ LELG N++R ++NLD L NLEEL++ K
Sbjct: 130 KHVNHLTNLTDLFFVSNKISRIEGLEGLDKLRNLELGSNRVRELQNLDSLKNLEELWVAK 189
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
NKI+ + L L KL +LS+Q NR+R + L + L +LY+S N L ++E L N KL
Sbjct: 190 NKITGLTGLGGLPKLRLLSIQSNRIRDLSPLREVPQLEELYISHNALESLEGLEHNTKLR 249
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-Q 296
LD++ NKI+ ++ I L EL+E W + N V D+ V L+ K L T+Y + NP+ +
Sbjct: 250 VLDISNNKIASLKGIGPLAELEELWASYNMVGDFAEVERELKEKKNLTTVYFEGNPLQLR 309
Query: 297 DPN-YRRKIKLVCPWIVQIDATL 318
P YR K++L P + QIDAT
Sbjct: 310 APALYRNKVRLALPQVQQIDATF 332
>gi|402079184|gb|EJT74449.1| protein phosphatase 1 regulatory subunit SDS22 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 392
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 112/261 (42%), Positives = 175/261 (67%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L LR N I+ IE + L +L+EL+LYDN +T I+ LD L +L +LDLSFN+I+ I+
Sbjct: 127 VAGLCLRQNAIQDIEGLAGLAGSLQELDLYDNLITGIQGLDELASLTVLDLSFNKIKRIE 186
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
++HL L L+ SNKI +IEN++ L KL++LELG N+IR ++NLD L LEELY+ KN
Sbjct: 187 KVNHLKQLTDLFFVSNKIREIENLEGLDKLRMLELGSNRIRELKNLDSLKALEELYVAKN 246
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + LA L +L +LS+Q NR+R + L + L +LY++ N L ++E L N +L+
Sbjct: 247 KITELRGLAGLPRLRLLSIQSNRIRDLSPLRDVPQLEELYVTHNALESLEGLEHNTRLQV 306
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QD 297
LD++ N+I+ ++ + L EL + W + NQV+D+ ++ L + ++L T+Y + NP+ +
Sbjct: 307 LDISNNQIASLKGLGPLKELTDVWASYNQVADFAELDRELRDKEKLTTVYFEGNPLQLRG 366
Query: 298 PN-YRRKIKLVCPWIVQIDAT 317
P YR K++L P + QIDAT
Sbjct: 367 PALYRNKVRLALPQLTQIDAT 387
>gi|121702831|ref|XP_001269680.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Aspergillus clavatus NRRL 1]
gi|119397823|gb|EAW08254.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Aspergillus clavatus NRRL 1]
Length = 351
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/261 (44%), Positives = 174/261 (66%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++R+ LR N I +IE + T+ EL+LYDN ++ + LD +L LDLSFN+I+ IK
Sbjct: 79 LQRICLRQNQITRIEFPSEIAPTMLELDLYDNLISHMRGLDDFRDLTSLDLSFNKIKHIK 138
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL +L LY ++ISKIE ++ L KL+ LELG N+IR IENL+ L LEEL+LGKN
Sbjct: 139 NISHLVHLTDLYFVQDRISKIEGLEGLTKLRNLELGANRIREIENLETLAALEELWLGKN 198
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + NL +L+ L I+S+Q NRL +I L +L NL +LYLS N +T + L SN L
Sbjct: 199 KITEMKNLDALSNLRIISIQSNRLTSITGLSSLQNLEELYLSHNAITDLSGLESNTALRV 258
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQD 297
LD + N++S +++I+HL L+E W ++NQ++ + V L++ K L T+Y + NP+ +
Sbjct: 259 LDFSNNQVSKLEHISHLKNLEELWASNNQLASFEEVERELKDTKTLNTVYFEGNPLQTKG 318
Query: 298 PN-YRRKIKLVCPWIVQIDAT 317
P YR K++L P I+QIDA+
Sbjct: 319 PAVYRNKVRLALPQIMQIDAS 339
>gi|85111429|ref|XP_963932.1| protein phosphatases PP1 regulatory subunit sds22 [Neurospora
crassa OR74A]
gi|28925683|gb|EAA34696.1| protein phosphatases PP1 regulatory subunit sds22 [Neurospora
crassa OR74A]
Length = 383
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/261 (45%), Positives = 171/261 (65%), Gaps = 5/261 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIREI 118
+ R+ LR NLI+ IE + + TL++L+LYDN ++ I L L NL LDLSFN+I+ I
Sbjct: 115 VARICLRQNLIQDIEGLAAVAETLQDLDLYDNLISHIGRGLTDLTNLTSLDLSFNKIKHI 174
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
K ++HL NL L+ SNKIS+IE ++ L KL+ LELG N+IR ++NLD L NLEEL++ K
Sbjct: 175 KHINHLTNLTDLFFVSNKISRIEGLEGLDKLRNLELGSNRIRELQNLDSLKNLEELWVAK 234
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
NKI+ + L L KL +LS+Q NR+R + L + L +LY+S N L ++E L +N KL
Sbjct: 235 NKITELTGLGGLPKLRLLSIQSNRIRDLSPLREVPQLEELYISHNALESLEGLENNTKLR 294
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-Q 296
LD++ NKI+ ++ I L EL+E W + N V D+ V L++ K L T+Y + NP+ +
Sbjct: 295 VLDISNNKIASLKGIGPLEELEELWASYNMVGDFAEVERELKDKKNLTTVYFEGNPLQLR 354
Query: 297 DPN-YRRKIKLVCPWIVQIDA 316
P YR K++L P + QIDA
Sbjct: 355 APALYRNKVRLALPQVQQIDA 375
>gi|392564128|gb|EIW57306.1| L domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 389
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/266 (45%), Positives = 170/266 (63%), Gaps = 9/266 (3%)
Query: 61 IERLLLRWNLIKKI--ENIHMLTTLKELELYDNQLT-VIENLDTLINLEILDLSFNRIRE 117
++RL LR N I + E LT L++L+ YDN++ V L+ + L LDLSFN ++
Sbjct: 119 LKRLCLRQNFITHVDQEVFGALTKLEDLDFYDNKIKHVGPALNNMTGLVTLDLSFNMLKH 178
Query: 118 I--KGLDHLANLEKLYLCSNKISKIENVDHLKK-LKVLELGDNKIRIIENLDGLTNLEEL 174
I + HL L+ ++ NKIS+I N+ L L+ LELG N+IR IE LD L NLEEL
Sbjct: 179 IPEEFESHLKALKTIFFVQNKISRISNLSGLSATLRSLELGGNRIRKIEGLDALANLEEL 238
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LGKNKI++++ L L KL ILS+Q NR+ +E L+ L NL +LY+S NG+ +E L N
Sbjct: 239 WLGKNKITQLEGLEELKKLKILSIQSNRITKLEGLDGLENLEELYISHNGILKLEGLDKN 298
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNP 293
KL TLD N I ++NI+HLT L+E WINDN++ + V L++ L+TIYL+ NP
Sbjct: 299 PKLRTLDAGNNFIETLENISHLTTLEELWINDNRIDNLKDVEPQLKHITTLETIYLEGNP 358
Query: 294 V--AQDPNYRRKIKLVCPWIVQIDAT 317
V A+ +YRRK+ L P I Q+DAT
Sbjct: 359 VQSAEGAHYRRKVILALPQITQLDAT 384
>gi|444518585|gb|ELV12248.1| Protein phosphatase 1 regulatory subunit 7 [Tupaia chinensis]
Length = 315
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/250 (45%), Positives = 159/250 (63%), Gaps = 39/250 (15%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LE I+G+D L L+
Sbjct: 102 NLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELET----------IEGVDKLTRLK 151
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
KL+L +NKI+KIEN+ L +L++LELG N+IR IEN+D L+NLE L+LGKNKI+++ NL
Sbjct: 152 KLFLVNNKINKIENISSLHQLQMLELGSNRIRAIENIDSLSNLESLFLGKNKITKLQNLD 211
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
+LT L +LS+Q NRL IE L++L NL +LYLS NG+ IE L +N
Sbjct: 212 ALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLENN-------------- 257
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVC 308
+NDN + W+ ++ L+ + L+T+YL+RNP+ +DP YRRK+ L
Sbjct: 258 ---------------MNDNLLESWSDLDELKGARGLETVYLERNPLQKDPQYRRKVMLAL 302
Query: 309 PWIVQIDATL 318
P + QIDAT
Sbjct: 303 PSVRQIDATF 312
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 18/141 (12%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+++L L N I KIENI L L+ LEL N++ IEN+D+L NLE L L N+I +++
Sbjct: 150 LKKLFLVNNKINKIENISSLHQLQMLELGSNRIRAIENIDSLSNLESLFLGKNKITKLQN 209
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLD-------------- 166
LD L NL L + SN+++KIE + L L+ L L N I +IE L+
Sbjct: 210 LDALTNLTVLSMQSNRLTKIEGLQSLVNLRELYLSHNGIEVIEGLENNMNDNLLESWSDL 269
Query: 167 ----GLTNLEELYLGKNKISR 183
G LE +YL +N + +
Sbjct: 270 DELKGARGLETVYLERNPLQK 290
>gi|19114736|ref|NP_593824.1| protein phosphatase regulatory subunit Sds22 [Schizosaccharomyces
pombe 972h-]
gi|1173405|sp|P22194.2|SDS22_SCHPO RecName: Full=Protein phosphatase 1 regulatory subunit SDS22
gi|4490650|emb|CAB11482.1| protein phosphatase regulatory subunit Sds22 [Schizosaccharomyces
pombe]
Length = 332
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/262 (46%), Positives = 176/262 (67%), Gaps = 6/262 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N IKKIE++ TL EL+LYDN + IENLD + NL LDLSFN I+ I+
Sbjct: 64 LQSLCLRQNQIKKIESVP--ETLTELDLYDNLIVRIENLDNVKNLTYLDLSFNNIKTIRN 121
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
++HL LE L+ N+I +IEN++ L +L LELG NKIR+IENLD L NLE+L++GKNK
Sbjct: 122 INHLKGLENLFFVQNRIRRIENLEGLDRLTNLELGGNKIRVIENLDTLVNLEKLWVGKNK 181
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTN-LTQLYLSENGLTTIENLLSNEKLET 239
I++ +N L KL++LS+Q NR+ ENL L++ L +LY+S NGLT+ + E LE
Sbjct: 182 ITKFENFEKLQKLSLLSIQSNRITQFENLACLSHCLRELYVSHNGLTSFSGIEVLENLEI 241
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVAQ-D 297
LDV+ N I + +A L L E W ++N++S + + + L K+L+T+Y + NP+ + +
Sbjct: 242 LDVSNNMIKHLSYLAGLKNLVELWASNNELSSFQEIEDELSGLKKLETVYFEGNPLQKTN 301
Query: 298 PN-YRRKIKLVCPWIVQIDATL 318
P YR K++L P + QIDAT+
Sbjct: 302 PAVYRNKVRLCLPQLRQIDATI 323
>gi|302678197|ref|XP_003028781.1| hypothetical protein SCHCODRAFT_59265 [Schizophyllum commune H4-8]
gi|300102470|gb|EFI93878.1| hypothetical protein SCHCODRAFT_59265 [Schizophyllum commune H4-8]
Length = 330
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/296 (45%), Positives = 184/296 (62%), Gaps = 12/296 (4%)
Query: 36 DNPDEESEAETTESKAEDEESKEVC-----IERLLLRWNLIKKIEN--IHMLTTLKELEL 88
D PDE E E S+ + + +++L LR N I +E H LT L EL+
Sbjct: 29 DFPDETYELELIHSRIANLAPLRLPRFGPYLQKLCLRQNQIAHLEPDIFHHLTNLDELDF 88
Query: 89 YDNQLT-VIENLDTLINLEILDLSFNRIREIK-GLDHLANLEKLYLCSNKISKIENVDHL 146
YDN++ V LD L L +LDLSFN IR I L L +L+ +Y N+ISKI +++L
Sbjct: 89 YDNKIKHVGRALDKLDKLTVLDLSFNNIRTIPDALQTLPSLKTVYFVQNRISKISGLENL 148
Query: 147 KKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTI 206
L +ELG NKIR IENLD L NLEEL+LGKNKISR++NL SL KL ILS+Q NR+ +
Sbjct: 149 TNLTSIELGGNKIRKIENLDALVNLEELWLGKNKISRLENLGSLKKLRILSIQSNRITKL 208
Query: 207 ENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWIND 266
E LE L +L +LY+S NG+ IE L N KL TLD+ N I ++N++HLT L+E W+++
Sbjct: 209 EGLEELESLEELYISHNGIQKIEGLEKNTKLTTLDIGNNFIKDLENVSHLTSLEELWMSN 268
Query: 267 NQVSDWNTVNV-LENNKQLQTIYLDRNPVAQD--PNYRRKIKLVCPWIVQIDATLA 319
N++ D + L++ K L T+YL+ NP + NYRRKI+L P + QIDAT
Sbjct: 269 NEIPDLRGLEPQLKHIKTLTTLYLEGNPCQKTDMANYRRKIQLALPQLKQIDATFT 324
>gi|358390603|gb|EHK40008.1| hypothetical protein TRIATDRAFT_302518 [Trichoderma atroviride IMI
206040]
Length = 379
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/260 (43%), Positives = 177/260 (68%), Gaps = 4/260 (1%)
Query: 63 RLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
R+ LR N+I+ IE++ L +L++L+LYDN + I LD+L L LDLSFN+I+ IK +
Sbjct: 117 RICLRQNVIQDIESLDGLADSLEDLDLYDNLIGHIRGLDSLTKLTSLDLSFNKIKHIKHI 176
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
+HL L++L+L +NKISKIE ++ L L+ LELG N+IR I+NLD L NLEEL+L KNKI
Sbjct: 177 NHLKELKELFLVANKISKIEGLEGLDNLRSLELGSNRIREIQNLDSLKNLEELWLAKNKI 236
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + L L KL +LS+Q NR+R + L+ + L +LY++ N L ++E + +N L+TL+
Sbjct: 237 TDLAGLGGLPKLRLLSIQSNRIRDLSPLKEVPGLEELYIAHNALESLEGIENNVNLKTLE 296
Query: 242 VAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QDPN 299
++ N+I+ ++ + L +L+E W + NQ++D+ V L++ + L T+Y + NP+ + P
Sbjct: 297 ISNNQITSLKGVGPLKDLEEVWASYNQIADFADVERELKDKEDLTTVYFEGNPLQLRGPA 356
Query: 300 -YRRKIKLVCPWIVQIDATL 318
YR K++L P + QIDAT
Sbjct: 357 LYRNKVRLALPQVKQIDATF 376
>gi|302907428|ref|XP_003049644.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256730580|gb|EEU43931.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 376
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/260 (45%), Positives = 172/260 (66%), Gaps = 4/260 (1%)
Query: 63 RLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
R+ LR N I++I+ + L TL++L+LYDN ++ + LD L NL LDLSFN+I+ IK +
Sbjct: 114 RVCLRQNSIQEIDGLSGLAETLQDLDLYDNLISHVRGLDDLTNLTSLDLSFNKIKHIKHI 173
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
HL +L++L+L +NKI KIE ++ L KL LELG N+IR ++NLD L LEEL++ KNKI
Sbjct: 174 SHLKDLKELFLVANKIGKIEGLEGLDKLTSLELGSNRIRELKNLDTLVALEELWVAKNKI 233
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + L L L +LS+Q NR+ + L+ + L +LY+S N L ++E L N KL LD
Sbjct: 234 TELSGLGGLPNLRLLSIQSNRITDLSPLKDVPTLEELYISHNLLESLEGLEHNVKLRVLD 293
Query: 242 VAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN-VLENNKQLQTIYLDRNPVA-QDP- 298
++ NK++ I+ +A L EL+E W + N VSD+ V+ L + K L T+Y + NP+ Q+P
Sbjct: 294 ISNNKVTSIEGLAPLVELEELWASYNLVSDYKEVSKYLADKKNLTTVYFEGNPLQLQEPV 353
Query: 299 NYRRKIKLVCPWIVQIDATL 318
YR +I+L P I QIDAT
Sbjct: 354 AYRNRIRLTLPQIKQIDATF 373
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 22/124 (17%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V +E L + N I ++ + L L+ L + N++T + L + LE L +S N + +
Sbjct: 221 VALEELWVAKNKITELSGLGGLPNLRLLSIQSNRITDLSPLKDVPTLEELYISHNLLESL 280
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
+GL+H NV KL+VL++ +NK+ IE L L LEEL+
Sbjct: 281 EGLEH------------------NV----KLRVLDISNNKVTSIEGLAPLVELEELWASY 318
Query: 179 NKIS 182
N +S
Sbjct: 319 NLVS 322
>gi|255724430|ref|XP_002547144.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135035|gb|EER34589.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 359
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 180/261 (68%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIEN-LDTLINLEILDLSFNRIREI 118
++ L LR NLI I + ++ L+EL+LYDN++ I + + L+NL+ LD SFNRI+ I
Sbjct: 96 LQSLCLRQNLITSIVAVKEISDKLEELDLYDNRINHISSSIGHLVNLKTLDFSFNRIKNI 155
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
K +++L N+E+L+ NKI +I+N+++L KL++LELG NKI IENL+ NL+ L+LG
Sbjct: 156 KNIENLINIEQLFFVQNKIKEIKNIENLTKLRMLELGANKIERIENLEPFINLQSLFLGS 215
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N+IS+++ L +L L +LS+Q N + IENL+ L NL +LYL+ N L+ IE L + E L+
Sbjct: 216 NRISKLEGLDTLVNLKVLSIQSNGISKIENLDKLKNLEELYLTSNRLSEIEGLENLENLQ 275
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV--AQ 296
LD+++NKIS + N+ HL +L++ WI+ N + +N V+ L + L+T+YL+ NP+
Sbjct: 276 ILDLSHNKISKLDNLGHLQKLEDLWISSNLIDSFNEVDKLSKLESLETVYLEHNPIQLKN 335
Query: 297 DPNYRRKIKLVCPWIVQIDAT 317
+YRRK+KL P + ++DAT
Sbjct: 336 ATSYRRKVKLALPNLKKLDAT 356
>gi|173479|gb|AAA35342.1| sds22+ [Schizosaccharomyces pombe]
Length = 280
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/262 (46%), Positives = 176/262 (67%), Gaps = 6/262 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N IKKIE++ TL EL+LYDN + IENLD + NL LDLSFN I+ I+
Sbjct: 12 LQSLCLRQNQIKKIESVP--ETLTELDLYDNLIVRIENLDNVKNLTYLDLSFNNIKTIRN 69
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
++HL LE L+ N+I +IEN++ L +L LELG NKIR+IENLD L NLE+L++GKNK
Sbjct: 70 INHLKGLENLFFVQNRIRRIENLEGLDRLTNLELGGNKIRVIENLDTLVNLEKLWVGKNK 129
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTN-LTQLYLSENGLTTIENLLSNEKLET 239
I++ +N L KL++LS+Q NR+ ENL L++ L +LY+S NGLT+ + E LE
Sbjct: 130 ITKFENFEKLQKLSLLSIQSNRITQFENLACLSHCLRELYVSHNGLTSFSGIEVLENLEI 189
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVAQ-D 297
LDV+ N I + +A L L E W ++N++S + + + L K+L+T+Y + NP+ + +
Sbjct: 190 LDVSNNMIKHLSYLAGLKNLVELWASNNELSSFQEIEDELSGLKKLETVYFEGNPLQKTN 249
Query: 298 PN-YRRKIKLVCPWIVQIDATL 318
P YR K++L P + QIDAT+
Sbjct: 250 PAVYRNKVRLCLPQLRQIDATI 271
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 25/150 (16%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V +E+L + N I K EN L L L + N++T ENL
Sbjct: 118 VNLEKLWVGKNKITKFENFEKLQKLSLLSIQSNRITQFENLAC----------------- 160
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L H L +LY+ N ++ ++ L+ L++L++ +N I+ + L GL NL EL+
Sbjct: 161 --LSHC--LRELYVSHNGLTSFSGIEVLENLEILDVSNNMIKHLSYLAGLKNLVELWASN 216
Query: 179 NKISRI----DNLASLTKLNILSLQCNRLR 204
N++S D L+ L KL + + N L+
Sbjct: 217 NELSSFQEIEDELSGLKKLETVYFEGNPLQ 246
>gi|425772904|gb|EKV11284.1| hypothetical protein PDIG_51200 [Penicillium digitatum PHI26]
gi|425782086|gb|EKV20015.1| hypothetical protein PDIP_20400 [Penicillium digitatum Pd1]
Length = 322
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 190/305 (62%), Gaps = 7/305 (2%)
Query: 18 VTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIERLLLRWNLIKKIE-N 76
V N EA+E++ + D P E E E E DE+ +RL +R N I ++
Sbjct: 18 VITNPEALEDS--DYSDPDAPPVE-EIEADEDLLADEDVNSEDQQRLCMRQNQISRVNFP 74
Query: 77 IHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNK 136
++ +L EL+LYDN ++ I+ L+ NL LDLSFN+I+ IK + HL L +++ NK
Sbjct: 75 PNVAASLTELDLYDNLISHIKGLEEFHNLTSLDLSFNKIKHIKNVSHLKKLTEIFFVQNK 134
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
IS+IE ++ L ++K LELG NKIR IENL+ LT LEEL+LGKNKI + NL SL+ L I+
Sbjct: 135 ISRIEGLEDLTRIKNLELGANKIREIENLETLTALEELWLGKNKIVEMKNLDSLSNLRII 194
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
S+Q NRL I L AL L +LYLS N +T + L SNE L LD + N++S +++++ L
Sbjct: 195 SIQSNRLTKITGLSALPKLEELYLSHNAVTDLSGLESNETLRVLDFSNNQVSHLEHLSSL 254
Query: 257 TELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QDPN-YRRKIKLVCPWIVQ 313
L+E W ++NQ++ + V L++ ++LQT+Y + NP+ P YR K++L P I Q
Sbjct: 255 KNLEELWGSNNQLASFEEVERELKDKEKLQTVYFEGNPLQLNGPAVYRNKVRLALPNIQQ 314
Query: 314 IDATL 318
IDAT
Sbjct: 315 IDATF 319
>gi|361124177|gb|EHK96286.1| putative protein phosphatase 1 regulatory subunit SDS22 [Glarea
lozoyensis 74030]
Length = 401
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 121/264 (45%), Positives = 168/264 (63%), Gaps = 13/264 (4%)
Query: 59 VCIERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIRE 117
+ RL LR N I +IE L TLKEL+LYDN + I LD LSFN+I+
Sbjct: 130 TAVARLCLRQNTITEIEGFSCLAATLKELDLYDNLIAHIRGLD---------LSFNKIKH 180
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
IK ++HL NL +Y NKI KIEN++ L KL+ LEL N+IR IENL+ LT LEEL+LG
Sbjct: 181 IKKVNHLTNLTDIYFVQNKIGKIENLEGLTKLRNLELAANRIREIENLETLTGLEELWLG 240
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KNKI++I N+ SL L ILS+Q NR+R I L+ L +L +LY+S N LT++ L L
Sbjct: 241 KNKITQISNIDSLQNLKILSIQSNRIRGITGLDNLPHLEELYISHNALTSLSGLEKVMGL 300
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVA- 295
LDV+ N+I+ I+ + HL +L+E W + NQ+ D + L+ K+L T+Y + NP+
Sbjct: 301 RVLDVSNNQITSIKGLKHLEDLEEVWASYNQIGDIAEIEEELKERKKLNTVYFEGNPLQL 360
Query: 296 QDPN-YRRKIKLVCPWIVQIDATL 318
++P YR K++L P ++QIDAT
Sbjct: 361 RNPTLYRNKVRLTLPQVMQIDATF 384
>gi|406859018|gb|EKD12091.1| protein phosphatases PP1 regulatory subunit sds22 [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 393
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 123/291 (42%), Positives = 177/291 (60%), Gaps = 8/291 (2%)
Query: 36 DNPDEESEAETTESKAEDEES----KEVCIERLLLRWNLIKKIENIHMLT-TLKELELYD 90
D P + +E + ++ S + +ERL LR N I IE + L+ TLK+L+LYD
Sbjct: 99 DYPPDTTEIDCVHARVSSIPSLRLERFALVERLCLRQNSIATIEALSPLSATLKDLDLYD 158
Query: 91 NQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLK 150
N ++ I NLD+L L+ LDLSFN+I+ IK + HL L LY NKIS I+ ++ L KL+
Sbjct: 159 NLISSIRNLDSLTLLQNLDLSFNKIKHIKHISHLKELRDLYFVQNKISVIQGLEGLGKLR 218
Query: 151 VLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLE 210
LEL N+IR I+ L+ L LEEL+LGKNKI+ I L +L L ILS+Q NR+R I L
Sbjct: 219 NLELAANRIREIQGLETLVGLEELWLGKNKITEIKGLETLQNLKILSIQSNRIREITGLS 278
Query: 211 ALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
L L ++Y+S N LTT+ L + L LD++ N+I+ ++ + L EL+E W + N V+
Sbjct: 279 TLPKLEEVYISHNALTTLSGLQDCKGLRVLDISNNQIASLRGLEGLAELEEVWASYNLVA 338
Query: 271 DWNTV-NVLENNKQLQTIYLDRNPVA-QDPN-YRRKIKLVCPWIVQIDATL 318
D+ V VL+ L T+Y + P+ + P YR KI+L P ++QIDAT
Sbjct: 339 DFREVEEVLKGKGNLNTVYFEGCPLQLRAPALYRNKIRLALPQVMQIDATF 389
>gi|189207166|ref|XP_001939917.1| protein phosphatase 1 regulatory subunit 7 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976010|gb|EDU42636.1| protein phosphatase 1 regulatory subunit 7 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 314
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/272 (44%), Positives = 172/272 (63%), Gaps = 7/272 (2%)
Query: 51 AEDEESKEVCIERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILD 109
EDEE E+ RL LR N I+ I TL E++LYDN + I+ LD L LD
Sbjct: 42 PEDEEEIEL---RLCLRQNRIESIAIPPDSAPTLTEIDLYDNLIAHIKGLDAFTELTSLD 98
Query: 110 LSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLT 169
LSFN+I+ +K L+HL L+ LY NKIS IEN++ L L+ +ELG N++R I+ L+ LT
Sbjct: 99 LSFNKIKHMKRLNHLTKLKDLYFVQNKISTIENLEGLSNLRQIELGANRVREIQGLETLT 158
Query: 170 NLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
LEEL+LGKNKI+ I L +L+ L ILS+Q NRLRTI LE LTNL +L++S N LT +
Sbjct: 159 ALEELWLGKNKITEIKGLDTLSNLKILSIQSNRLRTITGLENLTNLEELHISHNLLTELT 218
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIY 288
L +N L +D++ N I + + L L EFW ++ ++SD+ + L + ++L+T+Y
Sbjct: 219 GLDNNTNLRVIDISANPIEHLSGLKSLKHLTEFWASNCKLSDYAEIERELRDKEELETVY 278
Query: 289 LDRNPV--AQDPNYRRKIKLVCPWIVQIDATL 318
+ NP+ +Q YR K++L P +VQIDAT
Sbjct: 279 FEGNPLQRSQPALYRNKVRLALPQVVQIDATF 310
>gi|67608808|ref|XP_666906.1| protein phosphatase-1 regulatory subunit 7 alpha2 [Cryptosporidium
hominis TU502]
gi|54657982|gb|EAL36679.1| protein phosphatase-1 regulatory subunit 7 alpha2 [Cryptosporidium
hominis]
Length = 339
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 195/295 (66%), Gaps = 10/295 (3%)
Query: 32 QMSLDNP--DEESEAETTESKAEDEESKEVC--IERLLLRWNLIKKIENIHMLTTLKELE 87
++ +D+P D++ E + + E+ C + L+L N I+KI+N+ L LK LE
Sbjct: 30 RIGIDHPVYDDDEEINIQCGRIGEIENLSKCKKLRSLMLISNHIRKIKNLDELIKLKTLE 89
Query: 88 LYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLK 147
LY N++ IENL+ L+NLE+LDLSFNRI++++ L++ L+KL+L +NKI I+ +++ K
Sbjct: 90 LYQNKIKKIENLEKLVNLEVLDLSFNRIKKLENLENQNKLKKLFLTNNKIKTIQGLNNNK 149
Query: 148 KLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR--T 205
+LK+LE+G N IRIIEN+D LT LEEL+LGKNKI+ +D++ + I+SLQ NR+ +
Sbjct: 150 ELKLLEVGSNDIRIIENIDHLTELEELWLGKNKITTLDDIPLFQNIKIISLQSNRIVNWS 209
Query: 206 IENLEALTNLTQLYLSENGLTTIENLL--SNEKLETLDVAYNKISIIQNIAHLTELQEFW 263
I + + N+ +LYLS+N L + + + S + L+ LD+ NKI ++ I+ + L+E W
Sbjct: 210 INFSKNVNNVQELYLSDNQLISPDKVYFDSFQNLKVLDLGGNKIQNLEAISKIESLEELW 269
Query: 264 INDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ--DPNYRRKIKLVCPWIVQIDA 316
INDN + D N + +L+N + LQT+YL+RNP+ P YR + + PWI Q+DA
Sbjct: 270 INDNDICDINQLELLKNLRNLQTLYLERNPIQNQLGPAYRLTVIKIVPWITQLDA 324
>gi|330930823|ref|XP_003303157.1| hypothetical protein PTT_15271 [Pyrenophora teres f. teres 0-1]
gi|311320995|gb|EFQ88745.1| hypothetical protein PTT_15271 [Pyrenophora teres f. teres 0-1]
Length = 398
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 177/290 (61%), Gaps = 8/290 (2%)
Query: 36 DNPDEESEAETTESKAEDEES----KEVCIERLLLRWNLIKKIE-NIHMLTTLKELELYD 90
D P++E E E K D S + ++RL LR N I+ I TL E++LYD
Sbjct: 87 DTPEDEEEIELVHCKISDMTSLRLERFKQMKRLCLRQNRIESIAIPPDSAPTLTEIDLYD 146
Query: 91 NQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLK 150
N + I+ LD L LDLSFN+I+ IK L HL L+ LY NKIS IEN++ L L+
Sbjct: 147 NLIAHIKGLDAFTELTSLDLSFNKIKHIKRLSHLTKLKDLYFVQNKISTIENLEGLSNLR 206
Query: 151 VLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLE 210
+ELG N++R I+ L+ LT LEEL+LGKNKI+ I L +L+ L ILS+Q NRL TI LE
Sbjct: 207 QIELGANRVREIQGLETLTALEELWLGKNKITEIKGLDTLSNLKILSIQSNRLHTITGLE 266
Query: 211 ALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
LTNL +L++S N LT + L +N L +D++ N I + + L L EFW ++ ++S
Sbjct: 267 NLTNLEELHISHNLLTELSGLDNNTNLRVIDISANPIEHLGGLKSLKHLTEFWASNCKLS 326
Query: 271 DWNTVNV-LENNKQLQTIYLDRNPV--AQDPNYRRKIKLVCPWIVQIDAT 317
D+ + L + ++L+T+Y + NP+ +Q YR K++L P +VQIDA+
Sbjct: 327 DYAEIERELRDKEELETVYFEGNPLQRSQPALYRNKVRLALPQVVQIDAS 376
>gi|345561165|gb|EGX44262.1| hypothetical protein AOL_s00193g174 [Arthrobotrys oligospora ATCC
24927]
Length = 349
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/267 (43%), Positives = 175/267 (65%), Gaps = 5/267 (1%)
Query: 57 KEVCIERLLLRWNLIKKIENIHMLT-TLKELELYDNQLT-VIENLDTLINLEILDLSFNR 114
K + RL LR N I +IE + + TL++++LYDN + + +L+ L+NLE LDLS+N
Sbjct: 79 KLTAVLRLCLRQNEISRIEGLECIAGTLQDIDLYDNAIGHMTRDLEVLVNLENLDLSYND 138
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
++ IK L+ L L+ LYL SN+I IE + L +LK LE+G NK+R I+NL+ LT LEEL
Sbjct: 139 LKHIKNLEKLVKLKNLYLASNRIGTIEGLGTLVELKNLEMGANKVREIQNLENLTKLEEL 198
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LGKNKIS I N++ L+ L ILSL NRL + L+ L NL +LY+S N + + L +
Sbjct: 199 WLGKNKISEIKNVSMLSNLKILSLPSNRLTKLSGLDGLNNLEELYVSHNAIEDLSGLENT 258
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNP 293
++ LDV +N+++ I+ I HL+ + +FW ++NQ+S + V +VL++ +L+T+Y + NP
Sbjct: 259 PNIKNLDVTHNRLTSIKGIEHLSHIVDFWASENQLSSFKEVEDVLKDKAELETVYFEANP 318
Query: 294 --VAQDPNYRRKIKLVCPWIVQIDATL 318
+ YR K++L P I QIDAT
Sbjct: 319 LQLMGPATYRNKVRLAIPHIKQIDATF 345
>gi|225680705|gb|EEH18989.1| protein phosphatase 1 regulatory subunit 7 [Paracoccidioides
brasiliensis Pb03]
Length = 371
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/261 (45%), Positives = 170/261 (65%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+E+L LR N I ++ L TL +L+LYDN ++ I+ L+ L L LD SFN I+ IK
Sbjct: 106 LEKLCLRQNQISRLSFPENLGPTLTDLDLYDNMISHIKGLEHLSKLTSLDFSFNNIKHIK 165
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL +L+ LY N+I KIE ++ LK+L+ LEL NKIR IENLD L LEEL+LGKN
Sbjct: 166 NISHLVHLKDLYFVQNRIQKIEGLEGLKELRNLELAANKIRDIENLDSLIALEELWLGKN 225
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ I N+ +L L I+SL NRL I L L NL +LY+S N +T I L ++ L
Sbjct: 226 KITEIKNIDALANLKIISLPSNRLTNISGLSNLPNLEELYVSHNAITAISGLENSTNLRV 285
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQD 297
LD++ N ISI++N++HL+ L+E W ++NQ + + V L++ ++L+T+Y + NP+ +
Sbjct: 286 LDISNNGISILENLSHLSHLEELWASNNQFASFEEVERELKDKEELKTVYFEGNPLQTKC 345
Query: 298 PN-YRRKIKLVCPWIVQIDAT 317
P YR K++L P I QIDAT
Sbjct: 346 PALYRNKVRLTLPQIQQIDAT 366
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 26/152 (17%)
Query: 164 NLDGLTNLEELYLGKNKISRI----------------DNLAS-------LTKLNILSLQC 200
+L+ TNLE+L L +N+ISR+ DN+ S L+KL L
Sbjct: 99 HLERFTNLEKLCLRQNQISRLSFPENLGPTLTDLDLYDNMISHIKGLEHLSKLTSLDFSF 158
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQ 260
N ++ I+N+ L +L LY +N + IE L ++L L++A NKI I+N+ L L+
Sbjct: 159 NNIKHIKNISHLVHLKDLYFVQNRIQKIEGLEGLKELRNLELAANKIRDIENLDSLIALE 218
Query: 261 EFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
E W+ N++++ ++ L N L+ I L N
Sbjct: 219 ELWLGKNKITEIKNIDALAN---LKIISLPSN 247
>gi|294656646|ref|XP_458939.2| DEHA2D10934p [Debaryomyces hansenii CBS767]
gi|199431629|emb|CAG87099.2| DEHA2D10934p [Debaryomyces hansenii CBS767]
Length = 373
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/265 (47%), Positives = 177/265 (66%), Gaps = 8/265 (3%)
Query: 61 IERLLLRWNLIKKIENIHMLT--TLKELELYDNQLTVIEN-LDTLINLEILDLSFNRIRE 117
+E L LR NLI + + +L TL+EL+ YDN++ I + + L NL LDLSFN+I+
Sbjct: 105 LESLCLRQNLITSMVEVKVLPGETLQELDFYDNRINHISSQISKLTNLTNLDLSFNKIKN 164
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII-ENLDGLTNLEELYL 176
IK L+ L LE LY NKI I+N++ L+ LK LELG NKI +I E LD L NL++L+L
Sbjct: 165 IKNLESLTKLEHLYFVQNKIKDIKNLETLQNLKNLELGGNKIEVISETLDKLVNLQQLWL 224
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEK 236
GKNKI +++N+++LT L +LS+Q NR+ IE LE L NL +LYLS NG+T IENL N
Sbjct: 225 GKNKIEKLENMSNLTNLRVLSIQSNRITKIEGLENLVNLEELYLSHNGITKIENLDKNAN 284
Query: 237 LETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV- 294
L+ LDV N+++ + N+ HLT+L +FW + N++S + + L +L T+Y + N V
Sbjct: 285 LQVLDVTSNRLTTLDNLNHLTKLTDFWCSYNKISSFEEIGKELGKLPELDTVYFEGNLVQ 344
Query: 295 AQDPN-YRRKIKL-VCPWIVQIDAT 317
Q+P YRRKIKL + P + +IDAT
Sbjct: 345 TQNPTAYRRKIKLYLGPSLAKIDAT 369
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 4/127 (3%)
Query: 57 KEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIR 116
K V +++L L N I+K+EN+ LT L+ L + N++T IE L+ L+NLE L LS N I
Sbjct: 215 KLVNLQQLWLGKNKIEKLENMSNLTNLRVLSIQSNRITKIEGLENLVNLEELYLSHNGIT 274
Query: 117 EIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE----NLDGLTNLE 172
+I+ LD ANL+ L + SN+++ ++N++HL KL NKI E L L L+
Sbjct: 275 KIENLDKNANLQVLDVTSNRLTTLDNLNHLTKLTDFWCSYNKISSFEEIGKELGKLPELD 334
Query: 173 ELYLGKN 179
+Y N
Sbjct: 335 TVYFEGN 341
>gi|389637200|ref|XP_003716239.1| protein phosphatase 1 regulatory subunit SDS22 [Magnaporthe oryzae
70-15]
gi|351642058|gb|EHA49920.1| protein phosphatase 1 regulatory subunit SDS22 [Magnaporthe oryzae
70-15]
gi|440475342|gb|ELQ44025.1| protein phosphatase 1 regulatory subunit SDS22 [Magnaporthe oryzae
Y34]
gi|440486198|gb|ELQ66088.1| protein phosphatase 1 regulatory subunit SDS22 [Magnaporthe oryzae
P131]
Length = 381
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/259 (44%), Positives = 176/259 (67%), Gaps = 4/259 (1%)
Query: 64 LLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLD 122
L LR N+I++I+ + L TL+EL+LYDN +T I+ L L L LDLSFN+I+ I+ ++
Sbjct: 121 LCLRQNVIQEIDGLACLAGTLQELDLYDNLITHIKGLGELKALTWLDLSFNKIKRIENVN 180
Query: 123 HLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKIS 182
HL L L+ +NKI IEN++ L KL++LELG N+IR ++NLD L L+ELY+ KNKI+
Sbjct: 181 HLTELTDLFFVANKIRTIENLEGLNKLRMLELGSNRIREMQNLDSLKELQELYVAKNKIT 240
Query: 183 RIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDV 242
++ LA L KL +LS+Q NR++ + L+ + L +LY++ N LT++E L N L+ LDV
Sbjct: 241 QLTGLAGLPKLRLLSIQSNRIQDLSPLKDVHTLEELYITHNALTSLEGLEHNINLKVLDV 300
Query: 243 AYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QDPN- 299
+ N+IS ++ + L EL +FW + NQ++D+ V L++ + L+T+YL+ NP+ + P
Sbjct: 301 SNNQISSLKGLGPLKELTDFWASYNQIADFAEVEKELKDKENLETVYLEGNPLQLRGPAL 360
Query: 300 YRRKIKLVCPWIVQIDATL 318
YR K++L P + QIDAT
Sbjct: 361 YRNKVRLALPQVKQIDATF 379
>gi|126649269|ref|XP_001388306.1| protein phosphatase-1 regulatory subunit 7 alpha2 [Cryptosporidium
parvum Iowa II]
gi|126117400|gb|EAZ51500.1| protein phosphatase-1 regulatory subunit 7 alpha2 [Cryptosporidium
parvum Iowa II]
Length = 340
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 194/295 (65%), Gaps = 10/295 (3%)
Query: 32 QMSLDNP--DEESEAETTESKAEDEESKEVCIE--RLLLRWNLIKKIENIHMLTTLKELE 87
++ +D P D++ E + + E+ C E L+L N I+KI+N+ L LK LE
Sbjct: 30 RIGIDYPVYDDDEEINIQCGRIGEIENLSKCKELRSLMLISNHIRKIKNLDELIQLKTLE 89
Query: 88 LYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLK 147
LY N++ IENL+ L+NLE+LDLSFNRI++++ L++ L+KL+L +NKI I+ +++ K
Sbjct: 90 LYQNKIKKIENLEKLVNLEVLDLSFNRIKKLENLENQNKLKKLFLTNNKIKIIQGLNNNK 149
Query: 148 KLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR--T 205
+LK+LELG N IRIIEN+D L+ LEEL+LGKNKI+ +D++ + I+SLQ NR+ +
Sbjct: 150 ELKLLELGSNDIRIIENIDHLSELEELWLGKNKITTLDDIPLFQNIKIISLQSNRIVNWS 209
Query: 206 IENLEALTNLTQLYLSENGLTTIENLL--SNEKLETLDVAYNKISIIQNIAHLTELQEFW 263
I + + N+ +LYLS+N L + + + S + L+ LD+ NKI ++ I+ + L+E W
Sbjct: 210 INFSKNVNNVQELYLSDNQLISPDEVYFDSFQNLKVLDLGGNKIQNLEAISKIESLEELW 269
Query: 264 INDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ--DPNYRRKIKLVCPWIVQIDA 316
INDN + D N + +L+N + LQT+YL+RNP+ P YR + + PWI Q+DA
Sbjct: 270 INDNDICDINQLELLKNLRNLQTLYLERNPIQNQLGPAYRLTVIKIVPWITQLDA 324
>gi|68469629|ref|XP_721066.1| hypothetical protein CaO19.8440 [Candida albicans SC5314]
gi|68469868|ref|XP_720944.1| hypothetical protein CaO19.820 [Candida albicans SC5314]
gi|46442838|gb|EAL02124.1| hypothetical protein CaO19.820 [Candida albicans SC5314]
gi|46442967|gb|EAL02252.1| hypothetical protein CaO19.8440 [Candida albicans SC5314]
Length = 374
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 124/263 (47%), Positives = 178/263 (67%), Gaps = 6/263 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIEN-LDTLINLEILDLSFNRIREI 118
+E L LR NLI + + L TL+EL+LYDN++ I + + L++L LDLSFNRI+ I
Sbjct: 108 LESLCLRQNLITSMVGVKDLPDTLEELDLYDNRINHISSSIKHLVHLTNLDLSFNRIKNI 167
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
K ++ L LE LY NKI +I+N+D L K+ LELG NKI +IENLD L N+++L+LGK
Sbjct: 168 KNIETLVELENLYFVQNKIREIKNLDTLTKVTNLELGGNKIEVIENLDKLVNIKQLWLGK 227
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N+I ++ N+ +L L +LS+Q NR+ IE LE L NL +LYLS NG++ IENL +N L+
Sbjct: 228 NRIYKLQNMDNLVNLRVLSIQSNRITKIEGLENLKNLEELYLSHNGISEIENLENNINLQ 287
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-Q 296
LDV NKIS ++ ++HL +L +FW + NQVS + + L L+ +Y + NPV Q
Sbjct: 288 VLDVTANKISNLKGLSHLVKLTDFWCSYNQVSSFEEIGKELGKLPDLECVYFEGNPVQLQ 347
Query: 297 DPN-YRRKIKL-VCPWIVQIDAT 317
+P+ YRRK+KL + P + +IDAT
Sbjct: 348 NPSAYRRKMKLYLGPSLNKIDAT 370
>gi|396479184|ref|XP_003840694.1| hypothetical protein LEMA_P103460.1 [Leptosphaeria maculans JN3]
gi|312217267|emb|CBX97215.1| hypothetical protein LEMA_P103460.1 [Leptosphaeria maculans JN3]
Length = 474
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 124/290 (42%), Positives = 182/290 (62%), Gaps = 8/290 (2%)
Query: 36 DNPDEESEAETTESKAEDEES----KEVCIERLLLRWNLIKKIE-NIHMLTTLKELELYD 90
D P++E E E K D +S + ++RL LR N I+ I TL E++LYD
Sbjct: 161 DTPEDEDEIELVHCKISDMDSLRLERFKQMKRLCLRQNRIESISIPADAADTLTEIDLYD 220
Query: 91 NQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLK 150
N ++ I+NL+ NL LDLSFN+I+ IK ++HL L LY NKI KIEN++ L L+
Sbjct: 221 NLISHIKNLEPFTNLTSLDLSFNKIKHIKRINHLTKLRDLYFVQNKIGKIENLEGLTNLR 280
Query: 151 VLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLE 210
+ELG N++R IE L+ LT LEEL+LGKNKI+ I L +L+ L ILS+Q NRLR++ L
Sbjct: 281 QIELGANRVREIEGLETLTGLEELWLGKNKITEIKGLDTLSNLKILSIQSNRLRSLSGLS 340
Query: 211 ALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
LT+L +L++S N LT++ L SN L +D++ N I + + L LQEFW ++ ++
Sbjct: 341 HLTSLEELHVSHNLLTSLSGLSSNANLRVIDISANPIEHLAGLDGLNHLQEFWASNCKLG 400
Query: 271 DWNTVNV-LENNKQLQTIYLDRNPVA-QDPN-YRRKIKLVCPWIVQIDAT 317
D+ + L + ++L+T+Y + NP+ Q P YR KI+L P +VQIDA+
Sbjct: 401 DFREIERELRDKEELETVYFEGNPLQRQQPALYRNKIRLALPRVVQIDAS 450
>gi|146422801|ref|XP_001487335.1| hypothetical protein PGUG_00712 [Meyerozyma guilliermondii ATCC
6260]
gi|146388456|gb|EDK36614.1| hypothetical protein PGUG_00712 [Meyerozyma guilliermondii ATCC
6260]
Length = 374
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 120/264 (45%), Positives = 178/264 (67%), Gaps = 7/264 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIE-NLDTLINLEILDLSFNRIREI 118
++ L LR NL+ + + L T+++L+ YDN++ I N+ L+NL+ LDLSFN+I+ I
Sbjct: 107 LQSLCLRQNLVTSMTGVKDLPDTMEDLDFYDNRINHISSNISKLVNLKSLDLSFNKIKNI 166
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII-ENLDGLTNLEELYLG 177
K ++ L LE LY NKI +I+N+D LK LK LELG NKI I E L L +L +L+LG
Sbjct: 167 KNIEALTQLENLYFVQNKIREIKNLDTLKSLKNLELGGNKIEEINEGLHQLQSLTQLWLG 226
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I ++ NL+SLT L +LS+Q NR+ IE LE L NL +LYLS NG+ IENL +N+ L
Sbjct: 227 KNRIHKLQNLSSLTNLRVLSIQSNRITKIEGLEMLVNLEELYLSHNGIAKIENLDNNKNL 286
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVAQ 296
+ LD+ NK++ + N++HLT+L +FW + NQ+SD+ + L +L T+Y + NP+ +
Sbjct: 287 QVLDMTSNKLTSLDNLSHLTKLTDFWCSYNQISDFEQIRRELGKLPELDTVYFEGNPIQR 346
Query: 297 D-PN-YRRKIKL-VCPWIVQIDAT 317
+ P YRRKI+L + + +IDAT
Sbjct: 347 ENPTAYRRKIRLNLGSSLTKIDAT 370
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 76/151 (50%), Gaps = 27/151 (17%)
Query: 60 CIERLLLRWNLIKKI-ENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
++ L L N I++I E +H L +L +L L N++ ++NL +L NL +L + NRI +I
Sbjct: 196 SLKNLELGGNKIEEINEGLHQLQSLTQLWLGKNRIHKLQNLSSLTNLRVLSIQSNRITKI 255
Query: 119 KGLDHLANLEKLYLCSNKISKIENVD----------------------HLKKLKVLELGD 156
+GL+ L NLE+LYL N I+KIEN+D HL KL
Sbjct: 256 EGLEMLVNLEELYLSHNGIAKIENLDNNKNLQVLDMTSNKLTSLDNLSHLTKLTDFWCSY 315
Query: 157 NKI----RIIENLDGLTNLEELYLGKNKISR 183
N+I +I L L L+ +Y N I R
Sbjct: 316 NQISDFEQIRRELGKLPELDTVYFEGNPIQR 346
>gi|241951250|ref|XP_002418347.1| leucine-ruch repeat protein, hypothetical; protein phosphatase 1
regulatory subunit, putative [Candida dubliniensis CD36]
gi|223641686|emb|CAX43647.1| leucine-ruch repeat protein, hypothetical [Candida dubliniensis
CD36]
Length = 373
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 122/263 (46%), Positives = 178/263 (67%), Gaps = 6/263 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIEN-LDTLINLEILDLSFNRIREI 118
+E L LR NLI + + L +L+EL+LYDN++ I + + L++L+ LDLSFNRI+ I
Sbjct: 107 LESLCLRQNLITSMVGVKDLPESLEELDLYDNRINHISSSIKHLVHLKNLDLSFNRIKNI 166
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
K ++ L LE LY NKI +I+N+D L K+ LELG NKI +IENLD L N+ +L+LGK
Sbjct: 167 KNIETLVELENLYFVQNKIREIKNLDTLTKVTNLELGGNKIEVIENLDKLVNINQLWLGK 226
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N+I ++ N+ +L L +LS+Q NR+ IE LE L NL +LYLS NG++ IENL +N L+
Sbjct: 227 NRIHKLQNMDNLVNLRVLSIQSNRITKIEGLENLKNLEELYLSHNGISEIENLENNTNLQ 286
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-Q 296
LDV NKI+ ++ ++HL +L +FW + NQVS + + L L+ +Y + NPV Q
Sbjct: 287 VLDVTANKITNLKGLSHLVKLTDFWCSYNQVSSFEEIGKELGKLPDLECVYFEGNPVQLQ 346
Query: 297 DPN-YRRKIKL-VCPWIVQIDAT 317
+P+ YRRK+KL + P + +IDAT
Sbjct: 347 NPSAYRRKMKLYLGPTLNKIDAT 369
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 57 KEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIR 116
K V I +L L N I K++N+ L L+ L + N++T IE L+ L NLE L LS N I
Sbjct: 215 KLVNINQLWLGKNRIHKLQNMDNLVNLRVLSIQSNRITKIEGLENLKNLEELYLSHNGIS 274
Query: 117 EIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE----NLDGLTNLE 172
EI+ L++ NL+ L + +NKI+ ++ + HL KL N++ E L L +LE
Sbjct: 275 EIENLENNTNLQVLDVTANKITNLKGLSHLVKLTDFWCSYNQVSSFEEIGKELGKLPDLE 334
Query: 173 ELYLGKNKI 181
+Y N +
Sbjct: 335 CVYFEGNPV 343
>gi|330802221|ref|XP_003289118.1| hypothetical protein DICPUDRAFT_79885 [Dictyostelium purpureum]
gi|325080845|gb|EGC34384.1| hypothetical protein DICPUDRAFT_79885 [Dictyostelium purpureum]
Length = 325
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 119/256 (46%), Positives = 169/256 (66%), Gaps = 4/256 (1%)
Query: 67 RWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH--L 124
R NLI+KIENI L +++E++LYDN++ VIEN+ L +L DLSFN IR I+ L L
Sbjct: 68 RQNLIEKIENIDQLESVQEIDLYDNKIEVIENVKDLKSLTYFDLSFNGIRVIENLHSKDL 127
Query: 125 ANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRI 184
+++L+L +NKI KIE +D L LK LELG N++R IENL+ L N+E L+LG+NKI I
Sbjct: 128 PIIKELFLANNKIVKIEGLDELTTLKNLELGSNRLRDIENLNALINIETLWLGRNKIVEI 187
Query: 185 DNLASLTKLNILSLQCNRLRTIEN-LEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ L+KL ILS+Q NRL I N L L +LT+LYLS NG+T I+ L + ++L TLD++
Sbjct: 188 KGINHLSKLKILSIQSNRLTEIGNGLVGLNSLTELYLSHNGITNIDGLQTLKQLRTLDIS 247
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRK 303
NKI + + L +L+E W NDN V + + + K ++ +Y +RNPVAQ P YRR
Sbjct: 248 GNKIQKLVGLDQLPDLEELWCNDNLVDSVDNIEQ-QVTKTIKCVYFERNPVAQHPQYRRI 306
Query: 304 IKLVCPWIVQIDATLA 319
+ P + Q+DA+
Sbjct: 307 FINMFPVLKQLDASFV 322
>gi|390469449|ref|XP_003734114.1| PREDICTED: LOW QUALITY PROTEIN: protein phosphatase 1 regulatory
subunit 7-like [Callithrix jacchus]
Length = 387
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 164/247 (66%), Gaps = 21/247 (8%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L NLIK IEN+ L +L+EL+LY++Q+ ENL+ L LEIL + FN +R I+G
Sbjct: 94 VKTLCLCQNLIKCIENLEELQSLRELDLYNDQIKETENLEALTELEILAIYFNLLRNIEG 153
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L +L++LELG N IR IEN++ LTNLE L+LGK+K
Sbjct: 154 VDKLTQLKKLFLVNNKISKIENLSNLHQLQMLELGSNCIRAIENINTLTNLESLFLGKSK 213
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+++ NL +LT L +LS+ N+L IE L+ L NL +LYLS NG+ IE L +N KL L
Sbjct: 214 ITKLQNLDALTNLTVLSMHSNQLTKIEGLQNLVNLXELYLSHNGIEVIEGLENNNKLIML 273
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
D+A N+I I+N++HLTEL+ T+ L++NP+ +DP Y
Sbjct: 274 DIASNRIKKIENVSHLTELK---------------------GACXTVCLEQNPLQKDPQY 312
Query: 301 RRKIKLV 307
RK+ L
Sbjct: 313 HRKVMLA 319
>gi|342321620|gb|EGU13553.1| Protein phosphatase 1 regulatory subunit 7 [Rhodotorula glutinis
ATCC 204091]
Length = 480
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 120/251 (47%), Positives = 154/251 (61%), Gaps = 13/251 (5%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLD--------HLANLEKLY 131
L L+EL+LYDN L ++ L+ L +LE LDLSFN +R + D L LY
Sbjct: 227 LKELEELDLYDNSLKSVKGLEGLDSLESLDLSFNLLRSVAPFDDASPNSPYAFPRLNHLY 286
Query: 132 LCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLT 191
L NK++KIE V L LE G N+IR IENL NL L+LGKNKI++I+NL LT
Sbjct: 287 LIQNKLTKIEGVKDRTNLTYLEYGGNRIRTIENLPISANLRSLFLGKNKITKIENLEGLT 346
Query: 192 KLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKI--SI 249
L LS+Q NRL IE L+ALT L +LYLS NGLT IE L KL TLDV NKI +
Sbjct: 347 GLRTLSIQSNRLTKIEGLDALTELEELYLSHNGLTKIEGLRKLTKLTTLDVGNNKIVEAS 406
Query: 250 IQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD--PNYRRKIKLV 307
+ +A LTEL+EFW N+N++ ++ ++ L TIYL+ NP+ ++ YRRKI L
Sbjct: 407 AEELAPLTELEEFWANNNELHAIPSLPP-SSHPNLSTIYLEGNPLQKELGTAYRRKIMLE 465
Query: 308 CPWIVQIDATL 318
CP + QIDAT
Sbjct: 466 CPQVQQIDATF 476
>gi|321257813|ref|XP_003193717.1| nuclear regulatory subunit of Glc7p type 1 protein serine-threonine
phosphatase (PP1); Sds22p [Cryptococcus gattii WM276]
gi|317460187|gb|ADV21930.1| Nuclear regulatory subunit of Glc7p type 1 protein serine-threonine
phosphatase (PP1), putative; Sds22p [Cryptococcus gattii
WM276]
Length = 374
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/269 (47%), Positives = 170/269 (63%), Gaps = 12/269 (4%)
Query: 61 IERLLLRWNLIKKI---ENIHMLTTLKELELYDNQLTVI---ENLDTLINLEILDLSFNR 114
++RL LR N + E L L EL+ YDN+L + E L N+ LDLSFN
Sbjct: 102 LKRLCLRQNELTSPLPSEAFTNLAELGELDFYDNRLGPLVRDEELAGCPNISTLDLSFNN 161
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIEN--VDHLKK-LKVLELGDNKIRIIENLDGLTNL 171
IR L L N++ LYL NKIS++E +D ++ +K LELG N+IR I NLD L +L
Sbjct: 162 IRHAPSLPSLKNVDTLYLVQNKISRLEEGELDWCQETMKSLELGGNRIRAIGNLDKLIHL 221
Query: 172 EELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
EEL+LGKNKI ++NL++ + L ILSLQ NR+ +ENLE L NL +LYLS NGL IE L
Sbjct: 222 EELWLGKNKIRVLENLSTFSSLRILSLQSNRITKLENLEGLVNLEELYLSHNGLQKIEGL 281
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLD 290
+N KL TLDV N I I+N++HL+ L+EFW ++NQ++ + + + L L TIYL+
Sbjct: 282 HNNIKLTTLDVGNNFIKEIENLSHLSNLEEFWASNNQITSLHALESELRPLTNLCTIYLE 341
Query: 291 RNPVAQD--PNYRRKIKLVCPWIVQIDAT 317
NP ++ NYRRKI L P + QIDAT
Sbjct: 342 GNPCQKEDMSNYRRKIMLSLPQVKQIDAT 370
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 81/167 (48%), Gaps = 40/167 (23%)
Query: 57 KEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIR 116
K + +E L L N I+ +EN+ ++L+ L L N++T +ENL+ L+NL
Sbjct: 217 KLIHLEELWLGKNKIRVLENLSTFSSLRILSLQSNRITKLENLEGLVNL----------- 265
Query: 117 EIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYL 176
E+LYL N + KIE + + KL L++G+N I+ IENL L+NLEE +
Sbjct: 266 -----------EELYLSHNGLQKIEGLHNNIKLTTLDVGNNFIKEIENLSHLSNLEEFWA 314
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
N+I+ + L S L LTNL +YL N
Sbjct: 315 SNNQITSLHALES------------------ELRPLTNLCTIYLEGN 343
>gi|255714210|ref|XP_002553387.1| KLTH0D15576p [Lachancea thermotolerans]
gi|238934767|emb|CAR22949.1| KLTH0D15576p [Lachancea thermotolerans CBS 6340]
Length = 344
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/305 (44%), Positives = 196/305 (64%), Gaps = 29/305 (9%)
Query: 41 ESEAETTESKAEDEES-----------KEVCIER------LLLRWNLIKKIENIHMLT-- 81
E++AE T+ +D E+ +++ ++R L LR NLI+ + + +L
Sbjct: 37 EADAELTQDLPDDTEAIDLVHLRIRSMEDLGLQRFTKLRSLCLRQNLIESMSEVDVLPPE 96
Query: 82 TLKELELYDNQLTVIE-NLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKI 140
T+ +++LYDN++ I N+ L NLE LDLSFN+I+ IK L+ L LE L+ NKISK+
Sbjct: 97 TMVDIDLYDNKIKHISSNIGKLTNLESLDLSFNKIKHIKNLEALVKLENLFFVQNKISKV 156
Query: 141 ENVDHLKKLKVLELGDNKIRIIE--NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSL 198
EN+ LK L+ LELG N+I IE +L GLTNLEE++LGKN I+R++NL LT+L ILS+
Sbjct: 157 ENLGSLKALRNLELGGNQIHEIEEDSLKGLTNLEEIWLGKNMITRLNNLHHLTQLRILSI 216
Query: 199 QCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
Q NRL IE LE LTNL +LYLS N + IE L N KL TLD+ NKI+ ++N+ HLT+
Sbjct: 217 QSNRLTKIEGLENLTNLEELYLSHNYIKKIEGLDKNMKLTTLDITSNKITKVENVHHLTQ 276
Query: 259 LQEFWINDNQVSDWNTVNVLENNKQL---QTIYLDRNPV--AQDPNYRRKIKL-VCPWIV 312
L + W++ NQ+ D + ++ E K+L +TIYL+ NP+ + YRRK+ L + +
Sbjct: 277 LTDLWLSFNQI-DQSFESLGEELKELPAFETIYLEGNPIQTKNETTYRRKLVLNLGSSLQ 335
Query: 313 QIDAT 317
+IDAT
Sbjct: 336 KIDAT 340
>gi|326474602|gb|EGD98611.1| protein phosphatase PP1 regulatory subunit Sds22 [Trichophyton
tonsurans CBS 112818]
gi|326485496|gb|EGE09506.1| protein phosphatase PP1 regulatory subunit Sds22 [Trichophyton
equinum CBS 127.97]
Length = 341
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/261 (48%), Positives = 182/261 (69%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
IE++ LR N I +I ++ TLKEL+LYDN ++ ++ LD ++NL LDLSFN I+ IK
Sbjct: 77 IEKICLRQNQITRIYLPDNLAPTLKELDLYDNNISHVKGLDHVVNLTSLDLSFNDIKHIK 136
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ L +L+ LY N+I IE ++ LK+L+ LELG NKIR I+NLD LT LEEL+LGKN
Sbjct: 137 NISTLVHLKDLYFIQNRIQTIEGLEELKELRNLELGANKIREIDNLDTLTALEELWLGKN 196
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KIS I N++SLT L ILS+ NR+ T+ LE+L++L +LYLS+N LT I L SN L
Sbjct: 197 KISEIKNISSLTNLKILSIPSNRIETLSGLESLSSLEELYLSDNLLTGISGLESNANLRV 256
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV--AQ 296
LD++ NK+S ++N++HLT+L+E W ++NQ+S + V L++ ++L T+Y + NP+ A
Sbjct: 257 LDISNNKVSRLENLSHLTKLEELWASNNQLSSFEEVERELKDKEELNTVYFEGNPLQKAA 316
Query: 297 DPNYRRKIKLVCPWIVQIDAT 317
YR K++L P I QIDAT
Sbjct: 317 PALYRNKVRLALPQIKQIDAT 337
>gi|238882185|gb|EEQ45823.1| protein phosphatases PP1 regulatory subunit SDS22 [Candida albicans
WO-1]
Length = 374
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/263 (46%), Positives = 178/263 (67%), Gaps = 6/263 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIEN-LDTLINLEILDLSFNRIREI 118
+E L LR NLI + + L TL+EL+LYDN++ I + + L++L LDLSFNRI+ I
Sbjct: 108 LESLCLRQNLITSMVGVKDLPDTLEELDLYDNRINHISSSIKHLVHLTNLDLSFNRIKNI 167
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
K ++ L LE LY NKI +I+N+D L K+ LELG NKI +IENLD L N+++L+LGK
Sbjct: 168 KNIETLVELENLYFVQNKIREIKNLDTLTKVTNLELGGNKIEVIENLDKLVNIKQLWLGK 227
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N+I ++ N+ +L L +LS+Q NR+ IE LE L NL +LYLS NG++ I+NL +N L+
Sbjct: 228 NRIYKLQNMDNLVNLRVLSIQSNRITKIEGLENLKNLEELYLSHNGISEIKNLENNINLQ 287
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-Q 296
LDV NKIS ++ ++HL +L +FW + NQVS + + L L+ +Y + NPV Q
Sbjct: 288 VLDVTANKISNLKGLSHLVKLTDFWCSYNQVSSFEEIGKELGKLPDLECVYFEGNPVQLQ 347
Query: 297 DPN-YRRKIKL-VCPWIVQIDAT 317
+P+ YRRK+KL + P + +IDAT
Sbjct: 348 NPSAYRRKMKLYLGPSLNKIDAT 370
>gi|448512118|ref|XP_003866681.1| Sds22 serine-threonine phosphatase [Candida orthopsilosis Co
90-125]
gi|380351019|emb|CCG21242.1| Sds22 serine-threonine phosphatase [Candida orthopsilosis Co
90-125]
Length = 370
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/263 (45%), Positives = 175/263 (66%), Gaps = 6/263 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIEN-LDTLINLEILDLSFNRIREI 118
+E L LR NL+ + + ++ TL+EL+ YDN++ I + + L L+ LDLSFN I+ I
Sbjct: 104 LESLCLRQNLLTSMVGVKDISPTLEELDFYDNRINHISSSIKHLTKLQNLDLSFNTIKNI 163
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
K ++ L NLE LY +NKI +I+N++ L KL LELG NKI +IENLD L N+ +L+LGK
Sbjct: 164 KNIETLVNLENLYFVANKIKEIKNLESLTKLVNLELGGNKIEVIENLDNLVNITQLWLGK 223
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N+I ++ NL SL L +LS+Q NR+R IE L+ L NL +LYLS NG+ IENL +N L+
Sbjct: 224 NRIHKLQNLDSLVNLRVLSIQSNRIRKIEGLDNLKNLEELYLSHNGIEKIENLENNTNLQ 283
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQ 296
LDV NK++ + + HLT+L +FW + NQVS + V + L+ +Y + NP+ +
Sbjct: 284 VLDVTSNKLTELSGLKHLTKLTDFWCSYNQVSSFENVGKEMGKLSDLECVYFEGNPIQTE 343
Query: 297 DPN-YRRKIKL-VCPWIVQIDAT 317
+P YRRK+KL + P + +IDAT
Sbjct: 344 NPTAYRRKLKLYLGPSLNKIDAT 366
>gi|58266084|ref|XP_570198.1| enzyme regulator [Cryptococcus neoformans var. neoformans JEC21]
gi|57226431|gb|AAW42891.1| enzyme regulator, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 374
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/269 (47%), Positives = 170/269 (63%), Gaps = 12/269 (4%)
Query: 61 IERLLLRWN-LIKKIENIHM--LTTLKELELYDNQLTVI---ENLDTLINLEILDLSFNR 114
++RL LR N L + + LT L+EL+ YDN+L E L N+ LDLSFN
Sbjct: 102 LKRLCLRQNELTSPLPSGAFANLTELEELDFYDNRLGPHVRDEELAGCPNISTLDLSFNN 161
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIEN--VDHLK-KLKVLELGDNKIRIIENLDGLTNL 171
IR L L ++ LYL NKIS++E +D + +K LELG N+IR+IENLD L +L
Sbjct: 162 IRHAPSLPSLQHVNTLYLVQNKISRLEKGELDWCQDTMKSLELGGNRIRVIENLDKLIHL 221
Query: 172 EELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
+EL+LGKNKI ++NL++ + L ILSLQ NR+ +ENLE L NL +LYLS NGL IE L
Sbjct: 222 QELWLGKNKIRVLENLSTFSSLRILSLQSNRITKLENLEGLVNLEELYLSHNGLQKIEGL 281
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLD 290
N KL TLDV N I I+N++HL+ L+EFW ++NQ+ + + + L L TIYL+
Sbjct: 282 HHNIKLTTLDVGNNFIKEIENLSHLSNLEEFWASNNQIGSLHALESELRPLTNLCTIYLE 341
Query: 291 RNPVAQD--PNYRRKIKLVCPWIVQIDAT 317
NP ++ NYRRKI L P + QIDAT
Sbjct: 342 GNPCQKEDMGNYRRKIMLALPQVKQIDAT 370
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 40/167 (23%)
Query: 57 KEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIR 116
K + ++ L L N I+ +EN+ ++L+ L L N++T +ENL+ L+NLE L LS N ++
Sbjct: 217 KLIHLQELWLGKNKIRVLENLSTFSSLRILSLQSNRITKLENLEGLVNLEELYLSHNGLQ 276
Query: 117 EIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYL 176
+I+GL H N+ KL L++G+N I+ IENL L+NLEE +
Sbjct: 277 KIEGLHH------------------NI----KLTTLDVGNNFIKEIENLSHLSNLEEFWA 314
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
N+I + L S L LTNL +YL N
Sbjct: 315 SNNQIGSLHALES------------------ELRPLTNLCTIYLEGN 343
>gi|448088777|ref|XP_004196630.1| Piso0_003852 [Millerozyma farinosa CBS 7064]
gi|448092937|ref|XP_004197661.1| Piso0_003852 [Millerozyma farinosa CBS 7064]
gi|359378052|emb|CCE84311.1| Piso0_003852 [Millerozyma farinosa CBS 7064]
gi|359379083|emb|CCE83280.1| Piso0_003852 [Millerozyma farinosa CBS 7064]
Length = 375
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/270 (46%), Positives = 175/270 (64%), Gaps = 8/270 (2%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLT--TLKELELYDNQLT-VIENLDTLINLEILDLSF 112
SK +E L LR NL+ I I L T++EL+ YDN++ + ++ NL LDLSF
Sbjct: 102 SKFQKLESLCLRQNLLTSISAIKDLPADTVEELDFYDNRIDHITSSMTRFKNLVNLDLSF 161
Query: 113 NRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIR-IIENLDGLTNL 171
N I+ IK LD L LE LY N+I I+N++ L+ LK LELG NKI I E + L NL
Sbjct: 162 NNIKNIKNLDTLVKLENLYFVQNRIKVIKNLEGLQSLKNLELGGNKIEEISETMRSLPNL 221
Query: 172 EELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
E+L+LGKNKISR+ NL L L +LS+Q NR+ IE LE + NL +LYL NG++ IENL
Sbjct: 222 EQLWLGKNKISRLMNLDKLANLRVLSIQANRITKIEGLEGMVNLEELYLLHNGISKIENL 281
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLD 290
+N+ L+ LDV N+IS ++N++HLT+L +FW + NQVS + + L +L T+Y +
Sbjct: 282 DNNKNLKVLDVTSNRISKLENLSHLTQLTDFWCSYNQVSSFEEIGKELGKLPELDTVYFE 341
Query: 291 RNPV-AQDPN-YRRKIKL-VCPWIVQIDAT 317
NPV + +P YRRK++L + P + +IDAT
Sbjct: 342 GNPVQSSNPTAYRRKLRLYLGPSLTKIDAT 371
>gi|388583059|gb|EIM23362.1| L domain-like protein [Wallemia sebi CBS 633.66]
Length = 283
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 166/241 (68%), Gaps = 6/241 (2%)
Query: 83 LKELELYDNQLTV--IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKI 140
L+E++LYDN+++ + NL L NL+ILDLSFN IR IK ++ L L++LYL NKI I
Sbjct: 45 LEEIDLYDNKISDDNLVNLTNLSNLKILDLSFNLIRSIKDIEKLP-LKELYLVQNKIVDI 103
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
N++ + L++LELG N+IR I+NLD L+NL EL+LGKNKI+ I N+ +L+ L ILSLQ
Sbjct: 104 SNLN-IPTLELLELGGNRIRTIQNLDYLSNLRELWLGKNKITEIANMDNLSNLRILSLQA 162
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQ 260
NR+ I L+ LTNL +LYLS N L++++ L + +L TLD+A+NKI I N+ HL L+
Sbjct: 163 NRISDITGLDGLTNLEELYLSHNNLSSLQGLDNLTQLNTLDIAHNKIETISNVKHLKNLK 222
Query: 261 EFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPN--YRRKIKLVCPWIVQIDATL 318
EFW N N+++ + + L+TIYL+ NPV Q N YR K+KL P + QIDATL
Sbjct: 223 EFWANSNKITSLEEIESEFKDTPLETIYLEHNPVQQTLNTQYRLKLKLALPQLKQIDATL 282
Query: 319 A 319
Sbjct: 283 T 283
>gi|354546552|emb|CCE43284.1| hypothetical protein CPAR2_209290 [Candida parapsilosis]
Length = 372
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/263 (46%), Positives = 173/263 (65%), Gaps = 6/263 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIEN-LDTLINLEILDLSFNRIREI 118
+E L LR NLI I + ++ TL+EL+ YDN++ I + + L L+ LDLSFN I+ I
Sbjct: 106 LESLCLRQNLITSIVGVKDISPTLEELDFYDNRINHISSSIKHLTKLQNLDLSFNTIKNI 165
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
K ++ L NLE LY +NKI +I+N+ L KL LELG NKI +IENL+ L N+ +L+LGK
Sbjct: 166 KNIETLVNLENLYFVANKIKEIKNLGTLTKLVNLELGGNKIEVIENLENLVNITQLWLGK 225
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N+I ++ NL +L L +LS+Q NR+R IE LE L +L +LYLS NG+ IENL +N L+
Sbjct: 226 NRIHKLQNLDALVNLRVLSIQSNRIRKIEGLENLKSLEELYLSHNGIEKIENLETNTNLQ 285
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQ 296
LDV NKI + + HLT+L +FW + NQVS + V L L+ +Y + NP+ +
Sbjct: 286 VLDVTSNKIKELSGLKHLTKLTDFWCSYNQVSSFENVGKELGKLPDLECVYFEGNPIQTE 345
Query: 297 DPN-YRRKIKL-VCPWIVQIDAT 317
+P YRRK+KL + P + +IDAT
Sbjct: 346 NPTAYRRKLKLYLGPSLNKIDAT 368
>gi|328869845|gb|EGG18220.1| Protein phosphatase 1 [Dictyostelium fasciculatum]
Length = 365
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/285 (43%), Positives = 179/285 (62%), Gaps = 6/285 (2%)
Query: 38 PDEESEAETTESKAEDEES--KEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTV 95
PD ++ + T K E+ V +++L LR N+I+ IEN+ L +L EL+LYDNQ+
Sbjct: 77 PDTLTDIDLTNDKIPKIENINHLVQLKKLCLRQNMIQVIENVDTLVSLVELDLYDNQIKK 136
Query: 96 IENLDTLINLEILDLSFNRIREIKGL--DHLANLEKLYLCSNKISKIENVDHLKKLKVLE 153
IEN++ L NL LD+SFN +R I+ L L L++LYL +NKIS++EN+ L +K LE
Sbjct: 137 IENINNLPNLTYLDISFNELRVIENLTSKQLPILKELYLANNKISEMENLSELTGIKCLE 196
Query: 154 LGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTI-ENLEAL 212
LG N+ R I+NL+ L N+E L+LG+NKI+ I N+ + L ILSLQ NRL I L L
Sbjct: 197 LGSNRFREIKNLNELINVETLWLGRNKITTISNINHMANLRILSLQSNRLTEIGPGLAGL 256
Query: 213 TNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDW 272
T LT+LYLS NG+T ++ L + L+ LD++ N++ + I L L+E W NDN V D
Sbjct: 257 TKLTELYLSHNGITNVDGLQTLTSLQILDISANQVQTLVGIDKLINLEELWCNDNLVEDM 316
Query: 273 NTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDAT 317
+ + + NK + +Y +RNPVA+ YRR + P + Q+DAT
Sbjct: 317 DMIEQ-QINKNVTCLYFERNPVAKHQQYRRIFINIFPKLKQLDAT 360
>gi|296818293|ref|XP_002849483.1| protein phosphatases PP1 regulatory subunit sds22 [Arthroderma otae
CBS 113480]
gi|238839936|gb|EEQ29598.1| protein phosphatases PP1 regulatory subunit sds22 [Arthroderma otae
CBS 113480]
Length = 344
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 138/322 (42%), Positives = 200/322 (62%), Gaps = 9/322 (2%)
Query: 6 VPNTDEVDNDNLVTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEES----KEVCI 61
V N D D +EA E G + +D D+ E S+ +S + I
Sbjct: 22 VLNNPHGDIDGPTPEEIEADEGI-GTHLLVDLEDDADEIYLVHSRVSSMKSLKLERFTHI 80
Query: 62 ERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
E++ LR N I +I +++ TL EL+LYDN ++ ++ LD L+NL LDLSFN I+ IK
Sbjct: 81 EKICLRQNQITRIYLPDNLVPTLMELDLYDNNISHVKGLDHLVNLTSLDLSFNDIKHIKN 140
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ L +L+ LY N+I IE ++ K+L+ LELG NKIR I+NLD LT LEEL+LGKNK
Sbjct: 141 ISTLVHLKDLYFIQNRIQTIEGLEEFKELRNLELGANKIREIDNLDNLTALEELWLGKNK 200
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS I N++SLT L ILSL NR+ TI LE+L++L +LYLS+N LT I L +N L L
Sbjct: 201 ISEIKNISSLTNLKILSLPSNRIETISGLESLSSLEELYLSDNLLTGISGLENNSSLRIL 260
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV--AQD 297
D++ NK+S ++N++HL +L+E W ++NQ++ + V L++ ++L T+Y + NP+ A
Sbjct: 261 DISNNKVSRLENLSHLPKLEELWASNNQLASFEEVERELKDKEELNTVYFEGNPLQKASP 320
Query: 298 PNYRRKIKLVCPWIVQIDATLA 319
YR K++L P I QIDAT
Sbjct: 321 ALYRNKVRLALPQIKQIDATFV 342
>gi|302660773|ref|XP_003022062.1| hypothetical protein TRV_03803 [Trichophyton verrucosum HKI 0517]
gi|291185989|gb|EFE41444.1| hypothetical protein TRV_03803 [Trichophyton verrucosum HKI 0517]
Length = 378
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 127/261 (48%), Positives = 180/261 (68%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
IER+ LR N I +I ++ TLKEL+LYDN ++ ++ LD ++NL LDLSFN I+ IK
Sbjct: 77 IERICLRQNQITRIYLPDNLAPTLKELDLYDNNISHVKGLDHVVNLTSLDLSFNDIKHIK 136
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ L +L LY N+I IE ++ LK+L+ LELG NKIR I+NLD L LEEL+LGKN
Sbjct: 137 NISTLVHLRDLYFIQNRIQTIEGLEELKELRNLELGANKIREIDNLDTLIALEELWLGKN 196
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KIS I N++SLT L ILS+ NR+ T+ LE+L++L +LYLS+N LT I L SN L
Sbjct: 197 KISEIKNISSLTNLKILSIPSNRIETLSGLESLSSLEELYLSDNLLTGISGLESNANLRV 256
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV--AQ 296
LD++ NK+S ++N++HLT+L+E W ++NQ+S + V L++ ++L T+Y + NP+ A
Sbjct: 257 LDISNNKVSRLENLSHLTKLEELWASNNQLSSFEEVERELKDKEELNTVYFEGNPLQKAA 316
Query: 297 DPNYRRKIKLVCPWIVQIDAT 317
YR K++L P I QIDAT
Sbjct: 317 PALYRNKVRLALPQIKQIDAT 337
>gi|395332266|gb|EJF64645.1| L domain-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 377
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 126/298 (42%), Positives = 183/298 (61%), Gaps = 16/298 (5%)
Query: 36 DNPDEESEAETTESKAEDEESKEVCIER-------LLLRWNLIKKI--ENIHMLTTLKEL 86
D PDE ++ E S+ ++ ++R L LR N I + E LT L++L
Sbjct: 73 DLPDETTDIELIHSRLNSNSVSKLGLQRFGPHLKRLCLRQNFISHLDPEIFGALTKLEDL 132
Query: 87 ELYDNQLT-VIENLDTLINLEILDLSFNRIREIKGL--DHLANLEKLYLCSNKISKIENV 143
+ YDN++ V L+ + NL LDLSFN I+ I HL +L ++ N+IS I N+
Sbjct: 133 DFYDNKIKHVGTALNNMTNLTTLDLSFNLIKHIPEEIEKHLTSLTTIFFVQNRISHIANL 192
Query: 144 DHLKK-LKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
L L+ +ELG N++R +E L+ L NLEEL++GKNKI++++NL +L KL ILS+Q NR
Sbjct: 193 SGLAANLRSIELGGNRLRKLEGLEALVNLEELWVGKNKITKLENLDTLKKLRILSIQSNR 252
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ IE LE L NL + Y+S NG+ +E L N KL TLDV N I ++N++HLT L+E
Sbjct: 253 ITKIEGLENLENLEEFYISHNGVQRLEGLEKNIKLRTLDVGNNFIERVENVSHLTSLEEL 312
Query: 263 WINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV--AQDPNYRRKIKLVCPWIVQIDAT 317
WINDN+++ + L++ + L+TIYL+RNPV + YRRKI L+ P I Q+DAT
Sbjct: 313 WINDNKITTLLDLEPQLKHIETLETIYLERNPVQATEGAAYRRKIILLLPQIQQLDAT 370
>gi|255940978|ref|XP_002561258.1| Pc16g09410 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585881|emb|CAP93611.1| Pc16g09410 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 349
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 116/260 (44%), Positives = 171/260 (65%), Gaps = 4/260 (1%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++RL +R N I +I ++ +L EL+LYDN ++ I+ L+ NL LDLSFN+I+ IK
Sbjct: 79 LQRLCMRQNQISRINFPPNVAASLTELDLYDNLISHIKGLEEFHNLTSLDLSFNKIKHIK 138
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL L +++ NKIS+IE ++ L +K LELG NKIR IENL+ LT LEEL+LGKN
Sbjct: 139 NISHLKKLTEIFFVQNKISRIEGLEELTAIKNLELGANKIREIENLETLTALEELWLGKN 198
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI + NL +L+ L I+S+Q NRL I L AL L +LYLS N +T + L SNE L
Sbjct: 199 KIVEMKNLDNLSNLRIISIQSNRLTKITGLSALPKLEELYLSHNAITELAGLESNETLRV 258
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QD 297
LD + N++S +++++ L L+E W ++NQ++ + V L++ ++LQT+Y + NP+
Sbjct: 259 LDFSNNQVSHLEHLSSLKNLEELWGSNNQLASFEEVERELKDKEKLQTVYFEGNPLQLNG 318
Query: 298 PN-YRRKIKLVCPWIVQIDA 316
P YR K++L P I QIDA
Sbjct: 319 PAVYRNKVRLALPNIQQIDA 338
>gi|440636632|gb|ELR06551.1| hypothetical protein GMDG_02185 [Geomyces destructans 20631-21]
Length = 368
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 180/292 (61%), Gaps = 8/292 (2%)
Query: 35 LDNPDEESEAETTESKAEDEES----KEVCIERLLLRWNLIKKIENIHMLT-TLKELELY 89
LD P + E + S+ S + + RL LR N I +IE + L TL++L+ Y
Sbjct: 73 LDEPSDVEEIDCIHSRVASVPSLNLDRFTKLVRLCLRQNAITEIEGLSSLAETLRDLDFY 132
Query: 90 DNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKL 149
DN ++ I+ L+ L NL LDLSFN+I+ IK ++HL L LY NKIS IE +D L +L
Sbjct: 133 DNLISHIKGLEDLTNLTSLDLSFNKIKHIKRVNHLTKLTDLYFVQNKISTIEGLDGLTQL 192
Query: 150 KVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
+ LEL N+IR I+NLD LT LEEL+LGKNKI+ I L+SL+ L ILS+Q NR+R I +L
Sbjct: 193 RNLELAANRIRGIQNLDTLTGLEELWLGKNKITEIKGLSSLSSLKILSIQSNRIREISSL 252
Query: 210 EALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQV 269
E L L +LY+S N L+++ L N KL LD++ N ++ + + HL +L+E W + N++
Sbjct: 253 EDLQTLEELYISNNALSSLTGLEKNHKLRVLDISNNTVASLAGLGHLEQLEELWASYNKI 312
Query: 270 SDWNTVNV-LENNKQLQTIYLDRNPVA--QDPNYRRKIKLVCPWIVQIDATL 318
+ V L + KQL T+Y + NPV Q YR K++L P I QIDAT
Sbjct: 313 DSFVDVEKELADKKQLTTVYFEGNPVQLRQPALYRNKVRLALPQIQQIDATF 364
>gi|156081899|ref|XP_001608442.1| protein phosphatases PP1 regulatory subunit sds22 [Plasmodium vivax
Sal-1]
gi|148801013|gb|EDL42418.1| protein phosphatases PP1 regulatory subunit sds22, putative
[Plasmodium vivax]
Length = 317
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/256 (49%), Positives = 175/256 (68%), Gaps = 8/256 (3%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I+KIEN+ L+ LELY+N + IEN+ L NL+ILDLSFN+IR I+ +D L NLE
Sbjct: 47 NCIEKIENLENNLALENLELYENSIKKIENVCMLTNLKILDLSFNKIRTIENIDTLVNLE 106
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+LYL SNKI+KIEN+ + KKL++LELG NKIR IENL+ L NLEEL+LGKNKI + NL
Sbjct: 107 ELYLSSNKIAKIENLQNCKKLRLLELGYNKIRRIENLESLQNLEELWLGKNKIEEL-NLP 165
Query: 189 SLTKLNILSLQCNRLR--TIENLEALTNLTQLYLSENGLTT-IENLLSNEKLETLDVAYN 245
SL KL LSLQ NRL ++E + + +T+LYLS N L+T IEN+ + L+ D++YN
Sbjct: 166 SLPKLKKLSLQHNRLTNWSVEAIRNIPQVTELYLSYNKLSTIIENVKELKNLKVFDLSYN 225
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDP---NYRR 302
+I I + L L+E W+N+N + V+ L N+ L+T+YL++N + QD +YR
Sbjct: 226 EIENIVTCSELKSLEELWLNNNNIDSIEMVSKLSGNENLKTLYLEKNEI-QDKLKEDYRA 284
Query: 303 KIKLVCPWIVQIDATL 318
+I + P + Q+DA L
Sbjct: 285 QIISILPQLKQLDALL 300
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 89/138 (64%)
Query: 136 KISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNI 195
+I KIENV+ K LK L+L N I IENL+ LE L L +N I +I+N+ LT L I
Sbjct: 26 RIRKIENVEKCKNLKTLQLISNCIEKIENLENNLALENLELYENSIKKIENVCMLTNLKI 85
Query: 196 LSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAH 255
L L N++RTIEN++ L NL +LYLS N + IENL + +KL L++ YNKI I+N+
Sbjct: 86 LDLSFNKIRTIENIDTLVNLEELYLSSNKIAKIENLQNCKKLRLLELGYNKIRRIENLES 145
Query: 256 LTELQEFWINDNQVSDWN 273
L L+E W+ N++ + N
Sbjct: 146 LQNLEELWLGKNKIEELN 163
>gi|398406178|ref|XP_003854555.1| hypothetical protein MYCGRDRAFT_99443 [Zymoseptoria tritici IPO323]
gi|339474438|gb|EGP89531.1| hypothetical protein MYCGRDRAFT_99443 [Zymoseptoria tritici IPO323]
Length = 352
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/260 (43%), Positives = 173/260 (66%), Gaps = 4/260 (1%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++R+ LR N I+KIE +TL+ELELYDN L IE L+ +L LDLS+N+++ IK
Sbjct: 85 LQRICLRQNQIQKIELPDTCASTLEELELYDNLLKHIEGLEPFTSLTTLDLSYNKLKHIK 144
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
++ L L +Y N+ISKIEN++ L L LELG N+IR IE L+ LT LE L+LG+N
Sbjct: 145 HVETLKKLHHIYFVQNRISKIENLEELTNLTYLELGANRIREIEGLETLTKLESLWLGQN 204
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + L++LT L LS+Q NRL +++ +E + LT+LY+S+N +T++E L +N KLE
Sbjct: 205 KITELKGLSTLTNLRTLSIQANRLTSLDGIETIPQLTELYVSDNKITSLEPLKNNTKLEI 264
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVA-QD 297
LD N I ++ + L +L+ W ++ Q+ ++ V VL+N ++L+ +YL+ NP+ Q+
Sbjct: 265 LDFQTNPIKDLKGLEELNDLENVWASNCQIDSFHEVERVLKNKEKLEEVYLEGNPIQRQN 324
Query: 298 PN-YRRKIKLVCPWIVQIDA 316
P YR K++L P I +IDA
Sbjct: 325 PVLYRNKVRLALPQITKIDA 344
>gi|150865169|ref|XP_001384275.2| regulatory subunit for the mitotic function of type I protein
phosphatase [Scheffersomyces stipitis CBS 6054]
gi|149386425|gb|ABN66246.2| regulatory subunit for the mitotic function of type I protein
phosphatase [Scheffersomyces stipitis CBS 6054]
Length = 384
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/319 (40%), Positives = 192/319 (60%), Gaps = 36/319 (11%)
Query: 7 PNTDEVDNDNLVTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIERLLL 66
PNTD +D L+ L + ++++ H + S +E L L
Sbjct: 90 PNTDYID---LIHLKISSLDDLHLERFS-------------------------KLESLCL 121
Query: 67 RWNLIKKIENIHMLT--TLKELELYDNQLTVIEN-LDTLINLEILDLSFNRIREIKGLDH 123
R NL+ I + L T++EL+LYDN++ I + + L+ L+ LDLSFN+I+ IK L+
Sbjct: 122 RQNLLTSIVELDTLPADTMEELDLYDNRINHISSSIKRLVKLKNLDLSFNKIKNIKNLET 181
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII-ENLDGLTNLEELYLGKNKIS 182
L LE LY NKI +I+N++ L LK LELG NKI I ENL+ L NL++L+LGKNKI
Sbjct: 182 LTKLENLYFVQNKIKEIKNLETLTSLKNLELGGNKIEYISENLNTLVNLQQLWLGKNKIH 241
Query: 183 RIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDV 242
+ +N+++L L +LS+Q NR+ IE L+ LTNL +LYLS NG+ IENL N L LDV
Sbjct: 242 KFENMSNLVNLRVLSIQSNRITKIEGLDKLTNLEELYLSHNGIEKIENLDHNTNLNVLDV 301
Query: 243 AYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVAQD--PN 299
NK++ ++N++HLT+L +FW + N ++ + ++ L +L T+Y + NPV
Sbjct: 302 TSNKLTKLENLSHLTKLTDFWCSYNHIATFEEISKELGKLPELDTVYFEGNPVQTQNMTA 361
Query: 300 YRRKIKL-VCPWIVQIDAT 317
YRRK+KL + P + +IDAT
Sbjct: 362 YRRKLKLNLGPSLTKIDAT 380
>gi|146332551|gb|ABQ22781.1| phosphatase 1 regulatory subunit 7 protein-like protein [Callithrix
jacchus]
Length = 173
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 128/171 (74%)
Query: 149 LKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIEN 208
L++LELG N+IR IEN+D LTNLE L+LGKNKI+++ NL +LT L +LS+Q NRL IE
Sbjct: 1 LQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEG 60
Query: 209 LEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQ 268
L+ L NL +LYLS NG+ IE L +N KL LD+A N+I I+NI+HLTELQEFW+NDN
Sbjct: 61 LQNLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNL 120
Query: 269 VSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDATLA 319
+ W+ ++ L+ + L+T+YL+RNP+ +DP YRRK+ L P + QIDAT
Sbjct: 121 LESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQIDATFV 171
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 85/139 (61%), Gaps = 3/139 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I+ IENI LT L+ L L N++T ++NLD L NL +L + NR+ +I+GL +L NL
Sbjct: 9 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 68
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI---SRID 185
+LYL N I IE +++ KL +L++ N+I+ IEN+ LT L+E ++ N + S +D
Sbjct: 69 ELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLD 128
Query: 186 NLASLTKLNILSLQCNRLR 204
L L + L+ N L+
Sbjct: 129 ELKGARSLETVYLERNPLQ 147
>gi|209877290|ref|XP_002140087.1| protein phosphatase 1 regulatory subunit 7 [Cryptosporidium muris
RN66]
gi|209555693|gb|EEA05738.1| protein phosphatase 1 regulatory subunit 7, putative
[Cryptosporidium muris RN66]
Length = 327
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/262 (45%), Positives = 177/262 (67%), Gaps = 6/262 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L+L N I+KIEN++ L +L LELY N + IE+LD LINLE+LDLSFN+IR+++
Sbjct: 54 LKALILISNHIEKIENLNELKSLNILELYQNSIRKIEDLDELINLEVLDLSFNKIRKVEN 113
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L NL KL+L SN+IS IE ++ KL +LELG N+IR I N++ L LEEL+LG+NK
Sbjct: 114 LGNLRNLRKLFLSSNRISIIEGLNSNTKLTLLELGGNRIRHIGNIEHLIQLEELWLGRNK 173
Query: 181 ISRIDNLASLTKLNILSLQCNRLR--TIENLEALTNLTQLYLSENGLTT--IENLLSNEK 236
I+ ++L +L KL LSLQ NRL + NL +LYLS N L + I + ++
Sbjct: 174 ITNFESLPNLVKLKSLSLQSNRLSEWALSFQHKCCNLKELYLSHNKLPSPPIGYFKNFKQ 233
Query: 237 LETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ 296
L TLD+A N+IS ++ I+++ L+E W+NDN + + + +L+ K ++T+Y++RNP+
Sbjct: 234 LHTLDLAGNEISNLEEISNIMSLEELWLNDNCIDSLDQIELLKKLKNMKTLYIERNPLQL 293
Query: 297 D--PNYRRKIKLVCPWIVQIDA 316
+ P YR KI + PWI Q+DA
Sbjct: 294 NLGPAYRMKILEILPWISQLDA 315
>gi|402587017|gb|EJW80953.1| leucine Rich Repeat family protein [Wuchereria bancrofti]
Length = 308
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 119/299 (39%), Positives = 174/299 (58%), Gaps = 30/299 (10%)
Query: 29 HGNQMSLDNPDEESEA---ETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKE 85
H N L+ D +SE A + S+ ++ L +R NL+ + + +TTL +
Sbjct: 31 HRNLFDLNEFDVDSEIIDLNQCRVDAIPDLSRFFQLKELCMRQNLLVSLSDHLAITTLTQ 90
Query: 86 LELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKIS---KIEN 142
L+LYDNQ+ VI NLD LINL ILDLS+NRIR+I+GL L NL ++YL NKI K+EN
Sbjct: 91 LDLYDNQIEVISNLDALINLVILDLSYNRIRKIEGLSALCNLRRIYLVHNKIEKLMKLEN 150
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+ HL+ L+ L +G KNKI + +NL +L KL +LS NR
Sbjct: 151 IGHLQCLRELYIG----------------------KNKIQKFENLENLVKLTVLSAPANR 188
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
L + + L+ LT+L++S+ G+ ++ L +KL +D A NKI+ + + HL L++
Sbjct: 189 LTELSGISMLSELTELHISDQGIESLSELTFQKKLAIIDAANNKIAKLDGLIHLDHLEDI 248
Query: 263 WINDNQVSDWNTVNVLENNKQLQTIYLDRNPV--AQDPNYRRKIKLVCPWIVQIDATLA 319
W+NDN++SDWN + L L+TIYL+RNP+ A +YRRK+ L P + QIDATL
Sbjct: 249 WLNDNEISDWNELIKLSKLPALKTIYLERNPIYKADRGSYRRKVMLCLPQVTQIDATLC 307
>gi|66810069|ref|XP_638758.1| hypothetical protein DDB_G0284039 [Dictyostelium discoideum AX4]
gi|74996903|sp|Q54Q39.1|PP1R7_DICDI RecName: Full=Protein phosphatase 1 regulatory subunit pprA
gi|60467329|gb|EAL65360.1| hypothetical protein DDB_G0284039 [Dictyostelium discoideum AX4]
Length = 336
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/263 (44%), Positives = 168/263 (63%), Gaps = 5/263 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+++L R NLI+KIENI L L+ L+LYDN+L VIEN+ +L LDLSFN IR ++
Sbjct: 72 LKKLCFRQNLIEKIENIDQLKELESLDLYDNKLQVIENIKDFQSLTYLDLSFNEIRIVEN 131
Query: 121 LD--HLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L + +++LYL +NKI+KIEN+ L +K LELG N++R IENL+ L N+E L+LG+
Sbjct: 132 LSIKDIPKIKELYLANNKITKIENLQELVPIKNLELGSNRLREIENLENLVNIETLWLGR 191
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTI--ENLEALTNLTQLYLSENGLTTIENLLSNEK 236
NKI+ I + L+ L ILSLQ NRL I + L L L +LYLS NG+T I+ L S ++
Sbjct: 192 NKITEIKGINHLSHLRILSLQSNRLTEIGVKGLVGLNCLEELYLSHNGITDIDGLQSLKQ 251
Query: 237 LETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ 296
L TLD++ NKI + + L +L E W NDN V + + + K ++ +Y +RNPVA
Sbjct: 252 LRTLDISANKIKTLVGLNELPDLDEIWCNDNLVDSMDNIEQ-QVTKSIKCLYFERNPVAT 310
Query: 297 DPNYRRKIKLVCPWIVQIDATLA 319
YRR + P + Q+DAT+
Sbjct: 311 HVQYRRMFINMFPQLKQLDATMV 333
>gi|290994585|ref|XP_002679912.1| hypothetical protein NAEGRDRAFT_78842 [Naegleria gruberi]
gi|284093531|gb|EFC47168.1| hypothetical protein NAEGRDRAFT_78842 [Naegleria gruberi]
Length = 378
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/266 (45%), Positives = 173/266 (65%), Gaps = 9/266 (3%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIE--NLDTLINLEILDLSFNRIR 116
V ++ LLLR NLI+K+E + L +L L+LY NQ+ ++ L+ L NLEILDLSFN++R
Sbjct: 108 VNLQSLLLRQNLIEKVEGLKGLKSLVHLDLYGNQIKRVDVNELNHLQNLEILDLSFNKLR 167
Query: 117 E-IKGLDHLANLEKLYLCSNKISKIE-----NVDHLKKLKVLELGDNKIRIIENLDGLTN 170
+KGL + +L +LY +NKI +IE L L++LELG N++R I+NL+ LT
Sbjct: 168 HMVKGLK-MPHLRELYYVNNKIKEIEEEATKGETDLPALELLELGANRLREIKNLENLTT 226
Query: 171 LEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIEN 230
L++L+LGKNKI+ I L +L +L LSLQ NR++ +EN+ LT LT+LY+SENG+ TIE
Sbjct: 227 LKQLWLGKNKITEIKGLNTLKQLIRLSLQSNRIKKLENINHLTQLTELYISENGIETIEG 286
Query: 231 LLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLD 290
L + +L LD+A N I I + +L +L+E WINDNQ+ + V L N QL ++Y
Sbjct: 287 LDTLTELVLLDLAQNFIKQISGLDNLIQLEELWINDNQLETFKEVEKLVNLPQLTSVYFR 346
Query: 291 RNPVAQDPNYRRKIKLVCPWIVQIDA 316
N DP Y+RKI L+ P + ID
Sbjct: 347 SNLFFNDPQYKRKIILILPNVTSIDG 372
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 93/157 (59%), Gaps = 3/157 (1%)
Query: 48 ESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEI 107
E +A E+ +E L L N +++I+N+ LTTLK+L L N++T I+ L+TL L
Sbjct: 192 EEEATKGETDLPALELLELGANRLREIKNLENLTTLKQLWLGKNKITEIKGLNTLKQLIR 251
Query: 108 LDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG 167
L L NRI++++ ++HL L +LY+ N I IE +D L +L +L+L N I+ I LD
Sbjct: 252 LSLQSNRIKKLENINHLTQLTELYISENGIETIEGLDTLTELVLLDLAQNFIKQISGLDN 311
Query: 168 LTNLEELYLGKNKI---SRIDNLASLTKLNILSLQCN 201
L LEEL++ N++ ++ L +L +L + + N
Sbjct: 312 LIQLEELWINDNQLETFKEVEKLVNLPQLTSVYFRSN 348
>gi|344234282|gb|EGV66152.1| L domain-like protein [Candida tenuis ATCC 10573]
gi|344234283|gb|EGV66153.1| hypothetical protein CANTEDRAFT_112589 [Candida tenuis ATCC 10573]
Length = 375
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 120/264 (45%), Positives = 177/264 (67%), Gaps = 7/264 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIE-NLDTLINLEILDLSFNRIREI 118
+E + R NLI + ++ L+ T++EL+ YDN++ I N+ L+NL+ LDLSFN+I+ I
Sbjct: 108 LESVCFRQNLITSMVDVRDLSDTVEELDFYDNRINHISSNIGKLVNLKNLDLSFNKIKNI 167
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIR-IIENLDGLTNLEELYLG 177
K L+ L LE LY NKI +I+N+D+ K+K LELG NKI I E + L N+E+L+LG
Sbjct: 168 KNLEKLTELENLYFVQNKIKEIKNLDNNLKIKNLELGGNKIGDISEMMLKLVNIEQLWLG 227
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I R+ NL +L L ILS+Q NR+ IE LE+L NL +LYLS N ++ IENL N KL
Sbjct: 228 KNQIPRLQNLQNLKNLRILSIQSNRIEKIEGLESLENLQELYLSHNKISKIENLEHNTKL 287
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-A 295
+ LDV N + + ++HL +L +FW + NQ+S++N +N L + +L T+Y + NPV
Sbjct: 288 QVLDVTSNGLKSLSGLSHLKQLTDFWCSYNQISNFNEINRELGSLPELDTVYFEGNPVQT 347
Query: 296 QDPN-YRRKIKL-VCPWIVQIDAT 317
+P YRRK++L + P + +IDAT
Sbjct: 348 SNPTAYRRKLRLSLGPSLSKIDAT 371
>gi|119591651|gb|EAW71245.1| protein phosphatase 1, regulatory subunit 7, isoform CRA_c [Homo
sapiens]
Length = 171
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 126/169 (74%)
Query: 151 VLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLE 210
+LELG N+IR IEN+D LTNLE L+LGKNKI+++ NL +LT L +LS+Q NRL IE L+
Sbjct: 1 MLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQ 60
Query: 211 ALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
L NL +LYLS NG+ IE L +N KL LD+A N+I I+NI+HLTELQEFW+NDN +
Sbjct: 61 NLVNLRELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLE 120
Query: 271 DWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDATLA 319
W+ ++ L+ + L+T+YL+RNP+ +DP YRRK+ L P + QIDAT
Sbjct: 121 SWSDLDELKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQIDATFV 169
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 85/139 (61%), Gaps = 3/139 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I+ IENI LT L+ L L N++T ++NLD L NL +L + NR+ +I+GL +L NL
Sbjct: 7 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLR 66
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI---SRID 185
+LYL N I IE +++ KL +L++ N+I+ IEN+ LT L+E ++ N + S +D
Sbjct: 67 ELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNLLESWSDLD 126
Query: 186 NLASLTKLNILSLQCNRLR 204
L L + L+ N L+
Sbjct: 127 ELKGARSLETVYLERNPLQ 145
>gi|145486130|ref|XP_001429072.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124396162|emb|CAK61674.1| unnamed protein product [Paramecium tetraurelia]
Length = 339
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 199/299 (66%), Gaps = 5/299 (1%)
Query: 23 EAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCI--ERLLLRWNLIKKIENIHML 80
+ ++ + Q + E+ + E + + ++ + C+ +RL LR NLI K+E +
Sbjct: 39 QKIQYKYLGQPPFEINQEDEDISCIEGRIPNIQALDKCVNLKRLCLRTNLISKLEGLQNC 98
Query: 81 TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKI 140
L+EL+LYDN+L IEN++ L+NLEILDLSFN I++I+ L++ L+KL+L SNKI KI
Sbjct: 99 VLLEELDLYDNRLIKIENIELLVNLEILDLSFNNIKKIENLENQKKLKKLFLLSNKIKKI 158
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLT-KLNILSLQ 199
+N+D +L +LELG NKI IENLD L NL EL+LGKNKI I NL L L +LSL
Sbjct: 159 QNLD-FPELTMLELGSNKIAEIENLDRLPNLRELFLGKNKIQIIKNLEPLANTLELLSLS 217
Query: 200 CNRLRTIE-NLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
CN+++ I+ ++ L NL L ++EN + TIENL ++LE LD+A+NKI+ +Q I L +
Sbjct: 218 CNKIQIIQPEIQCLQNLNYLQIAENFIATIENLNPLKQLELLDLAHNKITKVQGIDQLQQ 277
Query: 259 LQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDAT 317
LQ+ W+N+N++ + L+ N ++TIY+++NPVAQ P+Y+ ++ + P ++QIDA
Sbjct: 278 LQDLWLNNNKIEYFKDFEQLKLNPNIKTIYVEQNPVAQFPDYKMQLLSLIPTLIQIDAV 336
>gi|365759785|gb|EHN01556.1| Sds22p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 338
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 175/267 (65%), Gaps = 10/267 (3%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLK--ELELYDNQLTVIE-NLDTLINLEILDLSFNRIRE 117
+++L LR NLI+ I + +L K +L+ YDN++ I N++ L L LDLSFN+I+
Sbjct: 68 LKQLCLRQNLIESISEVEVLPHDKIIDLDFYDNKIKHISSNINKLTKLTSLDLSFNKIKH 127
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE--NLDGLTNLEELY 175
IK L++L LE L+ N ISKIEN+ LK LK LELG NKI IE + +GL+NLEE++
Sbjct: 128 IKNLENLTELENLFFVQNSISKIENLSTLKSLKNLELGGNKIHTIEPDSFEGLSNLEEIW 187
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LGKN I R+ NL L L ILS+Q N+L+ IENLEALTNL +LYLS N + IE L N
Sbjct: 188 LGKNSIPRLINLHPLQNLKILSIQSNKLKKIENLEALTNLEELYLSHNFIAKIEGLEKNL 247
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQV--SDWNTVNVLENNKQLQTIYLDRNP 293
KL TLD+ NKI+ ++N+ HL L + W + N++ S + L N +L+TIYL+ NP
Sbjct: 248 KLTTLDITSNKITCLENLNHLPNLTDIWASFNKIDQSFESLGENLSNLSRLETIYLEGNP 307
Query: 294 VAQD--PNYRRKIKL-VCPWIVQIDAT 317
+ + +YRRK+ + + P + +IDAT
Sbjct: 308 IQLENKTSYRRKLTMNLPPSLQKIDAT 334
>gi|401839394|gb|EJT42644.1| SDS22-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 338
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 175/267 (65%), Gaps = 10/267 (3%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLK--ELELYDNQLTVIE-NLDTLINLEILDLSFNRIRE 117
+++L LR NLI+ I + +L K +L+ YDN++ I N++ L L LDLSFN+I+
Sbjct: 68 LKQLCLRQNLIESISEVEVLPHDKIVDLDFYDNKIKHISSNVNKLTKLTSLDLSFNKIKH 127
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE--NLDGLTNLEELY 175
IK L++L LE L+ N ISKIEN+ LK LK LELG NKI IE + +GL+NLEE++
Sbjct: 128 IKNLENLTELENLFFVQNSISKIENLSTLKSLKNLELGGNKIHTIEPDSFEGLSNLEEIW 187
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LGKN I R+ NL L L ILS+Q N+L+ IENLEALTNL +LYLS N + IE L N
Sbjct: 188 LGKNSIPRLINLHPLQNLKILSIQSNKLKRIENLEALTNLEELYLSHNFIAKIEGLEKNL 247
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQV--SDWNTVNVLENNKQLQTIYLDRNP 293
KL TLD+ NKI+ ++N+ HL L + W + N++ S + L N +L+TIYL+ NP
Sbjct: 248 KLTTLDITSNKITCLENLNHLPNLTDIWASFNKIDQSFESLGENLSNLSRLETIYLEGNP 307
Query: 294 VAQD--PNYRRKIKL-VCPWIVQIDAT 317
+ + +YRRK+ + + P + +IDAT
Sbjct: 308 IQLENKTSYRRKLTMNLPPSLQKIDAT 334
>gi|342878843|gb|EGU80132.1| hypothetical protein FOXB_09407 [Fusarium oxysporum Fo5176]
Length = 378
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/262 (43%), Positives = 170/262 (64%), Gaps = 4/262 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ R+ LR N I++I+ + L TL++L+LYDN ++ I LD L NL LDLSFN+I+ IK
Sbjct: 114 VARICLRQNSIEQIDGLSALAETLEDLDLYDNLISHIRGLDELTNLTSLDLSFNKIKHIK 173
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
++HL L++LYL +NKI KIE ++ L KL LELG N+IR I+NLD L +EEL+L KN
Sbjct: 174 HINHLTKLKELYLVANKIGKIEGLEGLDKLTSLELGSNRIREIKNLDSLKAIEELWLAKN 233
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + L L L +LS+Q NR+ + L+ + L +LY+S N L ++E L N KL
Sbjct: 234 KITELTGLGGLPNLRLLSIQSNRISDLSPLKDVPTLEELYISHNMLESLEGLEHNPKLHV 293
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVA-QD 297
LD++ N I+ I+ + L EL+E W + N + D+ V L + K+L T+Y + NP+ Q+
Sbjct: 294 LDISNNNITSIKGLESLAELEELWASYNLIGDYKEVAKYLADKKELTTVYFEGNPLQLQE 353
Query: 298 P-NYRRKIKLVCPWIVQIDATL 318
P YR +I++ P + QIDAT
Sbjct: 354 PVAYRNRIRMTLPQVKQIDATF 375
>gi|134110802|ref|XP_775865.1| hypothetical protein CNBD2740 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258531|gb|EAL21218.1| hypothetical protein CNBD2740 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 372
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/269 (46%), Positives = 169/269 (62%), Gaps = 14/269 (5%)
Query: 61 IERLLLRWN-LIKKIENIHM--LTTLKELELYDNQLTVI---ENLDTLINLEILDLSFNR 114
++RL LR N L + + LT L+EL+ YDN+L E L N+ LDLSFN
Sbjct: 102 LKRLCLRQNELTSPLPSGAFANLTELEELDFYDNRLGPHVRDEELAGCPNISTLDLSFNN 161
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIEN--VDHLK-KLKVLELGDNKIRIIENLDGLTNL 171
IR L L ++ LYL NKIS++E +D + +K LELG N+IR+IENLD L +L
Sbjct: 162 IRHAPSLPSLQHVNTLYLVQNKISRLEKGELDWCQDTMKSLELGGNRIRVIENLDKLIHL 221
Query: 172 EELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
+EL+LGKNKI ++NL++ + L ILSLQ NR+ +ENLE L NL +LYLS NGL IE L
Sbjct: 222 QELWLGKNKIRVLENLSTFSSLRILSLQSNRITKLENLEGLVNLEELYLSHNGLQKIEGL 281
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLD 290
N L TLDV N I I+N++HL+ L+EFW ++NQ+ + + + L L TIYL+
Sbjct: 282 HHN--LTTLDVGNNFIKEIENLSHLSNLEEFWASNNQIGSLHALESELRPLTNLCTIYLE 339
Query: 291 RNPVAQD--PNYRRKIKLVCPWIVQIDAT 317
NP ++ NYRRKI L P + QIDAT
Sbjct: 340 GNPCQKEDMGNYRRKIMLALPQVKQIDAT 368
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 78/133 (58%), Gaps = 6/133 (4%)
Query: 57 KEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIR 116
K + ++ L L N I+ +EN+ ++L+ L L N++T +ENL+ L+NLE L LS N ++
Sbjct: 217 KLIHLQELWLGKNKIRVLENLSTFSSLRILSLQSNRITKLENLEGLVNLEELYLSHNGLQ 276
Query: 117 EIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG----LTNLE 172
+I+GL H NL L + +N I +IEN+ HL L+ +N+I + L+ LTNL
Sbjct: 277 KIEGLHH--NLTTLDVGNNFIKEIENLSHLSNLEEFWASNNQIGSLHALESELRPLTNLC 334
Query: 173 ELYLGKNKISRID 185
+YL N + D
Sbjct: 335 TIYLEGNPCQKED 347
>gi|328849807|gb|EGF98981.1| hypothetical protein MELLADRAFT_73480 [Melampsora larici-populina
98AG31]
Length = 372
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/249 (50%), Positives = 167/249 (67%), Gaps = 9/249 (3%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
LT L+EL+LYDNQL+ IE L L L+ LDLSFN +R+I L+ L +L+ LYL NKIS
Sbjct: 123 LTALEELDLYDNQLSKIEGLTGLSALQSLDLSFNLLRKITNLESLTSLKILYLIQNKIST 182
Query: 140 IENVDHLKK-LKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSL 198
IE ++HL L +ELG N+IR I NL LTNL EL+LGKNKI++++ L++L L LS+
Sbjct: 183 IEGLEHLSSTLTSVELGSNRIRRISNLAALTNLTELWLGKNKITKLEGLSTLVNLKTLSI 242
Query: 199 QCNRLRTIENLEALTNLTQLYLSENGLTTI-ENLLSNEKLETLDVAYNKISIIQNIAHLT 257
Q NR+ +E LE L+NL +LY+S NGLT I + L N L LD+A N+I + I LT
Sbjct: 243 QSNRIVQLEGLEELSNLEELYISHNGLTKIGDGLAKNINLRVLDIAANRIDDLHGIECLT 302
Query: 258 ELQEFWINDNQVS--DWNTVNVLENNK---QLQTIYLDRNPVAQD--PNYRRKIKLVCPW 310
+L+E W N+NQ++ +NT++ + L T+YL+ NP+ D NYRRKIKL CP
Sbjct: 303 KLEELWANNNQLTVLAFNTISPSLSESCMPNLTTVYLEGNPLQADMGANYRRKIKLACPQ 362
Query: 311 IVQIDATLA 319
I QIDAT A
Sbjct: 363 ISQIDATFA 371
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 92/160 (57%), Gaps = 19/160 (11%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I++I N+ LT L EL L N++T +E L TL+NL+ L + NRI +++GL+ L+NLE
Sbjct: 201 NRIRRISNLAALTNLTELWLGKNKITKLEGLSTLVNLKTLSIQSNRIVQLEGLEELSNLE 260
Query: 129 KLYLCSNKISKIENVDHLKK---LKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+LY+ N ++KI D L K L+VL++ N+I + ++ LT LEEL+ N+++
Sbjct: 261 ELYISHNGLTKIG--DGLAKNINLRVLDIAANRIDDLHGIECLTKLEELWANNNQLTV-- 316
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGL 225
LA T LS C + NLT +YL N L
Sbjct: 317 -LAFNTISPSLSESC-----------MPNLTTVYLEGNPL 344
>gi|408395672|gb|EKJ74849.1| hypothetical protein FPSE_05023 [Fusarium pseudograminearum CS3096]
Length = 378
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/262 (43%), Positives = 172/262 (65%), Gaps = 4/262 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ R+ LR N I++I+ + L TL++L+LYDN ++ L+ L NL LDLSFN+I+ +K
Sbjct: 114 VSRICLRQNSIEQIDGLSALAETLEDLDLYDNLISHTRGLEDLTNLTSLDLSFNKIKHVK 173
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
++HL L++LYL +NKISKIE ++ L KL LELG N+IR I+NLD L +EEL+L KN
Sbjct: 174 HINHLTKLKELYLVANKISKIEGLEGLDKLTSLELGSNRIREIKNLDSLKAIEELWLAKN 233
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + L + L +LS+Q NR+ + L+ + L +LY+S N L ++E L N KL
Sbjct: 234 KITELTGLGGMPNLRLLSIQSNRISDLSPLKDVPTLEELYISHNMLESLEGLEHNPKLHV 293
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVA-QD 297
LD++ NKI+ I+ + L+EL+E W + N +SD+ V L + K L T+Y + NP+ Q+
Sbjct: 294 LDISNNKITSIKGLELLSELEELWASYNLISDYKEVAKYLSDKKCLTTVYFEGNPLQLQE 353
Query: 298 P-NYRRKIKLVCPWIVQIDATL 318
P YR +I+L P + QIDAT
Sbjct: 354 PVAYRNRIRLTLPQVKQIDATF 375
>gi|168027872|ref|XP_001766453.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682362|gb|EDQ68781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 319
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/265 (41%), Positives = 173/265 (65%), Gaps = 4/265 (1%)
Query: 57 KEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIR 116
+++ E+ LL + + + L+ LKEL L DN+L I L L+NL +LD+S+N++
Sbjct: 53 QKLSFEQNLLADDAVSVLSPCTALSDLKELVLRDNKLLKIPELSNLVNLTLLDVSYNKVS 112
Query: 117 EIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
+ G+ +++ L +LYL N+I KIE ++HL +L+VLELG N+IR++E LD L L++L+
Sbjct: 113 SMNGMSAISSSLTELYLSKNEIGKIEEIEHLTRLRVLELGSNRIRVMEGLDQLKELQQLW 172
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LG+N+I + NL LT L +S+Q NRL ++ + NLT+LYLS N ++ +E L + +
Sbjct: 173 LGRNRIQSV-NLCGLTGLLKISVQSNRLSSMAVFQECVNLTELYLSHNQISVMEGLSTLQ 231
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNK-QLQTIYLDRNP 293
L LD+A NKI+ I N+ LT L++ W+NDN V+ + + + LE K L TIYL+RNP
Sbjct: 232 NLRVLDLASNKITDISNLEKLTRLEDLWLNDNSVATLDDIEMKLEGCKNSLTTIYLERNP 291
Query: 294 VAQDPNYRRKIKLVCPWIVQIDATL 318
A DPNY R ++ + P + Q+D+ L
Sbjct: 292 CAHDPNYIRTMRAILPKLQQLDSHL 316
>gi|254568814|ref|XP_002491517.1| Conserved nuclear regulatory subunit of Glc7p type 1 protein
serine-threonine phosphatase (PP1) [Komagataella
pastoris GS115]
gi|238031314|emb|CAY69237.1| Conserved nuclear regulatory subunit of Glc7p type 1 protein
serine-threonine phosphatase (PP1) [Komagataella
pastoris GS115]
gi|328351972|emb|CCA38371.1| hypothetical protein PP7435_Chr2-0685 [Komagataella pastoris CBS
7435]
Length = 360
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/261 (45%), Positives = 175/261 (67%), Gaps = 9/261 (3%)
Query: 66 LRWNLIKKIENIHMLTT---LKELELYDNQLTVI-ENLDTLINLEILDLSFNRIREIKGL 121
LR NL+ + + ++ + EL+ YDN++ I ++++ NLE+LDLSFN+I+ IK +
Sbjct: 96 LRQNLVDSLVPLKAISKKDQVTELDFYDNRINHISKHVNEFENLEVLDLSFNKIKNIKNV 155
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKI-RIIENLDGLTNLEELYLGKNK 180
D L+ L+KLYL NK+ +I+N+ +LK L+ LELG NK+ I E L L+++ +L+LGKN
Sbjct: 156 DRLSKLKKLYLVQNKVHEIKNISNLKSLETLELGGNKLTEIGEELLNLSSITDLWLGKNY 215
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I R+ NL SL L ILS+Q NRL IE LE L NL +LYL++NG++ IENL N KLE L
Sbjct: 216 IQRLQNLDSLKNLEILSIQSNRLTKIEGLEELVNLRELYLADNGISKIENLDKNTKLEVL 275
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQDP 298
D+ NKI ++N++HLT L + W + N++S + V L QL T+Y + NP+ ++P
Sbjct: 276 DLTSNKIEHLENMSHLTSLTDLWFSYNKISSFAEVEKELSKLPQLDTVYFEHNPIQTENP 335
Query: 299 -NYRRKIKLVCPWIVQ-IDAT 317
+YRRK+KL+ +Q IDAT
Sbjct: 336 TSYRRKLKLILGSSLQKIDAT 356
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 4/126 (3%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I L L N I++++N+ L L+ L + N+LT IE L+ L+NL L L+ N I +I+
Sbjct: 205 SITDLWLGKNYIQRLQNLDSLKNLEILSIQSNRLTKIEGLEELVNLRELYLADNGISKIE 264
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKI----RIIENLDGLTNLEELY 175
LD LE L L SNKI +EN+ HL L L NKI + + L L L+ +Y
Sbjct: 265 NLDKNTKLEVLDLTSNKIEHLENMSHLTSLTDLWFSYNKISSFAEVEKELSKLPQLDTVY 324
Query: 176 LGKNKI 181
N I
Sbjct: 325 FEHNPI 330
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V + L L N I KIEN+ T L+ L+L N++ +EN+ L +L L S+N+I
Sbjct: 248 VNLRELYLADNGISKIENLDKNTKLEVLDLTSNKIEHLENMSHLTSLTDLWFSYNKISSF 307
Query: 119 ----KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVL 152
K L L L+ +Y N I + +KLK++
Sbjct: 308 AEVEKELSKLPQLDTVYFEHNPIQTENPTSYRRKLKLI 345
>gi|405120134|gb|AFR94905.1| enzyme regulator [Cryptococcus neoformans var. grubii H99]
Length = 368
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/272 (47%), Positives = 170/272 (62%), Gaps = 20/272 (7%)
Query: 61 IERLLLRWNLIKKI---ENIHMLTTLKELELYDNQLTVI---ENLDTLINLEILDLSFNR 114
++RL LR N + E L L+EL+ YDN+L E L N+ LDLSFN
Sbjct: 102 LKRLCLRQNELTSPLPSEAFTNLAELEELDFYDNRLGPHVRDEELAGCPNISTLDLSFNN 161
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIEN--VDHLK-KLKVLELGDNKIRIIENLDGLTNL 171
IR L L ++ LYL NKIS++E +D + +K LELG N+IR+IENLD L +L
Sbjct: 162 IRHSPSLPSLRHVNTLYLVQNKISRLEKGELDWCQDTMKSLELGGNRIRVIENLDKLIHL 221
Query: 172 EELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
EEL+LGKNKI ++NL++ + L ILSLQ NR+ +ENLE L NL +LYLS NGL IE L
Sbjct: 222 EELWLGKNKIRVLENLSTFSSLRILSLQSNRITKLENLEGLVNLEELYLSHNGLQKIEGL 281
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ----LQTI 287
N L TLDV N I I N++HL+ L+EFW ++NQ+ ++++ LE+ + L TI
Sbjct: 282 HHN--LTTLDVGNNFIKEIGNLSHLSNLEEFWASNNQI---DSLHALESELRPLTNLCTI 336
Query: 288 YLDRNPVAQD--PNYRRKIKLVCPWIVQIDAT 317
YL+ NP ++ NYRRKI L P I QIDAT
Sbjct: 337 YLEGNPCQKEDMGNYRRKIMLALPQIKQIDAT 368
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 77/133 (57%), Gaps = 6/133 (4%)
Query: 57 KEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIR 116
K + +E L L N I+ +EN+ ++L+ L L N++T +ENL+ L+NLE L LS N ++
Sbjct: 217 KLIHLEELWLGKNKIRVLENLSTFSSLRILSLQSNRITKLENLEGLVNLEELYLSHNGLQ 276
Query: 117 EIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG----LTNLE 172
+I+GL H NL L + +N I +I N+ HL L+ +N+I + L+ LTNL
Sbjct: 277 KIEGLHH--NLTTLDVGNNFIKEIGNLSHLSNLEEFWASNNQIDSLHALESELRPLTNLC 334
Query: 173 ELYLGKNKISRID 185
+YL N + D
Sbjct: 335 TIYLEGNPCQKED 347
>gi|449302882|gb|EMC98890.1| hypothetical protein BAUCODRAFT_384025 [Baudoinia compniacensis
UAMH 10762]
Length = 369
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/261 (40%), Positives = 171/261 (65%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ RL LR N I+ I+ + +TL+ELELYDN + I+ L+T L+ LDLS+N+++ IK
Sbjct: 106 LRRLCLRQNSIQHIKLPDELASTLQELELYDNLIKHIDGLETFTELKSLDLSYNKLKHIK 165
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ L +L+ LY N++++IEN+ L +L LELG N+IR IE LD L LE L+LG+N
Sbjct: 166 NISTLRHLDHLYFVQNRLTQIENLVDLTELVYLELGANRIREIEGLDTLKKLEHLWLGQN 225
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
+I+ + NL+SLT L LS+Q NRL ++ L+ L LT+LY+S+N ++++E L N KLE
Sbjct: 226 RIAELKNLSSLTSLRTLSIQANRLTSLSGLQDLPQLTELYVSDNQISSLEPLQHNPKLEI 285
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVAQDP 298
LD N I+ + I L +L+ W ++ Q++D+ + VL + ++L+ +Y + NPV +
Sbjct: 286 LDFQTNPITSLAGIEGLRDLENLWASNCQIADFREIERVLRDKEKLEEVYFEGNPVQRQN 345
Query: 299 N--YRRKIKLVCPWIVQIDAT 317
YR K++L P +++IDA+
Sbjct: 346 AVLYRNKVRLALPQVLKIDAS 366
>gi|46109280|ref|XP_381698.1| hypothetical protein FG01522.1 [Gibberella zeae PH-1]
Length = 378
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/262 (43%), Positives = 172/262 (65%), Gaps = 4/262 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ R+ LR N I++I+ + L TL++L+LYDN ++ L+ L N+ LDLSFN+I+ +K
Sbjct: 114 VSRICLRQNSIEQIDGLSALAETLEDLDLYDNLISHTRGLEDLTNITSLDLSFNKIKHVK 173
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
++HL L++LYL +NKISKIE ++ L KL LELG N+IR I+NLD L +EEL+L KN
Sbjct: 174 HINHLTKLKELYLVANKISKIEGLEGLDKLTSLELGSNRIREIKNLDSLKAIEELWLAKN 233
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + L + L +LS+Q NR+ + L+ + L +LY+S N L ++E L N +L
Sbjct: 234 KITELTGLGGMPNLRLLSIQSNRISDLSPLKDVPTLEELYISHNMLESLEGLEHNPRLHV 293
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVA-QD 297
LD++ NKI+ I+ + L+EL+E W + N +SD+ V L + K L T+Y + NP+ Q+
Sbjct: 294 LDISNNKITSIKGLELLSELEELWASYNLISDYKEVAKYLSDKKCLTTVYFEGNPLQLQE 353
Query: 298 P-NYRRKIKLVCPWIVQIDATL 318
P YR +I+L P + QIDAT
Sbjct: 354 PVAYRNRIRLTLPQVKQIDATF 375
>gi|324518304|gb|ADY47066.1| Unknown [Ascaris suum]
Length = 289
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 158/223 (70%), Gaps = 3/223 (1%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
S+ ++ L+LR NL+ + + TL EL+LYDNQ+ I NL+TL+NLE+LD+S+NRI
Sbjct: 64 SRFKSLQELVLRTNLLVTLNENLSVVTLTELDLYDNQIEAISNLETLVNLEVLDMSYNRI 123
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
R+++GL +L NL+K++ NKI IE ++ +K L++LELGDN+I+ IEN+ LTNL E Y
Sbjct: 124 RKLEGLSNLRNLKKVFFVHNKIGAIEGLEAMKDLELLELGDNRIKKIENIAHLTNLREFY 183
Query: 176 LGKNKISRIDNLASLTKLNIL---SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLL 232
+GKNKI ++++L +L KL +L S + NRL +++ +EAL L +L++S+ GL ++ L
Sbjct: 184 IGKNKIQKLESLETLQKLRVLSIPSFEANRLTSLDGIEALPMLRELHISDQGLESLAQLS 243
Query: 233 SNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV 275
+ +L +D + N IS + ++H+ L++ W+NDN+++DWN V
Sbjct: 244 ALNELTIIDASSNSISKLDGLSHMNNLEDLWLNDNEIADWNEV 286
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 84/149 (56%), Gaps = 2/149 (1%)
Query: 132 LCSNKISKIENVDHLKKLKVLELGDNKIRII-ENLDGLTNLEELYLGKNKISRIDNLASL 190
L ++ I ++ K L+ L L N + + ENL +T L EL L N+I I NL +L
Sbjct: 52 LTQCRVDAIPDLSRFKSLQELVLRTNLLVTLNENLSVVT-LTELDLYDNQIEAISNLETL 110
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
L +L + NR+R +E L L NL +++ N + IE L + + LE L++ N+I I
Sbjct: 111 VNLEVLDMSYNRIRKLEGLSNLRNLKKVFFVHNKIGAIEGLEAMKDLELLELGDNRIKKI 170
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLE 279
+NIAHLT L+EF+I N++ ++ L+
Sbjct: 171 ENIAHLTNLREFYIGKNKIQKLESLETLQ 199
>gi|393220973|gb|EJD06458.1| L domain-like protein [Fomitiporia mediterranea MF3/22]
Length = 373
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 116/266 (43%), Positives = 166/266 (62%), Gaps = 8/266 (3%)
Query: 60 CIERLLLRWNLIKKI--ENIHMLTTLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIR 116
++RL LR N + + E L L+E++ YDN+L I + LD L I+DLSFN +R
Sbjct: 103 SLKRLCLRQNHLTSLDPEIFQALVELEEIDFYDNRLKGIGDALDACSKLSIIDLSFNLLR 162
Query: 117 EIKG-LDHLANLEKLYLCSNKISKIENVDHLKK-LKVLELGDNKIRIIENLDGLTNLEEL 174
I LD +L +Y N+IS+I+ + L L LELG NKIR IENL+ L NLEEL
Sbjct: 163 SIPDRLDRFPSLRTIYFVQNRISRIDGLSSLGATLVSLELGGNKIRKIENLEALINLEEL 222
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LGKNKI+R++ L++L +L ILS+Q NR+ IE LE L++L + Y+S NG+ IE L +N
Sbjct: 223 WLGKNKIARLEGLSTLQRLKILSIQSNRIEKIEGLELLSSLEEFYISHNGIKRIEGLENN 282
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD-WNTVNVLENNKQLQTIYLDRNP 293
+KL LDV N I ++ + L +L+E W ++N+++ + L + L+T+YL+ NP
Sbjct: 283 KKLRVLDVGNNYIEKLEGLEGLDDLEELWASNNRITTLLDLEPQLGKKESLETVYLEGNP 342
Query: 294 VAQDPN--YRRKIKLVCPWIVQIDAT 317
V Q YRRKI L P + QIDAT
Sbjct: 343 VQQPEGTAYRRKISLALPQLKQIDAT 368
>gi|322711896|gb|EFZ03469.1| protein phosphatases PP1 regulatory subunit sds22 [Metarhizium
anisopliae ARSEF 23]
Length = 377
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/262 (43%), Positives = 173/262 (66%), Gaps = 4/262 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ R+ LR N I++IE + L TLK+L+LYDN ++ + +D L NL LDLSFN+I+ IK
Sbjct: 113 VARICLRQNTIQEIEGLAPLAATLKDLDLYDNLISHMRGMDELKNLVCLDLSFNKIKHIK 172
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ H+ L++L+L +NKISKIE +D L+KL LELG N+IR + NLD L NLEEL++ KN
Sbjct: 173 NISHMTELKELFLVANKISKIEGLDTLQKLTSLELGSNRIREMRNLDNLRNLEELWVAKN 232
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + L L+ L +LS+Q NR+R + L+ ++ L +LY++ N L ++E + N L
Sbjct: 233 KITDLTGLGGLSSLRLLSIQSNRIRDLSPLKEVSQLEELYIAHNALESLEGIEGNTNLTI 292
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVA-QD 297
LD++ N+I ++ + LT L+E W + NQ+ D V VL++ + L T+Y + NP+ +
Sbjct: 293 LDISNNQIRSLKGLEGLTRLEEVWASYNQIGDLVEVEKVLKDKENLTTVYFEGNPLQLRG 352
Query: 298 PN-YRRKIKLVCPWIVQIDATL 318
P YR K++L P + QIDAT
Sbjct: 353 PALYRNKVRLALPQVSQIDATF 374
>gi|242802809|ref|XP_002484048.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Talaromyces stipitatus ATCC 10500]
gi|218717393|gb|EED16814.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Talaromyces stipitatus ATCC 10500]
Length = 348
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 118/261 (45%), Positives = 175/261 (67%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ RL LR N I +IE ++ TLKEL+LYDN ++ ++ LD L NL +LDLSFN+I+ IK
Sbjct: 83 LARLCLRQNQISRIELPSNLGQTLKELDLYDNLISHVKGLDDLTNLTLLDLSFNKIKHIK 142
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL L ++ N+IS IE +D L L+ LELG N+IR I+ LD L LE+L+LGKN
Sbjct: 143 NVSHLTELTDIFFVQNRISTIEGLDELVHLRNLELGANRIREIQGLDNLRALEQLWLGKN 202
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + NL+SL+ L ILS+Q NRL +I L L +L +LY+S N LT + L SN L
Sbjct: 203 KITEMKNLSSLSNLKILSIQSNRLTSITGLSDLHSLEELYISHNALTDLSGLESNTNLRV 262
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQD 297
LD + N++S ++ I+HLT+++E W ++N +S + V L + ++L+T+Y + NP+ ++
Sbjct: 263 LDFSNNQVSKLEGISHLTQIEEVWASNNGLSSFEEVERELRDKEKLETVYFEGNPLQTKN 322
Query: 298 PN-YRRKIKLVCPWIVQIDAT 317
P YR K++L P + QIDAT
Sbjct: 323 PALYRNKVRLALPQLKQIDAT 343
>gi|336370361|gb|EGN98701.1| hypothetical protein SERLA73DRAFT_181299 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383156|gb|EGO24305.1| hypothetical protein SERLADRAFT_467390 [Serpula lacrymans var.
lacrymans S7.9]
Length = 345
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/297 (43%), Positives = 188/297 (63%), Gaps = 13/297 (4%)
Query: 36 DNPDEESEAETTESKAEDE-----ESKEVCIERLLLRWNLIKKI--ENIHMLTTLKELEL 88
D PD+ E E ++ E + ++RL LR N I ++ E + T L+EL+L
Sbjct: 46 DYPDDTEELELIHARLSSLNNLRLERFALHLKRLSLRQNAISQLDPEVFSLFTKLEELDL 105
Query: 89 YDNQLT-VIENLDTLINLEILDLSFNRIREIKG-LDHLANLEKLYLCSNKISKIENVDHL 146
YDN++ V + L+ L +L LDLSFN +R + L +L +L+ +Y N+ISKI + +
Sbjct: 106 YDNKIKEVGDALNKLSDLTTLDLSFNLLRSVPDTLSYLRSLQTVYFVQNRISKITGLQSI 165
Query: 147 KK-LKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRT 205
L+ LELG NKIR IENLD L NLEEL+LGKNK+ +++NL +L +L ILSLQ NR+
Sbjct: 166 GATLRSLELGGNKIRTIENLDTLVNLEELWLGKNKLVKLENLGNLKRLKILSLQSNRITK 225
Query: 206 IENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWIN 265
IE LE L +L +LYLS NG+ +E L N+K++TLD+ N + I+NI+HL+ L+E W+N
Sbjct: 226 IEGLEGLEDLEELYLSHNGVEKLEGLEHNKKIKTLDLGNNFVPKIENISHLSVLEELWLN 285
Query: 266 DNQVSDWNTV-NVLENNKQLQTIYLDRNPV--AQDPNYRRKIKLVCPWIVQIDATLA 319
N++ + + L++ L+TIYL+ NP A+ NYRRKI L P + QIDAT A
Sbjct: 286 GNKIPNLQGLEQQLKSISTLETIYLEANPCQEAEGANYRRKIMLALPQLTQIDATFA 342
>gi|444320731|ref|XP_004181022.1| hypothetical protein TBLA_0E04500 [Tetrapisispora blattae CBS 6284]
gi|387514065|emb|CCH61503.1| hypothetical protein TBLA_0E04500 [Tetrapisispora blattae CBS 6284]
Length = 347
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/265 (45%), Positives = 174/265 (65%), Gaps = 10/265 (3%)
Query: 64 LLLRWNLIKKIENIHMLT--TLKELELYDNQLTVIE-NLDTLINLEILDLSFNRIREIKG 120
L LR NL++ I + +L TL EL+ YDN++ I N++ LINLE LD SFN+I+ IK
Sbjct: 80 LCLRQNLVESISEVEVLPADTLVELDFYDNRIKHISANVNKLINLESLDFSFNKIKNIKN 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII--ENLDGLTNLEELYLGK 178
+D L NL+ LY NKISK+EN+ LK L LELG N++ + ++ GL LEE++LGK
Sbjct: 140 IDKLVNLKYLYFVQNKISKVENLSTLKNLVSLELGGNRLTDLHPDSFVGLDKLEEIWLGK 199
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N I R+ NL+ L L ILS+Q NRL+ +E L+ LTNL +LY+S N ++ IENL N KL
Sbjct: 200 NMIPRLINLSPLKSLKILSIQGNRLKKLEGLDELTNLEELYVSHNQISKIENLEKNLKLT 259
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQV--SDWNTVNVLENNKQLQTIYLDRNPVA- 295
T+D++ NKI+ I+N++HL L + W + NQ+ S + L++ + +TIYL+ NP+
Sbjct: 260 TVDISSNKITKIENVSHLKMLTDLWCSFNQIDQSFESLGEELKDLSRFETIYLEGNPIQL 319
Query: 296 -QDPNYRRKIKLVCPWIV-QIDATL 318
+ +YRRK+ L P + +IDAT
Sbjct: 320 NNETSYRRKLILNLPKSLNKIDATF 344
>gi|149247695|ref|XP_001528256.1| protein phosphatases PP1 regulatory subunit SDS22 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146448210|gb|EDK42598.1| protein phosphatases PP1 regulatory subunit SDS22 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 393
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/268 (44%), Positives = 175/268 (65%), Gaps = 6/268 (2%)
Query: 56 SKEVCIERLLLRWNLIKKIENI-HMLTTLKELELYDNQLTVIEN-LDTLINLEILDLSFN 113
S+ +E L LR NLI I + ++ ++L+EL+LYDN++ I + + L L+ LDLSFN
Sbjct: 122 SRFTKLESLCLRQNLITSIVGVKNIASSLEELDLYDNRINHISSSIKHLTKLQNLDLSFN 181
Query: 114 RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEE 173
I+ IK L+ L LE LY +NKI +I+N+D L KL+ LELG NKI +IENLD N+ +
Sbjct: 182 LIKNIKNLESLVELENLYFVANKIREIKNLDTLTKLRNLELGGNKIEVIENLDKNINITQ 241
Query: 174 LYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLS 233
L+LGKN+I ++ NL L L +LS+Q NR+ I+ L+ L NL +LYLS NG+ IE L +
Sbjct: 242 LWLGKNRIYKLQNLDPLVNLRVLSIQSNRISKIQGLDNLKNLEELYLSHNGIEKIEGLEN 301
Query: 234 NEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRN 292
N L+ LDV NK++ + + HLT+L +FW + N+V + V L +L+ +Y + N
Sbjct: 302 NVNLQVLDVTSNKLTDLSGLKHLTKLTDFWCSYNKVLSFKNVEEQLGKLPELECVYFEGN 361
Query: 293 PV-AQDPN-YRRKIKLV-CPWIVQIDAT 317
P+ ++P YRRK+KL+ P + +IDAT
Sbjct: 362 PLQTENPTAYRRKLKLILGPSLNKIDAT 389
>gi|242802814|ref|XP_002484049.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Talaromyces stipitatus ATCC 10500]
gi|218717394|gb|EED16815.1| protein phosphatase PP1 regulatory subunit Sds22, putative
[Talaromyces stipitatus ATCC 10500]
Length = 314
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/261 (45%), Positives = 175/261 (67%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ RL LR N I +IE ++ TLKEL+LYDN ++ ++ LD L NL +LDLSFN+I+ IK
Sbjct: 49 LARLCLRQNQISRIELPSNLGQTLKELDLYDNLISHVKGLDDLTNLTLLDLSFNKIKHIK 108
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL L ++ N+IS IE +D L L+ LELG N+IR I+ LD L LE+L+LGKN
Sbjct: 109 NVSHLTELTDIFFVQNRISTIEGLDELVHLRNLELGANRIREIQGLDNLRALEQLWLGKN 168
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + NL+SL+ L ILS+Q NRL +I L L +L +LY+S N LT + L SN L
Sbjct: 169 KITEMKNLSSLSNLKILSIQSNRLTSITGLSDLHSLEELYISHNALTDLSGLESNTNLRV 228
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQD 297
LD + N++S ++ I+HLT+++E W ++N +S + V L + ++L+T+Y + NP+ ++
Sbjct: 229 LDFSNNQVSKLEGISHLTQIEEVWASNNGLSSFEEVERELRDKEKLETVYFEGNPLQTKN 288
Query: 298 PN-YRRKIKLVCPWIVQIDAT 317
P YR K++L P + QIDAT
Sbjct: 289 PALYRNKVRLALPQLKQIDAT 309
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 85/151 (56%), Gaps = 4/151 (2%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V + L L N I++I+ + L L++L L N++T ++NL +L NL+IL + NR+ I
Sbjct: 136 VHLRNLELGANRIREIQGLDNLRALEQLWLGKNKITEMKNLSSLSNLKILSIQSNRLTSI 195
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
GL L +LE+LY+ N ++ + ++ L+VL+ +N++ +E + LT +EE++
Sbjct: 196 TGLSDLHSLEELYISHNALTDLSGLESNTNLRVLDFSNNQVSKLEGISHLTQIEEVWASN 255
Query: 179 NKISRID----NLASLTKLNILSLQCNRLRT 205
N +S + L KL + + N L+T
Sbjct: 256 NGLSSFEEVERELRDKEKLETVYFEGNPLQT 286
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 23/143 (16%)
Query: 165 LDGLTNLEELYLGKNKISRI----------------DNLASLTK-------LNILSLQCN 201
L+ T L L L +N+ISRI DNL S K L +L L N
Sbjct: 43 LERFTKLARLCLRQNQISRIELPSNLGQTLKELDLYDNLISHVKGLDDLTNLTLLDLSFN 102
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
+++ I+N+ LT LT ++ +N ++TIE L L L++ N+I IQ + +L L++
Sbjct: 103 KIKHIKNVSHLTELTDIFFVQNRISTIEGLDELVHLRNLELGANRIREIQGLDNLRALEQ 162
Query: 262 FWINDNQVSDWNTVNVLENNKQL 284
W+ N++++ ++ L N K L
Sbjct: 163 LWLGKNKITEMKNLSSLSNLKIL 185
>gi|154280336|ref|XP_001540981.1| protein phosphatases PP1 regulatory subunit sds22 [Ajellomyces
capsulatus NAm1]
gi|150412924|gb|EDN08311.1| protein phosphatases PP1 regulatory subunit sds22 [Ajellomyces
capsulatus NAm1]
Length = 324
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 137/194 (70%)
Query: 82 TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIE 141
TL +L+LYDN +T I+ LD L L LD+SFN+I+ IK + HL +L+ LY N+I KIE
Sbjct: 118 TLTDLDLYDNLITRIKGLDALTKLTNLDISFNKIKHIKNISHLVHLKDLYFVQNRIQKIE 177
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
+D LK L+ LEL N+IR IENLD LT LEEL+LGKNKI+ I N+ +LT L I+SL N
Sbjct: 178 GLDGLKALRNLELAANRIREIENLDDLTALEELWLGKNKITEIKNIDALTNLKIISLPSN 237
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
RL TI L L NL +LY+S N LT I L +N L LD++ N+IS ++NI+HL+ L+E
Sbjct: 238 RLTTISGLSNLHNLEELYVSHNALTAISGLENNANLRVLDISSNQISKLENISHLSHLEE 297
Query: 262 FWINDNQVSDWNTV 275
FW ++NQ++ ++ V
Sbjct: 298 FWASNNQLASFDEV 311
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 100/164 (60%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
+ +N IK I+NI L LK+L N++ IE LD L L L+L+ NRIREI+ LD L
Sbjct: 146 ISFNKIKHIKNISHLVHLKDLYFVQNRIQKIEGLDGLKALRNLELAANRIREIENLDDLT 205
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
LE+L+L NKI++I+N+D L LK++ L N++ I L L NLEELY+ N ++ I
Sbjct: 206 ALEELWLGKNKITEIKNIDALTNLKIISLPSNRLTTISGLSNLHNLEELYVSHNALTAIS 265
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
L + L +L + N++ +EN+ L++L + + S N L + +
Sbjct: 266 GLENNANLRVLDISSNQISKLENISHLSHLEEFWASNNQLASFD 309
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 100/191 (52%), Gaps = 8/191 (4%)
Query: 105 LEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKK-LKVLELGDNKIRIIE 163
+E +DL RI + L +LE+ N+IS+I ++L L L+L DN I I+
Sbjct: 78 VEDIDLVNCRISSLPAL----HLERFTHLENQISQINFPENLGPTLTDLDLYDNLITRIK 133
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
LD LT L L + NKI I N++ L L L NR++ IE L+ L L L L+ N
Sbjct: 134 GLDALTKLTNLDISFNKIKHIKNISHLVHLKDLYFVQNRIQKIEGLDGLKALRNLELAAN 193
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
+ IENL LE L + NKI+ I+NI LT L+ + N+++ T++ L N
Sbjct: 194 RIREIENLDDLTALEELWLGKNKITEIKNIDALTNLKIISLPSNRLT---TISGLSNLHN 250
Query: 284 LQTIYLDRNPV 294
L+ +Y+ N +
Sbjct: 251 LEELYVSHNAL 261
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 22/122 (18%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L L N I++IEN+ LT L+EL L N++T I+N+D L NL+I+ L NR+ I
Sbjct: 184 ALRNLELAANRIREIENLDDLTALEELWLGKNKITEIKNIDALTNLKIISLPSNRLTTIS 243
Query: 120 GLDHLANLEKLY----------------------LCSNKISKIENVDHLKKLKVLELGDN 157
GL +L NLE+LY + SN+ISK+EN+ HL L+ +N
Sbjct: 244 GLSNLHNLEELYVSHNALTAISGLENNANLRVLDISSNQISKLENISHLSHLEEFWASNN 303
Query: 158 KI 159
++
Sbjct: 304 QL 305
>gi|449543156|gb|EMD34133.1| hypothetical protein CERSUDRAFT_159591 [Ceriporiopsis subvermispora
B]
Length = 367
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 124/265 (46%), Positives = 175/265 (66%), Gaps = 8/265 (3%)
Query: 61 IERLLLRWNLIKKIEN--IHMLTTLKELELYDNQL-TVIENLDTLINLEILDLSFNRIRE 117
+ +L LR N I ++ I+ L L+EL+LYDN++ T+ ++L+ L NL LDLSFN +R
Sbjct: 100 LRKLCLRQNYISNLDPDVINTLKKLEELDLYDNKIKTLGDSLNELSNLSTLDLSFNLLRH 159
Query: 118 IK-GLDHLANLEKLYLCSNKISKIENVDHLKK-LKVLELGDNKIRIIENLDGLTNLEELY 175
I LDHL +L+ ++ NKIS I + ++ L+ LELG N+IR IE LD L NLEEL+
Sbjct: 160 IPDALDHLPSLQTVFFVQNKISHIAGLTNVGATLRSLELGGNRIRRIEGLDALVNLEELW 219
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LGKNKIS+++NL L KL ILS+Q NR+ +E LE L NL +LYLS NG+ IE L N
Sbjct: 220 LGKNKISKLENLGHLEKLKILSIQSNRITKLEGLEELENLEELYLSHNGIERIEGLEKNL 279
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV 294
KL TLD+ N + ++N++HLT L+E WINDN++ + L++ L+T+YL+ NP
Sbjct: 280 KLRTLDIGTNFLKELENVSHLTNLEELWINDNKIETLQALEPQLKHISTLETVYLEGNPC 339
Query: 295 --AQDPNYRRKIKLVCPWIVQIDAT 317
+ +YRRK+ L P I Q+DAT
Sbjct: 340 QKTEGAHYRRKVILALPQIKQLDAT 364
>gi|392580362|gb|EIW73489.1| hypothetical protein TREMEDRAFT_24836 [Tremella mesenterica DSM
1558]
Length = 361
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/268 (45%), Positives = 165/268 (61%), Gaps = 11/268 (4%)
Query: 61 IERLLLRWN-LIKKI--ENIHMLTTLKELELYDNQLTVI---ENLDTLINLEILDLSFNR 114
++RL LR N LI + + + L L+E++LYDN+L + E L N+ LDLSFN
Sbjct: 89 LKRLCLRQNELISPLPPQALDGLEELEEIDLYDNRLGPVVEDEELKGCKNVTSLDLSFNN 148
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIEN--VD-HLKKLKVLELGDNKIRIIENLDGLTNL 171
IR L + + LYL NKIS +E +D LK LELG N+IR IENLD L L
Sbjct: 149 IRHPPTLPSMKQVNTLYLVQNKISHVEEGCLDWAAGSLKSLELGGNRIRAIENLDQLVLL 208
Query: 172 EELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
EEL+LGKNKI ++NL + T L ILSLQ NR+ I+ LE L +L +LYLS NG+ IE L
Sbjct: 209 EELWLGKNKIRILENLTTFTNLRILSLQSNRITKIQGLENLISLEELYLSHNGIKKIEGL 268
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLD 290
N KL TLD+ N + I+ I+HL +L+EFW ++NQ+ + + + L L T+YL+
Sbjct: 269 EKNVKLTTLDIGNNMVEEIEGISHLVQLEEFWASNNQIQNLSALETQLSPLPNLTTVYLE 328
Query: 291 RNPV-AQDPNYRRKIKLVCPWIVQIDAT 317
NP + D NYRRK+ L P + Q+DAT
Sbjct: 329 GNPCQSNDVNYRRKVILALPQVQQVDAT 356
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 72/125 (57%), Gaps = 4/125 (3%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V +E L L N I+ +EN+ T L+ L L N++T I+ L+ LI+LE L LS N I++I
Sbjct: 206 VLLEELWLGKNKIRILENLTTFTNLRILSLQSNRITKIQGLENLISLEELYLSHNGIKKI 265
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLD----GLTNLEEL 174
+GL+ L L + +N + +IE + HL +L+ +N+I+ + L+ L NL +
Sbjct: 266 EGLEKNVKLTTLDIGNNMVEEIEGISHLVQLEEFWASNNQIQNLSALETQLSPLPNLTTV 325
Query: 175 YLGKN 179
YL N
Sbjct: 326 YLEGN 330
>gi|344302918|gb|EGW33192.1| hypothetical protein SPAPADRAFT_60516, partial [Spathaspora
passalidarum NRRL Y-27907]
Length = 352
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/254 (45%), Positives = 164/254 (64%), Gaps = 5/254 (1%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIEN-LDTLINLEILDLSFN 113
S+ ++ L LR NLI I I + +L EL+LYDN++ I + + L L+ LD SFN
Sbjct: 99 SRFTKLQSLCLRQNLITSIVGIKEIADSLTELDLYDNRINHISSSIKHLTKLKNLDFSFN 158
Query: 114 RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEE 173
I+ IK ++ L LE LY NKI I+N+++L KLK LELG NKI IENLD N+E+
Sbjct: 159 LIKNIKNIETLVELENLYFVQNKIKHIQNLENLTKLKNLELGGNKIEKIENLDNNVNIEQ 218
Query: 174 LYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLS 233
L+LGKN+I + +NL + L +LS+Q NR+ IE LE L NL +LYLS NG+ IENL
Sbjct: 219 LWLGKNRIYKFENLNHMVNLRVLSIQSNRITKIEGLENLINLEELYLSHNGIEKIENLEH 278
Query: 234 NEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRN 292
N L+ LDV NK+ I+N+ HLT+L +FW + NQ+S + + L ++L T+Y + N
Sbjct: 279 NVNLQVLDVTSNKLKHIENLKHLTKLTDFWCSYNQISSFEEIGKELGKLEELDTVYFEGN 338
Query: 293 PV-AQDPN-YRRKI 304
PV ++P+ YRRK+
Sbjct: 339 PVQTENPSAYRRKM 352
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 103/211 (48%), Gaps = 27/211 (12%)
Query: 98 NLDTLINLEILDLSFNRIREIKGLDHLAN-LEKLYLCSNKISKIEN-VDHLKKLKVLELG 155
NL L+ L L N I I G+ +A+ L +L L N+I+ I + + HL KLK L+
Sbjct: 97 NLSRFTKLQSLCLRQNLITSIVGIKEIADSLTELDLYDNRINHISSSIKHLTKLKNLDFS 156
Query: 156 DNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNL 215
N I+ I+N++ L LE LY +NKI I NL +LTKL L L N++ IENL+ N+
Sbjct: 157 FNLIKNIKNIETLVELENLYFVQNKIKHIQNLENLTKLKNLELGGNKIEKIENLDNNVNI 216
Query: 216 TQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV 275
QL+L +N + ENL L L + N+I+ I+ + +L L+E
Sbjct: 217 EQLWLGKNRIYKFENLNHMVNLRVLSIQSNRITKIEGLENLINLEE-------------- 262
Query: 276 NVLENNKQLQTIYLDRNPVAQDPNYRRKIKL 306
+YL N + + N + L
Sbjct: 263 -----------LYLSHNGIEKIENLEHNVNL 282
>gi|346326778|gb|EGX96374.1| protein phosphatases PP1 regulatory subunit sds22 [Cordyceps
militaris CM01]
Length = 445
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 185/302 (61%), Gaps = 23/302 (7%)
Query: 38 PDEESEAETTESKAEDEESKEV--------CIERL-----------LLRWNLIKKIENIH 78
P EE A+ + ED E+K++ +ERL LR N I++IE +
Sbjct: 114 PGEEIAADEDLLENEDPETKQINVTHSRVGSMERLRLDRFQKVVQICLRQNNIQRIEGLD 173
Query: 79 MLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKI 137
L TL++L+LYDN + I L+ L L LDLSFN+I+ IK ++HL +L+ LY +NKI
Sbjct: 174 ALGGTLEDLDLYDNLIAHIRGLEHLTKLTNLDLSFNKIKHIKNVNHLKDLKTLYFVANKI 233
Query: 138 SKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILS 197
IEN+D L K+ LELG N+IR I+NLD LT +EEL+L KNKI+ + NL L +L +LS
Sbjct: 234 KDIENLDGLNKITSLELGSNRIREIKNLDTLTGIEELWLAKNKITTLANLGGLPRLRLLS 293
Query: 198 LQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLT 257
+Q NR++ + L+ + L +LY+S N +T++E L +N L T+DV +NKI + + L
Sbjct: 294 IQSNRIQDLSPLKEVPQLEELYISHNLVTSLEGLEANVNLTTVDVGHNKIDSLAGLGPLA 353
Query: 258 ELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVA-QDPN-YRRKIKLVCPWIVQI 314
+L+E W + N + D+ V L++ +QL T+Y + NP+ + P YR K++L P + QI
Sbjct: 354 KLEEVWASYNLIMDFADVERALKDKEQLTTVYFEGNPLQLRAPALYRNKVRLALPQLKQI 413
Query: 315 DA 316
DA
Sbjct: 414 DA 415
>gi|4633068|gb|AAD26612.1| protein phosphatase-1 regulatory subunit 7 beta1 [Homo sapiens]
gi|15214546|gb|AAH12397.1| PPP1R7 protein [Homo sapiens]
gi|15278126|gb|AAH13001.1| PPP1R7 protein [Homo sapiens]
gi|30583431|gb|AAP35960.1| protein phosphatase 1, regulatory subunit 7 [Homo sapiens]
Length = 280
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 134/174 (77%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 160 VDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENN 273
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 134/215 (62%), Gaps = 3/215 (1%)
Query: 74 IENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLC 133
+E I++ ++++L ++ IE + L ++ L L N I+ I+ L+ L +L +L L
Sbjct: 69 METINLDRDAEDVDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLY 128
Query: 134 SNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKL 193
N+I KIEN++ L +L++L++ N +R IE +D LT L++L+L NKIS+I+NL++L +L
Sbjct: 129 DNQIKKIENLEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQL 188
Query: 194 NILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNI 253
+L L NR+R IEN++ LTNL L+L +N +T ++NL + L L + N+++ I+ +
Sbjct: 189 QMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGL 248
Query: 254 AHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIY 288
+L L+E +++ N + + LENN Q Y
Sbjct: 249 QNLVNLRELYLSHNGIE---VIEGLENNVQDSLTY 280
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 25/164 (15%)
Query: 136 KISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNI 195
+I KIE + LKK+K L L N I+ IENL+ L +L EL L N+I +I+NL +LT+L I
Sbjct: 87 RIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEI 146
Query: 196 LSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAH 255
L + N LR IE ++ LT L +L+L N ++ IENL + +L+ L++ N+I I+NI
Sbjct: 147 LDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDT 206
Query: 256 LTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPN 299
LT L++++L +N + + N
Sbjct: 207 LT-------------------------NLESLFLGKNKITKLQN 225
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 110/192 (57%), Gaps = 9/192 (4%)
Query: 106 EILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENL 165
E +DL+ RI +I+G + L ++ L L N I IEN++ L+ L+ L+L DN+I+ IENL
Sbjct: 79 EDVDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENL 138
Query: 166 DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLY---LSE 222
+ LT LE L + N + I+ + LT+L L L N++ IENL +NL QL L
Sbjct: 139 EALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENL---SNLHQLQMLELGS 195
Query: 223 NGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNK 282
N + IEN+ + LE+L + NKI+ +QN+ LT L + N+++ + L+N
Sbjct: 196 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLT---KIEGLQNLV 252
Query: 283 QLQTIYLDRNPV 294
L+ +YL N +
Sbjct: 253 NLRELYLSHNGI 264
>gi|401400624|ref|XP_003880821.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325115233|emb|CBZ50788.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 396
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 173/284 (60%), Gaps = 21/284 (7%)
Query: 55 ESKEVC--IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSF 112
E+ ++C ++ L L N I+KIEN+ L+ELELY N++ IE L TL++L +LDLSF
Sbjct: 85 ENLQMCPHLKSLALNANDIEKIENLEATPQLEELELYQNRVRKIEGLSTLVHLRLLDLSF 144
Query: 113 NRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLE 172
N+IR+I+ L NL KLYL SNKI IE ++ L L++LELG NKIR I + LT L
Sbjct: 145 NKIRKIENLATAVNLVKLYLSSNKIEVIEGLEALTHLELLELGSNKIREIRGIATLTELT 204
Query: 173 ELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIEN--LEALTNLTQLYLSENGL----- 225
EL+LGKNKI+ + L SL KL LS+Q NRL ++ A NL +LYLS N L
Sbjct: 205 ELWLGKNKITEM-KLPSLPKLQRLSIQSNRLTHWDDSLFSACPNLEELYLSHNRLEGPIP 263
Query: 226 ---------TTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN 276
++ L +KL+ LD+ N + ++ +A L EL+E WINDN+++ V
Sbjct: 264 DGVGKLMHGVDLDLLRVQKKLKILDLGANAVDDMRAVAQLPELEELWINDNKLASLEAVK 323
Query: 277 VLENNKQLQTIYLDRNPVAQD--PNYRRKIKLVCPWIVQIDATL 318
L++ L+T+YL+ NP+ + P+YR+ I + P + Q+DA L
Sbjct: 324 ALQSMSSLRTLYLEGNPIHANLGPSYRQNIVQIFPQLRQLDALL 367
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 85/138 (61%)
Query: 134 SNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKL 193
+++I KIEN+ LK L L N I IENL+ LEEL L +N++ +I+ L++L L
Sbjct: 78 TSRIHKIENLQMCPHLKSLALNANDIEKIENLEATPQLEELELYQNRVRKIEGLSTLVHL 137
Query: 194 NILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNI 253
+L L N++R IENL NL +LYLS N + IE L + LE L++ NKI I+ I
Sbjct: 138 RLLDLSFNKIRKIENLATAVNLVKLYLSSNKIEVIEGLEALTHLELLELGSNKIREIRGI 197
Query: 254 AHLTELQEFWINDNQVSD 271
A LTEL E W+ N++++
Sbjct: 198 ATLTELTELWLGKNKITE 215
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 135/268 (50%), Gaps = 12/268 (4%)
Query: 25 VENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLK 84
+E + +S D+E+ AET S A + + E L + E +T L+
Sbjct: 1 METSSATTLSPQTDDKETAAETRRSVAPPQGEERKSPEHALSTGESESEGEAGSHVTYLR 60
Query: 85 ELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVD 144
L V +L+ + EI++ +RI +I+ L +L+ L L +N I KIEN++
Sbjct: 61 --------LGV--DLELQPSCEIVNYQTSRIHKIENLQMCPHLKSLALNANDIEKIENLE 110
Query: 145 HLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR 204
+L+ LEL N++R IE L L +L L L NKI +I+NLA+ L L L N++
Sbjct: 111 ATPQLEELELYQNRVRKIEGLSTLVHLRLLDLSFNKIRKIENLATAVNLVKLYLSSNKIE 170
Query: 205 TIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWI 264
IE LEALT+L L L N + I + + +L L + NKI+ ++ + L +LQ I
Sbjct: 171 VIEGLEALTHLELLELGSNKIREIRGIATLTELTELWLGKNKITEMK-LPSLPKLQRLSI 229
Query: 265 NDNQVSDWNTVNVLENNKQLQTIYLDRN 292
N+++ W+ ++ L+ +YL N
Sbjct: 230 QSNRLTHWDD-SLFSACPNLEELYLSHN 256
>gi|32880137|gb|AAP88899.1| protein phosphatase 1, regulatory subunit 7 [synthetic construct]
Length = 281
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 134/174 (77%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 100 VKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEG 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 160 VDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 219
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
I+++ NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N
Sbjct: 220 ITKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENN 273
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 135/216 (62%), Gaps = 3/216 (1%)
Query: 74 IENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLC 133
+E I++ ++++L ++ IE + L ++ L L N I+ I+ L+ L +L +L L
Sbjct: 69 METINLDRDAEDVDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLY 128
Query: 134 SNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKL 193
N+I KIEN++ L +L++L++ N +R IE +D LT L++L+L NKIS+I+NL++L +L
Sbjct: 129 DNQIKKIENLEALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQL 188
Query: 194 NILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNI 253
+L L NR+R IEN++ LTNL L+L +N +T ++NL + L L + N+++ I+ +
Sbjct: 189 QMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKIEGL 248
Query: 254 AHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL 289
+L L+E +++ N + + LENN Q YL
Sbjct: 249 QNLVNLRELYLSHNGIE---VIEGLENNVQDSLTYL 281
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 25/164 (15%)
Query: 136 KISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNI 195
+I KIE + LKK+K L L N I+ IENL+ L +L EL L N+I +I+NL +LT+L I
Sbjct: 87 RIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEI 146
Query: 196 LSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAH 255
L + N LR IE ++ LT L +L+L N ++ IENL + +L+ L++ N+I I+NI
Sbjct: 147 LDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDT 206
Query: 256 LTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPN 299
LT L++++L +N + + N
Sbjct: 207 LT-------------------------NLESLFLGKNKITKLQN 225
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 110/192 (57%), Gaps = 9/192 (4%)
Query: 106 EILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENL 165
E +DL+ RI +I+G + L ++ L L N I IEN++ L+ L+ L+L DN+I+ IENL
Sbjct: 79 EDVDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENL 138
Query: 166 DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLY---LSE 222
+ LT LE L + N + I+ + LT+L L L N++ IENL +NL QL L
Sbjct: 139 EALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENL---SNLHQLQMLELGS 195
Query: 223 NGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNK 282
N + IEN+ + LE+L + NKI+ +QN+ LT L + N+++ + L+N
Sbjct: 196 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLT---KIEGLQNLV 252
Query: 283 QLQTIYLDRNPV 294
L+ +YL N +
Sbjct: 253 NLRELYLSHNGI 264
>gi|159485280|ref|XP_001700674.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272106|gb|EDO97912.1| predicted protein [Chlamydomonas reinhardtii]
Length = 315
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 159/242 (65%), Gaps = 7/242 (2%)
Query: 82 TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHL--ANLEKLYLCSNKISK 139
+++LEL DN L+VI +L L L+ S+N+IR + L L LE+LY+ SNK++
Sbjct: 71 AMEDLELRDNHLSVIPSLKGFTELRRLECSYNQIRNLLPLADLDSTKLEELYVASNKVTA 130
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
+ + HL L +LELG N+IR IEN++ LT L EL+LG+N+I+++D LA+LT L +SLQ
Sbjct: 131 MAALSHLGALTLLELGSNRIRAIENIETLTGLRELWLGRNRIAKVDGLATLTNLRRISLQ 190
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS--IIQNIAHLT 257
NRL ++ LE T+L +LYLS NG++T+E L +L+ LDV+ N+I+ + ++ LT
Sbjct: 191 SNRLTSMSGLEHCTSLEELYLSHNGISTLEGLAPLGRLKILDVSSNRITQLHVADLVALT 250
Query: 258 ELQEFWINDNQVSDWNTV--NVLENNKQ-LQTIYLDRNPVAQDPNYRRKIKLVCPWIVQI 314
+L++ W+NDNQ+ + L+ + L IYL+ NP AQDP Y+RK+ + P + Q+
Sbjct: 251 QLEDLWLNDNQLPAIDAALDKALDPVRHSLTCIYLEGNPAAQDPQYKRKLTNMLPKLKQL 310
Query: 315 DA 316
D+
Sbjct: 311 DS 312
>gi|4633069|gb|AAD26613.1| protein phosphatase-1 regulatory subunit 7 beta2 [Homo sapiens]
Length = 237
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/229 (51%), Positives = 153/229 (66%), Gaps = 18/229 (7%)
Query: 24 AVENTHGNQMSLDNPDEESE----AETT--ESKAEDE----------ESKEVC--IERLL 65
A E G Q S + +EE E ET + AED E EV ++ L
Sbjct: 2 AAERGAGQQQSQEMMEEEHELPVDMETINLDRDAEDVDLNHYRIGKIEGFEVLKKVKTLC 61
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G+D L
Sbjct: 62 LRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEGVDKLT 121
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
L+KL+L +NKISKIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNKI+++
Sbjct: 122 RLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQ 181
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
NL +LT L +LS+Q NRL IE L+ L NL +LYLS NG+ IE L +N
Sbjct: 182 NLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIEVIEGLENN 230
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 144/243 (59%), Gaps = 7/243 (2%)
Query: 46 TTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINL 105
E A ++S+E+ E L +E I++ ++++L ++ IE + L +
Sbjct: 2 AAERGAGQQQSQEMMEEE----HELPVDMETINLDRDAEDVDLNHYRIGKIEGFEVLKKV 57
Query: 106 EILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENL 165
+ L L N I+ I+ L+ L +L +L L N+I KIEN++ L +L++L++ N +R IE +
Sbjct: 58 KTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEILDISFNLLRNIEGV 117
Query: 166 DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGL 225
D LT L++L+L NKIS+I+NL++L +L +L L NR+R IEN++ LTNL L+L +N +
Sbjct: 118 DKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNKI 177
Query: 226 TTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQ 285
T ++NL + L L + N+++ I+ + +L L+E +++ N + + LENN Q
Sbjct: 178 TKLQNLDALTNLTVLSMQSNRLTKIEGLQNLVNLRELYLSHNGIE---VIEGLENNVQDS 234
Query: 286 TIY 288
Y
Sbjct: 235 LTY 237
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 25/164 (15%)
Query: 136 KISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNI 195
+I KIE + LKK+K L L N I+ IENL+ L +L EL L N+I +I+NL +LT+L I
Sbjct: 44 RIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEI 103
Query: 196 LSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAH 255
L + N LR IE ++ LT L +L+L N ++ IENL + +L+ L++ N+I I+NI
Sbjct: 104 LDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENLSNLHQLQMLELGSNRIRAIENIDT 163
Query: 256 LTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPN 299
LT L++++L +N + + N
Sbjct: 164 LT-------------------------NLESLFLGKNKITKLQN 182
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 110/192 (57%), Gaps = 9/192 (4%)
Query: 106 EILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENL 165
E +DL+ RI +I+G + L ++ L L N I IEN++ L+ L+ L+L DN+I+ IENL
Sbjct: 36 EDVDLNHYRIGKIEGFEVLKKVKTLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENL 95
Query: 166 DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLY---LSE 222
+ LT LE L + N + I+ + LT+L L L N++ IENL +NL QL L
Sbjct: 96 EALTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENL---SNLHQLQMLELGS 152
Query: 223 NGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNK 282
N + IEN+ + LE+L + NKI+ +QN+ LT L + N+++ + L+N
Sbjct: 153 NRIRAIENIDTLTNLESLFLGKNKITKLQNLDALTNLTVLSMQSNRLT---KIEGLQNLV 209
Query: 283 QLQTIYLDRNPV 294
L+ +YL N +
Sbjct: 210 NLRELYLSHNGI 221
>gi|452985411|gb|EME85168.1| hypothetical protein MYCFIDRAFT_60080, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 358
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/261 (41%), Positives = 167/261 (63%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++RL LR N I+ +E TTL+ELELYDN L I+ ++ L ILDLS+N+++ IK
Sbjct: 93 LKRLCLRQNQIQHLELPETCKTTLEELELYDNLLKHIDGVEEYTELRILDLSYNKLKHIK 152
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ L L+ LY N+ISKIE ++ L L LELG N+IR IE L+ LT L+ L+LG+N
Sbjct: 153 RVSTLKKLDHLYFVQNRISKIEGLEELTNLTYLELGANRIREIEGLETLTKLDSLWLGQN 212
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + L++LT L LS+Q NRL +++ +EAL LT+LY+S+N +T++E L + KLE
Sbjct: 213 KITELKGLSTLTNLRTLSIQANRLSSLDGIEALPQLTELYISDNKVTSLEPLKACTKLEI 272
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVAQDP 298
LD N I+ + + L +L+ W ++ Q+ + V L++ ++L+ +Y + NP+ +
Sbjct: 273 LDFQTNPITSLVGLEDLKDLENIWASNCQIDSFQEVERALKDKEKLEEVYFEGNPLQRQN 332
Query: 299 N--YRRKIKLVCPWIVQIDAT 317
YR K++L P I +IDAT
Sbjct: 333 AVLYRNKVRLALPQISKIDAT 353
>gi|366986911|ref|XP_003673222.1| hypothetical protein NCAS_0A02730 [Naumovozyma castellii CBS 4309]
gi|342299085|emb|CCC66831.1| hypothetical protein NCAS_0A02730 [Naumovozyma castellii CBS 4309]
Length = 353
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 176/265 (66%), Gaps = 10/265 (3%)
Query: 64 LLLRWNLIKKIENIHMLT--TLKELELYDNQLTVIE-NLDTLINLEILDLSFNRIREIKG 120
L LR NLI+ I + +L T +L+LYDN++ I N++ L++L+ LDLSFN+I+ IK
Sbjct: 86 LCLRQNLIESITEVEVLPYDTFIDLDLYDNRIKHISSNVNKLVHLKNLDLSFNKIKNIKN 145
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIEN--LDGLTNLEELYLGK 178
+D L LE LY NKISKIEN+ LKKLK LELG N+I+ +E DGL NL+EL+LGK
Sbjct: 146 IDKLYELENLYFVQNKISKIENLSTLKKLKNLELGGNRIQALEPHAFDGLENLQELWLGK 205
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N I ++ NL L L ILS+Q NRL+ IE LE LTNL +LY+S N LT IE L +N+KL
Sbjct: 206 NAIPKLINLNPLKNLKILSIQANRLKKIEGLEELTNLEELYVSNNFLTKIEGLENNKKLT 265
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQV--SDWNTVNVLENNKQLQTIYLDRNPVA- 295
LD+ N+I+ I+N++HLTEL + W + NQV S + L + +TIYL+ NP+
Sbjct: 266 MLDITSNRITKIENVSHLTELTDLWCSFNQVDQSFQSLGEELGGLTKFETIYLEGNPIQL 325
Query: 296 -QDPNYRRKIKL-VCPWIVQIDATL 318
+ YRRK+ L + P + +IDAT
Sbjct: 326 NNETAYRRKLMLSLGPSLQKIDATF 350
>gi|355713184|gb|AES04593.1| protein phosphatase 1, regulatory subunit 7 [Mustela putorius furo]
Length = 256
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 132/171 (77%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LEILD+SFN +R I+G
Sbjct: 84 VKTLCLRQNLIKYIENLEELQSLRELDLYDNQIKKIENLEALTQLEILDISFNLLRNIEG 143
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKISKIEN+ L +L++LELG N+IR IEN+D LT+LE L+LGKNK
Sbjct: 144 VDKLTRLKKLFLVNNKISKIENISTLHQLQMLELGSNRIRAIENIDTLTSLESLFLGKNK 203
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
I+++ NL +LT L +LS+Q NRL +E L++L NL +LYLS NG+ IE L
Sbjct: 204 ITKLQNLDALTNLTVLSMQSNRLTKMEGLQSLVNLRELYLSHNGIEVIEGL 254
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 114/174 (65%)
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELG 155
IE D L ++ L L N I+ I+ L+ L +L +L L N+I KIEN++ L +L++L++
Sbjct: 75 IEGFDVLKKVKTLCLRQNLIKYIENLEELQSLRELDLYDNQIKKIENLEALTQLEILDIS 134
Query: 156 DNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNL 215
N +R IE +D LT L++L+L NKIS+I+N+++L +L +L L NR+R IEN++ LT+L
Sbjct: 135 FNLLRNIEGVDKLTRLKKLFLVNNKISKIENISTLHQLQMLELGSNRIRAIENIDTLTSL 194
Query: 216 TQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQV 269
L+L +N +T ++NL + L L + N+++ ++ + L L+E +++ N +
Sbjct: 195 ESLFLGKNKITKLQNLDALTNLTVLSMQSNRLTKMEGLQSLVNLRELYLSHNGI 248
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 85/164 (51%), Gaps = 25/164 (15%)
Query: 136 KISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNI 195
+I KIE D LKK+K L L N I+ IENL+ L +L EL L N+I +I
Sbjct: 71 RIGKIEGFDVLKKVKTLCLRQNLIKYIENLEELQSLRELDLYDNQIKKI----------- 119
Query: 196 LSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAH 255
ENLEALT L L +S N L IE + +L+ L + NKIS I+NI+
Sbjct: 120 -----------ENLEALTQLEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENIST 168
Query: 256 LTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPN 299
L +LQ + N++ ++ L + L++++L +N + + N
Sbjct: 169 LHQLQMLELGSNRIRAIENIDTLTS---LESLFLGKNKITKLQN 209
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 172 EELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
E++ L +I +I+ L K+ L L+ N ++ IENLE L +L +L L +N + IENL
Sbjct: 63 EDVDLNHYRIGKIEGFDVLKKVKTLCLRQNLIKYIENLEELQSLRELDLYDNQIKKIENL 122
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
+ +LE LD+++N + I+ + LT L++ ++ +N++S ++ L QLQ + L
Sbjct: 123 EALTQLEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKIENISTLH---QLQMLELGS 179
Query: 292 NPV 294
N +
Sbjct: 180 NRI 182
>gi|242061058|ref|XP_002451818.1| hypothetical protein SORBIDRAFT_04g008200 [Sorghum bicolor]
gi|241931649|gb|EES04794.1| hypothetical protein SORBIDRAFT_04g008200 [Sorghum bicolor]
Length = 344
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 168/264 (63%), Gaps = 9/264 (3%)
Query: 61 IERLLLRWNL-----IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+ +L R NL + + + + L+EL L DN+LT I + L + D+SFN I
Sbjct: 78 LRKLSFRQNLLEDDAVAPLSSWETIAGLQELVLRDNKLTRIPDAGIFKGLLVFDVSFNEI 137
Query: 116 REIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
+ G+ +++ L++LY+ N+++K+E ++HL L++LELG N++R++ENL+ LTNL+EL
Sbjct: 138 SSLTGMSKVSSKLKELYVSKNEVAKMEELEHLHALEILELGSNRLRVMENLETLTNLQEL 197
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LG+N+I R NL L + +SLQ NRL +++ + T L +LYLS NG+ +E L +
Sbjct: 198 WLGRNRI-RAVNLCGLKLIKKISLQSNRLTSMDGFQECTALEELYLSHNGIQKMEGLSTL 256
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN--VLENNKQLQTIYLDRN 292
+ L LDV+ NK++ I+NI LT L++ W+NDNQ+ + + + + ++L TIYL+RN
Sbjct: 257 QNLRILDVSSNKLTTIENIETLTRLEDLWLNDNQIPSLDGIETALAGSREKLTTIYLERN 316
Query: 293 PVAQDPNYRRKIKLVCPWIVQIDA 316
P A+ P Y +K + P + QID+
Sbjct: 317 PCAKTPEYSSTLKKIFPKLEQIDS 340
>gi|83314761|ref|XP_730501.1| protein phosphatase-1 regulatory subunit 7 alpha2 [Plasmodium yoelii
yoelii 17XNL]
gi|23490241|gb|EAA22066.1| protein phosphatase-1 regulatory subunit 7 alpha2 [Plasmodium yoelii
yoelii]
Length = 1231
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 133/306 (43%), Positives = 192/306 (62%), Gaps = 16/306 (5%)
Query: 24 AVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIERLLLRW--NLIKKIENIHMLT 81
A N G + D + E+ S+ E+ E C + + L+ N I+KIEN+
Sbjct: 923 ATYNVLGEITTFD--ENETIISHQYSRIRKIENIEKCKKLMTLQLISNCIEKIENLENNV 980
Query: 82 TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIE 141
L+ LELY+N + IEN+ LINL++LDLSFN+I+ I+ LD L NLE+LYL SNKISKIE
Sbjct: 981 ELEHLELYENSIKKIENISMLINLKVLDLSFNKIKVIENLDALVNLEELYLSSNKISKIE 1040
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
N+++ K L++LELG NKIR IEN++ L NLEEL+LGKNKI +++ L L KL LSLQ N
Sbjct: 1041 NLENCKNLRLLELGYNKIRKIENIENLKNLEELWLGKNKIEQLE-LPELPKLKKLSLQHN 1099
Query: 202 RL-----RTIENLEALTNLTQLYLSENGLTTIENLLSNEK-LETLDVAYNKISIIQNIAH 255
RL ++I N+ + L +LYLS N L I + + K L+ LD+AYN+I I +
Sbjct: 1100 RLTKWDEKSINNVLS---LNELYLSYNKLNEINDKIKELKYLKVLDLAYNEIENILICSE 1156
Query: 256 LTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD--PNYRRKIKLVCPWIVQ 313
L L+E W+N+N + + + L+NN+ L+T+YL++N + + YR +I + P I Q
Sbjct: 1157 LKHLEELWLNNNNIKSLDMIIKLKNNENLKTLYLEKNEIQDNLKDTYRDQIISILPQIQQ 1216
Query: 314 IDATLA 319
+DA L
Sbjct: 1217 LDALLV 1222
>gi|400603179|gb|EJP70777.1| protein phosphatase 1 regulatory subunit SDS22 [Beauveria bassiana
ARSEF 2860]
Length = 386
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/259 (43%), Positives = 170/259 (65%), Gaps = 4/259 (1%)
Query: 63 RLLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
++ LR N I+ IE + L TL++L+LYDN ++ I LD L L LDLSFN+I+ IK +
Sbjct: 124 QICLRQNNIQHIEGLDELGGTLEDLDLYDNLISHIRGLDRLTKLTNLDLSFNKIKHIKHV 183
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
+HL L LY +NKI +IEN+D L K+ LELG N+IR I+NLD LT +EEL+L KNKI
Sbjct: 184 NHLKELRTLYFVANKIKEIENLDGLDKVTSLELGSNRIREIKNLDTLTGIEELWLAKNKI 243
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + NL L +L +LS+Q NR++ + L + L +LY+S N LT+++ L +N L T+D
Sbjct: 244 TELRNLGGLPRLRLLSIQSNRIQDLSPLREVPQLQELYISHNMLTSLQGLEANVNLTTID 303
Query: 242 VAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QDPN 299
+++NKI ++ + LT+L+E W + N + D+ V L + + L T+Y + NP+ + P
Sbjct: 304 ISHNKIDSLKGLGPLTKLEEVWASYNLIMDFADVERELADKEALTTVYFEGNPLQLRAPA 363
Query: 300 -YRRKIKLVCPWIVQIDAT 317
YR K++L P + QIDAT
Sbjct: 364 LYRNKVRLALPQLKQIDAT 382
>gi|443696780|gb|ELT97402.1| hypothetical protein CAPTEDRAFT_177567 [Capitella teleta]
Length = 180
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 121/175 (69%), Gaps = 8/175 (4%)
Query: 151 VLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLE 210
+LELG N+IR +ENLD T LE LY GKNKIS+++NL +L L +LS+Q NRL IENL
Sbjct: 1 MLELGSNRIRKLENLDTFTQLESLYAGKNKISKLENLDALVNLQVLSMQSNRLLRIENLS 60
Query: 211 ALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
L L QLYLS NGL IE L + L TLD+A N+I I N++HL LQEFW NDNQ++
Sbjct: 61 MLVQLDQLYLSNNGLENIEGLEALVNLTTLDLAANRIKRITNVSHLVNLQEFWFNDNQLA 120
Query: 271 DWNTVNVLENNKQLQTIYLDRNPV--------AQDPNYRRKIKLVCPWIVQIDAT 317
W ++ L+ K+L+T+YL+RNP+ QDPNYRRKI L PW+ QIDAT
Sbjct: 121 TWEDIDQLKPLKKLETVYLERNPIWHDATHQSKQDPNYRRKIMLALPWLRQIDAT 175
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 81/136 (59%), Gaps = 3/136 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I+K+EN+ T L+ L N+++ +ENLD L+NL++L + NR+ I+ L L L+
Sbjct: 7 NRIRKLENLDTFTQLESLYAGKNKISKLENLDALVNLQVLSMQSNRLLRIENLSMLVQLD 66
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR---ID 185
+LYL +N + IE ++ L L L+L N+I+ I N+ L NL+E + N+++ ID
Sbjct: 67 QLYLSNNGLENIEGLEALVNLTTLDLAANRIKRITNVSHLVNLQEFWFNDNQLATWEDID 126
Query: 186 NLASLTKLNILSLQCN 201
L L KL + L+ N
Sbjct: 127 QLKPLKKLETVYLERN 142
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I K+EN+ L L+ L + N+L IENL L+ L+ L LS N + I+GL+ L NL
Sbjct: 29 NKISKLENLDALVNLQVLSMQSNRLLRIENLSMLVQLDQLYLSNNGLENIEGLEALVNLT 88
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLD---GLTNLEELYLGKNKI 181
L L +N+I +I NV HL L+ DN++ E++D L LE +YL +N I
Sbjct: 89 TLDLAANRIKRITNVSHLVNLQEFWFNDNQLATWEDIDQLKPLKKLETVYLERNPI 144
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 61/95 (64%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V ++ L ++ N + +IEN+ ML L +L L +N L IE L+ L+NL LDL+ NRI+ I
Sbjct: 41 VNLQVLSMQSNRLLRIENLSMLVQLDQLYLSNNGLENIEGLEALVNLTTLDLAANRIKRI 100
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLE 153
+ HL NL++ + N+++ E++D LK LK LE
Sbjct: 101 TNVSHLVNLQEFWFNDNQLATWEDIDQLKPLKKLE 135
>gi|320588373|gb|EFX00842.1| protein phosphatase pp1 regulatory subunit [Grosmannia clavigera
kw1407]
Length = 438
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/393 (33%), Positives = 198/393 (50%), Gaps = 80/393 (20%)
Query: 3 VETVPNTDEVDNDNLVTLNVEAVENTHG---------------NQMSLDNPDEESE---- 43
ETVPNT+ D L ++ N+ G N +L +P+ E
Sbjct: 45 TETVPNTEPEDGQG--PLASPSLRNSKGWDGKLRLPKKTAVLANPEALSDPEYSDEDNVV 102
Query: 44 -AETTESK-----AEDEESKEV-------------------CIERLLLRWNLIKKIEN-- 76
ET + ED E+ E+ C +RL LR N I+++++
Sbjct: 103 PGETISADEDILDGEDPETDEIFCTHSRVRSIDALHLERFTCCQRLCLRQNSIQRLDSPD 162
Query: 77 -------IHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEK 129
+ LKEL++YDN + + ++TL L LDLSFN+I+ IK L L L
Sbjct: 163 ATPGQGLAALAGCLKELDMYDNLIAHMRGVETLPGLTSLDLSFNKIKHIKHLAGLRELTD 222
Query: 130 LYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLAS 189
L+L +NKI KIE ++ L ++++LELG N+IR I LDGL LEEL+L KNKI+ + L
Sbjct: 223 LFLVANKIGKIEGLETLTRMRMLELGSNRIREIRGLDGLVALEELWLAKNKITDLSGLDG 282
Query: 190 LTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEK------------- 236
L +L +LSLQ NR+ + L ++ L +LYLS N L ++ +L +E
Sbjct: 283 LPRLRLLSLQSNRISDLSPLRVVSTLEELYLSHNLLESVASLSVDETKTSETDGKASDDK 342
Query: 237 ---------LETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQT 286
L TLD+ NKI+ +Q I L +L+E W + N ++D+ V + + L+T
Sbjct: 343 TAATSILPNLRTLDIGNNKITSLQGIGGLHKLEELWASYNLLNDFTDVERNMADKSSLET 402
Query: 287 IYLDRNPVA-QDPN-YRRKIKLVCPWIVQIDAT 317
+Y + NP+ + P YR K++LV P + QIDAT
Sbjct: 403 VYFEGNPLQLRAPALYRNKVRLVLPQVKQIDAT 435
>gi|115445169|ref|NP_001046364.1| Os02g0230100 [Oryza sativa Japonica Group]
gi|49388952|dbj|BAD26172.1| putative sds22+ [Oryza sativa Japonica Group]
gi|113535895|dbj|BAF08278.1| Os02g0230100 [Oryza sativa Japonica Group]
gi|215715315|dbj|BAG95066.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622475|gb|EEE56607.1| hypothetical protein OsJ_05977 [Oryza sativa Japonica Group]
Length = 333
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 159/242 (65%), Gaps = 4/242 (1%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLAN-LEKLYLCSNKIS 138
+ L+EL DN+LT I + L + D+SFN I +KGL +++ L++LY+ N+++
Sbjct: 91 IAGLQELVFRDNKLTTIPDASIFKGLLVFDVSFNEISSLKGLSKVSSTLKELYVSKNEVA 150
Query: 139 KIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSL 198
K+E ++H L++LELG N++R++ENL+ L NL+EL+LG+N+I I NL SL + LSL
Sbjct: 151 KMEELEHFHALQILELGSNRLRVMENLETLANLQELWLGRNRIKTI-NLCSLKAIKKLSL 209
Query: 199 QCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
Q NRL ++ L+ L +LYLS NG+ +E L + + L LDV+ NK++ I+++ L+
Sbjct: 210 QSNRLTSMNGLQECIALEELYLSHNGIQKMEGLSTLQNLRVLDVSSNKLTAIEDVETLSR 269
Query: 259 LQEFWINDNQVSDWNTVN--VLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
L++ W+NDNQ+ + + + + ++L TIYL+RNP A+ PNY +K + P + Q+D+
Sbjct: 270 LEDLWLNDNQIPSLDGIESALASSREKLTTIYLERNPCAKAPNYSSTLKTIFPNLEQLDS 329
Query: 317 TL 318
+
Sbjct: 330 DM 331
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 21/150 (14%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI-- 118
++ L + N + K+E + L+ LEL N+L V+ENL+TL NL+ L L NRI+ I
Sbjct: 139 LKELYVSKNEVAKMEELEHFHALQILELGSNRLRVMENLETLANLQELWLGRNRIKTINL 198
Query: 119 -------------------KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKI 159
GL LE+LYL N I K+E + L+ L+VL++ NK+
Sbjct: 199 CSLKAIKKLSLQSNRLTSMNGLQECIALEELYLSHNGIQKMEGLSTLQNLRVLDVSSNKL 258
Query: 160 RIIENLDGLTNLEELYLGKNKISRIDNLAS 189
IE+++ L+ LE+L+L N+I +D + S
Sbjct: 259 TAIEDVETLSRLEDLWLNDNQIPSLDGIES 288
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 12/140 (8%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N IK I N+ L +K+L L N+LT + L I LE L LS N I++++G
Sbjct: 183 LQELWLGRNRIKTI-NLCSLKAIKKLSLQSNRLTSMNGLQECIALEELYLSHNGIQKMEG 241
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTN--------LE 172
L L NL L + SNK++ IE+V+ L +L+ L L DN+ I +LDG+ + L
Sbjct: 242 LSTLQNLRVLDVSSNKLTAIEDVETLSRLEDLWLNDNQ---IPSLDGIESALASSREKLT 298
Query: 173 ELYLGKNKISRIDNLASLTK 192
+YL +N ++ N +S K
Sbjct: 299 TIYLERNPCAKAPNYSSTLK 318
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ +E L L N I+K+E + L L+ L++ N+LT IE+++TL LE L L+ N+I +
Sbjct: 224 IALEELYLSHNGIQKMEGLSTLQNLRVLDVSSNKLTAIEDVETLSRLEDLWLNDNQIPSL 283
Query: 119 KGLDH-LAN----LEKLYLCSNKISKIEN 142
G++ LA+ L +YL N +K N
Sbjct: 284 DGIESALASSREKLTTIYLERNPCAKAPN 312
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 171 LEELYLGKNKISRID-NLASLTKLNILSLQCNRL-----RTIENLEALTNLTQLYLSENG 224
LEEL L N+++ +D + L L LS + N L + + L +L +N
Sbjct: 44 LEELELTANRLAAVDPRIGRLPGLRKLSFRQNLLDDAAVAPLSTWADIAGLQELVFRDNK 103
Query: 225 LTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE-LQEFWINDNQVSDWNTVNVLENNKQ 283
LTTI + + L DV++N+IS ++ ++ ++ L+E +++ N+V+ + LE+
Sbjct: 104 LTTIPDASIFKGLLVFDVSFNEISSLKGLSKVSSTLKELYVSKNEVAK---MEELEHFHA 160
Query: 284 LQTIYLDRN 292
LQ + L N
Sbjct: 161 LQILELGSN 169
>gi|68072351|ref|XP_678089.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56498443|emb|CAH95765.1| conserved hypothetical protein [Plasmodium berghei]
Length = 652
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/305 (43%), Positives = 191/305 (62%), Gaps = 16/305 (5%)
Query: 24 AVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIERLLLRW--NLIKKIENIHMLT 81
A N G + D + E+ S+ E+ E C + + L+ N I+KIEN+
Sbjct: 344 ATYNVLGEITTFD--ENETIISHQYSRIRKIENIEKCKKLMTLQLISNCIEKIENLENNI 401
Query: 82 TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIE 141
L+ LELY+N + IEN+ LINL++LDLSFN+I+ I+ L+ L NLE+LYL SNKISKIE
Sbjct: 402 ELEHLELYENSIKRIENISMLINLKVLDLSFNKIKVIENLETLVNLEELYLSSNKISKIE 461
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
N+ + KKL++LELG NKIR IEN++ L NLEEL+LGKNKI ++ L L KL LSLQ N
Sbjct: 462 NLKNCKKLRLLELGYNKIRKIENIENLKNLEELWLGKNKIEHLE-LPELPKLKKLSLQHN 520
Query: 202 RL-----RTIENLEALTNLTQLYLSENGLTTIENLLSNEK-LETLDVAYNKISIIQNIAH 255
RL ++I N + +L +LYLS N L I + + K L+ LD+AYN+I I +
Sbjct: 521 RLTKWDEKSINN---VLSLNELYLSYNKLNEINDQIKELKYLKVLDLAYNEIENILICSE 577
Query: 256 LTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD--PNYRRKIKLVCPWIVQ 313
L L+E W+N+N + + + L+NN+ L+T+YL++N + + YR +I + P I Q
Sbjct: 578 LKHLEELWLNNNNIKSLDMIVKLKNNENLKTLYLEKNEIQDNLKDTYRDQIISILPQIQQ 637
Query: 314 IDATL 318
+DA L
Sbjct: 638 LDALL 642
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 29/148 (19%)
Query: 178 KNKISRIDNLASLTKLN----ILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLS 233
K K++ + L +T + I+S Q +R+R IEN+E L L L N + IENL +
Sbjct: 340 KQKMATYNVLGEITTFDENETIISHQYSRIRKIENIEKCKKLMTLQLISNCIEKIENLEN 399
Query: 234 NEKLE----------------------TLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
N +LE LD+++NKI +I+N+ L L+E +++ N++S
Sbjct: 400 NIELEHLELYENSIKRIENISMLINLKVLDLSFNKIKVIENLETLVNLEELYLSSNKISK 459
Query: 272 WNTVNVLENNKQLQTIYLDRNPVAQDPN 299
+ L+N K+L+ + L N + + N
Sbjct: 460 ---IENLKNCKKLRLLELGYNKIRKIEN 484
>gi|298706570|emb|CBJ29529.1| Hypothetical leucine rich repeat protein [Ectocarpus siliculosus]
Length = 434
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 153/254 (60%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+ L+ LI K+E + LT+L L LYDNQ+ + +L L LD+S+N ++ +
Sbjct: 177 MTLQSCLIAKMEGLEGLTSLTRLTLYDNQILSLNIPPSLSGLTYLDMSYNLVKSTAPIAG 236
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L++ ++ N++ IE + L +L+ L+LG N+IR I L+ T LEEL+LGKNKI++
Sbjct: 237 CPLLDEAFVAQNRVRAIEGFEGLTRLRKLDLGANRIRAITGLEACTLLEELWLGKNKITQ 296
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I +++L +L L +Q NRL IE LE LT L +LYLS N + L S L+TLD++
Sbjct: 297 IGGISTLVRLKRLDVQSNRLTAIEGLEGLTELRELYLSHNVIENAHGLESQVNLDTLDLS 356
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRK 303
NKI + HL +L + W++ N +S + +V+ L+ L +YL+ NP+ D YR++
Sbjct: 357 RNKIDSFDGLQHLGQLTDLWMSGNLISTFESVDALKPLGSLTCLYLEHNPLYTDFEYRKR 416
Query: 304 IKLVCPWIVQIDAT 317
+ +V P + QIDAT
Sbjct: 417 LAVVLPTLTQIDAT 430
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V ++RL ++ N + IE + LT L+EL L N + L++ +NL+ LDLS N+I
Sbjct: 304 VRLKRLDVQSNRLTAIEGLEGLTELRELYLSHNVIENAHGLESQVNLDTLDLSRNKIDSF 363
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVL 152
GL HL L L++ N IS E+VD LK L L
Sbjct: 364 DGLQHLGQLTDLWMSGNLISTFESVDALKPLGSL 397
>gi|218190355|gb|EEC72782.1| hypothetical protein OsI_06455 [Oryza sativa Indica Group]
Length = 333
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 158/242 (65%), Gaps = 4/242 (1%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLAN-LEKLYLCSNKIS 138
+ L+EL DN+LT I + L + D+SFN I +KGL +++ L++LY+ N+++
Sbjct: 91 IAGLQELVFRDNKLTTIPDASIFKGLLVFDVSFNEISSLKGLSKVSSTLKELYVSKNEVA 150
Query: 139 KIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSL 198
K+E ++H L++LELG N++R++ENL+ L NL+EL+LG+N+I I NL L + LSL
Sbjct: 151 KMEELEHFHALQILELGSNRLRVMENLETLANLQELWLGRNRIKTI-NLCGLKAIKKLSL 209
Query: 199 QCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
Q NRL ++ L+ L +LYLS NG+ +E L + + L LDV+ NK++ I+++ L+
Sbjct: 210 QSNRLTSMNGLQECIALEELYLSHNGIQKMEGLSTLQNLRVLDVSSNKLTAIEDVETLSR 269
Query: 259 LQEFWINDNQVSDWNTVN--VLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
L++ W+NDNQ+ + + + + ++L TIYL+RNP A+ PNY +K + P + Q+D+
Sbjct: 270 LEDLWLNDNQIPSLDGIESALASSREKLTTIYLERNPCAKAPNYSSTLKTIFPNLEQLDS 329
Query: 317 TL 318
+
Sbjct: 330 DM 331
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 21/150 (14%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI-- 118
++ L + N + K+E + L+ LEL N+L V+ENL+TL NL+ L L NRI+ I
Sbjct: 139 LKELYVSKNEVAKMEELEHFHALQILELGSNRLRVMENLETLANLQELWLGRNRIKTINL 198
Query: 119 -------------------KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKI 159
GL LE+LYL N I K+E + L+ L+VL++ NK+
Sbjct: 199 CGLKAIKKLSLQSNRLTSMNGLQECIALEELYLSHNGIQKMEGLSTLQNLRVLDVSSNKL 258
Query: 160 RIIENLDGLTNLEELYLGKNKISRIDNLAS 189
IE+++ L+ LE+L+L N+I +D + S
Sbjct: 259 TAIEDVETLSRLEDLWLNDNQIPSLDGIES 288
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 12/140 (8%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N IK I N+ L +K+L L N+LT + L I LE L LS N I++++G
Sbjct: 183 LQELWLGRNRIKTI-NLCGLKAIKKLSLQSNRLTSMNGLQECIALEELYLSHNGIQKMEG 241
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTN--------LE 172
L L NL L + SNK++ IE+V+ L +L+ L L DN+ I +LDG+ + L
Sbjct: 242 LSTLQNLRVLDVSSNKLTAIEDVETLSRLEDLWLNDNQ---IPSLDGIESALASSREKLT 298
Query: 173 ELYLGKNKISRIDNLASLTK 192
+YL +N ++ N +S K
Sbjct: 299 TIYLERNPCAKAPNYSSTLK 318
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ +E L L N I+K+E + L L+ L++ N+LT IE+++TL LE L L+ N+I +
Sbjct: 224 IALEELYLSHNGIQKMEGLSTLQNLRVLDVSSNKLTAIEDVETLSRLEDLWLNDNQIPSL 283
Query: 119 KGLDH-LAN----LEKLYLCSNKISKIEN 142
G++ LA+ L +YL N +K N
Sbjct: 284 DGIESALASSREKLTTIYLERNPCAKAPN 312
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 171 LEELYLGKNKISRID-NLASLTKLNILSLQCNRL-----RTIENLEALTNLTQLYLSENG 224
LEEL L N+++ +D + L L LS + N L + + L +L +N
Sbjct: 44 LEELDLTANRLAAVDPRIGRLPGLRKLSFRQNLLDDAAVAPLSTWADIAGLQELVFRDNK 103
Query: 225 LTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE-LQEFWINDNQVSDWNTVNVLENNKQ 283
LTTI + + L DV++N+IS ++ ++ ++ L+E +++ N+V+ + LE+
Sbjct: 104 LTTIPDASIFKGLLVFDVSFNEISSLKGLSKVSSTLKELYVSKNEVAK---MEELEHFHA 160
Query: 284 LQTIYLDRN 292
LQ + L N
Sbjct: 161 LQILELGSN 169
>gi|258549091|ref|XP_002585418.1| leucine-rich repeat protein 8, LRR8 [Plasmodium falciparum 3D7]
gi|254922484|gb|ACT83906.1| leucine-rich repeat protein 8, LRR8 [Plasmodium falciparum 3D7]
Length = 309
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/253 (45%), Positives = 174/253 (68%), Gaps = 6/253 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I+K+EN+ L+ LELY+N + IEN+ LINL++LDLSFN+I+ I+ L+ L NLE
Sbjct: 47 NCIEKLENLENNVQLEHLELYENMIKKIENISMLINLKVLDLSFNKIKIIENLETLVNLE 106
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+LYL SNKISKIEN+ + KKL++LELG NKIR+IEN++ LTNLEEL+LGKNKI +I NL
Sbjct: 107 ELYLSSNKISKIENLQNCKKLRLLELGYNKIRMIENIEHLTNLEELWLGKNKIEQI-NLP 165
Query: 189 SLTKLNILSLQCNRLRTI--ENLEALTNLTQLYLSENGLTTIENLLSNEK-LETLDVAYN 245
L KL LS+Q NRL I ++++ + + +LY+S N + I + + K L+ D++YN
Sbjct: 166 YLPKLKKLSVQHNRLTDICEKSIKNILCVEELYISYNKINHIIDTFKDLKHLKVFDLSYN 225
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD--PNYRRK 303
+I+ I ++L L+E W+N+N + + + L + L+T+YL++N + + NYR+
Sbjct: 226 EINNISICSYLKSLEELWLNNNNIDNLEMIKKLSTIENLKTLYLEKNKIQDNLKENYRKT 285
Query: 304 IKLVCPWIVQIDA 316
I + P + Q+DA
Sbjct: 286 IIHILPQLKQLDA 298
>gi|449443173|ref|XP_004139355.1| PREDICTED: protein phosphatase 1 regulatory subunit pprA-like
[Cucumis sativus]
gi|449487955|ref|XP_004157884.1| PREDICTED: protein phosphatase 1 regulatory subunit pprA-like
[Cucumis sativus]
Length = 333
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 172/264 (65%), Gaps = 9/264 (3%)
Query: 61 IERLLLRWNLI-----KKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+++L LR NLI + + + + L+ L+EL L DNQ+T I + L + D+SFN I
Sbjct: 65 LKKLSLRQNLINNAAVESLSHWNALSGLEELILRDNQMTKIPDASIFKRLLVFDVSFNEI 124
Query: 116 REIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
+ GL ++N L++LY+ N+++K+E +DH +L++LELG N++R++EN++ LTNL+EL
Sbjct: 125 TSLHGLSKVSNTLKELYVSKNEVTKMEELDHFLQLQILELGSNRLRVMENMENLTNLQEL 184
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LG+N+I + NL L L +SLQ NRL ++ E L +LYLS NG++ IE + +
Sbjct: 185 WLGRNRIKAV-NLCGLKCLKKISLQSNRLTSMTGFEDCVALEELYLSHNGISKIEGVSTL 243
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV--NVLENNKQLQTIYLDRN 292
L LDV+ NK++ + ++ +LT L++ W+NDNQ+ T+ +V + ++L TIYL+ N
Sbjct: 244 VNLRILDVSSNKLTSVSDVQNLTCLEDLWLNDNQIESLETIAEDVAGSREKLTTIYLENN 303
Query: 293 PVAQDPNYRRKIKLVCPWIVQIDA 316
P A+ NY ++K + P I QID+
Sbjct: 304 PCAKTSNYCARLKEIFPNIQQIDS 327
>gi|363814364|ref|NP_001242821.1| uncharacterized protein LOC100781548 [Glycine max]
gi|255636570|gb|ACU18623.1| unknown [Glycine max]
Length = 330
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 169/264 (64%), Gaps = 9/264 (3%)
Query: 61 IERLLLRWNLIK-----KIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+++L LR NLI + + + L++L+EL L DNQ I ++ L + D++FN I
Sbjct: 64 LQKLSLRQNLISDAAVLPLSSWNALSSLEELVLRDNQFKNIPDVSVFKKLLVFDVAFNEI 123
Query: 116 REIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
+ GL +++ L++LY+ N+++ IE ++H +L++LELG NK+R++ENL L NL+EL
Sbjct: 124 SSLHGLSRVSDTLKELYVSKNEVAMIEEIEHFHQLQLLELGSNKLRVMENLQSLENLQEL 183
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LG+N+I ++ NL L + +SLQ NRL ++ + L +LYLS NG+ +E L S
Sbjct: 184 WLGRNRI-KVVNLCGLKCIKKISLQSNRLTSMMGFDGCVTLEELYLSHNGIAKMEGLSSL 242
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV--NVLENNKQLQTIYLDRN 292
L LDV+ NKI+++ +I +LT+L++ W+NDNQ++ + V + ++L TIYL+ N
Sbjct: 243 VNLRVLDVSSNKITLVDDIVNLTKLEDLWLNDNQIASLEGIAEAVTGSKEKLTTIYLENN 302
Query: 293 PVAQDPNYRRKIKLVCPWIVQIDA 316
P A+ PNY ++ + P I QID+
Sbjct: 303 PCAKTPNYTGILRKIFPNIQQIDS 326
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
CI+++ L+ N + + TL+EL L N + +E L +L+NL +LD+S N+I +
Sbjct: 200 CIKKISLQSNRLTSMMGFDGCVTLEELYLSHNGIAKMEGLSSLVNLRVLDVSSNKITLVD 259
Query: 120 GLDHLANLEKLYLCSNKISKIENV 143
+ +L LE L+L N+I+ +E +
Sbjct: 260 DIVNLTKLEDLWLNDNQIASLEGI 283
>gi|170592204|ref|XP_001900859.1| Leucine Rich Repeat family protein [Brugia malayi]
gi|158591726|gb|EDP30330.1| Leucine Rich Repeat family protein [Brugia malayi]
Length = 270
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 142/208 (68%), Gaps = 5/208 (2%)
Query: 57 KEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIR 116
KE+C +R NL+ + + +TTL +L+LYDNQ+ VI NLD LINL ILDLS+NRIR
Sbjct: 67 KELC-----MRQNLLVSLNDHLAITTLTQLDLYDNQIEVISNLDALINLVILDLSYNRIR 121
Query: 117 EIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYL 176
+I+GL L NL ++YL NKI KI+ ++ L KL+VLELGDN+I+ +EN+ L L ELY+
Sbjct: 122 KIEGLSALCNLRRIYLVHNKIEKIDGLESLAKLEVLELGDNRIKKLENIGHLQCLRELYI 181
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEK 236
GKNKI + +NL SL KL +LS NRL + + L+ LT+L++S+ G+ ++ L +K
Sbjct: 182 GKNKIQKFENLESLVKLTVLSAPANRLTELSGISMLSELTELHISDQGIESLTELTFQKK 241
Query: 237 LETLDVAYNKISIIQNIAHLTELQEFWI 264
L +D A NKI+ + + HL L++ W+
Sbjct: 242 LAIIDAANNKITKLDGLIHLDHLEDIWV 269
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 88/150 (58%), Gaps = 2/150 (1%)
Query: 122 DHLA--NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
DHLA L +L L N+I I N+D L L +L+L N+IR IE L L NL +YL N
Sbjct: 81 DHLAITTLTQLDLYDNQIEVISNLDALINLVILDLSYNRIRKIEGLSALCNLRRIYLVHN 140
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI +ID L SL KL +L L NR++ +EN+ L L +LY+ +N + ENL S KL
Sbjct: 141 KIEKIDGLESLAKLEVLELGDNRIKKLENIGHLQCLRELYIGKNKIQKFENLESLVKLTV 200
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQV 269
L N+++ + I+ L+EL E I+D +
Sbjct: 201 LSAPANRLTELSGISMLSELTELHISDQGI 230
>gi|300122757|emb|CBK23321.2| unnamed protein product [Blastocystis hominis]
Length = 321
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 157/257 (61%), Gaps = 5/257 (1%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L+LR NLI K++N+ L L+ LELYDN++ I++ L+NL +LDLSFN+I+EI L
Sbjct: 59 LVLRSNLIHKMQNMDTLVNLEVLELYDNKIHEIKHFSHLVNLRVLDLSFNKIKEIPDLSP 118
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L LE+LYL SN I + NV L L++L+LG N IR I + L+ LE+L+LG+NKI
Sbjct: 119 LQRLEELYLASNDIEDMTNVCTLPSLRLLDLGYNSIRHITGVQSLSRLEKLFLGRNKIET 178
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L L +L IL LQ NR+R+ LE L +L +LYL+ NG+ IE + + + TLD+
Sbjct: 179 ISGLQGL-RLRILDLQSNRIRSSRGLETLVDLQELYLAYNGIPKIEGMEALRSVNTLDLT 237
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN-NKQ---LQTIYLDRNPVAQDPN 299
+N ++ Q + L+ W++ N + + + L ++Q L+T+YL+ P+ P
Sbjct: 238 HNYLTDTQGMQGFASLEFLWLSQNPIETFEALETLGALSRQYGVLETVYLEHTPIYDMPE 297
Query: 300 YRRKIKLVCPWIVQIDA 316
YR K + P + Q+D+
Sbjct: 298 YREKCLALLPSVKQLDS 314
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%)
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
K++RID +A LT L L L+ N + ++N++ L NL L L +N + I++ L
Sbjct: 43 KVTRIDGIAHLTNLTSLVLRSNLIHKMQNMDTLVNLEVLELYDNKIHEIKHFSHLVNLRV 102
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIY 288
LD+++NKI I +++ L L+E ++ N + D V L + + L Y
Sbjct: 103 LDLSFNKIKEIPDLSPLQRLEELYLASNDIEDMTNVCTLPSLRLLDLGY 151
>gi|363808372|ref|NP_001242512.1| uncharacterized protein LOC100782492 [Glycine max]
gi|255642039|gb|ACU21286.1| unknown [Glycine max]
Length = 330
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 169/264 (64%), Gaps = 9/264 (3%)
Query: 61 IERLLLRWNLIK-----KIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+++L LR NLI + + + +++L+EL L DNQL I ++ L + D++FN I
Sbjct: 64 LKKLSLRQNLITDAAVLPLSSWNAISSLEELVLRDNQLKNIPDVTVFKKLLVFDVAFNEI 123
Query: 116 REIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
+ GL +++ L++LY+ +N+++KIE ++H +L++LELG NK+R++ENL L NL+EL
Sbjct: 124 SSLHGLSRVSDTLKELYVSNNEVAKIEEIEHFHQLQILELGSNKLRVMENLQSLENLQEL 183
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LG+N+I ++ NL L + +S Q NRL ++ E L +LYLS NG+ +E L S
Sbjct: 184 WLGQNRI-KVVNLCGLKCIKKISFQSNRLTSMTGFEGCVALEELYLSHNGIAKMEGLSSL 242
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV--NVLENNKQLQTIYLDRN 292
L LDV+ NKI+ + +I +LT+L++ W+NDNQ++ + V + ++L TIYL N
Sbjct: 243 VNLRVLDVSSNKITSVDDIVNLTKLEDLWLNDNQIASLEGIAEAVSGSKEKLTTIYLKNN 302
Query: 293 PVAQDPNYRRKIKLVCPWIVQIDA 316
P A+ PNY ++ + P I QID+
Sbjct: 303 PCAKTPNYTGILREIFPNIQQIDS 326
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
CI+++ + N + + L+EL L N + +E L +L+NL +LD+S N+I +
Sbjct: 200 CIKKISFQSNRLTSMTGFEGCVALEELYLSHNGIAKMEGLSSLVNLRVLDVSSNKITSVD 259
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHL-----KKLKVLELGDNKIRIIENLDGLTNLEEL 174
+ +L LE L+L N+I+ +E + +KL + L +N N G+ L E+
Sbjct: 260 DIVNLTKLEDLWLNDNQIASLEGIAEAVSGSKEKLTTIYLKNNPCAKTPNYTGI--LREI 317
Query: 175 Y 175
+
Sbjct: 318 F 318
>gi|389582802|dbj|GAB65539.1| protein phosphatases PP1 regulatory subunit sds22 [Plasmodium
cynomolgi strain B]
Length = 325
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 114/229 (49%), Positives = 159/229 (69%), Gaps = 8/229 (3%)
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELG 155
IEN+ L NL++LDLSFN+IR I+ +D L NLE+LYL SNKI+KIEN+ + KKL++LELG
Sbjct: 82 IENICMLTNLKVLDLSFNKIRIIENIDTLVNLEELYLSSNKIAKIENLQNCKKLRLLELG 141
Query: 156 DNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR--TIENLEALT 213
NKIR IENL+ LTNLEEL+LGKNKI + NL KL LSLQ NRL ++E ++ +
Sbjct: 142 YNKIRRIENLESLTNLEELWLGKNKIEEL-NLPRFPKLKKLSLQHNRLTNWSVEAIKNIP 200
Query: 214 NLTQLYLSENGLTT-IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDW 272
+T+LYLS N L+T IEN+ E L+ D++YN+I I + L L+E W+N+N + D
Sbjct: 201 QITELYLSYNKLSTIIENIKELEHLKVFDLSYNEIRNILICSELKSLEELWLNNNNIGDI 260
Query: 273 NTVNVLENNKQLQTIYLDRNPVAQDP---NYRRKIKLVCPWIVQIDATL 318
+ V L N+ L+T+YL++N + QD +YR +I + P + Q+DA L
Sbjct: 261 DMVKNLSENQNLKTLYLEKNEI-QDKLKEDYRTQIISILPQLKQLDALL 308
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 82/157 (52%), Gaps = 24/157 (15%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIRE- 117
V +E L L N I KIEN+ L+ LEL N++ IENL++L NLE L L N+I E
Sbjct: 111 VNLEELYLSSNKIAKIENLQNCKKLRLLELGYNKIRRIENLESLTNLEELWLGKNKIEEL 170
Query: 118 ----------------------IKGLDHLANLEKLYLCSNKISK-IENVDHLKKLKVLEL 154
++ + ++ + +LYL NK+S IEN+ L+ LKV +L
Sbjct: 171 NLPRFPKLKKLSLQHNRLTNWSVEAIKNIPQITELYLSYNKLSTIIENIKELEHLKVFDL 230
Query: 155 GDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLT 191
N+IR I L +LEEL+L N I ID + +L+
Sbjct: 231 SYNEIRNILICSELKSLEELWLNNNNIGDIDMVKNLS 267
>gi|357140497|ref|XP_003571803.1| PREDICTED: protein phosphatase 1 regulatory subunit pprA-like
[Brachypodium distachyon]
Length = 339
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 166/266 (62%), Gaps = 9/266 (3%)
Query: 61 IERLLLRWNL-----IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+ +L R NL + + + L+EL L DN+LT I + L + D+SFN I
Sbjct: 73 LRKLSFRQNLLDDDAVAPLSTWDAIAGLQELVLRDNKLTKIPDASIFKGLLVFDVSFNEI 132
Query: 116 REIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
+ GL +++ ++++Y+ N+++K+E +DH L++LELG N++R++ENL LTNL+EL
Sbjct: 133 SSLNGLSKVSSTVKEIYVSKNEVAKMEELDHFHALELLELGSNRLRVMENLQTLTNLQEL 192
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LG+N+I I NL L + LSLQ NRL ++ L+ L +LYLS NG+ +E L +
Sbjct: 193 WLGRNRIRTI-NLCGLKSIKKLSLQSNRLTSMNGLQECVALEELYLSHNGIQKMEGLSTL 251
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQ-LQTIYLDRN 292
+ L LDV+ NK+ I++I LT L++ W+NDNQ+ + + + L +++ L TIYL+RN
Sbjct: 252 QNLRVLDVSSNKLIAIEDIETLTRLEDLWLNDNQIPSLDGIESALSGSREKLTTIYLERN 311
Query: 293 PVAQDPNYRRKIKLVCPWIVQIDATL 318
P A+ PNY +K + P + QID+ +
Sbjct: 312 PCAKTPNYSSTLKKMFPNLEQIDSDM 337
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V +E L L N I+K+E + L L+ L++ N+L IE+++TL LE L L+ N+I +
Sbjct: 230 VALEELYLSHNGIQKMEGLSTLQNLRVLDVSSNKLIAIEDIETLTRLEDLWLNDNQIPSL 289
Query: 119 KGLDHL--ANLEKL---YLCSNKISKIENVDH-LKKL 149
G++ + EKL YL N +K N LKK+
Sbjct: 290 DGIESALSGSREKLTTIYLERNPCAKTPNYSSTLKKM 326
>gi|45190710|ref|NP_984964.1| AER104Wp [Ashbya gossypii ATCC 10895]
gi|44983689|gb|AAS52788.1| AER104Wp [Ashbya gossypii ATCC 10895]
gi|374108187|gb|AEY97094.1| FAER104Wp [Ashbya gossypii FDAG1]
Length = 349
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/330 (41%), Positives = 202/330 (61%), Gaps = 20/330 (6%)
Query: 8 NTDEVDNDNLVTLNVEAVENTHG------NQMSLDNPDEESEAETTESKAEDEESKEVC- 60
N D + + L E V + H ++++ D P++ + + K E E+ ++
Sbjct: 16 NASHHDGEPVRELRSEIVPDMHPEYLQADSELTADLPEDTTVIDLVHLKIESLEALDLHR 75
Query: 61 ---IERLLLRWNLIKKIENIHMLT--TLKELELYDNQLTVI-ENLDTLINLEILDLSFNR 114
+ERL LR NLI+ I + +L T++EL+LYDN++ I N++ L+NL+ LDLSFN+
Sbjct: 76 FKKLERLYLRQNLIESISEVEVLPAETVEELDLYDNRIKHISRNVNKLVNLKSLDLSFNK 135
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII--ENLDGLTNLE 172
I+ IK +D L LE++Y NKI+ IEN++ L LK LELG N+I I E+L GL LE
Sbjct: 136 IKNIKNIDKLTKLERVYFVQNKIAVIENLNTLGNLKSLELGGNRIAEIGPESLQGLGGLE 195
Query: 173 ELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLL 232
E++LGKN ISR+ NL L L ILS+Q N+LR IE L+ L NL +LYLS N + IE L
Sbjct: 196 EIWLGKNSISRLANLQYLKNLKILSIQSNKLRNIEGLDELENLEELYLSHNFIEHIEGLE 255
Query: 233 SNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQV--SDWNTVNVLENNKQLQTIYLD 290
N KL TLDV N+++ I+N++ LT L + W + N++ S + L++ K L+TIYL+
Sbjct: 256 KNTKLTTLDVTANRLTRIENVSKLTALTDLWASFNKIDQSFESLAEELKDLKALETIYLE 315
Query: 291 RNPVAQD--PNYRRKIKL-VCPWIVQIDAT 317
NP+ YRRK+ L + P + +IDAT
Sbjct: 316 GNPIQTKNATTYRRKLVLNLGPSLQKIDAT 345
>gi|168039357|ref|XP_001772164.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676495|gb|EDQ62977.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 358
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/265 (40%), Positives = 167/265 (63%), Gaps = 4/265 (1%)
Query: 57 KEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIR 116
+++ E+ LL + + + L LKEL L DN+L I L T + L +LD+SFN++
Sbjct: 92 QKLSFEQNLLADSALTEFNQFTTLKGLKELVLRDNKLLKIPGLSTFVELLLLDVSFNKVS 151
Query: 117 EIKGL-DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
+ GL D ++L +LYL +N+I KI ++HL L+VLELG NKIR++E LD L L++L+
Sbjct: 152 SMNGLSDVSSSLTELYLSNNEIEKIVEMEHLTNLRVLELGSNKIRVMERLDQLKELQQLW 211
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LG+N+I + NL LT L +S+Q NRL ++ + NLT+LYLS N ++ +E L + +
Sbjct: 212 LGRNRIQSV-NLCGLTGLLKISVQNNRLTSMAAFQDCVNLTELYLSHNHISVMEGLSTLQ 270
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNK-QLQTIYLDRNP 293
L LD++ NKI+ I N+ L L++ W+NDN +S + + + L K L TIYL+RNP
Sbjct: 271 NLRVLDLSSNKITEISNLEELIRLEDLWLNDNSISSLDDIEMKLAGCKNSLTTIYLERNP 330
Query: 294 VAQDPNYRRKIKLVCPWIVQIDATL 318
A DP Y R ++ + P + Q+D+ L
Sbjct: 331 CALDPKYMRTMRAILPKLQQLDSHL 355
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 26/174 (14%)
Query: 147 KKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID-NLASLTKLNILSLQCN---- 201
K+ K+L+L ++ + ++D + LEEL L N+++ ID +++L+ L LS + N
Sbjct: 44 KEEKILDLTSFQLHDLTDVDLPSFLEELDLTANRLTSIDPRISNLSHLQKLSFEQNLLAD 103
Query: 202 -RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL-TEL 259
L L L +L L +N L I L + +L LDV++NK+S + ++ + + L
Sbjct: 104 SALTEFNQFTTLKGLKELVLRDNKLLKIPGLSTFVELLLLDVSFNKVSSMNGLSDVSSSL 163
Query: 260 QEFWINDNQVS----------------DWNTVNVLE---NNKQLQTIYLDRNPV 294
E ++++N++ N + V+E K+LQ ++L RN +
Sbjct: 164 TELYLSNNEIEKIVEMEHLTNLRVLELGSNKIRVMERLDQLKELQQLWLGRNRI 217
>gi|452843223|gb|EME45158.1| hypothetical protein DOTSEDRAFT_71009 [Dothistroma septosporum
NZE10]
Length = 374
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 164/261 (62%), Gaps = 4/261 (1%)
Query: 61 IERLLLRWNLIKKIE-NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I+RL LR N I+ IE L ELELYDN + ++ + L LDLS+N+I+ I+
Sbjct: 109 IKRLCLRQNQIQHIELPESTRAQLVELELYDNLIKHVDGVGECTALTQLDLSYNKIKHIR 168
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L +L L+ LY N+ISKIE ++ L +L LELG N+I+ IE L+ LT L+ L+LG+N
Sbjct: 169 HLSNLKKLDHLYFVQNRISKIEGLEELTQLTYLELGANRIKDIEGLETLTQLQSLWLGQN 228
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
KI+ + L++L+ L LS+Q NRL +++ +E+L +T+LY+S+N +T++E L N+KL
Sbjct: 229 KITELKGLSTLSNLRSLSIQANRLTSLDGIESLPQITELYVSDNQITSLEPLRHNKKLVM 288
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVA-QD 297
+D N+IS + + L EL+ W ++ V + V L++ QL+ +Y + NP+ Q+
Sbjct: 289 VDFQSNQISSLSGLEELMELENVWASNCSVESFREVERALKDKSQLEEVYFEGNPLQRQN 348
Query: 298 PN-YRRKIKLVCPWIVQIDAT 317
P YR K++L P I +IDA
Sbjct: 349 PVLYRNKVRLALPQISKIDAA 369
>gi|224142195|ref|XP_002324444.1| predicted protein [Populus trichocarpa]
gi|222865878|gb|EEF03009.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 171/266 (64%), Gaps = 9/266 (3%)
Query: 61 IERLLLRWNLI-----KKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+++L LR NLI + L+ L+EL L DN+L I + NL + D+SFN I
Sbjct: 70 LKKLSLRQNLIDDAAVEPFSRWDSLSALQELVLRDNKLKKIPDSGIFKNLLVFDVSFNEI 129
Query: 116 REIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
+ GL ++N L++LY+ N+++KIE +DHL +L++LELG N++R++E++ T+L+EL
Sbjct: 130 TSLHGLSKVSNTLKELYVSKNEVTKIEEIDHLYQLQILELGSNRLRVMESMQNFTSLQEL 189
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LG+N+I ++ NL L + LSLQ NR+ +++ E L +LYLS NG+ +E L +
Sbjct: 190 WLGRNRI-KVVNLCGLKCIKKLSLQSNRVTSMKGFEECVALEELYLSHNGIAKMEGLSTL 248
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN--VLENNKQLQTIYLDRN 292
L LDV+ NK++ + +I +LT+L++ W+NDNQ+ V+ V+ + ++L TIYL+ N
Sbjct: 249 VNLRVLDVSSNKLTSVNDIQNLTQLEDLWLNDNQIESLEGVSEAVVSSREKLTTIYLENN 308
Query: 293 PVAQDPNYRRKIKLVCPWIVQIDATL 318
P A+ +Y ++ + P I QID+++
Sbjct: 309 PCAKSTSYSAFLRQIFPNIQQIDSSV 334
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
CI++L L+ N + ++ L+EL L N + +E L TL+NL +LD+S N++ +
Sbjct: 206 CIKKLSLQSNRVTSMKGFEECVALEELYLSHNGIAKMEGLSTLVNLRVLDVSSNKLTSVN 265
Query: 120 GLDHLANLEKLYLCSNKISKIENV 143
+ +L LE L+L N+I +E V
Sbjct: 266 DIQNLTQLEDLWLNDNQIESLEGV 289
>gi|219363647|ref|NP_001136450.1| uncharacterized protein LOC100216558 [Zea mays]
gi|194695748|gb|ACF81958.1| unknown [Zea mays]
gi|413926065|gb|AFW65997.1| hypothetical protein ZEAMMB73_087922 [Zea mays]
Length = 352
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 163/264 (61%), Gaps = 9/264 (3%)
Query: 61 IERLLLRWNL-----IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+ +L R NL + + + + LKE + DN+LT I + +L + D+SFN I
Sbjct: 86 LRKLSFRQNLLDDDAVAPLTSWEAIAGLKEFVIRDNKLTRIPDAGIFKDLLVFDVSFNEI 145
Query: 116 REIKGLDHLA-NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
+ GL ++ L++LY+ N+++K+E ++H L++LELG N++R++ENL+ LTNL+EL
Sbjct: 146 SSLTGLSKVSIKLKELYVSKNEVAKMEELEHFHALEILELGSNRLRVMENLETLTNLQEL 205
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LG+N+I R NL L + +SLQ NRL ++ + L +LYLS NG+ +E L +
Sbjct: 206 WLGRNRI-RAVNLCGLKLIKKISLQSNRLTSMHGFQECAALEELYLSHNGIQKMEGLSTL 264
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN--VLENNKQLQTIYLDRN 292
L LDV+ NK++ I+NI LT L++ W+NDNQ+ + + + ++L TIYL+RN
Sbjct: 265 HNLRILDVSANKLTTIENIETLTRLEDLWLNDNQIPSLEGIETALAGSREKLTTIYLERN 324
Query: 293 PVAQDPNYRRKIKLVCPWIVQIDA 316
P A+ P+Y ++ + P + QID+
Sbjct: 325 PCAKTPDYSSTLRKIFPNLEQIDS 348
>gi|410082788|ref|XP_003958972.1| hypothetical protein KAFR_0I00560 [Kazachstania africana CBS 2517]
gi|372465562|emb|CCF59837.1| hypothetical protein KAFR_0I00560 [Kazachstania africana CBS 2517]
Length = 341
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/272 (47%), Positives = 176/272 (64%), Gaps = 16/272 (5%)
Query: 61 IERLLLRWNLIKKIENIHMLT--TLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIRE 117
+ +L LR NLI+ I + +L T+ +++ YDN++T I NL+ LINL LDLSFN I+
Sbjct: 71 LSQLCLRQNLIESIGEVEVLPVETMTDIDFYDNRITHISRNLNKLINLVNLDLSFNNIKH 130
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE--NLDGLTNLEELY 175
IK +D L LE LY NKISK+EN+ L LK LELG NKI+ IE + GL+ LEE++
Sbjct: 131 IKNIDQLTKLENLYFVQNKISKVENLSTLTNLKSLELGGNKIQEIEPDSFQGLSKLEEIW 190
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LGKN I R+ +L L L ILS+Q N+L+ IENLE L NL +LYLS N +T IENL N
Sbjct: 191 LGKNAIPRLIHLNHLKSLKILSIQGNKLKKIENLEELENLEELYLSNNFITKIENLDKNL 250
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQV-----SDWNTVNVLENNKQLQTIYLD 290
KL TLD+ NKI+ ++N+ HLT L + W + N++ S + L N L+TIYL+
Sbjct: 251 KLNTLDITSNKITKLENLKHLTNLTDIWASFNKIDQSFESIGEEIGHLPN---LETIYLE 307
Query: 291 RNPVA--QDPNYRRKIKL-VCPWIVQIDATLA 319
NP+ + +YRRK+ L + P + +IDATL
Sbjct: 308 GNPIQLNNETSYRRKLILNLGPSLEKIDATLT 339
>gi|440793429|gb|ELR14613.1| protein phosphatase 1, regulatory subunit 7, putative [Acanthamoeba
castellanii str. Neff]
Length = 314
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/269 (44%), Positives = 162/269 (60%), Gaps = 34/269 (12%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+E+L++R N + KIEN+ LT+L+EL+LYDNQ+T +ENL +L +L LD+SFN R I+
Sbjct: 65 ALEKLVVRNNQLHKIENLEALTSLRELDLYDNQITALENL-SLPSLTYLDISFNVFRRIQ 123
Query: 120 GLDH--LANLEKLYLCSNKISKIE-NVDH--------LKKLKVLELGDNKIRIIENLDGL 168
L H L +L +LYL + KISKIE N H L L LELG N+IR IE LD L
Sbjct: 124 NLTHEGLPHLTELYLIAAKISKIEGNFCHDLLCGLDTLTTLTTLELGSNRIRTIEGLDRL 183
Query: 169 TNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTI 228
NLE L+LGKNKI+RI L LT L LS+Q NRL I L+ L L +LYLS NG+ I
Sbjct: 184 VNLENLWLGKNKITRIQGLDQLTNLRKLSIQSNRLTEITGLDNLRLLEELYLSHNGIDRI 243
Query: 229 ENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIY 288
L + L+TLD++ N+I+ ++N+ HLT L+E W T+Y
Sbjct: 244 AGLDNLVSLKTLDLSANRIAHLENLEHLTSLEELW----------------------TVY 281
Query: 289 LDRNPVAQDPNYRRKIKLVCPWIVQIDAT 317
L NPVA+ P Y+ ++ P + Q+D+
Sbjct: 282 LHGNPVAKHPQYQEQVVAALPSLAQLDSA 310
>gi|341895621|gb|EGT51556.1| hypothetical protein CAEBREN_03649 [Caenorhabditis brenneri]
Length = 335
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 160/257 (62%), Gaps = 1/257 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IE L LRWNL+KKIE++ LT L L L DNQ+ +ENL+TL NLE LD+S+NRI +I+G
Sbjct: 51 IENLSLRWNLVKKIEHLQCLTALTHLNLNDNQIEKLENLETLTNLEFLDVSYNRISKIEG 110
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L + L++L+L NKI+ IE ++ L+ LELGDN+IR I+NL L +L+ L+LG N+
Sbjct: 111 LSEMKKLKELHLVHNKITVIEGLEENTSLEYLELGDNRIRKIDNLSHLCHLKRLFLGANQ 170
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I +I+NL +T+L +SL N L+ IE L+ L+ L L L++NG+ I+ L L+TL
Sbjct: 171 IRKIENLDGMTELIEISLPGNALQVIEGLDTLSGLRALSLAQNGIRKIDGLAGLTSLKTL 230
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV-AQDPN 299
D+ N I ++N+ + I N+ W + L + + L + ++ NP+ + D
Sbjct: 231 DLNDNIIEKLENVDQFKGITNLMIRKNKFDSWQDLYQLRDIENLVALTMEMNPIYSSDYT 290
Query: 300 YRRKIKLVCPWIVQIDA 316
YR ++K + P I +D
Sbjct: 291 YRNRMKQILPQIKLLDG 307
>gi|357520899|ref|XP_003630738.1| Protein phosphatase 1 regulatory subunit [Medicago truncatula]
gi|355524760|gb|AET05214.1| Protein phosphatase 1 regulatory subunit [Medicago truncatula]
Length = 329
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 166/264 (62%), Gaps = 9/264 (3%)
Query: 61 IERLLLRWNLIK-----KIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
++ L LR NLI + + + L++L+EL L DNQL I ++ L + D+SFN I
Sbjct: 63 LKNLSLRQNLITDAAVVPLSSWNTLSSLEELVLRDNQLKNIPDVSIFKKLLVFDVSFNEI 122
Query: 116 REIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
+ G+ + N L++LY+ N+++KIE ++H +L++LELG NK+R++ENL L NL+EL
Sbjct: 123 ASLHGVSRVCNTLKELYVSKNEVTKIEEIEHFHQLQILELGSNKLRVMENLQTLVNLQEL 182
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LG+N+I ++ NL L + +SLQ NRL ++ E L +LYLS NG+T +E L S
Sbjct: 183 WLGRNRI-KVVNLCGLKCIKKISLQSNRLTSMIGFEGCIALEELYLSHNGITKMEGLSSL 241
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV--NVLENNKQLQTIYLDRN 292
L LDV+ NK++ + +I +LT+L++ W+NDNQ+ V + ++L TIYL+ N
Sbjct: 242 ANLRVLDVSSNKLTSVDDIHNLTQLEDLWLNDNQIESLEGFAEAVAGSREKLTTIYLENN 301
Query: 293 PVAQDPNYRRKIKLVCPWIVQIDA 316
A+ PNY ++ V P I QID+
Sbjct: 302 LCAKSPNYTAILREVFPNIQQIDS 325
>gi|366998864|ref|XP_003684168.1| hypothetical protein TPHA_0B00620 [Tetrapisispora phaffii CBS 4417]
gi|357522464|emb|CCE61734.1| hypothetical protein TPHA_0B00620 [Tetrapisispora phaffii CBS 4417]
Length = 346
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 126/267 (47%), Positives = 179/267 (67%), Gaps = 10/267 (3%)
Query: 61 IERLLLRWNLIKKIENIHMLT--TLKELELYDNQLTVIE-NLDTLINLEILDLSFNRIRE 117
+E+L LR NLI+ I + +L + +L+ YDN++ I NL+ L NLE LDLSFN I+
Sbjct: 76 LEQLCLRQNLIENISEVDVLPYDAMVDLDFYDNRIKHISSNLNKLTNLENLDLSFNLIKR 135
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE--NLDGLTNLEELY 175
IK +D L L+ LYL NKISKIEN+ L +L+ LELG N+I+ IE + GL+ L+E++
Sbjct: 136 IKNIDKLVKLKNLYLVQNKISKIENLSTLTELENLELGGNEIKEIEEDSFVGLSKLKEIW 195
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LGKN I R+ NL L L ILS+Q N+L+ IE LE L NL +LY++ N ++ IE L +N+
Sbjct: 196 LGKNSIPRLINLHHLKSLKILSIQGNKLKKIEGLEELENLEELYVANNFISKIEGLENNK 255
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQV--SDWNTVNVLENNKQLQTIYLDRNP 293
KL TLD+ NKI+ I N++HLTEL + W + N++ S + L+N KQL TIYL+ NP
Sbjct: 256 KLTTLDITSNKITEISNLSHLTELTDLWASFNKIDQSFESLGEELKNCKQLDTIYLEGNP 315
Query: 294 VA--QDPNYRRKIKL-VCPWIVQIDAT 317
+ + +YRRK+ L + P + +IDAT
Sbjct: 316 IQLRNETSYRRKLVLNLGPSLQKIDAT 342
>gi|50306439|ref|XP_453193.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642327|emb|CAH00289.1| KLLA0D02816p [Kluyveromyces lactis]
Length = 362
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 122/267 (45%), Positives = 178/267 (66%), Gaps = 10/267 (3%)
Query: 61 IERLLLRWNLIKKIENIHMLT--TLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIRE 117
+++L LR NLI+ I + +L ++E++ YDN++ I ++++ NL+ LDLSFN+IR
Sbjct: 92 LKKLYLRQNLIESIAELEVLPLENMEEIDFYDNRIKHISKSVNLFSNLKTLDLSFNKIRT 151
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII--ENLDGLTNLEELY 175
IK +D L NLE LY NKISKIEN+ L KLK LELG N+I+ I ++L GL NLEE++
Sbjct: 152 IKNVDKLVNLENLYFVQNKISKIENLGTLTKLKNLELGGNRIKEIGPDDLKGLANLEEIW 211
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LGKN I ++ NL L L ILS+Q N+L+ E LE L NL +LY+S N ++ IE L +N
Sbjct: 212 LGKNSIPKLINLQHLKNLRILSIQSNKLKKFEGLEELENLEELYVSHNFISKIEGLENNL 271
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQV-SDWNTVN-VLENNKQLQTIYLDRNP 293
KL TLDV N+++ I+N+ HLT L + W +DNQ+ + ++ L + +TIYL+ NP
Sbjct: 272 KLTTLDVTGNRLTKIENLKHLTHLTDLWASDNQIDQPFESLGEELGKLPEFETIYLEGNP 331
Query: 294 V-AQDP-NYRRKIKL-VCPWIVQIDAT 317
+ ++P YRRKI L + + +IDAT
Sbjct: 332 IQTKNPTQYRRKIMLNLGESLQKIDAT 358
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 33/149 (22%)
Query: 149 LKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL------------------ 190
LKVL L D NL NL++LYL +N I I L L
Sbjct: 76 LKVLALED------LNLLRFKNLKKLYLRQNLIESIAELEVLPLENMEEIDFYDNRIKHI 129
Query: 191 -------TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ L L L N++RTI+N++ L NL LY +N ++ IENL + KL+ L++
Sbjct: 130 SKSVNLFSNLKTLDLSFNKIRTIKNVDKLVNLENLYFVQNKISKIENLGTLTKLKNLELG 189
Query: 244 YNKISIIQ--NIAHLTELQEFWINDNQVS 270
N+I I ++ L L+E W+ N +
Sbjct: 190 GNRIKEIGPDDLKGLANLEEIWLGKNSIP 218
>gi|224114507|ref|XP_002332347.1| predicted protein [Populus trichocarpa]
gi|222832068|gb|EEE70545.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 165/262 (62%), Gaps = 9/262 (3%)
Query: 63 RLLLRWNLI--KKIENIHM---LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIRE 117
+L LR NLI IE ++ L+EL L DN+L I + +L + D+SFN I
Sbjct: 73 KLSLRQNLIDDAAIEPFSRWDSISGLQELVLRDNKLKKIPDTGIFKSLLVFDVSFNEITS 132
Query: 118 IKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYL 176
+ GL +N L++LY+ N+++KIE +DHL +L++LELG N++R++EN+ T+L+EL++
Sbjct: 133 LHGLSKASNTLKELYVSKNEVTKIEEIDHLYQLQILELGSNRLRVMENMGNFTSLQELWM 192
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEK 236
G+N+I ++ NL L + LSLQ NRL +++ E L +LYLS NG+ +E L +
Sbjct: 193 GRNRI-KVVNLCGLKCIKKLSLQSNRLTSMKGFEECVALEELYLSHNGIAKMEGLSTLAN 251
Query: 237 LETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV--NVLENNKQLQTIYLDRNPV 294
L LDV+ NK++ + +I +LT+L++ W+NDNQ+ V V+ + ++L TIYL+ NP
Sbjct: 252 LHVLDVSSNKLTSVDDIQNLTQLEDLWLNDNQIESLKGVAEAVISSREKLTTIYLENNPC 311
Query: 295 AQDPNYRRKIKLVCPWIVQIDA 316
A+ NY ++ P I QID+
Sbjct: 312 AKSTNYTAFLREFFPNIEQIDS 333
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 21/149 (14%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLE-------------- 106
++ L + N + KIE I L L+ LEL N+L V+EN+ +L+
Sbjct: 143 LKELYVSKNEVTKIEEIDHLYQLQILELGSNRLRVMENMGNFTSLQELWMGRNRIKVVNL 202
Query: 107 -------ILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKI 159
L L NR+ +KG + LE+LYL N I+K+E + L L VL++ NK+
Sbjct: 203 CGLKCIKKLSLQSNRLTSMKGFEECVALEELYLSHNGIAKMEGLSTLANLHVLDVSSNKL 262
Query: 160 RIIENLDGLTNLEELYLGKNKISRIDNLA 188
++++ LT LE+L+L N+I + +A
Sbjct: 263 TSVDDIQNLTQLEDLWLNDNQIESLKGVA 291
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
CI++L L+ N + ++ L+EL L N + +E L TL NL +LD+S N++ +
Sbjct: 207 CIKKLSLQSNRLTSMKGFEECVALEELYLSHNGIAKMEGLSTLANLHVLDVSSNKLTSVD 266
Query: 120 GLDHLANLEKLYLCSNKISKIENV 143
+ +L LE L+L N+I ++ V
Sbjct: 267 DIQNLTQLEDLWLNDNQIESLKGV 290
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V +E L L N I K+E + L L L++ N+LT ++++ L LE L L+ N+I +
Sbjct: 228 VALEELYLSHNGIAKMEGLSTLANLHVLDVSSNKLTSVDDIQNLTQLEDLWLNDNQIESL 287
Query: 119 KGLDH--LANLEKL---YLCSNKISKIEN 142
KG+ +++ EKL YL +N +K N
Sbjct: 288 KGVAEAVISSREKLTTIYLENNPCAKSTN 316
>gi|171695322|ref|XP_001912585.1| hypothetical protein [Podospora anserina S mat+]
gi|170947903|emb|CAP60067.1| unnamed protein product [Podospora anserina S mat+]
Length = 394
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/261 (42%), Positives = 171/261 (65%), Gaps = 5/261 (1%)
Query: 63 RLLLRWNLIKKIENIH-MLTTLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIREIKG 120
R+ LR NLI+ IE + + +TL+EL+LYDN ++ I L+ L NL LDLSFN+I+ IK
Sbjct: 130 RICLRQNLIQDIEGLSGIASTLQELDLYDNLISHIGRGLEDLTNLTSLDLSFNKIKHIKH 189
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ HL NL ++ SNKISKI+ +++L KL+ LELG N+IR I N+ LT LEEL++ KNK
Sbjct: 190 ISHLTNLTDIFFVSNKISKIDGLENLTKLRNLELGSNRIREITNISHLTALEELWVAKNK 249
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ ++ L+ L+ L +LS+Q NR+R + L+ + L +LY+S N L ++ + +N L L
Sbjct: 250 ITTLNGLSGLSSLRLLSIQSNRIRDLSPLKEVPQLEELYISHNALESLAGIENNTALRIL 309
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QDP 298
+++ N+I ++ + L L+E W + NQ+ D N V L + K+L T+Y + NP+ + P
Sbjct: 310 EISNNQIKSLKGLGPLKNLEELWASYNQIGDINEVEKELGDKKELTTVYFEGNPLQLRGP 369
Query: 299 N-YRRKIKLVCPWIVQIDATL 318
YR K++L P + QIDAT
Sbjct: 370 AVYRNKVRLALPQVRQIDATF 390
>gi|254579092|ref|XP_002495532.1| ZYRO0B13574p [Zygosaccharomyces rouxii]
gi|238938422|emb|CAR26599.1| ZYRO0B13574p [Zygosaccharomyces rouxii]
Length = 339
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 131/319 (41%), Positives = 197/319 (61%), Gaps = 20/319 (6%)
Query: 19 TLNVEAVENTHGNQMSLDN------PDEESEAETTESKAEDEESKEVC----IERLLLRW 68
+L +E + +TH + D+ PD+ + K E E ++ + +L LR
Sbjct: 17 SLPMEVIPDTHEEYIGADSELTDDLPDDTEVIDLVHLKIEAMEDLKLYRFKKLVQLCLRQ 76
Query: 69 NLIKKIENIHMLT--TLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIREIKGLDHLA 125
NLI+ I + L T+++L+ YDN++ I +N++ +NLE LDLSFN+I+ IK LD+L
Sbjct: 77 NLIESISEVDSLPVETIRDLDFYDNRIKHISKNINKFVNLENLDLSFNKIKHIKNLDNLV 136
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE--NLDGLTNLEELYLGKNKISR 183
NL+ LY NKISKIEN+ LK LK LELG N+IR IE + GL NL+E++LGKN I +
Sbjct: 137 NLQNLYFVQNKISKIENLSTLKNLKNLELGGNEIREIEPDSFKGLENLQEIWLGKNSIPK 196
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ NL L L +LS+Q NRL+ IE LE L NL +LYLS N LT IE L +N+KL +D+
Sbjct: 197 LINLHHLKNLRVLSIQSNRLKKIEGLEGLENLEELYLSHNYLTKIEGLENNKKLTIIDIT 256
Query: 244 YNKISIIQNIAHLTELQEFWINDNQV-SDWNTVN-VLENNKQLQTIYLDRNPV--AQDPN 299
N I+ ++N+ HL L +FW + N++ + ++ L +L T+YL+ NP+ + +
Sbjct: 257 SNAITKVENMKHLVHLTDFWASFNKIDQSFESIGEELGKLPELDTVYLEGNPIQLKNETS 316
Query: 300 YRRKIKL-VCPWIVQIDAT 317
YRRK+ + + P + +IDAT
Sbjct: 317 YRRKLVMNLGPSLQKIDAT 335
>gi|164660302|ref|XP_001731274.1| hypothetical protein MGL_1457 [Malassezia globosa CBS 7966]
gi|159105174|gb|EDP44060.1| hypothetical protein MGL_1457 [Malassezia globosa CBS 7966]
Length = 327
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 136/208 (65%), Gaps = 6/208 (2%)
Query: 63 RLLLRWNLIKKI--ENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
RL LR N I+ + +++ + LKEL+LYDN + I L+ + LE+LDLSFN IR +
Sbjct: 102 RLGLRQNEIRSMHGKDLGAVPHLKELDLYDNAIEQISGLENNLELEVLDLSFNNIRHVSR 161
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKK----LKVLELGDNKIRIIENLDGLTNLEELYL 176
+ HL L+L NKI+ I D L+ LELG N++R +ENL LTNLEEL++
Sbjct: 162 IAHLPKCHTLFLVQNKIAHIRPTDLQPPISLSLRSLELGGNRLRSLENLSQLTNLEELWV 221
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEK 236
GKNKI+ +D +ASL KL ILS+Q NRL +E L++L L +LYLS NGLT +ENL N +
Sbjct: 222 GKNKITSLDGIASLKKLKILSIQSNRLTKLEGLDSLEALEELYLSHNGLTKLENLEHNVR 281
Query: 237 LETLDVAYNKISIIQNIAHLTELQEFWI 264
L TLD N+I +I+N+ HL L +FW+
Sbjct: 282 LTTLDFGANQIEVIENVKHLKNLSQFWV 309
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 77/118 (65%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ + L L N ++ +EN+ LT L+EL + N++T ++ + +L L+IL + NR+ ++
Sbjct: 192 LSLRSLELGGNRLRSLENLSQLTNLEELWVGKNKITSLDGIASLKKLKILSIQSNRLTKL 251
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYL 176
+GLD L LE+LYL N ++K+EN++H +L L+ G N+I +IEN+ L NL + ++
Sbjct: 252 EGLDSLEALEELYLSHNGLTKLENLEHNVRLTTLDFGANQIEVIENVKHLKNLSQFWV 309
>gi|430813946|emb|CCJ28754.1| unnamed protein product [Pneumocystis jirovecii]
Length = 326
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/259 (44%), Positives = 161/259 (62%), Gaps = 5/259 (1%)
Query: 64 LLLRWNLIKKIENIHMLT-TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLD 122
L LR N +++ L L+EL+LYDN +T I T L LDLSFN I+ I+ L+
Sbjct: 64 LCLRQNQLEEFPEPRTLPRGLEELDLYDNNITEIPEYTTFGELHTLDLSFNCIKHIRNLE 123
Query: 123 HLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKIS 182
L+ LY NKIS+I ++ L+ L LELG N+IR+ + + EL+LGKNKI+
Sbjct: 124 RCKKLKNLYFVQNKISQITGLEELEGLVNLELGANRIRVGVVRHDMARINELWLGKNKIT 183
Query: 183 RIDNLASLTKLNILSLQCNRLRTIENLEALTN-LTQLYLSENGLTTIENLLSNEKLETLD 241
++ L +L L ILSLQ NRL +I LEAL N L +LYLS NG+T+IE L +L LD
Sbjct: 184 KLKGLETLQNLRILSLQSNRLTSISGLEALANVLEELYLSHNGITSIEGLRMLRRLRVLD 243
Query: 242 VAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVAQ--DP 298
++ NKI +++I +LQE W + NQ+SD+ + ++ K+L TIYL+ NP+ + +
Sbjct: 244 ISNNKIENLEHINQNEDLQELWASYNQLSDFGNIEKECKSMKRLVTIYLEGNPLQKMNES 303
Query: 299 NYRRKIKLVCPWIVQIDAT 317
YR KI+L+ PWI QIDAT
Sbjct: 304 TYRNKIRLILPWIKQIDAT 322
>gi|221054199|ref|XP_002261847.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
knowlesi strain H]
gi|193808307|emb|CAQ39010.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
knowlesi strain H]
Length = 317
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/276 (43%), Positives = 173/276 (62%), Gaps = 30/276 (10%)
Query: 71 IKKIENIHMLTTLKELELYDN----------------------QLTVIENLDTLINLEIL 108
I+KIENI LK L+L N + IEN+ L NL++L
Sbjct: 27 IRKIENIEKCKNLKTLQLISNCIEKIENLENNLELENLELYENSIKKIENIFMLTNLKVL 86
Query: 109 DLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGL 168
DLSFN+IR I+ +D L NLE+LYL SNKI+KIEN+ + KKL++LELG N+IR IENL+ L
Sbjct: 87 DLSFNKIRIIENIDTLVNLEELYLSSNKIAKIENLQNCKKLRLLELGYNRIRKIENLESL 146
Query: 169 TNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR--TIENLEALTNLTQLYLSENGLT 226
NLEEL+LGKNKI + NL S KL LSLQ NRL ++E ++ + +T+LYLS N L+
Sbjct: 147 INLEELWLGKNKIEEL-NLPSFPKLKKLSLQHNRLTNWSVEVIKNIPQVTELYLSYNKLS 205
Query: 227 TI-ENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQ 285
TI EN+ + L+ D++YN+I I + L L+E W+N+N++ + + L N+ L+
Sbjct: 206 TIVENIRELKHLKVFDLSYNEIENILICSELKSLEELWLNNNKIDNIEMIKNLRENENLK 265
Query: 286 TIYLDRNPVAQDP---NYRRKIKLVCPWIVQIDATL 318
T+YL++N + QD +YR +I + P + Q+DA L
Sbjct: 266 TLYLEKNGI-QDKLKGDYRTEIISILPQLKQLDALL 300
>gi|403224112|dbj|BAM42242.1| protein phosphatase regulator subunit [Theileria orientalis strain
Shintoku]
Length = 330
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/293 (40%), Positives = 184/293 (62%), Gaps = 10/293 (3%)
Query: 26 ENTHGNQMSLDNPDEE--SEAETTESKAEDEESKEVC--IERLLLRWNLIKKIENIHMLT 81
+N H ++ +D P +E + E S+ + E+ + C +++L L NLI+KIE++
Sbjct: 5 QNVHIQRIGIDLPVDENATSVEFHLSRVKYIENLDKCGKLKKLSLVSNLIQKIEHLEHNN 64
Query: 82 TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIE 141
+L+ L+LY N++ VIENL+ L NL++LDLSFN I +I+ L+ L NLE+LYL +NKIS++
Sbjct: 65 SLEHLDLYQNKIQVIENLENLTNLKVLDLSFNEIVKIENLESLVNLEELYLSNNKISEVT 124
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
N+ HL+ L +LELG NKI+ +++ L L L+LGKNK++ + +L L L S+Q N
Sbjct: 125 NLSHLRNLTLLELGSNKIKAYGDVERLRTLTALWLGKNKLTTM-SLPDLPNLERCSIQNN 183
Query: 202 RLRTIEN--LEALTNLTQLYLSENGLTTIENLL-SNEKLETLDVAYNKISIIQNIAHLTE 258
R++ + ++ L LT+ YLS N LT I + + S L LD+ NKIS I ++A +
Sbjct: 184 RVKEWDECVVKNLPKLTEFYLSYNKLTEIPSFITSMSNLVILDLGNNKISKIHHLAENST 243
Query: 259 LQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ--DPNYRRKIKLVCP 309
L+E W+NDN + D + V VL K L +YL+RNP+ P+YR +I + P
Sbjct: 244 LEELWLNDNDIEDESDVRVLTALKGLNVLYLERNPIQYKLGPSYRNRILDILP 296
>gi|367017412|ref|XP_003683204.1| hypothetical protein TDEL_0H01340 [Torulaspora delbrueckii]
gi|359750868|emb|CCE93993.1| hypothetical protein TDEL_0H01340 [Torulaspora delbrueckii]
Length = 339
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 134/336 (39%), Positives = 197/336 (58%), Gaps = 32/336 (9%)
Query: 16 NLVTLNVEAVENTHGN--QMSLDNPDEE---SEAETTESKAEDEESKEVC---------- 60
N+ + VE + +G+ +D+P+ + +++E TE +D ES ++
Sbjct: 2 NVASTPVEGKKRGNGSLEVQQVDDPNVDYITADSELTEDLPDDAESIDLIHLKIQSLEDL 61
Query: 61 -------IERLLLRWNLIKKIENIHMLT--TLKELELYDNQLTVIE-NLDTLINLEILDL 110
+ L LR NLI+ I + +L T K+L+LYDN++ I N+ L+NLE LDL
Sbjct: 62 KLYRFTRLASLCLRQNLIESISEVEVLPVDTFKDLDLYDNRIKHISSNISKLVNLENLDL 121
Query: 111 SFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII--ENLDGL 168
SFN+I+ IK ++ L NL+ LY NKIS IEN+ LKKL LELG N+I I ++ GL
Sbjct: 122 SFNKIKHIKNVEQLINLKNLYFVQNKISVIENLSTLKKLVNLELGGNRIDEILPDSFIGL 181
Query: 169 TNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTI 228
NLEEL+LGKN I + +L L L ILS+Q NRL IE LE L NL +LY+S N +T I
Sbjct: 182 ENLEELWLGKNSIRTLVHLNPLKSLKILSIQANRLTKIEGLEELENLEELYISHNFVTKI 241
Query: 229 ENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDW--NTVNVLENNKQLQT 286
+ L +N KL TLDV NKI+ ++N++HL L + W + NQ+ + L +T
Sbjct: 242 DGLSNNHKLTTLDVTSNKITKVENLSHLKNLTDLWASFNQIDQTFEEVGDELRGLPAFET 301
Query: 287 IYLDRNPVAQ--DPNYRRKIKL-VCPWIVQIDATLA 319
IYL+ NP+ + + +YRRK+ + + P + +IDAT
Sbjct: 302 IYLEGNPIQRNNETSYRRKLVMNLGPSLQKIDATFV 337
>gi|147788249|emb|CAN64835.1| hypothetical protein VITISV_020599 [Vitis vinifera]
Length = 324
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 161/252 (63%), Gaps = 5/252 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLAN-LEK 129
+ I ++ L+EL L DN+LT I ++ L + D+SFN I + GL ++N L++
Sbjct: 72 VDMISGWDAISGLEELVLRDNKLTKIPDVSIFKKLLVFDVSFNEISSLNGLAKVSNTLKE 131
Query: 130 LYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLAS 189
LY+ N+++ +E +DH +L++LELG N++R++ENL LT L+EL+LG+N+I R+ NL
Sbjct: 132 LYVSKNEVTTMEEIDHFHELQILELGSNRLRVMENLQTLTKLKELWLGRNRI-RVVNLCG 190
Query: 190 LTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISI 249
L + +SLQ NRL +++ E L +LYLS NG+ +E L + L LD + NK++
Sbjct: 191 LKCIEKISLQSNRLTSMKGFEDCVALEELYLSHNGIAKMEGLSTLVNLRVLDASSNKLTA 250
Query: 250 IQNIAHLTELQEFWINDNQVSDWNTV--NVLENNKQLQTIYLDRNPVAQD-PNYRRKIKL 306
+ +I +LT+L++ W+NDNQ++ + V + ++L TIYL+ NP A++ PNY +K
Sbjct: 251 VDDIXNLTQLEDLWLNDNQITSLEGIAEAVAGSREKLTTIYLENNPCAKNSPNYSATLKQ 310
Query: 307 VCPWIVQIDATL 318
+ P + QID+ +
Sbjct: 311 IFPNLQQIDSAV 322
>gi|225445122|ref|XP_002283839.1| PREDICTED: protein phosphatase 1 regulatory subunit pprA [Vitis
vinifera]
gi|297738769|emb|CBI28014.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 161/252 (63%), Gaps = 5/252 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLAN-LEK 129
+ I ++ L+EL L DN+LT I ++ L + D+SFN I + GL ++N L++
Sbjct: 81 VDMISGWDAISGLEELVLRDNKLTKIPDVSIFKKLLVFDVSFNEISSLNGLAKVSNTLKE 140
Query: 130 LYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLAS 189
LY+ N+++ +E +DH +L++LELG N++R++ENL LT L+EL+LG+N+I R+ NL
Sbjct: 141 LYVSKNEVTTMEEIDHFHELQILELGSNRLRVMENLQTLTKLKELWLGRNRI-RVVNLCG 199
Query: 190 LTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISI 249
L + +SLQ NRL +++ E L +LYLS NG+ +E L + L LD + NK++
Sbjct: 200 LKCIEKISLQSNRLTSMKGFEDCVALEELYLSHNGIAKMEGLSTLVNLRVLDASSNKLTA 259
Query: 250 IQNIAHLTELQEFWINDNQVSDWNTV--NVLENNKQLQTIYLDRNPVAQD-PNYRRKIKL 306
+ +I +LT+L++ W+NDNQ++ + V + ++L TIYL+ NP A++ PNY +K
Sbjct: 260 VDDIENLTQLEDLWLNDNQITSLEGIAEAVAGSREKLTTIYLENNPCAKNSPNYSATLKQ 319
Query: 307 VCPWIVQIDATL 318
+ P + QID+ +
Sbjct: 320 IFPNLQQIDSAV 331
>gi|320582850|gb|EFW97067.1| hypothetical protein HPODL_1777 [Ogataea parapolymorpha DL-1]
Length = 366
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 124/324 (38%), Positives = 195/324 (60%), Gaps = 30/324 (9%)
Query: 22 VEAVENTHGNQMSLDNPDEE---SEAETTESKAEDEESKEV-----------------CI 61
VE ++ G Q ++D+P+ E S+ E TE+ +D + ++ +
Sbjct: 38 VEELQEKFGMQ-TIDDPNPEVLPSDKELTEALPDDVQYIDLIQYKIRDLDALGLERFHSL 96
Query: 62 ERLLLRWNLIKKIENIHMLT---TLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIRE 117
E L+LR NL++ + L L+EL+LYDN++ I ++++ NL LDLSFN I+
Sbjct: 97 ESLVLRDNLLESANGLKKLPNKEKLEELDLYDNRIKHISKHINEFTNLTTLDLSFNNIKN 156
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII-ENLDGLTNLEELYL 176
IK L+ L LE LY N+I +I N++ LK LK LELG N+I +I E + L ++E+L+L
Sbjct: 157 IKHLEALTKLENLYFVQNRIKEIRNLETLKNLKNLELGGNRIEVISETMLHLPSIEQLWL 216
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEK 236
GKN IS+ +NL +L +L +LS+Q N++ IENL+ L +L +LYLS N LT +E L + K
Sbjct: 217 GKNMISKFENLQNLKRLRVLSIQSNKITKIENLDQLESLEELYLSHNKLTKLEGLDNLHK 276
Query: 237 LETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN-VLENNKQLQTIYLDRNPVA 295
L LDV N+IS ++N++HLTEL +FW + N++ ++ V L + L T+Y + NP+
Sbjct: 277 LMVLDVTANQISKLENLSHLTELTDFWCSYNKIDSFDNVREQLGHLPNLDTVYFEGNPIQ 336
Query: 296 QDPN--YRRKIKL-VCPWIVQIDA 316
+ YR K+KL + + +IDA
Sbjct: 337 LNAPALYRTKLKLNLGKSLQKIDA 360
>gi|397621124|gb|EJK66122.1| hypothetical protein THAOC_12977 [Thalassiosira oceanica]
Length = 445
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 170/268 (63%), Gaps = 14/268 (5%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLE----ILDLSFNRIREIK 119
++LR +LI+K+E I L L+ LELYDN + + ++D L E +LS+N IR++
Sbjct: 129 IVLRSHLIRKMEGIKGLKKLELLELYDNMVDSL-SIDELGGDEEGYPGKNLSYNVIRDMS 187
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII--ENLDGLTNLEELYLG 177
+ NL++LY+ NK+ I + HLK L+ L++G N+IR+I E L GL NLEEL+LG
Sbjct: 188 PVSLCPNLQELYIAQNKLKAISGIKHLKLLRKLDIGANRIRVIPSEELSGLQNLEELWLG 247
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEA-LTNLTQLYLSENGLT----TIENLL 232
KNKI +ID L +LTKL L +Q NRL T++NL A + L +LYL+ NG+T T+E+ L
Sbjct: 248 KNKIEKIDGLENLTKLRRLDVQSNRLTTVDNLHAQVDTLEELYLAHNGITVEGATVESGL 307
Query: 233 S--NEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLD 290
+ +L TLD++ N+++ ++HLT L + WI+ N + ++ V LE+ L IYL+
Sbjct: 308 ALKFTQLNTLDLSSNRLTDASPLSHLTSLTDLWISSNDIKTFDDVQPLESLTNLDGIYLE 367
Query: 291 RNPVAQDPNYRRKIKLVCPWIVQIDATL 318
NPVA D YR ++ + P + QIDA +
Sbjct: 368 HNPVASDFEYRMQLTKIIPSLTQIDANM 395
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLIN-LEILDLSFNRIREIK 119
+E L L N I+KI+ + LT L+ L++ N+LT ++NL ++ LE L L+ N I ++
Sbjct: 241 LEELWLGKNKIEKIDGLENLTKLRRLDVQSNRLTTVDNLHAQVDTLEELYLAHNGIT-VE 299
Query: 120 GLD-------HLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRI---IENLDGLT 169
G L L L SN+++ + HL L L + N I+ ++ L+ LT
Sbjct: 300 GATVESGLALKFTQLNTLDLSSNRLTDASPLSHLTSLTDLWISSNDIKTFDDVQPLESLT 359
Query: 170 NLEELYLGKNKIS 182
NL+ +YL N ++
Sbjct: 360 NLDGIYLEHNPVA 372
>gi|342180867|emb|CCC90342.1| putative protein phosphatase 1, regulatory subunit [Trypanosoma
congolense IL3000]
Length = 401
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 169/285 (59%), Gaps = 32/285 (11%)
Query: 64 LLLRWNLIKKIENI--HMLTTLKELELYDNQLTVIENLDTLIN----------------- 104
L LR NLI + H+ L+EL+ +DN++ I + ++
Sbjct: 100 LSLRKNLIHDLVPFPEHLAGRLEELDFFDNKIRKIHDFFQTVSVPGDVSTKRSLPGAFKC 159
Query: 105 LEILDLSFNRIREIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII- 162
L LDLS+N+IREI GL+ +A+ L +LYL NKI +I N++ L L++LELG N++R I
Sbjct: 160 LTKLDLSYNQIREISGLEPIAHCLRELYLVENKIKEISNLESLTNLELLELGGNRLRTIG 219
Query: 163 ENLDGLTNLEELYLGKNKISRI-DNLASLTKLNILSLQCNRLRTIENLEAL-----TNLT 216
L L++L++L+LGKNKIS I D+L L+ L ILSLQ NR+ +IE + NL
Sbjct: 220 PGLHKLSSLKQLWLGKNKISSIGDSLQGLSSLEILSLQANRITSIEENNFMGEVSNPNLR 279
Query: 217 QLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQ----NIAHLTELQEFWINDNQVSDW 272
++YLSENG+T+I+N+ ++ +D ++N I+ I N + L+EFW+ D ++ DW
Sbjct: 280 EVYLSENGITSIKNVGRLSSIKIIDFSFNPITSINGDEINPEKMPLLEEFWLTDGKIGDW 339
Query: 273 NTVNVLEN-NKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
V L L+T+YL+RNP+ D YR K+ + P++VQID+
Sbjct: 340 EEVGKLSGFTNSLRTVYLERNPIEDDKRYRDKVYMYLPFLVQIDS 384
>gi|429329386|gb|AFZ81145.1| leucine rich repeat domain-containing protein [Babesia equi]
Length = 312
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 178/294 (60%), Gaps = 8/294 (2%)
Query: 30 GNQMSLDNPDEESEAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELY 89
G + +D EE E + + + V +++L L N+I+KIEN+ L+ L+LY
Sbjct: 14 GEHLPIDEDAEEIELHLSRIRCIENLESCVNLKKLCLVSNVIEKIENLGNNLALEHLDLY 73
Query: 90 DNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKL 149
N++TVIEN++ L NL+ILDLSFN + +I+ +D L LE+LYL +N I KIENV +L
Sbjct: 74 QNKITVIENINHLTNLKILDLSFNHVSKIENIDALVKLEELYLSNNHIKKIENVSQFTQL 133
Query: 150 KVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIEN- 208
K+LE+G NKI ++ L +L L++GKN+++ +D L SL L SLQ NR+R +
Sbjct: 134 KLLEVGSNKISNYGEVEYLKSLTALWMGKNRLTTMD-LPSLPDLQKCSLQNNRIREWDAN 192
Query: 209 -LEALTNLTQLYLSENGLTTIENLLS-NEKLETLDVAYNKISIIQNIAHL-TELQEFWIN 265
LE NL + YLS N LT I ++ KL LD+ N+IS I +I + + ++E W+N
Sbjct: 193 VLENCPNLEEFYLSYNHLTEIPQFITLMPKLTILDLGNNQISKI-DIGEINSTIEELWLN 251
Query: 266 DNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ--DPNYRRKIKLVCPWIVQIDAT 317
DN + D VNVL+ L+ +YL+RNP+ P+YR +I + P + Q+DA
Sbjct: 252 DNAIEDEKEVNVLKKLGNLKVLYLERNPIQYKLGPSYRNRILDILPNLKQLDAV 305
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 152 LELGDNKI---RIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIEN 208
+E G + I RI E+L + EE+ L ++I I+NL S L L L N + IEN
Sbjct: 1 MEEGGDSICVQRIGEHLPIDEDAEEIELHLSRIRCIENLESCVNLKKLCLVSNVIEKIEN 60
Query: 209 LEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQ 268
L L L L +N +T IEN+ L+ LD+++N +S I+NI L +L+E ++++N
Sbjct: 61 LGNNLALEHLDLYQNKITVIENINHLTNLKILDLSFNHVSKIENIDALVKLEELYLSNNH 120
Query: 269 V 269
+
Sbjct: 121 I 121
>gi|392894927|ref|NP_001254924.1| Protein K10D2.8 [Caenorhabditis elegans]
gi|351064478|emb|CCD72863.1| Protein K10D2.8 [Caenorhabditis elegans]
Length = 335
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 158/257 (61%), Gaps = 1/257 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L LRWNL+KKI++ LT+L L L DNQ+ +ENL+TL+NL LD+S+NRI +I+G
Sbjct: 51 IRDLSLRWNLLKKIDHFQCLTSLTRLNLNDNQIEKLENLETLVNLVFLDVSYNRITKIEG 110
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE+L+L NKI IE ++ +K LE GDN+I+ +ENL L NLE L+LG N+
Sbjct: 111 LSELINLEELHLVHNKIITIEGLETNTAMKYLEFGDNRIQKMENLSHLVNLERLFLGANQ 170
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I +I+ L + +L LSL N L+ IE L+ L+ L + L++NG+ I+ L L++L
Sbjct: 171 IRKIEGLDGMAQLKELSLPGNALQIIEGLDTLSGLKSISLAQNGIRKIDGLSGLTNLKSL 230
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV-AQDPN 299
D+ N I ++N+ + I N+++ W V L+ + L + ++ NP+ + D
Sbjct: 231 DLNDNIIEKLENVEQFKGISSLMIRKNKLNCWQDVRQLKKLENLTVLTMEMNPLYSSDYT 290
Query: 300 YRRKIKLVCPWIVQIDA 316
YR ++K + P + +D
Sbjct: 291 YRNRVKEILPDVKLLDG 307
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 102/175 (58%), Gaps = 3/175 (1%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
S+ + +E L L N I IE + T +K LE DN++ +ENL L+NLE L L N+I
Sbjct: 112 SELINLEELHLVHNKIITIEGLETNTAMKYLEFGDNRIQKMENLSHLVNLERLFLGANQI 171
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
R+I+GLD +A L++L L N + IE +D L LK + L N IR I+ L GLTNL+ L
Sbjct: 172 RKIEGLDGMAQLKELSLPGNALQIIEGLDTLSGLKSISLAQNGIRKIDGLSGLTNLKSLD 231
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRL---RTIENLEALTNLTQLYLSENGLTT 227
L N I +++N+ ++ L ++ N+L + + L+ L NLT L + N L +
Sbjct: 232 LNDNIIEKLENVEQFKGISSLMIRKNKLNCWQDVRQLKKLENLTVLTMEMNPLYS 286
>gi|453085351|gb|EMF13394.1| L domain-like protein [Mycosphaerella populorum SO2202]
Length = 401
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 162/261 (62%), Gaps = 5/261 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++RL LR N I+KIE L+ELELYDN L IENL+ L L LDLS+N+++ IK
Sbjct: 137 LKRLCLRQNQIQKIELPDTCRGLEELELYDNLLKHIENLEELTELTTLDLSYNKLKHIKR 196
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ L L+ LY N+ISKIE ++ L L LELG N+IR IE L+ LT L L+LG+NK
Sbjct: 197 IAALTKLDHLYFVQNRISKIEGLETLTNLTYLELGANRIREIEGLETLTKLTSLWLGQNK 256
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + L +L+ L LS+Q NRL ++ +E++ +T+LY+S+N + ++E + + +LE L
Sbjct: 257 IAELKGLGTLSNLRSLSIQANRLTSLNGIESIPQITELYVSDNKIESLEPVKACTRLEIL 316
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNPVAQDPN 299
D N I ++ + L L+ W ++ Q+ + V L++ ++L+ +Y + NP+ Q N
Sbjct: 317 DFQSNPIRSLKGLEDLQSLENVWASNCQIDSFQEVERALKDKEKLEEVYFEGNPL-QRSN 375
Query: 300 ---YRRKIKLVCPWIVQIDAT 317
YR K++L P I +IDA
Sbjct: 376 PVLYRNKVRLALPQITKIDAA 396
>gi|156841194|ref|XP_001643972.1| hypothetical protein Kpol_1001p26 [Vanderwaltozyma polyspora DSM
70294]
gi|156114603|gb|EDO16114.1| hypothetical protein Kpol_1001p26 [Vanderwaltozyma polyspora DSM
70294]
Length = 346
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/268 (48%), Positives = 171/268 (63%), Gaps = 16/268 (5%)
Query: 64 LLLRWNLIKKIENIHMLT--TLKELELYDNQLTVIE-NLDTLINLEILDLSFNRIREIKG 120
L LR NLI+ I + +L TLKEL+LYDN++ I N++ L+ LE LD SFN I+ IK
Sbjct: 79 LCLRQNLIESISEVDVLPYDTLKELDLYDNRIKHISSNVNKLVALENLDFSFNNIKNIKN 138
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII--ENLDGLTNLEELYLGK 178
+D L NLE LY NKIS IEN+ L KLK LELG N I+ I ++ GL LEE++LGK
Sbjct: 139 IDKLVNLENLYFVQNKISVIENLSTLTKLKNLELGGNNIKEIGPDSFQGLEKLEEIWLGK 198
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N I R+ NL L L ILS+Q N+L+ IE LE L NL +LYLS N +T IENL N KL
Sbjct: 199 NSIPRLINLHHLKSLKILSIQGNKLKNIEGLEELENLEELYLSHNFITKIENLDKNLKLN 258
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQV-----SDWNTVNVLENNKQLQTIYLDRNP 293
TLD+ NKI I+N+ HLT L + W + N+V S + L N L+TIYL+ NP
Sbjct: 259 TLDITANKIEKIENLKHLTNLTDIWASFNKVDQTFESLGEELGKLPN---LETIYLEANP 315
Query: 294 VAQ--DPNYRRKIKL-VCPWIVQIDATL 318
+ + + +YRRK+ + + P + +IDAT
Sbjct: 316 IQRNNEISYRRKLMMNLGPSLQKIDATF 343
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E + L N I ++ N+H L +LK L + N+L IE L+ L NLE L LS N I +I+
Sbjct: 191 LEEIWLGKNSIPRLINLHHLKSLKILSIQGNKLKNIEGLEELENLEELYLSHNFITKIEN 250
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKI-----RIIENLDGLTNLEELY 175
LD L L + +NKI KIEN+ HL L + NK+ + E L L NLE +Y
Sbjct: 251 LDKNLKLNTLDITANKIEKIENLKHLTNLTDIWASFNKVDQTFESLGEELGKLPNLETIY 310
Query: 176 LGKNKISRIDNLASLTKL 193
L N I R + ++ KL
Sbjct: 311 LEANPIQRNNEISYRRKL 328
>gi|268563847|ref|XP_002647027.1| Hypothetical protein CBG03541 [Caenorhabditis briggsae]
Length = 1201
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 156/254 (61%), Gaps = 1/254 (0%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L LRWNL+KK+ ++ L+ L L L DNQ+ IENL+TL NLE LD+S+NRI +I+GL
Sbjct: 2 LSLRWNLLKKVPDVQCLSALTHLNLNDNQIEKIENLETLSNLEFLDVSYNRITKIEGLSG 61
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
LA L++L+L NKI IE ++ L+ LELGDN+IR IENL L+ L L+LG N+I +
Sbjct: 62 LAKLKELHLVHNKIVVIEGLEENTCLEYLELGDNRIRKIENLGHLSKLRRLFLGANQIRK 121
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I+NL L+ L LSL N ++ IE L+ L+ L L +++NG+ I+ L L +LD+
Sbjct: 122 IENLDELSTLRELSLPGNAIQVIEGLDKLSGLRSLSVAQNGIRKIDGLSGLTSLVSLDLN 181
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV-AQDPNYRR 302
N I ++N+ + + N++ W+ + L K+L + L+ NP+ + D YR
Sbjct: 182 DNIIEKLENVEQFKGVANLMLRKNKLDSWHDLYQLLEMKELTALTLEMNPIYSSDYTYRN 241
Query: 303 KIKLVCPWIVQIDA 316
++K + P I +D
Sbjct: 242 RMKQILPEIKILDG 255
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 3/147 (2%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
C+E L L N I+KIEN+ L+ L+ L L NQ+ IENLD L L L L N I+ I+
Sbjct: 86 CLEYLELGDNRIRKIENLGHLSKLRRLFLGANQIRKIENLDELSTLRELSLPGNAIQVIE 145
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
GLD L+ L L + N I KI+ + L L L+L DN I +EN++ + L L KN
Sbjct: 146 GLDKLSGLRSLSVAQNGIRKIDGLSGLTSLVSLDLNDNIIEKLENVEQFKGVANLMLRKN 205
Query: 180 KISRIDNLASL---TKLNILSLQCNRL 203
K+ +L L +L L+L+ N +
Sbjct: 206 KLDSWHDLYQLLEMKELTALTLEMNPI 232
>gi|219123951|ref|XP_002182278.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406239|gb|EEC46179.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 279
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/277 (38%), Positives = 171/277 (61%), Gaps = 22/277 (7%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLIN---------LEILDLS 111
+ +L+LR LI+ +E + L LELYDNQ +E L L + L +LD+S
Sbjct: 5 LSQLVLRSQLIRVMEGLEHFVQLDLLELYDNQ---VEELACLGDGEDGAPGKTLRVLDMS 61
Query: 112 FNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE--NLDGLT 169
+N IR+++ + NL++LYL +NK+ + + L KL+ ++LG N+IR ++ L L
Sbjct: 62 YNVIRDMQPVMFCPNLQELYLANNKLRNMAGLGSLTKLRKIDLGANRIREMDAAELAPLV 121
Query: 170 NLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT-NLTQLYLSENGLTTI 228
+LEEL+LGKNKI RI+ L++L KL L +Q NRL +ENL + T L +LYL+ NG+ T
Sbjct: 122 HLEELWLGKNKIERIEGLSTLKKLRRLDIQSNRLTQVENLTSQTETLEELYLAHNGIATE 181
Query: 229 ENLLSN------EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN-N 281
+L + E L LD++ N+++ + + HL L+E W++ N+++ ++ V L +
Sbjct: 182 GTILPSGLGQTFELLNVLDLSRNRLTQVNQLGHLKSLEELWLSGNKIATFDDVQNLSSLG 241
Query: 282 KQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDATL 318
+ LQT+YL+ NP+ +DP YR+K+ + P + QIDATL
Sbjct: 242 ESLQTVYLEYNPLQEDPLYRKKLAELIPSLSQIDATL 278
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 29/120 (24%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENL------------------- 99
V +E L L N I++IE + L L+ L++ N+LT +ENL
Sbjct: 121 VHLEELWLGKNKIERIEGLSTLKKLRRLDIQSNRLTQVENLTSQTETLEELYLAHNGIAT 180
Query: 100 ----------DTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKL 149
T L +LDLS NR+ ++ L HL +LE+L+L NKI+ ++V +L L
Sbjct: 181 EGTILPSGLGQTFELLNVLDLSRNRLTQVNQLGHLKSLEELWLSGNKIATFDDVQNLSSL 240
>gi|308457693|ref|XP_003091215.1| hypothetical protein CRE_07868 [Caenorhabditis remanei]
gi|308257942|gb|EFP01895.1| hypothetical protein CRE_07868 [Caenorhabditis remanei]
Length = 335
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/257 (39%), Positives = 160/257 (62%), Gaps = 1/257 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IE L LRWNL+KKI+++ LT L L L DNQ+ IENL+TL N+E LD+S+NRI I+G
Sbjct: 51 IENLSLRWNLLKKIDSLQCLTALTHLNLNDNQIEKIENLETLKNVEFLDISYNRITRIEG 110
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ L L++L+L NKI+KIE ++ +L+ LELGDN+I I+NL L+NL+ L+LG N+
Sbjct: 111 ISELKKLKELHLVHNKITKIEGLEENTELEYLELGDNRIAKIDNLGHLSNLKRLFLGANQ 170
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I +I+ L ++ L LSL N L+ IE L+ L+ L L L++NG+ I+ L + L +L
Sbjct: 171 IRKIEGLEGMSGLTELSLPGNALQVIEGLDTLSGLRSLCLAQNGIRKIDGLSELKSLFSL 230
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV-AQDPN 299
D+ N I ++N + + + N+ W + L+N + L ++ ++ NP+ + D
Sbjct: 231 DLNDNIIEKLENTQQVRGITSLMLRKNKFDSWQDLIQLQNLENLASLTMEMNPIYSSDYT 290
Query: 300 YRRKIKLVCPWIVQIDA 316
YR ++ + P + +D
Sbjct: 291 YRNRMNQILPKLKMLDG 307
>gi|403216137|emb|CCK70635.1| hypothetical protein KNAG_0E03810 [Kazachstania naganishii CBS
8797]
Length = 347
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/268 (47%), Positives = 176/268 (65%), Gaps = 12/268 (4%)
Query: 61 IERLLLRWNLIKKIENIHMLT--TLKELELYDNQLTVIEN-LDTLINLEILDLSFNRIRE 117
++ L LR NLI+ I + +L TL+EL+LYDN++ I ++ L+NL+ LDLSFN I+
Sbjct: 77 LQSLCLRQNLIESISEVDVLPANTLEELDLYDNRIKHISKYVNKLVNLKSLDLSFNNIKH 136
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE--NLDGLTNLEELY 175
IK +D L NLE LY NKI+KIEN+ LK L+ LELG N I IE + GL LE+++
Sbjct: 137 IKNVDKLVNLEDLYFVQNKITKIENLSTLKNLRNLELGGNGIHEIEPESFVGLDKLEQIW 196
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LGKN I R+ NL L L ILS+Q N+L+ IE LE L NL +LYLS N + IE L N
Sbjct: 197 LGKNSIPRLVNLTPLKSLKILSIQGNKLKKIEGLEELVNLEELYLSNNFIRKIEGLEKNT 256
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ---LQTIYLDRN 292
KL TLD+ NK++ I+NI+HLT+L + W + N + D + ++ E K+ L+TIYL+ N
Sbjct: 257 KLNTLDITSNKVTKIENISHLTQLTDIWASFNNI-DQSFESLGEELKELTSLETIYLEGN 315
Query: 293 PVAQ--DPNYRRKIKLVCP-WIVQIDAT 317
P+ + + +YRRK+ L P + +IDAT
Sbjct: 316 PIQRNNETSYRRKLVLNAPKSLEKIDAT 343
>gi|365986380|ref|XP_003670022.1| hypothetical protein NDAI_0D04660 [Naumovozyma dairenensis CBS 421]
gi|343768791|emb|CCD24779.1| hypothetical protein NDAI_0D04660 [Naumovozyma dairenensis CBS 421]
Length = 372
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/267 (45%), Positives = 177/267 (66%), Gaps = 12/267 (4%)
Query: 63 RLLLRWNLIKKIENIHMLT--TLKELELYDNQLTVIE-NLDTLINLEILDLSFNRIREIK 119
+L LR NLI+ I + +L + +L+ YDN++ I N++ L NL+ LDLSFN+I+ IK
Sbjct: 104 QLCLRQNLIESISEVEVLPHDKITDLDFYDNRIKHISSNVNYLTNLKNLDLSFNKIKNIK 163
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIEN--LDGLTNLEELYLG 177
+D L NLE LY NKISKIEN+ LK LK LELG N+++ +E GL NL+E++LG
Sbjct: 164 NIDKLINLENLYFVQNKISKIENLSTLKNLKNLELGGNRLQELEKDAFVGLENLQEIWLG 223
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN I ++ NL+ L L ILS+Q NRL+ IE LE LTNL +LY+S N ++ +E L +N+KL
Sbjct: 224 KNAIPKLVNLSPLKNLKILSIQANRLKKIEGLEELTNLEELYVSNNFISKLEGLENNKKL 283
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQL---QTIYLDRNPV 294
LD+ NKI+ I+NI+HL +L + W + N++ D + ++ E L +TIYL+ NP+
Sbjct: 284 TILDITANKITKIENISHLKQLTDLWASFNKI-DQSFQSLGEEMTDLPVFETIYLEGNPI 342
Query: 295 --AQDPNYRRKIKL-VCPWIVQIDATL 318
+ +YRRK+ L + P + +IDAT
Sbjct: 343 QLQNETSYRRKLILTLGPSLQKIDATF 369
>gi|15241153|ref|NP_197469.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
gi|27808582|gb|AAO24571.1| At5g19680 [Arabidopsis thaliana]
gi|110736219|dbj|BAF00080.1| hypothetical protein [Arabidopsis thaliana]
gi|332005354|gb|AED92737.1| leucine-rich repeat-containing protein [Arabidopsis thaliana]
Length = 328
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 169/266 (63%), Gaps = 9/266 (3%)
Query: 61 IERLLLRWNLI-----KKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+++L LR NLI + + + L+ L+EL L DN+L + ++ L + D+SFN I
Sbjct: 62 LKKLSLRQNLIDDSAVEPLSHWDALSDLEELVLRDNKLAKVPDVSIFTKLLVYDISFNEI 121
Query: 116 REIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
++G+ ++ L++LY+ N+++KI ++HL L++LELG N++R++ENL+ T LEEL
Sbjct: 122 TSLEGISKASSTLKELYVSKNEVNKIMEIEHLHNLQILELGSNRLRVMENLENFTKLEEL 181
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LG+N+I ++ NL L + +SLQ NRL +++ E L +LYLS NG++ +E L +
Sbjct: 182 WLGRNRI-KVVNLCGLKCIKKISLQSNRLTSMKGFEECVALEELYLSHNGISKMEGLSAL 240
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN--VLENNKQLQTIYLDRN 292
L LDV+ NK++ + +I +LT+L++ W+NDNQ+ + V + ++L TIYL+ N
Sbjct: 241 VNLRVLDVSNNKLTSVDDIQNLTKLEDLWLNDNQIESLEAITEAVTGSKEKLTTIYLENN 300
Query: 293 PVAQDPNYRRKIKLVCPWIVQIDATL 318
P A+ +Y ++ + P + QID+ L
Sbjct: 301 PCAKSSDYVAAVRQIFPNVEQIDSNL 326
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
CI+++ L+ N + ++ L+EL L N ++ +E L L+NL +LD+S N++ +
Sbjct: 198 CIKKISLQSNRLTSMKGFEECVALEELYLSHNGISKMEGLSALVNLRVLDVSNNKLTSVD 257
Query: 120 GLDHLANLEKLYLCSNKISKIENV 143
+ +L LE L+L N+I +E +
Sbjct: 258 DIQNLTKLEDLWLNDNQIESLEAI 281
>gi|157864104|ref|XP_001687598.1| protein phosphatase type 1 regulator-like protein [Leishmania major
strain Friedlin]
gi|68223809|emb|CAJ02041.1| protein phosphatase type 1 regulator-like protein [Leishmania major
strain Friedlin]
Length = 396
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 163/288 (56%), Gaps = 37/288 (12%)
Query: 64 LLLRWNLIKKIENI--HMLTTLKELELYDNQLTVIENL--------------------DT 101
L LR NLI ++ H+ L EL+L+DN++ + +
Sbjct: 91 LSLRKNLIHELSAFPQHLAGRLVELDLFDNKIRKVRDFFDSAMVPDPESGSLSKKAVPHA 150
Query: 102 LINLEILDLSFNRIREIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIR 160
+L LDLS+N++R+I GLD L + L++LYL NKI IE +D L++LELG N+IR
Sbjct: 151 FYSLTKLDLSYNQLRKITGLDSLGSTLKELYLVENKIKVIEGLDSFVHLELLELGGNRIR 210
Query: 161 -IIENLDGLTNLEELYLGKNKISRI-DNLASLTKLNILSLQCNRLRTIENLEALTN---- 214
I L L +L+ L+LGKNKI I D+L +L +L LSLQ NRL +I EA
Sbjct: 211 EIGSGLSNLRSLQSLWLGKNKIHSIGDSLHNLRELRKLSLQANRLTSI-TAEAFKEGCNP 269
Query: 215 -LTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQ----NIAHLTELQEFWINDNQV 269
L +LYLSENG++TIENL L LD ++N IS I N ++ EL+EFW+ D +
Sbjct: 270 YLAELYLSENGISTIENL-PLHSLHLLDFSFNPISTINEAVINPTNMPELEEFWLTDGSI 328
Query: 270 SDWNTVNVLEN-NKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
SDW V L+TIY++RNP+ QD YR K+ + P++ QID+
Sbjct: 329 SDWGEVKKFCGFANTLRTIYVERNPIEQDKRYRDKVYMNLPFVTQIDS 376
>gi|21536755|gb|AAM61087.1| unknown [Arabidopsis thaliana]
Length = 328
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 169/266 (63%), Gaps = 9/266 (3%)
Query: 61 IERLLLRWNLI-----KKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+++L LR NLI + + + L+ L+EL L DN+L + ++ L + D+SFN I
Sbjct: 62 LKKLSLRQNLIDDSAVEPLSHWDALSDLEELVLRDNKLAKVPDVSIFTKLLVYDISFNEI 121
Query: 116 REIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
++G+ ++ L++LY+ N+++KI ++HL L++LELG N++R++ENL+ T LEEL
Sbjct: 122 TSLEGISKASSTLKELYVSKNEVNKIMEIEHLHNLQILELGSNRLRVMENLENFTKLEEL 181
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LG+N+I ++ NL L + +SLQ NRL +++ E L +LYLS NG++ +E L +
Sbjct: 182 WLGRNRI-KVVNLCGLKCIKKISLQSNRLTSMKGFEECVALEELYLSHNGISKMEGLSAL 240
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN--VLENNKQLQTIYLDRN 292
L LDV+ NK++ + +I +LT+L++ W+NDNQ+ + V + ++L TIYL+ N
Sbjct: 241 VNLRVLDVSNNKLTSVDDIQNLTKLEDLWLNDNQIESLEAITEAVTGSKEKLTTIYLENN 300
Query: 293 PVAQDPNYRRKIKLVCPWIVQIDATL 318
P A+ +Y ++ + P + QID+ +
Sbjct: 301 PCAKSSDYVAAVRQIFPNVEQIDSNI 326
>gi|146077090|ref|XP_001463083.1| protein phosphatase type 1 regulator-like protein [Leishmania
infantum JPCM5]
gi|398010218|ref|XP_003858307.1| protein phosphatase type 1 regulator-like protein [Leishmania
donovani]
gi|134067165|emb|CAM65430.1| protein phosphatase type 1 regulator-like protein [Leishmania
infantum JPCM5]
gi|322496513|emb|CBZ31583.1| protein phosphatase type 1 regulator-like protein [Leishmania
donovani]
Length = 396
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 165/287 (57%), Gaps = 35/287 (12%)
Query: 64 LLLRWNLIKKIENI--HMLTTLKELELYDNQLTVIENL--------------------DT 101
L LR NLI ++ H+ L EL+L+DN++ + +
Sbjct: 91 LSLRKNLIHELSAFPQHLAGRLVELDLFDNKIRKVRDFFDSAMVPDPESGSLSKKAVPHA 150
Query: 102 LINLEILDLSFNRIREIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIR 160
+L LDLS+N++R+I GLD L + L++LYL NKI IE +D L++LELG N+IR
Sbjct: 151 FYSLTKLDLSYNQLRKITGLDSLGSTLKELYLVENKIKVIEGLDSFVHLELLELGGNRIR 210
Query: 161 -IIENLDGLTNLEELYLGKNKISRI-DNLASLTKLNILSLQCNRLRTI--ENLEALTN-- 214
I L L +L+ L+LGKNKI I D+L +L +L LSLQ NRL +I E + N
Sbjct: 211 EIGSGLSNLRSLQSLWLGKNKIHSIGDSLHNLRELRKLSLQANRLASITEEAFKEGCNPY 270
Query: 215 LTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQ----NIAHLTELQEFWINDNQVS 270
LT+LYLSENG++TIENL L LD ++N IS I N ++ EL+EFW+ D ++
Sbjct: 271 LTELYLSENGISTIENL-PLHSLHLLDFSFNPISTINEAVINPTNMPELEEFWLTDGNIN 329
Query: 271 DWNTVNVLEN-NKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
DW V L+TIY++RNP+ QD YR K+ + P++ QID+
Sbjct: 330 DWGEVKKFCGFANTLRTIYVERNPIEQDKRYRDKVYMNLPFVTQIDS 376
>gi|6322655|ref|NP_012728.1| Sds22p [Saccharomyces cerevisiae S288c]
gi|549741|sp|P36047.1|SDS22_YEAST RecName: Full=Protein phosphatase 1 regulatory subunit SDS22
gi|486343|emb|CAA82037.1| SDS22 [Saccharomyces cerevisiae]
gi|619516|emb|CAA58588.1| Sds22p [Saccharomyces cerevisiae]
gi|1042084|gb|AAB34673.1| Egp1=Sds22 homolog [Saccharomyces cerevisiae=baker's yeast,
NH102-2C-M5, Peptide, 338 aa]
gi|45270518|gb|AAS56640.1| YKL193C [Saccharomyces cerevisiae]
gi|151941726|gb|EDN60087.1| Glc7p regulatory subunit [Saccharomyces cerevisiae YJM789]
gi|190409650|gb|EDV12915.1| protein phosphatases PP1 regulatory subunit SDS22 [Saccharomyces
cerevisiae RM11-1a]
gi|256274310|gb|EEU09217.1| Sds22p [Saccharomyces cerevisiae JAY291]
gi|285813076|tpg|DAA08973.1| TPA: Sds22p [Saccharomyces cerevisiae S288c]
gi|365764498|gb|EHN06020.1| Sds22p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 338
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/268 (47%), Positives = 178/268 (66%), Gaps = 12/268 (4%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLK--ELELYDNQLTVIE-NLDTLINLEILDLSFNRIRE 117
+++L LR NLI+ I + +L K +L+ YDN++ I N++ L L LDLSFN+I+
Sbjct: 68 LKQLCLRQNLIESISEVEVLPHDKIVDLDFYDNKIKHISSNVNKLTKLTSLDLSFNKIKH 127
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE--NLDGLTNLEELY 175
IK L++L +LE LY N ISKIEN+ LK LK LELG NK+ IE + +GL+NLEE++
Sbjct: 128 IKNLENLTDLENLYFVQNSISKIENLSTLKSLKNLELGGNKVHSIEPDSFEGLSNLEEIW 187
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LGKN I R+ NL L L ILS+Q N+L+ IENLE LTNL +LYLS N +T IE L N
Sbjct: 188 LGKNSIPRLINLHPLKNLKILSIQSNKLKKIENLEELTNLEELYLSHNFITKIEGLEKNL 247
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN---NKQLQTIYLDRN 292
KL TLDV NKI+ ++N+ HL+ L + W + N++ D + ++ EN +L+TIYL+ N
Sbjct: 248 KLTTLDVTSNKITSLENLNHLSNLTDIWASFNKI-DQSFESLGENLSALSRLETIYLEGN 306
Query: 293 PVA--QDPNYRRKIKL-VCPWIVQIDAT 317
P+ +YRRK+ + + P + +IDAT
Sbjct: 307 PIQLENKTSYRRKLTMNLPPSLQKIDAT 334
>gi|349579380|dbj|GAA24542.1| K7_Sds22p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 338
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/268 (47%), Positives = 178/268 (66%), Gaps = 12/268 (4%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLK--ELELYDNQLTVIE-NLDTLINLEILDLSFNRIRE 117
+++L LR NLI+ I + +L K +L+ YDN++ I N++ L L LDLSFN+I+
Sbjct: 68 LKQLCLRQNLIESISEVEVLPHDKIVDLDFYDNKIKHISSNVNKLTKLTSLDLSFNKIKH 127
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE--NLDGLTNLEELY 175
IK L++L +LE LY N ISKIEN+ LK LK LELG NK+ IE + +GL+NLEE++
Sbjct: 128 IKNLENLTDLENLYFVQNSISKIENLSTLKSLKNLELGGNKVHSIEPDSFEGLSNLEEIW 187
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LGKN I R+ NL L L ILS+Q N+L+ IENLE LTNL +LYLS N +T IE L N
Sbjct: 188 LGKNSIPRLINLHPLKNLKILSIQSNKLKKIENLEELTNLEELYLSHNFITKIEGLEKNL 247
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN---NKQLQTIYLDRN 292
KL TLDV NKI+ ++N+ HL+ L + W + N++ D + ++ EN +L+TIYL+ N
Sbjct: 248 KLTTLDVTSNKITSLENLNHLSNLTDIWASFNKI-DQSFESLGENLSGLSRLETIYLEGN 306
Query: 293 PVA--QDPNYRRKIKL-VCPWIVQIDAT 317
P+ +YRRK+ + + P + +IDAT
Sbjct: 307 PIQLENKTSYRRKLTMNLPPSLQKIDAT 334
>gi|261327947|emb|CBH10924.1| protein phosphatase 1, regulatory subunit,putative [Trypanosoma
brucei gambiense DAL972]
Length = 403
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 158/264 (59%), Gaps = 30/264 (11%)
Query: 83 LKELELYDNQLTVIENL-------------DTLIN----LEILDLSFNRIREIKGLDHLA 125
L EL+L+DN++ + + TL N L LDLS+N+IREI GLD +
Sbjct: 123 LDELDLFDNKIRKLNDFFETVTVPGDPPTTKTLPNAYKCLTKLDLSYNQIREIGGLDSIG 182
Query: 126 N-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII-ENLDGLTNLEELYLGKNKISR 183
L +LYL NKI +++N+D L L++LELG N++R I L+ LT L++L+LGKNKIS
Sbjct: 183 GTLRELYLVENKIKEVKNLDSLVNLELLELGGNRLRAIGSGLEKLTKLKQLWLGKNKISS 242
Query: 184 IDN-LASLTKLNILSLQCNRLRTIE-----NLEALTNLTQLYLSENGLTTIENLLSNEKL 237
I L L L ILSLQ NR+ +++ +A NL ++YLSENGLT++ N+ +
Sbjct: 243 IGTALHKLVSLEILSLQANRITSVDAENFLGAKANPNLREVYLSENGLTSVGNVRRLSTI 302
Query: 238 ETLDVAYNKISIIQ----NIAHLTELQEFWINDNQVSDWNTVNVLEN-NKQLQTIYLDRN 292
+ +D ++N I I N + +L+EFW+ D ++DW V L L+T+YL+RN
Sbjct: 303 KIIDFSFNSICSIDAEEINPQTMPKLEEFWLTDGNIADWEEVGKLSGFTSTLKTVYLERN 362
Query: 293 PVAQDPNYRRKIKLVCPWIVQIDA 316
P+ +D YR K+ + P++VQID+
Sbjct: 363 PIEEDKRYRDKVYMYLPFLVQIDS 386
>gi|385302796|gb|EIF46908.1| protein phosphatases pp1 regulatory subunit sds22 [Dekkera
bruxellensis AWRI1499]
Length = 388
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 157/236 (66%), Gaps = 6/236 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLT---TLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIR 116
+E L LR NLI + + L+ TL+EL+LYDN++ + ++++L NL+ LDLSFN I+
Sbjct: 141 VESLALRDNLIVSLHELKHLSCKSTLQELDLYDNRIKHLSHHINSLKNLKTLDLSFNNIK 200
Query: 117 EIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKI-RIIENLDGLTNLEELY 175
IK LD+L+ LE LY NKI IEN+D LK LK LE G NKI RI E+L L LE+L+
Sbjct: 201 HIKHLDNLSKLENLYFVQNKIHVIENLDGLKNLKNLEFGGNKIQRISESLLDLPTLEQLW 260
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LG+N+I++ +NL +L L ILS+Q NR+ I L++L +L +LY+S N LT IE L + +
Sbjct: 261 LGQNRITKFENLENLKNLRILSIQSNRIDHIGGLDSLESLEELYVSHNRLTKIEGLDNLK 320
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLD 290
KLE LD+ NKI+ I+N+ HL L +FW + N + + + B L +L+T+Y +
Sbjct: 321 KLEILDITGNKITKIENMXHLKNLTDFWASYNLIDSFEXISBELSXLPKLETVYFE 376
>gi|12844932|dbj|BAB26554.1| unnamed protein product [Mus musculus]
Length = 284
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/154 (57%), Positives = 121/154 (78%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR NLIK IEN+ L +L+EL+LYDNQ+ IENL+ L LE+LD+SFN +R I+G
Sbjct: 101 VKSLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEVLDISFNMLRNIEG 160
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+D L L+KL+L +NKI+KIEN+ +L +L++LELG N+IR IEN+D LTNLE L+LGKNK
Sbjct: 161 IDKLTQLKKLFLVNNKINKIENISNLHQLQMLELGSNRIRAIENIDTLTNLESLFLGKNK 220
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTN 214
I+++ NL +LT L +LS+Q NRL IE L++L N
Sbjct: 221 ITKLQNLDALTNLTVLSVQSNRLAKIEGLQSLVN 254
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 134/221 (60%), Gaps = 12/221 (5%)
Query: 37 NPDEESEAETTESKAED-EESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTV 95
N E+S + + AED EE E+ ++ +E I++ ++++L ++
Sbjct: 43 NLSEQSLKDGVDRGAEDPEEEHELAVD-----------METINLDRDAEDVDLTHYRIGK 91
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELG 155
IE L+ L ++ L L N I+ I+ L+ L +L +L L N+I KIEN++ L +L+VL++
Sbjct: 92 IEGLEVLKKVKSLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENLEALTELEVLDIS 151
Query: 156 DNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNL 215
N +R IE +D LT L++L+L NKI++I+N+++L +L +L L NR+R IEN++ LTNL
Sbjct: 152 FNMLRNIEGIDKLTQLKKLFLVNNKINKIENISNLHQLQMLELGSNRIRAIENIDTLTNL 211
Query: 216 TQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
L+L +N +T ++NL + L L V N+++ I+ + L
Sbjct: 212 ESLFLGKNKITKLQNLDALTNLTVLSVQSNRLAKIEGLQSL 252
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 95/153 (62%)
Query: 128 EKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNL 187
E + L +I KIE ++ LKK+K L L N I+ IENL+ L +L EL L N+I +I+NL
Sbjct: 80 EDVDLTHYRIGKIEGLEVLKKVKSLCLRQNLIKCIENLEELQSLRELDLYDNQIKKIENL 139
Query: 188 ASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKI 247
+LT+L +L + N LR IE ++ LT L +L+L N + IEN+ + +L+ L++ N+I
Sbjct: 140 EALTELEVLDISFNMLRNIEGIDKLTQLKKLFLVNNKINKIENISNLHQLQMLELGSNRI 199
Query: 248 SIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
I+NI LT L+ ++ N+++ ++ L N
Sbjct: 200 RAIENIDTLTNLESLFLGKNKITKLQNLDALTN 232
>gi|72388876|ref|XP_844733.1| protein phosphatase 1, regulatory subunit [Trypanosoma brucei
TREU927]
gi|62176142|gb|AAX70260.1| protein phosphatase 1, regulatory subunit, putative [Trypanosoma
brucei]
gi|70801267|gb|AAZ11174.1| protein phosphatase 1, regulatory subunit, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 403
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 158/264 (59%), Gaps = 30/264 (11%)
Query: 83 LKELELYDNQLTVIENL-------------DTLIN----LEILDLSFNRIREIKGLDHLA 125
L EL+L+DN++ + + TL N L LDLS+N+IREI GLD +
Sbjct: 123 LDELDLFDNKIRKLNDFFETVTVPGDPPTTKTLPNAYKCLTKLDLSYNQIREIGGLDSIG 182
Query: 126 N-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII-ENLDGLTNLEELYLGKNKISR 183
L +LYL NKI +++N+D L L++LELG N++R I L+ LT L++L+LGKNKIS
Sbjct: 183 GTLRELYLVENKIKEVKNLDSLVNLELLELGGNRLRAIGSGLEKLTKLKQLWLGKNKISS 242
Query: 184 IDN-LASLTKLNILSLQCNRLRTIE-----NLEALTNLTQLYLSENGLTTIENLLSNEKL 237
I L L L ILSLQ NR+ +++ +A NL ++YLSENGLT++ N+ +
Sbjct: 243 IGTALHKLVSLEILSLQANRITSVDAENFLGAKANPNLREVYLSENGLTSVGNVRHLSTI 302
Query: 238 ETLDVAYNKISIIQ----NIAHLTELQEFWINDNQVSDWNTVNVLEN-NKQLQTIYLDRN 292
+ +D ++N I I N + +L+EFW+ D ++DW V L L+T+YL+RN
Sbjct: 303 KIIDFSFNSICSIDAEEINPQTMPKLEEFWLTDGNIADWEEVGKLSGFTSTLKTVYLERN 362
Query: 293 PVAQDPNYRRKIKLVCPWIVQIDA 316
P+ +D YR K+ + P++VQID+
Sbjct: 363 PIEEDKRYRDKVYMYLPFLVQIDS 386
>gi|302811761|ref|XP_002987569.1| hypothetical protein SELMODRAFT_183219 [Selaginella moellendorffii]
gi|300144723|gb|EFJ11405.1| hypothetical protein SELMODRAFT_183219 [Selaginella moellendorffii]
Length = 317
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 165/264 (62%), Gaps = 9/264 (3%)
Query: 61 IERLLLRWNL-----IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+++L LR NL ++ + L L+EL L DN+LT + + L L + D+SFN +
Sbjct: 52 LKKLSLRQNLLADDAVQALGEWPSLFGLQELVLRDNKLTRLPPVGGLSELVVFDVSFNEL 111
Query: 116 REIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
+ G++ + + L +LYL N+I K+E ++H+++L++LELG N+IR++E ++ + LEEL
Sbjct: 112 TSLDGMNKVCSKLRELYLSKNEIVKMEQLEHMQELRLLELGSNRIRVLEGIENMKRLEEL 171
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LG+N+I R NL LT + LSLQ NRL ++ E L +LYLS NG++ +E L +
Sbjct: 172 WLGRNRI-RTVNLCGLTSIVKLSLQSNRLTSMLGFEECLALEELYLSHNGISKMEGLATL 230
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQ-LQTIYLDRN 292
L LDV+ N+++ I ++ +L +L++ W+NDN + + + +L +Q L TIYL+RN
Sbjct: 231 VNLRVLDVSSNRLTSIADVENLEKLEDLWLNDNNIPSLDGIETILSGPRQSLSTIYLERN 290
Query: 293 PVAQDPNYRRKIKLVCPWIVQIDA 316
P A D +Y K+ P + QID+
Sbjct: 291 PCASDSSYVNKLIAALPKLGQIDS 314
>gi|302830999|ref|XP_002947065.1| hypothetical protein VOLCADRAFT_103293 [Volvox carteri f.
nagariensis]
gi|300267472|gb|EFJ51655.1| hypothetical protein VOLCADRAFT_103293 [Volvox carteri f.
nagariensis]
Length = 363
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 154/242 (63%), Gaps = 7/242 (2%)
Query: 82 TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHL--ANLEKLYLCSNKISK 139
L++LE DN L+ I L + L LD S+N+IR + L L + LE+LY+ +NK++
Sbjct: 81 ALEDLEFRDNHLSTIPCLQGFLQLRRLDCSYNQIRNLLPLADLNSSKLEELYVANNKVTA 140
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I + HL L +LELG N+IR+IE + LT L+EL+LG+N+I+ +D L +L L +SLQ
Sbjct: 141 IAALSHLTSLTLLELGSNRIRVIEGIASLTGLQELWLGRNRITNVDGLTTLVNLRRISLQ 200
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII--QNIAHLT 257
NRL ++ LEA T L +LYLS NG+ T+E L +L+ LDV+ N+++ + +A LT
Sbjct: 201 SNRLTSMLGLEACTALEELYLSHNGIATLEGLGPLTRLKILDVSSNRLTAVDPSALATLT 260
Query: 258 ELQEFWINDNQVSDWNTV--NVLENNKQ-LQTIYLDRNPVAQDPNYRRKIKLVCPWIVQI 314
+L++ W+NDN++ + VL+ + L IYL+ NP A DP Y+RK+ + P + Q+
Sbjct: 261 QLEDLWLNDNRIPAIDAALDRVLDPVRHSLTCIYLEGNPAASDPQYKRKLVNMLPKLKQL 320
Query: 315 DA 316
DA
Sbjct: 321 DA 322
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI-- 118
+ R+ L+ N + + + T L+EL L N + +E L L L+ILD+S NR+ +
Sbjct: 194 LRRISLQSNRLTSMLGLEACTALEELYLSHNGIATLEGLGPLTRLKILDVSSNRLTAVDP 253
Query: 119 KGLDHLANLEKLYLCSNKISKIE 141
L L LE L+L N+I I+
Sbjct: 254 SALATLTQLEDLWLNDNRIPAID 276
>gi|259147649|emb|CAY80899.1| Sds22p [Saccharomyces cerevisiae EC1118]
Length = 338
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 125/268 (46%), Positives = 177/268 (66%), Gaps = 12/268 (4%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLK--ELELYDNQLTVIE-NLDTLINLEILDLSFNRIRE 117
+++L LR NLI+ I + +L K +L+ YDN++ I N++ L L LDLSFN+I+
Sbjct: 68 LKQLCLRQNLIESISEVEVLPHDKIVDLDFYDNKIKHISSNVNKLTKLTSLDLSFNKIKH 127
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE--NLDGLTNLEELY 175
IK L++L +LE LY N ISKIEN+ LK LK LELG NK+ IE + +GL+NLEE++
Sbjct: 128 IKNLENLTDLENLYFVQNSISKIENLSTLKSLKNLELGGNKVHSIEPDSFEGLSNLEEIW 187
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LGKN I R+ NL L L ILS+Q N+L+ IENLE LTNL +LYL N +T IE L N
Sbjct: 188 LGKNSIPRLINLHPLKNLKILSIQSNKLKKIENLEELTNLEELYLYHNFITKIEGLEKNL 247
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN---NKQLQTIYLDRN 292
KL TLDV NKI+ ++N+ HL+ L + W + N++ D + ++ EN +L+TIYL+ N
Sbjct: 248 KLTTLDVTSNKITSLENLNHLSNLTDIWASFNKI-DQSFESLGENLSALSRLETIYLEGN 306
Query: 293 PVA--QDPNYRRKIKL-VCPWIVQIDAT 317
P+ +YRRK+ + + P + +IDAT
Sbjct: 307 PIQLENKTSYRRKLTMNLPPSLQKIDAT 334
>gi|302822351|ref|XP_002992834.1| hypothetical protein SELMODRAFT_187027 [Selaginella moellendorffii]
gi|300139382|gb|EFJ06124.1| hypothetical protein SELMODRAFT_187027 [Selaginella moellendorffii]
Length = 317
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 165/264 (62%), Gaps = 9/264 (3%)
Query: 61 IERLLLRWNL-----IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+++L LR NL ++ + L L+EL L DN+LT + + L L + D+SFN +
Sbjct: 52 LKKLSLRQNLLADDAVQALGEWPSLFGLQELVLRDNKLTRLPPVGGLSELVVFDVSFNEL 111
Query: 116 REIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
+ G++ + + L +LYL N+I K+E ++H+++L++LELG N+IR++E ++ + LEEL
Sbjct: 112 TSLDGMNKVCSKLRELYLSKNEIVKMEQLEHMQELRLLELGSNRIRVLEGIENMKRLEEL 171
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LG+N+I R NL LT + LSLQ NRL ++ E L +LYLS NG++ +E L +
Sbjct: 172 WLGRNRI-RTVNLCGLTSIVKLSLQNNRLTSMLGFEECLALEELYLSHNGISKMEGLATL 230
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQ-LQTIYLDRN 292
L LDV+ N+++ I ++ +L +L++ W+NDN + + + +L +Q L TIYL+RN
Sbjct: 231 VNLRVLDVSSNRLTSIADVENLEKLEDLWLNDNNIPSLDGIETILSGPRQSLSTIYLERN 290
Query: 293 PVAQDPNYRRKIKLVCPWIVQIDA 316
P A D +Y K+ P + QID+
Sbjct: 291 PCASDSSYVNKLIAALPKLGQIDS 314
>gi|154297255|ref|XP_001549055.1| hypothetical protein BC1G_12463 [Botryotinia fuckeliana B05.10]
Length = 342
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/267 (40%), Positives = 156/267 (58%), Gaps = 43/267 (16%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNR 114
S+ ++RL LR N I IE++ L +TL +L+LYDN + I L+ LINL LDLSFN+
Sbjct: 111 SRFTQVQRLCLRQNTISAIEDLSCLASTLTDLDLYDNLIAHIRGLEDLINLTSLDLSFNK 170
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
++ IK L+HL +L LY NKI+ IEN++ L KL+ LEL N+IR I+ LD LT LEEL
Sbjct: 171 LKHIKKLNHLTSLTDLYFVQNKITTIENLEGLSKLRNLELAANRIREIQGLDTLTGLEEL 230
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LGKNKI+ + NL +L L ILS+Q NR+R I T+ +L
Sbjct: 231 WLGKNKITEMKNLDALQNLKILSIQSNRIRDI--------------------TVSSLKGL 270
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQLQTIYLDRNP 293
E L+ EL+E W + N+++D+N V L++ ++L T+Y + NP
Sbjct: 271 EGLK-------------------ELEEVWASYNKIADFNDVEEHLKDKEKLNTVYFEGNP 311
Query: 294 VA-QDPN-YRRKIKLVCPWIVQIDATL 318
+ + P YR K++L P ++QIDAT
Sbjct: 312 LQLKGPALYRNKVRLALPQVMQIDATF 338
>gi|297808031|ref|XP_002871899.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297317736|gb|EFH48158.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 328
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 167/266 (62%), Gaps = 9/266 (3%)
Query: 61 IERLLLRWNLI--KKIENIHMLTTLKELE---LYDNQLTVIENLDTLINLEILDLSFNRI 115
+++L LR NLI +E + L +LE L DN+L + +++ L + D+SFN I
Sbjct: 62 LKKLSLRQNLIDDSAVEPLSHWDALSDLEVLVLRDNKLAKVPDINIFTKLLVFDISFNEI 121
Query: 116 REIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
++G ++ L++LY+ N+++KI ++HL L++LELG N++R++ENL+ T LEEL
Sbjct: 122 TSLEGTSKASSTLKELYVSKNEVNKIVEIEHLHNLQILELGSNRLRVMENLENFTKLEEL 181
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LG+N+I ++ NL L + +SLQ NRL +++ E L +LYLS NG++ +E L +
Sbjct: 182 WLGRNRI-KVVNLCGLKCIKKISLQSNRLTSMKGFEECVALEELYLSHNGISKMEGLNAL 240
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN--VLENNKQLQTIYLDRN 292
L LDV+ NK++ + +I +LT+L++ W+NDNQ+ + V + ++L TIYL+ N
Sbjct: 241 VTLRVLDVSNNKLTSVDDIQNLTKLEDLWLNDNQIESLEAITEAVTGSKEKLTTIYLENN 300
Query: 293 PVAQDPNYRRKIKLVCPWIVQIDATL 318
P A+ +Y ++ + P + QID+ L
Sbjct: 301 PCAKSSDYVAVVRQIFPNVEQIDSNL 326
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
CI+++ L+ N + ++ L+EL L N ++ +E L+ L+ L +LD+S N++ +
Sbjct: 198 CIKKISLQSNRLTSMKGFEECVALEELYLSHNGISKMEGLNALVTLRVLDVSNNKLTSVD 257
Query: 120 GLDHLANLEKLYLCSNKISKIENV 143
+ +L LE L+L N+I +E +
Sbjct: 258 DIQNLTKLEDLWLNDNQIESLEAI 281
>gi|363754954|ref|XP_003647692.1| hypothetical protein Ecym_7018 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891728|gb|AET40875.1| hypothetical protein Ecym_7018 [Eremothecium cymbalariae
DBVPG#7215]
Length = 353
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/268 (45%), Positives = 171/268 (63%), Gaps = 12/268 (4%)
Query: 61 IERLLLRWNLIKKIENIHMLTT--LKELELYDNQLTVI-ENLDTLINLEILDLSFNRIRE 117
+E+L LR NLI+ I + +L L+EL+LYDN++ I N++ L+ L+ LD SFN+I+
Sbjct: 83 LEKLYLRQNLIESISEVEVLPADHLEELDLYDNRIKHISRNVNKLVKLKNLDFSFNKIKN 142
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII--ENLDGLTNLEELY 175
IK +D L LE+LY NKIS IEN++ L LK LELG N+I I ++L GL LEE++
Sbjct: 143 IKNIDKLTQLERLYFVQNKISVIENLNTLTDLKSLELGGNRITEIGPDSLRGLDKLEEIW 202
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LGKN I+R NL L L ILS+Q N+LR IE LE L NL +LYLS N + I L N
Sbjct: 203 LGKNSITRFMNLQYLKNLKILSIQSNKLRVIEGLEELENLEELYLSHNFIEHISGLEKNV 262
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN---NKQLQTIYLDRN 292
KL TLD+ NK++ I+N+ HL L + W + NQ+ D + ++ E + +TIYL+ N
Sbjct: 263 KLTTLDITANKLTKIENVKHLKRLTDLWASFNQI-DQSFESLGEELIALPEFETIYLEGN 321
Query: 293 PV--AQDPNYRRKIKL-VCPWIVQIDAT 317
P+ + YRRK+ L + P + +IDAT
Sbjct: 322 PIQTKNETTYRRKLVLNLGPSLQKIDAT 349
>gi|84996475|ref|XP_952959.1| protein phosphatase regulator subunit [Theileria annulata strain
Ankara]
gi|65303956|emb|CAI76335.1| protein phosphatase regulator subunit, putative [Theileria
annulata]
Length = 308
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 174/289 (60%), Gaps = 6/289 (2%)
Query: 30 GNQMSLDNPDEESEAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELY 89
G +++++ E E + K + S +++L L N+I KIEN+ T L+ L+LY
Sbjct: 13 GQDLTVEDSAEVVEFHLSRIKYIENLSHLKNLKKLCLVSNIIHKIENLEQNTELEHLDLY 72
Query: 90 DNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKL 149
N++ IENL+ L NL++LDLSFN I +I+ L+ L LE+LYL +NKIS+ N+ H K L
Sbjct: 73 QNRIKHIENLENLTNLKVLDLSFNEIDKIENLETLDKLEQLYLSNNKISEACNLAHFKNL 132
Query: 150 KVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIEN- 208
+LELG NK+R +++ L L L+LGKNK++ + ++ L L S+Q NR+R +
Sbjct: 133 TLLELGSNKVRDYGDVEHLRTLNALWLGKNKLTTM-SIPELPNLEKCSIQNNRVREWDEC 191
Query: 209 -LEALTNLTQLYLSENGLTTIENLLS-NEKLETLDVAYNKISIIQNIAHLTELQEFWIND 266
L+ L NL + YLS N LT I + +S L LD+ N+IS I +A L+E W+ND
Sbjct: 192 ILKNLPNLREFYLSYNKLTEIPSFISLMSNLVILDLGNNRISKIHPLAENHTLEELWLND 251
Query: 267 NQVSDWNTVNVLENNKQLQTIYLDRNPVAQ--DPNYRRKIKLVCPWIVQ 313
N++ D + V VL + K L+ +YL+RNP+ P+YR ++ + P I
Sbjct: 252 NEIDDLSEVKVLTSLKALKVLYLERNPLQFKLGPSYRNRVLDILPSIFH 300
>gi|255546363|ref|XP_002514241.1| protein phosphatases pp1 regulatory subunit, putative [Ricinus
communis]
gi|223546697|gb|EEF48195.1| protein phosphatases pp1 regulatory subunit, putative [Ricinus
communis]
Length = 312
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 157/243 (64%), Gaps = 9/243 (3%)
Query: 61 IERLLLRWNL-----IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+++L LR NL I+ L+ L+EL L DN+L I ++ +L + D+SFN I
Sbjct: 71 LKKLSLRQNLVDDAAIQPFSGWEELSGLEELVLRDNKLMKIPDVTIFKSLLVFDVSFNEI 130
Query: 116 REIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
R + GL ++N L++LY+ N+++K+E +DHL +L++LELG N++R++ENL LT L+EL
Sbjct: 131 RSLNGLSKVSNTLKELYVSKNEVTKMEEIDHLYQLQMLELGSNRLRVMENLQNLTTLQEL 190
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+LG+N+I I NL L + LSLQ NRL +++ LE L +LYLS NG++ +E L +
Sbjct: 191 WLGRNRIKTI-NLCGLKCIKKLSLQSNRLTSMKGLEECVALEELYLSHNGISKMEGLSTL 249
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV--NVLENNKQLQTIYLDRN 292
L LDV+ NK++ + +I +LT++++ W+NDNQ+ + ++ + ++L TIY + N
Sbjct: 250 VNLSVLDVSSNKLTSVDDIQNLTQIEDLWLNDNQIESLEGIAEAIVGSREKLTTIYFENN 309
Query: 293 PVA 295
P
Sbjct: 310 PCV 312
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
CI++L L+ N + ++ + L+EL L N ++ +E L TL+NL +LD+S N++ +
Sbjct: 207 CIKKLSLQSNRLTSMKGLEECVALEELYLSHNGISKMEGLSTLVNLSVLDVSSNKLTSVD 266
Query: 120 GLDHLANLEKLYLCSNKISKIENV 143
+ +L +E L+L N+I +E +
Sbjct: 267 DIQNLTQIEDLWLNDNQIESLEGI 290
>gi|401415029|ref|XP_003872011.1| protein phosphatase type 1 regulator-like protein [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322488232|emb|CBZ23478.1| protein phosphatase type 1 regulator-like protein [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 396
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 164/287 (57%), Gaps = 35/287 (12%)
Query: 64 LLLRWNLIKKIENI--HMLTTLKELELYDNQLTVIENL--------------------DT 101
L LR NLI ++ H+ L EL+L+DN++ + +
Sbjct: 91 LSLRKNLIHELSAFPQHLAGRLVELDLFDNKIRKVRDFFDSALVPDPESGSLSKKAVPHA 150
Query: 102 LINLEILDLSFNRIREIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIR 160
+L LDLS+N++R+I GLD L + L++LYL NKI IE + L++LELG N+IR
Sbjct: 151 FYSLTKLDLSYNQLRKITGLDSLGSTLKELYLVENKIKVIEGLGSFVHLELLELGGNRIR 210
Query: 161 -IIENLDGLTNLEELYLGKNKISRI-DNLASLTKLNILSLQCNRLRTI--ENLEALTN-- 214
I L L +L+ L+LGKNKI I D+L +L +L LSLQ NRL +I E + N
Sbjct: 211 EIGSGLSNLRSLQSLWLGKNKIHSIGDSLHNLRELRKLSLQANRLTSITEEAFKEGCNPY 270
Query: 215 LTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQ----NIAHLTELQEFWINDNQVS 270
L +LYLSENG++TIENL L LD ++N IS I N ++ EL+EFW+ D ++
Sbjct: 271 LVELYLSENGISTIENL-PLHSLHLLDFSFNPISTINEAVINPTNMPELEEFWLTDGNIN 329
Query: 271 DWNTVNVLEN-NKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
DW+ V L+TIY++RNP+ QD YR K+ + P++ QID+
Sbjct: 330 DWSEVKKFCGFANTLRTIYVERNPIEQDKRYRDKVYMNLPFVTQIDS 376
>gi|406701168|gb|EKD04320.1| hypothetical protein A1Q2_01351 [Trichosporon asahii var. asahii
CBS 8904]
Length = 943
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 184/327 (56%), Gaps = 23/327 (7%)
Query: 2 DVETVPNTDEVDNDNLVTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCI 61
+ E P+ ++ DN + + E H + L N ES + + +
Sbjct: 30 EPEDAPSGEQAPTDNFLADYPDDTEELHLQHLRLTN----------ESLPPLDLPRFTEL 79
Query: 62 ERLLLRWNLIKKI--ENIHMLTTLKELELYDNQLTVI---ENLDTLINLEILDLSFNRIR 116
RL LR N + + L L EL+LYDN+L + E + + ++ LDLSFN IR
Sbjct: 80 TRLCLRQNELSSPLPKECLKLGKLDELDLYDNRLGPVVEDEEVKGMPSMTSLDLSFNNIR 139
Query: 117 EIKGLDHLANLEKLYLCSNKISKIEN--VDHLK-KLKVLELGDNKIRIIENLDGLTNLEE 173
I L L ++ LYL NKI IE +D K + LELG N+IR IEN++ LT L+E
Sbjct: 140 HIPNLPSLTKVKVLYLIQNKIKAIEPGVLDWCKDTITSLELGGNRIRTIENIEMLTLLDE 199
Query: 174 LYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLS 233
L+LGKNKI R++NL + L ILS+Q NR+ +E LE L NL +LYLS NGLT IE L +
Sbjct: 200 LWLGKNKIRRLENLNAFANLKILSIQSNRITKMEGLEELKNLEELYLSHNGLTKIEGLEN 259
Query: 234 NEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQV-SDWNTVNVLENNKQLQTIYLDRN 292
N L TLD+ N+I+ I+N++HL +L+EFW + N++ S N L L+T+YL+ N
Sbjct: 260 N--LRTLDIGNNEITAIENVSHLKDLEEFWASYNKIESLANLHEELGGLPNLETVYLEGN 317
Query: 293 PVAQD--PNYRRKIKLVCPWIVQIDAT 317
P ++ YRRK+ L P + QIDAT
Sbjct: 318 PCQRNDMAGYRRKVMLALPQVQQIDAT 344
>gi|237839051|ref|XP_002368823.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|90654515|gb|ABD96037.1| leucine-rich repeat protein 1 [Toxoplasma gondii]
gi|211966487|gb|EEB01683.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
Length = 369
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 180/289 (62%), Gaps = 10/289 (3%)
Query: 39 DEESEAETTE-SKAEDEESKEVC--IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTV 95
D S+A T + S+ E+ ++C ++RL L N I+KIEN+ L+ELELY N++
Sbjct: 53 DPTSDAITYQTSRIHKIENLQICPHLKRLALNANDIEKIENLESTPELEELELYQNRVRK 112
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELG 155
IE L TL +L +LDLSFN++R+I+ L+ L KLYL SNKI IE ++ L +L++LELG
Sbjct: 113 IEGLSTLSHLRVLDLSFNKVRKIENLETAVKLVKLYLSSNKIQVIEGLETLTRLELLELG 172
Query: 156 DNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIEN--LEALT 213
N+IR I+ + LT L+EL+LGKNKI+ + L L L LS+Q NRL + +
Sbjct: 173 SNRIREIQGIATLTELKELWLGKNKITEM-KLPPLLNLQRLSIQSNRLTRWNDSLFSSCP 231
Query: 214 NLTQLYLSENGLTTI--ENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+L +LYLS N LT E + +KL+ LD+ N + ++ +A L EL+E WINDN +S
Sbjct: 232 SLEELYLSHNRLTGAIPEAIGKLKKLKILDLGANAVDDMRAVAQLPELEELWINDNHISS 291
Query: 272 WNTVNVLENNKQLQTIYLDRNPVAQD--PNYRRKIKLVCPWIVQIDATL 318
V L++ L+T+YL+ NP+ + P+YR+ I + P + Q+DA L
Sbjct: 292 LEAVKALKSMDSLRTLYLEGNPIHANLGPSYRQNIVQIFPKLQQLDALL 340
>gi|384248268|gb|EIE21752.1| L domain-like protein [Coccomyxa subellipsoidea C-169]
Length = 329
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 153/267 (57%), Gaps = 12/267 (4%)
Query: 61 IERLLLRWNL---IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIRE 117
++ L LR NL + ++ N LKEL L+DN + I ++ +L+ L+LS+N+I+
Sbjct: 59 LQTLSLRQNLLSDVGQLGNSAFRAVLKELVLHDNHIEEIPEMEDFTSLQRLELSYNQIQS 118
Query: 118 IKGLDHLAN--LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++ L L + L LY+ +N + KIE V L++LELG NKIR + L+GLTNL+EL+
Sbjct: 119 LQPLLSLGSTVLSDLYVANNAVQKIEAVQQFTNLRMLELGSNKIREMTGLEGLTNLQELW 178
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LG+N+I+ I L SLT L LS+Q NRL ++ L+ + L +LYLS NG+ +E L S
Sbjct: 179 LGRNRIAEISGLNSLTALRKLSVQSNRLMSMAGLQHCSQLEELYLSHNGIQRLEGLESLP 238
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNK---QLQTIYLDRN 292
L LDV+ N++S + + LT+L + W+NDN ++ + L +YL N
Sbjct: 239 NLRVLDVSSNQVSDLTGLEALTQLTDLWLNDNAITSLGDLVAAAGGPMGGSLTCLYLSGN 298
Query: 293 PVAQDPN----YRRKIKLVCPWIVQID 315
P A+ YR + + P + Q+D
Sbjct: 299 PAAETAGGHAAYRAAVVRMFPKLQQLD 325
>gi|221502119|gb|EEE27863.1| leucine-rich repeat protein 15, lrc-15, putative [Toxoplasma gondii
VEG]
Length = 369
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/289 (41%), Positives = 179/289 (61%), Gaps = 10/289 (3%)
Query: 39 DEESEAETTE-SKAEDEESKEVC--IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTV 95
D S+A T + S+ E+ ++C ++RL L N I+KIEN+ L+ELELY N++
Sbjct: 53 DPTSDAITYQTSRIHKIENLQICPHLKRLALNANDIEKIENLESTPELEELELYQNRVRK 112
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELG 155
IE L TL +L +LDLSFN++R+I+ L+ L KLYL SNKI IE ++ L +L++LELG
Sbjct: 113 IEGLSTLSHLRVLDLSFNKVRKIENLETAVKLVKLYLSSNKIQVIEGLETLTRLELLELG 172
Query: 156 DNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIEN--LEALT 213
N+IR I+ + LT L+EL+LGKNKI+ + L L L LS+Q NRL + +
Sbjct: 173 SNRIREIQGIATLTELKELWLGKNKITEM-KLPPLLNLQRLSIQSNRLTRWNDSLFSSCP 231
Query: 214 NLTQLYLSENGLTTI--ENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+L +LYLS N LT E + +KL+ LD+ N + ++ +A L EL+E WINDN +S
Sbjct: 232 SLEELYLSHNRLTGAIPEAIGKLKKLKILDLGANAVDDMRAVAQLPELEELWINDNHISS 291
Query: 272 WNTVNVLENNKQLQTIYLDRNPVAQD--PNYRRKIKLVCPWIVQIDATL 318
V L + L+T+YL+ NP+ + P+YR+ I + P + Q+DA L
Sbjct: 292 LEAVKALNSMDSLRTLYLEGNPIHANLGPSYRQNIVQIFPKLQQLDALL 340
>gi|50286283|ref|XP_445570.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524875|emb|CAG58481.1| unnamed protein product [Candida glabrata]
Length = 339
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/267 (45%), Positives = 172/267 (64%), Gaps = 10/267 (3%)
Query: 61 IERLLLRWNLIKKIENIHMLT--TLKELELYDNQLTVIEN-LDTLINLEILDLSFNRIRE 117
++ L +R N I+ I + +L T+++L+ YDN++ I ++ NL+ LDLSFN+I+
Sbjct: 69 LKYLCVRQNFIESISEVDVLPDDTVEDLDFYDNKIKHISKYINKFKNLKNLDLSFNKIKN 128
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII--ENLDGLTNLEELY 175
IK +D L NLE LY NKI IEN+ LKKLK LELG N+I I ++L GL LEE++
Sbjct: 129 IKNIDKLENLENLYFVQNKIEVIENLSTLKKLKNLELGGNRIHEIGEDSLKGLDKLEEIW 188
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LGKN I R+ NL L L ILS+Q NR++ IENLE L NL +LYLS N + IE L N
Sbjct: 189 LGKNHIPRLINLHWLKNLKILSIQSNRIKKIENLEQLENLEELYLSHNFIEKIEGLDKNL 248
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQV--SDWNTVNVLENNKQLQTIYLDRNP 293
KL TLD+ NKI+ I+N+ HLT+L + W++ N++ S + + L + + TIYL+ NP
Sbjct: 249 KLTTLDITSNKITKIENVKHLTKLTDLWLSFNKIDQSFESIGDELRDLPEFDTIYLEGNP 308
Query: 294 VA--QDPNYRRKIKL-VCPWIVQIDAT 317
V +YRRK+ L + P + +IDAT
Sbjct: 309 VQLNNKTSYRRKLMLNLGPSLQKIDAT 335
>gi|307104458|gb|EFN52712.1| hypothetical protein CHLNCDRAFT_56306 [Chlorella variabilis]
Length = 319
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 155/263 (58%), Gaps = 9/263 (3%)
Query: 61 IERLLLRWNLIKKIENIHMLTT---LKELELYDNQLTVIENLDTLINLEILDLSFNRIRE 117
+ RL LR NL+ ++ + L + L+ L+L DNQL + +L +L L++S+N +R
Sbjct: 53 LRRLCLRQNLVSQVAEVEALASAPVLEALDLRDNQLKALPSLAAFTSLRYLEVSYNEVRS 112
Query: 118 IKGLDHLAN--LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
+ L L + L +L++ NKI+ IE+++ L L LELG N+IR +E L L L+EL+
Sbjct: 113 LAPLSSLGSTQLTELFVACNKIAAIESLERLALLHTLELGGNRIRSLEGLSQLGLLQELW 172
Query: 176 LGKNKISRI-DNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
LG+N+I+ + D L+SL L LSLQ NRL ++ L+ T L +LYLS NG+ +E L
Sbjct: 173 LGRNRIAELGDCLSSLHNLRRLSLQSNRLTSMAGLQHCTALEELYLSHNGIEQLEGLDRL 232
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ--LQTIYLDRN 292
L+ LDVA N+I I N+ L +L + W NDNQ+ + V +++ + +YL N
Sbjct: 233 VNLKILDVANNRIQRIGNLGVL-QLTDLWANDNQIGSLDEVEAALKSQRGSMSCVYLRGN 291
Query: 293 PVAQDPNYRRKIKLVCPWIVQID 315
P A +Y+ ++K P + Q+D
Sbjct: 292 PCAAGTDYKLRMKFTLPRLEQLD 314
>gi|401881763|gb|EJT46049.1| hypothetical protein A1Q1_05431 [Trichosporon asahii var. asahii
CBS 2479]
Length = 359
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 134/336 (39%), Positives = 185/336 (55%), Gaps = 32/336 (9%)
Query: 2 DVETVPNTDEVDNDNLVTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCI 61
+ E P+ ++ DN + + E H + L T ES + + +
Sbjct: 30 EPEDAPSGEQAPTDNFLADYPDDTEELHLQHLRL----------TNESLPPLDLPRFTEL 79
Query: 62 ERLLLRWNLIKKI--ENIHMLTTLKELELYDNQL-TVIEN---------LDTLI--NLEI 107
RL LR N + + L L EL+LYDN+L V+E+ D L N
Sbjct: 80 TRLCLRQNELSSPLPKECLKLGKLDELDLYDNRLGPVVEDEEVKGMPSMTDRLFQANPSS 139
Query: 108 LDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN--VDHLK-KLKVLELGDNKIRIIEN 164
LDLSFN IR I L L ++ LYL NKI IE +D K + LELG N+IR IEN
Sbjct: 140 LDLSFNNIRHIPNLPSLTKVKVLYLIQNKIKAIEPGVLDWCKDTITSLELGGNRIRTIEN 199
Query: 165 LDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENG 224
++ LT L+EL+LGKNKI R++NL + L ILS+Q NR+ +E LE L NL +LYLS NG
Sbjct: 200 IEVLTLLDELWLGKNKIRRLENLNAFANLKILSIQSNRITKMEGLEELKNLEELYLSHNG 259
Query: 225 LTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQV-SDWNTVNVLENNKQ 283
LT IE L +N L TLD+ N+I+ I+N++HL +L+EFW + N++ S N L
Sbjct: 260 LTKIEGLENN--LRTLDIGNNEITAIENVSHLKDLEEFWASYNKIESLANLHEELGGLPN 317
Query: 284 LQTIYLDRNPVAQD--PNYRRKIKLVCPWIVQIDAT 317
L+T+YL+ NP ++ YRRK+ L P + QIDAT
Sbjct: 318 LETVYLEGNPCQRNDMAGYRRKVMLALPQVQQIDAT 353
>gi|154332235|ref|XP_001561934.1| protein phosphatase type 1 regulator-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134059255|emb|CAM36954.1| protein phosphatase type 1 regulator-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 418
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 162/288 (56%), Gaps = 37/288 (12%)
Query: 64 LLLRWNLIKKIENI--HMLTTLKELELYDNQLTVIENL--------------------DT 101
L LR NLI ++ H+ L EL+L+DN++ + +
Sbjct: 113 LSLRKNLIHELSAFPQHLAGRLTELDLFDNKIRKVRDFFDSAMVPDPESGSLLKQSVPQA 172
Query: 102 LINLEILDLSFNRIREIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIR 160
+L LDLS+N++R I GL L + L++LYL NKI IE +D L++LELG N+IR
Sbjct: 173 FYSLTKLDLSYNQLRRITGLGSLGSTLKELYLVENKIKVIEGLDSFVHLELLELGGNRIR 232
Query: 161 -IIENLDGLTNLEELYLGKNKISRI-DNLASLTKLNILSLQCNRLRTIENLEAL-----T 213
I L L +L+ L+LGKNKI I D+L SL +L LSLQ NRL +I EA
Sbjct: 233 EIGSGLANLRSLQSLWLGKNKIHSIGDSLHSLRELQKLSLQANRLTSITE-EAFKEGCNP 291
Query: 214 NLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQ----NIAHLTELQEFWINDNQV 269
+L +LYLSENG++TIENL + D+++N I+ I N ++ EL+EFW+ D +
Sbjct: 292 HLVELYLSENGISTIENLPLHSLHLL-DLSFNPIATINETVINPTNMPELEEFWLTDGNI 350
Query: 270 SDWNTVNVLEN-NKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
+DW V L+TIY++RNP+ QD YR K+ + P++ QID+
Sbjct: 351 NDWGEVKKFCGFANTLRTIYVERNPIEQDKRYRDKVYMNLPFVTQIDS 398
>gi|407422541|gb|EKF38917.1| protein phosphatase 1, regulatory subunit, putative [Trypanosoma
cruzi marinkellei]
Length = 402
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/289 (40%), Positives = 174/289 (60%), Gaps = 33/289 (11%)
Query: 60 CIERLLLRWNLIKKIENIH--MLTTLKELELYDNQLTVIENLDTLI-------------- 103
CI L LR NLI ++ + L+EL+L+DN++ + + + I
Sbjct: 98 CIS-LSLRKNLIHELSPFPEDLAARLEELDLFDNKIRKLRDFFSTIRCMGESTLKENVTG 156
Query: 104 ---NLEILDLSFNRIREIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKI 159
+L LDLS+N+IR I GL+ LA+ L +LYL NKI +I+N+D L L++LELG N+I
Sbjct: 157 AFGHLTKLDLSYNQIRNIGGLEPLASTLRELYLVENKIKEIKNLDSLLNLELLELGGNRI 216
Query: 160 R-IIENLDGLTNLEELYLGKNKISRID-NLASLTKLNILSLQCNRLRTIE-----NLEAL 212
R I L LT L++L+LGKNKI+ I +L +L L ILSLQ NRL +IE +A
Sbjct: 217 REIGPGLAKLTKLKQLWLGKNKIASIGTSLQTLASLEILSLQANRLTSIEPDNFLGPDAN 276
Query: 213 TNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQ----NIAHLTELQEFWINDNQ 268
+L +LYLSENGLT I+NL ++ +D ++N IS+I N ++ +L EFW+ D +
Sbjct: 277 PHLRELYLSENGLTCIQNLGHLPMVQIIDFSFNPISVINEDVINPRNMPQLIEFWLTDGK 336
Query: 269 VSDWNTVNVLENNK-QLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
+ W+ + L K L+T+YL+RNP+ +D YR K+ + P++ QID+
Sbjct: 337 IEKWDELGKLIGFKNTLRTVYLERNPIEEDKRYRDKVYMQLPFLEQIDS 385
>gi|71659206|ref|XP_821327.1| protein phosphatase 1, regulatory subunit [Trypanosoma cruzi strain
CL Brener]
gi|70886703|gb|EAN99476.1| protein phosphatase 1, regulatory subunit, putative [Trypanosoma
cruzi]
Length = 402
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 174/289 (60%), Gaps = 33/289 (11%)
Query: 60 CIERLLLRWNLIKKIENIH--MLTTLKELELYDNQL----------------TVIENL-D 100
CI L LR NLI ++ + L+EL+L+DN++ T+ EN+
Sbjct: 98 CIS-LSLRKNLIHELSPFPEDLAARLEELDLFDNKIRKLRDFFSTVRCMGESTLKENVTG 156
Query: 101 TLINLEILDLSFNRIREIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKI 159
+L LDLS+N+IR I GL+ LA+ L +LYL NKI +I+N+D L L++LELG N+I
Sbjct: 157 AFGHLTKLDLSYNQIRNIGGLEPLASTLRELYLVENKIKEIKNLDSLLNLELLELGGNRI 216
Query: 160 R-IIENLDGLTNLEELYLGKNKISRID-NLASLTKLNILSLQCNRLRTIE-----NLEAL 212
R I L LT L++L+LGKNKI+ I +L +L L ILSLQ NRL ++E +A
Sbjct: 217 REIGPGLAKLTKLKQLWLGKNKIASIGTSLQTLVSLEILSLQANRLTSVEPDNFLGPDAN 276
Query: 213 TNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQ----NIAHLTELQEFWINDNQ 268
+L +LYLSENGL I+NL L+ +D ++N IS+I N ++ +L EFW+ D +
Sbjct: 277 PHLRELYLSENGLKCIQNLGHLPMLQLIDFSFNPISVINEDVINPRNMPQLIEFWLTDGK 336
Query: 269 VSDWNTVNVLENNK-QLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
+ W+ + L K L+T+YL+RNP+ +D YR K+ + P++ QID+
Sbjct: 337 IEKWDELGKLSGFKNTLRTVYLERNPIEEDKRYRDKVYMQLPFLEQIDS 385
>gi|71422124|ref|XP_812037.1| protein phosphatase 1, regulatory subunit [Trypanosoma cruzi strain
CL Brener]
gi|70876769|gb|EAN90186.1| protein phosphatase 1, regulatory subunit, putative [Trypanosoma
cruzi]
Length = 402
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 173/289 (59%), Gaps = 33/289 (11%)
Query: 60 CIERLLLRWNLIKKIENIH--MLTTLKELELYDNQLTVIENLDTLI-------------- 103
CI L LR NLI ++ + L+EL+L+DN++ + + + I
Sbjct: 98 CIS-LSLRKNLIHELSPFPEDLAARLEELDLFDNKIRKVRDFFSTIRCMGESTLKENVTG 156
Query: 104 ---NLEILDLSFNRIREIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKI 159
+L LDLS+N+IR I GL+ LA+ L +LYL NKI +I+N+D L L++LELG N+I
Sbjct: 157 AFGHLTKLDLSYNQIRNIGGLEPLASTLRELYLVENKIKEIKNLDSLLNLELLELGGNRI 216
Query: 160 R-IIENLDGLTNLEELYLGKNKISRID-NLASLTKLNILSLQCNRLRTIE-----NLEAL 212
R I L LT L++L+LGKNKI+ I +L +L L ILSLQ NRL +IE +A
Sbjct: 217 REIGPGLAKLTKLKQLWLGKNKIASIGTSLQTLVSLEILSLQANRLTSIEPDNFLGPDAN 276
Query: 213 TNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQ----NIAHLTELQEFWINDNQ 268
+L +LYLSENGL I+NL ++ +D ++N IS+I N ++ +L EFW+ D +
Sbjct: 277 PHLRELYLSENGLKCIQNLGHLPMVQLIDFSFNPISVINEDVINPRNMPQLIEFWLTDGK 336
Query: 269 VSDWNTVNVLENNK-QLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
+ W+ + L K L+T+YL+RNP+ +D YR K+ + P++ QID+
Sbjct: 337 IEKWDELGKLSGFKNTLRTVYLERNPIEEDKRYRDKVYMQLPFLEQIDS 385
>gi|62548870|gb|AAX86874.1| leucine-rich-repeat protein 1 [Plasmodium falciparum]
gi|86277141|gb|ABC87939.1| leucine rich repeat 1 [Plasmodium falciparum]
Length = 246
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 148/215 (68%), Gaps = 6/215 (2%)
Query: 107 ILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLD 166
+LDLSFN+I+ I+ L+ L NLE+LYL SNKISKIEN+ + KKL++LELG NKIR+IEN++
Sbjct: 22 VLDLSFNKIKIIENLETLVNLEELYLSSNKISKIENLQNCKKLRLLELGYNKIRMIENIE 81
Query: 167 GLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTI--ENLEALTNLTQLYLSENG 224
LTNLEEL+LGKNKI +I NL L KL LS+Q NRL I ++++ + + +LY+S N
Sbjct: 82 HLTNLEELWLGKNKIEQI-NLPYLPKLKKLSVQHNRLTDICEKSIKNILCVEELYISYNK 140
Query: 225 LTTIENLLSNEK-LETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
+ I + + K L+ D++YN+I+ I ++L L+E W+N+N + + + L +
Sbjct: 141 INHIIDTFKDLKHLKVFDLSYNEINNISICSYLKSLEELWLNNNNIDNLEMIKKLSTIEN 200
Query: 284 LQTIYLDRNPVAQD--PNYRRKIKLVCPWIVQIDA 316
L+T+YL++N + + NYR+ I + P + Q+DA
Sbjct: 201 LKTLYLEKNKIQDNLKENYRKTIIHILPQLKQLDA 235
>gi|407856961|gb|EKG06787.1| protein phosphatase 1, regulatory subunit, putative [Trypanosoma
cruzi]
Length = 402
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/289 (39%), Positives = 173/289 (59%), Gaps = 33/289 (11%)
Query: 60 CIERLLLRWNLIKKIENIH--MLTTLKELELYDNQLTVIENLDTLI-------------- 103
CI L LR NLI ++ + L+EL+L+DN++ + + + I
Sbjct: 98 CIS-LSLRKNLIHELSPFPEDLAARLEELDLFDNKIRKLRDFFSTIRCMGESTLKENVTG 156
Query: 104 ---NLEILDLSFNRIREIKGLDHLAN-LEKLYLCSNKISKIENVDHLKKLKVLELGDNKI 159
+L LDLS+N+IR I GL+ LA+ L +LYL NKI +I+N+D L L++LELG N+I
Sbjct: 157 AFGHLTKLDLSYNQIRNIGGLEPLASTLRELYLVENKIKEIKNLDSLLNLELLELGGNRI 216
Query: 160 R-IIENLDGLTNLEELYLGKNKISRID-NLASLTKLNILSLQCNRLRTIE-----NLEAL 212
R I L LT L++L+LGKNKI+ I +L +L L ILSLQ NRL +IE +A
Sbjct: 217 REIGPGLAKLTKLKQLWLGKNKIASIGTSLQTLVSLEILSLQANRLTSIEPDNFLGPDAN 276
Query: 213 TNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQ----NIAHLTELQEFWINDNQ 268
+L +LYLSENGL I+NL ++ +D ++N IS+I N ++ +L EFW+ D +
Sbjct: 277 PHLRELYLSENGLKCIQNLGHLPMVQLIDFSFNPISVINEDVINPRNMPQLIEFWLTDGK 336
Query: 269 VSDWNTVNVLENNK-QLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
+ W+ + L K L+T+YL+RNP+ +D YR K+ + P++ QID+
Sbjct: 337 IEKWDELGKLSGFKNTLRTVYLERNPIEEDKRYRDKVYMQLPFLEQIDS 385
>gi|443920967|gb|ELU40787.1| leucine rich repeats (2 copies) domain-containing protein
[Rhizoctonia solani AG-1 IA]
Length = 619
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 149/272 (54%), Gaps = 33/272 (12%)
Query: 61 IERLLLRWNLIKKI--ENIHMLTTLKELELYDNQL-TVIENLDTLINLEILDLSFNRIRE 117
+ RL LR N + I E+I L L+EL+ YDN+L V + LD L++L+ LDLSFN +R
Sbjct: 124 LTRLCLRQNFLTHIGEEDIGSLVKLEELDFYDNKLKGVGDALDGLLDLKTLDLSFNLLRS 183
Query: 118 IK-GLDHLANLEKLYLCSNKISKIENVDHLK-KLKVLELGDNKIRIIENLDGLTNLEELY 175
+ GL+ L +Y NKISKI V L L+ LELG N+IR+ +
Sbjct: 184 VPHGLERHRYLHTIYFVQNKISKISGVSGLSGSLRSLELGGNRIRVRPVW--------VN 235
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
+ KNKI+R+ L +L L +LS+Q NR+ +E LE LTNL + Y+S NGL IE L N
Sbjct: 236 MRKNKITRLQGLETLKSLRVLSIQSNRITKLEGLEELTNLEEFYISHNGLNKIEGLGKNV 295
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWIN----DNQVSDWNTVNVLENN----KQLQTI 287
L A IS N WI+ DNQ++ T+N LE K L TI
Sbjct: 296 SSLFLAGADIFISSSSNCY-------LWIHAQASDNQIA---TLNDLERELGGIKSLSTI 345
Query: 288 YLDRNPV-AQDP-NYRRKIKLVCPWIVQIDAT 317
YL+RNP +DP YRRK+ L P + QIDAT
Sbjct: 346 YLERNPCEKEDPTGYRRKVMLALPQVQQIDAT 377
>gi|340506033|gb|EGR32278.1| serine protease inhibitor, putative [Ichthyophthirius multifiliis]
Length = 593
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 141/210 (67%), Gaps = 5/210 (2%)
Query: 113 NRIREIKGLDHLANL-EKLYLCSNKISK-IENVDHLKKLKVLELGDNKIRIIENLDGLTN 170
NRI ++G+ NL +KL + + ++ IEN+D KL +LELG NKI I+NLD L
Sbjct: 67 NRIEVLEGVSENKNLTQKLKVQKTQQTQVIENLD-FPKLTMLELGSNKIEKIQNLDKLPL 125
Query: 171 LEELYLGKNKISRIDNLASLT-KLNILSLQCNRLRTIE-NLEALTNLTQLYLSENGLTTI 228
L+ELYLGKN+I +I+NL L ++ L+L NR+ I LE LTNLT+LY++EN ++ I
Sbjct: 126 LQELYLGKNRIKQIENLEPLKDSMSTLALTANRIIDISTGLEQLTNLTELYIAENYISQI 185
Query: 229 ENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIY 288
L + L LD++ NKI+ + I L +LQE W+N N++ +++ +N+L N+Q+QT+Y
Sbjct: 186 NGLDNLTNLILLDLSMNKITKLDGINKLQKLQELWLNINKIENFDDLNILSQNQQIQTVY 245
Query: 289 LDRNPVAQDPNYRRKIKLVCPWIVQIDATL 318
L +NPVAQ P+YR+K+ V P I QIDA L
Sbjct: 246 LQQNPVAQFPSYRQKLIEVLPNISQIDAIL 275
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 76 NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSN 135
+ LT L EL + +N ++ I LD L NL +LDLS N+I ++ G++ L L++L+L
Sbjct: 165 GLEQLTNLTELYIAENYISQINGLDNLTNLILLDLSMNKITKLDGINKLQKLQELWL--- 221
Query: 136 KISKIENVDHL 146
I+KIEN D L
Sbjct: 222 NINKIENFDDL 232
>gi|303322865|ref|XP_003071424.1| Leucine Rich Repeat family protein [Coccidioides posadasii C735
delta SOWgp]
gi|240111126|gb|EER29279.1| Leucine Rich Repeat family protein [Coccidioides posadasii C735
delta SOWgp]
Length = 316
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 151/261 (57%), Gaps = 29/261 (11%)
Query: 61 IERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+E+L LR N I ++ L TLK+L+LYDN ++ I+ LD L NL LDLSFN I+ IK
Sbjct: 76 LEKLCLRQNQIPRMSFPDNLGPTLKDLDLYDNLISHIKGLDQLTNLTSLDLSFNNIKHIK 135
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L L LY N+I KIE ++ L KL+ LELG N+IR N+ L+NL+ L L N
Sbjct: 136 NLSKLVQLTDLYFVQNRIQKIEGLEGLTKLRNLELGANRIR---NISHLSNLKILSLPSN 192
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
+++ + L+ LT L L + N + I LE+L NL L +S N
Sbjct: 193 RLTSLSGLSGLTSLEELYVSHNAITHISGLESLNNLHVLDISNN---------------- 236
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV-AQD 297
+IS ++NI+HL+ ++E W ++N+++ ++ V L N ++L+T+Y + NP+ +
Sbjct: 237 ------QISTLENISHLSHIEELWASNNKLASFDEVERELRNKEELKTVYFEGNPLQTRG 290
Query: 298 PN-YRRKIKLVCPWIVQIDAT 317
P YR K++L P I QIDAT
Sbjct: 291 PALYRNKVRLALPQIQQIDAT 311
>gi|334145937|ref|YP_004508864.1| leucine-rich protein [Porphyromonas gingivalis TDC60]
gi|333803091|dbj|BAK24298.1| leucine-rich protein [Porphyromonas gingivalis TDC60]
Length = 1384
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 141/219 (64%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+++L L +N I+K E + L +L EL+L NQ+ +E L+ L +L LDLS+N+IR+ +
Sbjct: 66 ALKKLDLSYNQIRKFEGLDHLASLTELDLSGNQIAKLEGLNALTSLTRLDLSYNQIRKFE 125
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
GLDHLA+L +L L N+I+K+E ++ L L L+L DN+I +E LD LT+L ELYL N
Sbjct: 126 GLDHLASLTELDLSGNQIAKLEGLNALTSLTRLDLSDNQIAKLEGLDSLTSLTELYLSGN 185
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
+I++++ L LT L L L+ N++ +E L+ LT+LT L LS N + +E L S L
Sbjct: 186 QIAKLEGLDHLTSLTRLDLRGNQIAKLEGLDHLTSLTGLNLSGNQIRKLEGLDSLTSLTE 245
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
L ++ N+I+ ++ + LT L E +++ NQ++ +N L
Sbjct: 246 LYLSGNQIAKLEGLNALTSLTELYLSGNQIAKLEGLNAL 284
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/220 (40%), Positives = 139/220 (63%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ RL L +N I+K E + L +L EL+L NQ+ +E L+ L +L LDLS N+I ++
Sbjct: 109 TSLTRLDLSYNQIRKFEGLDHLASLTELDLSGNQIAKLEGLNALTSLTRLDLSDNQIAKL 168
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
+GLD L +L +LYL N+I+K+E +DHL L L+L N+I +E LD LT+L L L
Sbjct: 169 EGLDSLTSLTELYLSGNQIAKLEGLDHLTSLTRLDLRGNQIAKLEGLDHLTSLTGLNLSG 228
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N+I +++ L SLT L L L N++ +E L ALT+LT+LYLS N + +E L + L
Sbjct: 229 NQIRKLEGLDSLTSLTELYLSGNQIAKLEGLNALTSLTELYLSGNQIAKLEGLNALTSLT 288
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
L+++ N+IS ++++A LT L ++DNQ++ +N L
Sbjct: 289 GLNLSGNQISKLESLASLTSLTRLNLSDNQIAKLEGLNAL 328
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 146/220 (66%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ +L L N I K+E+++ LT+L EL+L DNQ+ +E+L +L +L LDLS N+I ++
Sbjct: 373 TSLTQLDLSGNQISKLESLNALTSLTELDLSDNQIATLESLASLTSLTELDLSDNQIAKL 432
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
+GL+ L +L L L N+I+K+E +DHL L L+L N+IR +E LD LT+L +L L
Sbjct: 433 EGLNALTSLTGLDLRGNQIAKLEGLDHLTSLTRLDLRGNQIRKLEGLDSLTSLTQLDLSG 492
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N+IS++++L +LT L L L N++ T+E L ALT+LT+L LS+N + +E+L S L
Sbjct: 493 NQISKLESLNALTSLTELDLSDNQIATLEGLNALTSLTRLDLSDNQIAKLESLASLTSLT 552
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
LD++ N+I+ ++ + LT+LQE ++ N + + + +L
Sbjct: 553 RLDLSDNQIAKLEGLKDLTQLQELDVSGNDIQSVDDIKLL 592
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 133/205 (64%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I K+E ++ LT+L L+L DNQ+ +E LD+L +L L LS N+I +++GLDHL
Sbjct: 138 LSGNQIAKLEGLNALTSLTRLDLSDNQIAKLEGLDSLTSLTELYLSGNQIAKLEGLDHLT 197
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+L +L L N+I+K+E +DHL L L L N+IR +E LD LT+L ELYL N+I++++
Sbjct: 198 SLTRLDLRGNQIAKLEGLDHLTSLTGLNLSGNQIRKLEGLDSLTSLTELYLSGNQIAKLE 257
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L +LT L L L N++ +E L ALT+LT L LS N ++ +E+L S L L+++ N
Sbjct: 258 GLNALTSLTELYLSGNQIAKLEGLNALTSLTGLNLSGNQISKLESLASLTSLTRLNLSDN 317
Query: 246 KISIIQNIAHLTELQEFWINDNQVS 270
+I+ ++ + LT L + NQ++
Sbjct: 318 QIAKLEGLNALTSLTGLDLRGNQIA 342
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 136/226 (60%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ RL L N I K+E + LT+L EL L NQ+ +E LD L +L LDL N+I ++
Sbjct: 153 TSLTRLDLSDNQIAKLEGLDSLTSLTELYLSGNQIAKLEGLDHLTSLTRLDLRGNQIAKL 212
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
+GLDHL +L L L N+I K+E +D L L L L N+I +E L+ LT+L ELYL
Sbjct: 213 EGLDHLTSLTGLNLSGNQIRKLEGLDSLTSLTELYLSGNQIAKLEGLNALTSLTELYLSG 272
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N+I++++ L +LT L L+L N++ +E+L +LT+LT+L LS+N + +E L + L
Sbjct: 273 NQIAKLEGLNALTSLTGLNLSGNQISKLESLASLTSLTRLNLSDNQIAKLEGLNALTSLT 332
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQL 284
LD+ N+I+ ++ + HLT L + NQ+ ++ L + QL
Sbjct: 333 GLDLRGNQIAKLEGLDHLTSLTRLDLRGNQIRKLEGLDSLTSLTQL 378
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 140/220 (63%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ RL L N I K+E ++ LT+L L+L NQ+ +E LD L +L LDL N+IR++
Sbjct: 307 TSLTRLNLSDNQIAKLEGLNALTSLTGLDLRGNQIAKLEGLDHLTSLTRLDLRGNQIRKL 366
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
+GLD L +L +L L N+ISK+E+++ L L L+L DN+I +E+L LT+L EL L
Sbjct: 367 EGLDSLTSLTQLDLSGNQISKLESLNALTSLTELDLSDNQIATLESLASLTSLTELDLSD 426
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N+I++++ L +LT L L L+ N++ +E L+ LT+LT+L L N + +E L S L
Sbjct: 427 NQIAKLEGLNALTSLTGLDLRGNQIAKLEGLDHLTSLTRLDLRGNQIRKLEGLDSLTSLT 486
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
LD++ N+IS ++++ LT L E ++DNQ++ +N L
Sbjct: 487 QLDLSGNQISKLESLNALTSLTELDLSDNQIATLEGLNAL 526
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 132/215 (61%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I K+E + LT+L L+L NQ+ +E LD L +L L+LS N+IR+++GLD
Sbjct: 180 LYLSGNQIAKLEGLDHLTSLTRLDLRGNQIAKLEGLDHLTSLTGLNLSGNQIRKLEGLDS 239
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L +L +LYL N+I+K+E ++ L L L L N+I +E L+ LT+L L L N+IS+
Sbjct: 240 LTSLTELYLSGNQIAKLEGLNALTSLTELYLSGNQIAKLEGLNALTSLTGLNLSGNQISK 299
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+++LASLT L L+L N++ +E L ALT+LT L L N + +E L L LD+
Sbjct: 300 LESLASLTSLTRLNLSDNQIAKLEGLNALTSLTGLDLRGNQIAKLEGLDHLTSLTRLDLR 359
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
N+I ++ + LT L + ++ NQ+S ++N L
Sbjct: 360 GNQIRKLEGLDSLTSLTQLDLSGNQISKLESLNAL 394
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 137/213 (64%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I+K+E + LT+L EL L NQ+ +E L+ L +L L LS N+I +++GL+ L
Sbjct: 226 LSGNQIRKLEGLDSLTSLTELYLSGNQIAKLEGLNALTSLTELYLSGNQIAKLEGLNALT 285
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+L L L N+ISK+E++ L L L L DN+I +E L+ LT+L L L N+I++++
Sbjct: 286 SLTGLNLSGNQISKLESLASLTSLTRLNLSDNQIAKLEGLNALTSLTGLDLRGNQIAKLE 345
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L LT L L L+ N++R +E L++LT+LTQL LS N ++ +E+L + L LD++ N
Sbjct: 346 GLDHLTSLTRLDLRGNQIRKLEGLDSLTSLTQLDLSGNQISKLESLNALTSLTELDLSDN 405
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
+I+ ++++A LT L E ++DNQ++ +N L
Sbjct: 406 QIATLESLASLTSLTELDLSDNQIAKLEGLNAL 438
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 140/221 (63%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I K+E ++ LT+L L L NQ++ +E+L +L +L L+LS N+I +++GL+
Sbjct: 268 LYLSGNQIAKLEGLNALTSLTGLNLSGNQISKLESLASLTSLTRLNLSDNQIAKLEGLNA 327
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L +L L L N+I+K+E +DHL L L+L N+IR +E LD LT+L +L L N+IS+
Sbjct: 328 LTSLTGLDLRGNQIAKLEGLDHLTSLTRLDLRGNQIRKLEGLDSLTSLTQLDLSGNQISK 387
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+++L +LT L L L N++ T+E+L +LT+LT+L LS+N + +E L + L LD+
Sbjct: 388 LESLNALTSLTELDLSDNQIATLESLASLTSLTELDLSDNQIAKLEGLNALTSLTGLDLR 447
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQL 284
N+I+ ++ + HLT L + NQ+ ++ L + QL
Sbjct: 448 GNQIAKLEGLDHLTSLTRLDLRGNQIRKLEGLDSLTSLTQL 488
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 156/255 (61%), Gaps = 7/255 (2%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ RL LR N I+K+E + LT+L +L+L NQ++ +E+L+ L +L LDLS N+I +
Sbjct: 351 TSLTRLDLRGNQIRKLEGLDSLTSLTQLDLSGNQISKLESLNALTSLTELDLSDNQIATL 410
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
+ L L +L +L L N+I+K+E ++ L L L+L N+I +E LD LT+L L L
Sbjct: 411 ESLASLTSLTELDLSDNQIAKLEGLNALTSLTGLDLRGNQIAKLEGLDHLTSLTRLDLRG 470
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N+I +++ L SLT L L L N++ +E+L ALT+LT+L LS+N + T+E L + L
Sbjct: 471 NQIRKLEGLDSLTSLTQLDLSGNQISKLESLNALTSLTELDLSDNQIATLEGLNALTSLT 530
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDP 298
LD++ N+I+ ++++A LT L ++DNQ++ + L++ QLQ + + N +
Sbjct: 531 RLDLSDNQIAKLESLASLTSLTRLDLSDNQIA---KLEGLKDLTQLQELDVSGNDIQSVD 587
Query: 299 NYRRKIKLVCPWIVQ 313
+ IKL+ P + Q
Sbjct: 588 D----IKLLAPILEQ 598
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 130/213 (61%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I K+E++ LT+L L L DNQ+ +E L+ L +L LDL N+I +++GLDHL
Sbjct: 292 LSGNQISKLESLASLTSLTRLNLSDNQIAKLEGLNALTSLTGLDLRGNQIAKLEGLDHLT 351
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+L +L L N+I K+E +D L L L+L N+I +E+L+ LT+L EL L N+I+ ++
Sbjct: 352 SLTRLDLRGNQIRKLEGLDSLTSLTQLDLSGNQISKLESLNALTSLTELDLSDNQIATLE 411
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
+LASLT L L L N++ +E L ALT+LT L L N + +E L L LD+ N
Sbjct: 412 SLASLTSLTELDLSDNQIAKLEGLNALTSLTGLDLRGNQIAKLEGLDHLTSLTRLDLRGN 471
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
+I ++ + LT L + ++ NQ+S ++N L
Sbjct: 472 QIRKLEGLDSLTSLTQLDLSGNQISKLESLNAL 504
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 129/207 (62%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I K+E ++ LT+L EL L NQ+ +E L+ L +L L+LS N+I +++ L
Sbjct: 246 LYLSGNQIAKLEGLNALTSLTELYLSGNQIAKLEGLNALTSLTGLNLSGNQISKLESLAS 305
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L +L +L L N+I+K+E ++ L L L+L N+I +E LD LT+L L L N+I +
Sbjct: 306 LTSLTRLNLSDNQIAKLEGLNALTSLTGLDLRGNQIAKLEGLDHLTSLTRLDLRGNQIRK 365
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
++ L SLT L L L N++ +E+L ALT+LT+L LS+N + T+E+L S L LD++
Sbjct: 366 LEGLDSLTSLTQLDLSGNQISKLESLNALTSLTELDLSDNQIATLESLASLTSLTELDLS 425
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVS 270
N+I+ ++ + LT L + NQ++
Sbjct: 426 DNQIAKLEGLNALTSLTGLDLRGNQIA 452
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%)
Query: 187 LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK 246
L L L L N++R E L+ L +LT+L LS N + +E L + L LD++YN+
Sbjct: 61 LVDFPALKKLDLSYNQIRKFEGLDHLASLTELDLSGNQIAKLEGLNALTSLTRLDLSYNQ 120
Query: 247 ISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
I + + HL L E ++ NQ++ +N L
Sbjct: 121 IRKFEGLDHLASLTELDLSGNQIAKLEGLNAL 152
>gi|312066674|ref|XP_003136382.1| leucine Rich Repeat family protein [Loa loa]
gi|307768446|gb|EFO27680.1| leucine Rich Repeat family protein [Loa loa]
Length = 267
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 142/235 (60%), Gaps = 13/235 (5%)
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENV------------ 143
+E L+ N++ LDL+ +RI++I+G D L ++E L L N I KIEN+
Sbjct: 24 VEFLEVDQNVKELDLTRHRIKKIEGFDFLHSIEYLCLRWNLIKKIENLHMLITLTELDLY 83
Query: 144 -DHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+ L +L+ LELGDN+I+ IENL ++ L+LG N+I I+NL L + +LSL N
Sbjct: 84 DNQLTELEYLELGDNRIKKIENLSQNFKIKRLFLGANQIVDIENLEMLKNIEVLSLPANA 143
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
++ I+ L+ LT L +LYLS+NG+ I L SN LE LD+ YN++ I NI HL +L +F
Sbjct: 144 IQEIKGLDKLTTLRELYLSQNGIEYIVGLESNTNLEILDLNYNRLRSISNIHHLQKLTDF 203
Query: 263 WINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDAT 317
W NQ++ ++ L L+ +YL+ NP ++ NYR K+ + P I ++DAT
Sbjct: 204 WAKKNQLNKITDLDELAQLPNLKLVYLEMNPFSECTNYRGKVIRMLPQIEKLDAT 258
>gi|392967569|ref|ZP_10332986.1| Internalin-A [Fibrisoma limi BUZ 3]
gi|387843701|emb|CCH55038.1| Internalin-A [Fibrisoma limi BUZ 3]
Length = 1023
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 151/241 (62%), Gaps = 3/241 (1%)
Query: 54 EESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFN 113
E S+ V + L LR N I++I+ + L L EL L +N+++ I+ L++L L L LS N
Sbjct: 34 EISELVWLTTLSLRNNQIREIKGLASLNQLTELSLRNNRISEIKGLESLTQLTKLSLSDN 93
Query: 114 RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEE 173
RI EIKGL+ L L +LYL N+IS+I+ ++ L +L L L DN+I I+ L+ LT L
Sbjct: 94 RISEIKGLESLNQLTELYLLDNQISEIKGLEPLTQLTTLYLSDNQISEIKGLEPLTQLTT 153
Query: 174 LYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLS 233
L L N+IS I L LT+L L+L N++R I+ LE+LT LT LYLS N ++ I+ L
Sbjct: 154 LNLSDNQISEIKGLEPLTQLTTLNLSYNQIREIKGLESLTQLTTLYLSYNQISEIKGLEP 213
Query: 234 NEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNP 293
+L TL ++YN+IS I+ + LT+L +++DNQ+ + + LE+ QL T+YL N
Sbjct: 214 LTQLTTLYLSYNQISEIKGLESLTQLTTLYLSDNQIRE---IKGLESLTQLTTLYLSDNQ 270
Query: 294 V 294
+
Sbjct: 271 I 271
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 133/225 (59%), Gaps = 3/225 (1%)
Query: 70 LIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEK 129
L++ I L L L L +NQ+ I+ L +L L L L NRI EIKGL+ L L K
Sbjct: 28 LVEIPPEISELVWLTTLSLRNNQIREIKGLASLNQLTELSLRNNRISEIKGLESLTQLTK 87
Query: 130 LYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLAS 189
L L N+IS+I+ ++ L +L L L DN+I I+ L+ LT L LYL N+IS I L
Sbjct: 88 LSLSDNRISEIKGLESLNQLTELYLLDNQISEIKGLEPLTQLTTLYLSDNQISEIKGLEP 147
Query: 190 LTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISI 249
LT+L L+L N++ I+ LE LT LT L LS N + I+ L S +L TL ++YN+IS
Sbjct: 148 LTQLTTLNLSDNQISEIKGLEPLTQLTTLNLSYNQIREIKGLESLTQLTTLYLSYNQISE 207
Query: 250 IQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
I+ + LT+L +++ NQ+S+ + LE+ QL T+YL N +
Sbjct: 208 IKGLEPLTQLTTLYLSYNQISE---IKGLESLTQLTTLYLSDNQI 249
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 127/214 (59%), Gaps = 7/214 (3%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I +I+ + L L EL L DNQ++ I+ L+ L L L LS N+I EIKGL+ L L
Sbjct: 93 NRISEIKGLESLNQLTELYLLDNQISEIKGLEPLTQLTTLYLSDNQISEIKGLEPLTQLT 152
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
L L N+IS+I+ ++ L +L L L N+IR I+ L+ LT L LYL N+IS I L
Sbjct: 153 TLNLSDNQISEIKGLEPLTQLTTLNLSYNQIREIKGLESLTQLTTLYLSYNQISEIKGLE 212
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT+L L L N++ I+ LE+LT LT LYLS+N + I+ L S +L TL ++ N+I
Sbjct: 213 PLTQLTTLYLSYNQISEIKGLESLTQLTTLYLSDNQIREIKGLESLTQLTTLYLSDNQIR 272
Query: 249 IIQN--IAHLTELQEFWINDN-----QVSDWNTV 275
I+ IA L +++ + +N Q+SD+ V
Sbjct: 273 EIKGLTIAQLERMKKLDLTNNPIKGVQLSDFADV 306
>gi|449017635|dbj|BAM81037.1| similar to protein phosphatase 1, regulatory subunit
[Cyanidioschyzon merolae strain 10D]
Length = 360
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 179/328 (54%), Gaps = 18/328 (5%)
Query: 7 PNTDEVDNDNLVTLN--VEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIERL 64
P+ D V + + L EA G + NP E +A + + RL
Sbjct: 9 PDEDGVVDISYSGLGEIAEAYRLPCGTDAAFSNPFLEFQATNCRISRIQNLDRCTSLRRL 68
Query: 65 LLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLD-- 122
+LR NLI ++ + L+ L+E++LY N + I L+ L+ LDLSFNRI + GL+
Sbjct: 69 VLRQNLITELRGLETLSELEEIDLYLNHIREISGLEHKPKLKRLDLSFNRIHSMAGLERF 128
Query: 123 HLANLEKLYLCSNKISKIENVD--HLKKLKVLELGDNKIRIIEN--LDGLTNLEELYLGK 178
HL LE+LYL N+I +I + +L +L++LELG N+IR + + + +LEEL+LG+
Sbjct: 129 HLPALEELYLVQNRIKEIAGLQAHNLPQLRLLELGSNRIRTLGDNLFEVGGSLEELWLGR 188
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIEN-LEALT-NLTQLYLSENGLTTIENLLSNEK 236
NKI ++ +L +L LSLQ NRL + + LE +L +LYLS NG++ +
Sbjct: 189 NKIVQLPSLHCFRRLKRLSLQSNRLLALGSALEYCRDSLEELYLSHNGISALNGTEMLRN 248
Query: 237 LETLDVAYNKISIIQNIAHLTE-LQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
L+ LD+ N+I+ + ++ + L+E W+NDN++ + L + +L+T+YL+ NP+A
Sbjct: 249 LKLLDLGCNRIARLDDLLDDLQNLEELWLNDNKIDSIEQLRHLSAHAKLRTLYLEGNPLA 308
Query: 296 -----QDPN--YRRKIKLVCPWIVQIDA 316
Q N YR + V P + Q+DA
Sbjct: 309 ERLQTQHGNKWYRALVLRVLPMLTQLDA 336
>gi|332666302|ref|YP_004449090.1| adenylate cyclase [Haliscomenobacter hydrossis DSM 1100]
gi|332335116|gb|AEE52217.1| Adenylate cyclase [Haliscomenobacter hydrossis DSM 1100]
Length = 1448
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 147/238 (61%), Gaps = 3/238 (1%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ + L L N I +I+N+ L L+ L+ NQ+ I NLD L L+ LD+ N+I EI
Sbjct: 495 IQLRSLSLWGNQISEIKNLDKLAQLQSLDFDSNQIREISNLDKLTQLQSLDIRRNQISEI 554
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
K LD L L+ L++ N+IS+I+N+D L +L+ L L N+I I NLD LT L LYLG
Sbjct: 555 KNLDKLTQLQSLFIMDNQISEIKNLDKLTQLQSLSLDSNQINKINNLDKLTQLRLLYLGN 614
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N+IS I+NL LT+L L ++ N++ I NL+ LT L LYL N ++ I NL +L+
Sbjct: 615 NQISEINNLDKLTQLQSLYIENNQISEINNLDKLTQLQSLYLGNNQISEINNLDKLTQLQ 674
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ 296
+L + N+IS I N+ LT+LQ ++ +NQ+S+ N ++ L QLQ++ D N +++
Sbjct: 675 SLYLGNNQISEINNLDKLTQLQSLYLGNNQISEINNLDKL---TQLQSLDFDSNQISE 729
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/234 (42%), Positives = 145/234 (61%), Gaps = 3/234 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L +R N I +I+N+ LT L+ L + DNQ++ I+NLD L L+ L L N+I +I
Sbjct: 541 LQSLDIRRNQISEIKNLDKLTQLQSLFIMDNQISEIKNLDKLTQLQSLSLDSNQINKINN 600
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L L LYL +N+IS+I N+D L +L+ L + +N+I I NLD LT L+ LYLG N+
Sbjct: 601 LDKLTQLRLLYLGNNQISEINNLDKLTQLQSLYIENNQISEINNLDKLTQLQSLYLGNNQ 660
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS I+NL LT+L L L N++ I NL+ LT L LYL N ++ I NL +L++L
Sbjct: 661 ISEINNLDKLTQLQSLYLGNNQISEINNLDKLTQLQSLYLGNNQISEINNLDKLTQLQSL 720
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
D N+IS I N+ + T+LQ + DNQ+S+ + + N LQ I L RN +
Sbjct: 721 DFDSNQISEINNLENFTQLQFLSLGDNQISE---IKKIAANSFLQHIDLSRNQI 771
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 146/226 (64%), Gaps = 3/226 (1%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I +I+N+ LT L+ L+L +NQ++ I+N D L L+ LDL N+I EIK LD L L+
Sbjct: 373 NQISEIKNLDKLTQLQSLDLGNNQISEIKNFDKLTQLQSLDLGINQISEIKNLDKLTQLQ 432
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
L L SN+IS+I+N+D L +L+ L+LG N+I I+NL+ LT L+ L L N+IS I+NL
Sbjct: 433 SLDLGSNQISEIKNLDKLTQLQSLDLGINQISEIKNLNKLTQLQSLDLRNNQISEINNLI 492
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
+L +L LSL N++ I+NL+ L L L N + I NL +L++LD+ N+IS
Sbjct: 493 TLIQLRSLSLWGNQISEIKNLDKLAQLQSLDFDSNQIREISNLDKLTQLQSLDIRRNQIS 552
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
I+N+ LT+LQ +I DNQ+S+ ++ L QLQ++ LD N +
Sbjct: 553 EIKNLDKLTQLQSLFIMDNQISEIKNLDKL---TQLQSLSLDSNQI 595
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 151/236 (63%), Gaps = 3/236 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N I +I N+ L L+ L L+ NQ++ I+NLD L L+ LD N+IREI
Sbjct: 475 LQSLDLRNNQISEINNLITLIQLRSLSLWGNQISEIKNLDKLAQLQSLDFDSNQIREISN 534
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L L+ L + N+IS+I+N+D L +L+ L + DN+I I+NLD LT L+ L L N+
Sbjct: 535 LDKLTQLQSLDIRRNQISEIKNLDKLTQLQSLFIMDNQISEIKNLDKLTQLQSLSLDSNQ 594
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NL LT+L +L L N++ I NL+ LT L LY+ N ++ I NL +L++L
Sbjct: 595 INKINNLDKLTQLRLLYLGNNQISEINNLDKLTQLQSLYIENNQISEINNLDKLTQLQSL 654
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ 296
+ N+IS I N+ LT+LQ ++ +NQ+S+ N ++ L QLQ++YL N +++
Sbjct: 655 YLGNNQISEINNLDKLTQLQSLYLGNNQISEINNLDKL---TQLQSLYLGNNQISE 707
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 151/236 (63%), Gaps = 3/236 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N I +I+N++ LT L+ L+L +NQ++ I NL TLI L L L N+I EIK
Sbjct: 453 LQSLDLGINQISEIKNLNKLTQLQSLDLRNNQISEINNLITLIQLRSLSLWGNQISEIKN 512
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD LA L+ L SN+I +I N+D L +L+ L++ N+I I+NLD LT L+ L++ N+
Sbjct: 513 LDKLAQLQSLDFDSNQIREISNLDKLTQLQSLDIRRNQISEIKNLDKLTQLQSLFIMDNQ 572
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS I NL LT+L LSL N++ I NL+ LT L LYL N ++ I NL +L++L
Sbjct: 573 ISEIKNLDKLTQLQSLSLDSNQINKINNLDKLTQLRLLYLGNNQISEINNLDKLTQLQSL 632
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ 296
+ N+IS I N+ LT+LQ ++ +NQ+S+ N ++ L QLQ++YL N +++
Sbjct: 633 YIENNQISEINNLDKLTQLQSLYLGNNQISEINNLDKL---TQLQSLYLGNNQISE 685
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 144/236 (61%), Gaps = 3/236 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N I +I+N+ LT L+ L+L NQ++ I+NL+ L L+ LDL N+I EI
Sbjct: 431 LQSLDLGSNQISEIKNLDKLTQLQSLDLGINQISEIKNLNKLTQLQSLDLRNNQISEINN 490
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N+IS+I+N+D L +L+ L+ N+IR I NLD LT L+ L + +N+
Sbjct: 491 LITLIQLRSLSLWGNQISEIKNLDKLAQLQSLDFDSNQIREISNLDKLTQLQSLDIRRNQ 550
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS I NL LT+L L + N++ I+NL+ LT L L L N + I NL +L L
Sbjct: 551 ISEIKNLDKLTQLQSLFIMDNQISEIKNLDKLTQLQSLSLDSNQINKINNLDKLTQLRLL 610
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ 296
+ N+IS I N+ LT+LQ +I +NQ+S+ N ++ L QLQ++YL N +++
Sbjct: 611 YLGNNQISEINNLDKLTQLQSLYIENNQISEINNLDKL---TQLQSLYLGNNQISE 663
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 132/217 (60%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L + N I +I+N+ LT L+ L L NQ+ I NLD L L +L L N+I EI
Sbjct: 563 LQSLFIMDNQISEIKNLDKLTQLQSLSLDSNQINKINNLDKLTQLRLLYLGNNQISEINN 622
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L L+ LY+ +N+IS+I N+D L +L+ L LG+N+I I NLD LT L+ LYLG N+
Sbjct: 623 LDKLTQLQSLYIENNQISEINNLDKLTQLQSLYLGNNQISEINNLDKLTQLQSLYLGNNQ 682
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS I+NL LT+L L L N++ I NL+ LT L L N ++ I NL + +L+ L
Sbjct: 683 ISEINNLDKLTQLQSLYLGNNQISEINNLDKLTQLQSLDFDSNQISEINNLENFTQLQFL 742
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV 277
+ N+IS I+ IA + LQ ++ NQ+ D T ++
Sbjct: 743 SLGDNQISEIKKIAANSFLQHIDLSRNQIKDLITFSL 779
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/228 (40%), Positives = 139/228 (60%), Gaps = 3/228 (1%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I +I+N LT L+ L+L NQ++ I+NLD L L+ LDL N+I EIK LD L L+
Sbjct: 395 NQISEIKNFDKLTQLQSLDLGINQISEIKNLDKLTQLQSLDLGSNQISEIKNLDKLTQLQ 454
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
L L N+IS+I+N++ L +L+ L+L +N+I I NL L L L L N+IS I NL
Sbjct: 455 SLDLGINQISEIKNLNKLTQLQSLDLRNNQISEINNLITLIQLRSLSLWGNQISEIKNLD 514
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
L +L L N++R I NL+ LT L L + N ++ I+NL +L++L + N+IS
Sbjct: 515 KLAQLQSLDFDSNQIREISNLDKLTQLQSLDIRRNQISEIKNLDKLTQLQSLFIMDNQIS 574
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ 296
I+N+ LT+LQ ++ NQ+ N +N L+ QL+ +YL N +++
Sbjct: 575 EIKNLDKLTQLQSLSLDSNQI---NKINNLDKLTQLRLLYLGNNQISE 619
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 140/235 (59%), Gaps = 2/235 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N I KI N+ LT L+ L L +NQ++ I NLD L L+ L + N+I EI
Sbjct: 585 LQSLSLDSNQINKINNLDKLTQLRLLYLGNNQISEINNLDKLTQLQSLYIENNQISEINN 644
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
LD L L+ LYL +N+IS+I N+D L +L+ L LG+N+I I NLD LT L+ LYLG N+
Sbjct: 645 LDKLTQLQSLYLGNNQISEINNLDKLTQLQSLYLGNNQISEINNLDKLTQLQSLYLGNNQ 704
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS I+NL LT+L L N++ I NLE T L L L +N ++ I+ + +N L+ +
Sbjct: 705 ISEINNLDKLTQLQSLDFDSNQISEINNLENFTQLQFLSLGDNQISEIKKIAANSFLQHI 764
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
D++ N+I + + T L I +NQ+ D+ ++L+ +K L + NPV
Sbjct: 765 DLSRNQIKDLITFSLSTYLLSLDIGENQL-DYLDEHLLD-HKYLLGLRFANNPVV 817
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 143/244 (58%), Gaps = 3/244 (1%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N+ ++ + L LK L L L I +L T L LDLS N+I EIK LD L L+
Sbjct: 329 NVFSDLDGLDNLKNLKRLYLDCLDLKEIPSLVTFKQLAHLDLSNNQISEIKNLDKLTQLQ 388
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
L L +N+IS+I+N D L +L+ L+LG N+I I+NLD LT L+ L LG N+IS I NL
Sbjct: 389 SLDLGNNQISEIKNFDKLTQLQSLDLGINQISEIKNLDKLTQLQSLDLGSNQISEIKNLD 448
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT+L L L N++ I+NL LT L L L N ++ I NL++ +L +L + N+IS
Sbjct: 449 KLTQLQSLDLGINQISEIKNLNKLTQLQSLDLRNNQISEINNLITLIQLRSLSLWGNQIS 508
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVC 308
I+N+ L +LQ + NQ+ + + ++ L QLQ++ + RN +++ N + +L
Sbjct: 509 EIKNLDKLAQLQSLDFDSNQIREISNLDKL---TQLQSLDIRRNQISEIKNLDKLTQLQS 565
Query: 309 PWIV 312
+I+
Sbjct: 566 LFIM 569
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 107/205 (52%), Gaps = 10/205 (4%)
Query: 98 NLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
N + LI L+ +DL N I EI L+H LE L+L NK+ + V H+K LK+L LG+
Sbjct: 249 NWNNLIKLKTIDLQGNFILEIPSLEHYVALEVLFLGQNKLKHLGGVTHVKSLKILTLGNL 308
Query: 158 KI---RIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTN 214
K I + G +N S +D L +L L L L C L+ I +L
Sbjct: 309 KHLSDYIFQRSFGFNYKHP----QNVFSDLDGLDNLKNLKRLYLDCLDLKEIPSLVTFKQ 364
Query: 215 LTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L L LS N ++ I+NL +L++LD+ N+IS I+N LT+LQ + NQ+S+
Sbjct: 365 LAHLDLSNNQISEIKNLDKLTQLQSLDLGNNQISEIKNFDKLTQLQSLDLGINQISEIKN 424
Query: 275 VNVLENNKQLQTIYLDRNPVAQDPN 299
++ L QLQ++ L N +++ N
Sbjct: 425 LDKL---TQLQSLDLGSNQISEIKN 446
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 128/278 (46%), Gaps = 63/278 (22%)
Query: 82 TLKELELYDNQLTVIENLDTLINLEILDLSFNRIR----------------------EIK 119
+L+ L++ N L + +L+ NL+IL+ S N ++ E+
Sbjct: 150 SLQHLDISHNNLRALASLEIFSNLQILNASINFLQHTQDFPLLKKLKELYLGGNFLEEVD 209
Query: 120 GLDHLANLEKLYLC-----------------SNKISKIENVDHLKKLKVLELGDNKIRII 162
GL+ L LEK+ L SN + N ++L KLK ++L N I I
Sbjct: 210 GLNELIALEKISLGFLGLEIKVFDENRTRSNSNFLFNWPNWNNLIKLKTIDLQGNFILEI 269
Query: 163 ENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSL---------------------QCN 201
+L+ LE L+LG+NK+ + + + L IL+L N
Sbjct: 270 PSLEHYVALEVLFLGQNKLKHLGGVTHVKSLKILTLGNLKHLSDYIFQRSFGFNYKHPQN 329
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ L+ L NL +LYL L I +L++ ++L LD++ N+IS I+N+ LT+LQ
Sbjct: 330 VFSDLDGLDNLKNLKRLYLDCLDLKEIPSLVTFKQLAHLDLSNNQISEIKNLDKLTQLQS 389
Query: 262 FWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPN 299
+ +NQ+S+ + L QLQ++ L N +++ N
Sbjct: 390 LDLGNNQISEIKNFDKL---TQLQSLDLGINQISEIKN 424
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 31/248 (12%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENL--DTLINLEILDLSFNRIREIKGLDH 123
L + IK +I L L+ L L N+L + L + ++L+ LD+S N +R + L+
Sbjct: 110 LSYAQIKNHHSIFDLKHLQVLRLSGNRLNDLSFLPDEPYLSLQHLDISHNNLRALASLEI 169
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------ 177
+NL+ L N + ++ LKKLK L LG N + ++ L+ L LE++ LG
Sbjct: 170 FSNLQILNASINFLQHTQDFPLLKKLKELYLGGNFLEEVDGLNELIALEKISLGFLGLEI 229
Query: 178 -----------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
N + N +L KL + LQ N + I +LE L L+L +N L
Sbjct: 230 KVFDENRTRSNSNFLFNWPNWNNLIKLKTIDLQGNFILEIPSLEHYVALEVLFLGQNKLK 289
Query: 227 TIENLLSNEKLETLDVAYNKISIIQNIAHLTEL---QEFWINDNQVSD-WNTVNVLENNK 282
+ + + L KI + N+ HL++ + F N + ++ ++ L+N K
Sbjct: 290 HLGGVTHVKSL--------KILTLGNLKHLSDYIFQRSFGFNYKHPQNVFSDLDGLDNLK 341
Query: 283 QLQTIYLD 290
L+ +YLD
Sbjct: 342 NLKRLYLD 349
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 25/223 (11%)
Query: 78 HMLTTLKELE------LYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLY 131
H+ T L ELE L +N +T + L NL++LDLS+ +I+ + L +L+ L
Sbjct: 72 HLDTRLAELENLEALTLAENPITACQLASILPNLKVLDLSYAQIKNHHSIFDLKHLQVLR 131
Query: 132 LCSNKISKIENV--DHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLAS 189
L N+++ + + + L+ L++ N +R + +L+ +NL+ L N + +
Sbjct: 132 LSGNRLNDLSFLPDEPYLSLQHLDISHNNLRALASLEIFSNLQILNASINFLQHTQDFPL 191
Query: 190 LTKLNILSLQCNRLRTIENLEALTNLTQLYLS----------ENGLTTIENLLSNE---- 235
L KL L L N L ++ L L L ++ L EN + N L N
Sbjct: 192 LKKLKELYLGGNFLEEVDGLNELIALEKISLGFLGLEIKVFDENRTRSNSNFLFNWPNWN 251
Query: 236 ---KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV 275
KL+T+D+ N I I ++ H L+ ++ N++ V
Sbjct: 252 NLIKLKTIDLQGNFILEIPSLEHYVALEVLFLGQNKLKHLGGV 294
>gi|156351296|ref|XP_001622447.1| predicted protein [Nematostella vectensis]
gi|156208991|gb|EDO30347.1| predicted protein [Nematostella vectensis]
Length = 181
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 114/176 (64%), Gaps = 5/176 (2%)
Query: 149 LKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLN-----ILSLQCNRL 203
L+ L L N+I+ +ENL+ LT+LEEL N+IS+I+NL L L+ + Q NR+
Sbjct: 5 LQSLCLRRNEIKKLENLETLTSLEELDFYDNQISKIENLDRLVNLSCHHVFLFVFQSNRI 64
Query: 204 RTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFW 263
++ LE L +L +LY+S NG+ I+ L S KL TLD+A N+I I N+ HL L+EFW
Sbjct: 65 VELKGLEHLDSLEELYISHNGIEEIKGLESLAKLNTLDLASNRIKRISNVGHLLNLEEFW 124
Query: 264 INDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDATLA 319
NDNQ+ W ++ L +L T+YL+RNP+++D YRRK+KL P + QIDATL
Sbjct: 125 FNDNQLEHWEDLDELAKCPKLHTVYLERNPLSRDTAYRRKVKLALPALKQIDATLC 180
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 96/151 (63%), Gaps = 8/151 (5%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLE-----ILDLSFNRI 115
++ L LR N IKK+EN+ LT+L+EL+ YDNQ++ IENLD L+NL + NRI
Sbjct: 5 LQSLCLRRNEIKKLENLETLTSLEELDFYDNQISKIENLDRLVNLSCHHVFLFVFQSNRI 64
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
E+KGL+HL +LE+LY+ N I +I+ ++ L KL L+L N+I+ I N+ L NLEE +
Sbjct: 65 VELKGLEHLDSLEELYISHNGIEEIKGLESLAKLNTLDLASNRIKRISNVGHLLNLEEFW 124
Query: 176 LGKNKISR---IDNLASLTKLNILSLQCNRL 203
N++ +D LA KL+ + L+ N L
Sbjct: 125 FNDNQLEHWEDLDELAKCPKLHTVYLERNPL 155
>gi|258565847|ref|XP_002583668.1| protein phosphatases PP1 regulatory subunit sds22 [Uncinocarpus
reesii 1704]
gi|237907369|gb|EEP81770.1| protein phosphatases PP1 regulatory subunit sds22 [Uncinocarpus
reesii 1704]
Length = 622
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/239 (39%), Positives = 139/239 (58%), Gaps = 28/239 (11%)
Query: 82 TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIE 141
TLKEL+LYDN ++ I+ LD L NL LDLSFN I+ IK + L NL LY N+I +IE
Sbjct: 97 TLKELDLYDNLISHIKGLDQLTNLTSLDLSFNNIKHIKNISTLVNLTDLYFVQNRIQRIE 156
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++ L KL+ LELG N+IR N+ L+NL+ L L N+++ + L+ LT L L + N
Sbjct: 157 GLEGLAKLRNLELGANRIR---NISHLSNLKILSLPSNRLTSLSGLSGLTNLEELYVSHN 213
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
+ I LE+L NL L +S N ++ +EN I+HLT ++E
Sbjct: 214 AITHISGLESLANLHVLDISNNQISKLEN----------------------ISHLTHIEE 251
Query: 262 FWINDNQVSDWNTVNV-LENNKQLQTIYLDRNPVA-QDPN-YRRKIKLVCPWIVQIDAT 317
W ++N++S + V L + ++L+T+Y + NP+ + P YR K++L P I QIDAT
Sbjct: 252 VWASNNKLSSFEEVERELRDKEELKTVYFEGNPLQLKAPALYRNKVRLALPHIQQIDAT 310
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 72/117 (61%), Gaps = 3/117 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I++IE + L L+ LEL N+ I N+ L NL+IL L NR+ + GL L NLE
Sbjct: 150 NRIQRIEGLEGLAKLRNLELGANR---IRNISHLSNLKILSLPSNRLTSLSGLSGLTNLE 206
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+LY+ N I+ I ++ L L VL++ +N+I +EN+ LT++EE++ NK+S +
Sbjct: 207 ELYVSHNAITHISGLESLANLHVLDISNNQISKLENISHLTHIEEVWASNNKLSSFE 263
>gi|124002318|ref|ZP_01687171.1| leucine-rich protein [Microscilla marina ATCC 23134]
gi|123992147|gb|EAY31515.1| leucine-rich protein [Microscilla marina ATCC 23134]
Length = 1282
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 131/212 (61%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ RL L +N KIE +H L LK+LEL +N + IENL L L+ L+L FN ++
Sbjct: 195 TALTRLDLGYNGFGKIEGLHNLPRLKQLELEENDIKKIENLHHLPQLKSLNLRFNSFEKL 254
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
+ LD L L +L L N ISKIE ++ L KLK+L L N++ +ENLD LT LE+L++
Sbjct: 255 ENLDALTELTELSLGYNGISKIEGLEKLTKLKMLGLMFNRVTKLENLDTLTELEKLWMNH 314
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
I +I+NL LTKL LSL C+++ IENLEALT LT L L ++ IENL + L
Sbjct: 315 TGIKKIENLDKLTKLTHLSLMCSKVTKIENLEALTQLTSLSLHATKISKIENLEALTNLT 374
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
L V NK++ I+N+ +LT+L + + N +S
Sbjct: 375 KLRVDGNKVAKIENLDNLTQLDDLMLGGNPIS 406
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 147/235 (62%), Gaps = 3/235 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+++L LR + KIEN++ L L EL+L + +T IE L L L+ L LS N+I +I+
Sbjct: 461 LQKLELRATKVSKIENLNHLPALTELDLSETAITKIEGLTGLEGLKELSLSKNKITKIEN 520
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+ LEKL LC++ +SKIEN+ L KL+ L L N I +ENL GL L+EL L N+
Sbjct: 521 LAGLSKLEKLSLCASNLSKIENLTGLPKLRELCLEKNAIECLENLRGLPALKELDLNNNQ 580
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ I A T+L L+L N+L +E+L +T LT+L LSEN ++ IEN LETL
Sbjct: 581 ITHIQPNALPTQLAELNLSQNQLIKVEHLAGVTGLTELDLSENNISKIENFEDLPALETL 640
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
D++YNKI+ ++N+ L L+E I NQ+++ T V +QLQ + L++N ++
Sbjct: 641 DLSYNKITRLENLTALPNLREVNIYQNQITEIATDAV---TRQLQELDLEQNQIS 692
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/229 (40%), Positives = 136/229 (59%), Gaps = 22/229 (9%)
Query: 63 RLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLD 122
+L+LR N I +IENI LT L+ L+L +N + VIENLD L LE L+L N I +I L+
Sbjct: 89 KLVLRENSIDRIENIAHLTNLQYLDLEENDIEVIENLDHLARLEYLNLRGNAIEKIGNLN 148
Query: 123 HLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG----- 177
L L L L SN + ++EN++HLK L+ L+L +N I+ IENL GLT L L LG
Sbjct: 149 ALTQLVHLELSSNSLERVENLNHLKHLQNLDLRENNIKKIENLAGLTALTRLDLGYNGFG 208
Query: 178 -----------------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYL 220
+N I +I+NL L +L L+L+ N +ENL+ALT LT+L L
Sbjct: 209 KIEGLHNLPRLKQLELEENDIKKIENLHHLPQLKSLNLRFNSFEKLENLDALTELTELSL 268
Query: 221 SENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQV 269
NG++ IE L KL+ L + +N+++ ++N+ LTEL++ W+N +
Sbjct: 269 GYNGISKIEGLEKLTKLKMLGLMFNRVTKLENLDTLTELEKLWMNHTGI 317
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 123/192 (64%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
+ KIEN+ LT L L L+ +++ IENL+ L NL L + N++ +I+ LD+L L+ L
Sbjct: 339 VTKIENLEALTQLTSLSLHATKISKIENLEALTNLTKLRVDGNKVAKIENLDNLTQLDDL 398
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N ISKIEN+ HL KL+ L+LG I IENL+GL LE+L LG ++I I+NL L
Sbjct: 399 MLGGNPISKIENLGHLIKLRKLDLGGLAITKIENLEGLRTLEQLDLGGSQIETIENLEGL 458
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T L L L+ ++ IENL L LT+L LSE +T IE L E L+ L ++ NKI+ I
Sbjct: 459 TGLQKLELRATKVSKIENLNHLPALTELDLSETAITKIEGLTGLEGLKELSLSKNKITKI 518
Query: 251 QNIAHLTELQEF 262
+N+A L++L++
Sbjct: 519 ENLAGLSKLEKL 530
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 129/202 (63%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+++L L N IKKIEN+H L LK L L N +ENLD L L L L +N I +I+G
Sbjct: 219 LKQLELEENDIKKIENLHHLPQLKSLNLRFNSFEKLENLDALTELTELSLGYNGISKIEG 278
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L L+ L L N+++K+EN+D L +L+ L + I+ IENLD LT L L L +K
Sbjct: 279 LEKLTKLKMLGLMFNRVTKLENLDTLTELEKLWMNHTGIKKIENLDKLTKLTHLSLMCSK 338
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
+++I+NL +LT+L LSL ++ IENLEALTNLT+L + N + IENL + +L+ L
Sbjct: 339 VTKIENLEALTQLTSLSLHATKISKIENLEALTNLTKLRVDGNKVAKIENLDNLTQLDDL 398
Query: 241 DVAYNKISIIQNIAHLTELQEF 262
+ N IS I+N+ HL +L++
Sbjct: 399 MLGGNPISKIENLGHLIKLRKL 420
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/257 (38%), Positives = 144/257 (56%), Gaps = 19/257 (7%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N ++++EN++ L L+ L+L +N + IENL L L LDL +N +I+GL +L L+
Sbjct: 161 NSLERVENLNHLKHLQNLDLRENNIKKIENLAGLTALTRLDLGYNGFGKIEGLHNLPRLK 220
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L L N I KIEN+ HL +LK L L N +ENLD LT L EL LG N IS+I+ L
Sbjct: 221 QLELEENDIKKIENLHHLPQLKSLNLRFNSFEKLENLDALTELTELSLGYNGISKIEGLE 280
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LTKL +L L NR+ +ENL+ LT L +L+++ G+ IENL KL L + +K++
Sbjct: 281 KLTKLKMLGLMFNRVTKLENLDTLTELEKLWMNHTGIKKIENLDKLTKLTHLSLMCSKVT 340
Query: 249 IIQNIAHLTELQEFWINDNQVS----------------DWNTVNVLE---NNKQLQTIYL 289
I+N+ LT+L ++ ++S D N V +E N QL + L
Sbjct: 341 KIENLEALTQLTSLSLHATKISKIENLEALTNLTKLRVDGNKVAKIENLDNLTQLDDLML 400
Query: 290 DRNPVAQDPNYRRKIKL 306
NP+++ N IKL
Sbjct: 401 GGNPISKIENLGHLIKL 417
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 130/209 (62%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L+L N I KIEN+ L L++L+L +T IENL+ L LE LDL ++I I+
Sbjct: 395 LDDLMLGGNPISKIENLGHLIKLRKLDLGGLAITKIENLEGLRTLEQLDLGGSQIETIEN 454
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L L+KL L + K+SKIEN++HL L L+L + I IE L GL L+EL L KNK
Sbjct: 455 LEGLTGLQKLELRATKVSKIENLNHLPALTELDLSETAITKIEGLTGLEGLKELSLSKNK 514
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I++I+NLA L+KL LSL + L IENL L L +L L +N + +ENL L+ L
Sbjct: 515 ITKIENLAGLSKLEKLSLCASNLSKIENLTGLPKLRELCLEKNAIECLENLRGLPALKEL 574
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQV 269
D+ N+I+ IQ A T+L E ++ NQ+
Sbjct: 575 DLNNNQITHIQPNALPTQLAELNLSQNQL 603
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 134/231 (58%), Gaps = 3/231 (1%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
LR+N +K+EN+ LT L EL L N ++ IE L+ L L++L L FNR+ +++ LD L
Sbjct: 246 LRFNSFEKLENLDALTELTELSLGYNGISKIEGLEKLTKLKMLGLMFNRVTKLENLDTLT 305
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
LEKL++ I KIEN+D L KL L L +K+ IENL+ LT L L L KIS+I+
Sbjct: 306 ELEKLWMNHTGIKKIENLDKLTKLTHLSLMCSKVTKIENLEALTQLTSLSLHATKISKIE 365
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
NL +LT L L + N++ IENL+ LT L L L N ++ IENL KL LD+
Sbjct: 366 NLEALTNLTKLRVDGNKVAKIENLDNLTQLDDLMLGGNPISKIENLGHLIKLRKLDLGGL 425
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ 296
I+ I+N+ L L++ + +Q+ T+ LE LQ + L V++
Sbjct: 426 AITKIENLEGLRTLEQLDLGGSQIE---TIENLEGLTGLQKLELRATKVSK 473
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 129/215 (60%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L +N I KIE + LT LK L L N++T +ENLDTL LE L ++ I++I+ LD
Sbjct: 266 LSLGYNGISKIEGLEKLTKLKMLGLMFNRVTKLENLDTLTELEKLWMNHTGIKKIENLDK 325
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L L L L +K++KIEN++ L +L L L KI IENL+ LTNL +L + NK+++
Sbjct: 326 LTKLTHLSLMCSKVTKIENLEALTQLTSLSLHATKISKIENLEALTNLTKLRVDGNKVAK 385
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I+NL +LT+L+ L L N + IENL L L +L L +T IENL LE LD+
Sbjct: 386 IENLDNLTQLDDLMLGGNPISKIENLGHLIKLRKLDLGGLAITKIENLEGLRTLEQLDLG 445
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
++I I+N+ LT LQ+ + +VS +N L
Sbjct: 446 GSQIETIENLEGLTGLQKLELRATKVSKIENLNHL 480
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 119/199 (59%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I KIEN+ LT L +L + N++ IENLD L L+ L L N I +I+ L HL L KL
Sbjct: 361 ISKIENLEALTNLTKLRVDGNKVAKIENLDNLTQLDDLMLGGNPISKIENLGHLIKLRKL 420
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L I+KIEN++ L+ L+ L+LG ++I IENL+GLT L++L L K+S+I+NL L
Sbjct: 421 DLGGLAITKIENLEGLRTLEQLDLGGSQIETIENLEGLTGLQKLELRATKVSKIENLNHL 480
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
L L L + IE L L L +L LS+N +T IENL KLE L + + +S I
Sbjct: 481 PALTELDLSETAITKIEGLTGLEGLKELSLSKNKITKIENLAGLSKLEKLSLCASNLSKI 540
Query: 251 QNIAHLTELQEFWINDNQV 269
+N+ L +L+E + N +
Sbjct: 541 ENLTGLPKLRELCLEKNAI 559
>gi|56755647|gb|AAW26002.1| SJCHGC02345 protein [Schistosoma japonicum]
Length = 216
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 128/190 (67%), Gaps = 2/190 (1%)
Query: 31 NQMSLDNPD-EESEAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLT-TLKELEL 88
+++ ++NPD EE E K + + + L LR NL+KK+E+ ++ TL++L++
Sbjct: 25 DELDIENPDDEEINLEHCRIKCISKLDRFPNVRSLCLRNNLLKKLESFEPVSETLEDLDV 84
Query: 89 YDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKK 148
YDNQ++ IENL+ L L LDLSFNRI+ I+ L++L NL+K+Y +N ISKIEN+ +L+
Sbjct: 85 YDNQISRIENLECLTKLTNLDLSFNRIKRIENLENLNNLKKVYFVNNSISKIENLSNLRD 144
Query: 149 LKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIEN 208
L++LELG NKIR +ENL+ L +LY GKNKIS I NL +L L I S+Q NR+ +
Sbjct: 145 LEMLELGSNKIRKLENLEQFKKLTQLYCGKNKISTIVNLDNLINLIIFSIQGNRITKMNG 204
Query: 209 LEALTNLTQL 218
L+ L NL QL
Sbjct: 205 LQRLVNLEQL 214
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 108/181 (59%), Gaps = 1/181 (0%)
Query: 84 KELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA-NLEKLYLCSNKISKIEN 142
+E+ L ++ I LD N+ L L N +++++ + ++ LE L + N+IS+IEN
Sbjct: 35 EEINLEHCRIKCISKLDRFPNVRSLCLRNNLLKKLESFEPVSETLEDLDVYDNQISRIEN 94
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
++ L KL L+L N+I+ IENL+ L NL+++Y N IS+I+NL++L L +L L N+
Sbjct: 95 LECLTKLTNLDLSFNRIKRIENLENLNNLKKVYFVNNSISKIENLSNLRDLEMLELGSNK 154
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+R +ENLE LTQLY +N ++TI NL + L + N+I+ + + L L++
Sbjct: 155 IRKLENLEQFKKLTQLYCGKNKISTIVNLDNLINLIIFSIQGNRITKMNGLQRLVNLEQL 214
Query: 263 W 263
Sbjct: 215 L 215
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 5/190 (2%)
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKK-LKVLEL 154
IEN D E ++L RI+ I LD N+ L L +N + K+E+ + + + L+ L++
Sbjct: 29 IENPDD----EEINLEHCRIKCISKLDRFPNVRSLCLRNNLLKKLESFEPVSETLEDLDV 84
Query: 155 GDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTN 214
DN+I IENL+ LT L L L N+I RI+NL +L L + N + IENL L +
Sbjct: 85 YDNQISRIENLECLTKLTNLDLSFNRIKRIENLENLNNLKKVYFVNNSISKIENLSNLRD 144
Query: 215 LTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L L L N + +ENL +KL L NKIS I N+ +L L F I N+++ N
Sbjct: 145 LEMLELGSNKIRKLENLEQFKKLTQLYCGKNKISTIVNLDNLINLIIFSIQGNRITKMNG 204
Query: 275 VNVLENNKQL 284
+ L N +QL
Sbjct: 205 LQRLVNLEQL 214
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 11/151 (7%)
Query: 162 IENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT-NLTQLYL 220
IEN D EE+ L +I I L + L L+ N L+ +E+ E ++ L L +
Sbjct: 29 IENPDD----EEINLEHCRIKCISKLDRFPNVRSLCLRNNLLKKLESFEPVSETLEDLDV 84
Query: 221 SENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+N ++ IENL KL LD+++N+I I+N+ +L L++ + +N +S + L N
Sbjct: 85 YDNQISRIENLECLTKLTNLDLSFNRIKRIENLENLNNLKKVYFVNNSIS---KIENLSN 141
Query: 281 NKQLQTIYLDRNPVAQDPN---YRRKIKLVC 308
+ L+ + L N + + N +++ +L C
Sbjct: 142 LRDLEMLELGSNKIRKLENLEQFKKLTQLYC 172
>gi|188995660|ref|YP_001929912.1| hypothetical protein PGN_1796 [Porphyromonas gingivalis ATCC 33277]
gi|188595340|dbj|BAG34315.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
33277]
Length = 1125
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 154/254 (60%), Gaps = 7/254 (2%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++ L LR + ++K+E + LT+L EL L N++ +E L+ L +L L LS N+I +++
Sbjct: 97 AVKTLDLRGSQVRKLEGLERLTSLTELYLSGNRIRKLEGLERLTSLTELYLSGNQISKLE 156
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
GLDHL +L L+L N+ISK+E +D L L VL+L N+I +E LD LT+L EL L N
Sbjct: 157 GLDHLTSLTTLFLSHNQISKLEGLDGLTSLTVLDLSHNQISKLEGLDHLTSLTELDLRDN 216
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
+I +++ L LT L L L+ N++R +E L AL++LT+LYLS N + +E L L
Sbjct: 217 QIRKLEGLDHLTSLTELDLRDNQIRKLEGLNALSSLTELYLSGNQIAKLEGLDHLTSLIN 276
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPN 299
L ++ N+IS I +A LT L+ +++ NQ+ + + L++ QLQ + + N + +
Sbjct: 277 LFLSGNRISKIDGLASLTSLRMLYLSKNQI---DNLEELKDLTQLQKLDVSGNKIQSVDD 333
Query: 300 YRRKIKLVCPWIVQ 313
IKL+ P + Q
Sbjct: 334 ----IKLLAPILGQ 343
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%)
Query: 187 LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK 246
L + L L+ +++R +E LE LT+LT+LYLS N + +E L L L ++ N+
Sbjct: 92 LVDFPAVKTLDLRGSQVRKLEGLERLTSLTELYLSGNRIRKLEGLERLTSLTELYLSGNQ 151
Query: 247 ISIIQNIAHLTELQEFWINDNQVS 270
IS ++ + HLT L +++ NQ+S
Sbjct: 152 ISKLEGLDHLTSLTTLFLSHNQIS 175
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 22/116 (18%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
LR N I+K+E ++ L++L EL L NQ+ +E LD L +L L LS NRI +I GL L
Sbjct: 235 LRDNQIRKLEGLNALSSLTELYLSGNQIAKLEGLDHLTSLINLFLSGNRISKIDGLASLT 294
Query: 126 NLEKLYL----------------------CSNKISKIENVDHLKKLKVLELGDNKI 159
+L LYL NKI ++++ L + L D KI
Sbjct: 295 SLRMLYLSKNQIDNLEELKDLTQLQKLDVSGNKIQSVDDIKLLAPILGQRLKDLKI 350
>gi|170576620|ref|XP_001893703.1| Leucine Rich Repeat family protein [Brugia malayi]
gi|158600141|gb|EDP37460.1| Leucine Rich Repeat family protein [Brugia malayi]
Length = 202
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/148 (56%), Positives = 106/148 (71%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
IE L LRWNLIKKIEN+HML TL EL+LYDNQ+T IENLD L+NLE LDLSFNRI ++
Sbjct: 52 SIEHLCLRWNLIKKIENLHMLVTLTELDLYDNQITKIENLDELVNLESLDLSFNRITVLE 111
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L L+ Y NKI KIE +D L +L+ LELGDN+I+ IENL T ++ L+LG N
Sbjct: 112 NLSALKKLKNAYFVHNKIRKIEGLDELTELEYLELGDNQIKKIENLSKNTKIKRLFLGAN 171
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIE 207
+I+ I+NL L + +LSL N ++ I+
Sbjct: 172 QIANIENLDLLNDIEVLSLPANAIQEIK 199
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 101/164 (61%)
Query: 108 LDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG 167
LDL+ +RI++I+G D L ++E L L N I KIEN+ L L L+L DN+I IENLD
Sbjct: 34 LDLTRHRIKKIEGFDFLHSIEHLCLRWNLIKKIENLHMLVTLTELDLYDNQITKIENLDE 93
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
L NLE L L N+I+ ++NL++L KL N++R IE L+ LT L L L +N +
Sbjct: 94 LVNLESLDLSFNRITVLENLSALKKLKNAYFVHNKIRKIEGLDELTELEYLELGDNQIKK 153
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
IENL N K++ L + N+I+ I+N+ L +++ + N + +
Sbjct: 154 IENLSKNTKIKRLFLGANQIANIENLDLLNDIEVLSLPANAIQE 197
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 104/178 (58%)
Query: 74 IENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLC 133
IE + + + KEL+L +++ IE D L ++E L L +N I++I+ L L L +L L
Sbjct: 22 IEYVEVDASTKELDLTRHRIKKIEGFDFLHSIEHLCLRWNLIKKIENLHMLVTLTELDLY 81
Query: 134 SNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKL 193
N+I+KIEN+D L L+ L+L N+I ++ENL L L+ Y NKI +I+ L LT+L
Sbjct: 82 DNQITKIENLDELVNLESLDLSFNRITVLENLSALKKLKNAYFVHNKIRKIEGLDELTEL 141
Query: 194 NILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQ 251
L L N+++ IENL T + +L+L N + IENL +E L + N I I+
Sbjct: 142 EYLELGDNQIKKIENLSKNTKIKRLFLGANQIANIENLDLLNDIEVLSLPANAIQEIK 199
>gi|34541475|ref|NP_905954.1| leucine-rich protein [Porphyromonas gingivalis W83]
gi|34397792|gb|AAQ66853.1| leucine-rich protein [Porphyromonas gingivalis W83]
Length = 1266
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 131/211 (62%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+++L L +N I K+E + LT+L +L L NQ+ +E LD+L +L L LS N+I +++
Sbjct: 100 ALKKLDLSYNQISKLEGLERLTSLTKLRLRSNQIRKLEGLDSLTSLTKLSLSDNQISKLE 159
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
GL+ L +L +LYL N+ISK+E ++ L L LEL N+IR +E L+ LT+L L L N
Sbjct: 160 GLERLTSLAELYLLDNQISKLEGLERLTSLATLELSGNQIRKLEGLERLTSLATLELSGN 219
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
+I +++ L LT L L L+ N++ +E LE LT+L L LS N + +E L L T
Sbjct: 220 QIRKLEGLERLTSLTKLRLRSNQISKLEGLERLTSLATLELSGNQIRKLEGLERLTSLAT 279
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
L+++ N+IS ++ + L+ L + + NQ+S
Sbjct: 280 LELSGNQISKLEGLERLSSLTKLRLRSNQIS 310
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 130/205 (63%), Gaps = 6/205 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I K+E + LT+L LEL NQ+ +E L+ L +L L+LS N+IR+++GL+ L +L
Sbjct: 175 NQISKLEGLERLTSLATLELSGNQIRKLEGLERLTSLATLELSGNQIRKLEGLERLTSLT 234
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
KL L SN+ISK+E ++ L L LEL N+IR +E L+ LT+L L L N+IS+++ L
Sbjct: 235 KLRLRSNQISKLEGLERLTSLATLELSGNQIRKLEGLERLTSLATLELSGNQISKLEGLE 294
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAY---N 245
L+ L L L+ N++ +E LE LT+LT+L LS+N ++ +E L E+L +L Y N
Sbjct: 295 RLSSLTKLRLRSNQISKLEGLERLTSLTKLSLSDNQISKLEGL---ERLTSLAELYLLDN 351
Query: 246 KISIIQNIAHLTELQEFWINDNQVS 270
+I ++ + LT L + + NQ+S
Sbjct: 352 QIRKLEGLERLTSLTKLRLRSNQIS 376
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 141/231 (61%), Gaps = 3/231 (1%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I+K+E + LT+L +L L NQ++ +E L+ L +L L+LS N+IR+++GL+ L
Sbjct: 216 LSGNQIRKLEGLERLTSLTKLRLRSNQISKLEGLERLTSLATLELSGNQIRKLEGLERLT 275
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+L L L N+ISK+E ++ L L L L N+I +E L+ LT+L +L L N+IS+++
Sbjct: 276 SLATLELSGNQISKLEGLERLSSLTKLRLRSNQISKLEGLERLTSLTKLSLSDNQISKLE 335
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L LT L L L N++R +E LE LT+LT+L L N ++ +E L S L L ++ N
Sbjct: 336 GLERLTSLAELYLLDNQIRKLEGLERLTSLTKLRLRSNQISKLEGLDSLTSLTKLSLSDN 395
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ 296
+IS ++ + LT L E ++ DNQ+ ++ L + L + L RN +++
Sbjct: 396 QISKLEGLERLTSLAELYLLDNQIRKLEGLDGLAS---LTRLSLRRNQISK 443
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 133/211 (63%), Gaps = 6/211 (2%)
Query: 63 RLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLD 122
+L LR N I K+E + LT+L LEL NQ+ +E L+ L +L L+LS N+I +++GL+
Sbjct: 235 KLRLRSNQISKLEGLERLTSLATLELSGNQIRKLEGLERLTSLATLELSGNQISKLEGLE 294
Query: 123 HLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKIS 182
L++L KL L SN+ISK+E ++ L L L L DN+I +E L+ LT+L ELYL N+I
Sbjct: 295 RLSSLTKLRLRSNQISKLEGLERLTSLTKLSLSDNQISKLEGLERLTSLAELYLLDNQIR 354
Query: 183 RIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDV 242
+++ L LT L L L+ N++ +E L++LT+LT+L LS+N ++ +E L E+L +L
Sbjct: 355 KLEGLERLTSLTKLRLRSNQISKLEGLDSLTSLTKLSLSDNQISKLEGL---ERLTSLAE 411
Query: 243 AY---NKISIIQNIAHLTELQEFWINDNQVS 270
Y N+I ++ + L L + NQ+S
Sbjct: 412 LYLLDNQIRKLEGLDGLASLTRLSLRRNQIS 442
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/191 (39%), Positives = 117/191 (61%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
LK+L+L NQ++ +E L+ L +L L L N+IR+++GLD L +L KL L N+ISK
Sbjct: 98 FPALKKLDLSYNQISKLEGLERLTSLTKLRLRSNQIRKLEGLDSLTSLTKLSLSDNQISK 157
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
+E ++ L L L L DN+I +E L+ LT+L L L N+I +++ L LT L L L
Sbjct: 158 LEGLERLTSLAELYLLDNQISKLEGLERLTSLATLELSGNQIRKLEGLERLTSLATLELS 217
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N++R +E LE LT+LT+L L N ++ +E L L TL+++ N+I ++ + LT L
Sbjct: 218 GNQIRKLEGLERLTSLTKLRLRSNQISKLEGLERLTSLATLELSGNQIRKLEGLERLTSL 277
Query: 260 QEFWINDNQVS 270
++ NQ+S
Sbjct: 278 ATLELSGNQIS 288
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 123/207 (59%), Gaps = 5/207 (2%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I K+E + L++L +L L NQ++ +E L+ L +L L LS N+I +++GL+ L
Sbjct: 282 LSGNQISKLEGLERLSSLTKLRLRSNQISKLEGLERLTSLTKLSLSDNQISKLEGLERLT 341
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+L +LYL N+I K+E ++ L L L L N+I +E LD LT+L +L L N+IS+++
Sbjct: 342 SLAELYLLDNQIRKLEGLERLTSLTKLRLRSNQISKLEGLDSLTSLTKLSLSDNQISKLE 401
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L LT L L L N++R +E L+ L +LT+L L N ++ +E L + L LDV+ N
Sbjct: 402 GLERLTSLAELYLLDNQIRKLEGLDGLASLTRLSLRRNQISKLEGLDRLKVLRKLDVSGN 461
Query: 246 KISIIQNIAHLTE-----LQEFWINDN 267
I I +I L L++ I+DN
Sbjct: 462 DIQSIDDIKLLAPILEQTLEKLRIHDN 488
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 96/153 (62%)
Query: 63 RLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLD 122
+L L N I K+E + LT+L EL L DNQ+ +E L+ L +L L L N+I +++GLD
Sbjct: 323 KLSLSDNQISKLEGLERLTSLAELYLLDNQIRKLEGLERLTSLTKLRLRSNQISKLEGLD 382
Query: 123 HLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKIS 182
L +L KL L N+ISK+E ++ L L L L DN+IR +E LDGL +L L L +N+IS
Sbjct: 383 SLTSLTKLSLSDNQISKLEGLERLTSLAELYLLDNQIRKLEGLDGLASLTRLSLRRNQIS 442
Query: 183 RIDNLASLTKLNILSLQCNRLRTIENLEALTNL 215
+++ L L L L + N +++I++++ L +
Sbjct: 443 KLEGLDRLKVLRKLDVSGNDIQSIDDIKLLAPI 475
>gi|315041605|ref|XP_003170179.1| hypothetical protein MGYG_07423 [Arthroderma gypseum CBS 118893]
gi|311345213|gb|EFR04416.1| hypothetical protein MGYG_07423 [Arthroderma gypseum CBS 118893]
Length = 200
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 125/178 (70%), Gaps = 3/178 (1%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
++ K+L+ LELG NKIR I+NLD L LEEL+LGKNKIS I N++SLT L ILS+ NR
Sbjct: 1 MEEFKELRNLELGANKIREIDNLDTLAALEELWLGKNKISEIKNISSLTNLKILSMPSNR 60
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + LE+L++L +LYLS+N LT I L +N L LD++ NK+S ++N++HLT+L+E
Sbjct: 61 IEKLSGLESLSSLEELYLSDNLLTEISGLENNATLRVLDISNNKVSRLENLSHLTKLEEL 120
Query: 263 WINDNQVSDWNTVNV-LENNKQLQTIYLDRNPV--AQDPNYRRKIKLVCPWIVQIDAT 317
W ++NQ++ + V L++ ++L T+Y + NP+ A YR K++L P I QIDA+
Sbjct: 121 WASNNQLASFEEVERELKDKEELNTVYFEGNPLQKAAPALYRNKVRLALPQIKQIDAS 178
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 88/132 (66%), Gaps = 2/132 (1%)
Query: 54 EESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFN 113
EE KE + L L N I++I+N+ L L+EL L N+++ I+N+ +L NL+IL + N
Sbjct: 2 EEFKE--LRNLELGANKIREIDNLDTLAALEELWLGKNKISEIKNISSLTNLKILSMPSN 59
Query: 114 RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEE 173
RI ++ GL+ L++LE+LYL N +++I +++ L+VL++ +NK+ +ENL LT LEE
Sbjct: 60 RIEKLSGLESLSSLEELYLSDNLLTEISGLENNATLRVLDISNNKVSRLENLSHLTKLEE 119
Query: 174 LYLGKNKISRID 185
L+ N+++ +
Sbjct: 120 LWASNNQLASFE 131
>gi|428169148|gb|EKX38085.1| hypothetical protein GUITHDRAFT_165324, partial [Guillardia theta
CCMP2712]
Length = 270
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 109/164 (66%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+++L+LR N + +LT+L+ L+LY N L + L NL++LDLSFN IR+I+
Sbjct: 107 LKKLVLRDNELSSPGCASILTSLQHLDLYQNNLKASTFFECLTNLKVLDLSFNEIRKIEK 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L LE++Y +NKI+ IEN+ L L LELG N+IR I+ L+ L +L+ L+LGKNK
Sbjct: 167 LESLQKLEEIYFVNNKIASIENLSTLTNLTNLELGSNRIREIQGLETLVSLKTLWLGKNK 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENG 224
I+++ L SLT LN+L++ NRL +E L L L +LY+S NG
Sbjct: 227 IAQLSGLDSLTSLNLLAVSSNRLTVLEGLSTLKGLKELYVSHNG 270
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 110/202 (54%), Gaps = 22/202 (10%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N +K++ ++ +L+ LK+L L DN+L+ L +L+ LDL N ++
Sbjct: 90 LTGNRLKEVPDLSILSRLKKLVLRDNELSSPGCASILTSLQHLDLYQNNLKA-------- 141
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+ C L LKVL+L N+IR IE L+ L LEE+Y NKI+ I+
Sbjct: 142 --STFFEC------------LTNLKVLDLSFNEIRKIEKLESLQKLEEIYFVNNKIASIE 187
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
NL++LT L L L NR+R I+ LE L +L L+L +N + + L S L L V+ N
Sbjct: 188 NLSTLTNLTNLELGSNRIREIQGLETLVSLKTLWLGKNKIAQLSGLDSLTSLNLLAVSSN 247
Query: 246 KISIIQNIAHLTELQEFWINDN 267
++++++ ++ L L+E +++ N
Sbjct: 248 RLTVLEGLSTLKGLKELYVSHN 269
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 102/185 (55%), Gaps = 3/185 (1%)
Query: 108 LDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG 167
+DL+ NR++E+ L L+ L+KL L N++S L L+ L+L N ++ +
Sbjct: 88 VDLTGNRLKEVPDLSILSRLKKLVLRDNELSSPGCASILTSLQHLDLYQNNLKASTFFEC 147
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNL+ L L N+I +I+ L SL KL + N++ +IENL LTNLT L L N +
Sbjct: 148 LTNLKVLDLSFNEIRKIEKLESLQKLEEIYFVNNKIASIENLSTLTNLTNLELGSNRIRE 207
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
I+ L + L+TL + NKI+ + + LT L ++ N+++ ++ L K L+ +
Sbjct: 208 IQGLETLVSLKTLWLGKNKIAQLSGLDSLTSLNLLAVSSNRLTVLEGLSTL---KGLKEL 264
Query: 288 YLDRN 292
Y+ N
Sbjct: 265 YVSHN 269
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 83/150 (55%), Gaps = 3/150 (2%)
Query: 147 KKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTI 206
++L ++L N+++ + +L L+ L++L L N++S + LT L L L N L+
Sbjct: 83 ERLTDVDLTGNRLKEVPDLSILSRLKKLVLRDNELSSPGCASILTSLQHLDLYQNNLKAS 142
Query: 207 ENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWIND 266
E LTNL L LS N + IE L S +KLE + NKI+ I+N++ LT L +
Sbjct: 143 TFFECLTNLKVLDLSFNEIRKIEKLESLQKLEEIYFVNNKIASIENLSTLTNLTNLELGS 202
Query: 267 NQVSDWNTVNVLENNKQLQTIYLDRNPVAQ 296
N++ + + LE L+T++L +N +AQ
Sbjct: 203 NRIRE---IQGLETLVSLKTLWLGKNKIAQ 229
>gi|218960535|ref|YP_001740310.1| putative Phosphoprotein phosphatase [Candidatus Cloacamonas
acidaminovorans]
gi|167729192|emb|CAO80103.1| putative Phosphoprotein phosphatase [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 3445
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 128/237 (54%), Gaps = 25/237 (10%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L WN I + + LT L+EL+LY NQ++ + L L NL LDLS+N+I ++
Sbjct: 3012 LQELYLYWNQIGDLSPLAGLTNLQELDLYSNQISDLSPLAELTNLWYLDLSYNQISDLSP 3071
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ LYL G N+I + L GLTNL+ L L N+
Sbjct: 3072 LAGLTNLQDLYL----------------------GWNQINYLSPLAGLTNLQVLNLYSNQ 3109
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + LA LT L L L N++ + L LTNL LYL+ N ++ + L+ L+ L
Sbjct: 3110 ISDLSPLAELTNLQYLHLYYNQISDLSPLTGLTNLHYLYLAYNQISDLSPLIGLTNLQYL 3169
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
+ YN+IS I +A LT LQ W++ NQ+SD + + L N L ++LD NP++ +
Sbjct: 3170 HLYYNQISDISPLAELTNLQYLWLDSNQISDLSPLAGLTN---LWWLWLDGNPISYE 3223
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 130/237 (54%), Gaps = 3/237 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N I + + LT L++L L NQ+ + L L NL+ LDL+ N+I I
Sbjct: 2359 LQYLDLGGNQISDLSPLAGLTNLQDLYLGWNQINYLSPLAGLTNLQELDLNNNQISNINP 2418
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+KLYL N+IS + + L L+ L L N+I I L GLTNL+ L L N+
Sbjct: 2419 LAGLTNLQKLYLYYNQISDLSPLSGLTNLQYLLLEYNQISNISPLAGLTNLQVLDLYSNQ 2478
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + LA LT L L L N++ + L L NL L+L N + + L+ L+ L
Sbjct: 2479 ISDLSPLAELTNLWYLDLSYNQISDLSPLVGLVNLQGLWLDNNQINDLSPLIGLTNLQYL 2538
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
+ YN+IS + + LT L ++ NQ+SD ++V L N LQ +YLD NP++ +
Sbjct: 2539 HLYYNQISDLSPLTGLTNLHYLYLAYNQISDLSSVEGLTN---LQELYLDYNPISYE 2592
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 113/199 (56%)
Query: 90 DNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKL 149
DN + + L L NL+ LDL N+I ++ L L NL+ LYL N+I+ + + L L
Sbjct: 2344 DNMINYLSPLAGLTNLQYLDLGGNQISDLSPLAGLTNLQDLYLGWNQINYLSPLAGLTNL 2403
Query: 150 KVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
+ L+L +N+I I L GLTNL++LYL N+IS + L+ LT L L L+ N++ I L
Sbjct: 2404 QELDLNNNQISNINPLAGLTNLQKLYLYYNQISDLSPLSGLTNLQYLLLEYNQISNISPL 2463
Query: 210 EALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQV 269
LTNL L L N ++ + L L LD++YN+IS + + L LQ W+++NQ+
Sbjct: 2464 AGLTNLQVLDLYSNQISDLSPLAELTNLWYLDLSYNQISDLSPLVGLVNLQGLWLDNNQI 2523
Query: 270 SDWNTVNVLENNKQLQTIY 288
+D + + L N + L Y
Sbjct: 2524 NDLSPLIGLTNLQYLHLYY 2542
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/225 (36%), Positives = 121/225 (53%), Gaps = 3/225 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I IE LT L+ L+L NQ++ + L L NL+ L L +N+I ++ L L NL+ L
Sbjct: 2934 IISIEGAQYLTNLQSLDLDSNQISDLSPLAGLTNLQELYLYYNQISDLSPLAELTNLQYL 2993
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+IS + + L L+ L L N+I + L GLTNL+EL L N+IS + LA L
Sbjct: 2994 DLGGNQISDLSPLAGLNNLQELYLYWNQIGDLSPLAGLTNLQELDLYSNQISDLSPLAEL 3053
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T L L L N++ + L LTNL LYL N + + L L+ L++ N+IS +
Sbjct: 3054 TNLWYLDLSYNQISDLSPLAGLTNLQDLYLGWNQINYLSPLAGLTNLQVLNLYSNQISDL 3113
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+A LT LQ + NQ+SD + + L N L +YL N ++
Sbjct: 3114 SPLAELTNLQYLHLYYNQISDLSPLTGLTN---LHYLYLAYNQIS 3155
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 116/222 (52%), Gaps = 22/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH------- 123
I IE LT L+ + LY NQ++ + L L NL+ L L N+I +I L
Sbjct: 1089 IISIEGAQYLTNLQVMYLYSNQISDLSPLAGLANLQELLLYANQISDISPLAGLNNLQYL 1148
Query: 124 ---------------LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGL 168
L NL+ L L N+IS I + L L+VL+L N+I + L GL
Sbjct: 1149 LLQYNQISDLSPLAGLTNLQNLILAYNQISDISPLAGLTNLQVLDLYSNQISYLSPLAGL 1208
Query: 169 TNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTI 228
TNL+ELYL N+IS + LA +T L +++L+ N++ + L LTNL L L N + I
Sbjct: 1209 TNLQELYLHSNQISDLSPLAGMTNLRVINLKNNQISDLSPLAGLTNLQYLLLGWNKINDI 1268
Query: 229 ENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
L L +L+++YN+IS + +A LT L ++++N +S
Sbjct: 1269 SPLAGLTNLWSLNLSYNQISDLSPLAGLTNLWYLYLDNNPIS 1310
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 101/179 (56%), Gaps = 1/179 (0%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I + + LT L+ L L NQ++ I L L NL++LDL N+I + L L NL++L
Sbjct: 1155 ISDLSPLAGLTNLQNLILAYNQISDISPLAGLTNLQVLDLYSNQISYLSPLAGLTNLQEL 1214
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
YL SN+IS + + + L+V+ L +N+I + L GLTNL+ L LG NKI+ I LA L
Sbjct: 1215 YLHSNQISDLSPLAGMTNLRVINLKNNQISDLSPLAGLTNLQYLLLGWNKINDISPLAGL 1274
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE-KLETLDVAYNKIS 248
T L L+L N++ + L LTNL LYL N ++ LLS L +YN +S
Sbjct: 1275 TNLWSLNLSYNQISDLSPLAGLTNLWYLYLDNNPISYESMLLSQSWALPWSTSSYNPLS 1333
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/222 (38%), Positives = 119/222 (53%), Gaps = 3/222 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I IE LT L+ L+L NQ++ + L L NL L L N I + L L NL+ L
Sbjct: 2303 IISIEGAQYLTNLQSLDLDSNQISDLSPLAGLTNLLELYLLDNMINYLSPLAGLTNLQYL 2362
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+IS + + L L+ L LG N+I + L GLTNL+EL L N+IS I+ LA L
Sbjct: 2363 DLGGNQISDLSPLAGLTNLQDLYLGWNQINYLSPLAGLTNLQELDLNNNQISNINPLAGL 2422
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T L L L N++ + L LTNL L L N ++ I L L+ LD+ N+IS +
Sbjct: 2423 TNLQKLYLYYNQISDLSPLSGLTNLQYLLLEYNQISNISPLAGLTNLQVLDLYSNQISDL 2482
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
+A LT L ++ NQ+SD + + L N LQ ++LD N
Sbjct: 2483 SPLAELTNLWYLDLSYNQISDLSPLVGLVN---LQGLWLDNN 2521
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 116/227 (51%), Gaps = 3/227 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I IE T L L L NQ++ + L L NL+ L+L N+I +I L L N+ L
Sbjct: 1694 IISIEGAQYFTNLDSLYLSYNQISNLNPLAGLTNLKGLNLGSNQISDINPLAGLTNISWL 1753
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L N IS I ++ L L+ L+L N+I I L L ++ + LG N+I I LA L
Sbjct: 1754 FLFGNYISNIAPLEGLYNLRNLQLHYNQISDITPLAALIDIGGIALGSNQIVDITPLAGL 1813
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T L L L N++ I+ L L NL LYL N + I L L L + N+I+ I
Sbjct: 1814 THLIGLELYHNQINNIDALSGLINLQWLYLDGNQIIDISPLAGLSILRELYLENNQINDI 1873
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
++ L LQ ++ +NQ+SD + + L N L + LD NP++ +
Sbjct: 1874 STLSELNNLQYLFLYNNQISDLSPLAGLTN---LWWLLLDGNPISYE 1917
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 105/189 (55%), Gaps = 1/189 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+++L L +N I + + LT L+ L L NQ++ I L L NL++LDL N+I ++
Sbjct: 2425 LQKLYLYYNQISDLSPLSGLTNLQYLLLEYNQISNISPLAGLTNLQVLDLYSNQISDLSP 2484
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL L L N+IS + + L L+ L L +N+I + L GLTNL+ L+L N+
Sbjct: 2485 LAELTNLWYLDLSYNQISDLSPLVGLVNLQGLWLDNNQINDLSPLIGLTNLQYLHLYYNQ 2544
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE-KLET 239
IS + L LT L+ L L N++ + ++E LTNL +LYL N ++ LL+ L
Sbjct: 2545 ISDLSPLTGLTNLHYLYLAYNQISDLSSVEGLTNLQELYLDYNPISYESMLLAQSWSLPW 2604
Query: 240 LDVAYNKIS 248
YN +S
Sbjct: 2605 STTTYNPLS 2613
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 99/184 (53%), Gaps = 1/184 (0%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L +N I + + LT L++L L NQ+ + L L NL++L+L N+I ++ L L
Sbjct: 3061 LSYNQISDLSPLAGLTNLQDLYLGWNQINYLSPLAGLTNLQVLNLYSNQISDLSPLAELT 3120
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL+ L+L N+IS + + L L L L N+I + L GLTNL+ L+L N+IS I
Sbjct: 3121 NLQYLHLYYNQISDLSPLTGLTNLHYLYLAYNQISDLSPLIGLTNLQYLHLYYNQISDIS 3180
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE-KLETLDVAY 244
LA LT L L L N++ + L LTNL L+L N ++ LL+ L +Y
Sbjct: 3181 PLAELTNLQYLWLDSNQISDLSPLAGLTNLWWLWLDGNPISYESMLLAQSWSLPWSTTSY 3240
Query: 245 NKIS 248
N +S
Sbjct: 3241 NPLS 3244
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 106/210 (50%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L +N I + + LT LK L L NQ++ I L L N+ L L N I I
Sbjct: 1706 LDSLYLSYNQISNLNPLAGLTNLKGLNLGSNQISDINPLAGLTNISWLFLFGNYISNIAP 1765
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L NL L L N+IS I + L + + LG N+I I L GLT+L L L N+
Sbjct: 1766 LEGLYNLRNLQLHYNQISDITPLAALIDIGGIALGSNQIVDITPLAGLTHLIGLELYHNQ 1825
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ ID L+ L L L L N++ I L L+ L +LYL N + I L L+ L
Sbjct: 1826 INNIDALSGLINLQWLYLDGNQIIDISPLAGLSILRELYLENNQINDISTLSELNNLQYL 1885
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVS 270
+ N+IS + +A LT L ++ N +S
Sbjct: 1886 FLYNNQISDLSPLAGLTNLWWLLLDGNPIS 1915
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N I I + L L+ L+L+ NQ++ I L LI++ + L N+I +I
Sbjct: 1750 ISWLFLFGNYISNIAPLEGLYNLRNLQLHYNQISDITPLAALIDIGGIALGSNQIVDITP 1809
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L +L L L N+I+ I+ + L L+ L L N+I I L GL+ L ELYL N+
Sbjct: 1810 LAGLTHLIGLELYHNQINNIDALSGLINLQWLYLDGNQIIDISPLAGLSILRELYLENNQ 1869
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE-KLET 239
I+ I L+ L L L L N++ + L LTNL L L N ++ LL+ L
Sbjct: 1870 INDISTLSELNNLQYLFLYNNQISDLSPLAGLTNLWWLLLDGNPISYESMLLAQSWSLPW 1929
Query: 240 LDVAYNKIS 248
+YN +S
Sbjct: 1930 STTSYNSLS 1938
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 86/178 (48%), Gaps = 8/178 (4%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I +++GL LY I IE + L L L N+I + L GLTNL+ L
Sbjct: 1677 IADLQGLTGY-----LYAEGRNIISIEGAQYFTNLDSLYLSYNQISNLNPLAGLTNLKGL 1731
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
LG N+IS I+ LA LT ++ L L N + I LE L NL L L N ++ I L +
Sbjct: 1732 NLGSNQISDINPLAGLTNISWLFLFGNYISNIAPLEGLYNLRNLQLHYNQISDITPLAAL 1791
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
+ + + N+I I +A LT L + NQ+ N ++ L LQ +YLD N
Sbjct: 1792 IDIGGIALGSNQIVDITPLAGLTHLIGLELYHNQI---NNIDALSGLINLQWLYLDGN 1846
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 91/181 (50%), Gaps = 25/181 (13%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G +L NL+ L L SN+IS + + L L L L DN I + L GLTNL+ L
Sbjct: 2303 IISIEGAQYLTNLQSLDLDSNQISDLSPLAGLTNLLELYLLDNMINYLSPLAGLTNLQYL 2362
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
LG N+IS + LA LTNL LYL N + + L
Sbjct: 2363 DLGGNQISDLSPLA----------------------GLTNLQDLYLGWNQINYLSPLAGL 2400
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
L+ LD+ N+IS I +A LT LQ+ ++ NQ+SD + ++ L N LQ + L+ N +
Sbjct: 2401 TNLQELDLNNNQISNINPLAGLTNLQKLYLYYNQISDLSPLSGLTN---LQYLLLEYNQI 2457
Query: 295 A 295
+
Sbjct: 2458 S 2458
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V ++ L L N I + + LT L+ L LY NQ++ + L L NL L L++N+I ++
Sbjct: 2511 VNLQGLWLDNNQINDLSPLIGLTNLQYLHLYYNQISDLSPLTGLTNLHYLYLAYNQISDL 2570
Query: 119 KGLDHLANLEKLYLCSNKIS 138
++ L NL++LYL N IS
Sbjct: 2571 SSVEGLTNLQELYLDYNPIS 2590
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%)
Query: 53 DEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSF 112
D S + ++ L L N I I + L+ L+EL L +NQ+ I L L NL+ L L
Sbjct: 1830 DALSGLINLQWLYLDGNQIIDISPLAGLSILRELYLENNQINDISTLSELNNLQYLFLYN 1889
Query: 113 NRIREIKGLDHLANLEKLYLCSNKIS 138
N+I ++ L L NL L L N IS
Sbjct: 1890 NQISDLSPLAGLTNLWWLLLDGNPIS 1915
>gi|399218953|emb|CCF75840.1| unnamed protein product [Babesia microti strain RI]
Length = 309
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 125/299 (41%), Positives = 179/299 (59%), Gaps = 20/299 (6%)
Query: 32 QMSLDNPDEESEAETTESKAEDEESKEVC--IERLLLRWNLIKKIENIHMLTTLKELELY 89
++ +D+ DE E + SK + + C +++L L N I KIEN+ L+ L+LY
Sbjct: 10 ELEVDSCDESVEVQC--SKVSRIANLDRCRKLKKLALISNRIIKIENLTHNLLLEHLDLY 67
Query: 90 DNQLTVIENLDTLINLE-------ILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
N++ VIENL L L ILDLSFN I EIKGL+ L LE+LYL SNKI++I+
Sbjct: 68 QNKIEVIENLGHLTKLRYTDCLRRILDLSFNEITEIKGLEGLEMLEELYLSSNKITEIKG 127
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D+ L LELG+NKIR IE LD L L+ L+LGKNKI+ + L L L LSLQ NR
Sbjct: 128 LDNCLNLTALELGNNKIRKIEGLDKLLKLKSLWLGKNKITSMK-LPHLPCLERLSLQNNR 186
Query: 203 LRTIE-NLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
L+ + + LTNL +LYLS N L+ N LS L+ +D+ N+I+ + +A + +L E
Sbjct: 187 LKEWDMGITKLTNLCELYLSHNMLSNPPN-LSQMALKIVDLGNNEITRLDELAKI-DLVE 244
Query: 262 FWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ--DPNYRRKIKLVCPWIVQIDATL 318
W+N+N + + +N + K+LQ +YL+ NPV P+YR +I C I Q+DA +
Sbjct: 245 LWLNNNFIDNIEPLNDM---KKLQVLYLEGNPVQHRLGPSYRNQILQCCTTISQLDANI 300
>gi|156084688|ref|XP_001609827.1| protein phosphatase 1, regulatory (inhibitor) subunit 7 [Babesia
bovis T2Bo]
gi|154797079|gb|EDO06259.1| protein phosphatase 1, regulatory (inhibitor) subunit 7, putative
[Babesia bovis]
Length = 259
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 145/241 (60%), Gaps = 6/241 (2%)
Query: 35 LDNPDEESEAETTESKAEDEESKEVC--IERLLLRWNLIKKIENIHMLTTLKELELYDNQ 92
L+ P E S E + + E+ E C +++L + NL++KIE + T L+ L+LY N
Sbjct: 16 LEAPSESSVIEFHCERIKRIENLERCTALKKLAIVSNLVEKIEKLDSNTALETLDLYQNN 75
Query: 93 LTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVL 152
+ +IEN+ L L +LD+SFN+I I+ L+ L NL +LYL +NKI+ +EN+ LK+L++L
Sbjct: 76 IKIIENIGHLHALRVLDVSFNQIEVIENLESLINLRELYLTNNKIATVENLCMLKQLELL 135
Query: 153 ELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEA- 211
ELG N+IR ++ LT L+ L+LG+NKI+ + + L LN LSLQ NR+ T + A
Sbjct: 136 ELGSNRIREYGDIGALTALKSLWLGRNKITSMQ-VPPLPMLNKLSLQNNRIDTWDERLAT 194
Query: 212 -LTNLTQLYLSENGLTTIENLLSNEK-LETLDVAYNKISIIQNIAHLTELQEFWINDNQV 269
L++LYLS NGL + ++ K L+ LD+ N+IS I ++E W++
Sbjct: 195 GCPMLSELYLSFNGLKEVPAWINTMKMLKILDLGNNQISKINITEDNIYIEELWLSQPSA 254
Query: 270 S 270
S
Sbjct: 255 S 255
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 22/143 (15%)
Query: 151 VLELGDNKIRIIEN----------------------LDGLTNLEELYLGKNKISRIDNLA 188
V+E +I+ IEN LD T LE L L +N I I+N+
Sbjct: 24 VIEFHCERIKRIENLERCTALKKLAIVSNLVEKIEKLDSNTALETLDLYQNNIKIIENIG 83
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
L L +L + N++ IENLE+L NL +LYL+ N + T+ENL ++LE L++ N+I
Sbjct: 84 HLHALRVLDVSFNQIEVIENLESLINLRELYLTNNKIATVENLCMLKQLELLELGSNRIR 143
Query: 249 IIQNIAHLTELQEFWINDNQVSD 271
+I LT L+ W+ N+++
Sbjct: 144 EYGDIGALTALKSLWLGRNKITS 166
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
Query: 180 KISRID-NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
+I RI +L + ++ +++ C R++ IENLE T L +L + N + IE L SN LE
Sbjct: 8 RIQRIGVDLEAPSESSVIEFHCERIKRIENLERCTALKKLAIVSNLVEKIEKLDSNTALE 67
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
TLD+ N I II+NI HL L+ ++ NQ+ + LE+ L+ +YL N +A
Sbjct: 68 TLDLYQNNIKIIENIGHLHALRVLDVSFNQIE---VIENLESLINLRELYLTNNKIA 121
>gi|300867094|ref|ZP_07111761.1| Leucine Rich Repeat domain protein (fragment) [Oscillatoria sp. PCC
6506]
gi|300334925|emb|CBN56927.1| Leucine Rich Repeat domain protein (fragment) [Oscillatoria sp. PCC
6506]
Length = 334
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 154/288 (53%), Gaps = 16/288 (5%)
Query: 20 LNVEAVENTHGNQMSLD--------NPDEESEAETTESKAEDEESKEV-----CIERLLL 66
L V A E GN+ D +P+ + E KAE E + + L L
Sbjct: 32 LGVLAAETQFGNRTFADWCRDRTSLSPEAKHTVEVLLEKAETTECEAANQTLSSLTALYL 91
Query: 67 RWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLAN 126
N I ++ + LT L L+L DNQ++ I+ L +L L +L L N+I +IK L+ L N
Sbjct: 92 YNNQISDLKPLQSLTNLTWLDLNDNQISDIKPLQSLTKLNVLILHSNKISDIKPLESLTN 151
Query: 127 LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDN 186
L L L SNKIS I+ ++ L L +LEL +NKI I+ L LT L L L N+I I
Sbjct: 152 LTSLSLYSNKISDIKPLESLTNLDLLELHNNKISDIKPLQSLTKLNLLQLHNNQIGDIKP 211
Query: 187 LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK 246
L SLT L LSL N++ I L++LTNLT L LS N ++ I+ L KL LD++ NK
Sbjct: 212 LQSLTNLTSLSLYSNKISDITLLQSLTNLTILDLSNNKISDIKPLEFLTKLNILDLSNNK 271
Query: 247 ISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
IS I+ + LT+L ++ +NQ+SD T+ L +L +YL N +
Sbjct: 272 ISDIEPLQSLTKLTILYLYNNQISDIKTLKSLT---KLMLLYLGGNSI 316
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 103/177 (58%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L L N I I+ + LT L LEL++N+++ I+ L +L L +L L N+I +IK
Sbjct: 152 LTSLSLYSNKISDIKPLESLTNLDLLELHNNKISDIKPLQSLTKLNLLQLHNNQIGDIKP 211
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL L L SNKIS I + L L +L+L +NKI I+ L+ LT L L L NK
Sbjct: 212 LQSLTNLTSLSLYSNKISDITLLQSLTNLTILDLSNNKISDIKPLEFLTKLNILDLSNNK 271
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
IS I+ L SLTKL IL L N++ I+ L++LT L LYL N + T LS E +
Sbjct: 272 ISDIEPLQSLTKLTILYLYNNQISDIKTLKSLTKLMLLYLGGNSIDTKTCPLSPESI 328
>gi|334119190|ref|ZP_08493277.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
gi|333458661|gb|EGK87278.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
Length = 489
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 142/235 (60%), Gaps = 3/235 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ +L L N IK I+ + LT L +L L++ +++ I+ L +L NL LDLS N+ +IK
Sbjct: 132 LTKLYLGNNKIKDIKPLQSLTNLTQLGLHNTRISDIKPLQSLTNLTKLDLSNNKTLDIKP 191
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL KLYL +NKI I+ ++ L L L+L N+I+ I+ L+ LTNL L+L N+
Sbjct: 192 LQSLTNLTKLYLDNNKIKDIKPLESLTNLTHLQLMSNQIKDIKPLESLTNLTSLHLYNNQ 251
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS I L SLTKL L L N++ I+ L++LTNLT++ L N ++ I+ L S L +L
Sbjct: 252 ISDIKPLESLTKLTWLWLDNNKISDIKPLKSLTNLTEIKLGSNKISDIKPLESLTNLTSL 311
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+ N+IS I+ + LT+L W+ +NQ+SD + LE+ L I L N ++
Sbjct: 312 YLHNNQISDIKPLESLTKLTSLWLINNQISD---IKPLESLTNLTGIVLSNNRIS 363
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 147/269 (54%), Gaps = 5/269 (1%)
Query: 44 AETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLI 103
AETTE + K IE L L I I+ + LT L L L DNQ+ I+ L++L
Sbjct: 73 AETTECDVAYQ--KLSSIEELYLNDKKINDIKPLESLTNLTGLVLSDNQINDIKPLESLT 130
Query: 104 NLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE 163
NL L L N+I++IK L L NL +L L + +IS I+ + L L L+L +NK I+
Sbjct: 131 NLTKLYLGNNKIKDIKPLQSLTNLTQLGLHNTRISDIKPLQSLTNLTKLDLSNNKTLDIK 190
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
L LTNL +LYL NKI I L SLT L L L N+++ I+ LE+LTNLT L+L N
Sbjct: 191 PLQSLTNLTKLYLDNNKIKDIKPLESLTNLTHLQLMSNQIKDIKPLESLTNLTSLHLYNN 250
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
++ I+ L S KL L + NKIS I+ + LT L E + N++SD + LE+
Sbjct: 251 QISDIKPLESLTKLTWLWLDNNKISDIKPLKSLTNLTEIKLGSNKISD---IKPLESLTN 307
Query: 284 LQTIYLDRNPVAQDPNYRRKIKLVCPWIV 312
L ++YL N ++ KL W++
Sbjct: 308 LTSLYLHNNQISDIKPLESLTKLTSLWLI 336
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 125/211 (59%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ +L L N IK I+ + LT L L+L NQ+ I+ L++L NL L L N+I +IK
Sbjct: 198 LTKLYLDNNKIKDIKPLESLTNLTHLQLMSNQIKDIKPLESLTNLTSLHLYNNQISDIKP 257
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L L L+L +NKIS I+ + L L ++LG NKI I+ L+ LTNL LYL N+
Sbjct: 258 LESLTKLTWLWLDNNKISDIKPLKSLTNLTEIKLGSNKISDIKPLESLTNLTSLYLHNNQ 317
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS I L SLTKL L L N++ I+ LE+LTNLT + LS N ++ I+ L S KL L
Sbjct: 318 ISDIKPLESLTKLTSLWLINNQISDIKPLESLTNLTGIVLSNNRISDIKPLESLNKLTLL 377
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ N+IS I+ + LT L + NQ+ D
Sbjct: 378 ALTNNQISDIKPLESLTNLTGIVLMSNQIQD 408
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 125/207 (60%)
Query: 74 IENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLC 133
I+ + LT L +L L +N++ I+ L++L NL L L N+I++IK L+ L NL L+L
Sbjct: 189 IKPLQSLTNLTKLYLDNNKIKDIKPLESLTNLTHLQLMSNQIKDIKPLESLTNLTSLHLY 248
Query: 134 SNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKL 193
+N+IS I+ ++ L KL L L +NKI I+ L LTNL E+ LG NKIS I L SLT L
Sbjct: 249 NNQISDIKPLESLTKLTWLWLDNNKISDIKPLKSLTNLTEIKLGSNKISDIKPLESLTNL 308
Query: 194 NILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNI 253
L L N++ I+ LE+LT LT L+L N ++ I+ L S L + ++ N+IS I+ +
Sbjct: 309 TSLYLHNNQISDIKPLESLTKLTSLWLINNQISDIKPLESLTNLTGIVLSNNRISDIKPL 368
Query: 254 AHLTELQEFWINDNQVSDWNTVNVLEN 280
L +L + +NQ+SD + L N
Sbjct: 369 ESLNKLTLLALTNNQISDIKPLESLTN 395
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 136/242 (56%), Gaps = 4/242 (1%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I I+ + LT L L L +N+++ I+ L +L NL + L N+I +IK L+ L NL
Sbjct: 250 NQISDIKPLESLTKLTWLWLDNNKISDIKPLKSLTNLTEIKLGSNKISDIKPLESLTNLT 309
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
LYL +N+IS I+ ++ L KL L L +N+I I+ L+ LTNL + L N+IS I L
Sbjct: 310 SLYLHNNQISDIKPLESLTKLTSLWLINNQISDIKPLESLTNLTGIVLSNNRISDIKPLE 369
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
SL KL +L+L N++ I+ LE+LTNLT + L N + I+ L S L L + NKIS
Sbjct: 370 SLNKLTLLALTNNQISDIKPLESLTNLTGIVLMSNQIQDIKPLQSLTNLTLLALTNNKIS 429
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVC 308
I+ + LT L + NQ+SD + LE+ L I L NP+A K + +C
Sbjct: 430 DIKPLQSLTNLTLLSLEKNQISD---IKPLESLTNLTEIRLSGNPIAPK-TCPIKPESIC 485
Query: 309 PW 310
W
Sbjct: 486 NW 487
>gi|241598404|ref|XP_002404744.1| protein phosphatases pp1 regulatory subunit, putative [Ixodes
scapularis]
gi|215500469|gb|EEC09963.1| protein phosphatases pp1 regulatory subunit, putative [Ixodes
scapularis]
Length = 128
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 85/124 (68%)
Query: 196 LSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAH 255
++LQ NR+ +E LE L LY+S NG+ IENL +N KLETLD+A N+I ++NI H
Sbjct: 3 ITLQSNRIVKLEGLEKNRELCHLYISHNGIEQIENLENNIKLETLDLAANRIKHLKNIDH 62
Query: 256 LTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQID 315
L ++EFW NDNQ+ + + VL++ +L T+YL NP+ ++P YRRKI +V P + QID
Sbjct: 63 LVNIEEFWFNDNQIESFEEIEVLKHFPKLATVYLANNPIEKNPMYRRKIMMVSPTVTQID 122
Query: 316 ATLA 319
AT+
Sbjct: 123 ATMC 126
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L+ N I K+E + L L + N + IENL+ I LE LDL+ NRI+ +K +DHL
Sbjct: 5 LQSNRIVKLEGLEKNRELCHLYISHNGIEQIENLENNIKLETLDLAANRIKHLKNIDHLV 64
Query: 126 NLEKLYLCSNKISKIENVD---HLKKLKVLELGDNKI 159
N+E+ + N+I E ++ H KL + L +N I
Sbjct: 65 NIEEFWFNDNQIESFEEIEVLKHFPKLATVYLANNPI 101
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%)
Query: 108 LDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG 167
+ L NRI +++GL+ L LY+ N I +IEN+++ KL+ L+L N+I+ ++N+D
Sbjct: 3 ITLQSNRIVKLEGLEKNRELCHLYISHNGIEQIENLENNIKLETLDLAANRIKHLKNIDH 62
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILS 197
L N+EE + N+I + + L L+
Sbjct: 63 LVNIEEFWFNDNQIESFEEIEVLKHFPKLA 92
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 88 LYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLK 147
L N++ +E L+ L L +S N I +I+ L++ LE L L +N+I ++N+DHL
Sbjct: 5 LQSNRIVKLEGLEKNRELCHLYISHNGIEQIENLENNIKLETLDLAANRIKHLKNIDHLV 64
Query: 148 KLKVLELGDNKIRIIENLDGLTNLEEL---YLGKNKISR 183
++ DN+I E ++ L + +L YL N I +
Sbjct: 65 NIEEFWFNDNQIESFEEIEVLKHFPKLATVYLANNPIEK 103
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 54 EESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFN 113
E+++E+C L + N I++IEN+ L+ L+L N++ ++N+D L+N+E + N
Sbjct: 17 EKNRELC--HLYISHNGIEQIENLENNIKLETLDLAANRIKHLKNIDHLVNIEEFWFNDN 74
Query: 114 RIR---EIKGLDHLANLEKLYLCSNKISK 139
+I EI+ L H L +YL +N I K
Sbjct: 75 QIESFEEIEVLKHFPKLATVYLANNPIEK 103
>gi|323308308|gb|EGA61554.1| Sds22p [Saccharomyces cerevisiae FostersO]
Length = 227
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 102/151 (67%), Gaps = 5/151 (3%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLK--ELELYDNQLTVIE-NLDTLINLEILDLSFNRIRE 117
+++L LR NLI+ I + +L K +L+ YDN++ I N++ L L LDLSFN+I+
Sbjct: 68 LKQLCLRQNLIESISEVEVLPHDKIVDLDFYDNKIKHISSNVNKLTKLTSLDLSFNKIKH 127
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE--NLDGLTNLEELY 175
IK L++L +LE LY N ISKIEN+ LK LK LELG NK+ IE + +GL+NLEE++
Sbjct: 128 IKNLENLTDLENLYFVQNSISKIENLSTLKSLKNLELGGNKVHSIEPDSFEGLSNLEEIW 187
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTI 206
LGKN I R+ NL L L ILS+Q N+L+ I
Sbjct: 188 LGKNSIPRLINLHPLKNLKILSIQSNKLKKI 218
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 27/183 (14%)
Query: 104 NLEILDLSFNRIREIKGLD--HLANLEKLYLCSNKISKIENVDHLKKLKVLELG--DNKI 159
++E++DL +I+ ++ L+ NL++L L N I I V+ L K+++L DNKI
Sbjct: 43 DVEVIDLVHLKIKSLEDLNLYRFKNLKQLCLRQNLIESISEVEVLPHDKIVDLDFYDNKI 102
Query: 160 RIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLY 219
+ I + N+ LTKL L L N+++ I+NLE LT+L LY
Sbjct: 103 KHISS---------------------NVNKLTKLTSLDLSFNKIKHIKNLENLTDLENLY 141
Query: 220 LSENGLTTIENLLSNEKLETLDVAYNKISIIQ--NIAHLTELQEFWINDNQVSDWNTVNV 277
+N ++ IENL + + L+ L++ NK+ I+ + L+ L+E W+ N + ++
Sbjct: 142 FVQNSISKIENLSTLKSLKNLELGGNKVHSIEPDSFEGLSNLEEIWLGKNSIPRLINLHP 201
Query: 278 LEN 280
L+N
Sbjct: 202 LKN 204
>gi|434405931|ref|YP_007148816.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
gi|428260186|gb|AFZ26136.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
Length = 451
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 142/247 (57%), Gaps = 14/247 (5%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L +N I I+ + LT L L L++NQ+ I+ L L NL L L N+I +IK L +L
Sbjct: 210 LGYNQISDIKVLSNLTNLTYLSLWNNQIGDIKVLSNLTNLTSLSLWDNQISDIKPLSNLT 269
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL LYL N+IS I+ + +L L L L DN+I I+ L LTNL +L L KN+I I
Sbjct: 270 NLTSLYLWDNQISDIKPLSNLTNLTYLYLWDNQIADIKPLSNLTNLTDLDLSKNQIGDIK 329
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN-EKLETLDVAY 244
L++LT L L L N++ I+ L LTNLT L L N IE LLSN L +LD++
Sbjct: 330 PLSNLTSLTSLDLSKNQIADIKPLSNLTNLTSLSLWRNQSIDIE-LLSNLTNLTSLDLSE 388
Query: 245 NKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKI 304
N+IS I+ +++LT L + +++NQ+SD + L N +L+ + + NP+ +
Sbjct: 389 NQISDIKPLSNLTNLTDIDLSENQISD---IKPLSNLTKLEDLQIQNNPI---------L 436
Query: 305 KLVCPWI 311
+CP+I
Sbjct: 437 DKICPFI 443
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 134/225 (59%), Gaps = 3/225 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I I+ + LT L L+L +NQ++ I+ L L NL +DLS N+I +IK L +L NL +
Sbjct: 83 ISDIKPLSNLTNLTTLDLSENQISDIKPLSNLTNLTDIDLSSNQISDIKVLSNLTNLTDI 142
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+IS I+ + +L L VL+L DN+I I+ L LTNL + L +N+IS I+ L++L
Sbjct: 143 DLSKNQISDIKVLSNLTNLTVLDLSDNQISDIKVLSNLTNLTSVKLSENQISDIEVLSNL 202
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T L +L L N++ I+ L LTNLT L L N + I+ L + L +L + N+IS I
Sbjct: 203 TNLTVLDLGYNQISDIKVLSNLTNLTYLSLWNNQIGDIKVLSNLTNLTSLSLWDNQISDI 262
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+ +++LT L ++ DNQ+SD + L N L +YL N +A
Sbjct: 263 KPLSNLTNLTSLYLWDNQISD---IKPLSNLTNLTYLYLWDNQIA 304
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 3/230 (1%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I I+ + LT L +++L NQ++ I+ L L NL +LDLS N+I +IK L +L
Sbjct: 122 LSSNQISDIKVLSNLTNLTDIDLSKNQISDIKVLSNLTNLTVLDLSDNQISDIKVLSNLT 181
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL + L N+IS IE + +L L VL+LG N+I I+ L LTNL L L N+I I
Sbjct: 182 NLTSVKLSENQISDIEVLSNLTNLTVLDLGYNQISDIKVLSNLTNLTYLSLWNNQIGDIK 241
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L++LT L LSL N++ I+ L LTNLT LYL +N ++ I+ L + L L + N
Sbjct: 242 VLSNLTNLTSLSLWDNQISDIKPLSNLTNLTSLYLWDNQISDIKPLSNLTNLTYLYLWDN 301
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+I+ I+ +++LT L + ++ NQ+ D + L N L ++ L +N +A
Sbjct: 302 QIADIKPLSNLTNLTDLDLSKNQIGD---IKPLSNLTSLTSLDLSKNQIA 348
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 134/227 (59%), Gaps = 3/227 (1%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I I+ + LT L +++L NQ++ I+ L L NL +DLS N+I +IK L +L NL
Sbjct: 103 NQISDIKPLSNLTNLTDIDLSSNQISDIKVLSNLTNLTDIDLSKNQISDIKVLSNLTNLT 162
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
L L N+IS I+ + +L L ++L +N+I IE L LTNL L LG N+IS I L+
Sbjct: 163 VLDLSDNQISDIKVLSNLTNLTSVKLSENQISDIEVLSNLTNLTVLDLGYNQISDIKVLS 222
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
+LT L LSL N++ I+ L LTNLT L L +N ++ I+ L + L +L + N+IS
Sbjct: 223 NLTNLTYLSLWNNQIGDIKVLSNLTNLTSLSLWDNQISDIKPLSNLTNLTSLYLWDNQIS 282
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
I+ +++LT L ++ DNQ++D + L N L + L +N +
Sbjct: 283 DIKPLSNLTNLTYLYLWDNQIAD---IKPLSNLTNLTDLDLSKNQIG 326
>gi|428304096|ref|YP_007140921.1| hypothetical protein Cri9333_0441 [Crinalium epipsammum PCC 9333]
gi|428245631|gb|AFZ11411.1| leucine-rich repeat-containing protein [Crinalium epipsammum PCC
9333]
Length = 504
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 130/225 (57%), Gaps = 3/225 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +E I L L L L+ NQ++ ++ L +L L L+L N+I ++K L L NL +L
Sbjct: 81 ITSLEGIQALRNLTTLNLFANQISDVKPLRSLTKLTTLELVSNKISDVKPLFGLTNLNRL 140
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L NKIS ++ + L KL L+L DNKI +E L GLTNL L L +NK+S + L L
Sbjct: 141 DLSDNKISDVKPLTGLTKLTELDLSDNKISDVEPLFGLTNLGVLDLSRNKLSDLKPLWGL 200
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
TKL +L L N++ ++ L LT LT L LS+N ++ ++ L KL L + NKIS +
Sbjct: 201 TKLTMLLLNTNQISDLKPLANLTKLTTLDLSDNKISDVKPLTGLTKLTELALGDNKISDL 260
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+ + LT L E +N N++SD ++ L N + +++L N ++
Sbjct: 261 KPLLGLTNLTELVLNTNEISDVTSLTGLTN---ITSLHLGGNKIS 302
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 118/195 (60%)
Query: 77 IHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNK 136
+++L +K L + + ++T +E + L NL L+L N+I ++K L L L L L SNK
Sbjct: 65 LNILQGVKNLNISNAEITSLEGIQALRNLTTLNLFANQISDVKPLRSLTKLTTLELVSNK 124
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
IS ++ + L L L+L DNKI ++ L GLT L EL L NKIS ++ L LT L +L
Sbjct: 125 ISDVKPLFGLTNLNRLDLSDNKISDVKPLTGLTKLTELDLSDNKISDVEPLFGLTNLGVL 184
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
L N+L ++ L LT LT L L+ N ++ ++ L + KL TLD++ NKIS ++ + L
Sbjct: 185 DLSRNKLSDLKPLWGLTKLTMLLLNTNQISDLKPLANLTKLTTLDLSDNKISDVKPLTGL 244
Query: 257 TELQEFWINDNQVSD 271
T+L E + DN++SD
Sbjct: 245 TKLTELALGDNKISD 259
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 114/194 (58%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I ++ + LT L EL+L DN+++ +E L L NL +LDLS N++ ++K
Sbjct: 137 LNRLDLSDNKISDVKPLTGLTKLTELDLSDNKISDVEPLFGLTNLGVLDLSRNKLSDLKP 196
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L +N+IS ++ + +L KL L+L DNKI ++ L GLT L EL LG NK
Sbjct: 197 LWGLTKLTMLLLNTNQISDLKPLANLTKLTTLDLSDNKISDVKPLTGLTKLTELALGDNK 256
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L LT L L L N + + +L LTN+T L+L N ++ + +L KL L
Sbjct: 257 ISDLKPLLGLTNLTELVLNTNEISDVTSLTGLTNITSLHLGGNKISNVTSLTGLTKLAWL 316
Query: 241 DVAYNKISIIQNIA 254
+ NKI+ Q++
Sbjct: 317 YLGGNKINNCQSLP 330
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 131/239 (54%), Gaps = 3/239 (1%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I ++ + LT L LEL N+++ ++ L L NL LDLS N+I ++K L L L
Sbjct: 101 NQISDVKPLRSLTKLTTLELVSNKISDVKPLFGLTNLNRLDLSDNKISDVKPLTGLTKLT 160
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L L NKIS +E + L L VL+L NK+ ++ L GLT L L L N+IS + LA
Sbjct: 161 ELDLSDNKISDVEPLFGLTNLGVLDLSRNKLSDLKPLWGLTKLTMLLLNTNQISDLKPLA 220
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
+LTKL L L N++ ++ L LT LT+L L +N ++ ++ LL L L + N+IS
Sbjct: 221 NLTKLTTLDLSDNKISDVKPLTGLTKLTELALGDNKISDLKPLLGLTNLTELVLNTNEIS 280
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLV 307
+ ++ LT + + N++S+ V L +L +YL N + + +K++L
Sbjct: 281 DVTSLTGLTNITSLHLGGNKISN---VTSLTGLTKLAWLYLGGNKINNCQSLPKKLRLA 336
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
LLL N I ++ + LT L L+L DN+++ ++ L L L L L N+I ++K L
Sbjct: 206 LLLNTNQISDLKPLANLTKLTTLDLSDNKISDVKPLTGLTKLTELALGDNKISDLKPLLG 265
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL +L L +N+IS + ++ L + L LG NKI + +L GLT L LYLG NK
Sbjct: 266 LTNLTELVLNTNEISDVTSLTGLTNITSLHLGGNKISNVTSLTGLTKLAWLYLGGNK--- 322
Query: 184 IDNLASLTK 192
I+N SL K
Sbjct: 323 INNCQSLPK 331
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
+NK ++ L + LNI + + L I+ L LT L L N ++ ++ L S KL
Sbjct: 59 RNKPLTLNILQGVKNLNISNAEITSLEGIQALRNLTTLN---LFANQISDVKPLRSLTKL 115
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
TL++ NKIS ++ + LT L ++DN++SD
Sbjct: 116 TTLELVSNKISDVKPLFGLTNLNRLDLSDNKISD 149
>gi|334117579|ref|ZP_08491670.1| Adenylate cyclase [Microcoleus vaginatus FGP-2]
gi|333460688|gb|EGK89296.1| Adenylate cyclase [Microcoleus vaginatus FGP-2]
Length = 516
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 129/245 (52%), Gaps = 4/245 (1%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
LR +I I+ + LT L +L L DNQ+ I+ L +L NL L LS N+IR+IK L L
Sbjct: 270 LRRIVIGDIKPLASLTNLTDLSLDDNQIGDIKPLASLTNLTRLVLSSNQIRDIKPLASLT 329
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL L L N I I+ + L L L+L +NKI I+ L LT L EL L N I I
Sbjct: 330 NLSSLDLSGNVIGDIKPLASLTNLSSLDLNNNKIGDIKPLASLTKLTELTLSGNVIGDIK 389
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
LASLT L+ L L N + I+ L +LTNL+ L L N + I+ L S L L ++ N
Sbjct: 390 PLASLTNLSSLVLFGNVIGDIKPLASLTNLSSLVLDGNVIGDIKALASLTNLAGLFLSSN 449
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIK 305
I I+ +A LT L ++DN + D + L N L ++L NP+A K +
Sbjct: 450 VIGDIKPLASLTNLSSLDLSDNHIGDIKPLASLTN---LIELHLSGNPIAPK-TCPLKPE 505
Query: 306 LVCPW 310
+C W
Sbjct: 506 SICKW 510
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 115/203 (56%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I I+ + LT L +L L NQ+ I+ L +L NL LDL N I +IK L L NL
Sbjct: 163 NKIGDIKPLASLTNLTDLVLSSNQVGDIKPLASLTNLTRLDLDGNVIGDIKPLASLTNLT 222
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L L N I I+ + L L L+L DN+I I+ L LTNL L L + I I LA
Sbjct: 223 RLDLDGNVIGDIKPLASLTNLSSLDLDDNQIGDIKPLASLTNLMGLDLRRIVIGDIKPLA 282
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
SLT L LSL N++ I+ L +LTNLT+L LS N + I+ L S L +LD++ N I
Sbjct: 283 SLTNLTDLSLDDNQIGDIKPLASLTNLTRLVLSSNQIRDIKPLASLTNLSSLDLSGNVIG 342
Query: 249 IIQNIAHLTELQEFWINDNQVSD 271
I+ +A LT L +N+N++ D
Sbjct: 343 DIKPLASLTNLSSLDLNNNKIGD 365
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 123/235 (52%), Gaps = 3/235 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N+I I+ + LT L L+L DNQ+ I+ L +L NL LDL I +IK
Sbjct: 221 LTRLDLDGNVIGDIKPLASLTNLSSLDLDDNQIGDIKPLASLTNLMGLDLRRIVIGDIKP 280
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL L L N+I I+ + L L L L N+IR I+ L LTNL L L N
Sbjct: 281 LASLTNLTDLSLDDNQIGDIKPLASLTNLTRLVLSSNQIRDIKPLASLTNLSSLDLSGNV 340
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I I LASLT L+ L L N++ I+ L +LT LT+L LS N + I+ L S L +L
Sbjct: 341 IGDIKPLASLTNLSSLDLNNNKIGDIKPLASLTKLTELTLSGNVIGDIKPLASLTNLSSL 400
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+ N I I+ +A LT L ++ N + D + L N L ++L N +
Sbjct: 401 VLFGNVIGDIKPLASLTNLSSLVLDGNVIGDIKALASLTN---LAGLFLSSNVIG 452
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 120/229 (52%), Gaps = 9/229 (3%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L++L EL L N + I L +L NL +LDL FN + +IK L L NL +L L N+I
Sbjct: 86 LSSLTELFLSGNVIGDITPLASLTNLTVLDLGFNALGDIKPLASLTNLTRLNLFGNQIGD 145
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I+ + L KL L L +NKI I+ L LTNL +L L N++ I LASLT L L L
Sbjct: 146 IKPLASLTKLTELTLNNNKIGDIKPLASLTNLTDLVLSSNQVGDIKPLASLTNLTRLDLD 205
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N + I+ L +LTNLT+L L N + I+ L S L +LD+ N+I I+ +A LT L
Sbjct: 206 GNVIGDIKPLASLTNLTRLDLDGNVIGDIKPLASLTNLSSLDLDDNQIGDIKPLASLTNL 265
Query: 260 QEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN------PVAQDPNYRR 302
+ + D + L N L + LD N P+A N R
Sbjct: 266 MGLDLRRIVIGDIKPLASLTN---LTDLSLDDNQIGDIKPLASLTNLTR 311
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 118/217 (54%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L+L N + I+ + LT L L+L N + I+ L +L NL LDL N I +IK L
Sbjct: 180 LVLSSNQVGDIKPLASLTNLTRLDLDGNVIGDIKPLASLTNLTRLDLDGNVIGDIKPLAS 239
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL L L N+I I+ + L L L+L I I+ L LTNL +L L N+I
Sbjct: 240 LTNLSSLDLDDNQIGDIKPLASLTNLMGLDLRRIVIGDIKPLASLTNLTDLSLDDNQIGD 299
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I LASLT L L L N++R I+ L +LTNL+ L LS N + I+ L S L +LD+
Sbjct: 300 IKPLASLTNLTRLVLSSNQIRDIKPLASLTNLSSLDLSGNVIGDIKPLASLTNLSSLDLN 359
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
NKI I+ +A LT+L E ++ N + D + L N
Sbjct: 360 NNKIGDIKPLASLTKLTELTLSGNVIGDIKPLASLTN 396
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 122/238 (51%), Gaps = 2/238 (0%)
Query: 43 EAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTL 102
+A T + A D K + L L N+I I + LT L L+L N L I+ L +L
Sbjct: 73 QAGTNDCDAADR--KLSSLTELFLSGNVIGDITPLASLTNLTVLDLGFNALGDIKPLASL 130
Query: 103 INLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII 162
NL L+L N+I +IK L L L +L L +NKI I+ + L L L L N++ I
Sbjct: 131 TNLTRLNLFGNQIGDIKPLASLTKLTELTLNNNKIGDIKPLASLTNLTDLVLSSNQVGDI 190
Query: 163 ENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSE 222
+ L LTNL L L N I I LASLT L L L N + I+ L +LTNL+ L L +
Sbjct: 191 KPLASLTNLTRLDLDGNVIGDIKPLASLTNLTRLDLDGNVIGDIKPLASLTNLSSLDLDD 250
Query: 223 NGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
N + I+ L S L LD+ I I+ +A LT L + ++DNQ+ D + L N
Sbjct: 251 NQIGDIKPLASLTNLMGLDLRRIVIGDIKPLASLTNLTDLSLDDNQIGDIKPLASLTN 308
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 122/235 (51%), Gaps = 3/235 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N+I I+ + LT L L+L N + I+ L +L NL LDL N+I +IK
Sbjct: 199 LTRLDLDGNVIGDIKPLASLTNLTRLDLDGNVIGDIKPLASLTNLSSLDLDDNQIGDIKP 258
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL L L I I+ + L L L L DN+I I+ L LTNL L L N+
Sbjct: 259 LASLTNLMGLDLRRIVIGDIKPLASLTNLTDLSLDDNQIGDIKPLASLTNLTRLVLSSNQ 318
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I I LASLT L+ L L N + I+ L +LTNL+ L L+ N + I+ L S KL L
Sbjct: 319 IRDIKPLASLTNLSSLDLSGNVIGDIKPLASLTNLSSLDLNNNKIGDIKPLASLTKLTEL 378
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
++ N I I+ +A LT L + N + D + L N L ++ LD N +
Sbjct: 379 TLSGNVIGDIKPLASLTNLSSLVLFGNVIGDIKPLASLTN---LSSLVLDGNVIG 430
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 112/215 (52%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L +N + I+ + LT L L L+ NQ+ I+ L +L L L L+ N+I +IK L L
Sbjct: 116 LGFNALGDIKPLASLTNLTRLNLFGNQIGDIKPLASLTKLTELTLNNNKIGDIKPLASLT 175
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL L L SN++ I+ + L L L+L N I I+ L LTNL L L N I I
Sbjct: 176 NLTDLVLSSNQVGDIKPLASLTNLTRLDLDGNVIGDIKPLASLTNLTRLDLDGNVIGDIK 235
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
LASLT L+ L L N++ I+ L +LTNL L L + I+ L S L L + N
Sbjct: 236 PLASLTNLSSLDLDDNQIGDIKPLASLTNLMGLDLRRIVIGDIKPLASLTNLTDLSLDDN 295
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+I I+ +A LT L ++ NQ+ D + L N
Sbjct: 296 QIGDIKPLASLTNLTRLVLSSNQIRDIKPLASLTN 330
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 117/220 (53%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I+ + LT L EL L +N++ I+ L +L NL L LS N++ +IK
Sbjct: 133 LTRLNLFGNQIGDIKPLASLTKLTELTLNNNKIGDIKPLASLTNLTDLVLSSNQVGDIKP 192
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL +L L N I I+ + L L L+L N I I+ L LTNL L L N+
Sbjct: 193 LASLTNLTRLDLDGNVIGDIKPLASLTNLTRLDLDGNVIGDIKPLASLTNLSSLDLDDNQ 252
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I I LASLT L L L+ + I+ L +LTNLT L L +N + I+ L S L L
Sbjct: 253 IGDIKPLASLTNLMGLDLRRIVIGDIKPLASLTNLTDLSLDDNQIGDIKPLASLTNLTRL 312
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
++ N+I I+ +A LT L ++ N + D + L N
Sbjct: 313 VLSSNQIRDIKPLASLTNLSSLDLSGNVIGDIKPLASLTN 352
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 101/188 (53%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL+L N I+ I+ + LT L L+L N + I+ L +L NL LDL+ N+I +IK
Sbjct: 309 LTRLVLSSNQIRDIKPLASLTNLSSLDLSGNVIGDIKPLASLTNLSSLDLNNNKIGDIKP 368
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L +L L N I I+ + L L L L N I I+ L LTNL L L N
Sbjct: 369 LASLTKLTELTLSGNVIGDIKPLASLTNLSSLVLFGNVIGDIKPLASLTNLSSLVLDGNV 428
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I I LASLT L L L N + I+ L +LTNL+ L LS+N + I+ L S L L
Sbjct: 429 IGDIKALASLTNLAGLFLSSNVIGDIKPLASLTNLSSLDLSDNHIGDIKPLASLTNLIEL 488
Query: 241 DVAYNKIS 248
++ N I+
Sbjct: 489 HLSGNPIA 496
>gi|254416421|ref|ZP_05030174.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196176859|gb|EDX71870.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 477
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 121/210 (57%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I I + LT+L L LY NQ+T I +L L +L +L LS N+I +I L L NL+ L
Sbjct: 198 ITDISPLSGLTSLTVLILYSNQITDISSLSGLTSLTVLILSDNQITDISPLSGLTNLDAL 257
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
YL +N+I+ I + L L L L +N+I I L GLTNL+ LYL N+I+ I L+ L
Sbjct: 258 YLNNNQITDISPLSGLTNLDALYLNNNQITDISPLSGLTNLDALYLNNNQITDISPLSGL 317
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T L+ L L N++ I L LTNL LYL+ N +T I LL L L + N+I+ I
Sbjct: 318 TNLDALYLNSNQITDISLLSGLTNLDALYLNSNQITDISPLLELTNLNYLILDNNQITDI 377
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
++ LT L +++NQ++D + ++ L N
Sbjct: 378 SPLSGLTNLTILILDNNQITDISPLSGLTN 407
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 132/254 (51%), Gaps = 12/254 (4%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
S + L+L N I I + LT L L L +NQ+T I L L NL+ L L+ N+I
Sbjct: 227 SGLTSLTVLILSDNQITDISPLSGLTNLDALYLNNNQITDISPLSGLTNLDALYLNNNQI 286
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
+I L L NL+ LYL +N+I+ I + L L L L N+I I L GLTNL+ LY
Sbjct: 287 TDISPLSGLTNLDALYLNNNQITDISPLSGLTNLDALYLNSNQITDISLLSGLTNLDALY 346
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
L N+I+ I L LT LN L L N++ I L LTNLT L L N +T I L
Sbjct: 347 LNSNQITDISPLLELTNLNYLILDNNQITDISPLSGLTNLTILILDNNQITDISPLSGLT 406
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
L L + N+I+ + ++ LT L +N NQ++D + ++ L N L+ ++L NP+
Sbjct: 407 NLGGLILNSNQITDVSPLSGLTNLTVLNLNSNQITDVSPLSGLTN---LRRLHLKDNPIP 463
Query: 296 QDPNYRRKIKLVCP 309
Q +CP
Sbjct: 464 QP---------ICP 468
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 123/225 (54%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
S + L+L N I I ++ LT+L L L DNQ+T I L L NL+ L L+ N+I
Sbjct: 205 SGLTSLTVLILYSNQITDISSLSGLTSLTVLILSDNQITDISPLSGLTNLDALYLNNNQI 264
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
+I L L NL+ LYL +N+I+ I + L L L L +N+I I L GLTNL+ LY
Sbjct: 265 TDISPLSGLTNLDALYLNNNQITDISPLSGLTNLDALYLNNNQITDISPLSGLTNLDALY 324
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
L N+I+ I L+ LT L+ L L N++ I L LTNL L L N +T I L
Sbjct: 325 LNSNQITDISLLSGLTNLDALYLNSNQITDISPLLELTNLNYLILDNNQITDISPLSGLT 384
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
L L + N+I+ I ++ LT L +N NQ++D + ++ L N
Sbjct: 385 NLTILILDNNQITDISPLSGLTNLGGLILNSNQITDVSPLSGLTN 429
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 114/201 (56%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I I + LT+L L L NQ+ + L L NL +L+L+ N+I +I L L +L L
Sbjct: 154 ITDISPLSGLTSLTGLILGGNQIKDVSPLSGLTNLTVLNLNNNQITDISPLSGLTSLTVL 213
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L SN+I+ I ++ L L VL L DN+I I L GLTNL+ LYL N+I+ I L+ L
Sbjct: 214 ILYSNQITDISSLSGLTSLTVLILSDNQITDISPLSGLTNLDALYLNNNQITDISPLSGL 273
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T L+ L L N++ I L LTNL LYL+ N +T I L L+ L + N+I+ I
Sbjct: 274 TNLDALYLNNNQITDISPLSGLTNLDALYLNNNQITDISPLSGLTNLDALYLNSNQITDI 333
Query: 251 QNIAHLTELQEFWINDNQVSD 271
++ LT L ++N NQ++D
Sbjct: 334 SLLSGLTNLDALYLNSNQITD 354
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 126/237 (53%), Gaps = 3/237 (1%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
S + L+L N IK + + LT L L L +NQ+T I L L +L +L L N+I
Sbjct: 161 SGLTSLTGLILGGNQIKDVSPLSGLTNLTVLNLNNNQITDISPLSGLTSLTVLILYSNQI 220
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
+I L L +L L L N+I+ I + L L L L +N+I I L GLTNL+ LY
Sbjct: 221 TDISSLSGLTSLTVLILSDNQITDISPLSGLTNLDALYLNNNQITDISPLSGLTNLDALY 280
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
L N+I+ I L+ LT L+ L L N++ I L LTNL LYL+ N +T I L
Sbjct: 281 LNNNQITDISPLSGLTNLDALYLNNNQITDISPLSGLTNLDALYLNSNQITDISLLSGLT 340
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
L+ L + N+I+ I + LT L +++NQ++D + ++ L N L + LD N
Sbjct: 341 NLDALYLNSNQITDISPLLELTNLNYLILDNNQITDISPLSGLTN---LTILILDNN 394
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 139/272 (51%), Gaps = 27/272 (9%)
Query: 43 EAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTL 102
EA T++ DE + L+L +N IK + + LT L L L++NQ+T I +L L
Sbjct: 62 EAGTSDCSQADEILSS--LNYLVLGYNQIKDVSPLSGLTNLTVLNLWNNQITDISSLSGL 119
Query: 103 INLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRI- 161
+L L L+ N+I +I L L NL L L +N+I+ I + L L L LG N+I+
Sbjct: 120 TSLTELYLNNNQITDISPLSGLTNLTVLNLNNNQITDISPLSGLTSLTGLILGGNQIKDV 179
Query: 162 ---------------------IENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
I L GLT+L L L N+I+ I +L+ LT L +L L
Sbjct: 180 SPLSGLTNLTVLNLNNNQITDISPLSGLTSLTVLILYSNQITDISSLSGLTSLTVLILSD 239
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQ 260
N++ I L LTNL LYL+ N +T I L L+ L + N+I+ I ++ LT L
Sbjct: 240 NQITDISPLSGLTNLDALYLNNNQITDISPLSGLTNLDALYLNNNQITDISPLSGLTNLD 299
Query: 261 EFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
++N+NQ++D + ++ L N L +YL+ N
Sbjct: 300 ALYLNNNQITDISPLSGLTN---LDALYLNSN 328
>gi|254411467|ref|ZP_05025244.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196181968|gb|EDX76955.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 577
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 119/220 (54%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L EL+L NQ+ + L L NL LDL +N+I+++
Sbjct: 246 LRRLYLSTNQIIDISPLSGLTNLTELDLKYNQIKDVSPLSGLTNLTELDLKYNQIKDVSP 305
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL LYL SN+I I + L L +L L DNKI+ I L GL NL L LG NK
Sbjct: 306 LSGLTNLTGLYLSSNQIKDISPLSGLTNLTLLYLSDNKIKDISPLSGLINLTGLDLGSNK 365
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I I L+ L L L L N+++ I L LTNLT L N +T + L L L
Sbjct: 366 IKDISPLSGLINLTGLDLSSNKIKDISPLSGLTNLTWFSLDNNQITEVS-LSGLTNLTEL 424
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ N+I+ + +++ LT L +N+NQ++D + ++ L N
Sbjct: 425 YLRNNQITDVSSLSELTNLTRLVLNNNQITDVSPLSGLTN 464
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 134/257 (52%), Gaps = 25/257 (9%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L L N IK I + LT L L L DN++ I L LINL LDL N+I++I
Sbjct: 312 LTGLYLSSNQIKDISPLSGLTNLTLLYLSDNKIKDISPLSGLINLTGLDLGSNKIKDISP 371
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL L L SNKI I + L L L +N+I + L GLTNL ELYL N+
Sbjct: 372 LSGLINLTGLDLSSNKIKDISPLSGLTNLTWFSLDNNQITEVS-LSGLTNLTELYLRNNQ 430
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN--------GLT--TIEN 230
I+ + +L+ LT L L L N++ + L LTNLT L LS N GLT T+ N
Sbjct: 431 ITDVSSLSELTNLTRLVLNNNQITDVSPLSGLTNLTVLNLSNNQITDVSLSGLTNLTVLN 490
Query: 231 LLSNE-----------KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
L +N+ L L++ N+I+ + ++ LT L +++NQ+ D + ++ L
Sbjct: 491 LSNNQITDVSPLSGLTNLTGLNLISNQITDVSILSGLTNLTVLILSNNQIKDVSPLSGLT 550
Query: 280 NNKQLQTIYLDRNPVAQ 296
N L+ +YL NP+ Q
Sbjct: 551 N---LRRLYLGDNPIPQ 564
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 126/231 (54%), Gaps = 5/231 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N IK + + LT L EL LY+NQ+ + L L NL L+L N+I+++ L
Sbjct: 97 LSLWGNQIKDVTPLSELTNLTELNLYNNQIKDVTPLSELTNLTELNLYNNQIKDVTPLSG 156
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL +L L SN+I+ I + L L L L +N+I + L GL NL EL L N+I+
Sbjct: 157 LINLTRLILFSNQITDITPLSGLTNLTELSLDNNQIIDVTPLSGLANLTELNLYNNQITE 216
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ +L+ LT L L L N++ + NL LTNL +LYLS N + I L L LD+
Sbjct: 217 V-SLSGLTNLTELYLSNNQITEV-NLSGLTNLRRLYLSTNQIIDISPLSGLTNLTELDLK 274
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
YN+I + ++ LT L E + NQ+ D + ++ L N L +YL N +
Sbjct: 275 YNQIKDVSPLSGLTNLTELDLKYNQIKDVSPLSGLTN---LTGLYLSSNQI 322
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 110/205 (53%), Gaps = 1/205 (0%)
Query: 76 NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSN 135
N+ LT L+ L L NQ+ I L L NL LDL +N+I+++ L L NL +L L N
Sbjct: 239 NLSGLTNLRRLYLSTNQIIDISPLSGLTNLTELDLKYNQIKDVSPLSGLTNLTELDLKYN 298
Query: 136 KISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNI 195
+I + + L L L L N+I+ I L GLTNL LYL NKI I L+ L L
Sbjct: 299 QIKDVSPLSGLTNLTGLYLSSNQIKDISPLSGLTNLTLLYLSDNKIKDISPLSGLINLTG 358
Query: 196 LSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAH 255
L L N+++ I L L NLT L LS N + I L L + N+I+ + ++
Sbjct: 359 LDLGSNKIKDISPLSGLINLTGLDLSSNKIKDISPLSGLTNLTWFSLDNNQITEVS-LSG 417
Query: 256 LTELQEFWINDNQVSDWNTVNVLEN 280
LT L E ++ +NQ++D ++++ L N
Sbjct: 418 LTNLTELYLRNNQITDVSSLSELTN 442
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 108/195 (55%), Gaps = 1/195 (0%)
Query: 77 IHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNK 136
+ LT L EL L +NQ+T + NL L NL L LS N+I +I L L NL +L L N+
Sbjct: 219 LSGLTNLTELYLSNNQITEV-NLSGLTNLRRLYLSTNQIIDISPLSGLTNLTELDLKYNQ 277
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
I + + L L L+L N+I+ + L GLTNL LYL N+I I L+ LT L +L
Sbjct: 278 IKDVSPLSGLTNLTELDLKYNQIKDVSPLSGLTNLTGLYLSSNQIKDISPLSGLTNLTLL 337
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
L N+++ I L L NLT L L N + I L L LD++ NKI I ++ L
Sbjct: 338 YLSDNKIKDISPLSGLINLTGLDLGSNKIKDISPLSGLINLTGLDLSSNKIKDISPLSGL 397
Query: 257 TELQEFWINDNQVSD 271
T L F +++NQ+++
Sbjct: 398 TNLTWFSLDNNQITE 412
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 121/245 (49%), Gaps = 20/245 (8%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
S + + RL+L N I I + LT L EL L +NQ+ + L L NL L+L N+I
Sbjct: 155 SGLINLTRLILFSNQITDITPLSGLTNLTELSLDNNQIIDVTPLSGLANLTELNLYNNQI 214
Query: 116 REIK--------------------GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELG 155
E+ L L NL +LYL +N+I I + L L L+L
Sbjct: 215 TEVSLSGLTNLTELYLSNNQITEVNLSGLTNLRRLYLSTNQIIDISPLSGLTNLTELDLK 274
Query: 156 DNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNL 215
N+I+ + L GLTNL EL L N+I + L+ LT L L L N+++ I L LTNL
Sbjct: 275 YNQIKDVSPLSGLTNLTELDLKYNQIKDVSPLSGLTNLTGLYLSSNQIKDISPLSGLTNL 334
Query: 216 TQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV 275
T LYLS+N + I L L LD+ NKI I ++ L L ++ N++ D + +
Sbjct: 335 TLLYLSDNKIKDISPLSGLINLTGLDLGSNKIKDISPLSGLINLTGLDLSSNKIKDISPL 394
Query: 276 NVLEN 280
+ L N
Sbjct: 395 SGLTN 399
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 114/209 (54%), Gaps = 2/209 (0%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L++ E +L NQ+T I L L NL L L N+I+++ L L NL +L L +N+I
Sbjct: 69 LSSRTEFDLKVNQITDISPLSGLTNLIGLSLWGNQIKDVTPLSELTNLTELNLYNNQIKD 128
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
+ + L L L L +N+I+ + L GL NL L L N+I+ I L+ LT L LSL
Sbjct: 129 VTPLSELTNLTELNLYNNQIKDVTPLSGLINLTRLILFSNQITDITPLSGLTNLTELSLD 188
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N++ + L L NLT+L L N +T + L L L ++ N+I+ + N++ LT L
Sbjct: 189 NNQIIDVTPLSGLANLTELNLYNNQITEVS-LSGLTNLTELYLSNNQITEV-NLSGLTNL 246
Query: 260 QEFWINDNQVSDWNTVNVLENNKQLQTIY 288
+ +++ NQ+ D + ++ L N +L Y
Sbjct: 247 RRLYLSTNQIIDISPLSGLTNLTELDLKY 275
>gi|207343682|gb|EDZ71073.1| YKL193Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323336852|gb|EGA78114.1| Sds22p [Saccharomyces cerevisiae Vin13]
Length = 218
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 101/149 (67%), Gaps = 5/149 (3%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLK--ELELYDNQLTVIE-NLDTLINLEILDLSFNRIRE 117
+++L LR NLI+ I + +L K +L+ YDN++ I N++ L L LDLSFN+I+
Sbjct: 68 LKQLCLRQNLIESISEVEVLPHDKIVDLDFYDNKIKHISSNVNKLTKLTSLDLSFNKIKH 127
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE--NLDGLTNLEELY 175
IK L++L +LE LY N ISKIEN+ LK LK LELG NK+ IE + +GL+NLEE++
Sbjct: 128 IKNLENLTDLENLYFVQNSISKIENLSTLKSLKNLELGGNKVHSIEPDSFEGLSNLEEIW 187
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLR 204
LGKN I R+ NL L L ILS+Q N+L+
Sbjct: 188 LGKNSIPRLINLHPLKNLKILSIQSNKLK 216
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 27/183 (14%)
Query: 104 NLEILDLSFNRIREIKGLD--HLANLEKLYLCSNKISKIENVDHLKKLKVLELG--DNKI 159
++E++DL +I+ ++ L+ NL++L L N I I V+ L K+++L DNKI
Sbjct: 43 DVEVIDLVHLKIKSLEDLNLYRFKNLKQLCLRQNLIESISEVEVLPHDKIVDLDFYDNKI 102
Query: 160 RIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLY 219
+ I + N+ LTKL L L N+++ I+NLE LT+L LY
Sbjct: 103 KHISS---------------------NVNKLTKLTSLDLSFNKIKHIKNLENLTDLENLY 141
Query: 220 LSENGLTTIENLLSNEKLETLDVAYNKISIIQ--NIAHLTELQEFWINDNQVSDWNTVNV 277
+N ++ IENL + + L+ L++ NK+ I+ + L+ L+E W+ N + ++
Sbjct: 142 FVQNSISKIENLSTLKSLKNLELGGNKVHSIEPDSFEGLSNLEEIWLGKNSIPRLINLHP 201
Query: 278 LEN 280
L+N
Sbjct: 202 LKN 204
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIE--NLDTLINLEILDLSFNRIREI 118
+E L N I KIEN+ L +LK LEL N++ IE + + L NLE + L N I +
Sbjct: 137 LENLYFVQNSISKIENLSTLKSLKNLELGGNKVHSIEPDSFEGLSNLEEIWLGKNSIPRL 196
Query: 119 KGLDHLANLEKLYLCSNKISK 139
L L NL+ L + SNK+ K
Sbjct: 197 INLHPLKNLKILSIQSNKLKK 217
>gi|434405929|ref|YP_007148814.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
gi|428260184|gb|AFZ26134.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
stagnale PCC 7417]
Length = 384
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 127/206 (61%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I I+ + LT L L+L +N+++ IE L L L L L N+I +IK L +L
Sbjct: 166 LSRNQINDIKPLSNLTNLTTLDLIENKISDIEPLSNLTKLTYLTLIENKISDIKPLSNLT 225
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL LYL +N+IS I+++ +L KL L L +NKI I+ L LTNL L L +N+IS I
Sbjct: 226 NLTALYLWNNEISDIKHLSNLTKLTYLLLSENKISDIKPLSNLTNLTSLGLDENQISDIK 285
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L++LT L L+L N++ I+ L LTNLT LYL N ++ I+ L + L +D+ YN
Sbjct: 286 PLSNLTNLTYLNLGLNQISDIKVLSNLTNLTSLYLDYNQISNIQPLFNLNNLTKIDLDYN 345
Query: 246 KISIIQNIAHLTELQEFWINDNQVSD 271
+IS I+ ++++T+L++ I +N + D
Sbjct: 346 QISDIKPLSNMTKLEKLEIQNNPIPD 371
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 134/230 (58%), Gaps = 3/230 (1%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
+ +N I I+ + LT L L L N+ + I+ L L NL L LS N+I +IK L +L
Sbjct: 122 IYYNQIIDIKPLSNLTKLIYLNLIKNEFSDIKPLSNLTNLIYLGLSRNQINDIKPLSNLT 181
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL L L NKIS IE + +L KL L L +NKI I+ L LTNL LYL N+IS I
Sbjct: 182 NLTTLDLIENKISDIEPLSNLTKLTYLTLIENKISDIKPLSNLTNLTALYLWNNEISDIK 241
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
+L++LTKL L L N++ I+ L LTNLT L L EN ++ I+ L + L L++ N
Sbjct: 242 HLSNLTKLTYLLLSENKISDIKPLSNLTNLTSLGLDENQISDIKPLSNLTNLTYLNLGLN 301
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+IS I+ +++LT L +++ NQ+S+ + L N L I LD N ++
Sbjct: 302 QISDIKVLSNLTNLTSLYLDYNQISN---IQPLFNLNNLTKIDLDYNQIS 348
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 135/257 (52%), Gaps = 41/257 (15%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEK---------- 129
LT LKEL+L N+++ I+ L L NL LDL FN+I +IK L +L NL
Sbjct: 70 LTQLKELKLGSNKISDIKPLSNLNNLIYLDLGFNQIIDIKPLSNLTNLTGINIYYNQIID 129
Query: 130 ------------LYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
L L N+ S I+ + +L L L L N+I I+ L LTNL L L
Sbjct: 130 IKPLSNLTKLIYLNLIKNEFSDIKPLSNLTNLIYLGLSRNQINDIKPLSNLTNLTTLDLI 189
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
+NKIS I+ L++LTKL L+L N++ I+ L LTNLT LYL N ++ I++L + KL
Sbjct: 190 ENKISDIEPLSNLTKLTYLTLIENKISDIKPLSNLTNLTALYLWNNEISDIKHLSNLTKL 249
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT-------------------VNVL 278
L ++ NKIS I+ +++LT L +++NQ+SD + VL
Sbjct: 250 TYLLLSENKISDIKPLSNLTNLTSLGLDENQISDIKPLSNLTNLTYLNLGLNQISDIKVL 309
Query: 279 ENNKQLQTIYLDRNPVA 295
N L ++YLD N ++
Sbjct: 310 SNLTNLTSLYLDYNQIS 326
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 2/180 (1%)
Query: 48 ESKAEDEE--SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINL 105
E+K D E S + L L N I I+ + LT L L L++N+++ I++L L L
Sbjct: 190 ENKISDIEPLSNLTKLTYLTLIENKISDIKPLSNLTNLTALYLWNNEISDIKHLSNLTKL 249
Query: 106 EILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENL 165
L LS N+I +IK L +L NL L L N+IS I+ + +L L L LG N+I I+ L
Sbjct: 250 TYLLLSENKISDIKPLSNLTNLTSLGLDENQISDIKPLSNLTNLTYLNLGLNQISDIKVL 309
Query: 166 DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGL 225
LTNL LYL N+IS I L +L L + L N++ I+ L +T L +L + N +
Sbjct: 310 SNLTNLTSLYLDYNQISNIQPLFNLNNLTKIDLDYNQISDIKPLSNMTKLEKLEIQNNPI 369
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ LLL N I I+ + LT L L L +NQ++ I+ L L NL L+L N+I +IK
Sbjct: 249 LTYLLLSENKISDIKPLSNLTNLTSLGLDENQISDIKPLSNLTNLTYLNLGLNQISDIKV 308
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L NL LYL N+IS I+ + +L L ++L N+I I+ L +T LE+L + N
Sbjct: 309 LSNLTNLTSLYLDYNQISNIQPLFNLNNLTKIDLDYNQISDIKPLSNMTKLEKLEIQNNP 368
Query: 181 IS 182
I
Sbjct: 369 IP 370
>gi|419971258|ref|ZP_14486716.1| leucine rich repeat protein, partial [Porphyromonas gingivalis W50]
gi|392608977|gb|EIW91803.1| leucine rich repeat protein, partial [Porphyromonas gingivalis W50]
Length = 277
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 119/183 (65%), Gaps = 6/183 (3%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
LK+L+L NQ++ +E L+ L +L L L N+IR+++GLD L +L KL L N+ISK
Sbjct: 98 FPALKKLDLSYNQISKLEGLERLTSLTKLRLRSNQIRKLEGLDSLTSLTKLSLSDNQISK 157
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
+E ++ L L L L DN+I +E L+ LT+L ELYL N+IS+++ L LT L L L+
Sbjct: 158 LEGLERLTSLAELYLLDNQISKLEGLERLTSLTELYLSGNQISKLEGLERLTSLTKLRLR 217
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAY---NKISIIQNIAHL 256
N++R +E L++LT+LT+L LS+N ++ +E L E+L +L Y N+IS ++ + L
Sbjct: 218 SNQIRKLEGLDSLTSLTKLSLSDNQISKLEGL---ERLTSLAELYLLDNQISKLEGLERL 274
Query: 257 TEL 259
T L
Sbjct: 275 TSL 277
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 114/178 (64%), Gaps = 3/178 (1%)
Query: 96 IENLDTLIN---LEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVL 152
IE++ LI+ L+ LDLS+N+I +++GL+ L +L KL L SN+I K+E +D L L L
Sbjct: 89 IESMTWLIDFPALKKLDLSYNQISKLEGLERLTSLTKLRLRSNQIRKLEGLDSLTSLTKL 148
Query: 153 ELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEAL 212
L DN+I +E L+ LT+L ELYL N+IS+++ L LT L L L N++ +E LE L
Sbjct: 149 SLSDNQISKLEGLERLTSLAELYLLDNQISKLEGLERLTSLTELYLSGNQISKLEGLERL 208
Query: 213 TNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
T+LT+L L N + +E L S L L ++ N+IS ++ + LT L E ++ DNQ+S
Sbjct: 209 TSLTKLRLRSNQIRKLEGLDSLTSLTKLSLSDNQISKLEGLERLTSLAELYLLDNQIS 266
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 173 ELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLL 232
EL L + +I + L L L L N++ +E LE LT+LT+L L N + +E L
Sbjct: 81 ELCLRECQIESMTWLIDFPALKKLDLSYNQISKLEGLERLTSLTKLRLRSNQIRKLEGLD 140
Query: 233 SNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
S L L ++ N+IS ++ + LT L E ++ DNQ+S + LE L +YL N
Sbjct: 141 SLTSLTKLSLSDNQISKLEGLERLTSLAELYLLDNQISK---LEGLERLTSLTELYLSGN 197
Query: 293 PVAQ 296
+++
Sbjct: 198 QISK 201
>gi|334117577|ref|ZP_08491668.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
gi|333460686|gb|EGK89294.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
Length = 348
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 127/225 (56%), Gaps = 3/225 (1%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L++L +L+L+DNQ+ I+ L +L NL L L N+I +IK L L NL +L L N I
Sbjct: 76 LSSLTKLDLFDNQIGDIKPLASLTNLTWLFLGSNQIGDIKPLASLTNLTRLSLSENPIGD 135
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I+ + L L L+L DN+I I+ L LTNL L+L N+I I LASLT L L L
Sbjct: 136 IKPLASLTNLTFLDLSDNQIGDIKPLASLTNLTILFLSDNQIGDIKPLASLTNLTFLFLS 195
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N++ I+ L +LTNLT L LS+N + I+ L S L +LD++ N+I I+ +A LT L
Sbjct: 196 DNKIGDIKPLASLTNLTFLDLSDNQIGDIKPLASLTNLSSLDLSDNRIGDIKPLASLTNL 255
Query: 260 QEFWINDNQVSDWNTVNVLENNKQL---QTIYLDRNPVAQDPNYR 301
+ DNQ+ D + L N +L + D P+A N R
Sbjct: 256 TRLNLLDNQIGDIKPLASLTNLTRLNLDGNVIGDIKPLASLTNLR 300
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 123/210 (58%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I+ + LT L L+L DNQ+ I+ L +L NL IL LS N+I +IK
Sbjct: 123 LTRLSLSENPIGDIKPLASLTNLTFLDLSDNQIGDIKPLASLTNLTILFLSDNQIGDIKP 182
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL L+L NKI I+ + L L L+L DN+I I+ L LTNL L L N+
Sbjct: 183 LASLTNLTFLFLSDNKIGDIKPLASLTNLTFLDLSDNQIGDIKPLASLTNLSSLDLSDNR 242
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I I LASLT L L+L N++ I+ L +LTNLT+L L N + I+ L S L +L
Sbjct: 243 IGDIKPLASLTNLTRLNLLDNQIGDIKPLASLTNLTRLNLDGNVIGDIKPLASLTNLRSL 302
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVS 270
D++ N I I+ +A LT+L ++ N+++
Sbjct: 303 DLSRNVIGDIKPLASLTKLTVLHLSGNEIA 332
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/253 (38%), Positives = 134/253 (52%), Gaps = 5/253 (1%)
Query: 43 EAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTL 102
EA T + A D K + +L L N I I+ + LT L L L NQ+ I+ L +L
Sbjct: 63 EAGTNDCDAADR--KLSSLTKLDLFDNQIGDIKPLASLTNLTWLFLGSNQIGDIKPLASL 120
Query: 103 INLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII 162
NL L LS N I +IK L L NL L L N+I I+ + L L +L L DN+I I
Sbjct: 121 TNLTRLSLSENPIGDIKPLASLTNLTFLDLSDNQIGDIKPLASLTNLTILFLSDNQIGDI 180
Query: 163 ENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSE 222
+ L LTNL L+L NKI I LASLT L L L N++ I+ L +LTNL+ L LS+
Sbjct: 181 KPLASLTNLTFLFLSDNKIGDIKPLASLTNLTFLDLSDNQIGDIKPLASLTNLSSLDLSD 240
Query: 223 NGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNK 282
N + I+ L S L L++ N+I I+ +A LT L ++ N + D + L N
Sbjct: 241 NRIGDIKPLASLTNLTRLNLLDNQIGDIKPLASLTNLTRLNLDGNVIGDIKPLASLTN-- 298
Query: 283 QLQTIYLDRNPVA 295
L+++ L RN +
Sbjct: 299 -LRSLDLSRNVIG 310
>gi|294872688|ref|XP_002766372.1| leucine-rich-repeat protein 4.2, putative [Perkinsus marinus ATCC
50983]
gi|239867177|gb|EEQ99089.1| leucine-rich-repeat protein 4.2, putative [Perkinsus marinus ATCC
50983]
Length = 187
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 86/115 (74%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IKK+E + L+ LELY N + ++ENL+ L+NL +LDLSFN+IR+I+G+ L NLEKL
Sbjct: 68 IKKLEGLEECKALEHLELYQNHIRIMENLNHLVNLRVLDLSFNKIRKIEGISSLVNLEKL 127
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
YL +NKI+ +E++ +L L +LELG NKIR IENL L LEEL++G+NKI ++
Sbjct: 128 YLANNKITTMEDLPYLPNLVLLELGSNKIRKIENLHNLPKLEELWIGRNKIESLE 182
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 84/134 (62%)
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELG 155
+ENL+ L+ L L N I++++GL+ LE L L N I +EN++HL L+VL+L
Sbjct: 49 LENLEKCRKLKSLKLIANDIKKLEGLEECKALEHLELYQNHIRIMENLNHLVNLRVLDLS 108
Query: 156 DNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNL 215
NKIR IE + L NLE+LYL NKI+ +++L L L +L L N++R IENL L L
Sbjct: 109 FNKIRKIEGISSLVNLEKLYLANNKITTMEDLPYLPNLVLLELGSNKIRKIENLHNLPKL 168
Query: 216 TQLYLSENGLTTIE 229
+L++ N + ++E
Sbjct: 169 EELWIGRNKIESLE 182
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 84/134 (62%)
Query: 136 KISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNI 195
++ K+EN++ +KLK L+L N I+ +E L+ LE L L +N I ++NL L L +
Sbjct: 45 RVGKLENLEKCRKLKSLKLIANDIKKLEGLEECKALEHLELYQNHIRIMENLNHLVNLRV 104
Query: 196 LSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAH 255
L L N++R IE + +L NL +LYL+ N +TT+E+L L L++ NKI I+N+ +
Sbjct: 105 LDLSFNKIRKIEGISSLVNLEKLYLANNKITTMEDLPYLPNLVLLELGSNKIRKIENLHN 164
Query: 256 LTELQEFWINDNQV 269
L +L+E WI N++
Sbjct: 165 LPKLEELWIGRNKI 178
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 81/137 (59%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
+ K+EN+ LK L+L N + +E L+ LE L+L N IR ++ L+HL NL L
Sbjct: 46 VGKLENLEKCRKLKSLKLIANDIKKLEGLEECKALEHLELYQNHIRIMENLNHLVNLRVL 105
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L NKI KIE + L L+ L L +NKI +E+L L NL L LG NKI +I+NL +L
Sbjct: 106 DLSFNKIRKIEGISSLVNLEKLYLANNKITTMEDLPYLPNLVLLELGSNKIRKIENLHNL 165
Query: 191 TKLNILSLQCNRLRTIE 207
KL L + N++ ++E
Sbjct: 166 PKLEELWIGRNKIESLE 182
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Query: 155 GDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTN 214
G R+ E+++ + EE+ + ++ +++NL KL L L N ++ +E LE
Sbjct: 20 GATIYRLGEDVELTEDQEEIDVSYLRVGKLENLEKCRKLKSLKLIANDIKKLEGLEECKA 79
Query: 215 LTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L L L +N + +ENL L LD+++NKI I+ I+ L L++ ++ +N+++
Sbjct: 80 LEHLELYQNHIRIMENLNHLVNLRVLDLSFNKIRKIEGISSLVNLEKLYLANNKITTMED 139
Query: 275 VNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWI 311
+ L N L + L N + + N KL WI
Sbjct: 140 LPYLPN---LVLLELGSNKIRKIENLHNLPKLEELWI 173
>gi|158429244|pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L NQ+T ++ L L LE LD+S N++ +I
Sbjct: 131 LNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKVSDISV 190
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 191 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 250
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 251 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 310
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + ++N+VSD +++ L N
Sbjct: 311 TLYFNNISDISPVSSLTKLQRLFFSNNKVSDVSSLANLTN 350
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 134/237 (56%), Gaps = 5/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 90 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 149
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L +L++L SN+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 150 LTSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 209
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 210 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 269
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 270 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 325
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 115/208 (55%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 173 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 232
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 233 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 292
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ S N ++ + +L + +
Sbjct: 293 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFSNNKVSDVSSLANLTNIN 352
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 353 WLSAGHNQISDLTPLANLTRITQLGLND 380
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 108/203 (53%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 73 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 132
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L L SN IS I + L L+ L N++ ++ L LT LE L + NK+S I LA
Sbjct: 133 RLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKVSDISVLA 192
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L L N++ I L LTNL +L L+ N L I L S L LD+A N+IS
Sbjct: 193 KLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQIS 252
Query: 249 IIQNIAHLTELQEFWINDNQVSD 271
+ ++ LT+L E + NQ+S+
Sbjct: 253 NLAPLSGLTKLTELKLGANQISN 275
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 192 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 251
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 252 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 311
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 312 LYFNNISDISPVSSLTKLQRLFFSNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 371
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 372 RITQLGLNDQAWT 384
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 40 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 96
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 97 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 156
Query: 263 WINDNQVSD 271
+ NQV+D
Sbjct: 157 SFSSNQVTD 165
>gi|158429242|pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 123/220 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L NQ+T ++ L L LE LD+S N++ +I
Sbjct: 131 LNRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKVSDISV 190
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 191 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 250
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 251 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 310
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 311 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 350
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 134/237 (56%), Gaps = 5/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 90 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 149
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L +L++L SN+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 150 LTSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 209
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 210 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 269
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 270 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 325
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 173 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 232
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 233 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 292
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 293 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 352
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 353 WLSAGHNQISDLTPLANLTRITQLGLND 380
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 108/203 (53%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 73 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 132
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L L SN IS I + L L+ L N++ ++ L LT LE L + NK+S I LA
Sbjct: 133 RLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKVSDISVLA 192
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L L N++ I L LTNL +L L+ N L I L S L LD+A N+IS
Sbjct: 193 KLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQIS 252
Query: 249 IIQNIAHLTELQEFWINDNQVSD 271
+ ++ LT+L E + NQ+S+
Sbjct: 253 NLAPLSGLTKLTELKLGANQISN 275
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 192 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 251
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 252 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 311
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 312 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 371
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 372 RITQLGLNDQAWT 384
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 40 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 96
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 97 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 156
Query: 263 WINDNQVSD 271
+ NQV+D
Sbjct: 157 SFSSNQVTD 165
>gi|294358401|gb|ADE73853.1| InlA [Listeria monocytogenes]
Length = 800
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 120/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L GLTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLAGLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLAGLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 125/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLAGLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLAGLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|443695667|gb|ELT96533.1| hypothetical protein CAPTEDRAFT_183497 [Capitella teleta]
Length = 595
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 106/181 (58%)
Query: 135 NKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLN 194
N IS+I+N+ +K+L L+L DN I I LD L +L L LGKN+I +I NL SLTKL+
Sbjct: 43 NLISRIDNLSCMKRLIFLDLYDNHIDQISGLDALKSLRVLMLGKNRIKKILNLNSLTKLD 102
Query: 195 ILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIA 254
+L L N++ IENL LT L L L+ N + + L E L L++ N+IS + ++
Sbjct: 103 VLDLHGNQISCIENLNHLTELRVLNLAGNCIRRVNKLSGLEALTELNLRRNQISTVTDVE 162
Query: 255 HLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQI 314
L LQ +++ N++S ++ + L ++ L I LD NP A DPNY++ + + Q
Sbjct: 163 GLPSLQRLFLSFNEISSFDDIMCLGDSSMLSEISLDGNPFASDPNYKQTVLSFMHQLKQF 222
Query: 315 D 315
D
Sbjct: 223 D 223
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 82/141 (58%), Gaps = 3/141 (2%)
Query: 60 CIERLL---LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIR 116
C++RL+ L N I +I + L +L+ L L N++ I NL++L L++LDL N+I
Sbjct: 53 CMKRLIFLDLYDNHIDQISGLDALKSLRVLMLGKNRIKKILNLNSLTKLDVLDLHGNQIS 112
Query: 117 EIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYL 176
I+ L+HL L L L N I ++ + L+ L L L N+I + +++GL +L+ L+L
Sbjct: 113 CIENLNHLTELRVLNLAGNCIRRVNKLSGLEALTELNLRRNQISTVTDVEGLPSLQRLFL 172
Query: 177 GKNKISRIDNLASLTKLNILS 197
N+IS D++ L ++LS
Sbjct: 173 SFNEISSFDDIMCLGDSSMLS 193
>gi|158429246|pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 123/220 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L NQ+T ++ L L LE LD+S N++ +I
Sbjct: 131 LNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVSDISV 190
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 191 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 250
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 251 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 310
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 311 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 350
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 134/237 (56%), Gaps = 5/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 90 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 149
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L +L++L SN+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 150 LTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 209
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 210 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 269
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 270 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 325
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 173 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 232
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 233 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 292
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 293 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 352
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 353 WLSAGHNQISDLTPLANLTRITQLGLND 380
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 108/203 (53%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 73 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 132
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L L SN IS I + L L+ L N++ ++ L LT LE L + NK+S I LA
Sbjct: 133 RLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSNKVSDISVLA 192
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L L N++ I L LTNL +L L+ N L I L S L LD+A N+IS
Sbjct: 193 KLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQIS 252
Query: 249 IIQNIAHLTELQEFWINDNQVSD 271
+ ++ LT+L E + NQ+S+
Sbjct: 253 NLAPLSGLTKLTELKLGANQISN 275
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 192 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 251
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 252 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 311
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 312 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 371
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 372 RITQLGLNDQAWT 384
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 40 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 96
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 97 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 156
Query: 263 WINDNQVSD 271
+ NQV+D
Sbjct: 157 NFSSNQVTD 165
>gi|428317856|ref|YP_007115738.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428241536|gb|AFZ07322.1| Tetratricopeptide TPR_1 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 1221
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 139/263 (52%), Gaps = 8/263 (3%)
Query: 38 PDEESEAETTESKAEDEESKEVC-----IERLLLRWNLIKKIENIHMLTTLKELELYDNQ 92
P+ E SKA+ +E + L L N I I+ + T L++L L NQ
Sbjct: 60 PEARHTVEVLLSKAKTQECDRAQKTLTNLTELSLIRNQIVDIKPLSKFTNLRKLNLSINQ 119
Query: 93 LTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVL 152
+T ++ L L NL L L+ N+I ++K L L NL LYL N+I I+ + L+ L
Sbjct: 120 ITDVQPLSGLTNLRYLTLTSNQISDVKPLSGLTNLTLLYLADNQIVDIKPLSKFTNLRRL 179
Query: 153 ELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEAL 212
L N+I ++ L GLTNL L L N+IS + L+ LT L L L+ N++ ++ L L
Sbjct: 180 NLSVNQITDVQPLSGLTNLRSLVLNFNQISDVKPLSGLTNLTELFLEANQIVDVKPLAGL 239
Query: 213 TNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDW 272
TNLT L L+ N + + L + +L L ++ NKI+ ++ ++ LT L ++ NQ++D
Sbjct: 240 TNLTGLSLASNQIVDVTPLSTMTELNFLYLSGNKIADVKPLSGLTNLIVLFLASNQIADV 299
Query: 273 NTVNVLENNKQLQTIYLDRNPVA 295
++ L N L T+ L RN +A
Sbjct: 300 KPLSGLTN---LPTLDLSRNQIA 319
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 131/240 (54%), Gaps = 3/240 (1%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK + +L L N I ++ + LT L+ L L NQ++ ++ L L NL +L L+ N+I
Sbjct: 105 SKFTNLRKLNLSINQITDVQPLSGLTNLRYLTLTSNQISDVKPLSGLTNLTLLYLADNQI 164
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
+IK L NL +L L N+I+ ++ + L L+ L L N+I ++ L GLTNL EL+
Sbjct: 165 VDIKPLSKFTNLRRLNLSVNQITDVQPLSGLTNLRSLVLNFNQISDVKPLSGLTNLTELF 224
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
L N+I + LA LT L LSL N++ + L +T L LYLS N + ++ L
Sbjct: 225 LEANQIVDVKPLAGLTNLTGLSLASNQIVDVTPLSTMTELNFLYLSGNKIADVKPLSGLT 284
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
L L +A N+I+ ++ ++ LT L ++ NQ++D + L N L + L RN +A
Sbjct: 285 NLIVLFLASNQIADVKPLSGLTNLPTLDLSRNQIADATPLAGLTN---LTNLDLSRNQIA 341
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 116/208 (55%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I ++ + LT L L L DNQ+ I+ L NL L+LS N+I +++ L
Sbjct: 135 LTLTSNQISDVKPLSGLTNLTLLYLADNQIVDIKPLSKFTNLRRLNLSVNQITDVQPLSG 194
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL L L N+IS ++ + L L L L N+I ++ L GLTNL L L N+I
Sbjct: 195 LTNLRSLVLNFNQISDVKPLSGLTNLTELFLEANQIVDVKPLAGLTNLTGLSLASNQIVD 254
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ L+++T+LN L L N++ ++ L LTNL L+L+ N + ++ L L TLD++
Sbjct: 255 VTPLSTMTELNFLYLSGNKIADVKPLSGLTNLIVLFLASNQIADVKPLSGLTNLPTLDLS 314
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSD 271
N+I+ +A LT L ++ NQ++D
Sbjct: 315 RNQIADATPLAGLTNLTNLDLSRNQIAD 342
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 117/221 (52%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I I+ + T L+ L L NQ+T ++ L L NL L L+FN+I ++K L
Sbjct: 157 LYLADNQIVDIKPLSKFTNLRRLNLSVNQITDVQPLSGLTNLRSLVLNFNQISDVKPLSG 216
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL +L+L +N+I ++ + L L L L N+I + L +T L LYL NKI+
Sbjct: 217 LTNLTELFLEANQIVDVKPLAGLTNLTGLSLASNQIVDVTPLSTMTELNFLYLSGNKIAD 276
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ L+ LT L +L L N++ ++ L LTNL L LS N + L L LD++
Sbjct: 277 VKPLSGLTNLIVLFLASNQIADVKPLSGLTNLPTLDLSRNQIADATPLAGLTNLTNLDLS 336
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQL 284
N+I+ +A L L ++ NQ+ D +++ NKQL
Sbjct: 337 RNQIADATPLAGLVYLTTLDLSRNQIPDGEAERLIQKNKQL 377
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 102/192 (53%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK + RL L N I ++ + LT L+ L L NQ++ ++ L L NL L L N+I
Sbjct: 171 SKFTNLRRLNLSVNQITDVQPLSGLTNLRSLVLNFNQISDVKPLSGLTNLTELFLEANQI 230
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++K L L NL L L SN+I + + + +L L L NKI ++ L GLTNL L+
Sbjct: 231 VDVKPLAGLTNLTGLSLASNQIVDVTPLSTMTELNFLYLSGNKIADVKPLSGLTNLIVLF 290
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
L N+I+ + L+ LT L L L N++ L LTNLT L LS N + L
Sbjct: 291 LASNQIADVKPLSGLTNLPTLDLSRNQIADATPLAGLTNLTNLDLSRNQIADATPLAGLV 350
Query: 236 KLETLDVAYNKI 247
L TLD++ N+I
Sbjct: 351 YLTTLDLSRNQI 362
>gi|149242641|pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
gi|149242643|pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 131 LNRLELSSNTISDISALSGLTSLQQLN-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 189
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 190 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 249
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 250 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 309
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + ++N+VSD +++ L N
Sbjct: 310 TLYFNNISDISPVSSLTKLQRLFFSNNKVSDVSSLANLTN 349
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 115/208 (55%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 172 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 231
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 232 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 291
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ S N ++ + +L + +
Sbjct: 292 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFSNNKVSDVSSLANLTNIN 351
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 352 WLSAGHNQISDLTPLANLTRITQLGLND 379
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 73 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 132
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 133 RLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 192
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 193 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 252
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 253 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 311
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 312 YFNNISDISPVSS 324
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 53 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 112
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 113 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFG-NQVTDLKPLANL 171
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 172 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 217
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 191 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 250
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 251 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 310
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 311 LYFNNISDISPVSSLTKLQRLFFSNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 370
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 371 RITQLGLNDQAWT 383
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 40 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 96
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 97 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 156
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 157 NFG-NQVTD 164
>gi|194239378|emb|CAQ76829.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +NKIS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNKISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 130/228 (57%), Gaps = 2/228 (0%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y ++
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNK 350
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 115/208 (55%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N++ I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNKISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 88/166 (53%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L NKI I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNKISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|298360234|gb|ADI77696.1| internalin A [Listeria monocytogenes]
gi|298360500|gb|ADI77829.1| internalin A [Listeria monocytogenes]
gi|298360708|gb|ADI77933.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 120/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I +L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISSLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNDISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 134/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T ++ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L +L++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTSLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I ++A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISSLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNDISDISPVSS 359
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 115/208 (55%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I +L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISSLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNDISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 96/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I ++ L L LEL +N+ I I NL
Sbjct: 286 SNLAPLSGLTKLTELKLGANQISNISSLAGLTALTNLELNENQLEDISPISNLKNLTYLT 345
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 346 LYFNDISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 405
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 406 RITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|158429248|pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 135 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 193
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 194 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 253
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 254 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 313
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 314 TLYFNNISDISPVSSLTKLQRLFFANNKVSDVSSLANLTN 353
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 115/208 (55%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 176 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 235
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 236 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 295
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ + N ++ + +L + +
Sbjct: 296 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSDVSSLANLTNIN 355
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 356 WLSAGHNQISDLTPLANLTRITQLGLND 383
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 77 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 136
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 137 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 196
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 197 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 256
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 257 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 315
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 316 YFNNISDISPVSS 328
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 57 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 116
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 117 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 175
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 176 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 221
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 195 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 254
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 255 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 314
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 315 LYFNNISDISPVSSLTKLQRLFFANNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 374
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 375 RITQLGLNDQAWT 387
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 44 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 100
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 101 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 160
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 161 SFG-NQVTD 168
>gi|38154342|gb|AAR12158.1| internalin A [Listeria monocytogenes]
Length = 728
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 110 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 168
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 169 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 228
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 229 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 288
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 289 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 319
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 210
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 211 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 270
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 271 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 330
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 331 WLSAGHNQISDLTPLANLTRITQLGLND 358
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 52 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 111
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 112 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 171
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 172 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 231
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 232 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 290
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 291 YFNNISDISPVSS 303
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 32 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 91
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 92 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 151
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 152 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 211
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 212 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 253
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 32 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 91
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 92 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 150
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 196
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 197 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 256
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 257 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 316
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 317 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 362
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 18 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 74
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 75 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 134
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 135 LSFG-NQVTD 143
>gi|22347554|gb|AAM95922.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 110 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 168
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 169 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 228
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 229 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 288
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 289 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 319
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 210
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 211 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 270
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 271 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 330
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 331 WLSAGHNQISDLTPLANLTRITQLGLND 358
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 52 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 111
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 112 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 171
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 172 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 231
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 232 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 290
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 291 YFNNISDISPVSS 303
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 32 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 91
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 92 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 151
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 152 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 211
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 212 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 253
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 32 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 91
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 92 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 150
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 196
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 197 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 256
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 257 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 316
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 317 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 362
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 18 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 74
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 75 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 134
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 135 LSFG-NQVTD 143
>gi|428320680|ref|YP_007118562.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
gi|428244360|gb|AFZ10146.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
Length = 360
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 119/217 (54%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L+L N I I + LT LK L + NQ+ I L +LINL +L L N+I +I L
Sbjct: 96 LILGSNQISDIAPLQSLTNLKTLVIDVNQILDISPLSSLINLTVLVLDTNQISDISPLAG 155
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L +L L L NKIS I V +L L L L +N+I I L+ LT L+ LYL NKIS
Sbjct: 156 LTDLTALVLFDNKISDITPVKNLTNLNALILYNNQISDIAPLENLTELQTLYLYNNKISD 215
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I LASL L L L N + + LEALTNL +L L +N ++ I L S L L++
Sbjct: 216 ITPLASLKNLTTLFLFGNEISDLTPLEALTNLNKLVLFQNKISDISPLTSLTNLIELNLG 275
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
N+IS I + LT L E ++ +N +SD + + L N
Sbjct: 276 NNQISDISPLKSLTNLTELYLFNNPISDSSALQALNN 312
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/206 (39%), Positives = 116/206 (56%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L+L N I I + LT L L L+DN+++ I + L NL L L N+I +I L++
Sbjct: 140 LVLDTNQISDISPLAGLTDLTALVLFDNKISDITPVKNLTNLNALILYNNQISDIAPLEN 199
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L L+ LYL +NKIS I + LK L L L N+I + L+ LTNL +L L +NKIS
Sbjct: 200 LTELQTLYLYNNKISDITPLASLKNLTTLFLFGNEISDLTPLEALTNLNKLVLFQNKISD 259
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L SLT L L+L N++ I L++LTNLT+LYL N ++ L + L LD+
Sbjct: 260 ISPLTSLTNLIELNLGNNQISDISPLKSLTNLTELYLFNNPISDSSALQALNNLFLLDLY 319
Query: 244 YNKISIIQNIAHLTELQEFWINDNQV 269
N+IS I ++ L +L + N +
Sbjct: 320 NNQISDISSLESLHKLTTLDLRGNPI 345
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 118/225 (52%), Gaps = 3/225 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I I + T L L L NQ++ I L +L NL+ L + N+I +I L L NL L
Sbjct: 81 IIDISPLSSFTQLTNLILGSNQISDIAPLQSLTNLKTLVIDVNQILDISPLSSLINLTVL 140
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L +N+IS I + L L L L DNKI I + LTNL L L N+IS I L +L
Sbjct: 141 VLDTNQISDISPLAGLTDLTALVLFDNKISDITPVKNLTNLNALILYNNQISDIAPLENL 200
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T+L L L N++ I L +L NLT L+L N ++ + L + L L + NKIS I
Sbjct: 201 TELQTLYLYNNKISDITPLASLKNLTTLFLFGNEISDLTPLEALTNLNKLVLFQNKISDI 260
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+ LT L E + +NQ+SD + + L N L +YL NP++
Sbjct: 261 SPLTSLTNLIELNLGNNQISDISPLKSLTN---LTELYLFNNPIS 302
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 85/167 (50%)
Query: 114 RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEE 173
+I +I L L L L SN+IS I + L LK L + N+I I L L NL
Sbjct: 80 QIIDISPLSSFTQLTNLILGSNQISDIAPLQSLTNLKTLVIDVNQILDISPLSSLINLTV 139
Query: 174 LYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLS 233
L L N+IS I LA LT L L L N++ I ++ LTNL L L N ++ I L +
Sbjct: 140 LVLDTNQISDISPLAGLTDLTALVLFDNKISDITPVKNLTNLNALILYNNQISDIAPLEN 199
Query: 234 NEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+L+TL + NKIS I +A L L ++ N++SD + L N
Sbjct: 200 LTELQTLYLYNNKISDITPLASLKNLTTLFLFGNEISDLTPLEALTN 246
>gi|27574254|pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
gi|27574256|pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
gi|27574257|pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
gi|27574258|pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 136 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 194
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 195 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 254
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 255 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 314
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 315 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 354
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 78 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 137
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 138 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 197
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 198 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 257
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 258 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 316
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 317 YFNNISDISPVSS 329
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 177 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 236
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 237 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 296
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 297 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 356
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 357 WLSAGHNQISDLTPLANLTRITQLGLND 384
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 58 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 117
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 118 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 176
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 177 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 222
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 196 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 255
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 256 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 315
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 316 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 375
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 376 RITQLGLNDQAWT 388
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 45 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 101
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 102 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 161
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 162 SFG-NQVTD 169
>gi|223698664|gb|ACN19016.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|219821390|gb|ACL37838.1| internalin A [Listeria monocytogenes]
Length = 744
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 50 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 109
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 110 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 169
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 170 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 229
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 230 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 288
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 289 YFNNISDISPVSS 301
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 195 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 254
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 255 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 314
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 315 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 360
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|223698607|gb|ACN18978.1| internalin A [Listeria monocytogenes]
gi|223698703|gb|ACN19042.1| internalin A [Listeria monocytogenes]
gi|223698760|gb|ACN19080.1| internalin A [Listeria monocytogenes]
gi|223698907|gb|ACN19178.1| internalin A [Listeria monocytogenes]
gi|223698910|gb|ACN19180.1| internalin A [Listeria monocytogenes]
gi|223698916|gb|ACN19184.1| internalin A [Listeria monocytogenes]
gi|223698919|gb|ACN19186.1| internalin A [Listeria monocytogenes]
gi|223698964|gb|ACN19216.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|22347566|gb|AAM95928.1| internalin A precursor [Listeria monocytogenes]
Length = 746
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 110 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 168
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 169 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 228
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 229 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 288
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 289 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 319
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 210
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 211 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 270
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 271 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 330
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 331 WLSAGHNQISDLTPLANLTRITQLGLND 358
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 52 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 111
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 112 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 171
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 172 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 231
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 232 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 290
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 291 YFNNISDISPVSS 303
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 32 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 91
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 151
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 152 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 211
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 212 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 253
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 32 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 91
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 150
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 196
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 197 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 256
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 257 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 316
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 317 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 362
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 18 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 74
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 75 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 134
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 135 LSFG-NQVTD 143
>gi|22347556|gb|AAM95923.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 110 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 168
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 169 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 228
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 229 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 288
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 289 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 319
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 210
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 211 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 270
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 271 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 330
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 331 WLSAGHNQISDLTPLANLTRITQLGLND 358
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 52 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 111
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 112 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 171
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 172 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 231
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 232 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 290
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 291 YFNNISDISPVSS 303
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 32 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 91
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 92 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 151
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 152 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 211
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 212 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 253
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 32 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 91
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 92 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 150
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 196
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 197 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 256
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 257 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 316
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 317 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 362
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 18 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 74
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 75 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 134
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 135 LSFG-NQVTD 143
>gi|223698886|gb|ACN19164.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIGDITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIGDITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIGDITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|223698976|gb|ACN19224.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|397781344|ref|YP_006545817.1| Internalin-A [Methanoculleus bourgensis MS2]
gi|396939846|emb|CCJ37101.1| Internalin-A [Methanoculleus bourgensis MS2]
Length = 2759
Score = 112 bits (279), Expect = 3e-22, Method: Composition-based stats.
Identities = 75/241 (31%), Positives = 128/241 (53%), Gaps = 2/241 (0%)
Query: 33 MSLDNPDEES--EAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYD 90
++ ++P+ E+ E ++ K + + RL I+ + + L+ L + +
Sbjct: 1480 VTFNDPNLEAAVRQELSKPKGDITADDMATLTRLSAAGRGIRDLSGLEYAVNLQTLYISN 1539
Query: 91 NQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLK 150
NQ++ + L L NL+ L L N++ ++ L L NL++L+L N+I + + L L+
Sbjct: 1540 NQISDLSPLAGLTNLQTLWLQDNQVSDLSPLAGLTNLQRLWLNQNQIRDVSPLAGLTNLR 1599
Query: 151 VLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLE 210
L L N+I + L GLTNL + L +N+IS + LA LT L + L N++ + L
Sbjct: 1600 ELLLAVNQISDLSPLAGLTNLGYVQLYRNQISDLSPLAGLTNLGYVQLYRNQISDLSPLA 1659
Query: 211 ALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
LTNL L +S N ++ + L S L LD++YN+IS I +A LT L +++NQ+S
Sbjct: 1660 GLTNLYFLDISYNQISDLSPLASLTNLYFLDISYNQISDISPLAGLTRLSRLSLDNNQIS 1719
Query: 271 D 271
D
Sbjct: 1720 D 1720
Score = 108 bits (270), Expect = 3e-21, Method: Composition-based stats.
Identities = 81/239 (33%), Positives = 126/239 (52%), Gaps = 4/239 (1%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V ++ L + N I + + LT L+ L L DNQ++ + L L NL+ L L+ N+IR++
Sbjct: 1530 VNLQTLYISNNQISDLSPLAGLTNLQTLWLQDNQVSDLSPLAGLTNLQRLWLNQNQIRDV 1589
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL +L L N+IS + + L L ++L N+I + L GLTNL + L +
Sbjct: 1590 SPLAGLTNLRELLLAVNQISDLSPLAGLTNLGYVQLYRNQISDLSPLAGLTNLGYVQLYR 1649
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N+IS + LA LT L L + N++ + L +LTNL L +S N ++ I L +L
Sbjct: 1650 NQISDLSPLAGLTNLYFLDISYNQISDLSPLASLTNLYFLDISYNQISDISPLAGLTRLS 1709
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV----NVLENNKQLQTIYLDRNP 293
L + N+IS I +A L L +N NQ+ D + + + ++ LQ YLD P
Sbjct: 1710 RLSLDNNQISDISPLAGLINLYVLNLNYNQIRDISPLVANSGLAGDDVYLQYNYLDLTP 1768
Score = 99.0 bits (245), Expect = 3e-18, Method: Composition-based stats.
Identities = 70/218 (32%), Positives = 110/218 (50%), Gaps = 25/218 (11%)
Query: 100 DTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKI 159
D + L L + IR++ GL++ NL+ LY+ +N+IS + + L L+ L L DN++
Sbjct: 1505 DDMATLTRLSAAGRGIRDLSGLEYAVNLQTLYISNNQISDLSPLAGLTNLQTLWLQDNQV 1564
Query: 160 RIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNL--TQ 217
+ L GLTNL+ L+L +N+I + LA LT L L L N++ + L LTNL Q
Sbjct: 1565 SDLSPLAGLTNLQRLWLNQNQIRDVSPLAGLTNLRELLLAVNQISDLSPLAGLTNLGYVQ 1624
Query: 218 LY--------------------LSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLT 257
LY L N ++ + L L LD++YN+IS + +A LT
Sbjct: 1625 LYRNQISDLSPLAGLTNLGYVQLYRNQISDLSPLAGLTNLYFLDISYNQISDLSPLASLT 1684
Query: 258 ELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
L I+ NQ+SD ++ L +L + LD N ++
Sbjct: 1685 NLYFLDISYNQISD---ISPLAGLTRLSRLSLDNNQIS 1719
Score = 87.0 bits (214), Expect = 9e-15, Method: Composition-based stats.
Identities = 60/165 (36%), Positives = 89/165 (53%), Gaps = 4/165 (2%)
Query: 100 DTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNK-ISKIENVDHLKKLKVLELGDNK 158
D + L + IR++ GL++ NL+ LYL N+ IS + + L L+ L+L +N+
Sbjct: 713 DDMATFITLGADWRGIRDLSGLEYAVNLQHLYLQQNRQISDLGPLAGLTDLQTLDLWNNQ 772
Query: 159 IRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
I + L GLTNL L LG N+IS I LA LT L L L N++R I L LTNL +L
Sbjct: 773 ISDLSPLAGLTNLSVLLLGSNQISDIGPLAGLTDLQRLHLYDNQIRDIGPLAGLTNLWEL 832
Query: 219 YLSENGLTTIENLLSNEKLETLD---VAYNKISIIQNIAHLTELQ 260
L N + I L++N L + D + YN + + A + ++Q
Sbjct: 833 RLYNNQIRDIGPLVANSGLGSGDEVYLQYNYLDLTPGSADMNDIQ 877
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 49/127 (38%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
Query: 68 WNLIKKIENIHMLTTLKELELYDN-QLTVIENLDTLINLEILDLSFNRIREIKGLDHLAN 126
W I+ + + L+ L L N Q++ + L L +L+ LDL N+I ++ L L N
Sbjct: 725 WRGIRDLSGLEYAVNLQHLYLQQNRQISDLGPLAGLTDLQTLDLWNNQISDLSPLAGLTN 784
Query: 127 LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDN 186
L L L SN+IS I + L L+ L L DN+IR I L GLTNL EL L N+I I
Sbjct: 785 LSVLLLGSNQISDIGPLAGLTDLQRLHLYDNQIRDIGPLAGLTNLWELRLYNNQIRDIGP 844
Query: 187 LASLTKL 193
L + + L
Sbjct: 845 LVANSGL 851
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 52/150 (34%), Positives = 73/150 (48%), Gaps = 12/150 (8%)
Query: 159 IRIIENLDGLTNLEELYLGKNK-ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQ 217
IR + L+ NL+ LYL +N+ IS + LA LT L L L N++ + L LTNL+
Sbjct: 728 IRDLSGLEYAVNLQHLYLQQNRQISDLGPLAGLTDLQTLDLWNNQISDLSPLAGLTNLSV 787
Query: 218 LYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV 277
L L N ++ I L L+ L + N+I I +A LT L E + +NQ+ D +
Sbjct: 788 LLLGSNQISDIGPLAGLTDLQRLHLYDNQIRDIGPLAGLTNLWELRLYNNQIRD---IGP 844
Query: 278 LENNK--------QLQTIYLDRNPVAQDPN 299
L N LQ YLD P + D N
Sbjct: 845 LVANSGLGSGDEVYLQYNYLDLTPGSADMN 874
Score = 38.9 bits (89), Expect = 3.5, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL-- 121
LLL N I I + LT L+ L LYDNQ+ I L L NL L L N+IR+I L
Sbjct: 788 LLLGSNQISDIGPLAGLTDLQRLHLYDNQIRDIGPLAGLTNLWELRLYNNQIRDIGPLVA 847
Query: 122 -DHLANLEKLYLCSN 135
L + +++YL N
Sbjct: 848 NSGLGSGDEVYLQYN 862
>gi|223698655|gb|ACN19010.1| internalin A [Listeria monocytogenes]
gi|223698913|gb|ACN19182.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|223698643|gb|ACN19002.1| internalin A [Listeria monocytogenes]
gi|223698646|gb|ACN19004.1| internalin A [Listeria monocytogenes]
gi|223698670|gb|ACN19020.1| internalin A [Listeria monocytogenes]
gi|223698673|gb|ACN19022.1| internalin A [Listeria monocytogenes]
gi|223698718|gb|ACN19052.1| internalin A [Listeria monocytogenes]
gi|223698754|gb|ACN19076.1| internalin A [Listeria monocytogenes]
gi|223698757|gb|ACN19078.1| internalin A [Listeria monocytogenes]
gi|223698796|gb|ACN19104.1| internalin A [Listeria monocytogenes]
gi|223698826|gb|ACN19124.1| internalin A [Listeria monocytogenes]
gi|223698829|gb|ACN19126.1| internalin A [Listeria monocytogenes]
gi|223698832|gb|ACN19128.1| internalin A [Listeria monocytogenes]
gi|223698862|gb|ACN19148.1| internalin A [Listeria monocytogenes]
gi|223698895|gb|ACN19170.1| internalin A [Listeria monocytogenes]
gi|223698925|gb|ACN19190.1| internalin A [Listeria monocytogenes]
gi|223698928|gb|ACN19192.1| internalin A [Listeria monocytogenes]
gi|223698931|gb|ACN19194.1| internalin A [Listeria monocytogenes]
gi|223698934|gb|ACN19196.1| internalin A [Listeria monocytogenes]
gi|223698937|gb|ACN19198.1| internalin A [Listeria monocytogenes]
gi|223698940|gb|ACN19200.1| internalin A [Listeria monocytogenes]
gi|223698943|gb|ACN19202.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|254828935|ref|ZP_05233622.1| internalin A [Listeria monocytogenes FSL N3-165]
gi|130774797|gb|ABO32413.1| InlA [Listeria monocytogenes]
gi|130774811|gb|ABO32418.1| InlA [Listeria monocytogenes]
gi|194239388|emb|CAQ76834.1| internalin A [Listeria monocytogenes]
gi|258601346|gb|EEW14671.1| internalin A [Listeria monocytogenes FSL N3-165]
gi|298360424|gb|ADI77791.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|223698835|gb|ACN19130.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|219821375|gb|ACL37828.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 50 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 109
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 110 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 169
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 170 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 229
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 230 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 288
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 289 YFNNISDISPVSS 301
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 195 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 254
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 255 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 314
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 315 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 360
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|223006802|gb|ACM69358.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|219821366|gb|ACL37822.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 50 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 109
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 110 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 169
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 170 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 229
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 230 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 288
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 289 YFNNISDISPVSS 301
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|112959500|gb|ABI27277.1| internalin A [Listeria monocytogenes]
gi|112959502|gb|ABI27278.1| internalin A [Listeria monocytogenes]
gi|112959510|gb|ABI27282.1| internalin A [Listeria monocytogenes]
gi|112959512|gb|ABI27283.1| internalin A [Listeria monocytogenes]
gi|112959524|gb|ABI27289.1| internalin A [Listeria monocytogenes]
gi|112959530|gb|ABI27292.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 103 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 161
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 162 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 221
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 222 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 281
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 282 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 312
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 203
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 204 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 263
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 264 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 323
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 324 WLSAGHNQISDLTPLANLTRITQLGLND 351
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 45 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 104
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 105 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 164
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 165 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 224
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 225 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 283
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 284 YFNNISDISPVSS 296
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 84
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 144
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 145 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 204
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 205 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 246
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 84
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 143
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 189
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 11 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 67
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 68 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 127
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 128 LSFG-NQVTD 136
>gi|112959508|gb|ABI27281.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 103 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 161
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 162 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 221
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 222 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 281
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 282 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 312
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 203
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 204 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 263
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 264 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 323
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 324 WLSAGHNQISDLTPLANLTRITQLGLND 351
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 45 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 104
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 105 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 164
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 165 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 224
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 225 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 283
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 284 YFNNISDISPVSS 296
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 144
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 145 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 204
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 205 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 246
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 143
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 189
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 11 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 67
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 68 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 127
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 128 LSFG-NQVTD 136
>gi|167861924|gb|ACA05661.1| InlA [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLSDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLSDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNL+ L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLSDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLSDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 94/189 (49%), Gaps = 22/189 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLSDLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 286 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 345
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 346 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 405
Query: 214 NLTQLYLSE 222
+TQL L++
Sbjct: 406 RITQLGLND 414
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|223698622|gb|ACN18988.1| internalin A [Listeria monocytogenes]
gi|223698634|gb|ACN18996.1| internalin A [Listeria monocytogenes]
gi|223698694|gb|ACN19036.1| internalin A [Listeria monocytogenes]
gi|223698712|gb|ACN19048.1| internalin A [Listeria monocytogenes]
gi|223698745|gb|ACN19070.1| internalin A [Listeria monocytogenes]
gi|223698751|gb|ACN19074.1| internalin A [Listeria monocytogenes]
gi|223698766|gb|ACN19084.1| internalin A [Listeria monocytogenes]
gi|223698769|gb|ACN19086.1| internalin A [Listeria monocytogenes]
gi|223698772|gb|ACN19088.1| internalin A [Listeria monocytogenes]
gi|223698775|gb|ACN19090.1| internalin A [Listeria monocytogenes]
gi|223698778|gb|ACN19092.1| internalin A [Listeria monocytogenes]
gi|223698787|gb|ACN19098.1| internalin A [Listeria monocytogenes]
gi|223698793|gb|ACN19102.1| internalin A [Listeria monocytogenes]
gi|223698799|gb|ACN19106.1| internalin A [Listeria monocytogenes]
gi|223698802|gb|ACN19108.1| internalin A [Listeria monocytogenes]
gi|223698805|gb|ACN19110.1| internalin A [Listeria monocytogenes]
gi|223698817|gb|ACN19118.1| internalin A [Listeria monocytogenes]
gi|223698859|gb|ACN19146.1| internalin A [Listeria monocytogenes]
gi|223698865|gb|ACN19150.1| internalin A [Listeria monocytogenes]
gi|223698979|gb|ACN19226.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|219821279|gb|ACL37764.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 50 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 109
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 110 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 169
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 170 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 229
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 230 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 288
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 289 YFNNISDISPVSS 301
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 195 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 254
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 255 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 314
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 315 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 360
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|194239392|emb|CAQ76836.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|112961697|gb|ABI28484.1| internalin A [Listeria monocytogenes]
gi|112961709|gb|ABI28492.1| internalin A [Listeria monocytogenes]
gi|112961730|gb|ABI28506.1| internalin A [Listeria monocytogenes]
gi|112961760|gb|ABI28526.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 117 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 175
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 176 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 235
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 236 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 295
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 296 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 326
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 217
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 218 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 277
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 278 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 337
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 338 WLSAGHNQISDLTPLANLTRITQLGLND 365
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 59 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 118
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 119 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 178
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 179 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 238
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 239 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 297
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 298 YFNNISDISPVSS 310
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 158
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 159 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 218
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 219 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 260
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 157
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 203
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 25 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 81
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 82 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 141
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 142 LSFG-NQVTD 150
>gi|112961610|gb|ABI28426.1| internalin A [Listeria monocytogenes]
gi|112961613|gb|ABI28428.1| internalin A [Listeria monocytogenes]
gi|112961625|gb|ABI28436.1| internalin A [Listeria monocytogenes]
gi|112961628|gb|ABI28438.1| internalin A [Listeria monocytogenes]
gi|112961631|gb|ABI28440.1| internalin A [Listeria monocytogenes]
gi|112961634|gb|ABI28442.1| internalin A [Listeria monocytogenes]
gi|112961670|gb|ABI28466.1| internalin A [Listeria monocytogenes]
gi|112961673|gb|ABI28468.1| internalin A [Listeria monocytogenes]
gi|112961676|gb|ABI28470.1| internalin A [Listeria monocytogenes]
gi|112961688|gb|ABI28478.1| internalin A [Listeria monocytogenes]
gi|112961703|gb|ABI28488.1| internalin A [Listeria monocytogenes]
gi|112961712|gb|ABI28494.1| internalin A [Listeria monocytogenes]
gi|112961715|gb|ABI28496.1| internalin A [Listeria monocytogenes]
gi|112961724|gb|ABI28502.1| internalin A [Listeria monocytogenes]
gi|112961733|gb|ABI28508.1| internalin A [Listeria monocytogenes]
gi|112961736|gb|ABI28510.1| internalin A [Listeria monocytogenes]
gi|112961739|gb|ABI28512.1| internalin A [Listeria monocytogenes]
gi|112961742|gb|ABI28514.1| internalin A [Listeria monocytogenes]
gi|112961745|gb|ABI28516.1| internalin A [Listeria monocytogenes]
gi|112961754|gb|ABI28522.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 117 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 175
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 176 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 235
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 236 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 295
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 296 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 335
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 217
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 218 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 277
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 278 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 337
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 338 WLSAGHNQISDLTPLANLTRITQLGLND 365
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 59 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 118
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 119 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 178
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 179 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 238
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 239 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 297
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 298 YFNNISDISPVSS 310
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 98
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 158
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 159 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 218
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 219 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 260
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 98
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 157
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 203
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 25 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 81
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 82 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 141
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 142 LSFG-NQVTD 150
>gi|22347546|gb|AAM95918.1| internalin A precursor [Listeria monocytogenes]
gi|22347550|gb|AAM95920.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 110 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 168
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 169 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 228
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 229 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 288
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 289 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 319
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 210
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 211 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 270
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 271 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 330
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 331 WLSAGHNQISDLTPLANLTRITQLGLND 358
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 52 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 111
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 112 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 171
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 172 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 231
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 232 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 290
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 291 YFNNISDISPVSS 303
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 32 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 91
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 151
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 152 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 211
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 212 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 253
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 32 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 91
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 150
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 196
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 197 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 256
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 257 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 316
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 317 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 362
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 18 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 74
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 75 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 134
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 135 LSFG-NQVTD 143
>gi|223698892|gb|ACN19168.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|219821339|gb|ACL37804.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 50 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 109
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 110 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 169
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 170 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 229
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 230 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 288
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 289 YFNNISDISPVSS 301
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|219821288|gb|ACL37770.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQ 268
L +N+IS + +A+LT + + +ND +
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLNDQE 358
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 50 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 109
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 110 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 169
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 170 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 229
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 230 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 288
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 289 YFNNISDISPVSS 301
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|219821276|gb|ACL37762.1| internalin A [Listeria monocytogenes]
gi|219821336|gb|ACL37802.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 50 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 109
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 110 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 169
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 170 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 229
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 230 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 288
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 289 YFNNISDISPVSS 301
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|219821363|gb|ACL37820.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 50 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDINPLKNLTNLN 109
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 110 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 169
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 170 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 229
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 230 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 288
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 289 YFNNISDISPVSS 301
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I + +L L LEL N I I L GLT+L++L G
Sbjct: 90 TLFNNQITDINPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDINPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 195 ILSLQCNRL--RTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQN 252
+ +LQ +RL ++I+ LE L NLTQ+ S N LT I L KL + + N+I+ I
Sbjct: 20 VTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITP 79
Query: 253 IAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+A+L+ L + +NQ++D +N L+N L + L N ++
Sbjct: 80 LANLSNLTGLTLFNNQITD---INPLKNLTNLNRLELSSNTIS 119
>gi|112959536|gb|ABI27295.1| internalin A [Listeria monocytogenes]
gi|112959546|gb|ABI27300.1| internalin A [Listeria monocytogenes]
Length = 734
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 103 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 161
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 162 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 221
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 222 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 281
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 282 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 312
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 203
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 204 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 263
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 264 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 323
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 324 WLSAGHNQISDLTPLANLTRITQLGLND 351
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 45 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 104
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 105 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 164
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 165 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 224
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 225 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 283
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 284 YFNNISDISPVSS 296
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 144
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 145 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 204
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 205 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 246
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 143
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 189
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 11 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 67
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 68 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 127
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 128 LSFG-NQVTD 136
>gi|298359950|gb|ADI77554.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|340052077|emb|CBY84390.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|313485056|gb|ADR53002.1| InlA [Listeria monocytogenes]
Length = 789
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|112961790|gb|ABI28546.1| internalin A [Listeria monocytogenes]
Length = 693
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 62 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 120
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 121 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 180
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 181 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 240
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 241 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 271
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 103 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 162
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 163 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 222
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 223 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 282
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 283 WLSAGHNQISDLTPLANLTRITQLGLND 310
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 4 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 63
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 64 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 123
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 124 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 183
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 184 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 242
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 243 YFNNISDISPVSS 255
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 90 DNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKL 149
+NQLT I L L L + ++ N+I +I L +L NL L L +N+I+ I+ + +L L
Sbjct: 3 NNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNL 62
Query: 150 KVLELGDNKIRIIENLDGLTNLEELYLG---------------------KNKISRIDNLA 188
LEL N I I L GLT+L++L G NK+S I LA
Sbjct: 63 NRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLA 122
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L L N++ I L LTNL +L L+ N L I L S L LD+A N+IS
Sbjct: 123 KLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQIS 182
Query: 249 IIQNIAHLTELQEFWINDNQVSD 271
+ ++ LT+L E + NQ+S+
Sbjct: 183 NLAPLSGLTKLTELKLGANQISN 205
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 89/171 (52%), Gaps = 1/171 (0%)
Query: 110 LSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLT 169
S N++ +I L L L + + +N+I+ I + +L L L L +N+I I+ L LT
Sbjct: 1 FSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLT 60
Query: 170 NLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NL L L N IS I L+ LT L LS N++ ++ L LT L +L +S N ++ I
Sbjct: 61 NLNRLELSSNTISDISALSGLTSLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDIS 119
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
L LE+L N+IS I + LT L E +N NQ+ D T+ L N
Sbjct: 120 VLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTN 170
>gi|298360230|gb|ADI77694.1| internalin A [Listeria monocytogenes]
gi|298360588|gb|ADI77873.1| internalin A [Listeria monocytogenes]
gi|298360606|gb|ADI77882.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|404412528|ref|YP_006698115.1| internalin A [Listeria monocytogenes SLCC7179]
gi|298360000|gb|ADI77579.1| internalin A [Listeria monocytogenes]
gi|298360676|gb|ADI77917.1| internalin A [Listeria monocytogenes]
gi|404238227|emb|CBY59628.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC7179]
gi|443428842|gb|AGC92220.1| internalin A [Listeria monocytogenes]
gi|443428848|gb|AGC92223.1| internalin A [Listeria monocytogenes]
gi|443428858|gb|AGC92228.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|47096455|ref|ZP_00234048.1| internalin A precursor [Listeria monocytogenes str. 1/2a F6854]
gi|254913677|ref|ZP_05263689.1| internalin A [Listeria monocytogenes J2818]
gi|254937992|ref|ZP_05269689.1| internalin A [Listeria monocytogenes F6900]
gi|386046091|ref|YP_005964423.1| internalin A [Listeria monocytogenes J0161]
gi|47015176|gb|EAL06116.1| internalin A precursor [Listeria monocytogenes str. 1/2a F6854]
gi|194239410|emb|CAQ76845.1| internalin A [Listeria monocytogenes]
gi|223006792|gb|ACM69353.1| internalin A [Listeria monocytogenes]
gi|223006794|gb|ACM69354.1| internalin A [Listeria monocytogenes]
gi|258610604|gb|EEW23212.1| internalin A [Listeria monocytogenes F6900]
gi|293591690|gb|EFG00025.1| internalin A [Listeria monocytogenes J2818]
gi|298359952|gb|ADI77555.1| internalin A [Listeria monocytogenes]
gi|298359956|gb|ADI77557.1| internalin A [Listeria monocytogenes]
gi|298359986|gb|ADI77572.1| internalin A [Listeria monocytogenes]
gi|298360086|gb|ADI77622.1| internalin A [Listeria monocytogenes]
gi|298360130|gb|ADI77644.1| internalin A [Listeria monocytogenes]
gi|298360206|gb|ADI77682.1| internalin A [Listeria monocytogenes]
gi|298360572|gb|ADI77865.1| internalin A [Listeria monocytogenes]
gi|298360644|gb|ADI77901.1| internalin A [Listeria monocytogenes]
gi|345533082|gb|AEO02523.1| internalin A [Listeria monocytogenes J0161]
gi|443428774|gb|AGC92186.1| internalin A [Listeria monocytogenes]
gi|443428776|gb|AGC92187.1| internalin A [Listeria monocytogenes]
gi|443428868|gb|AGC92233.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|371942110|gb|AEX60867.1| internaline [Listeria monocytogenes]
gi|371942112|gb|AEX60868.1| internaline [Listeria monocytogenes]
Length = 789
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|290350830|dbj|BAI78336.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLTPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLTPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LTPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLTPLSGLTKLTELKLGANQISN 309
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLTPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|223698682|gb|ACN19028.1| internalin A [Listeria monocytogenes]
Length = 712
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|167861900|gb|ACA05649.1| InlA [Listeria monocytogenes]
gi|194326161|emb|CAQ77239.1| internalin A [Listeria monocytogenes]
gi|298360364|gb|ADI77761.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|130774791|gb|ABO32410.1| InlA [Listeria monocytogenes]
gi|298360240|gb|ADI77699.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|149242645|pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 131 LNRLELSSNTISDISALSGLTSLQQLN-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 189
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 190 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 249
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 250 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 309
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 310 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 349
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 73 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 132
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 133 RLELSSNTISDISALSGLTSLQQLNFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 192
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 193 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 252
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 253 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 311
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 312 YFNNISDISPVSS 324
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 172 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 231
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 232 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 291
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 292 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 351
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 352 WLSAGHNQISDLTPLANLTRITQLGLND 379
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 53 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 112
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 113 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFG-NQVTDLKPLANL 171
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 172 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 217
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 191 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 250
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 251 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 310
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 311 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 370
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 371 RITQLGLNDQAWT 383
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 40 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 96
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 97 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 156
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 157 NFG-NQVTD 164
>gi|22347552|gb|AAM95921.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 110 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 168
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 169 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 228
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 229 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 288
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 289 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 319
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 210
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 211 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 270
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 271 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 330
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 331 WLSAGHNQISDLTPLANLTRITQLGLND 358
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 52 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 111
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 112 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 171
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 172 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 231
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 232 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 290
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 291 YFNNISDISPVSS 303
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 32 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 91
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 151
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 152 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 211
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 212 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 253
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 32 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 91
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 150
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 196
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 18 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 74
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 75 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 134
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 135 LSFG-NQVTD 143
>gi|85679236|gb|ABC72034.1| InlA [Listeria monocytogenes]
Length = 794
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 165 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 223
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 224 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 283
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 284 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 343
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 344 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 374
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 265
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 266 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 325
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 326 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 385
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 386 WLSAGHNQISDLTPLANLTRITQLGLND 413
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 107 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 166
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 167 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 226
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 227 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 286
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 287 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 345
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 346 YFNNISDISPVSS 358
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 146
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 147 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 206
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 207 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 266
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 267 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 308
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 146
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 147 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 251
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 252 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 311
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 312 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 371
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 372 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 417
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 73 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 129
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 130 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 189
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 190 LSFG-NQVTD 198
>gi|290350826|dbj|BAI78334.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|223698658|gb|ACN19012.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|148607496|gb|ABQ95524.1| InlA [Listeria monocytogenes]
Length = 730
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|219821312|gb|ACL37786.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 123/220 (55%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLASLTN 326
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L S +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLASLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 195 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 254
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 255 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 314
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LASLT +N LS N++ + L LT +TQL L++ T
Sbjct: 315 VSDVSSLASLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 360
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|150371828|dbj|BAF65703.1| internalin A [Listeria monocytogenes]
Length = 526
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 384
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +N
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 327
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 328 QLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 387
Query: 240 LDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 388 LSAGHNQISDLTPLANLTRITQLGLND 414
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 286 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 345
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 346 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 405
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 406 RITQLGLNDQAWT 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 75 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 131
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 132 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 191
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 192 SFG-NQVTD 199
>gi|130774819|gb|ABO32422.1| InlA [Listeria monocytogenes]
gi|167861894|gb|ACA05646.1| InlA [Listeria monocytogenes]
gi|167861946|gb|ACA05672.1| InlA [Listeria monocytogenes]
gi|167861948|gb|ACA05673.1| InlA [Listeria monocytogenes]
gi|194239402|emb|CAQ76841.1| internalin A [Listeria monocytogenes]
gi|298360052|gb|ADI77605.1| internalin A [Listeria monocytogenes]
gi|298360164|gb|ADI77661.1| internalin A [Listeria monocytogenes]
gi|298360372|gb|ADI77765.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|71912406|gb|AAZ53235.1| InlA [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 123/220 (55%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTSLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLASLTN 384
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTSLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTSLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L S +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLASLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 286 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTSLELNENQLEDISPISNLKNLTYLT 345
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LASLT +N LS N++ + L LT
Sbjct: 346 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLASLTNINWLSAGHNQISDLTPLANLT 405
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 406 RITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|371942116|gb|AEX60870.1| internaline [Listeria monocytogenes]
Length = 789
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|371942100|gb|AEX60862.1| internaline [Listeria monocytogenes]
Length = 789
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|130774825|gb|ABO32425.1| InlA [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|386052707|ref|YP_005970265.1| internalin A [Listeria monocytogenes Finland 1998]
gi|130774801|gb|ABO32414.1| InlA [Listeria monocytogenes]
gi|130774805|gb|ABO32415.1| InlA [Listeria monocytogenes]
gi|130774807|gb|ABO32416.1| InlA [Listeria monocytogenes]
gi|150371724|dbj|BAF65677.1| internalin A [Listeria monocytogenes]
gi|150371780|dbj|BAF65679.1| internalin A [Listeria monocytogenes]
gi|150371784|dbj|BAF65681.1| internalin A [Listeria monocytogenes]
gi|150371788|dbj|BAF65683.1| internalin A [Listeria monocytogenes]
gi|150371790|dbj|BAF65684.1| internalin A [Listeria monocytogenes]
gi|150371792|dbj|BAF65685.1| internalin A [Listeria monocytogenes]
gi|150371798|dbj|BAF65688.1| internalin A [Listeria monocytogenes]
gi|150371802|dbj|BAF65690.1| internalin A [Listeria monocytogenes]
gi|150371808|dbj|BAF65693.1| internalin A [Listeria monocytogenes]
gi|150371814|dbj|BAF65696.1| internalin A [Listeria monocytogenes]
gi|150371818|dbj|BAF65698.1| internalin A [Listeria monocytogenes]
gi|150371824|dbj|BAF65701.1| internalin A [Listeria monocytogenes]
gi|150371830|dbj|BAF65704.1| internalin A [Listeria monocytogenes]
gi|150371832|dbj|BAF65705.1| internalin A [Listeria monocytogenes]
gi|150371834|dbj|BAF65706.1| internalin A [Listeria monocytogenes]
gi|150371836|dbj|BAF65707.1| internalin A [Listeria monocytogenes]
gi|150371838|dbj|BAF65708.1| internalin A [Listeria monocytogenes]
gi|150371844|dbj|BAF65711.1| internalin A [Listeria monocytogenes]
gi|150371848|dbj|BAF65713.1| internalin A [Listeria monocytogenes]
gi|150371850|dbj|BAF65714.1| internalin A [Listeria monocytogenes]
gi|150371854|dbj|BAF65716.1| internalin A [Listeria monocytogenes]
gi|150371864|dbj|BAF65721.1| internalin A [Listeria monocytogenes]
gi|150371870|dbj|BAF65724.1| internalin A [Listeria monocytogenes]
gi|290350828|dbj|BAI78335.1| internalin A [Listeria monocytogenes]
gi|290350832|dbj|BAI78337.1| internalin A [Listeria monocytogenes]
gi|290350834|dbj|BAI78338.1| internalin A [Listeria monocytogenes]
gi|290350840|dbj|BAI78341.1| internalin A [Listeria monocytogenes]
gi|298359802|gb|ADI77480.1| internalin A [Listeria monocytogenes]
gi|298359828|gb|ADI77493.1| internalin A [Listeria monocytogenes]
gi|298359876|gb|ADI77517.1| internalin A [Listeria monocytogenes]
gi|298359878|gb|ADI77518.1| internalin A [Listeria monocytogenes]
gi|298359918|gb|ADI77538.1| internalin A [Listeria monocytogenes]
gi|298359964|gb|ADI77561.1| internalin A [Listeria monocytogenes]
gi|298359966|gb|ADI77562.1| internalin A [Listeria monocytogenes]
gi|298360014|gb|ADI77586.1| internalin A [Listeria monocytogenes]
gi|298360038|gb|ADI77598.1| internalin A [Listeria monocytogenes]
gi|298360084|gb|ADI77621.1| internalin A [Listeria monocytogenes]
gi|298360104|gb|ADI77631.1| internalin A [Listeria monocytogenes]
gi|298360134|gb|ADI77646.1| internalin A [Listeria monocytogenes]
gi|298360170|gb|ADI77664.1| internalin A [Listeria monocytogenes]
gi|298360178|gb|ADI77668.1| internalin A [Listeria monocytogenes]
gi|298360214|gb|ADI77686.1| internalin A [Listeria monocytogenes]
gi|298360242|gb|ADI77700.1| internalin A [Listeria monocytogenes]
gi|298360244|gb|ADI77701.1| internalin A [Listeria monocytogenes]
gi|298360254|gb|ADI77706.1| internalin A [Listeria monocytogenes]
gi|298360278|gb|ADI77718.1| internalin A [Listeria monocytogenes]
gi|298360310|gb|ADI77734.1| internalin A [Listeria monocytogenes]
gi|298360334|gb|ADI77746.1| internalin A [Listeria monocytogenes]
gi|298360338|gb|ADI77748.1| internalin A [Listeria monocytogenes]
gi|298360376|gb|ADI77767.1| internalin A [Listeria monocytogenes]
gi|298360384|gb|ADI77771.1| internalin A [Listeria monocytogenes]
gi|298360436|gb|ADI77797.1| internalin A [Listeria monocytogenes]
gi|298360532|gb|ADI77845.1| internalin A [Listeria monocytogenes]
gi|298360542|gb|ADI77850.1| internalin A [Listeria monocytogenes]
gi|298360552|gb|ADI77855.1| internalin A [Listeria monocytogenes]
gi|298360564|gb|ADI77861.1| internalin A [Listeria monocytogenes]
gi|298360568|gb|ADI77863.1| internalin A [Listeria monocytogenes]
gi|298360596|gb|ADI77877.1| internalin A [Listeria monocytogenes]
gi|298360666|gb|ADI77912.1| internalin A [Listeria monocytogenes]
gi|298360710|gb|ADI77934.1| internalin A [Listeria monocytogenes]
gi|346645358|gb|AEO37983.1| internalin A [Listeria monocytogenes Finland 1998]
gi|443428778|gb|AGC92188.1| internalin A [Listeria monocytogenes]
gi|443428804|gb|AGC92201.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|85679234|gb|ABC72033.1| InlA [Listeria monocytogenes]
Length = 794
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 120/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 165 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 223
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 224 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 283
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 284 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 343
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I +++LT+LQ + +N+VSD
Sbjct: 344 TLYFNNISDISPVSNLTKLQRLFFYNNKVSD 374
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/252 (35%), Positives = 126/252 (50%), Gaps = 26/252 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 107 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 166
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 167 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 226
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 227 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 286
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 287 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 345
Query: 288 YL----DRNPVA 295
Y D +PV+
Sbjct: 346 YFNNISDISPVS 357
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 113/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 265
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 266 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 325
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + LT L +L+ N ++ + +L + +
Sbjct: 326 NQLEDISPISNLKNLTYLTLYFNNISDISPVSNLTKLQRLFFYNNKVSDVSSLANLTNIN 385
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 386 WLSAGHNQISDLTPLANLTRITQLGLND 413
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 146
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 147 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 206
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 207 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 266
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 267 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 308
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 146
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 147 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 251
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 73 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 129
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 130 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 189
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 190 LSFG-NQVTD 198
>gi|126143308|gb|ABN80096.1| InlA [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 114/210 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQ 268
L +N+IS + +A+LT + +ND +
Sbjct: 387 WLSAGHNQISDLTPLANLTRITPLGLNDQE 416
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|56797877|emb|CAH04900.1| internalin A [Listeria monocytogenes]
Length = 792
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 158 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 216
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 217 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 276
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 277 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 336
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 337 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 367
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 199 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 258
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 259 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 318
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 319 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 378
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 379 WLSAGHNQISDLTPLANLTRITQLGLND 406
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 125/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L NL L L N+I +I L +L NL
Sbjct: 100 NQLTDITPLKDLTKLVDILMNNNQIADITPLANSSNLTGLTLFNNQITDIDPLKNLTNLN 159
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 160 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 219
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 220 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 279
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 280 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 338
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 339 YFNNISDISPVSS 351
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L + +NL L
Sbjct: 80 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANSSNLTGL 139
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 140 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 199
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 200 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 259
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 260 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 301
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L +NL L
Sbjct: 80 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANSSNLTGL 139
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 140 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 198
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 199 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 244
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 66 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 122
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L +NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 123 QIADITPLANSSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 182
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 183 LSFG-NQVTD 191
>gi|22347570|gb|AAM95930.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 123/220 (55%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 110 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 168
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 169 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 228
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 229 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 288
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 289 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLASLTN 328
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 69 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 128
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 129 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 188 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 247
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 248 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 303
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 210
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 211 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 270
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L S +
Sbjct: 271 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLASLTNIN 330
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 331 WLSAGHNQISDLTPLANLTRITQLGLND 358
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 32 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 91
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 151
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 152 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 211
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 212 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 253
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 32 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 91
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 150
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 196
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 197 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 256
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 257 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 316
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LASLT +N LS N++ + L LT +TQL L++ T
Sbjct: 317 VSDVSSLASLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 362
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 18 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 74
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 75 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 134
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 135 LSFG-NQVTD 143
>gi|443428838|gb|AGC92218.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|371942136|gb|AEX60880.1| internaline [Listeria monocytogenes]
Length = 789
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|148607492|gb|ABQ95522.1| InlA [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|38154344|gb|AAR12159.1| internalin A [Listeria monocytogenes]
Length = 685
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 110 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 168
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 169 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 228
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 229 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 288
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 289 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 319
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 210
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 211 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 270
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 271 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 330
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 331 WLSAGHNQISDLTPLANLTRITQLGLND 358
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 52 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 111
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 112 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 171
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 172 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 231
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 232 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 290
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 291 YFNNISDISPVSS 303
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 32 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 91
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 92 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 151
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 152 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 211
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 212 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 253
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 32 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 91
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 92 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 150
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 196
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 197 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 256
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 257 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 316
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 317 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 362
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 18 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 74
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 75 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 134
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 135 LSFG-NQVTD 143
>gi|322952096|gb|ADX21047.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|313485058|gb|ADR53003.1| InlA [Listeria monocytogenes]
Length = 765
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|298359882|gb|ADI77520.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|112961793|gb|ABI28548.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 62 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 120
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 121 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 180
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 181 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 240
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 241 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 271
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 103 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 162
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 163 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 222
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 223 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 282
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 283 WLSAGHNQISDLTPLANLTRITQLGLND 310
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 4 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 63
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 64 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 123
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 124 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 183
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 184 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 242
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 243 YFNNISDISPVSS 255
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 104/203 (51%), Gaps = 21/203 (10%)
Query: 90 DNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKL 149
+NQLT I L L L + ++ N+I +I L +L+NL L L +N+I+ I+ + +L L
Sbjct: 3 NNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNL 62
Query: 150 KVLELGDNKIRIIENLDGLTNLEELYLG---------------------KNKISRIDNLA 188
LEL N I I L GLT+L++L G NK+S I LA
Sbjct: 63 NRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLA 122
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L L N++ I L LTNL +L L+ N L I L S L LD+A N+IS
Sbjct: 123 KLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQIS 182
Query: 249 IIQNIAHLTELQEFWINDNQVSD 271
+ ++ LT+L E + NQ+S+
Sbjct: 183 NLAPLSGLTKLTELKLGANQISN 205
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 89/171 (52%), Gaps = 1/171 (0%)
Query: 110 LSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLT 169
S N++ +I L L L + + +N+I+ I + +L L L L +N+I I+ L LT
Sbjct: 1 FSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLT 60
Query: 170 NLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NL L L N IS I L+ LT L LS N++ ++ L LT L +L +S N ++ I
Sbjct: 61 NLNRLELSSNTISDISALSGLTSLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDIS 119
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
L LE+L N+IS I + LT L E +N NQ+ D T+ L N
Sbjct: 120 VLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTN 170
>gi|167862002|gb|ACA05700.1| InlA [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|255028812|ref|ZP_05300763.1| internalin A [Listeria monocytogenes LO28]
Length = 502
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 158 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 216
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 217 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 276
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 277 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 336
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 337 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 376
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 100 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 159
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 160 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 219
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 220 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 279
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 280 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 338
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 339 YFNNISDISPVSS 351
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 200 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 259
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +N
Sbjct: 260 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 319
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 320 QLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 379
Query: 240 LDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 380 LSAGHNQISDLTPLANLTRITQLGLND 406
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 80 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 139
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 140 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 198
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 199 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 244
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 218 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 277
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 278 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 337
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 338 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 397
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 398 RITQLGLNDQAWT 410
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 67 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 123
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 124 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 183
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 184 SFG-NQVTD 191
>gi|130774809|gb|ABO32417.1| InlA [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|16802477|ref|NP_463962.1| internalin A [Listeria monocytogenes EGD-e]
gi|386049359|ref|YP_005967350.1| internalin-A [Listeria monocytogenes FSL R2-561]
gi|404282867|ref|YP_006683764.1| internalin A [Listeria monocytogenes SLCC2372]
gi|403399437|sp|P0DJM0.1|INLA_LISMO RecName: Full=Internalin-A; Flags: Precursor
gi|12054782|emb|CAC20628.1| internalin A [Listeria monocytogenes]
gi|16409810|emb|CAC98512.1| Internalin A [Listeria monocytogenes EGD-e]
gi|130774817|gb|ABO32421.1| InlA [Listeria monocytogenes]
gi|130774821|gb|ABO32423.1| InlA [Listeria monocytogenes]
gi|130774823|gb|ABO32424.1| InlA [Listeria monocytogenes]
gi|150371782|dbj|BAF65680.1| internalin A [Listeria monocytogenes]
gi|150371794|dbj|BAF65686.1| internalin A [Listeria monocytogenes]
gi|150371804|dbj|BAF65691.1| internalin A [Listeria monocytogenes]
gi|150371820|dbj|BAF65699.1| internalin A [Listeria monocytogenes]
gi|150371846|dbj|BAF65712.1| internalin A [Listeria monocytogenes]
gi|150371852|dbj|BAF65715.1| internalin A [Listeria monocytogenes]
gi|150371856|dbj|BAF65717.1| internalin A [Listeria monocytogenes]
gi|150371860|dbj|BAF65719.1| internalin A [Listeria monocytogenes]
gi|150371868|dbj|BAF65723.1| internalin A [Listeria monocytogenes]
gi|167861980|gb|ACA05689.1| InlA [Listeria monocytogenes]
gi|194239382|emb|CAQ76831.1| internalin A [Listeria monocytogenes]
gi|298359818|gb|ADI77488.1| internalin A [Listeria monocytogenes]
gi|298359832|gb|ADI77495.1| internalin A [Listeria monocytogenes]
gi|298360054|gb|ADI77606.1| internalin A [Listeria monocytogenes]
gi|298360128|gb|ADI77643.1| internalin A [Listeria monocytogenes]
gi|298360212|gb|ADI77685.1| internalin A [Listeria monocytogenes]
gi|298360216|gb|ADI77687.1| internalin A [Listeria monocytogenes]
gi|298360256|gb|ADI77707.1| internalin A [Listeria monocytogenes]
gi|298360522|gb|ADI77840.1| internalin A [Listeria monocytogenes]
gi|346423205|gb|AEO24730.1| internalin-A [Listeria monocytogenes FSL R2-561]
gi|404232369|emb|CBY53772.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2372]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|322952083|gb|ADX21041.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|313485075|gb|ADR53008.1| InlA [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|167861888|gb|ACA05643.1| InlA [Listeria monocytogenes]
gi|194326163|emb|CAQ77240.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|46906689|ref|YP_013078.1| internalin A [Listeria monocytogenes serotype 4b str. F2365]
gi|254932755|ref|ZP_05266114.1| internalin A [Listeria monocytogenes HPB2262]
gi|405748809|ref|YP_006672275.1| internalin A [Listeria monocytogenes ATCC 19117]
gi|405751670|ref|YP_006675135.1| internalin A [Listeria monocytogenes SLCC2378]
gi|417316727|ref|ZP_12103366.1| internalin A [Listeria monocytogenes J1-220]
gi|424713328|ref|YP_007014043.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|424822183|ref|ZP_18247196.1| Internalin-A [Listeria monocytogenes str. Scott A]
gi|50400895|sp|Q723K6.1|INLA_LISMF RecName: Full=Internalin-A; Flags: Precursor
gi|46879954|gb|AAT03255.1| internalin A [Listeria monocytogenes serotype 4b str. F2365]
gi|130774757|gb|ABO32393.1| InlA [Listeria monocytogenes]
gi|130774763|gb|ABO32396.1| InlA [Listeria monocytogenes]
gi|130774781|gb|ABO32405.1| InlA [Listeria monocytogenes]
gi|130774785|gb|ABO32407.1| InlA [Listeria monocytogenes]
gi|130774789|gb|ABO32409.1| InlA [Listeria monocytogenes]
gi|167861870|gb|ACA05634.1| InlA [Listeria monocytogenes]
gi|167861880|gb|ACA05639.1| InlA [Listeria monocytogenes]
gi|167861882|gb|ACA05640.1| InlA [Listeria monocytogenes]
gi|167861884|gb|ACA05641.1| InlA [Listeria monocytogenes]
gi|167861886|gb|ACA05642.1| InlA [Listeria monocytogenes]
gi|167861896|gb|ACA05647.1| InlA [Listeria monocytogenes]
gi|167861898|gb|ACA05648.1| InlA [Listeria monocytogenes]
gi|167861910|gb|ACA05654.1| InlA [Listeria monocytogenes]
gi|167861912|gb|ACA05655.1| InlA [Listeria monocytogenes]
gi|167861952|gb|ACA05675.1| InlA [Listeria monocytogenes]
gi|167861958|gb|ACA05678.1| InlA [Listeria monocytogenes]
gi|167861960|gb|ACA05679.1| InlA [Listeria monocytogenes]
gi|167861966|gb|ACA05682.1| InlA [Listeria monocytogenes]
gi|167861988|gb|ACA05693.1| InlA [Listeria monocytogenes]
gi|167861996|gb|ACA05697.1| InlA [Listeria monocytogenes]
gi|167862008|gb|ACA05703.1| InlA [Listeria monocytogenes]
gi|167862010|gb|ACA05704.1| InlA [Listeria monocytogenes]
gi|167862014|gb|ACA05706.1| InlA [Listeria monocytogenes]
gi|167862016|gb|ACA05707.1| InlA [Listeria monocytogenes]
gi|194239380|emb|CAQ76830.1| internalin A [Listeria monocytogenes]
gi|194239394|emb|CAQ76837.1| internalin A [Listeria monocytogenes]
gi|194326167|emb|CAQ77242.1| internalin A [Listeria monocytogenes]
gi|223006786|gb|ACM69350.1| internalin A [Listeria monocytogenes]
gi|223006788|gb|ACM69351.1| internalin A [Listeria monocytogenes]
gi|223006798|gb|ACM69356.1| internalin A [Listeria monocytogenes]
gi|223006804|gb|ACM69359.1| internalin A [Listeria monocytogenes]
gi|223006810|gb|ACM69362.1| internalin A [Listeria monocytogenes]
gi|293584308|gb|EFF96340.1| internalin A [Listeria monocytogenes HPB2262]
gi|294358391|gb|ADE73848.1| InlA [Listeria monocytogenes]
gi|294358403|gb|ADE73854.1| InlA [Listeria monocytogenes]
gi|298359884|gb|ADI77521.1| internalin A [Listeria monocytogenes]
gi|298359898|gb|ADI77528.1| internalin A [Listeria monocytogenes]
gi|298359902|gb|ADI77530.1| internalin A [Listeria monocytogenes]
gi|298359908|gb|ADI77533.1| internalin A [Listeria monocytogenes]
gi|298359940|gb|ADI77549.1| internalin A [Listeria monocytogenes]
gi|298359948|gb|ADI77553.1| internalin A [Listeria monocytogenes]
gi|298360056|gb|ADI77607.1| internalin A [Listeria monocytogenes]
gi|298360094|gb|ADI77626.1| internalin A [Listeria monocytogenes]
gi|298360148|gb|ADI77653.1| internalin A [Listeria monocytogenes]
gi|298360270|gb|ADI77714.1| internalin A [Listeria monocytogenes]
gi|298360288|gb|ADI77723.1| internalin A [Listeria monocytogenes]
gi|298360324|gb|ADI77741.1| internalin A [Listeria monocytogenes]
gi|298360326|gb|ADI77742.1| internalin A [Listeria monocytogenes]
gi|298360350|gb|ADI77754.1| internalin A [Listeria monocytogenes]
gi|298360362|gb|ADI77760.1| internalin A [Listeria monocytogenes]
gi|298360456|gb|ADI77807.1| internalin A [Listeria monocytogenes]
gi|298360480|gb|ADI77819.1| internalin A [Listeria monocytogenes]
gi|298360508|gb|ADI77833.1| internalin A [Listeria monocytogenes]
gi|298360520|gb|ADI77839.1| internalin A [Listeria monocytogenes]
gi|298360554|gb|ADI77856.1| internalin A [Listeria monocytogenes]
gi|298360632|gb|ADI77895.1| internalin A [Listeria monocytogenes]
gi|298360634|gb|ADI77896.1| internalin A [Listeria monocytogenes]
gi|298360662|gb|ADI77910.1| internalin A [Listeria monocytogenes]
gi|328475915|gb|EGF46639.1| internalin A [Listeria monocytogenes J1-220]
gi|332310863|gb|EGJ23958.1| Internalin-A [Listeria monocytogenes str. Scott A]
gi|340052073|emb|CBY84388.1| internalin A [Listeria monocytogenes]
gi|340052075|emb|CBY84389.1| internalin A [Listeria monocytogenes]
gi|404218009|emb|CBY69373.1| internalin A (LPXTG motif) [Listeria monocytogenes ATCC 19117]
gi|404220870|emb|CBY72233.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2378]
gi|424012512|emb|CCO63052.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|443428812|gb|AGC92205.1| internalin A [Listeria monocytogenes]
gi|443428814|gb|AGC92206.1| internalin A [Listeria monocytogenes]
gi|443428816|gb|AGC92207.1| internalin A [Listeria monocytogenes]
gi|443428818|gb|AGC92208.1| internalin A [Listeria monocytogenes]
gi|443428826|gb|AGC92212.1| internalin A [Listeria monocytogenes]
gi|443428836|gb|AGC92217.1| internalin A [Listeria monocytogenes]
gi|443428840|gb|AGC92219.1| internalin A [Listeria monocytogenes]
gi|443428852|gb|AGC92225.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|340052071|emb|CBY84387.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|313485065|gb|ADR53005.1| InlA [Listeria monocytogenes]
Length = 801
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|167862032|gb|ACA05715.1| InlA [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|219821372|gb|ACL37826.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 50 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 109
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 110 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 169
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 170 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 229
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 230 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 288
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 289 YFNNISDISPVSS 301
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 195 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 254
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 255 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 314
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 315 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 360
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|322952092|gb|ADX21045.1| internalin A [Listeria monocytogenes]
gi|322952094|gb|ADX21046.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|167861908|gb|ACA05653.1| InlA [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+I+ + +A+LT + + +ND
Sbjct: 387 WLSAGHNQITDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|167861906|gb|ACA05652.1| InlA [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|255025517|ref|ZP_05297503.1| internalin A [Listeria monocytogenes FSL J2-003]
Length = 744
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|130774793|gb|ABO32411.1| InlA [Listeria monocytogenes]
gi|194239384|emb|CAQ76832.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|56797879|emb|CAH04901.1| internalin A [Listeria monocytogenes]
Length = 483
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 158 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 216
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 217 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 276
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 277 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 336
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 337 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 376
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 100 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 159
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 160 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 219
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 220 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 279
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 280 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 338
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 339 YFNNISDISPVSS 351
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 200 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 259
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +N
Sbjct: 260 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 319
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 320 QLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 379
Query: 240 LDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 380 LSAGHNQISDLTPLANLTRITQLGLND 406
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 80 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 139
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 140 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 198
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 199 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 244
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 218 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 277
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 278 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 337
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 338 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 397
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 398 RITQLGLNDQAWT 410
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N+
Sbjct: 67 LDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQ 123
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 124 IADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 183
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 184 SFG-NQVTD 191
>gi|223006796|gb|ACM69355.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|219821282|gb|ACL37766.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I +L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISSLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 134/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I ++A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISSLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 115/208 (55%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I +L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISSLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 96/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 168 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 227
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I ++ L L LEL +N+ I I NL
Sbjct: 228 SNLAPLSGLTKLTELKLGANQISNISSLAGLTALTNLELNENQLEDISPISNLKNLTYLT 287
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 288 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 347
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 348 RITQLGLNDQAWT 360
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|313485072|gb|ADR53007.1| InlA [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|313485070|gb|ADR53006.1| InlA [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|148607482|gb|ABQ95519.1| InlA [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|371942096|gb|AEX60860.1| internaline [Listeria monocytogenes]
Length = 790
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|130774769|gb|ABO32399.1| InlA [Listeria monocytogenes]
gi|130774773|gb|ABO32401.1| InlA [Listeria monocytogenes]
gi|167861932|gb|ACA05665.1| InlA [Listeria monocytogenes]
gi|167861992|gb|ACA05695.1| InlA [Listeria monocytogenes]
gi|167861994|gb|ACA05696.1| InlA [Listeria monocytogenes]
gi|167861998|gb|ACA05698.1| InlA [Listeria monocytogenes]
gi|167862004|gb|ACA05701.1| InlA [Listeria monocytogenes]
gi|167862034|gb|ACA05716.1| InlA [Listeria monocytogenes]
gi|194326169|emb|CAQ77243.1| internalin A [Listeria monocytogenes]
gi|298359894|gb|ADI77526.1| internalin A [Listeria monocytogenes]
gi|298360034|gb|ADI77596.1| internalin A [Listeria monocytogenes]
gi|298360110|gb|ADI77634.1| internalin A [Listeria monocytogenes]
gi|298360112|gb|ADI77635.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|112961700|gb|ABI28486.1| internalin A [Listeria monocytogenes]
Length = 748
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 117 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 175
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 176 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 235
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 236 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 295
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 296 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 326
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 217
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 218 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 277
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 278 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 337
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 338 WLSAGHNQISDLTPLANLTRITQLGLND 365
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 59 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 118
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 119 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 178
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 179 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 238
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 239 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 297
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 298 YFNNISDISPVSS 310
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 158
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 159 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 218
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 219 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 260
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 157
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 203
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 25 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 81
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 82 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 141
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 142 LSFG-NQVTD 150
>gi|85679230|gb|ABC72031.1| InlA [Listeria monocytogenes]
Length = 794
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 165 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 223
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 224 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 283
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 284 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 343
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 344 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 374
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 265
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 266 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 325
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 326 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 385
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 386 WLSAGHNQISDLTPLANLTRITQLGLND 413
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 107 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 166
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 167 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 226
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 227 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 286
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 287 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 345
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 346 YFNNISDISPVSS 358
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 146
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 147 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 206
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 207 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 266
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 267 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 308
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 146
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 147 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 251
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 252 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 311
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 312 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 371
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 372 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 417
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 73 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 129
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 130 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 189
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 190 LSFG-NQVTD 198
>gi|371942126|gb|AEX60875.1| internaline [Listeria monocytogenes]
Length = 790
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|130774795|gb|ABO32412.1| InlA [Listeria monocytogenes]
gi|150371796|dbj|BAF65687.1| internalin A [Listeria monocytogenes]
gi|150371806|dbj|BAF65692.1| internalin A [Listeria monocytogenes]
gi|150371822|dbj|BAF65700.1| internalin A [Listeria monocytogenes]
gi|194326149|emb|CAQ77233.1| internalin A [Listeria monocytogenes]
gi|298359930|gb|ADI77544.1| internalin A [Listeria monocytogenes]
gi|298360322|gb|ADI77740.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|47092503|ref|ZP_00230292.1| internalin A [Listeria monocytogenes str. 4b H7858]
gi|417314487|ref|ZP_12101186.1| internalin A [Listeria monocytogenes J1816]
gi|47019095|gb|EAL09839.1| internalin A [Listeria monocytogenes str. 4b H7858]
gi|130774783|gb|ABO32406.1| InlA [Listeria monocytogenes]
gi|130774787|gb|ABO32408.1| InlA [Listeria monocytogenes]
gi|167861878|gb|ACA05638.1| InlA [Listeria monocytogenes]
gi|167861926|gb|ACA05662.1| InlA [Listeria monocytogenes]
gi|194239406|emb|CAQ76843.1| internalin A [Listeria monocytogenes]
gi|223006800|gb|ACM69357.1| internalin A [Listeria monocytogenes]
gi|223006808|gb|ACM69361.1| internalin A [Listeria monocytogenes]
gi|294358399|gb|ADE73852.1| InlA [Listeria monocytogenes]
gi|298359958|gb|ADI77558.1| internalin A [Listeria monocytogenes]
gi|298359988|gb|ADI77573.1| internalin A [Listeria monocytogenes]
gi|298360010|gb|ADI77584.1| internalin A [Listeria monocytogenes]
gi|298360208|gb|ADI77683.1| internalin A [Listeria monocytogenes]
gi|298360370|gb|ADI77764.1| internalin A [Listeria monocytogenes]
gi|298360402|gb|ADI77780.1| internalin A [Listeria monocytogenes]
gi|298360472|gb|ADI77815.1| internalin A [Listeria monocytogenes]
gi|298360544|gb|ADI77851.1| internalin A [Listeria monocytogenes]
gi|298360592|gb|ADI77875.1| internalin A [Listeria monocytogenes]
gi|328467733|gb|EGF38785.1| internalin A [Listeria monocytogenes J1816]
gi|443428820|gb|AGC92209.1| truncated internalin A [Listeria monocytogenes]
gi|443428844|gb|AGC92221.1| truncated internalin A [Listeria monocytogenes]
gi|443428846|gb|AGC92222.1| truncated internalin A [Listeria monocytogenes]
gi|443428850|gb|AGC92224.1| truncated internalin A [Listeria monocytogenes]
gi|443428854|gb|AGC92226.1| truncated internalin A [Listeria monocytogenes]
gi|443428856|gb|AGC92227.1| truncated internalin A [Listeria monocytogenes]
Length = 797
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|371942104|gb|AEX60864.1| internaline [Listeria monocytogenes]
Length = 790
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|294358395|gb|ADE73850.1| InlA [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|223006806|gb|ACM69360.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|219821381|gb|ACL37832.1| internalin A [Listeria monocytogenes]
gi|219821384|gb|ACL37834.1| internalin A [Listeria monocytogenes]
Length = 741
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKLSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKLSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 50 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 109
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 110 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKLSDISVLAK 169
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 170 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 229
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 230 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 288
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 289 YFNNISDISPVSS 301
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKLSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 195 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 254
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 255 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 314
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 315 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 360
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|223698748|gb|ACN19072.1| truncated internalin A [Listeria monocytogenes]
gi|223698961|gb|ACN19214.1| truncated internalin A [Listeria monocytogenes]
Length = 491
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 299
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +N
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 242
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 243 QLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 302
Query: 240 LDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 303 LSAGHNQISDLTPLANLTRITQLGLND 329
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|112961772|gb|ABI28534.1| internalin A [Listeria monocytogenes]
Length = 748
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 117 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 175
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 176 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 235
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 236 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 295
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 296 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 326
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 217
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 218 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 277
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 278 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 337
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 338 WLSAGHNQISDLTPLANLTRITQLGLND 365
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 59 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 118
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 119 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 178
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 179 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 238
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 239 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 297
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 298 YFNNISDISPVSS 310
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 158
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 159 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 218
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 219 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 260
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 157
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 203
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 25 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 81
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 82 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 141
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 142 LSFG-NQVTD 150
>gi|422808574|ref|ZP_16856985.1| Internalin A [Listeria monocytogenes FSL J1-208]
gi|378752188|gb|EHY62773.1| Internalin A [Listeria monocytogenes FSL J1-208]
Length = 802
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|294358393|gb|ADE73849.1| InlA [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKEIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N+++EI
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKEI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKEIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKEIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|194326157|emb|CAQ77237.1| internalin A [Listeria monocytogenes]
gi|290350820|dbj|BAI78331.1| internalin A [Listeria monocytogenes]
gi|290350836|dbj|BAI78339.1| internalin A [Listeria monocytogenes]
gi|298360124|gb|ADI77641.1| internalin A [Listeria monocytogenes]
gi|298360394|gb|ADI77776.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|22347568|gb|AAM95929.1| internalin A precursor [Listeria monocytogenes]
Length = 743
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 110 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKLSDISV 168
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 169 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 228
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 229 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 288
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 289 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 319
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 151 TTLERLDISSNKLSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 210
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 211 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 270
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 271 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 330
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 331 WLSAGHNQISDLTPLANLTRITQLGLND 358
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 52 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 111
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 112 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKLSDISVLAK 171
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 172 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 231
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 232 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 290
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 291 YFNNISDISPVSS 303
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 32 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 91
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 150
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 151 TTLERLDISSNKLSDISVLAKLTNLESLIATNNQISDITPLGILTN 196
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 197 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 256
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 257 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 316
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 317 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 362
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 18 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 74
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 75 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 134
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 135 LSFG-NQVTD 143
>gi|223698901|gb|ACN19174.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|217965469|ref|YP_002351147.1| internalin-A [Listeria monocytogenes HCC23]
gi|386007166|ref|YP_005925444.1| internalin A [Listeria monocytogenes L99]
gi|386025755|ref|YP_005946531.1| internalin A [Listeria monocytogenes M7]
gi|167861970|gb|ACA05684.1| InlA [Listeria monocytogenes]
gi|167861982|gb|ACA05690.1| InlA [Listeria monocytogenes]
gi|217334739|gb|ACK40533.1| internalin-A [Listeria monocytogenes HCC23]
gi|307569976|emb|CAR83155.1| internalin A [Listeria monocytogenes L99]
gi|336022336|gb|AEH91473.1| internalin A [Listeria monocytogenes M7]
Length = 800
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 123/220 (55%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLASLTN 384
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L S +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLASLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LASLT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLASLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|112959444|gb|ABI27249.1| truncated internalin A [Listeria monocytogenes]
gi|112959490|gb|ABI27272.1| truncated internalin A [Listeria monocytogenes]
Length = 542
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 123/220 (55%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 103 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 161
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 162 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 221
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 222 ISNLAPLSGLTKLTGLKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 281
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 282 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 321
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 62 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 121
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 122 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 181 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTGLKLG 240
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 241 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 296
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 203
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 204 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTGLKLGANQISNISPLAGLTALTNLELNE 263
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 264 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 323
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 324 WLSAGHNQISDLTPLANLTRITQLGLND 351
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 143
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 189
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N+
Sbjct: 12 LDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQ 68
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 69 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQL 128
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 129 SFG-NQVTD 136
>gi|223698868|gb|ACN19152.1| internalin A [Listeria monocytogenes]
gi|223698898|gb|ACN19172.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|359435408|ref|ZP_09225620.1| hypothetical protein P20652_3758 [Pseudoalteromonas sp. BSi20652]
gi|357917967|dbj|GAA61869.1| hypothetical protein P20652_3758 [Pseudoalteromonas sp. BSi20652]
Length = 1283
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 117/214 (54%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
+ IE ++ + +++L LY N + I L+ L+NL+ LD+S N I ++ GL L NL +L
Sbjct: 495 VSSIEGLNAFSGIEQLALYSNNIVDISGLEGLVNLKSLDISSNSISDLSGLTSLVNLNEL 554
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
Y N IS I + L L+ L+L DN++ I +L L++L N I+ + L +L
Sbjct: 555 YASENDISDINQISALTSLRELDLRDNQVDDIASLASLSSLHTFRASSNNITDVSALTNL 614
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
LNIL L N ++ IE+LE L +L +L+L+ N ++TI ++ L +L + N I I
Sbjct: 615 VSLNILDLSYNAVQNIESLEGLVSLYELHLNHNQISTIPFTMNMPNLTSLYINDNDIDDI 674
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQL 284
++ LT L I N +SD + ++ E K
Sbjct: 675 TALSALTSLVYLNIGSNNISDISVISAAEGLKYF 708
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 139/306 (45%), Gaps = 42/306 (13%)
Query: 12 VDNDNLVTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIERLLLRWNLI 71
VDN+ + V N G +PD + +EES + L N +
Sbjct: 385 VDNEFTTVMGYPGVFNA-GTVYKFSSPDLDCNGLPCGVDKNNEESGADAVFAL----NAV 439
Query: 72 K-KIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
+ +IE H + ++L L+D+ L+ + + +NL+ ++ N G + L+ L
Sbjct: 440 RTEIE--HFYDSTRDLTLFDDALSQVSD----VNLKQCIINRN-----DGFTYAGELKSL 488
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLE------------------ 172
+ + +S IE ++ ++ L L N I I L+GL NL+
Sbjct: 489 FCGAEGVSSIEGLNAFSGIEQLALYSNNIVDISGLEGLVNLKSLDISSNSISDLSGLTSL 548
Query: 173 ----ELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTI 228
ELY +N IS I+ +++LT L L L+ N++ I +L +L++L S N +T +
Sbjct: 549 VNLNELYASENDISDINQISALTSLRELDLRDNQVDDIASLASLSSLHTFRASSNNITDV 608
Query: 229 ENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIY 288
L + L LD++YN + I+++ L L E +N NQ+S T+ N L ++Y
Sbjct: 609 SALTNLVSLNILDLSYNAVQNIESLEGLVSLYELHLNHNQIS---TIPFTMNMPNLTSLY 665
Query: 289 LDRNPV 294
++ N +
Sbjct: 666 INDNDI 671
>gi|313485054|gb|ADR53001.1| InlA [Listeria monocytogenes]
Length = 771
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|112961667|gb|ABI28464.1| truncated internalin A [Listeria monocytogenes]
Length = 556
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 123/220 (55%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 117 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 175
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 176 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 235
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 236 ISNLAPLSGLTKLTGLKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 295
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 296 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 335
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 76 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 135
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 136 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 195 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTGLKLG 254
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 255 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 310
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 217
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 218 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTGLKLGANQISNISPLAGLTALTNLELNE 277
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 278 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 337
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 338 WLSAGHNQISDLTPLANLTRITQLGLND 365
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 157
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 203
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 25 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 81
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 82 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 141
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 142 LSFG-NQVTD 150
>gi|313485052|gb|ADR53000.1| InlA [Listeria monocytogenes]
Length = 771
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|298359764|gb|ADI77461.1| truncated internalin A [Listeria monocytogenes]
gi|298359862|gb|ADI77510.1| truncated internalin A [Listeria monocytogenes]
gi|298360070|gb|ADI77614.1| truncated internalin A [Listeria monocytogenes]
gi|298360108|gb|ADI77633.1| truncated internalin A [Listeria monocytogenes]
gi|298360174|gb|ADI77666.1| truncated internalin A [Listeria monocytogenes]
gi|298360196|gb|ADI77677.1| truncated internalin A [Listeria monocytogenes]
gi|298360268|gb|ADI77713.1| truncated internalin A [Listeria monocytogenes]
gi|298360290|gb|ADI77724.1| truncated internalin A [Listeria monocytogenes]
gi|298360536|gb|ADI77847.1| truncated internalin A [Listeria monocytogenes]
gi|298360608|gb|ADI77883.1| truncated internalin A [Listeria monocytogenes]
gi|298360658|gb|ADI77908.1| truncated internalin A [Listeria monocytogenes]
gi|298360684|gb|ADI77921.1| truncated internalin A [Listeria monocytogenes]
Length = 605
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTGLKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTGLKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTGLKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|167861934|gb|ACA05666.1| InlA [Listeria monocytogenes]
gi|194326141|emb|CAQ77229.1| internalin A [Listeria monocytogenes]
Length = 538
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 384
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +N
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 327
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 328 QLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 387
Query: 240 LDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 388 LSAGHNQISDLTPLANLTRITQLGLND 414
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 286 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 345
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 346 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 405
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 406 RITQLGLNDQAWT 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 75 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 131
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 132 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 191
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 192 SFG-NQVTD 199
>gi|223698619|gb|ACN18986.1| truncated internalin A [Listeria monocytogenes]
gi|223698691|gb|ACN19034.1| truncated internalin A [Listeria monocytogenes]
gi|223698706|gb|ACN19044.1| truncated internalin A [Listeria monocytogenes]
gi|223698715|gb|ACN19050.1| truncated internalin A [Listeria monocytogenes]
gi|223698781|gb|ACN19094.1| truncated internalin A [Listeria monocytogenes]
gi|223698784|gb|ACN19096.1| truncated internalin A [Listeria monocytogenes]
gi|223698814|gb|ACN19116.1| truncated internalin A [Listeria monocytogenes]
gi|223698838|gb|ACN19132.1| truncated internalin A [Listeria monocytogenes]
gi|223698844|gb|ACN19136.1| truncated internalin A [Listeria monocytogenes]
gi|223698850|gb|ACN19140.1| truncated internalin A [Listeria monocytogenes]
gi|223698856|gb|ACN19144.1| truncated internalin A [Listeria monocytogenes]
gi|223698880|gb|ACN19160.1| truncated internalin A [Listeria monocytogenes]
gi|223698958|gb|ACN19212.1| truncated internalin A [Listeria monocytogenes]
gi|223698967|gb|ACN19218.1| truncated internalin A [Listeria monocytogenes]
gi|223698970|gb|ACN19220.1| truncated internalin A [Listeria monocytogenes]
gi|223698973|gb|ACN19222.1| truncated internalin A [Listeria monocytogenes]
gi|223698982|gb|ACN19228.1| truncated internalin A [Listeria monocytogenes]
Length = 614
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|148607488|gb|ABQ95520.1| InlA [Listeria monocytogenes]
Length = 797
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|298359722|gb|ADI77440.1| truncated internalin A [Listeria monocytogenes]
gi|298359752|gb|ADI77455.1| truncated internalin A [Listeria monocytogenes]
gi|298359762|gb|ADI77460.1| truncated internalin A [Listeria monocytogenes]
gi|298359812|gb|ADI77485.1| truncated internalin A [Listeria monocytogenes]
gi|298359814|gb|ADI77486.1| truncated internalin A [Listeria monocytogenes]
gi|298359858|gb|ADI77508.1| truncated internalin A [Listeria monocytogenes]
gi|298359886|gb|ADI77522.1| truncated internalin A [Listeria monocytogenes]
gi|298359900|gb|ADI77529.1| truncated internalin A [Listeria monocytogenes]
gi|298359906|gb|ADI77532.1| truncated internalin A [Listeria monocytogenes]
gi|298359912|gb|ADI77535.1| truncated internalin A [Listeria monocytogenes]
gi|298359944|gb|ADI77551.1| truncated internalin A [Listeria monocytogenes]
gi|298359980|gb|ADI77569.1| truncated internalin A [Listeria monocytogenes]
gi|298359990|gb|ADI77574.1| truncated internalin A [Listeria monocytogenes]
gi|298359992|gb|ADI77575.1| truncated internalin A [Listeria monocytogenes]
gi|298359994|gb|ADI77576.1| truncated internalin A [Listeria monocytogenes]
gi|298360008|gb|ADI77583.1| truncated internalin A [Listeria monocytogenes]
gi|298360026|gb|ADI77592.1| truncated internalin A [Listeria monocytogenes]
gi|298360060|gb|ADI77609.1| truncated internalin A [Listeria monocytogenes]
gi|298360078|gb|ADI77618.1| truncated internalin A [Listeria monocytogenes]
gi|298360082|gb|ADI77620.1| truncated internalin A [Listeria monocytogenes]
gi|298360096|gb|ADI77627.1| truncated internalin A [Listeria monocytogenes]
gi|298360142|gb|ADI77650.1| truncated internalin A [Listeria monocytogenes]
gi|298360144|gb|ADI77651.1| truncated internalin A [Listeria monocytogenes]
gi|298360146|gb|ADI77652.1| truncated internalin A [Listeria monocytogenes]
gi|298360160|gb|ADI77659.1| truncated internalin A [Listeria monocytogenes]
gi|298360192|gb|ADI77675.1| truncated internalin A [Listeria monocytogenes]
gi|298360252|gb|ADI77705.1| truncated internalin A [Listeria monocytogenes]
gi|298360274|gb|ADI77716.1| truncated internalin A [Listeria monocytogenes]
gi|298360276|gb|ADI77717.1| truncated internalin A [Listeria monocytogenes]
gi|298360296|gb|ADI77727.1| truncated internalin A [Listeria monocytogenes]
gi|298360304|gb|ADI77731.1| truncated internalin A [Listeria monocytogenes]
gi|298360316|gb|ADI77737.1| truncated internalin A [Listeria monocytogenes]
gi|298360320|gb|ADI77739.1| truncated internalin A [Listeria monocytogenes]
gi|298360336|gb|ADI77747.1| truncated internalin A [Listeria monocytogenes]
gi|298360342|gb|ADI77750.1| truncated internalin A [Listeria monocytogenes]
gi|298360348|gb|ADI77753.1| truncated internalin A [Listeria monocytogenes]
gi|298360374|gb|ADI77766.1| truncated internalin A [Listeria monocytogenes]
gi|298360380|gb|ADI77769.1| truncated internalin A [Listeria monocytogenes]
gi|298360404|gb|ADI77781.1| truncated internalin A [Listeria monocytogenes]
gi|298360414|gb|ADI77786.1| truncated internalin A [Listeria monocytogenes]
gi|298360426|gb|ADI77792.1| truncated internalin A [Listeria monocytogenes]
gi|298360458|gb|ADI77808.1| truncated internalin A [Listeria monocytogenes]
gi|298360464|gb|ADI77811.1| truncated internalin A [Listeria monocytogenes]
gi|298360488|gb|ADI77823.1| truncated internalin A [Listeria monocytogenes]
gi|298360492|gb|ADI77825.1| truncated internalin A [Listeria monocytogenes]
gi|298360518|gb|ADI77838.1| truncated internalin A [Listeria monocytogenes]
gi|298360538|gb|ADI77848.1| truncated internalin A [Listeria monocytogenes]
gi|298360562|gb|ADI77860.1| truncated internalin A [Listeria monocytogenes]
gi|298360594|gb|ADI77876.1| truncated internalin A [Listeria monocytogenes]
gi|298360616|gb|ADI77887.1| truncated internalin A [Listeria monocytogenes]
gi|298360654|gb|ADI77906.1| truncated internalin A [Listeria monocytogenes]
gi|298360660|gb|ADI77909.1| truncated internalin A [Listeria monocytogenes]
gi|298360668|gb|ADI77913.1| truncated internalin A [Listeria monocytogenes]
gi|298360690|gb|ADI77924.1| truncated internalin A [Listeria monocytogenes]
gi|298360696|gb|ADI77927.1| truncated internalin A [Listeria monocytogenes]
gi|298360720|gb|ADI77939.1| truncated internalin A [Listeria monocytogenes]
gi|443428784|gb|AGC92191.1| truncated internalin A [Listeria monocytogenes]
gi|443428786|gb|AGC92192.1| truncated internalin A [Listeria monocytogenes]
gi|443428790|gb|AGC92194.1| truncated internalin A [Listeria monocytogenes]
gi|443428794|gb|AGC92196.1| truncated internalin A [Listeria monocytogenes]
gi|443428808|gb|AGC92203.1| truncated internalin A [Listeria monocytogenes]
gi|443428810|gb|AGC92204.1| truncated internalin A [Listeria monocytogenes]
gi|443428828|gb|AGC92213.1| truncated internalin A [Listeria monocytogenes]
gi|443428866|gb|AGC92232.1| truncated internalin A [Listeria monocytogenes]
gi|443428874|gb|AGC92236.1| truncated internalin A [Listeria monocytogenes]
gi|443428876|gb|AGC92237.1| truncated internalin A [Listeria monocytogenes]
Length = 699
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|223698952|gb|ACN19208.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTNLQQL-FFGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 134/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 40 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 99
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L+ N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 100 LTNLQQLFF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 159 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 218
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 219 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 274
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L+ G
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLFFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL+ N +T ++ L +
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLFFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|313485081|gb|ADR53011.1| InlA [Listeria monocytogenes]
Length = 800
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQL-FFGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 134/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L+ N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLFF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L+ G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLFFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL+ N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLFFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
+ NQV+D
Sbjct: 191 LFFG-NQVTD 199
>gi|167861930|gb|ACA05664.1| InlA [Listeria monocytogenes]
gi|167862036|gb|ACA05717.1| InlA [Listeria monocytogenes]
gi|194239408|emb|CAQ76844.1| internalin A [Listeria monocytogenes]
gi|222543296|gb|ACM66668.1| internalin A [Listeria monocytogenes]
gi|298359976|gb|ADI77567.1| internalin A [Listeria monocytogenes]
gi|298360582|gb|ADI77870.1| internalin A [Listeria monocytogenes]
gi|298360712|gb|ADI77935.1| internalin A [Listeria monocytogenes]
gi|298360716|gb|ADI77937.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQL-FFGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 134/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L+ N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLFF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L+ G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLFFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL+ N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLFFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
+ NQV+D
Sbjct: 191 LFFG-NQVTD 199
>gi|313485061|gb|ADR53004.1| InlA [Listeria monocytogenes]
Length = 724
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQ 268
L +N+IS + +A+LT + + +ND +
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLNDQE 416
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|371942086|gb|AEX60855.1| truncated internaline [Listeria monocytogenes]
gi|371942128|gb|AEX60876.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 384
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +N
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 327
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 328 QLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 387
Query: 240 LDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 388 LSDGHNQISDLTPLANLTRITQLGLND 414
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 286 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 345
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 346 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSDGHNQISDLTPLANLT 405
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 406 RITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 75 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 131
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 132 IADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 191
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 192 SFG-NQVTD 199
>gi|167861940|gb|ACA05669.1| InlA [Listeria monocytogenes]
gi|167861954|gb|ACA05676.1| InlA [Listeria monocytogenes]
gi|194239400|emb|CAQ76840.1| internalin A [Listeria monocytogenes]
gi|298360640|gb|ADI77899.1| truncated internalin A [Listeria monocytogenes]
gi|298360688|gb|ADI77923.1| truncated internalin A [Listeria monocytogenes]
gi|443428860|gb|AGC92229.1| truncated internalin A [Listeria monocytogenes]
gi|443428878|gb|AGC92238.1| truncated internalin A [Listeria monocytogenes]
Length = 684
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|219821351|gb|ACL37812.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|254411888|ref|ZP_05025664.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196181610|gb|EDX76598.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 415
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 129/249 (51%), Gaps = 5/249 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L L N I I + L LK L L DNQ+T I +L L NL L L N+I +I
Sbjct: 163 LEFLNLENNQITTISPLAELQNLKRLHLEDNQITDISSLAGLQNLTWLHLEDNQITDISP 222
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L NL+ L+L N+I I + L LK LEL N+I+ I L L NL L L N+
Sbjct: 223 LSEFTNLKGLFLVLNQIKDISPLSQLTNLKALELKFNQIQDISPLAELQNLTWLDLEDNQ 282
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ I L+ LT L LSL N+++ + L LTNL +L L+ N + I L LETL
Sbjct: 283 ITDISPLSGLTNLTFLSLTYNQIQDVSPLSGLTNLKRLQLNFNQIQDISPLAELTNLETL 342
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
+ N+I+ + ++ L L +N NQ++D + ++ L N L+ ++L NP+ D
Sbjct: 343 SLNGNQITDVSPLSGLQNLNALSLNGNQITDISPLSGLTN---LKVLHLTENPIFSD--S 397
Query: 301 RRKIKLVCP 309
+ CP
Sbjct: 398 SEGAQPTCP 406
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 128/234 (54%), Gaps = 3/234 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N I I + LT L EL L NQ+ + +L L NLE L+L N+I I
Sbjct: 119 LKYLTLRRNQITDICPLTELTNLTELSLEGNQIADVNSLAELTNLEFLNLENNQITTISP 178
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL++L+L N+I+ I ++ L+ L L L DN+I I L TNL+ L+L N+
Sbjct: 179 LAELQNLKRLHLEDNQITDISSLAGLQNLTWLHLEDNQITDISPLSEFTNLKGLFLVLNQ 238
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I I L+ LT L L L+ N+++ I L L NLT L L +N +T I L L L
Sbjct: 239 IKDISPLSQLTNLKALELKFNQIQDISPLAELQNLTWLDLEDNQITDISPLSGLTNLTFL 298
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
+ YN+I + ++ LT L+ +N NQ+ D + + L N L+T+ L+ N +
Sbjct: 299 SLTYNQIQDVSPLSGLTNLKRLQLNFNQIQDISPLAELTN---LETLSLNGNQI 349
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 127/239 (53%), Gaps = 3/239 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L L N I I + LT LK L L NQ+T I L L NL L L N+I ++
Sbjct: 97 LESLHLDGNQITDICPLTELTNLKYLTLRRNQITDICPLTELTNLTELSLEGNQIADVNS 156
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L L +N+I+ I + L+ LK L L DN+I I +L GL NL L+L N+
Sbjct: 157 LAELTNLEFLNLENNQITTISPLAELQNLKRLHLEDNQITDISSLAGLQNLTWLHLEDNQ 216
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ I L+ T L L L N+++ I L LTNL L L N + I L + L L
Sbjct: 217 ITDISPLSEFTNLKGLFLVLNQIKDISPLSQLTNLKALELKFNQIQDISPLAELQNLTWL 276
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIY---LDRNPVAQ 296
D+ N+I+ I ++ LT L + NQ+ D + ++ L N K+LQ + D +P+A+
Sbjct: 277 DLEDNQITDISPLSGLTNLTFLSLTYNQIQDVSPLSGLTNLKRLQLNFNQIQDISPLAE 335
>gi|145687803|gb|ABP88874.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687809|gb|ABP88877.1| truncated internalin A precursor [Listeria monocytogenes]
gi|194326155|emb|CAQ77236.1| internalin A [Listeria monocytogenes]
gi|294358379|gb|ADE73842.1| truncated InlA [Listeria monocytogenes]
gi|294358381|gb|ADE73843.1| truncated InlA [Listeria monocytogenes]
gi|294358383|gb|ADE73844.1| truncated InlA [Listeria monocytogenes]
gi|294358385|gb|ADE73845.1| truncated InlA [Listeria monocytogenes]
gi|298359890|gb|ADI77524.1| truncated internalin A [Listeria monocytogenes]
gi|298359938|gb|ADI77548.1| truncated internalin A [Listeria monocytogenes]
gi|298359960|gb|ADI77559.1| truncated internalin A [Listeria monocytogenes]
gi|298360012|gb|ADI77585.1| truncated internalin A [Listeria monocytogenes]
gi|371942072|gb|AEX60848.1| truncated internaline [Listeria monocytogenes]
gi|371942094|gb|AEX60859.1| truncated internaline [Listeria monocytogenes]
gi|371942120|gb|AEX60872.1| truncated internaline [Listeria monocytogenes]
gi|371942130|gb|AEX60877.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 384
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +N
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 327
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 328 QLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 387
Query: 240 LDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 388 LSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 286 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 345
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 346 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 405
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 406 RITQLGLNDQAWT 418
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 75 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 131
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 132 IADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 191
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 192 SFG-NQVTD 199
>gi|85679240|gb|ABC72036.1| InlA [Listeria monocytogenes]
Length = 794
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 165 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKLSDISV 223
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 224 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 283
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 284 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 343
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 344 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 374
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 206 TTLERLDISSNKLSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 265
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 266 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 325
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 326 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 385
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 386 WLSAGHNQISDLTPLANLTRITQLGLND 413
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 107 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 166
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 167 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKLSDISVLAK 226
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 227 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 286
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 287 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 345
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 346 YFNNISDISPVSS 358
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 146
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 147 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 206 TTLERLDISSNKLSDISVLAKLTNLESLIATNNQISDITPLGILTN 251
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 252 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 311
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 312 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 371
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 372 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 417
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 73 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 129
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 130 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 189
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 190 LSFG-NQVTD 198
>gi|441470006|emb|CCQ19761.1| Internalin-A [Listeria monocytogenes]
Length = 489
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 384
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +N
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 327
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 328 QLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 387
Query: 240 LDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 388 LSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 286 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 345
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 346 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 405
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 406 RITQLGLNDQAWT 418
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 75 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 131
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 132 IADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 191
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 192 SFG-NQVTD 199
>gi|223698700|gb|ACN19040.1| truncated internalin A [Listeria monocytogenes]
Length = 599
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|223698883|gb|ACN19162.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 40 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 99
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 100 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 159 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 218
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 219 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 274
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|371942108|gb|AEX60866.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 384
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +N
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 327
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 328 QLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 387
Query: 240 LDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 388 LSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 286 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 345
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 346 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 405
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 406 RITQLGLNDQAWT 418
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 75 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 131
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 132 IADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 191
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 192 SFG-NQVTD 199
>gi|223698697|gb|ACN19038.1| truncated internalin A [Listeria monocytogenes]
gi|223698841|gb|ACN19134.1| truncated internalin A [Listeria monocytogenes]
gi|223698877|gb|ACN19158.1| truncated internalin A [Listeria monocytogenes]
gi|223698922|gb|ACN19188.1| truncated internalin A [Listeria monocytogenes]
Length = 406
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 299
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 23 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 63 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 141 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 200
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 201 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 260
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 261 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 320
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 321 RITQLGLNDQAWT 333
>gi|149674|gb|AAA25289.1| internalin [Listeria monocytogenes]
gi|22347564|gb|AAM95927.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 110 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 168
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 169 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 228
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 229 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 288
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 289 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 319
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 69 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 128
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 129 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 188 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 247
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 248 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 303
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 210
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 211 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 270
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 271 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 330
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 331 WLSAGHNQISDLTPLANLTRITQLGLND 358
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 32 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 91
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 151
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 152 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 211
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 212 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 253
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 32 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 91
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 150
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 196
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 197 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 256
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 257 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 316
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 317 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 362
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 18 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 74
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 75 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 134
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 135 LSFG-NQVTD 143
>gi|29423725|gb|AAO73556.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 109 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKLSDISV 167
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 168 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 227
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 228 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 287
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 288 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 318
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 150 TTLERLDISSNKLSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 209
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 210 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 269
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 270 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 329
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 330 WLSAGHNQISDLTPLANLTRITQLGLND 357
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 51 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 110
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 111 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKLSDISVLAK 170
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 171 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 230
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 231 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 289
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 290 YFNNISDISPVSS 302
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 31 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 90
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 91 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 149
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 150 TTLERLDISSNKLSDISVLAKLTNLESLIATNNQISDITPLGILTN 195
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 196 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 255
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 256 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 315
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 316 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 361
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 17 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 73
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 74 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 133
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 134 LSFG-NQVTD 142
>gi|313485040|gb|ADR52996.1| InlA [Listeria monocytogenes]
Length = 491
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 384
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +N
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 327
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 328 QLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 387
Query: 240 LDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 388 LSAGHNQISDLTPLANLTRITQLGLND 414
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 286 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 345
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 346 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 405
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 406 RITQLGLNDQAWT 418
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 75 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 131
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 132 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 191
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 192 SFG-NQVTD 199
>gi|219821333|gb|ACL37800.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 132/237 (55%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLTNLTGLTLFNNQITDINPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDINPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ I+ L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDINPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLTNLTGLTLFNNQITDINPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 195 ILSLQCNRL--RTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQN 252
+ +LQ +RL ++I+ LE L NLTQ+ S N LT I L KL + + N+I+ I
Sbjct: 20 VTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITP 79
Query: 253 IAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+A+LT L + +NQ++D +N L+N L + L N ++
Sbjct: 80 LANLTNLTGLTLFNNQITD---INPLKNLTNLNRLELSSNTIS 119
>gi|371942144|gb|AEX60884.1| truncated internaline [Listeria monocytogenes]
Length = 491
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 384
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +N
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 327
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 328 QLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 387
Query: 240 LDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 388 LSAGHNQISDLTPLANLTRITQLGLND 414
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 286 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 345
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 346 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 405
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 406 RITQLGLNDQAWT 418
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 75 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 131
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 132 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 191
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 192 SFG-NQVTD 199
>gi|112959468|gb|ABI27261.1| internalin A [Listeria monocytogenes]
Length = 730
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 96 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 154
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 155 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 214
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 215 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 274
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 275 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 305
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 55 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 114
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 115 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 173
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 174 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 233
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 234 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 289
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 137 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 196
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 197 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 256
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 257 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 316
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 317 WLSAGHNQISDLTPLANLTRITQLGLND 344
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 18 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 77
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 78 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 137
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 138 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 197
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 198 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 239
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 18 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 77
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 78 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 136
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 137 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 182
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 4 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 60
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 61 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 120
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 121 LSFG-NQVTD 129
>gi|223698610|gb|ACN18980.1| internalin A [Listeria monocytogenes]
gi|223698616|gb|ACN18984.1| internalin A [Listeria monocytogenes]
gi|223698631|gb|ACN18994.1| internalin A [Listeria monocytogenes]
gi|223698637|gb|ACN18998.1| internalin A [Listeria monocytogenes]
gi|223698640|gb|ACN19000.1| internalin A [Listeria monocytogenes]
gi|223698649|gb|ACN19006.1| internalin A [Listeria monocytogenes]
gi|223698652|gb|ACN19008.1| internalin A [Listeria monocytogenes]
gi|223698661|gb|ACN19014.1| internalin A [Listeria monocytogenes]
gi|223698667|gb|ACN19018.1| internalin A [Listeria monocytogenes]
gi|223698676|gb|ACN19024.1| internalin A [Listeria monocytogenes]
gi|223698679|gb|ACN19026.1| internalin A [Listeria monocytogenes]
gi|223698685|gb|ACN19030.1| internalin A [Listeria monocytogenes]
gi|223698688|gb|ACN19032.1| internalin A [Listeria monocytogenes]
gi|223698709|gb|ACN19046.1| internalin A [Listeria monocytogenes]
gi|223698721|gb|ACN19054.1| internalin A [Listeria monocytogenes]
gi|223698724|gb|ACN19056.1| internalin A [Listeria monocytogenes]
gi|223698727|gb|ACN19058.1| internalin A [Listeria monocytogenes]
gi|223698730|gb|ACN19060.1| internalin A [Listeria monocytogenes]
gi|223698733|gb|ACN19062.1| internalin A [Listeria monocytogenes]
gi|223698742|gb|ACN19068.1| internalin A [Listeria monocytogenes]
gi|223698763|gb|ACN19082.1| internalin A [Listeria monocytogenes]
gi|223698790|gb|ACN19100.1| internalin A [Listeria monocytogenes]
gi|223698808|gb|ACN19112.1| internalin A [Listeria monocytogenes]
gi|223698811|gb|ACN19114.1| internalin A [Listeria monocytogenes]
gi|223698823|gb|ACN19122.1| internalin A [Listeria monocytogenes]
gi|223698853|gb|ACN19142.1| internalin A [Listeria monocytogenes]
gi|223698874|gb|ACN19156.1| internalin A [Listeria monocytogenes]
gi|223698889|gb|ACN19166.1| internalin A [Listeria monocytogenes]
gi|223698949|gb|ACN19206.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 40 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 99
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 100 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 159 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 218
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 219 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 274
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|219821273|gb|ACL37760.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 130/232 (56%), Gaps = 6/232 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L L NL+
Sbjct: 72 NQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQ 131
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS I L
Sbjct: 132 QLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLG 190
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L + N+IS
Sbjct: 191 ILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQIS 250
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 251 NISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + E +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRISELGLND 356
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDIVMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDIVMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDIVMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|112959446|gb|ABI27250.1| internalin A [Listeria monocytogenes]
gi|112959466|gb|ABI27260.1| internalin A [Listeria monocytogenes]
gi|112959470|gb|ABI27262.1| internalin A [Listeria monocytogenes]
gi|112959474|gb|ABI27264.1| internalin A [Listeria monocytogenes]
gi|112959476|gb|ABI27265.1| internalin A [Listeria monocytogenes]
gi|112959478|gb|ABI27266.1| internalin A [Listeria monocytogenes]
gi|112959484|gb|ABI27269.1| internalin A [Listeria monocytogenes]
gi|112959486|gb|ABI27270.1| internalin A [Listeria monocytogenes]
gi|112959492|gb|ABI27273.1| internalin A [Listeria monocytogenes]
gi|112959494|gb|ABI27274.1| internalin A [Listeria monocytogenes]
gi|112959504|gb|ABI27279.1| internalin A [Listeria monocytogenes]
gi|112959516|gb|ABI27285.1| internalin A [Listeria monocytogenes]
gi|112959532|gb|ABI27293.1| internalin A [Listeria monocytogenes]
gi|112959534|gb|ABI27294.1| internalin A [Listeria monocytogenes]
gi|112959540|gb|ABI27297.1| internalin A [Listeria monocytogenes]
gi|112959544|gb|ABI27299.1| internalin A [Listeria monocytogenes]
gi|112959550|gb|ABI27302.1| internalin A [Listeria monocytogenes]
gi|112959554|gb|ABI27304.1| internalin A [Listeria monocytogenes]
gi|112959558|gb|ABI27306.1| internalin A [Listeria monocytogenes]
gi|112959560|gb|ABI27307.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 103 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 161
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 162 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 221
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 222 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 281
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 282 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 312
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 62 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 121
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 122 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 181 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 240
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 241 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 296
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 203
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 204 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 263
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 264 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 323
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 324 WLSAGHNQISDLTPLANLTRITQLGLND 351
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 144
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 145 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 204
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 205 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 246
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 143
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 189
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 11 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 67
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 68 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 127
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 128 LSFG-NQVTD 136
>gi|150371726|dbj|BAF65678.1| internalin A [Listeria monocytogenes]
gi|194326151|emb|CAQ77234.1| internalin A [Listeria monocytogenes]
gi|298360180|gb|ADI77669.1| internalin A [Listeria monocytogenes]
gi|298360390|gb|ADI77774.1| internalin A [Listeria monocytogenes]
gi|298360416|gb|ADI77787.1| internalin A [Listeria monocytogenes]
gi|298360620|gb|ADI77889.1| internalin A [Listeria monocytogenes]
gi|298360656|gb|ADI77907.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|112959506|gb|ABI27280.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 103 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 161
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 162 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 221
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 222 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 281
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 282 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 312
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 62 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 121
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 122 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 181 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 240
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 241 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 296
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 203
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 204 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 263
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 264 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 323
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 324 WLSAGHNQISDLTPLANLTRITQLGLND 351
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 144
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 145 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 204
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 205 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 246
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 143
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 189
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 11 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 67
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 68 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 127
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 128 LSFG-NQVTD 136
>gi|298360020|gb|ADI77589.1| truncated internalin A [Listeria monocytogenes]
gi|298360528|gb|ADI77843.1| truncated internalin A [Listeria monocytogenes]
Length = 459
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 384
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +N
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 327
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 328 QLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 387
Query: 240 LDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 388 LSAGHNQISDLTPLANLTRITQLGLND 414
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 286 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 345
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 346 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 405
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 406 RITQLGLNDQAWT 418
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 75 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 131
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 132 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 191
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 192 SFG-NQVTD 199
>gi|112961616|gb|ABI28430.1| internalin A [Listeria monocytogenes]
gi|112961649|gb|ABI28452.1| internalin A [Listeria monocytogenes]
gi|112961652|gb|ABI28454.1| internalin A [Listeria monocytogenes]
gi|112961664|gb|ABI28462.1| internalin A [Listeria monocytogenes]
gi|112961691|gb|ABI28480.1| internalin A [Listeria monocytogenes]
gi|112961718|gb|ABI28498.1| internalin A [Listeria monocytogenes]
gi|112961727|gb|ABI28504.1| internalin A [Listeria monocytogenes]
gi|112961748|gb|ABI28518.1| internalin A [Listeria monocytogenes]
gi|112961751|gb|ABI28520.1| internalin A [Listeria monocytogenes]
gi|112961769|gb|ABI28532.1| internalin A [Listeria monocytogenes]
gi|112961775|gb|ABI28536.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 117 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 175
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 176 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 235
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 236 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 295
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 296 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 326
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 76 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 135
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 136 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 195 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 254
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 255 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 310
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 217
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 218 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 277
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 278 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 337
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 338 WLSAGHNQISDLTPLANLTRITQLGLND 365
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 158
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 159 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 218
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 219 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 260
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 157
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 203
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 25 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 81
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 82 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 141
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 142 LSFG-NQVTD 150
>gi|112961619|gb|ABI28432.1| internalin A [Listeria monocytogenes]
gi|112961637|gb|ABI28444.1| internalin A [Listeria monocytogenes]
gi|112961655|gb|ABI28456.1| internalin A [Listeria monocytogenes]
gi|112961658|gb|ABI28458.1| internalin A [Listeria monocytogenes]
gi|112961766|gb|ABI28530.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 117 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 175
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 176 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 235
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 236 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 295
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 296 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 326
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 76 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 135
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 136 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 195 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 254
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 255 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 310
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 217
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 218 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 277
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 278 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 337
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 338 WLSAGHNQISDLTPLANLTRITQLGLND 365
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 158
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 159 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 218
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 219 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 260
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 157
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 203
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 25 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 81
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 82 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 141
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 142 LSFG-NQVTD 150
>gi|219821324|gb|ACL37794.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 123/212 (58%), Gaps = 1/212 (0%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L L NL+
Sbjct: 72 NQITDISPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQ 131
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS I L
Sbjct: 132 QLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLG 190
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L+ LSL N+L+ I L +LTNLT L ++ N ++ + L KL L++ YN+IS
Sbjct: 191 ILTNLDELSLNGNQLKDIGTLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQIS 250
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
I IA LT L +++NQ+ D + ++ L+N
Sbjct: 251 NISPIAGLTALTSLELHENQLEDISPISNLKN 282
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL L + N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTSLDVANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I + LT LT L L EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELELGYNQISNISPIAGLTALTSLELHENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 ALYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 116/210 (55%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L + +N+IS + + L KL LELG N+I I + GLT L L L +
Sbjct: 209 GTLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQISNISPIAGLTALTSLELHE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLALYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQ 268
L A+N+IS + +A+LT + E +ND +
Sbjct: 329 WLSAAHNQISDLTPLANLTRISELGLNDQE 358
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 30 IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISPLANLTNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ G N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QITDISPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
+LD +T L+ LG I ID L L L ++ N+L I L+ LT L + ++ N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNN 72
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
+T I L + L L + N+I+ I + +LT L ++ N +SD + ++ L N +Q
Sbjct: 73 QITDISPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 284 LQ 285
L
Sbjct: 133 LS 134
>gi|112961622|gb|ABI28434.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 117 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 175
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 176 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 235
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 236 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 295
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 296 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 326
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 76 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 135
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 136 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 195 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 254
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 255 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 310
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 217
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 218 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 277
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 278 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 337
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 338 WLSAGHNQISDLTPLANLTRITQLGLND 365
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 158
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 159 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 218
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 219 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 260
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 157
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 203
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 25 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 81
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 82 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 141
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 142 LSFG-NQVTD 150
>gi|219821360|gb|ACL37818.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 195 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 254
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 255 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 314
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 315 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 360
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|219821318|gb|ACL37790.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 195 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 254
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 255 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 314
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 315 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 360
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|219821294|gb|ACL37774.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 195 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 254
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 255 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 314
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 315 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 360
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|29423714|gb|AAO73555.1| internalin A [Listeria monocytogenes]
Length = 743
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 109 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 167
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 168 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 227
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 228 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 287
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 288 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 318
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 68 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 127
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 128 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 186
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 187 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 246
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 247 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 302
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 150 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 209
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 210 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 269
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 270 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 329
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 330 WLSAGHNQISDLTPLANLTRITQLGLND 357
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 31 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 90
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 91 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 150
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 151 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 210
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 211 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 252
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 31 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 90
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 91 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 149
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 150 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 195
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 196 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 255
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 256 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 315
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 316 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 361
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 17 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 73
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 74 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 133
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 134 LSFG-NQVTD 142
>gi|71912408|gb|AAZ53236.1| InlA [Listeria monocytogenes]
Length = 800
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|298359932|gb|ADI77545.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|219821309|gb|ACL37784.1| internalin A [Listeria monocytogenes]
gi|219821393|gb|ACL37840.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|112959518|gb|ABI27286.1| internalin A [Listeria monocytogenes]
gi|112959520|gb|ABI27287.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 103 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 161
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 162 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 221
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 222 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 281
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 282 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 312
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 62 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 121
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 122 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 181 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 240
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 241 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 296
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 203
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 204 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 263
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 264 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 323
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 324 WLSAGHNQISDLTPLANLTRITQLGLND 351
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 144
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 145 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 204
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 205 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 246
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 143
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 189
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 11 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 67
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 68 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 127
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 128 LSFG-NQVTD 136
>gi|22347548|gb|AAM95919.1| internalin A precursor [Listeria monocytogenes]
gi|22347558|gb|AAM95924.1| internalin A precursor [Listeria monocytogenes]
gi|22347560|gb|AAM95925.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 110 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 168
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 169 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 228
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 229 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 288
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 289 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 319
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 69 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 128
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 129 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 188 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 247
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 248 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 303
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 210
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 211 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 270
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 271 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 330
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 331 WLSAGHNQISDLTPLANLTRITQLGLND 358
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 32 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 91
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 151
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 152 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 211
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 212 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 253
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 32 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 91
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 150
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 196
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 18 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 74
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 75 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 134
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 135 LSFG-NQVTD 143
>gi|22347562|gb|AAM95926.1| internalin A precursor [Listeria monocytogenes]
Length = 744
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 110 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 168
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 169 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 228
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 229 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 288
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 289 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 319
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 69 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 128
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 129 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 188 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 247
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 248 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 303
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 210
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 211 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 270
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 271 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 330
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 331 WLSAGHNQISDLTPLANLTRITQLGLND 358
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 32 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 91
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 151
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 152 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 211
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 212 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 253
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 32 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 91
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 150
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 196
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 18 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 74
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 75 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 134
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 135 LSFG-NQVTD 143
>gi|223698625|gb|ACN18990.1| internalin A [Listeria monocytogenes]
gi|223698736|gb|ACN19064.1| internalin A [Listeria monocytogenes]
gi|223698739|gb|ACN19066.1| internalin A [Listeria monocytogenes]
gi|223698847|gb|ACN19138.1| internalin A [Listeria monocytogenes]
gi|223698904|gb|ACN19176.1| internalin A [Listeria monocytogenes]
gi|223698955|gb|ACN19210.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 40 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 99
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 100 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 159 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 218
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 219 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 274
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|219821354|gb|ACL37814.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I + LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPIAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 50 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 109
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 110 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 169
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 170 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 229
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I IA LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 230 LAPLSGLTKLTELKLGANQISNISPIAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 288
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 289 YFNNISDISPVSS 301
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I + GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPIAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 94/189 (49%), Gaps = 22/189 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 168 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 227
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 228 SNLAPLSGLTKLTELKLGANQISNISPIAGLTALTNLELNENQLEDISPISNLKNLTYLT 287
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 288 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 347
Query: 214 NLTQLYLSE 222
+TQL L++
Sbjct: 348 RITQLGLND 356
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|219821264|gb|ACL37754.1| internalin A [Listeria monocytogenes]
gi|219821306|gb|ACL37782.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|219821255|gb|ACL37748.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 195 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 254
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 255 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 314
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 315 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 360
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|298360550|gb|ADI77854.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|112959452|gb|ABI27253.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 103 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 161
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 162 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 221
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 222 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 281
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 282 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 312
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 62 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 121
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 122 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 181 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 240
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 241 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 296
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 203
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 204 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 263
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 264 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 323
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 324 WLSAGHNQISDLTPLANLTRITQLGLND 351
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 144
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 145 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 204
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 205 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 246
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 143
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 189
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 11 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 67
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 68 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 127
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 128 LSFG-NQVTD 136
>gi|219821261|gb|ACL37752.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 195 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 254
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 255 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 314
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 315 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 360
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|112959438|gb|ABI27246.1| internalin A [Listeria monocytogenes]
gi|112959450|gb|ABI27252.1| internalin A [Listeria monocytogenes]
gi|112959456|gb|ABI27255.1| internalin A [Listeria monocytogenes]
gi|112959496|gb|ABI27275.1| internalin A [Listeria monocytogenes]
gi|112959498|gb|ABI27276.1| internalin A [Listeria monocytogenes]
gi|112959526|gb|ABI27290.1| internalin A [Listeria monocytogenes]
gi|112959528|gb|ABI27291.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 103 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 161
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 162 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 221
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 222 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 281
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 282 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 312
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 62 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 121
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 122 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 181 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 240
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 241 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 296
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 203
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 204 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 263
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 264 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 323
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 324 WLSAGHNQISDLTPLANLTRITQLGLND 351
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 144
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 145 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 204
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 205 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 246
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 143
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 189
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 11 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 67
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 68 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 127
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 128 LSFG-NQVTD 136
>gi|112959522|gb|ABI27288.1| truncated internalin A [Listeria monocytogenes]
Length = 538
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 123/220 (55%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 99 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 157
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 158 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 217
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 218 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 277
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 278 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 317
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 58 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 117
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 118 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 176
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 177 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 236
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 237 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 292
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 140 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 199
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 200 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 259
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 260 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 319
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 320 WLSAGHNQISDLTPLANLTRITQLGLND 347
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 21 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 80
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 81 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 140
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 141 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 200
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 201 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 242
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 21 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 80
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 81 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 139
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 140 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 185
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N+
Sbjct: 8 LDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQ 64
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 65 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQL 124
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 125 SFG-NQVTD 132
>gi|313485046|gb|ADR52998.1| InlA [Listeria monocytogenes]
Length = 774
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|298360200|gb|ADI77679.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|219821297|gb|ACL37776.1| internalin A [Listeria monocytogenes]
gi|219821303|gb|ACL37780.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|219821267|gb|ACL37756.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|386042770|ref|YP_005961575.1| internalin A [Listeria monocytogenes 10403S]
gi|404409675|ref|YP_006695263.1| internalin A [Listeria monocytogenes SLCC5850]
gi|403399436|sp|G2K3G6.1|INLA_LISM4 RecName: Full=Internalin-A; Flags: Precursor
gi|150371722|dbj|BAF65676.1| internalin A [Listeria monocytogenes]
gi|150371786|dbj|BAF65682.1| internalin A [Listeria monocytogenes]
gi|150371800|dbj|BAF65689.1| internalin A [Listeria monocytogenes]
gi|150371810|dbj|BAF65694.1| internalin A [Listeria monocytogenes]
gi|150371812|dbj|BAF65695.1| internalin A [Listeria monocytogenes]
gi|150371816|dbj|BAF65697.1| internalin A [Listeria monocytogenes]
gi|150371826|dbj|BAF65702.1| internalin A [Listeria monocytogenes]
gi|150371840|dbj|BAF65709.1| internalin A [Listeria monocytogenes]
gi|150371842|dbj|BAF65710.1| internalin A [Listeria monocytogenes]
gi|150371862|dbj|BAF65720.1| internalin A [Listeria monocytogenes]
gi|150371866|dbj|BAF65722.1| internalin A [Listeria monocytogenes]
gi|167861902|gb|ACA05650.1| InlA [Listeria monocytogenes]
gi|167861984|gb|ACA05691.1| InlA [Listeria monocytogenes]
gi|167862000|gb|ACA05699.1| InlA [Listeria monocytogenes]
gi|167862006|gb|ACA05702.1| InlA [Listeria monocytogenes]
gi|194239412|emb|CAQ76846.1| internalin A [Listeria monocytogenes]
gi|223006784|gb|ACM69349.1| internalin A [Listeria monocytogenes]
gi|298359776|gb|ADI77467.1| internalin A [Listeria monocytogenes]
gi|298359804|gb|ADI77481.1| internalin A [Listeria monocytogenes]
gi|298359874|gb|ADI77516.1| internalin A [Listeria monocytogenes]
gi|298360072|gb|ADI77615.1| internalin A [Listeria monocytogenes]
gi|298360106|gb|ADI77632.1| internalin A [Listeria monocytogenes]
gi|298360118|gb|ADI77638.1| internalin A [Listeria monocytogenes]
gi|298360218|gb|ADI77688.1| internalin A [Listeria monocytogenes]
gi|298360262|gb|ADI77710.1| internalin A [Listeria monocytogenes]
gi|298360280|gb|ADI77719.1| internalin A [Listeria monocytogenes]
gi|298360386|gb|ADI77772.1| internalin A [Listeria monocytogenes]
gi|298360468|gb|ADI77813.1| internalin A [Listeria monocytogenes]
gi|298360570|gb|ADI77864.1| internalin A [Listeria monocytogenes]
gi|298360722|gb|ADI77940.1| internalin A [Listeria monocytogenes]
gi|302034307|gb|ADK92307.1| internalin A [Listeria monocytogenes]
gi|302034309|gb|ADK92308.1| internalin A [Listeria monocytogenes]
gi|302034311|gb|ADK92309.1| internalin A [Listeria monocytogenes]
gi|302034313|gb|ADK92310.1| internalin A [Listeria monocytogenes]
gi|302034319|gb|ADK92313.1| internalin A [Listeria monocytogenes]
gi|302034321|gb|ADK92314.1| internalin A [Listeria monocytogenes]
gi|302034323|gb|ADK92315.1| internalin A [Listeria monocytogenes]
gi|302034325|gb|ADK92316.1| internalin A [Listeria monocytogenes]
gi|345536004|gb|AEO05444.1| internalin A [Listeria monocytogenes 10403S]
gi|404229501|emb|CBY50905.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC5850]
gi|443428772|gb|AGC92185.1| internalin A [Listeria monocytogenes]
gi|443428780|gb|AGC92189.1| internalin A [Listeria monocytogenes]
gi|443428864|gb|AGC92231.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|112961679|gb|ABI28472.1| internalin A [Listeria monocytogenes]
gi|112961682|gb|ABI28474.1| internalin A [Listeria monocytogenes]
gi|112961685|gb|ABI28476.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 117 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 175
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 176 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 235
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 236 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 295
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 296 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 326
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 76 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 135
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 136 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 195 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 254
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 255 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 310
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 217
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 218 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 277
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 278 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 337
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 338 WLSAGHNQISDLTPLANLTRITQLGLND 365
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 158
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 159 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 218
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 219 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 260
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 157
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 203
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 25 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 81
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 82 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 141
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 142 LSFG-NQVTD 150
>gi|167862030|gb|ACA05714.1| InlA [Listeria monocytogenes]
Length = 576
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 384
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +N
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 327
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 328 QLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 387
Query: 240 LDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 388 LSAGHNQISDLTPLANLTRITQLGLND 414
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNHITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNHITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 75 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 131
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 132 IADITPLANLTNLTGLTLFNNHITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 191
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 192 SFG-NQVTD 199
>gi|284800720|ref|YP_003412585.1| Internalin A [Listeria monocytogenes 08-5578]
gi|284993906|ref|YP_003415674.1| Internalin A [Listeria monocytogenes 08-5923]
gi|130774827|gb|ABO32426.1| InlA [Listeria monocytogenes]
gi|167862038|gb|ACA05718.1| InlA [Listeria monocytogenes]
gi|194326145|emb|CAQ77231.1| internalin A [Listeria monocytogenes]
gi|194326165|emb|CAQ77241.1| internalin A [Listeria monocytogenes]
gi|284056282|gb|ADB67223.1| Internalin A [Listeria monocytogenes 08-5578]
gi|284059373|gb|ADB70312.1| Internalin A [Listeria monocytogenes 08-5923]
gi|298359730|gb|ADI77444.1| internalin A [Listeria monocytogenes]
gi|298359786|gb|ADI77472.1| internalin A [Listeria monocytogenes]
gi|298359904|gb|ADI77531.1| internalin A [Listeria monocytogenes]
gi|298359978|gb|ADI77568.1| internalin A [Listeria monocytogenes]
gi|298360068|gb|ADI77613.1| internalin A [Listeria monocytogenes]
gi|298360228|gb|ADI77693.1| internalin A [Listeria monocytogenes]
gi|298360452|gb|ADI77805.1| internalin A [Listeria monocytogenes]
gi|298360556|gb|ADI77857.1| internalin A [Listeria monocytogenes]
gi|298360576|gb|ADI77867.1| internalin A [Listeria monocytogenes]
gi|298360600|gb|ADI77879.1| internalin A [Listeria monocytogenes]
gi|298360678|gb|ADI77918.1| internalin A [Listeria monocytogenes]
gi|443428872|gb|AGC92235.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|112961646|gb|ABI28450.1| internalin A [Listeria monocytogenes]
gi|112961721|gb|ABI28500.1| internalin A [Listeria monocytogenes]
gi|112961757|gb|ABI28524.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 117 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 175
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 176 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 235
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 236 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 295
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 296 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 326
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 76 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 135
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 136 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 195 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 254
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 255 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 310
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 217
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 218 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 277
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 278 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 337
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 338 WLSAGHNQISDLTPLANLTRITQLGLND 365
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 158
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 159 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 218
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 219 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 260
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 157
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 203
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 25 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 81
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 82 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 141
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 142 LSFG-NQVTD 150
>gi|219821258|gb|ACL37750.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 130/232 (56%), Gaps = 6/232 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L L NL+
Sbjct: 72 NQITDISPLANLTNLTGLTLFNNQITDIDALKNLTNLNRLELSSNTISDISALSGLTNLQ 131
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS I L
Sbjct: 132 QLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLG 190
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L + N+IS
Sbjct: 191 ILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQIS 250
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 251 NISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISPLANLTNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDALKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 30 IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISPLANLTNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDALKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ G N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QITDISPLANLTNLTGLTLFNNQITDIDALKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 195 ILSLQCNRL--RTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQN 252
+ +LQ +RL ++I+ LE L NLTQ+ N LT I L KL + + N+I+ I
Sbjct: 20 VTTLQADRLGIKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISP 79
Query: 253 IAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+A+LT L + +NQ++D ++ L+N L + L N ++
Sbjct: 80 LANLTNLTGLTLFNNQITD---IDALKNLTNLNRLELSSNTIS 119
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
+LD +T L+ LG I ID L L L ++ N+L I L+ LT L + ++ N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNN 72
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
+T I L + L L + N+I+ I + +LT L ++ N +SD + ++ L N +Q
Sbjct: 73 QITDISPLANLTNLTGLTLFNNQITDIDALKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 284 LQ 285
L
Sbjct: 133 LS 134
>gi|112961694|gb|ABI28482.1| internalin A [Listeria monocytogenes]
gi|112961706|gb|ABI28490.1| internalin A [Listeria monocytogenes]
gi|112961763|gb|ABI28528.1| internalin A [Listeria monocytogenes]
Length = 751
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 117 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 175
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 176 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 235
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 236 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 295
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 296 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 326
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 76 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 135
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 136 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 195 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 254
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 255 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 310
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 217
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 218 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 277
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 278 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 337
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 338 WLSAGHNQISDLTPLANLTRITQLGLND 365
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 158
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 159 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 218
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 219 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 260
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 157
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 203
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 25 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 81
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 82 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 141
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 142 LSFG-NQVTD 150
>gi|112959552|gb|ABI27303.1| internalin A [Listeria monocytogenes]
gi|112959556|gb|ABI27305.1| internalin A [Listeria monocytogenes]
Length = 737
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 103 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 161
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 162 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 221
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 222 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 281
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 282 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 312
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 62 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 121
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 122 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 181 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 240
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 241 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 296
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 203
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 204 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 263
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 264 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 323
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 324 WLSAGHNQISDLTPLANLTRITQLGLND 351
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 144
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 145 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 204
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 205 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 246
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 143
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 189
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 11 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 67
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 68 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 127
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 128 LSFG-NQVTD 136
>gi|112959440|gb|ABI27247.1| truncated internalin A [Listeria monocytogenes]
gi|112959442|gb|ABI27248.1| truncated internalin A [Listeria monocytogenes]
gi|112959448|gb|ABI27251.1| truncated internalin A [Listeria monocytogenes]
gi|112959454|gb|ABI27254.1| truncated internalin A [Listeria monocytogenes]
gi|112959458|gb|ABI27256.1| truncated internalin A [Listeria monocytogenes]
gi|112959460|gb|ABI27257.1| truncated internalin A [Listeria monocytogenes]
gi|112959462|gb|ABI27258.1| truncated internalin A [Listeria monocytogenes]
gi|112959472|gb|ABI27263.1| truncated internalin A [Listeria monocytogenes]
gi|112959480|gb|ABI27267.1| truncated internalin A [Listeria monocytogenes]
gi|112959482|gb|ABI27268.1| truncated internalin A [Listeria monocytogenes]
gi|112959488|gb|ABI27271.1| truncated internalin A [Listeria monocytogenes]
gi|112959514|gb|ABI27284.1| truncated internalin A [Listeria monocytogenes]
gi|112959538|gb|ABI27296.1| truncated internalin A [Listeria monocytogenes]
gi|112959542|gb|ABI27298.1| truncated internalin A [Listeria monocytogenes]
gi|112959548|gb|ABI27301.1| truncated internalin A [Listeria monocytogenes]
Length = 542
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 123/220 (55%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 103 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 161
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 162 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 221
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 222 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 281
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 282 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 321
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 62 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 121
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 122 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 180
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 181 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 240
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 241 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 296
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 203
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 204 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 263
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 264 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 323
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 324 WLSAGHNQISDLTPLANLTRITQLGLND 351
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 144
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 145 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 204
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 205 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 246
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 25 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 84
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 85 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 143
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 144 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 189
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N+
Sbjct: 12 LDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQ 68
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 69 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQL 128
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 129 SFG-NQVTD 136
>gi|22347544|gb|AAM95917.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 110 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 168
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 169 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 228
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 229 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 288
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 289 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 319
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 69 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 128
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 129 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 187
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 188 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 247
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 248 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 303
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 210
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 211 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 270
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 271 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 330
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 331 WLSAGHNQISDLTPLANLTRITQLGLND 358
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 32 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 91
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 151
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 152 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 211
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 212 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 253
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 32 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 91
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 150
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 196
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 18 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 74
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 75 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 134
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 135 LSFG-NQVTD 143
>gi|441473145|emb|CCQ22899.1| Internalin-A [Listeria monocytogenes N53-1]
Length = 455
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 384
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +N
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 327
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 328 QLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 387
Query: 240 LDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 388 LSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 286 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 345
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 346 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 405
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 406 RITQLGLNDQAWT 418
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 75 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 131
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ LT LQ+
Sbjct: 132 IADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 191
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 192 SFG-NQVTD 199
>gi|219821369|gb|ACL37824.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|405757422|ref|YP_006686698.1| internalin A protein InlA, N-terminal part, partial [Listeria
monocytogenes SLCC2479]
gi|145687805|gb|ABP88875.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687811|gb|ABP88878.1| truncated internalin A precursor [Listeria monocytogenes]
gi|145687813|gb|ABP88879.1| truncated internalin A precursor [Listeria monocytogenes]
gi|167861890|gb|ACA05644.1| InlA [Listeria monocytogenes]
gi|167861942|gb|ACA05670.1| InlA [Listeria monocytogenes]
gi|167861986|gb|ACA05692.1| InlA [Listeria monocytogenes]
gi|194326143|emb|CAQ77230.1| internalin A [Listeria monocytogenes]
gi|298359794|gb|ADI77476.1| truncated internalin A [Listeria monocytogenes]
gi|298359982|gb|ADI77570.1| truncated internalin A [Listeria monocytogenes]
gi|298360074|gb|ADI77616.1| truncated internalin A [Listeria monocytogenes]
gi|298360136|gb|ADI77647.1| truncated internalin A [Listeria monocytogenes]
gi|298360184|gb|ADI77671.1| truncated internalin A [Listeria monocytogenes]
gi|298360286|gb|ADI77722.1| truncated internalin A [Listeria monocytogenes]
gi|298360300|gb|ADI77729.1| truncated internalin A [Listeria monocytogenes]
gi|298360306|gb|ADI77732.1| truncated internalin A [Listeria monocytogenes]
gi|298360344|gb|ADI77751.1| truncated internalin A [Listeria monocytogenes]
gi|298360352|gb|ADI77755.1| truncated internalin A [Listeria monocytogenes]
gi|298360358|gb|ADI77758.1| truncated internalin A [Listeria monocytogenes]
gi|298360602|gb|ADI77880.1| truncated internalin A [Listeria monocytogenes]
gi|298360636|gb|ADI77897.1| truncated internalin A [Listeria monocytogenes]
gi|371942098|gb|AEX60861.1| truncated internaline [Listeria monocytogenes]
gi|371942122|gb|AEX60873.1| truncated internaline [Listeria monocytogenes]
gi|404235304|emb|CBY56706.1| similar to internalin A protein InlA, N-terminal part [Listeria
monocytogenes SLCC2479]
Length = 576
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 384
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +N
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 327
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 328 QLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 387
Query: 240 LDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 388 LSAGHNQISDLTPLANLTRITQLGLND 414
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N+
Sbjct: 75 LDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQ 131
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 132 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 191
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 192 SFG-NQVTD 199
>gi|130774815|gb|ABO32420.1| InlA [Listeria monocytogenes]
gi|194239404|emb|CAQ76842.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|219821330|gb|ACL37798.1| internalin A [Listeria monocytogenes]
gi|219821348|gb|ACL37810.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 115/208 (55%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L A+N+IS + +A+LT + + +ND
Sbjct: 329 WLSAAHNQISDLTPLANLTRITQLGLND 356
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 195 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 254
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 255 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 314
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 315 VSDVSSLANLTNINWLSAAHNQISDLTPLANLTRITQLGLNDQAWT 360
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|219821342|gb|ACL37806.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLTGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 132/237 (55%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I + LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLTGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLTGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|112961640|gb|ABI28446.1| truncated internalin A [Listeria monocytogenes]
gi|112961643|gb|ABI28448.1| truncated internalin A [Listeria monocytogenes]
gi|112961661|gb|ABI28460.1| truncated internalin A [Listeria monocytogenes]
Length = 556
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 123/220 (55%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 117 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 175
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 176 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 235
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 236 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 295
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 296 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 335
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 76 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 135
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 136 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 194
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 195 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 254
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 255 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 310
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 217
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 218 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 277
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 278 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 337
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 338 WLSAGHNQISDLTPLANLTRITQLGLND 365
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 39 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 98
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 99 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 157
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 158 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 203
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 25 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 81
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 82 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 141
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 142 LSFG-NQVTD 150
>gi|223698871|gb|ACN19154.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 40 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 99
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 100 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 158
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 159 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 218
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 219 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 274
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQLGLND 329
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 333
>gi|85679218|gb|ABC72025.1| InlA [Listeria monocytogenes]
gi|85679232|gb|ABC72032.1| InlA [Listeria monocytogenes]
Length = 794
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 165 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 223
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 224 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 283
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 284 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 343
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 344 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 374
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 124 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 183
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 184 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 242
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 243 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 302
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 303 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 358
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 265
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 266 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 325
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 326 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 385
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 386 WLSAGHNQISDLTPLANLTRITQLGLND 413
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 146
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 147 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 206
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 207 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 266
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 267 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 308
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 146
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 147 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 251
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 73 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 129
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 130 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 189
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 190 LSFG-NQVTD 198
>gi|22347572|gb|AAM95931.1| internalin A precursor [Listeria monocytogenes]
Length = 741
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 110 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 168
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 169 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 228
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 229 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 288
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 289 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 319
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 130/232 (56%), Gaps = 6/232 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L L NL+
Sbjct: 74 NQITDISPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQ 133
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS I L
Sbjct: 134 QLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLG 192
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L + N+IS
Sbjct: 193 ILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQIS 252
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 253 NISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 303
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 210
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 211 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 270
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 271 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 330
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 331 WLSAGHNQISDLTPLANLTRITQLGLND 358
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 32 IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISPLANLTNLTGL 91
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 151
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 152 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 211
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 212 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 253
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 32 IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISPLANLTNLTGL 91
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 92 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 150
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 151 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 196
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 197 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 256
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 257 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 316
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 317 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 362
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ G N+++ I L LTKL + + N
Sbjct: 18 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNN 74
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 75 QITDISPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 134
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 135 LSFG-NQVTD 143
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
+LD +T L+ LG I ID L L L ++ N+L I L+ LT L + ++ N
Sbjct: 18 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNN 74
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
+T I L + L L + N+I+ I + +LT L ++ N +SD + ++ L N +Q
Sbjct: 75 QITDISPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 134
Query: 284 LQ 285
L
Sbjct: 135 LS 136
>gi|294358397|gb|ADE73851.1| InlA [Listeria monocytogenes]
Length = 800
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 113/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+I + +A+LT + + +ND
Sbjct: 387 WLSAGHNQIRDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|219821396|gb|ACL37842.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|112961778|gb|ABI28538.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 62 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 120
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 121 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 180
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 181 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 240
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 241 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 271
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 21 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 80
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 81 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 139
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 140 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 199
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 200 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 255
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 103 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 162
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 163 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 222
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 223 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 282
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 283 WLSAGHNQISDLTPLANLTRITQLGLND 310
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 90 DNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKL 149
+NQLT I L L L + ++ N+I +I L +L NL L L +N+I+ I+ + +L L
Sbjct: 3 NNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNL 62
Query: 150 KVLELGDNKIRIIENLDGLTNLEELYLG---------------------KNKISRIDNLA 188
LEL N I I L GLTNL++L G NK+S I LA
Sbjct: 63 NRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLA 122
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L L N++ I L LTNL +L L+ N L I L S L LD+A N+IS
Sbjct: 123 KLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQIS 182
Query: 249 IIQNIAHLTELQEFWINDNQVSD 271
+ ++ LT+L E + NQ+S+
Sbjct: 183 NLAPLSGLTKLTELKLGANQISN 205
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 89/171 (52%), Gaps = 1/171 (0%)
Query: 110 LSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLT 169
S N++ +I L L L + + +N+I+ I + +L L L L +N+I I+ L LT
Sbjct: 1 FSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLT 60
Query: 170 NLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NL L L N IS I L+ LT L LS N++ ++ L LT L +L +S N ++ I
Sbjct: 61 NLNRLELSSNTISDISALSGLTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDIS 119
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
L LE+L N+IS I + LT L E +N NQ+ D T+ L N
Sbjct: 120 VLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTN 170
>gi|294358389|gb|ADE73847.1| InlA [Listeria monocytogenes]
Length = 800
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|443428800|gb|AGC92199.1| truncated internalin A [Listeria monocytogenes]
gi|443428802|gb|AGC92200.1| truncated internalin A [Listeria monocytogenes]
gi|443428806|gb|AGC92202.1| truncated internalin A [Listeria monocytogenes]
gi|443428824|gb|AGC92211.1| truncated internalin A [Listeria monocytogenes]
gi|443428830|gb|AGC92214.1| truncated internalin A [Listeria monocytogenes]
gi|443428832|gb|AGC92215.1| truncated internalin A [Listeria monocytogenes]
gi|443428834|gb|AGC92216.1| truncated internalin A [Listeria monocytogenes]
Length = 797
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 115/210 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQ 268
L +N+IS + +A+LT + + +ND +
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLNDQE 416
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|219821387|gb|ACL37836.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 130/232 (56%), Gaps = 6/232 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L L NL+
Sbjct: 72 NQITDISPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQ 131
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS I L
Sbjct: 132 QLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLG 190
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L + N+IS
Sbjct: 191 ILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQIS 250
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 251 NISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISPLANLTNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 30 IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISPLANLTNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 195 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 254
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 255 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 314
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 315 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 360
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ G N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QITDISPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
+LD +T L+ LG I ID L L L ++ N+L I L+ LT L + ++ N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNN 72
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
+T I L + L L + N+I+ I + +LT L ++ N +SD + ++ L N +Q
Sbjct: 73 QITDISPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 284 LQ 285
L
Sbjct: 133 LS 134
>gi|130774813|gb|ABO32419.1| InlA [Listeria monocytogenes]
Length = 800
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|112961784|gb|ABI28542.1| internalin A [Listeria monocytogenes]
gi|112961796|gb|ABI28550.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 62 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 120
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 121 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 180
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 181 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 240
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 241 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 271
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 21 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 80
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 81 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 139
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 140 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 199
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 200 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 255
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 103 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 162
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 163 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 222
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 223 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 282
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 283 WLSAGHNQISDLTPLANLTRITQLGLND 310
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 90 DNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKL 149
+NQLT I L L L + ++ N+I +I L +L NL L L +N+I+ I+ + +L L
Sbjct: 3 NNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNL 62
Query: 150 KVLELGDNKIRIIENLDGLTNLEELYLG---------------------KNKISRIDNLA 188
LEL N I I L GLTNL++L G NK+S I LA
Sbjct: 63 NRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLA 122
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L L N++ I L LTNL +L L+ N L I L S L LD+A N+IS
Sbjct: 123 KLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQIS 182
Query: 249 IIQNIAHLTELQEFWINDNQVSD 271
+ ++ LT+L E + NQ+S+
Sbjct: 183 NLAPLSGLTKLTELKLGANQISN 205
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 89/171 (52%), Gaps = 1/171 (0%)
Query: 110 LSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLT 169
S N++ +I L L L + + +N+I+ I + +L L L L +N+I I+ L LT
Sbjct: 1 FSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLT 60
Query: 170 NLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NL L L N IS I L+ LT L LS N++ ++ L LT L +L +S N ++ I
Sbjct: 61 NLNRLELSSNTISDISALSGLTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDIS 119
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
L LE+L N+IS I + LT L E +N NQ+ D T+ L N
Sbjct: 120 VLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTN 170
>gi|112961787|gb|ABI28544.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 62 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 120
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 121 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 180
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 181 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 240
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 241 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 271
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 21 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 80
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 81 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 139
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 140 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 199
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 200 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 255
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 103 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 162
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 163 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 222
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 223 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 282
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 283 WLSAGHNQISDLTPLANLTRITQLGLND 310
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 90 DNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKL 149
+NQLT I L L L + ++ N+I +I L +L NL L L +N+I+ I+ + +L L
Sbjct: 3 NNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNL 62
Query: 150 KVLELGDNKIRIIENLDGLTNLEELYLG---------------------KNKISRIDNLA 188
LEL N I I L GLTNL++L G NK+S I LA
Sbjct: 63 NRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLA 122
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L L N++ I L LTNL +L L+ N L I L S L LD+A N+IS
Sbjct: 123 KLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQIS 182
Query: 249 IIQNIAHLTELQEFWINDNQVSD 271
+ ++ LT+L E + NQ+S+
Sbjct: 183 NLAPLSGLTKLTELKLGANQISN 205
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 89/171 (52%), Gaps = 1/171 (0%)
Query: 110 LSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLT 169
S N++ +I L L L + + +N+I+ I + +L L L L +N+I I+ L LT
Sbjct: 1 FSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLT 60
Query: 170 NLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NL L L N IS I L+ LT L LS N++ ++ L LT L +L +S N ++ I
Sbjct: 61 NLNRLELSSNTISDISALSGLTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDIS 119
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
L LE+L N+IS I + LT L E +N NQ+ D T+ L N
Sbjct: 120 VLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTN 170
>gi|112959464|gb|ABI27259.1| internalin A [Listeria monocytogenes]
Length = 698
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 64 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 122
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 123 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 182
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 183 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 242
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 243 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 273
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 23 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 82
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 83 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 141
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 142 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 201
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 202 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 257
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 105 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 164
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 165 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 224
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 225 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 284
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 285 WLSAGHNQISDLTPLANLTRITQLGLND 312
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 86 LELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDH 145
+ +NQLT I L L L + ++ N+I +I L +L NL L L +N+I+ I+ + +
Sbjct: 1 INFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKN 60
Query: 146 LKKLKVLELGDNKIRIIENLDGLTNLEELYLG---------------------KNKISRI 184
L L LEL N I I L GLTNL++L G NK+S I
Sbjct: 61 LTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI 120
Query: 185 DNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAY 244
LA LT L L N++ I L LTNL +L L+ N L I L S L LD+A
Sbjct: 121 SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLAN 180
Query: 245 NKISIIQNIAHLTELQEFWINDNQVSD 271
N+IS + ++ LT+L E + NQ+S+
Sbjct: 181 NQISNLAPLSGLTKLTELKLGANQISN 207
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 91/173 (52%), Gaps = 1/173 (0%)
Query: 108 LDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG 167
++ S N++ +I L L L + + +N+I+ I + +L L L L +N+I I+ L
Sbjct: 1 INFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKN 60
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNL L L N IS I L+ LT L LS N++ ++ L LT L +L +S N ++
Sbjct: 61 LTNLNRLELSSNTISDISALSGLTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSD 119
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
I L LE+L N+IS I + LT L E +N NQ+ D T+ L N
Sbjct: 120 ISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTN 172
>gi|112961781|gb|ABI28540.1| internalin A [Listeria monocytogenes]
Length = 696
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 62 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 120
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 121 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 180
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 181 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 240
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 241 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 271
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 21 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 80
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 81 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 139
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 140 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 199
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 200 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 255
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 103 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 162
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 163 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 222
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 223 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 282
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 283 WLSAGHNQISDLTPLANLTRITQLGLND 310
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 103/203 (50%), Gaps = 21/203 (10%)
Query: 90 DNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKL 149
+NQLT I L L L + ++ N+I +I L +L NL L L +N+I+ I+ + +L L
Sbjct: 3 NNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNL 62
Query: 150 KVLELGDNKIRIIENLDGLTNLEELYLG---------------------KNKISRIDNLA 188
LEL N I I L GLTNL++L G NK+S I LA
Sbjct: 63 NRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLA 122
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L L N++ I L LTNL +L L+ N L I L S L LD+A N+IS
Sbjct: 123 KLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQIS 182
Query: 249 IIQNIAHLTELQEFWINDNQVSD 271
+ ++ LT+L E + NQ+S+
Sbjct: 183 NLAPLSGLTKLTELKLGANQISN 205
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 89/171 (52%), Gaps = 1/171 (0%)
Query: 110 LSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLT 169
S N++ +I L L L + + +N+I+ I + +L L L L +N+I I+ L LT
Sbjct: 1 FSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLT 60
Query: 170 NLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NL L L N IS I L+ LT L LS N++ ++ L LT L +L +S N ++ I
Sbjct: 61 NLNRLELSSNTISDISALSGLTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDIS 119
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
L LE+L N+IS I + LT L E +N NQ+ D T+ L N
Sbjct: 120 VLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTN 170
>gi|404406915|ref|YP_006689630.1| internalin A [Listeria monocytogenes SLCC2376]
gi|130774829|gb|ABO32427.1| InlA [Listeria monocytogenes]
gi|167861972|gb|ACA05685.1| InlA [Listeria monocytogenes]
gi|194326147|emb|CAQ77232.1| internalin A [Listeria monocytogenes]
gi|404241064|emb|CBY62464.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 800
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|85679224|gb|ABC72028.1| InlA [Listeria monocytogenes]
Length = 794
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 165 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 223
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 224 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 283
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 284 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 343
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 344 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 374
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 124 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 183
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 184 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 242
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 243 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 302
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 303 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 358
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 265
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 266 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 325
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 326 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 385
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 386 WLSAGHNQISDLTPLANLTRITQLGLND 413
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 146
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 147 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 206
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 207 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 266
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 267 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 308
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 146
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 147 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 251
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 73 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 129
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 130 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 189
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 190 LSFG-NQVTD 198
>gi|371942132|gb|AEX60878.1| internaline [Listeria monocytogenes]
Length = 790
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 113/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGDNQISDLTPLANLTRITQLGLND 414
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|371942070|gb|AEX60847.1| internaline [Listeria monocytogenes]
Length = 789
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|371942140|gb|AEX60882.1| internaline [Listeria monocytogenes]
Length = 790
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|371942068|gb|AEX60846.1| internaline [Listeria monocytogenes]
gi|371942088|gb|AEX60856.1| internaline [Listeria monocytogenes]
gi|371942106|gb|AEX60865.1| internaline [Listeria monocytogenes]
gi|371942134|gb|AEX60879.1| internaline [Listeria monocytogenes]
Length = 790
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|167862012|gb|ACA05705.1| InlA [Listeria monocytogenes]
Length = 797
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|150371888|dbj|BAF65733.1| internalin A [Listeria monocytogenes]
gi|150371890|dbj|BAF65734.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|219821291|gb|ACL37772.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + N++T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTSLQQLS-FGNKVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 50 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 109
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 110 RLELSSNTISDISALSGLTSLQQLSFGNKVTDLKPLANLTTLERLDISSNKVSDISVLAK 169
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 170 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 229
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 230 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 288
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 289 YFNNISDISPVSS 301
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNKVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NKVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 195 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 254
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 255 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 314
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 315 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 360
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 132
Query: 262 FWINDNQVSD 271
N+V+D
Sbjct: 133 LSFG-NKVTD 141
>gi|85679238|gb|ABC72035.1| InlA [Listeria monocytogenes]
Length = 791
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 165 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 223
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 224 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 283
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 284 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 343
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 344 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 374
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 130/232 (56%), Gaps = 6/232 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L L NL+
Sbjct: 129 NQITDISPLANLTNLTGLTLFNNQITDIDALKNLTNLNRLELSSNTISDISALSGLTNLQ 188
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS I L
Sbjct: 189 QLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLG 247
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L + N+IS
Sbjct: 248 ILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQIS 307
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 308 NISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 358
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 265
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 266 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 325
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 326 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 385
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 386 WLSAGHNQISDLTPLANLTRITQLGLND 413
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISPLANLTNLTGL 146
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 147 TLFNNQITDIDALKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 206
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 207 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 266
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 267 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 308
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 87 IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISPLANLTNLTGL 146
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 147 TLFNNQITDIDALKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 251
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ G N+++ I L LTKL + + N
Sbjct: 73 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNN 129
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 130 QITDISPLANLTNLTGLTLFNNQITDIDALKNLTNLNRLELSSNTISDISALSGLTNLQQ 189
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 190 LSFG-NQVTD 198
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 195 ILSLQCNRL--RTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQN 252
+ +LQ +RL ++I+ LE L NLTQ+ N LT I L KL + + N+I+ I
Sbjct: 77 VTTLQADRLGIKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISP 136
Query: 253 IAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+A+LT L + +NQ++D ++ L+N L + L N ++
Sbjct: 137 LANLTNLTGLTLFNNQITD---IDALKNLTNLNRLELSSNTIS 176
>gi|85679228|gb|ABC72030.1| InlA [Listeria monocytogenes]
Length = 794
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 165 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 223
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 224 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 283
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 284 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 343
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 344 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 374
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 124 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 183
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 184 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 242
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 243 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 302
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 303 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 358
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 265
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 266 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 325
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 326 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 385
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 386 WLSAGHNQISDLTPLANLTRITQLGLND 413
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 146
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 147 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 206
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 207 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 266
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 267 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 308
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 146
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 147 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 251
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 73 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 129
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 130 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 189
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 190 LSFG-NQVTD 198
>gi|371942084|gb|AEX60854.1| internaline [Listeria monocytogenes]
Length = 790
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|298359924|gb|ADI77541.1| internalin A [Listeria monocytogenes]
gi|298359926|gb|ADI77542.1| internalin A [Listeria monocytogenes]
gi|298360172|gb|ADI77665.1| internalin A [Listeria monocytogenes]
gi|298360388|gb|ADI77773.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|298359896|gb|ADI77527.1| internalin A [Listeria monocytogenes]
Length = 797
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|371942138|gb|AEX60881.1| internaline [Listeria monocytogenes]
Length = 789
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|371942090|gb|AEX60857.1| internaline [Listeria monocytogenes]
Length = 790
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|371942142|gb|AEX60883.1| internaline [Listeria monocytogenes]
Length = 790
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|371942074|gb|AEX60849.1| internaline [Listeria monocytogenes]
gi|371942102|gb|AEX60863.1| internaline [Listeria monocytogenes]
gi|371942114|gb|AEX60869.1| internaline [Listeria monocytogenes]
gi|371942124|gb|AEX60874.1| internaline [Listeria monocytogenes]
Length = 790
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|167862040|gb|ACA05719.1| InlA [Listeria monocytogenes]
gi|194326153|emb|CAQ77235.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|298360122|gb|ADI77640.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|219821300|gb|ACL37778.1| internalin A [Listeria monocytogenes]
gi|219821378|gb|ACL37830.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 30 IKSIDGLKYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 251
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLKYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|130774759|gb|ABO32394.1| InlA [Listeria monocytogenes]
gi|298360132|gb|ADI77645.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|371942076|gb|AEX60850.1| internaline [Listeria monocytogenes]
gi|371942078|gb|AEX60851.1| internaline [Listeria monocytogenes]
gi|371942082|gb|AEX60853.1| internaline [Listeria monocytogenes]
Length = 789
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|322952085|gb|ADX21042.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|254854324|ref|ZP_05243672.1| internalin A [Listeria monocytogenes FSL R2-503]
gi|300766414|ref|ZP_07076370.1| internalin A precursor [Listeria monocytogenes FSL N1-017]
gi|404279991|ref|YP_006680889.1| internalin A [Listeria monocytogenes SLCC2755]
gi|404285805|ref|YP_006692391.1| internalin A [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|405754532|ref|YP_006677996.1| internalin A [Listeria monocytogenes SLCC2540]
gi|130774761|gb|ABO32395.1| InlA [Listeria monocytogenes]
gi|130774765|gb|ABO32397.1| InlA [Listeria monocytogenes]
gi|130774775|gb|ABO32402.1| InlA [Listeria monocytogenes]
gi|150371872|dbj|BAF65725.1| internalin A [Listeria monocytogenes]
gi|150371878|dbj|BAF65728.1| internalin A [Listeria monocytogenes]
gi|150371880|dbj|BAF65729.1| internalin A [Listeria monocytogenes]
gi|150371882|dbj|BAF65730.1| internalin A [Listeria monocytogenes]
gi|150371884|dbj|BAF65731.1| internalin A [Listeria monocytogenes]
gi|150371886|dbj|BAF65732.1| internalin A [Listeria monocytogenes]
gi|167861936|gb|ACA05667.1| InlA [Listeria monocytogenes]
gi|167861950|gb|ACA05674.1| InlA [Listeria monocytogenes]
gi|167861974|gb|ACA05686.1| InlA [Listeria monocytogenes]
gi|167861990|gb|ACA05694.1| InlA [Listeria monocytogenes]
gi|194239386|emb|CAQ76833.1| internalin A [Listeria monocytogenes]
gi|194239390|emb|CAQ76835.1| internalin A [Listeria monocytogenes]
gi|194239398|emb|CAQ76839.1| internalin A [Listeria monocytogenes]
gi|194326159|emb|CAQ77238.1| internalin A [Listeria monocytogenes]
gi|223006782|gb|ACM69348.1| internalin A [Listeria monocytogenes]
gi|258607720|gb|EEW20328.1| internalin A [Listeria monocytogenes FSL R2-503]
gi|290350822|dbj|BAI78332.1| internalin A [Listeria monocytogenes]
gi|290350824|dbj|BAI78333.1| internalin A [Listeria monocytogenes]
gi|298359734|gb|ADI77446.1| internalin A [Listeria monocytogenes]
gi|298359740|gb|ADI77449.1| internalin A [Listeria monocytogenes]
gi|298359774|gb|ADI77466.1| internalin A [Listeria monocytogenes]
gi|298359822|gb|ADI77490.1| internalin A [Listeria monocytogenes]
gi|298359826|gb|ADI77492.1| internalin A [Listeria monocytogenes]
gi|298359830|gb|ADI77494.1| internalin A [Listeria monocytogenes]
gi|298359834|gb|ADI77496.1| internalin A [Listeria monocytogenes]
gi|298359836|gb|ADI77497.1| internalin A [Listeria monocytogenes]
gi|298359846|gb|ADI77502.1| internalin A [Listeria monocytogenes]
gi|298359848|gb|ADI77503.1| internalin A [Listeria monocytogenes]
gi|298359854|gb|ADI77506.1| internalin A [Listeria monocytogenes]
gi|298359856|gb|ADI77507.1| internalin A [Listeria monocytogenes]
gi|298359868|gb|ADI77513.1| internalin A [Listeria monocytogenes]
gi|298359870|gb|ADI77514.1| internalin A [Listeria monocytogenes]
gi|298359888|gb|ADI77523.1| internalin A [Listeria monocytogenes]
gi|298359920|gb|ADI77539.1| internalin A [Listeria monocytogenes]
gi|298359954|gb|ADI77556.1| internalin A [Listeria monocytogenes]
gi|298359968|gb|ADI77563.1| internalin A [Listeria monocytogenes]
gi|298359972|gb|ADI77565.1| internalin A [Listeria monocytogenes]
gi|298359984|gb|ADI77571.1| internalin A [Listeria monocytogenes]
gi|298359998|gb|ADI77578.1| internalin A [Listeria monocytogenes]
gi|298360002|gb|ADI77580.1| internalin A [Listeria monocytogenes]
gi|298360006|gb|ADI77582.1| internalin A [Listeria monocytogenes]
gi|298360040|gb|ADI77599.1| internalin A [Listeria monocytogenes]
gi|298360042|gb|ADI77600.1| internalin A [Listeria monocytogenes]
gi|298360044|gb|ADI77601.1| internalin A [Listeria monocytogenes]
gi|298360050|gb|ADI77604.1| internalin A [Listeria monocytogenes]
gi|298360080|gb|ADI77619.1| internalin A [Listeria monocytogenes]
gi|298360090|gb|ADI77624.1| internalin A [Listeria monocytogenes]
gi|298360100|gb|ADI77629.1| internalin A [Listeria monocytogenes]
gi|298360126|gb|ADI77642.1| internalin A [Listeria monocytogenes]
gi|298360150|gb|ADI77654.1| internalin A [Listeria monocytogenes]
gi|298360156|gb|ADI77657.1| internalin A [Listeria monocytogenes]
gi|298360166|gb|ADI77662.1| internalin A [Listeria monocytogenes]
gi|298360188|gb|ADI77673.1| internalin A [Listeria monocytogenes]
gi|298360190|gb|ADI77674.1| internalin A [Listeria monocytogenes]
gi|298360194|gb|ADI77676.1| internalin A [Listeria monocytogenes]
gi|298360220|gb|ADI77689.1| internalin A [Listeria monocytogenes]
gi|298360222|gb|ADI77690.1| internalin A [Listeria monocytogenes]
gi|298360238|gb|ADI77698.1| internalin A [Listeria monocytogenes]
gi|298360246|gb|ADI77702.1| internalin A [Listeria monocytogenes]
gi|298360260|gb|ADI77709.1| internalin A [Listeria monocytogenes]
gi|298360264|gb|ADI77711.1| internalin A [Listeria monocytogenes]
gi|298360266|gb|ADI77712.1| internalin A [Listeria monocytogenes]
gi|298360294|gb|ADI77726.1| internalin A [Listeria monocytogenes]
gi|298360298|gb|ADI77728.1| internalin A [Listeria monocytogenes]
gi|298360312|gb|ADI77735.1| internalin A [Listeria monocytogenes]
gi|298360318|gb|ADI77738.1| internalin A [Listeria monocytogenes]
gi|298360356|gb|ADI77757.1| internalin A [Listeria monocytogenes]
gi|298360368|gb|ADI77763.1| internalin A [Listeria monocytogenes]
gi|298360396|gb|ADI77777.1| internalin A [Listeria monocytogenes]
gi|298360398|gb|ADI77778.1| internalin A [Listeria monocytogenes]
gi|298360400|gb|ADI77779.1| internalin A [Listeria monocytogenes]
gi|298360428|gb|ADI77793.1| internalin A [Listeria monocytogenes]
gi|298360434|gb|ADI77796.1| internalin A [Listeria monocytogenes]
gi|298360448|gb|ADI77803.1| internalin A [Listeria monocytogenes]
gi|298360462|gb|ADI77810.1| internalin A [Listeria monocytogenes]
gi|298360498|gb|ADI77828.1| internalin A [Listeria monocytogenes]
gi|298360502|gb|ADI77830.1| internalin A [Listeria monocytogenes]
gi|298360510|gb|ADI77834.1| internalin A [Listeria monocytogenes]
gi|298360514|gb|ADI77836.1| internalin A [Listeria monocytogenes]
gi|298360558|gb|ADI77858.1| internalin A [Listeria monocytogenes]
gi|298360560|gb|ADI77859.1| internalin A [Listeria monocytogenes]
gi|298360566|gb|ADI77862.1| internalin A [Listeria monocytogenes]
gi|298360586|gb|ADI77872.1| internalin A [Listeria monocytogenes]
gi|298360614|gb|ADI77886.1| internalin A [Listeria monocytogenes]
gi|298360630|gb|ADI77894.1| internalin A [Listeria monocytogenes]
gi|298360638|gb|ADI77898.1| internalin A [Listeria monocytogenes]
gi|298360652|gb|ADI77905.1| internalin A [Listeria monocytogenes]
gi|298360680|gb|ADI77919.1| internalin A [Listeria monocytogenes]
gi|298360682|gb|ADI77920.1| internalin A [Listeria monocytogenes]
gi|298360694|gb|ADI77926.1| internalin A [Listeria monocytogenes]
gi|298360704|gb|ADI77931.1| internalin A [Listeria monocytogenes]
gi|298360706|gb|ADI77932.1| internalin A [Listeria monocytogenes]
gi|300512880|gb|EFK39971.1| internalin A precursor [Listeria monocytogenes FSL N1-017]
gi|302034315|gb|ADK92311.1| internalin A [Listeria monocytogenes]
gi|302034317|gb|ADK92312.1| internalin A [Listeria monocytogenes]
gi|404223732|emb|CBY75094.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2540]
gi|404226626|emb|CBY48031.1| internalin A (LPXTG motif) [Listeria monocytogenes SLCC2755]
gi|404244734|emb|CBY02959.1| internalin A (LPXTG motif) [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 800
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|298360648|gb|ADI77903.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|313485077|gb|ADR53009.1| InlA [Listeria monocytogenes]
Length = 800
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|298360700|gb|ADI77929.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|298359892|gb|ADI77525.1| internalin A [Listeria monocytogenes]
gi|298360422|gb|ADI77790.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|254825753|ref|ZP_05230754.1| internalin A [Listeria monocytogenes FSL J1-194]
gi|255521302|ref|ZP_05388539.1| internalin A [Listeria monocytogenes FSL J1-175]
gi|130774771|gb|ABO32400.1| InlA [Listeria monocytogenes]
gi|130774777|gb|ABO32403.1| InlA [Listeria monocytogenes]
gi|130774779|gb|ABO32404.1| InlA [Listeria monocytogenes]
gi|150371874|dbj|BAF65726.1| internalin A [Listeria monocytogenes]
gi|150371876|dbj|BAF65727.1| internalin A [Listeria monocytogenes]
gi|223006790|gb|ACM69352.1| internalin A [Listeria monocytogenes]
gi|290350838|dbj|BAI78340.1| internalin A [Listeria monocytogenes]
gi|293594997|gb|EFG02758.1| internalin A [Listeria monocytogenes FSL J1-194]
gi|298359742|gb|ADI77450.1| internalin A [Listeria monocytogenes]
gi|298359744|gb|ADI77451.1| internalin A [Listeria monocytogenes]
gi|298359756|gb|ADI77457.1| internalin A [Listeria monocytogenes]
gi|298359790|gb|ADI77474.1| internalin A [Listeria monocytogenes]
gi|298359872|gb|ADI77515.1| internalin A [Listeria monocytogenes]
gi|298359880|gb|ADI77519.1| internalin A [Listeria monocytogenes]
gi|298359942|gb|ADI77550.1| internalin A [Listeria monocytogenes]
gi|298359946|gb|ADI77552.1| internalin A [Listeria monocytogenes]
gi|298360032|gb|ADI77595.1| internalin A [Listeria monocytogenes]
gi|298360064|gb|ADI77611.1| internalin A [Listeria monocytogenes]
gi|298360114|gb|ADI77636.1| internalin A [Listeria monocytogenes]
gi|298360202|gb|ADI77680.1| internalin A [Listeria monocytogenes]
gi|298360282|gb|ADI77720.1| internalin A [Listeria monocytogenes]
gi|298360284|gb|ADI77721.1| internalin A [Listeria monocytogenes]
gi|298360314|gb|ADI77736.1| internalin A [Listeria monocytogenes]
gi|298360330|gb|ADI77744.1| internalin A [Listeria monocytogenes]
gi|298360346|gb|ADI77752.1| internalin A [Listeria monocytogenes]
gi|298360410|gb|ADI77784.1| internalin A [Listeria monocytogenes]
gi|298360420|gb|ADI77789.1| internalin A [Listeria monocytogenes]
gi|298360440|gb|ADI77799.1| internalin A [Listeria monocytogenes]
gi|298360454|gb|ADI77806.1| internalin A [Listeria monocytogenes]
gi|298360470|gb|ADI77814.1| internalin A [Listeria monocytogenes]
gi|298360494|gb|ADI77826.1| internalin A [Listeria monocytogenes]
gi|298360506|gb|ADI77832.1| internalin A [Listeria monocytogenes]
gi|298360604|gb|ADI77881.1| internalin A [Listeria monocytogenes]
gi|298360610|gb|ADI77884.1| internalin A [Listeria monocytogenes]
gi|298360612|gb|ADI77885.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|226223065|ref|YP_002757172.1| Internalin A [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|386731210|ref|YP_006204706.1| internalin A [Listeria monocytogenes 07PF0776]
gi|406703224|ref|YP_006753578.1| internalin A (LPXTG motif) [Listeria monocytogenes L312]
gi|167861892|gb|ACA05645.1| InlA [Listeria monocytogenes]
gi|167861914|gb|ACA05656.1| InlA [Listeria monocytogenes]
gi|167861978|gb|ACA05688.1| InlA [Listeria monocytogenes]
gi|194239396|emb|CAQ76838.1| internalin A [Listeria monocytogenes]
gi|225875527|emb|CAS04230.1| Internalin A [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|298359780|gb|ADI77469.1| internalin A [Listeria monocytogenes]
gi|384389968|gb|AFH79038.1| internalin A [Listeria monocytogenes 07PF0776]
gi|406360254|emb|CBY66527.1| internalin A (LPXTG motif) [Listeria monocytogenes L312]
Length = 800
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|290892407|ref|ZP_06555401.1| InlA protein [Listeria monocytogenes FSL J2-071]
gi|290557973|gb|EFD91493.1| InlA protein [Listeria monocytogenes FSL J2-071]
Length = 796
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 169 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 228 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 288 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 347
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 348 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 378
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 128 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 187
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 188 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 246
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 247 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 306
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 307 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 362
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 210 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 269
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 270 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 329
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 330 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 389
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 390 WLSAGHNQISDLTPLANLTRITQLGLND 417
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 91 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 150
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 151 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 210
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 211 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 270
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 271 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 312
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 91 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 150
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 151 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 209
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 210 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 255
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 77 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 133
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 134 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 193
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 194 LSFG-NQVTD 202
>gi|130774755|gb|ABO32392.1| InlA [Listeria monocytogenes]
gi|130774767|gb|ABO32398.1| InlA [Listeria monocytogenes]
gi|298359732|gb|ADI77445.1| internalin A [Listeria monocytogenes]
gi|298360004|gb|ADI77581.1| internalin A [Listeria monocytogenes]
gi|298360478|gb|ADI77818.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|313485079|gb|ADR53010.1| InlA [Listeria monocytogenes]
Length = 800
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|298360360|gb|ADI77759.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|322952088|gb|ADX21043.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|313485048|gb|ADR52999.1| InlA [Listeria monocytogenes]
gi|313485083|gb|ADR53012.1| InlA [Listeria monocytogenes]
Length = 800
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|390364102|ref|XP_001200508.2| PREDICTED: leucine-rich repeat-containing protein 49-like
[Strongylocentrotus purpuratus]
Length = 775
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 116/198 (58%), Gaps = 3/198 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
++G DHL L N I +IE++ L++L L+L DN+I I LD + +L L LG
Sbjct: 230 LEGEDHL---RLLNFQHNTIRRIEHLASLRRLIFLDLYDNRIEAISGLDTMRSLRVLMLG 286
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +IDNL +L KL++L L NR+ +EN++ L L L L+ N +T +++L + L
Sbjct: 287 KNRIQKIDNLTNLVKLDVLDLHGNRISKVENIDHLQELRVLNLAGNEITHVDSLCGMDSL 346
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ NKIS + ++ L LQ +++ N + +W+ ++ L ++ L + LD NP Q+
Sbjct: 347 TELNLRRNKISTVTDVDTLPSLQRLFLSFNLIMNWDDISCLADSTSLIEVSLDGNPFCQE 406
Query: 298 PNYRRKIKLVCPWIVQID 315
+Y+ I ++ Q+D
Sbjct: 407 ASYKSIILRNMGYLKQLD 424
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 100/157 (63%), Gaps = 1/157 (0%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I++IE++ L L L+LYDN++ I LDT+ +L +L L NRI++I L
Sbjct: 237 RLLNFQHNTIRRIEHLASLRRLIFLDLYDNRIEAISGLDTMRSLRVLMLGKNRIQKIDNL 296
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
+L L+ L L N+ISK+EN+DHL++L+VL L N+I +++L G+ +L EL L +NKI
Sbjct: 297 TNLVKLDVLDLHGNRISKVENIDHLQELRVLNLAGNEITHVDSLCGMDSLTELNLRRNKI 356
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
S + ++ +L L L L N + +++ L + T L
Sbjct: 357 STVTDVDTLPSLQRLFLSFNLIMNWDDISCLADSTSL 393
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 86/141 (60%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N + IE+L +L L LDL NRI I GLD + +L L L N+I KI+N
Sbjct: 236 LRLLNFQHNTIRRIEHLASLRRLIFLDLYDNRIEAISGLDTMRSLRVLMLGKNRIQKIDN 295
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+ +L KL VL+L N+I +EN+D L L L L N+I+ +D+L + L L+L+ N+
Sbjct: 296 LTNLVKLDVLDLHGNRISKVENIDHLQELRVLNLAGNEITHVDSLCGMDSLTELNLRRNK 355
Query: 203 LRTIENLEALTNLTQLYLSEN 223
+ T+ +++ L +L +L+LS N
Sbjct: 356 ISTVTDVDTLPSLQRLFLSFN 376
>gi|298359724|gb|ADI77441.1| truncated internalin A [Listeria monocytogenes]
gi|298359728|gb|ADI77443.1| truncated internalin A [Listeria monocytogenes]
gi|298359760|gb|ADI77459.1| truncated internalin A [Listeria monocytogenes]
gi|298359768|gb|ADI77463.1| truncated internalin A [Listeria monocytogenes]
gi|298359778|gb|ADI77468.1| truncated internalin A [Listeria monocytogenes]
gi|298359784|gb|ADI77471.1| truncated internalin A [Listeria monocytogenes]
gi|298359796|gb|ADI77477.1| truncated internalin A [Listeria monocytogenes]
gi|298359800|gb|ADI77479.1| truncated internalin A [Listeria monocytogenes]
gi|298359816|gb|ADI77487.1| truncated internalin A [Listeria monocytogenes]
gi|298359840|gb|ADI77499.1| truncated internalin A [Listeria monocytogenes]
gi|298359850|gb|ADI77504.1| truncated internalin A [Listeria monocytogenes]
gi|298359852|gb|ADI77505.1| truncated internalin A [Listeria monocytogenes]
gi|298359860|gb|ADI77509.1| truncated internalin A [Listeria monocytogenes]
gi|298359916|gb|ADI77537.1| truncated internalin A [Listeria monocytogenes]
gi|298359928|gb|ADI77543.1| truncated internalin A [Listeria monocytogenes]
gi|298359936|gb|ADI77547.1| truncated internalin A [Listeria monocytogenes]
gi|298359962|gb|ADI77560.1| truncated internalin A [Listeria monocytogenes]
gi|298359996|gb|ADI77577.1| truncated internalin A [Listeria monocytogenes]
gi|298360016|gb|ADI77587.1| truncated internalin A [Listeria monocytogenes]
gi|298360018|gb|ADI77588.1| truncated internalin A [Listeria monocytogenes]
gi|298360022|gb|ADI77590.1| truncated internalin A [Listeria monocytogenes]
gi|298360024|gb|ADI77591.1| truncated internalin A [Listeria monocytogenes]
gi|298360046|gb|ADI77602.1| truncated internalin A [Listeria monocytogenes]
gi|298360048|gb|ADI77603.1| truncated internalin A [Listeria monocytogenes]
gi|298360058|gb|ADI77608.1| truncated internalin A [Listeria monocytogenes]
gi|298360062|gb|ADI77610.1| truncated internalin A [Listeria monocytogenes]
gi|298360088|gb|ADI77623.1| truncated internalin A [Listeria monocytogenes]
gi|298360120|gb|ADI77639.1| truncated internalin A [Listeria monocytogenes]
gi|298360152|gb|ADI77655.1| truncated internalin A [Listeria monocytogenes]
gi|298360168|gb|ADI77663.1| truncated internalin A [Listeria monocytogenes]
gi|298360204|gb|ADI77681.1| truncated internalin A [Listeria monocytogenes]
gi|298360210|gb|ADI77684.1| truncated internalin A [Listeria monocytogenes]
gi|298360224|gb|ADI77691.1| truncated internalin A [Listeria monocytogenes]
gi|298360248|gb|ADI77703.1| truncated internalin A [Listeria monocytogenes]
gi|298360250|gb|ADI77704.1| truncated internalin A [Listeria monocytogenes]
gi|298360272|gb|ADI77715.1| truncated internalin A [Listeria monocytogenes]
gi|298360308|gb|ADI77733.1| truncated internalin A [Listeria monocytogenes]
gi|298360340|gb|ADI77749.1| truncated internalin A [Listeria monocytogenes]
gi|298360382|gb|ADI77770.1| truncated internalin A [Listeria monocytogenes]
gi|298360392|gb|ADI77775.1| truncated internalin A [Listeria monocytogenes]
gi|298360408|gb|ADI77783.1| truncated internalin A [Listeria monocytogenes]
gi|298360418|gb|ADI77788.1| truncated internalin A [Listeria monocytogenes]
gi|298360430|gb|ADI77794.1| truncated internalin A [Listeria monocytogenes]
gi|298360438|gb|ADI77798.1| truncated internalin A [Listeria monocytogenes]
gi|298360444|gb|ADI77801.1| truncated internalin A [Listeria monocytogenes]
gi|298360446|gb|ADI77802.1| truncated internalin A [Listeria monocytogenes]
gi|298360476|gb|ADI77817.1| truncated internalin A [Listeria monocytogenes]
gi|298360482|gb|ADI77820.1| truncated internalin A [Listeria monocytogenes]
gi|298360484|gb|ADI77821.1| truncated internalin A [Listeria monocytogenes]
gi|298360486|gb|ADI77822.1| truncated internalin A [Listeria monocytogenes]
gi|298360490|gb|ADI77824.1| truncated internalin A [Listeria monocytogenes]
gi|298360512|gb|ADI77835.1| truncated internalin A [Listeria monocytogenes]
gi|298360526|gb|ADI77842.1| truncated internalin A [Listeria monocytogenes]
gi|298360534|gb|ADI77846.1| truncated internalin A [Listeria monocytogenes]
gi|298360574|gb|ADI77866.1| truncated internalin A [Listeria monocytogenes]
gi|298360584|gb|ADI77871.1| truncated internalin A [Listeria monocytogenes]
gi|298360618|gb|ADI77888.1| truncated internalin A [Listeria monocytogenes]
gi|298360622|gb|ADI77890.1| truncated internalin A [Listeria monocytogenes]
gi|298360626|gb|ADI77892.1| truncated internalin A [Listeria monocytogenes]
gi|298360628|gb|ADI77893.1| truncated internalin A [Listeria monocytogenes]
gi|298360646|gb|ADI77902.1| truncated internalin A [Listeria monocytogenes]
gi|298360650|gb|ADI77904.1| truncated internalin A [Listeria monocytogenes]
gi|298360664|gb|ADI77911.1| truncated internalin A [Listeria monocytogenes]
gi|298360686|gb|ADI77922.1| truncated internalin A [Listeria monocytogenes]
gi|298360702|gb|ADI77930.1| truncated internalin A [Listeria monocytogenes]
gi|298360718|gb|ADI77938.1| truncated internalin A [Listeria monocytogenes]
gi|443428870|gb|AGC92234.1| truncated internalin A [Listeria monocytogenes]
Length = 605
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|322952090|gb|ADX21044.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|313485044|gb|ADR52997.1| InlA [Listeria monocytogenes]
Length = 771
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|85679220|gb|ABC72026.1| InlA [Listeria monocytogenes]
Length = 794
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 165 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 223
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 224 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 283
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L L LT L L+EN L I + + + L L
Sbjct: 284 ISNLAPLSGLTKLTELKLGANQISNISPLAGLAALTNLELNENQLEDISPISNLKNLTYL 343
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 344 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 374
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 113/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 265
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GL L L L +
Sbjct: 266 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLAALTNLELNE 325
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 326 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 385
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 386 WLSAGHNQISDLTPLANLTRITQLGLND 413
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 125/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 107 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLN 166
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 167 RLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 226
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 227 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 286
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A L L +N+NQ+ D + ++ L+N L T+
Sbjct: 287 LAPLSGLTKLTELKLGANQISNISPLAGLAALTNLELNENQLEDISPISNLKNLTYL-TL 345
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 346 YFNNISDISPVSS 358
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 146
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G
Sbjct: 147 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLT 206
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 207 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 266
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 267 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 308
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 146
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 147 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 251
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 88/166 (53%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 252 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 311
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L LA L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 312 LAGLAALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 371
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 372 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 417
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 73 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 129
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 130 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQ 189
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 190 LSFG-NQVTD 198
>gi|150371858|dbj|BAF65718.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + L +L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLISLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLGSLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 118/216 (54%), Gaps = 1/216 (0%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
S + +++L N + ++ + LTTL+ L++ N+++ I L L NLE L + N+I
Sbjct: 183 SGLISLQQLSFG-NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI 241
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
+I L L NL++L L N++ I + L L L+L +N+I + L GLT L EL
Sbjct: 242 SDITPLGILTNLDELSLNGNQLKDIGTLGSLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LG N+IS I LA LT L L L N+L I + L NLT L L N ++ I + S
Sbjct: 302 LGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLT 361
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
KL+ L NK+S + ++A+LT + NQ+SD
Sbjct: 362 KLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISD 397
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLGSLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLISLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLGSLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ ++ + +L L LEL N I I L GL +L++L G
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLISLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLGSLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L L +L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLISLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLGSLTNLTDLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 286 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 345
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 346 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 405
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 406 RITQLGLNDQAWT 418
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ L LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLISLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|85679226|gb|ABC72029.1| InlA [Listeria monocytogenes]
Length = 791
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 165 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 223
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 224 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 283
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 284 ISNLAPLSGLTKLTELKLGTNQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 343
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 344 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 374
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 134/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I++L L NL L+LS N I +I L
Sbjct: 124 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDSLKNLTNLNRLELSSNTISDISALSG 183
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 184 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 242
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 243 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 302
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 303 TNQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 358
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 265
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 266 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGTNQISNISPLAGLTALTNLELNE 325
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 326 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 385
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 386 WLSAGHNQISDLTPLANLTRITQLGLND 413
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 114/222 (51%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L+NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 146
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+++ +L L LEL N I I L GLTNL++L G
Sbjct: 147 TLFNNQITDIDSLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 206
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 207 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 266
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 267 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGTNQISN 308
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 146
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID+L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 147 TLFNNQITDIDSLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 251
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 73 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 129
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I++L + L L+++ N IS I ++ LT LQ+
Sbjct: 130 QIADITPLANLSNLTGLTLFNNQITDIDSLKNLTNLNRLELSSNTISDISALSGLTNLQQ 189
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 190 LSFG-NQVTD 198
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 195 ILSLQCNRL--RTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQN 252
+ +LQ +RL ++I+ LE L NLTQ+ S N LT I L KL + + N+I+ I
Sbjct: 77 VTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITP 136
Query: 253 IAHLTELQEFWINDNQVSDWNTVNVLEN 280
+A+L+ L + +NQ++D +++ L N
Sbjct: 137 LANLSNLTGLTLFNNQITDIDSLKNLTN 164
>gi|443428862|gb|AGC92230.1| internalin A [Listeria monocytogenes]
Length = 800
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + L +L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLISLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLGSLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 118/216 (54%), Gaps = 1/216 (0%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
S + +++L N + ++ + LTTL+ L++ N+++ I L L NLE L + N+I
Sbjct: 183 SGLISLQQLSFG-NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI 241
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
+I L L NL++L L N++ I + L L L+L +N+I + L GLT L EL
Sbjct: 242 SDITPLGILTNLDELSLNGNQLKDIGTLGSLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LG N+IS I LA LT L L L N+L I + L NLT L L N ++ I + S
Sbjct: 302 LGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLT 361
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
KL+ L NK+S + ++A+LT + NQ+SD
Sbjct: 362 KLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISD 397
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLGSLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I ++ L +L NL
Sbjct: 108 NQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLISLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLGSLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + +L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ +D L +LT LN L L N + I L L +L QL N +T ++ L +
Sbjct: 148 TLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLISLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLGSLTNLTDLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 286 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 345
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 346 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 405
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 406 RITQLGLNDQAWT 418
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L +LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T ++ L + L L+++ N IS I ++ L LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDLDPLKNLTNLNRLELSSNTISDISALSGLISLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|219821357|gb|ACL37816.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE + +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 167 LAKLTNLESIIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 133/237 (56%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + L+ L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 67 ILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 126
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE + N+IS
Sbjct: 127 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESIIATNNQISD 185
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 186 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 245
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 246 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ + +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESIIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 209 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 329 WLSAGHNQISDLTPLANLTRITQLGLND 356
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESIIATNNQISDITPLGILTN 194
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 195 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 254
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 255 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 314
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 315 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 360
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
>gi|56797881|emb|CAH04902.1| internalin A [Listeria monocytogenes]
Length = 773
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L +LE LD+S N++ +I
Sbjct: 139 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTSLERLDISSNKVSDISV 197
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L ++
Sbjct: 198 LAKLTNLESLIATNNQISDITPLGILANLDELSLNGNQLKDIGTLASLTNLTDLDLANDQ 257
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 258 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 317
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 318 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 348
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 132/237 (55%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 98 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 157
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 158 LTNLQQLSF-GNQVTDLKPLANLTSLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 216
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L L L+ LSL N+L+ I L +LTNLT L L+ + ++ + L KL L +
Sbjct: 217 ITPLGILANLDELSLNGNQLKDIGTLASLTNLTDLDLANDQISNLAPLSGLTKLTELKLG 276
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 277 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 332
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 180 TSLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILANLDELSLNGNQLKDI 239
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +++IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 240 GTLASLTNLTDLDLANDQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 299
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 300 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 359
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 360 WLSAGHNQISDLTPLANLTRITQLGLND 387
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 61 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 120
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 121 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 179
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 180 TSLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILAN 225
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L ++Q++ + L L L L L N+I I
Sbjct: 226 LDELSLNGNQLKDIGTLASLTNLTDLDLANDQISNLAPLSGLTKLTELKLGANQISNISP 285
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 286 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 345
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 346 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 391
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 47 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 103
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 104 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 163
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 164 LSFG-NQVTD 172
>gi|21674346|ref|NP_662411.1| Rab family protein [Chlorobium tepidum TLS]
gi|21647522|gb|AAM72753.1| Rab family protein [Chlorobium tepidum TLS]
Length = 1102
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 119/208 (57%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I I + L +L EL L N ++ I L++L +L L LS N+I +I L
Sbjct: 134 LQLSSNQITDIAPLASLKSLTELSLSGNNISDIAPLESLKSLTELSLSSNQITDIAPLAS 193
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L +L +L L SN+IS I ++ LK L L+L N+I I L+ L +L EL L N+I+
Sbjct: 194 LKSLTELSLSSNQISDIAPLESLKSLTELQLSRNQISDIAPLESLKSLTELQLSSNQITD 253
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I LASL L L L N++ I LE+L +L++L+L+ N +T I L S L L+++
Sbjct: 254 IAPLASLKSLTELQLSRNQISDIAPLESLNSLSKLWLNGNQITDIAPLASLNSLTELELS 313
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSD 271
N+I+ I +A L L W++ NQ+SD
Sbjct: 314 SNQITDIAPLASLKSLSTLWLSSNQISD 341
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 114/208 (54%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I I + L +L L L+ N+++ I L++L +L L LS N+I +I L
Sbjct: 90 LWLDRNQITDIAPLASLNSLSMLWLFGNKISDIAPLESLKSLTELQLSSNQITDIAPLAS 149
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L +L +L L N IS I ++ LK L L L N+I I L L +L EL L N+IS
Sbjct: 150 LKSLTELSLSGNNISDIAPLESLKSLTELSLSSNQITDIAPLASLKSLTELSLSSNQISD 209
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L SL L L L N++ I LE+L +LT+L LS N +T I L S + L L ++
Sbjct: 210 IAPLESLKSLTELQLSRNQISDIAPLESLKSLTELQLSSNQITDIAPLASLKSLTELQLS 269
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSD 271
N+IS I + L L + W+N NQ++D
Sbjct: 270 RNQISDIAPLESLNSLSKLWLNGNQITD 297
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 130/235 (55%), Gaps = 3/235 (1%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I I + L +L EL L NQ+T I L +L +L L LS N+I +I L+
Sbjct: 156 LSLSGNNISDIAPLESLKSLTELSLSSNQITDIAPLASLKSLTELSLSSNQISDIAPLES 215
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L +L +L L N+IS I ++ LK L L+L N+I I L L +L EL L +N+IS
Sbjct: 216 LKSLTELQLSRNQISDIAPLESLKSLTELQLSSNQITDIAPLASLKSLTELQLSRNQISD 275
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L SL L+ L L N++ I L +L +LT+L LS N +T I L S + L TL ++
Sbjct: 276 IAPLESLNSLSKLWLNGNQITDIAPLASLNSLTELELSSNQITDIAPLASLKSLSTLWLS 335
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDP 298
N+IS I +A L L E ++ NQ+SD ++ L + L + RNP+ + P
Sbjct: 336 SNQISDIAPLASLESLSELSLSSNQISD---ISPLASLNSLTGFDVRRNPIKRLP 387
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 124/224 (55%), Gaps = 3/224 (1%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I I + L +L L L NQ+T I L +L +L +L L N+I +I L+ L +L
Sbjct: 73 NQITDISPLASLNSLSMLWLDRNQITDIAPLASLNSLSMLWLFGNKISDIAPLESLKSLT 132
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L L SN+I+ I + LK L L L N I I L+ L +L EL L N+I+ I LA
Sbjct: 133 ELQLSSNQITDIAPLASLKSLTELSLSGNNISDIAPLESLKSLTELSLSSNQITDIAPLA 192
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
SL L LSL N++ I LE+L +LT+L LS N ++ I L S + L L ++ N+I+
Sbjct: 193 SLKSLTELSLSSNQISDIAPLESLKSLTELQLSRNQISDIAPLESLKSLTELQLSSNQIT 252
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
I +A L L E ++ NQ+SD + LE+ L ++L+ N
Sbjct: 253 DIAPLASLKSLTELQLSRNQISD---IAPLESLNSLSKLWLNGN 293
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 112/205 (54%), Gaps = 3/205 (1%)
Query: 91 NQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLK 150
NQ+T I L +L +L +L L N+I +I L L +L L+L NKIS I ++ LK L
Sbjct: 73 NQITDISPLASLNSLSMLWLDRNQITDIAPLASLNSLSMLWLFGNKISDIAPLESLKSLT 132
Query: 151 VLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLE 210
L+L N+I I L L +L EL L N IS I L SL L LSL N++ I L
Sbjct: 133 ELQLSSNQITDIAPLASLKSLTELSLSGNNISDIAPLESLKSLTELSLSSNQITDIAPLA 192
Query: 211 ALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
+L +LT+L LS N ++ I L S + L L ++ N+IS I + L L E ++ NQ++
Sbjct: 193 SLKSLTELSLSSNQISDIAPLESLKSLTELQLSRNQISDIAPLESLKSLTELQLSSNQIT 252
Query: 271 DWNTVNVLENNKQLQTIYLDRNPVA 295
D + L + K L + L RN ++
Sbjct: 253 D---IAPLASLKSLTELQLSRNQIS 274
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 113/219 (51%), Gaps = 3/219 (1%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I I + L +L EL+L NQ++ I L++L +L L LS N+I +I L
Sbjct: 200 LSLSSNQISDIAPLESLKSLTELQLSRNQISDIAPLESLKSLTELQLSSNQITDIAPLAS 259
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L +L +L L N+IS I ++ L L L L N+I I L L +L EL L N+I+
Sbjct: 260 LKSLTELQLSRNQISDIAPLESLNSLSKLWLNGNQITDIAPLASLNSLTELELSSNQITD 319
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I LASL L+ L L N++ I L +L +L++L LS N ++ I L S L DV
Sbjct: 320 IAPLASLKSLSTLWLSSNQISDIAPLASLESLSELSLSSNQISDISPLASLNSLTGFDVR 379
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTV--NVLEN 280
N I + +++ W ND S + T N LE+
Sbjct: 380 RNPIKRLPETITGFDMEILW-NDFSSSGFITFFDNPLES 417
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 3/133 (2%)
Query: 160 RIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLY 219
RII+ L+ L +L EL L N+I+ I LASL L++L L N++ I L +L +L+ L+
Sbjct: 54 RIIQPLESLKSLSELSLSSNQITDISPLASLNSLSMLWLDRNQITDIAPLASLNSLSMLW 113
Query: 220 LSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
L N ++ I L S + L L ++ N+I+ I +A L L E ++ N +SD + LE
Sbjct: 114 LFGNKISDIAPLESLKSLTELQLSSNQITDIAPLASLKSLTELSLSGNNISD---IAPLE 170
Query: 280 NNKQLQTIYLDRN 292
+ K L + L N
Sbjct: 171 SLKSLTELSLSSN 183
>gi|223698613|gb|ACN18982.1| internalin A [Listeria monocytogenes]
Length = 715
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + L +L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 81 LNRLELSSNTISDISALSGLISLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 139
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 140 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 199
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 200 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 259
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 260 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 290
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 118/216 (54%), Gaps = 1/216 (0%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
S + +++L N + ++ + LTTL+ L++ N+++ I L L NLE L + N+I
Sbjct: 98 SGLISLQQLSFG-NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI 156
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
+I L L NL++L L N++ I + L L L+L +N+I + L GLT L EL
Sbjct: 157 SDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 216
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LG N+IS I LA LT L L L N+L I + L NLT L L N ++ I + S
Sbjct: 217 LGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLT 276
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
KL+ L NK+S + ++A+LT + NQ+SD
Sbjct: 277 KLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISD 312
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 181
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 182 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 241
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 242 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 301
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 302 WLSAGHNQISDLTPLANLTRITQVGLND 329
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 23 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 82
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 83 RLELSSNTISDISALSGLISLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 142
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 143 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 202
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 203 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 261
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 262 YFNNISDISPVSS 274
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GL +L++L G
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLISLQQLSFGNQVTDLKPLANLT 122
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 123 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 182
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 183 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 224
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 3 IKSIDGVEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 62
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L L +L QL N +T ++ L +
Sbjct: 63 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLISLQQLSFG-NQVTDLKPLANL 121
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 122 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 167
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 168 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 227
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 228 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 287
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQ+ L++ T
Sbjct: 288 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQVGLNDQAWT 333
>gi|294358387|gb|ADE73846.1| InlA [Listeria monocytogenes]
Length = 800
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 118/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + L +L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLISLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 118/216 (54%), Gaps = 1/216 (0%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
S + +++L N + ++ + LTTL+ L++ N+++ I L L NLE L + N+I
Sbjct: 183 SGLISLQQLSFG-NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI 241
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
+I L L NL++L L N++ I + L L L+L +N+I + L GLT L EL
Sbjct: 242 SDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 301
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LG N+IS I LA LT L L L N+L I + L NLT L L N ++ I + S
Sbjct: 302 LGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLT 361
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
KL+ L NK+S + ++A+LT + NQ+SD
Sbjct: 362 KLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISD 397
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQVGLND 414
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 126/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L SN IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSSNTISDISALSGLISLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y D +PV+
Sbjct: 347 YFNNISDISPVSS 359
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GL +L++L G
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLISLQQLSFGNQVTDLKPLANLT 207
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L LD+A N+IS + ++ LT+L E + NQ+S+
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISN 309
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGVEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L L +L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLISLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQ+ L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQVGLNDQAWT 418
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ ++ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGVEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ L LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLISLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|422408524|ref|ZP_16485485.1| internalin A, partial [Listeria monocytogenes FSL F2-208]
gi|313610685|gb|EFR85741.1| internalin A [Listeria monocytogenes FSL F2-208]
Length = 439
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL + N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 41 LNRLEITGNTISDISVLSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 99
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE+L +N+IS I + L L L L N+++ I L LTNL L + N+
Sbjct: 100 LAKLTNLERLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTSLDVANNQ 159
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I +E LT LT L L EN L I + + + L L
Sbjct: 160 ISNLAPLSGLTKLTELELGYNQISNISPIEGLTALTSLELHENQLEDISPISNLKNLTYL 219
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 220 ALYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 259
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 116/208 (55%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 82 TTLERLDISSNKVSDISVLAKLTNLERLIATNNQISDITPLGILTNLDELSLNGNQLKDI 141
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L + +N+IS + + L KL LELG N+I I ++GLT L L L +
Sbjct: 142 GTLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQISNISPIEGLTALTSLELHE 201
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 202 NQLEDISPISNLKNLTYLALYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 261
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L A+N+IS + +A+LT + E +ND
Sbjct: 262 WLSAAHNQISDLTPLANLTRISELGLND 289
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 121/215 (56%), Gaps = 7/215 (3%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLT---VIENLDTLINLEILDLSFNRIREIKGLDHLA 125
N I I + LT L L L++NQ+T ++NL L LEI + N I +I L L
Sbjct: 5 NQITDISPLANLTNLTGLTLFNNQITDIDALKNLTNLNRLEI---TGNTISDISVLSGLT 61
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+L++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS I
Sbjct: 62 SLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLERLIATNNQISDIT 120
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L LT L+ LSL N+L+ I L +LTNLT L ++ N ++ + L KL L++ YN
Sbjct: 121 PLGILTNLDELSLNGNQLKDIGTLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYN 180
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+IS I I LT L +++NQ+ D + ++ L+N
Sbjct: 181 QISNISPIEGLTALTSLELHENQLEDISPISNLKN 215
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 96/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +ERL+ N I I + +LT L EL L NQL I L +L NL LD++ N+I
Sbjct: 101 AKLTNLERLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTSLDVANNQI 160
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L N+IS I ++ L L LEL +N+ I I NL
Sbjct: 161 SNLAPLSGLTKLTELELGYNQISNISPIEGLTALTSLELHENQLEDISPISNLKNLTYLA 220
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 221 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAAHNQISDLTPLANLT 280
Query: 214 NLTQLYLSENGLT 226
+++L L++ T
Sbjct: 281 RISELGLNDQAWT 293
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Query: 154 LGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
+ +N+I I L LTNL L L N+I+ ID L +LT LN L + N + I L LT
Sbjct: 2 MNNNQITDISPLANLTNLTGLTLFNNQITDIDALKNLTNLNRLEITGNTISDISVLSGLT 61
Query: 214 NLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWN 273
+L QL N +T ++ L + LE LD++ NK+S I +A LT L+ +NQ+SD
Sbjct: 62 SLQQLSFG-NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLERLIATNNQISDIT 120
Query: 274 TVNVLEN 280
+ +L N
Sbjct: 121 PLGILTN 127
>gi|85679222|gb|ABC72027.1| InlA [Listeria monocytogenes]
Length = 791
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 119/211 (56%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL + N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 165 LNRLEITGNTISDISVLSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 223
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE+L +N+IS I + L L L L N+++ I L LTNL L + N+
Sbjct: 224 LAKLTNLERLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTSLDVANNQ 283
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I +E LT LT L L EN L I + + + L L
Sbjct: 284 ISNLAPLSGLTKLTELELGYNQISNISPIEGLTALTSLELHENQLEDISPISNLKNLTYL 343
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 344 ALYFNNISDISPVSSLTKLQRLFFYNNKVSD 374
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 116/208 (55%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLERLIATNNQISDITPLGILTNLDELSLNGNQLKDI 265
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L + +N+IS + + L KL LELG N+I I ++GLT L L L +
Sbjct: 266 GTLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQISNISPIEGLTALTSLELHE 325
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 326 NQLEDISPISNLKNLTYLALYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 385
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L A+N+IS + +A+LT + E +ND
Sbjct: 386 WLSAAHNQISDLTPLANLTRISELGLND 413
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 119/236 (50%), Gaps = 21/236 (8%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
+N + I + LT L ++ + +NQ+T I L L NL L L N+I +I L +L
Sbjct: 104 FGFNQLTDITPLKDLTKLVDIVMNNNQITDISPLANLTNLTGLTLFNNQITDIDALKNLT 163
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIEN 164
NL +L + N IS I + L L+ L G+ NK+ I
Sbjct: 164 NLNRLEITGNTISDISVLSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISV 223
Query: 165 LDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENG 224
L LTNLE L N+IS I L LT L+ LSL N+L+ I L +LTNLT L ++ N
Sbjct: 224 LAKLTNLERLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTSLDVANNQ 283
Query: 225 LTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
++ + L KL L++ YN+IS I I LT L +++NQ+ D + ++ L+N
Sbjct: 284 ISNLAPLSGLTKLTELELGYNQISNISPIEGLTALTSLELHENQLEDISPISNLKN 339
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 87 IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISPLANLTNLTGL 146
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LE+ N I I L GLT+L++L G
Sbjct: 147 TLFNNQITDIDALKNLTNLNRLEITGNTISDISVLSGLTSLQQLSFGNQVTDLKPLANLT 206
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 207 TLERLDISSNKVSDISVLAKLTNLERLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 266
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L +LDVA N+IS + ++ LT+L E + NQ+S+
Sbjct: 267 TLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQISN 308
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 87 IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISPLANLTNLTGL 146
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L + N + I L LT+L QL N +T ++ L +
Sbjct: 147 TLFNNQITDIDALKNLTNLNRLEITGNTISDISVLSGLTSLQQLSFG-NQVTDLKPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 206 TTLERLDISSNKVSDISVLAKLTNLERLIATNNQISDITPLGILTN 251
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 96/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +ERL+ N I I + +LT L EL L NQL I L +L NL LD++ N+I
Sbjct: 225 AKLTNLERLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTSLDVANNQI 284
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L N+IS I ++ L L LEL +N+ I I NL
Sbjct: 285 SNLAPLSGLTKLTELELGYNQISNISPIEGLTALTSLELHENQLEDISPISNLKNLTYLA 344
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 345 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAAHNQISDLTPLANLT 404
Query: 214 NLTQLYLSENGLT 226
+++L L++ T
Sbjct: 405 RISELGLNDQAWT 417
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ G N+++ I L LTKL + + N
Sbjct: 73 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNN 129
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L++ N IS I ++ LT LQ+
Sbjct: 130 QITDISPLANLTNLTGLTLFNNQITDIDALKNLTNLNRLEITGNTISDISVLSGLTSLQQ 189
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 190 LSFG-NQVTD 198
>gi|219821285|gb|ACL37768.1| internalin A [Listeria monocytogenes]
gi|219821315|gb|ACL37788.1| internalin A [Listeria monocytogenes]
gi|219821321|gb|ACL37792.1| internalin A [Listeria monocytogenes]
gi|219821327|gb|ACL37796.1| internalin A [Listeria monocytogenes]
gi|219821345|gb|ACL37808.1| internalin A [Listeria monocytogenes]
Length = 742
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 131/232 (56%), Gaps = 6/232 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L L NL+
Sbjct: 72 NQITDISPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQ 131
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS I L
Sbjct: 132 QLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLG 190
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L+ LSL N+L+ I L +LTNLT L ++ N ++ + L KL L++ YN+IS
Sbjct: 191 ILTNLDELSLNGNQLKDIGTLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQIS 250
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
I I LT L +++NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 251 NISPIEGLTALTSLELHENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 117/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL L + N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTSLDVANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I +E LT LT L L EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELELGYNQISNISPIEGLTALTSLELHENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 117/210 (55%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L + +N+IS + + L KL LELG N+I I ++GLT L L L +
Sbjct: 209 GTLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQISNISPIEGLTALTSLELHE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQ 268
L A+N+IS + +A+LT + E +ND +
Sbjct: 329 WLSAAHNQISDLTPLANLTRISELGLNDQE 358
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISPLANLTNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L +LDVA N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQISN 251
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 30 IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISPLANLTNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ G N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QITDISPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
+LD +T L+ LG I ID L L L ++ N+L I L+ LT L + ++ N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNN 72
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
+T I L + L L + N+I+ I + +LT L ++ N +SD + ++ L N +Q
Sbjct: 73 QITDISPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 284 LQ 285
L
Sbjct: 133 LS 134
>gi|219821270|gb|ACL37758.1| internalin A [Listeria monocytogenes]
Length = 739
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 131/232 (56%), Gaps = 6/232 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L L NL+
Sbjct: 72 NQITDISPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQ 131
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS I L
Sbjct: 132 QLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLG 190
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L+ LSL N+L+ I L +LTNLT L ++ N ++ + L KL L++ YN+IS
Sbjct: 191 ILTNLDELSLNGNQLKDIGTLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQIS 250
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
I I LT L +++NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 251 NISPIEGLTALTSLELHENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 301
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 117/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 108 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 166
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL L + N+
Sbjct: 167 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTSLDVANNQ 226
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I +E LT LT L L EN L I + + + L L
Sbjct: 227 ISNLAPLSGLTKLTELELGYNQISNISPIEGLTALTSLELHENQLEDISPISNLKNLTYL 286
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 287 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 317
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 117/210 (55%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 208
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L + +N+IS + + L KL LELG N+I I ++GLT L L L +
Sbjct: 209 GTLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQISNISPIEGLTALTSLELHE 268
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 269 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 328
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQ 268
L A+N+IS + +A+LT + E +ND +
Sbjct: 329 WLSAAHNQISDLTPLANLTRISELGLNDQE 358
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 112/222 (50%), Gaps = 21/222 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L L ++ NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 30 IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISPLANLTNLTGL 89
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------------- 177
L +N+I+ I+ + +L L LEL N I I L GLTNL++L G
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFGNQVTDLKPLANLT 149
Query: 178 --------KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NK+S I LA LT L L N++ I L LTNL +L L+ N L I
Sbjct: 150 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 209
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L S L +LDVA N+IS + ++ LT+L E + NQ+S+
Sbjct: 210 TLASLTNLTSLDVANNQISNLAPLSGLTKLTELELGYNQISN 251
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 30 IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNNQITDISPLANLTNLTGL 89
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 90 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 148
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 149 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 194
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ G N+++ I L LTKL + + N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNN 72
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 73 QITDISPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 133 LSFG-NQVTD 141
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
+LD +T L+ LG I ID L L L ++ N+L I L+ LT L + ++ N
Sbjct: 16 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFGFNQLTDITPLKDLTKLVDIVMNNN 72
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
+T I L + L L + N+I+ I + +LT L ++ N +SD + ++ L N +Q
Sbjct: 73 QITDISPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 132
Query: 284 LQ 285
L
Sbjct: 133 LS 134
>gi|167861956|gb|ACA05677.1| InlA [Listeria monocytogenes]
Length = 800
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 117/211 (55%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTNLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L LE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LARLPTLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 131/237 (55%), Gaps = 6/237 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 125 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 184
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L N+++ ++ + +L L+ L++ NK+ I L L LE L N+IS
Sbjct: 185 LTNLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLARLPTLESLIATNNQISD 243
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 244 ITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLG 303
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQ 296
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 304 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSS 359
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + L TL+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVSDISVLARLPTLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGHNQISDLTPLANLTRITQLGLND 414
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A L L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLARLPTLESLIATNNQISDITPLGILTN 252
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N +K I + LT L +L+L +NQ++ + L L L L L N+I I
Sbjct: 253 LDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N++ I + +LK L L L N I I + LT L+ L+ NK
Sbjct: 313 LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+S + +LA+LT +N LS N++ + L LT +TQL L++ T
Sbjct: 373 VSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWT 418
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|298360724|gb|ADI77941.1| truncated internalin A [Listeria monocytogenes]
Length = 403
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 225 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L+ LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 285 ISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 345 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 384
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 124/248 (50%), Gaps = 26/248 (10%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL +L L SN IS
Sbjct: 119 LTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISD 178
Query: 140 IENVDHLKKLKVLELGD---------------------NKIRIIENLDGLTNLEELYLGK 178
I + L L+ L G+ NK+ I L LTNLE L
Sbjct: 179 ISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATN 238
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL
Sbjct: 239 NQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLT 298
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPV 294
L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV
Sbjct: 299 ELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPV 357
Query: 295 AQDPNYRR 302
+ +R
Sbjct: 358 SSLTKLQR 365
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 252
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 104/192 (54%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 208 TLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIG 267
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +N
Sbjct: 268 TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNEN 327
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 328 QLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINW 387
Query: 240 LDVAYNKISIIQ 251
L + K++I+
Sbjct: 388 LRLGITKLAILH 399
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 87/166 (52%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
+ L L L +L L +N+IS I + L L LEL +N++ I + L NL L
Sbjct: 286 SNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 345
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLS 221
L N IS I ++SLTKL L N++ + +L LTN+ L L
Sbjct: 346 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLRLG 391
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N+
Sbjct: 75 LDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQ 131
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 132 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 191
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 192 SFG-NQVTD 199
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 195 ILSLQCNRL--RTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQN 252
+ +LQ +RL ++I+ LE L NLTQ+ S N LT I L KL + + N+I+ I
Sbjct: 78 VTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITP 137
Query: 253 IAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+A+LT L + +NQ++D ++ L+N L + L N ++
Sbjct: 138 LANLTNLTGLTLFNNQITD---IDPLKNLTNLNRLELSSNTIS 177
>gi|295673060|ref|XP_002797076.1| protein phosphatase 1 regulatory subunit SDS22 [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226282448|gb|EEH38014.1| protein phosphatase 1 regulatory subunit SDS22 [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 234
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 84/125 (67%), Gaps = 1/125 (0%)
Query: 61 IERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+E+L LR N I ++ L TL +L+LYDN ++ I+ L+ L L LD SFN I+ IK
Sbjct: 106 LEKLCLRQNQISRLSFPENLWPTLTDLDLYDNMISHIKGLEHLSKLTSLDFSFNNIKHIK 165
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL +L+ LY N+I KIE ++ LK+L+ LEL NKIR IENLD L LEEL+LGKN
Sbjct: 166 NISHLVHLKDLYFVQNRIQKIEGLEGLKELRNLELAANKIRDIENLDSLIGLEELWLGKN 225
Query: 180 KISRI 184
KI+ I
Sbjct: 226 KITEI 230
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 80/133 (60%), Gaps = 1/133 (0%)
Query: 98 NLDTLINLEILDLSFNRIREIKGLDHL-ANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
+L+ NLE L L N+I + ++L L L L N IS I+ ++HL KL L+
Sbjct: 99 HLERFTNLEKLCLRQNQISRLSFPENLWPTLTDLDLYDNMISHIKGLEHLSKLTSLDFSF 158
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
N I+ I+N+ L +L++LY +N+I +I+ L L +L L L N++R IENL++L L
Sbjct: 159 NNIKHIKNISHLVHLKDLYFVQNRIQKIEGLEGLKELRNLELAANKIRDIENLDSLIGLE 218
Query: 217 QLYLSENGLTTIE 229
+L+L +N +T I+
Sbjct: 219 ELWLGKNKITEIK 231
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 108/229 (47%), Gaps = 20/229 (8%)
Query: 34 SLDNPDEESEAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQL 93
S NP + ++ T+ E +SK W+ ++E+ +L + ++ E D
Sbjct: 12 STSNPSQNNDLNDTQGSPEMRDSK---------GWDGKSRVEHHAVLASQEDPEDSDENA 62
Query: 94 TVIENLDTLINL--------EILDLSFNRIREIKGL--DHLANLEKLYLCSNKISKIENV 143
+ +D +L + +DL RI + L + NLEKL L N+IS++
Sbjct: 63 LPPQEIDADEDLLSELSNDVDDIDLVHCRITSLPALHLERFTNLEKLCLRQNQISRLSFP 122
Query: 144 DHL-KKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
++L L L+L DN I I+ L+ L+ L L N I I N++ L L L NR
Sbjct: 123 ENLWPTLTDLDLYDNMISHIKGLEHLSKLTSLDFSFNNIKHIKNISHLVHLKDLYFVQNR 182
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQ 251
++ IE LE L L L L+ N + IENL S LE L + NKI+ I+
Sbjct: 183 IQKIEGLEGLKELRNLELAANKIRDIENLDSLIGLEELWLGKNKITEIK 231
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 24/131 (18%)
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
+L+ TNLE+L L +N+ISR L ENL LT L L +N
Sbjct: 99 HLERFTNLEKLCLRQNQISR-------------------LSFPENL--WPTLTDLDLYDN 137
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
++ I+ L KL +LD ++N I I+NI+HL L++ + N++ + LE K+
Sbjct: 138 MISHIKGLEHLSKLTSLDFSFNNIKHIKNISHLVHLKDLYFVQNRI---QKIEGLEGLKE 194
Query: 284 LQTIYLDRNPV 294
L+ + L N +
Sbjct: 195 LRNLELAANKI 205
>gi|887026|gb|AAA69527.1| internalin, partial [Listeria monocytogenes]
Length = 346
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 122/220 (55%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T + L L LE LD+S N++ +I
Sbjct: 94 LNRLELSSNTISDISALSGLTSLQQLS-FGNQVTDLXPLANLTTLERLDISXNKVSDISV 152
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L L N+++ I L LTNL +L L N+
Sbjct: 153 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 212
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 213 ISNLAPLXGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 272
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 273 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 312
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 124/248 (50%), Gaps = 26/248 (10%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL +L L SN IS
Sbjct: 47 LTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISD 106
Query: 140 IENVDHLKKLKVLELGD---------------------NKIRIIENLDGLTNLEELYLGK 178
I + L L+ L G+ NK+ I L LTNLE L
Sbjct: 107 ISALSGLTSLQQLSFGNQVTDLXPLANLTTLERLDISXNKVSDISVLAKLTNLESLIATN 166
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL
Sbjct: 167 NQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLXGLTKLT 226
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPV 294
L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV
Sbjct: 227 ELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPV 285
Query: 295 AQDPNYRR 302
+ +R
Sbjct: 286 SSLTKLQR 293
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 135 TTLERLDISXNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 194
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 195 GTLASLTNLTDLDLANNQISNLAPLXGLTKLTELKLGANQISNISPLAGLTALTNLELNE 254
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 255 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 314
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 315 WLSAGHNQISDLTPLANLTRITQLGLND 342
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L L+NL L
Sbjct: 16 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLSNLTGL 75
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T + L +
Sbjct: 76 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLXPLANL 134
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 135 TTLERLDISXNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 180
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 94/189 (49%), Gaps = 22/189 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 154 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 213
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 214 SNLAPLXGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 273
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 274 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 333
Query: 214 NLTQLYLSE 222
+TQL L++
Sbjct: 334 RITQLGLND 342
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N+
Sbjct: 3 LDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQ 59
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L L+NLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 60 IADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 119
Query: 263 WINDNQVSD 271
NQV+D
Sbjct: 120 SFG-NQVTD 127
>gi|428304289|ref|YP_007141114.1| hypothetical protein Cri9333_0667 [Crinalium epipsammum PCC 9333]
gi|428245824|gb|AFZ11604.1| leucine-rich repeat-containing protein [Crinalium epipsammum PCC
9333]
Length = 382
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 125/231 (54%), Gaps = 3/231 (1%)
Query: 66 LRW--NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
LR+ N I + + LT L L LY NQ++ ++ L +L NL L+LS N I ++K L
Sbjct: 138 LRFGENKISDLAPLRGLTNLTTLHLYRNQISDVKPLLSLRNLTSLELSSNPISDLKPLAG 197
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L L L L NKI+ ++ + L L LEL NKI ++ L GL NL +LYL NKIS
Sbjct: 198 LTKLTTLGLGGNKITDLKPLAGLANLTTLELSGNKISDLKPLAGLANLTKLYLSGNKISD 257
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ +A LTKL L L N++ ++ L L NLT L L N + ++ L + L L ++
Sbjct: 258 LKPVAGLTKLTKLWLDNNQISDVQPLAGLINLTFLSLDNNKINDVQPLANLTSLMGLGLS 317
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
NKIS + + LT+L +N N++SD + L N + + L NP+
Sbjct: 318 LNKISDVTPLRGLTKLNWLDLNLNKISDVTPLAGLT-NLNVNGLGLSGNPI 367
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 110/201 (54%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +E I L L EL +N+++ + L L NL L L N+I ++K L L NL L
Sbjct: 123 ITSLEGIQALRNLTELRFGENKISDLAPLRGLTNLTTLHLYRNQISDVKPLLSLRNLTSL 182
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L SN IS ++ + L KL L LG NKI ++ L GL NL L L NKIS + LA L
Sbjct: 183 ELSSNPISDLKPLAGLTKLTTLGLGGNKITDLKPLAGLANLTTLELSGNKISDLKPLAGL 242
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
L L L N++ ++ + LT LT+L+L N ++ ++ L L L + NKI+ +
Sbjct: 243 ANLTKLYLSGNKISDLKPVAGLTKLTKLWLDNNQISDVQPLAGLINLTFLSLDNNKINDV 302
Query: 251 QNIAHLTELQEFWINDNQVSD 271
Q +A+LT L ++ N++SD
Sbjct: 303 QPLANLTSLMGLGLSLNKISD 323
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 22/195 (11%)
Query: 77 IHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNK 136
++ L +K L L + ++T +E + L NL L N+I ++ L L NL L+L N+
Sbjct: 107 LNALQRVKHLNLINKEITSLEGIQALRNLTELRFGENKISDLAPLRGLTNLTTLHLYRNQ 166
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
IS ++ + L+ L LEL N I ++ L GLT L L LG NKI+ + LA L L L
Sbjct: 167 ISDVKPLLSLRNLTSLELSSNPISDLKPLAGLTKLTTLGLGGNKITDLKPLAGLANLTTL 226
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
L N++ ++ L L NLT+LYLS NKIS ++ +A L
Sbjct: 227 ELSGNKISDLKPLAGLANLTKLYLSG----------------------NKISDLKPVAGL 264
Query: 257 TELQEFWINDNQVSD 271
T+L + W+++NQ+SD
Sbjct: 265 TKLTKLWLDNNQISD 279
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ +L L N I ++ + LT L +L L +NQ++ ++ L LINL L L N+I +++
Sbjct: 245 LTKLYLSGNKISDLKPVAGLTKLTKLWLDNNQISDVQPLAGLINLTFLSLDNNKINDVQP 304
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
L +L +L L L NKIS + + L KL L+L NKI + L GLTNL LG
Sbjct: 305 LANLTSLMGLGLSLNKISDVTPLRGLTKLNWLDLNLNKISDVTPLAGLTNLNVNGLG 361
>gi|226292388|gb|EEH47808.1| protein phosphatase 1 regulatory subunit SDS22 [Paracoccidioides
brasiliensis Pb18]
Length = 234
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 84/125 (67%), Gaps = 1/125 (0%)
Query: 61 IERLLLRWNLIKKIENIHML-TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+E+L LR N I ++ L TL +L+LYDN ++ I+ L+ L L LD SFN I+ IK
Sbjct: 106 LEKLCLRQNQISRLSFPENLGPTLTDLDLYDNMISHIKGLEHLSKLTSLDFSFNNIKHIK 165
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ HL +L+ LY N+I KIE ++ LK+L+ LEL NKIR IENLD L LEEL+LGKN
Sbjct: 166 NISHLVHLKDLYFVQNRIQKIEGLEGLKELRNLELAANKIRDIENLDSLIALEELWLGKN 225
Query: 180 KISRI 184
KI+ I
Sbjct: 226 KITEI 230
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 80/133 (60%), Gaps = 1/133 (0%)
Query: 98 NLDTLINLEILDLSFNRIREIKGLDHLA-NLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
+L+ NLE L L N+I + ++L L L L N IS I+ ++HL KL L+
Sbjct: 99 HLERFTNLEKLCLRQNQISRLSFPENLGPTLTDLDLYDNMISHIKGLEHLSKLTSLDFSF 158
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
N I+ I+N+ L +L++LY +N+I +I+ L L +L L L N++R IENL++L L
Sbjct: 159 NNIKHIKNISHLVHLKDLYFVQNRIQKIEGLEGLKELRNLELAANKIRDIENLDSLIALE 218
Query: 217 QLYLSENGLTTIE 229
+L+L +N +T I+
Sbjct: 219 ELWLGKNKITEIK 231
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 108 LDLSFNRIREIKGL--DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENL 165
+DL RI + L + NLEKL L N+IS++ ENL
Sbjct: 85 IDLVHCRITSLPALHLERFTNLEKLCLRQNQISRLS-------------------FPENL 125
Query: 166 DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGL 225
G T L +L L N IS I L L+KL L N ++ I+N+ L +L LY +N +
Sbjct: 126 -GPT-LTDLDLYDNMISHIKGLEHLSKLTSLDFSFNNIKHIKNISHLVHLKDLYFVQNRI 183
Query: 226 TTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
IE L ++L L++A NKI I+N+ L L+E W+ N++++
Sbjct: 184 QKIEGLEGLKELRNLELAANKIRDIENLDSLIALEELWLGKNKITE 229
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 24/131 (18%)
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
+L+ TNLE+L L +N+ISR L ENL LT L L +N
Sbjct: 99 HLERFTNLEKLCLRQNQISR-------------------LSFPENLGP--TLTDLDLYDN 137
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
++ I+ L KL +LD ++N I I+NI+HL L++ + N++ + LE K+
Sbjct: 138 MISHIKGLEHLSKLTSLDFSFNNIKHIKNISHLVHLKDLYFVQNRIQ---KIEGLEGLKE 194
Query: 284 LQTIYLDRNPV 294
L+ + L N +
Sbjct: 195 LRNLELAANKI 205
>gi|348583852|ref|XP_003477686.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 1
[Cavia porcellus]
Length = 686
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 113/187 (60%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLINLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLTGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ HL LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQIAFVRDVDHLPSLQRLFLSFNNISSFDSVSCLADSTSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIENV+HL L+VL L N + ++NL GL +L EL L N+I
Sbjct: 175 ENLINLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLTGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ L L L L N + + +++ L + T L + +T N ++ E
Sbjct: 235 AFVRDVDHLPSLQRLFLSFNNISSFDSVSCLADSTSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMTQLRQL 301
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 114 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISN 173
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++L L VL+L N+I IEN++ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 174 LENLINLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLTGLDSLTELNLRHNQ 233
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L +L +L+LS N +++ ++ + +A T L +
Sbjct: 234 IAFVRDVDHLPSLQRLFLSFNNISSFDS-------------------VSCLADSTSLSDI 274
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 275 TFDGNPIAQESWYKHTVLQNMTQLRQLDMRR 305
>gi|428315480|ref|YP_007113362.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
gi|428239160|gb|AFZ04946.1| leucine-rich repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
Length = 471
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 120/205 (58%), Gaps = 1/205 (0%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I I + L+ L EL L +N+++ I L L NL L L+ NR+ +I L LANL
Sbjct: 256 NQISDISPLKHLSKLTELFLNNNKVSDITPLQFLTNLNTLWLNRNRVSDISTLKLLANLN 315
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
LYL +N+I I + +L LK ++L +NKI + LD + NL LYL N+I + +L
Sbjct: 316 TLYLINNQIYDISPLRYLTNLKQVDLTNNKIFDLRMLDSI-NLTSLYLTNNQIEDVSSLK 374
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
+ L +LSL N++ I L++LT LT+LYLSEN ++ + L S KL LD+A N+IS
Sbjct: 375 FMKTLKVLSLADNKISDISPLKSLTKLTELYLSENQISDVSPLKSLIKLTRLDLANNRIS 434
Query: 249 IIQNIAHLTELQEFWINDNQVSDWN 273
I + LT L E ++ N +++ N
Sbjct: 435 DISMLKPLTNLLELYLEGNPLTNRN 459
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 125/226 (55%), Gaps = 4/226 (1%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I I + LT L EL ++ NQ++ I L L NL +LDLS N +++IK L++L NL
Sbjct: 146 NRISDITPLKFLTNLTELSIWYNQVSNIYPLKNLTNLSVLDLSLNPLKDIKILENLRNLN 205
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
L L N++S I ++ +L L L LG N+I I L L L EL + +N+IS I L
Sbjct: 206 TLGLVDNQVSNINHLKYLTSLTHLSLGTNQISDISPLKYLNQLTELGISRNQISDISPLK 265
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
L+KL L L N++ I L+ LTNL L+L+ N ++ I L L TL + N+I
Sbjct: 266 HLSKLTELFLNNNKVSDITPLQFLTNLNTLWLNRNRVSDISTLKLLANLNTLYLINNQIY 325
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
I + +LT L++ + +N++ D ++ + L ++YL N +
Sbjct: 326 DISPLRYLTNLKQVDLTNNKIFDLRMLDSIN----LTSLYLTNNQI 367
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 96/163 (58%), Gaps = 1/163 (0%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N + I + +L L L L +NQ+ I L L NL+ +DL+ N+I +++ LD
Sbjct: 295 LWLNRNRVSDISTLKLLANLNTLYLINNQIYDISPLRYLTNLKQVDLTNNKIFDLRMLDS 354
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
+ NL LYL +N+I + ++ +K LKVL L DNKI I L LT L ELYL +N+IS
Sbjct: 355 I-NLTSLYLTNNQIEDVSSLKFMKTLKVLSLADNKISDISPLKSLTKLTELYLSENQISD 413
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
+ L SL KL L L NR+ I L+ LTNL +LYL N LT
Sbjct: 414 VSPLKSLIKLTRLDLANNRISDISMLKPLTNLLELYLEGNPLT 456
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/224 (38%), Positives = 126/224 (56%), Gaps = 3/224 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I I + LT L +L L N+++ I +L +L NL IL L NRI +I L L NL +L
Sbjct: 104 ITDISPLSSLTNLTKLSLSANKISDISSLSSLTNLTILQLDRNRISDITPLKFLTNLTEL 163
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+ N++S I + +L L VL+L N ++ I+ L+ L NL L L N++S I++L L
Sbjct: 164 SIWYNQVSNIYPLKNLTNLSVLDLSLNPLKDIKILENLRNLNTLGLVDNQVSNINHLKYL 223
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T L LSL N++ I L+ L LT+L +S N ++ I L KL L + NK+S I
Sbjct: 224 TSLTHLSLGTNQISDISPLKYLNQLTELGISRNQISDISPLKHLSKLTELFLNNNKVSDI 283
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
+ LT L W+N N+VSD +T+ +L N L T+YL N +
Sbjct: 284 TPLQFLTNLNTLWLNRNRVSDISTLKLLAN---LNTLYLINNQI 324
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 51/284 (17%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N +K I+ + L L L L DNQ++ I +L L +L L L N+I +I L +L
Sbjct: 187 LSLNPLKDIKILENLRNLNTLGLVDNQVSNINHLKYLTSLTHLSLGTNQISDISPLKYLN 246
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
L +L + N+IS I + HL KL L L +NK+ I L LTNL L+L +N++S I
Sbjct: 247 QLTELGISRNQISDISPLKHLSKLTELFLNNNKVSDITPLQFLTNLNTLWLNRNRVSDIS 306
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQ---------------------------- 217
L L LN L L N++ I L LTNL Q
Sbjct: 307 TLKLLANLNTLYLINNQIYDISPLRYLTNLKQVDLTNNKIFDLRMLDSINLTSLYLTNNQ 366
Query: 218 ---------------LYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
L L++N ++ I L S KL L ++ N+IS + + L +L
Sbjct: 367 IEDVSSLKFMKTLKVLSLADNKISDISPLKSLTKLTELYLSENQISDVSPLKSLIKLTRL 426
Query: 263 WINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD-----PNYR 301
+ +N++SD + + L N L +YL+ NP+ P++R
Sbjct: 427 DLANNRISDISMLKPLTN---LLELYLEGNPLTNRNCPLVPDFR 467
>gi|348583854|ref|XP_003477687.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 2
[Cavia porcellus]
Length = 752
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 113/187 (60%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 174 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 230
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 231 KNRIKKISNLENLINLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLTGLDSL 290
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ HL LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 291 TELNLRHNQIAFVRDVDHLPSLQRLFLSFNNISSFDSVSCLADSTSLSDITFDGNPIAQE 350
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 351 SWYKHTV 357
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 181 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 240
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIENV+HL L+VL L N + ++NL GL +L EL L N+I
Sbjct: 241 ENLINLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLTGLDSLTELNLRHNQI 300
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ L L L L N + + +++ L + T L + +T N ++ E
Sbjct: 301 AFVRDVDHLPSLQRLFLSFNNISSFDSVSCLADSTSL----SDITFDGNPIAQE------ 350
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 351 -SWYKHTVLQNMTQLRQL 367
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 180 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISN 239
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++L L VL+L N+I IEN++ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 240 LENLINLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLTGLDSLTELNLRHNQ 299
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L +L +L+LS N +++ ++ + +A T L +
Sbjct: 300 IAFVRDVDHLPSLQRLFLSFNNISSFDS-------------------VSCLADSTSLSDI 340
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 341 TFDGNPIAQESWYKHTVLQNMTQLRQLDMRR 371
>gi|348583856|ref|XP_003477688.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 3
[Cavia porcellus]
Length = 642
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 113/187 (60%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 64 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 120
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 121 KNRIKKISNLENLINLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLTGLDSL 180
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ HL LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 181 TELNLRHNQIAFVRDVDHLPSLQRLFLSFNNISSFDSVSCLADSTSLSDITFDGNPIAQE 240
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 241 SWYKHTV 247
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 71 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 130
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIENV+HL L+VL L N + ++NL GL +L EL L N+I
Sbjct: 131 ENLINLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLTGLDSLTELNLRHNQI 190
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ L L L L N + + +++ L + T L + +T N ++ E
Sbjct: 191 AFVRDVDHLPSLQRLFLSFNNISSFDSVSCLADSTSL----SDITFDGNPIAQE------ 240
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 241 -SWYKHTVLQNMTQLRQL 257
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 70 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISN 129
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++L L VL+L N+I IEN++ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 130 LENLINLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLTGLDSLTELNLRHNQ 189
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L +L +L+LS N +++ ++ + +A T L +
Sbjct: 190 IAFVRDVDHLPSLQRLFLSFNNISSFDS-------------------VSCLADSTSLSDI 230
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 231 TFDGNPIAQESWYKHTVLQNMTQLRQLDMRR 261
>gi|254417119|ref|ZP_05030865.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196176097|gb|EDX71115.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 414
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 140/272 (51%), Gaps = 26/272 (9%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L L N I + + LT L+ L+L NQ+T I L L NLE L+LS N+I +
Sbjct: 141 LEWLDLSRNQITNVNPLSELTNLEWLDLGHNQITNISPLSGLTNLEFLNLSHNQITNFRI 200
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ L NL+ + L +N+I+ I + L L+ + L +N+I + L LTNLE LY+G N+
Sbjct: 201 ISALINLKDIALNNNQITDIYPLAELTNLRRISLNNNQITTVRPLVQLTNLESLYIGNNQ 260
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ I L+ LT L L+L N++ I L LTNLT L LS N +T + L LE +
Sbjct: 261 ITDIRPLSQLTNLRQLALNHNQITDIRPLSQLTNLTGLALSHNQITDVRPLSQLTNLEWI 320
Query: 241 DVAYNKISII-------------------QNIAHLTELQEF-WIN--DNQVSDWNTVNVL 278
+ YN+I+ I N+ L +L+ WI+ NQ++D ++++ L
Sbjct: 321 HLNYNQITNITPLVNLNNLTGLDLHSNQVTNVTPLVQLKNLKWIDLRFNQITDISSLSGL 380
Query: 279 ENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPW 310
N L +YL+ NP+ P +C W
Sbjct: 381 TN---LMRLYLEGNPII-PPTCPSTYSYICFW 408
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 128/235 (54%), Gaps = 3/235 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L L NLI + + LT LK+++L NQ+T + L L NLE LDLS N+I +
Sbjct: 97 LRTLYLGSNLISDVSPLVELTNLKKVDLSHNQITNVNPLSGLTNLEWLDLSRNQITNVNP 156
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L L N+I+ I + L L+ L L N+I + L NL+++ L N+
Sbjct: 157 LSELTNLEWLDLGHNQITNISPLSGLTNLEFLNLSHNQITNFRIISALINLKDIALNNNQ 216
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ I LA LT L +SL N++ T+ L LTNL LY+ N +T I L L L
Sbjct: 217 ITDIYPLAELTNLRRISLNNNQITTVRPLVQLTNLESLYIGNNQITDIRPLSQLTNLRQL 276
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+ +N+I+ I+ ++ LT L ++ NQ++D ++ L N L+ I+L+ N +
Sbjct: 277 ALNHNQITDIRPLSQLTNLTGLALSHNQITDVRPLSQLTN---LEWIHLNYNQIT 328
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 120/210 (57%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I I + LT L+ L L N ++ + L L NL+ +DLS N+I + L L NLE L
Sbjct: 85 ITDIRPLSGLTNLRTLYLGSNLISDVSPLVELTNLKKVDLSHNQITNVNPLSGLTNLEWL 144
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+I+ + + L L+ L+LG N+I I L GLTNLE L L N+I+ +++L
Sbjct: 145 DLSRNQITNVNPLSELTNLEWLDLGHNQITNISPLSGLTNLEFLNLSHNQITNFRIISAL 204
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
L ++L N++ I L LTNL ++ L+ N +TT+ L+ LE+L + N+I+ I
Sbjct: 205 INLKDIALNNNQITDIYPLAELTNLRRISLNNNQITTVRPLVQLTNLESLYIGNNQITDI 264
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ ++ LT L++ +N NQ++D ++ L N
Sbjct: 265 RPLSQLTNLRQLALNHNQITDIRPLSQLTN 294
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 111/207 (53%)
Query: 78 HMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKI 137
H L++ +L L +T I L L NL L L N I ++ L L NL+K+ L N+I
Sbjct: 70 HNLSSRTQLNLRIQNITDIRPLSGLTNLRTLYLGSNLISDVSPLVELTNLKKVDLSHNQI 129
Query: 138 SKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILS 197
+ + + L L+ L+L N+I + L LTNLE L LG N+I+ I L+ LT L L+
Sbjct: 130 TNVNPLSGLTNLEWLDLSRNQITNVNPLSELTNLEWLDLGHNQITNISPLSGLTNLEFLN 189
Query: 198 LQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLT 257
L N++ + AL NL + L+ N +T I L L + + N+I+ ++ + LT
Sbjct: 190 LSHNQITNFRIISALINLKDIALNNNQITDIYPLAELTNLRRISLNNNQITTVRPLVQLT 249
Query: 258 ELQEFWINDNQVSDWNTVNVLENNKQL 284
L+ +I +NQ++D ++ L N +QL
Sbjct: 250 NLESLYIGNNQITDIRPLSQLTNLRQL 276
>gi|38047655|gb|AAR09730.1| similar to Drosophila melanogaster sds22, partial [Drosophila
yakuba]
Length = 145
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 67/83 (80%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IERL LRWNLIKKIEN+ L TL ELELYDNQ+T IENLD L LE+LD+SFNR+ +I+
Sbjct: 63 IERLFLRWNLIKKIENLSSLKTLIELELYDNQITKIENLDDLTELEVLDISFNRLTKIEN 122
Query: 121 LDHLANLEKLYLCSNKISKIENV 143
LD L LEK+Y SN+I++IEN+
Sbjct: 123 LDKLVKLEKVYFVSNRITQIENL 145
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 65/102 (63%)
Query: 108 LDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG 167
LDL+ RI +++ + L +E+L+L N I KIEN+ LK L LEL DN+I IENLD
Sbjct: 44 LDLNHRRIEKLENFEPLTRIERLFLRWNLIKKIENLSSLKTLIELELYDNQITKIENLDD 103
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
LT LE L + N++++I+NL L KL + NR+ IENL
Sbjct: 104 LTELEVLDISFNRLTKIENLDKLVKLEKVYFVSNRITQIENL 145
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 69/103 (66%)
Query: 85 ELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVD 144
EL+L ++ +EN + L +E L L +N I++I+ L L L +L L N+I+KIEN+D
Sbjct: 43 ELDLNHRRIEKLENFEPLTRIERLFLRWNLIKKIENLSSLKTLIELELYDNQITKIENLD 102
Query: 145 HLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNL 187
L +L+VL++ N++ IENLD L LE++Y N+I++I+NL
Sbjct: 103 DLTELEVLDISFNRLTKIENLDKLVKLEKVYFVSNRITQIENL 145
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 64/103 (62%)
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L L +I K+EN + L +++ L L N I+ IENL L L EL L N+I++I+NL
Sbjct: 43 ELDLNHRRIEKLENFEPLTRIERLFLRWNLIKKIENLSSLKTLIELELYDNQITKIENLD 102
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
LT+L +L + NRL IENL+ L L ++Y N +T IENL
Sbjct: 103 DLTELEVLDISFNRLTKIENLDKLVKLEKVYFVSNRITQIENL 145
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 63/98 (64%)
Query: 173 ELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLL 232
EL L +I +++N LT++ L L+ N ++ IENL +L L +L L +N +T IENL
Sbjct: 43 ELDLNHRRIEKLENFEPLTRIERLFLRWNLIKKIENLSSLKTLIELELYDNQITKIENLD 102
Query: 233 SNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
+LE LD+++N+++ I+N+ L +L++ + N+++
Sbjct: 103 DLTELEVLDISFNRLTKIENLDKLVKLEKVYFVSNRIT 140
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 62/102 (60%)
Query: 152 LELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEA 211
L+L +I +EN + LT +E L+L N I +I+NL+SL L L L N++ IENL+
Sbjct: 44 LDLNHRRIEKLENFEPLTRIERLFLRWNLIKKIENLSSLKTLIELELYDNQITKIENLDD 103
Query: 212 LTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNI 253
LT L L +S N LT IENL KLE + N+I+ I+N+
Sbjct: 104 LTELEVLDISFNRLTKIENLDKLVKLEKVYFVSNRITQIENL 145
>gi|2582352|gb|AAB82534.1| PprA [Dictyostelium discoideum]
Length = 154
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 91/152 (59%), Gaps = 3/152 (1%)
Query: 170 NLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTI--ENLEALTNLTQLYLSENGLTT 227
N+E L+LG+NKI+ I + L+ L ILSLQ NRL I + L L L +LYLS NG+T
Sbjct: 1 NIETLWLGRNKITEIKGINHLSHLRILSLQSNRLTEIGVKGLVGLNCLEELYLSHNGITD 60
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
I+ L S ++L TLD++ NKI + + L +L E W NDN V + + + K ++ +
Sbjct: 61 IDGLQSLKQLRTLDISANKIKTLVGLNELPDLDEIWCNDNLVDSMDNIEQ-QVTKSIKCL 119
Query: 288 YLDRNPVAQDPNYRRKIKLVCPWIVQIDATLA 319
Y +RNPVA YRR + P + Q+DAT+
Sbjct: 120 YFERNPVATHVQYRRMFINMFPQLKQLDATMV 151
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREI--KGLDHLANLEKLYLCSNKISKI 140
++ L L N++T I+ ++ L +L IL L NR+ EI KGL L LE+LYL N I+ I
Sbjct: 2 IETLWLGRNKITEIKGINHLSHLRILSLQSNRLTEIGVKGLVGLNCLEELYLSHNGITDI 61
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNL 187
+ + LK+L+ L++ NKI+ + L+ L +L+E++ N + +DN+
Sbjct: 62 DGLQSLKQLRTLDISANKIKTLVGLNELPDLDEIWCNDNLVDSMDNI 108
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 74 IENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLC 133
++ + L L+EL L N +T I+ L +L L LD+S N+I+ + GL+ L +L++++
Sbjct: 39 VKGLVGLNCLEELYLSHNGITDIDGLQSLKQLRTLDISANKIKTLVGLNELPDLDEIWCN 98
Query: 134 SNKISKIENVDH--LKKLKVLELGDNKI 159
N + ++N++ K +K L N +
Sbjct: 99 DNLVDSMDNIEQQVTKSIKCLYFERNPV 126
>gi|334121440|ref|ZP_08495509.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
gi|333455058|gb|EGK83722.1| leucine-rich repeat-containing protein [Microcoleus vaginatus
FGP-2]
Length = 336
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 118/220 (53%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+L N I + + LT LK L + NQ++ I L +LINL L L N+I +I
Sbjct: 69 LTNLILGSNRISDLAPLQSLTNLKTLIMDVNQISDISPLSSLINLSQLVLDTNQISDISP 128
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL L L NKIS I + L L L L +N+I + L LT L+ LYL NK
Sbjct: 129 LAGLTNLTALVLFDNKISDITPLQALTNLNALILYNNQISDLAPLTNLTALDTLYLYNNK 188
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS I L+SL L L L N++ I L +LTNL +L L +N ++ I L S L L
Sbjct: 189 ISDITRLSSLKNLTTLFLFGNKISDITPLASLTNLNKLVLFQNQISDISPLTSLTNLIEL 248
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
++ N+IS I + LT L E ++ +N +SD + + L N
Sbjct: 249 NLGNNQISDISPLKSLTNLTELYLFNNPISDTSALQALNN 288
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 119/225 (52%), Gaps = 3/225 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I I + T L L L N+++ + L +L NL+ L + N+I +I L L NL +L
Sbjct: 57 ITDISPLSSFTKLTNLILGSNRISDLAPLQSLTNLKTLIMDVNQISDISPLSSLINLSQL 116
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L +N+IS I + L L L L DNKI I L LTNL L L N+IS + L +L
Sbjct: 117 VLDTNQISDISPLAGLTNLTALVLFDNKISDITPLQALTNLNALILYNNQISDLAPLTNL 176
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T L+ L L N++ I L +L NLT L+L N ++ I L S L L + N+IS I
Sbjct: 177 TALDTLYLYNNKISDITRLSSLKNLTTLFLFGNKISDITPLASLTNLNKLVLFQNQISDI 236
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+ LT L E + +NQ+SD + + L N L +YL NP++
Sbjct: 237 SPLTSLTNLIELNLGNNQISDISPLKSLTN---LTELYLFNNPIS 278
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 118/214 (55%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
S + + +L+L N I I + LT L L L+DN+++ I L L NL L L N+I
Sbjct: 108 SSLINLSQLVLDTNQISDISPLAGLTNLTALVLFDNKISDITPLQALTNLNALILYNNQI 167
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++ L +L L+ LYL +NKIS I + LK L L L NKI I L LTNL +L
Sbjct: 168 SDLAPLTNLTALDTLYLYNNKISDITRLSSLKNLTTLFLFGNKISDITPLASLTNLNKLV 227
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
L +N+IS I L SLT L L+L N++ I L++LTNLT+LYL N ++ L +
Sbjct: 228 LFQNQISDISPLTSLTNLIELNLGNNQISDISPLKSLTNLTELYLFNNPISDTSALQALN 287
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQV 269
L LD+ N+IS I ++ L +L + N +
Sbjct: 288 NLFLLDLYNNQISDISSLQSLQKLTTLDLRGNPI 321
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 125/249 (50%), Gaps = 12/249 (4%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L++ N I I + L L +L L NQ++ I L L NL L L N+I +I
Sbjct: 91 LKTLIMDVNQISDISPLSSLINLSQLVLDTNQISDISPLAGLTNLTALVLFDNKISDITP 150
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL L L +N+IS + + +L L L L +NKI I L L NL L+L NK
Sbjct: 151 LQALTNLNALILYNNQISDLAPLTNLTALDTLYLYNNKISDITRLSSLKNLTTLFLFGNK 210
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS I LASLT LN L L N++ I L +LTNL +L L N ++ I L S L L
Sbjct: 211 ISDITPLASLTNLNKLVLFQNQISDISPLTSLTNLIELNLGNNQISDISPLKSLTNLTEL 270
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
+ N IS + L L + +NQ+SD +++ L+ +L T+ L NP+
Sbjct: 271 YLFNNPISDTSALQALNNLFLLDLYNNQISDISSLQSLQ---KLTTLDLRGNPIVNK--- 324
Query: 301 RRKIKLVCP 309
+CP
Sbjct: 325 ------ICP 327
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 106/202 (52%)
Query: 79 MLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKIS 138
+L+ EL L + Q+T I L + L L L NRI ++ L L NL+ L + N+IS
Sbjct: 43 LLSNTTELNLKNLQITDISPLSSFTKLTNLILGSNRISDLAPLQSLTNLKTLIMDVNQIS 102
Query: 139 KIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSL 198
I + L L L L N+I I L GLTNL L L NKIS I L +LT LN L L
Sbjct: 103 DISPLSSLINLSQLVLDTNQISDISPLAGLTNLTALVLFDNKISDITPLQALTNLNALIL 162
Query: 199 QCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ + L LT L LYL N ++ I L S + L TL + NKIS I +A LT
Sbjct: 163 YNNQISDLAPLTNLTALDTLYLYNNKISDITRLSSLKNLTTLFLFGNKISDITPLASLTN 222
Query: 259 LQEFWINDNQVSDWNTVNVLEN 280
L + + NQ+SD + + L N
Sbjct: 223 LNKLVLFQNQISDISPLTSLTN 244
>gi|887868|gb|AAA69533.1| internalin, partial [Listeria monocytogenes]
Length = 344
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 135/243 (55%), Gaps = 6/243 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 51 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 110
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 111 LTNLQQLSL-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 169
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT + LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 170 ITPLGILTNWDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLPGLTKLTELKLG 229
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQDPN 299
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 230 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSSLTK 288
Query: 300 YRR 302
+R
Sbjct: 289 LQR 291
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 118/233 (50%), Gaps = 23/233 (9%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L L NQ+T ++ L L LE LD+S N++ +I
Sbjct: 92 LNRLELSSNTISDISALSGLTNLQQLSL-GNQVTDLKPLANLTTLERLDISSNKVSDISV 150
Query: 121 LDHLANLEKLYLCSNKISKIE-------------NVDHLKKLKVL---------ELGDNK 158
L L NLE L +N+IS I N + LK + L +L +N+
Sbjct: 151 LAKLTNLESLIATNNQISDITPLGILTNWDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 210
Query: 159 IRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
I + L GLT L EL LG N+IS I LA LT L L L N+L I + L NLT L
Sbjct: 211 ISNLAPLPGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 270
Query: 219 YLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L N ++ I + S KL+ L NK+S + ++A+LT + NQ+SD
Sbjct: 271 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISD 323
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 14 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 73
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL L N +T ++ L +
Sbjct: 74 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSLG-NQVTDLKPLANL 132
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 133 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 178
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 112/208 (53%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L N + L L+ N++++I
Sbjct: 133 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNWDELSLNGNQLKDI 192
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 193 GTLASLTNLTDLDLANNQISNLAPLPGLTKLTELKLGANQISNISPLAGLTALTNLELNE 252
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 253 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 312
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + + D
Sbjct: 313 WLSAGHNQISDLTPLANLTRITQLGLXD 340
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N+
Sbjct: 1 LDQVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQ 57
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 58 IADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQL 117
Query: 263 WINDNQVSD 271
+ NQV+D
Sbjct: 118 SLG-NQVTD 125
>gi|427735495|ref|YP_007055039.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
gi|427370536|gb|AFY54492.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
Length = 396
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 121/215 (56%), Gaps = 3/215 (1%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L++L EL L Q++ ++ L L NL +DL N+I ++K L +L NL L + NKIS
Sbjct: 70 LSSLTELRLLTKQISDLKPLSGLTNLTNIDLWGNKISDVKPLVNLTNLTNLNIGGNKISD 129
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
++ + L L L+LG NKI + L LTNL L + N+IS I++L +L L L +
Sbjct: 130 VKPLASLTNLTNLDLGGNKISDVTPLASLTNLIRLDVYSNQISDINSLENLNNLTFLRVG 189
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
NR+ ++ TNLT+L+L EN ++ + L S L L++ N+IS I+ IA L L
Sbjct: 190 SNRIVDVKQFANFTNLTELWLEENQISDVRPLSSLNNLTKLNLMSNQISDIKPIASLNSL 249
Query: 260 QEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
++ NQ+SD + L N L T+ LDRN +
Sbjct: 250 NSLDLDKNQISD---IEALSNLTNLTTLGLDRNQI 281
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 126/214 (58%), Gaps = 1/214 (0%)
Query: 68 W-NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLAN 126
W N I ++ + LT L L + N+++ ++ L +L NL LDL N+I ++ L L N
Sbjct: 101 WGNKISDVKPLVNLTNLTNLNIGGNKISDVKPLASLTNLTNLDLGGNKISDVTPLASLTN 160
Query: 127 LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDN 186
L +L + SN+IS I ++++L L L +G N+I ++ TNL EL+L +N+IS +
Sbjct: 161 LIRLDVYSNQISDINSLENLNNLTFLRVGSNRIVDVKQFANFTNLTELWLEENQISDVRP 220
Query: 187 LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK 246
L+SL L L+L N++ I+ + +L +L L L +N ++ IE L + L TL + N+
Sbjct: 221 LSSLNNLTKLNLMSNQISDIKPIASLNSLNSLDLDKNQISDIEALSNLTNLTTLGLDRNQ 280
Query: 247 ISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
I I+ +++LT+L+ ++ NQ+SD ++ L N
Sbjct: 281 IINIKPLSNLTKLRWLFLRQNQISDIKPLSSLTN 314
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 121/226 (53%), Gaps = 22/226 (9%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK------ 119
L N I + + LT L L++Y NQ++ I +L+ L NL L + NRI ++K
Sbjct: 144 LGGNKISDVTPLASLTNLIRLDVYSNQISDINSLENLNNLTFLRVGSNRIVDVKQFANFT 203
Query: 120 ----------------GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE 163
L L NL KL L SN+IS I+ + L L L+L N+I IE
Sbjct: 204 NLTELWLEENQISDVRPLSSLNNLTKLNLMSNQISDIKPIASLNSLNSLDLDKNQISDIE 263
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
L LTNL L L +N+I I L++LTKL L L+ N++ I+ L +LTNL L L N
Sbjct: 264 ALSNLTNLTTLGLDRNQIINIKPLSNLTKLRWLFLRQNQISDIKPLSSLTNLRWLELKSN 323
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQV 269
+ ++ L + KL L+++ N+I+ +Q++A+LT L F + +N +
Sbjct: 324 KIRDVKPLTNLAKLRNLNLSSNQITNVQSLANLTNLVNFNVEENPI 369
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 138/253 (54%), Gaps = 5/253 (1%)
Query: 43 EAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTL 102
EA T + + + + RLL + I ++ + LT L ++L+ N+++ ++ L L
Sbjct: 57 EAGTQDCHQANRKLSSLTELRLLTKQ--ISDLKPLSGLTNLTNIDLWGNKISDVKPLVNL 114
Query: 103 INLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII 162
NL L++ N+I ++K L L NL L L NKIS + + L L L++ N+I I
Sbjct: 115 TNLTNLNIGGNKISDVKPLASLTNLTNLDLGGNKISDVTPLASLTNLIRLDVYSNQISDI 174
Query: 163 ENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSE 222
+L+ L NL L +G N+I + A+ T L L L+ N++ + L +L NLT+L L
Sbjct: 175 NSLENLNNLTFLRVGSNRIVDVKQFANFTNLTELWLEENQISDVRPLSSLNNLTKLNLMS 234
Query: 223 NGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNK 282
N ++ I+ + S L +LD+ N+IS I+ +++LT L ++ NQ+ + + L N
Sbjct: 235 NQISDIKPIASLNSLNSLDLDKNQISDIEALSNLTNLTTLGLDRNQIIN---IKPLSNLT 291
Query: 283 QLQTIYLDRNPVA 295
+L+ ++L +N ++
Sbjct: 292 KLRWLFLRQNQIS 304
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 91/164 (55%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I + + L L +L L NQ++ I+ + +L +L LDL N+I +I+ L +
Sbjct: 208 LWLEENQISDVRPLSSLNNLTKLNLMSNQISDIKPIASLNSLNSLDLDKNQISDIEALSN 267
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL L L N+I I+ + +L KL+ L L N+I I+ L LTNL L L NKI
Sbjct: 268 LTNLTTLGLDRNQIINIKPLSNLTKLRWLFLRQNQISDIKPLSSLTNLRWLELKSNKIRD 327
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
+ L +L KL L+L N++ +++L LTNL + EN + T
Sbjct: 328 VKPLTNLAKLRNLNLSSNQITNVQSLANLTNLVNFNVEENPINT 371
>gi|255523038|ref|ZP_05390010.1| leucine-rich repeat protein [Clostridium carboxidivorans P7]
gi|255513153|gb|EET89421.1| leucine-rich repeat protein [Clostridium carboxidivorans P7]
Length = 421
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 112/208 (53%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V ++ L L + I+ I + LT LKEL LYD+ +T I L L NLE L+L N+I +I
Sbjct: 190 VNLQSLTLTYCQIEDISPLKGLTNLKELMLYDDNITDISPLKGLTNLEFLELYGNQITDI 249
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L+ L L+ + L +NKI I + L L+ L L NKI I +L LTNL L L
Sbjct: 250 PSLEGLTKLKDIDLGNNKIHDITLLRELSNLQELNLVYNKITDISSLKELTNLNSLDLDN 309
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N IS I L L+ L LSL N++ I +L+ LTNL L L +N +T I L L
Sbjct: 310 NNISDISPLEKLSNLKSLSLGSNKITDISSLKGLTNLNSLVLDDNNITDISPLKGLTNLN 369
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L++ NKIS I + LT L W+ D
Sbjct: 370 FLNLGSNKISDISPLEGLTNLSTLWLKD 397
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 126/241 (52%), Gaps = 5/241 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N IK I I L L+ L L Q+ I L L NL+ L L + I +I L L NLE
Sbjct: 178 NTIKYINGIEGLVNLQSLTLTYCQIEDISPLKGLTNLKELMLYDDNITDISPLKGLTNLE 237
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
L L N+I+ I +++ L KLK ++LG+NKI I L L+NL+EL L NKI+ I +L
Sbjct: 238 FLELYGNQITDIPSLEGLTKLKDIDLGNNKIHDITLLRELSNLQELNLVYNKITDISSLK 297
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT LN L L N + I LE L+NL L L N +T I +L L +L + N I+
Sbjct: 298 ELTNLNSLDLDNNNISDISPLEKLSNLKSLSLGSNKITDISSLKGLTNLNSLVLDDNNIT 357
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVC 308
I + LT L + N++SD ++ LE L T++L P + Y+ K+K
Sbjct: 358 DISPLKGLTNLNFLNLGSNKISD---ISPLEGLTNLSTLWLKDTPTNEV--YKEKLKKYL 412
Query: 309 P 309
P
Sbjct: 413 P 413
>gi|422414916|ref|ZP_16491873.1| internalin A, partial [Listeria innocua FSL J1-023]
gi|313625062|gb|EFR94940.1| internalin A [Listeria innocua FSL J1-023]
Length = 676
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 116/211 (54%), Gaps = 1/211 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I
Sbjct: 166 LNRLELSGNTISDISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVTDISV 224
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE+L +N+IS I + L L L L N+++ I L LTNL L L N+
Sbjct: 225 LSKLTNLERLIATNNQISDITPLGILINLDELSLNGNQLKDIGTLVSLTNLTNLDLANNQ 284
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L LTKL L L N++ I L LT LT L L EN L I + + + L L
Sbjct: 285 ISNLAPLTDLTKLTELKLGANQISNISPLAGLTALTNLELHENQLEDISPISNLKNLTYL 344
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ N IS I ++ LT+LQ + +N+VSD
Sbjct: 345 TLYINNISDISPVSSLTKLQRLFFYNNKVSD 375
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L LINL+ L L+ N++++I
Sbjct: 207 TTLERLDISSNKVTDISVLSKLTNLERLIATNNQISDITPLGILINLDELSLNGNQLKDI 266
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 267 GTLVSLTNLTNLDLANNQISNLAPLTDLTKLTELKLGANQISNISPLAGLTALTNLELHE 326
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 327 NQLEDISPISNLKNLTYLTLYINNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 386
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L N+IS + +A+LT + + +ND
Sbjct: 387 WLSAGNNQISDLTPLANLTRITQLGLND 414
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 125/253 (49%), Gaps = 26/253 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I + LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL
Sbjct: 108 NQLTDITPLKDLTKLVDIVMNNNQIADISPLANLTNLTGLTLFTNQITDIDPLKNLTNLN 167
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGD---------------------NKIRIIENLDG 167
+L L N IS I + L L+ L G+ NK+ I L
Sbjct: 168 RLELSGNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVTDISVLSK 227
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNLE L N+IS I L L L+ LSL N+L+ I L +LTNLT L L+ N ++
Sbjct: 228 LTNLERLIATNNQISDITPLGILINLDELSLNGNQLKDIGTLVSLTNLTNLDLANNQISN 287
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ L KL L + N+IS I +A LT L +++NQ+ D + ++ L+N L T+
Sbjct: 288 LAPLTDLTKLTELKLGANQISNISPLAGLTALTNLELHENQLEDISPISNLKNLTYL-TL 346
Query: 288 YL----DRNPVAQ 296
Y+ D +PV+
Sbjct: 347 YINNISDISPVSS 359
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 114/223 (51%), Gaps = 23/223 (10%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I + L L ++ +NQLT I L L L + ++ N+I +I L +L NL L
Sbjct: 88 IKSINGVEYLNNLTQINFSNNQLTDITPLKDLTKLVDIVMNNNQIADISPLANLTNLTGL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L +N+I+ I+ + +L L LEL N I I L GLT+L++L G N+++ + LA+L
Sbjct: 148 TLFTNQITDIDPLKNLTNLNRLELSGNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLY--------------------LSENG--LTTI 228
T L L + N++ I L LTNL +L LS NG L I
Sbjct: 207 TTLERLDISSNKVTDISVLSKLTNLERLIATNNQISDITPLGILINLDELSLNGNQLKDI 266
Query: 229 ENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L+S L LD+A N+IS + + LT+L E + NQ+S+
Sbjct: 267 GTLVSLTNLTNLDLANNQISNLAPLTDLTKLTELKLGANQISN 309
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 94/166 (56%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I G+++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 88 IKSINGVEYLNNLTQINFSNNQLTDITPLKDLTKLVDIVMNNNQIADISPLANLTNLTGL 147
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LT+L QL N +T ++ L +
Sbjct: 148 TLFTNQITDIDPLKNLTNLNRLELSGNTISDISALSGLTSLQQLSFG-NQVTDLKPLANL 206
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK++ I ++ LT L+ +NQ+SD + +L N
Sbjct: 207 TTLERLDISSNKVTDISVLSKLTNLERLIATNNQISDITPLGILIN 252
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK +ERL+ N I I + +L L EL L NQL I L +L NL LDL+ N+I
Sbjct: 226 SKLTNLERLIATNNQISDITPLGILINLDELSLNGNQLKDIGTLVSLTNLTNLDLANNQI 285
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 286 SNLAPLTDLTKLTELKLGANQISNISPLAGLTALTNLELHENQLEDISPISNLKNLTYLT 345
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 346 LYINNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGNNQISDLTPLANLT 405
Query: 214 NLTQLYLSENGLT 226
+TQL L++ T
Sbjct: 406 RITQLGLNDQAWT 418
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++D + L+ LG I+ I ++ L NL ++ N+++ I L LTKL + + N
Sbjct: 74 DLDQVTTLQADRLG---IKSINGVEYLNNLTQINFSNNQLTDITPLKDLTKLVDIVMNNN 130
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ I L LTNLT L L N +T I+ L + L L+++ N IS I ++ LT LQ+
Sbjct: 131 QIADISPLANLTNLTGLTLFTNQITDIDPLKNLTNLNRLELSGNTISDISALSGLTSLQQ 190
Query: 262 FWINDNQVSD 271
NQV+D
Sbjct: 191 LSFG-NQVTD 199
>gi|328950290|ref|YP_004367625.1| hypothetical protein Marky_0765 [Marinithermus hydrothermalis DSM
14884]
gi|328450614|gb|AEB11515.1| hypothetical protein Marky_0765 [Marinithermus hydrothermalis DSM
14884]
Length = 462
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 125/238 (52%), Gaps = 25/238 (10%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L L+ L + ++ +E L+ +NL LDL NRI ++ L L LE+L L SN+I+
Sbjct: 61 LARLEALNAAERRIQSLEGLEHAVNLVTLDLKGNRIADLTPLAELRYLEELDLVSNRITD 120
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG---------------------- 177
+ + +L +LK L LG+N+++ +E L GLT L EL +G
Sbjct: 121 LAPLANLTRLKRLHLGNNQVQSLEPLAGLTQLTELRIGNNRVADLAPLADLGRLAVLVAW 180
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
+N ++ + LA+LT++ +LSL NR+ + L L L L+LSEN + + L +L
Sbjct: 181 RNAVTDLQPLANLTRMRVLSLASNRVTDLTPLAELAQLDTLFLSENQIADLAPLAGLTQL 240
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+ L + +N+I+ + +A L EL E ++ NQ++D + L N LQ + N +A
Sbjct: 241 KVLSLDFNRITHLDPLARLVELTELGLDANQIADLTPLAGLTN---LQVLSASENRIA 295
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 122/232 (52%), Gaps = 3/232 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L L N I + + LT LK L L +NQ+ +E L L L L + NR+ ++
Sbjct: 108 LEELDLVSNRITDLAPLANLTRLKRLHLGNNQVQSLEPLAGLTQLTELRIGNNRVADLAP 167
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L N ++ ++ + +L +++VL L N++ + L L L+ L+L +N+
Sbjct: 168 LADLGRLAVLVAWRNAVTDLQPLANLTRMRVLSLASNRVTDLTPLAELAQLDTLFLSENQ 227
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + LA LT+L +LSL NR+ ++ L L LT+L L N + + L L+ L
Sbjct: 228 IADLAPLAGLTQLKVLSLDFNRITHLDPLARLVELTELGLDANQIADLTPLAGLTNLQVL 287
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
+ N+I+ + + L L++ +N N++ D ++ LE K L+ + L+ N
Sbjct: 288 SASENRIADLTPLGGLVRLEQLGLNFNRIRD---ISALEGLKALKVLELEGN 336
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 114/218 (52%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + + + L L L + N +T ++ L L + +L L+ NR+ ++ L LA L+
Sbjct: 160 NRVADLAPLADLGRLAVLVAWRNAVTDLQPLANLTRMRVLSLASNRVTDLTPLAELAQLD 219
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
L+L N+I+ + + L +LKVL L N+I ++ L L L EL L N+I+ + LA
Sbjct: 220 TLFLSENQIADLAPLAGLTQLKVLSLDFNRITHLDPLARLVELTELGLDANQIADLTPLA 279
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
LT L +LS NR+ + L L L QL L+ N + I L + L+ L++ N+I
Sbjct: 280 GLTNLQVLSASENRIADLTPLGGLVRLEQLGLNFNRIRDISALEGLKALKVLELEGNQIV 339
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQT 286
+ +A LTEL+ + N+++D + L N QL+
Sbjct: 340 NLAPLAGLTELRVLVLGQNRIADLTPLGALVNLVQLEV 377
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 98/183 (53%), Gaps = 3/183 (1%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L +N I ++ + L L EL L NQ+ + L L NL++L S NRI ++ L L
Sbjct: 245 LDFNRITHLDPLARLVELTELGLDANQIADLTPLAGLTNLQVLSASENRIADLTPLGGLV 304
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
LE+L L N+I I ++ LK LKVLEL N+I + L GLT L L LG+N+I+ +
Sbjct: 305 RLEQLGLNFNRIRDISALEGLKALKVLELEGNQIVNLAPLAGLTELRVLVLGQNRIADLT 364
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL---ETLDV 242
L +L L L + N + + L L NL ++ L N +T + L++N L E +DV
Sbjct: 365 PLGALVNLVQLEVSRNEITDLGALAQLENLVRVSLVRNRVTNLGPLVANAGLQGGEVIDV 424
Query: 243 AYN 245
N
Sbjct: 425 RLN 427
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 119/232 (51%), Gaps = 4/232 (1%)
Query: 64 LLLRW-NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLD 122
+L+ W N + ++ + LT ++ L L N++T + L L L+ L LS N+I ++ L
Sbjct: 176 VLVAWRNAVTDLQPLANLTRMRVLSLASNRVTDLTPLAELAQLDTLFLSENQIADLAPLA 235
Query: 123 HLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKIS 182
L L+ L L N+I+ ++ + L +L L L N+I + L GLTNL+ L +N+I+
Sbjct: 236 GLTQLKVLSLDFNRITHLDPLARLVELTELGLDANQIADLTPLAGLTNLQVLSASENRIA 295
Query: 183 RIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDV 242
+ L L +L L L NR+R I LE L L L L N + + L +L L +
Sbjct: 296 DLTPLGGLVRLEQLGLNFNRIRDISALEGLKALKVLELEGNQIVNLAPLAGLTELRVLVL 355
Query: 243 AYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
N+I+ + + L L + ++ N+++D + LEN L + L RN V
Sbjct: 356 GQNRIADLTPLGALVNLVQLEVSRNEITDLGALAQLEN---LVRVSLVRNRV 404
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 101/188 (53%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N I + + LT LK L L N++T ++ L L+ L L L N+I ++
Sbjct: 218 LDTLFLSENQIADLAPLAGLTQLKVLSLDFNRITHLDPLARLVELTELGLDANQIADLTP 277
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L N+I+ + + L +L+ L L N+IR I L+GL L+ L L N+
Sbjct: 278 LAGLTNLQVLSASENRIADLTPLGGLVRLEQLGLNFNRIRDISALEGLKALKVLELEGNQ 337
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I + LA LT+L +L L NR+ + L AL NL QL +S N +T + L E L +
Sbjct: 338 IVNLAPLAGLTELRVLVLGQNRIADLTPLGALVNLVQLEVSRNEITDLGALAQLENLVRV 397
Query: 241 DVAYNKIS 248
+ N+++
Sbjct: 398 SLVRNRVT 405
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 105/210 (50%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N + + + L L L L +NQ+ + L L L++L L FNRI + L L
Sbjct: 201 LASNRVTDLTPLAELAQLDTLFLSENQIADLAPLAGLTQLKVLSLDFNRITHLDPLARLV 260
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
L +L L +N+I+ + + L L+VL +N+I + L GL LE+L L N+I I
Sbjct: 261 ELTELGLDANQIADLTPLAGLTNLQVLSASENRIADLTPLGGLVRLEQLGLNFNRIRDIS 320
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L L L +L L+ N++ + L LT L L L +N + + L + L L+V+ N
Sbjct: 321 ALEGLKALKVLELEGNQIVNLAPLAGLTELRVLVLGQNRIADLTPLGALVNLVQLEVSRN 380
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTV 275
+I+ + +A L L + N+V++ +
Sbjct: 381 EITDLGALAQLENLVRVSLVRNRVTNLGPL 410
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 86/159 (54%)
Query: 53 DEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSF 112
D ++ V + L L N I + + LT L+ L +N++ + L L+ LE L L+F
Sbjct: 254 DPLARLVELTELGLDANQIADLTPLAGLTNLQVLSASENRIADLTPLGGLVRLEQLGLNF 313
Query: 113 NRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLE 172
NRIR+I L+ L L+ L L N+I + + L +L+VL LG N+I + L L NL
Sbjct: 314 NRIRDISALEGLKALKVLELEGNQIVNLAPLAGLTELRVLVLGQNRIADLTPLGALVNLV 373
Query: 173 ELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEA 211
+L + +N+I+ + LA L L +SL NR+ + L A
Sbjct: 374 QLEVSRNEITDLGALAQLENLVRVSLVRNRVTNLGPLVA 412
>gi|887874|gb|AAA69536.1| internalin, partial [Listeria monocytogenes]
Length = 344
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 135/243 (55%), Gaps = 6/243 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
+L+ N I I + LT L L L++NQ+T I+ L L NL L+LS N I +I L
Sbjct: 51 ILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSG 110
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL++L L N+++ ++ + +L L+ L++ NK+ I L LTNLE L N+IS
Sbjct: 111 LTNLQQLSL-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 169
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L LT + LSL N+L+ I L +LTNLT L L+ N ++ + L KL L +
Sbjct: 170 ITPLGILTNWDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLRGLTKLTELKLG 229
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPVAQDPN 299
N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV+
Sbjct: 230 ANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPVSSLTK 288
Query: 300 YRR 302
+R
Sbjct: 289 LQR 291
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 121/220 (55%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT L++L L NQ+T ++ L L LE LD+S N++ +I
Sbjct: 92 LNRLELSSNTISDISALSGLTNLQQLSL-GNQVTDLKPLANLTTLERLDISSNKVSDISV 150
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE L +N+IS I + L L L N+++ I L LTNL +L L N+
Sbjct: 151 LAKLTNLESLIATNNQISDITPLGILTNWDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 210
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L LTKL L L N++ I L LT LT L L+EN L I + + + L L
Sbjct: 211 ISNLAPLRGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL 270
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ +N IS I ++ LT+LQ + +N+VSD +++ L N
Sbjct: 271 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTN 310
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 113/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L N + L L+ N++++I
Sbjct: 133 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNWDELSLNGNQLKDI 192
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 193 GTLASLTNLTDLDLANNQISNLAPLRGLTKLTELKLGANQISNISPLAGLTALTNLELNE 252
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 253 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 312
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 313 WLSAGHNQISDLTPLANLTRITQLGLND 340
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I+ I GL++L NL ++ +N+++ I + L KL + + +N+I I L LTNL L
Sbjct: 14 IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGL 73
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ ID L +LT LN L L N + I L LTNL QL L N +T ++ L +
Sbjct: 74 TLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTNLQQLSLG-NQVTDLKPLANL 132
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
LE LD++ NK+S I +A LT L+ +NQ+SD + +L N
Sbjct: 133 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTN 178
>gi|224007927|ref|XP_002292923.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971785|gb|EED90119.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 157
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 94/156 (60%), Gaps = 7/156 (4%)
Query: 170 NLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEA-LTNLTQLYLSENGL--- 225
NLEEL+LGKNKI RI+ L LTKL L +Q NRL IENL + + L +LYL+ NG+
Sbjct: 1 NLEELWLGKNKIERIEGLGKLTKLRRLDVQSNRLTKIENLTSQVDTLEELYLAHNGIDVE 60
Query: 226 -TTIENLLS--NEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNK 282
+ E L+ +L T+D++ N+++ AHL L + WI+ N++ + V L
Sbjct: 61 GASCETGLALPFTQLNTIDLSRNRLTNSTPFAHLKSLTDLWISGNEIKTFEEVEPLTALT 120
Query: 283 QLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDATL 318
+L +YL+ NPVA + YR+K+ + P + QIDA +
Sbjct: 121 ELDGVYLEYNPVASEFEYRKKLAEMIPSLTQIDANM 156
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 12/133 (9%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLIN-LEILDLSFNRIREIK 119
+E L L N I++IE + LT L+ L++ N+LT IENL + ++ LE L L+ N I +++
Sbjct: 2 LEELWLGKNKIERIEGLGKLTKLRRLDVQSNRLTKIENLTSQVDTLEELYLAHNGI-DVE 60
Query: 120 GLD-------HLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLE 172
G L + L N+++ HLK L L + N+I+ E ++ LT L
Sbjct: 61 GASCETGLALPFTQLNTIDLSRNRLTNSTPFAHLKSLTDLWISGNEIKTFEEVEPLTALT 120
Query: 173 EL---YLGKNKIS 182
EL YL N ++
Sbjct: 121 ELDGVYLEYNPVA 133
>gi|386828223|ref|ZP_10115330.1| Leucine Rich Repeat (LRR)-containing protein [Beggiatoa alba B18LD]
gi|386429107|gb|EIJ42935.1| Leucine Rich Repeat (LRR)-containing protein [Beggiatoa alba B18LD]
Length = 1098
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 122/234 (52%), Gaps = 3/234 (1%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V + L L +NL+ + + L L L L NQL + L+TLINL LDL N++ I
Sbjct: 177 VNLSTLYLSYNLLSNVSGLETLVNLSILYLSSNQLDTVLGLETLINLSGLDLRNNKLSNI 236
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
GL+ L NL LYL +N++S + + L L L L N++ + L+ L NL L L
Sbjct: 237 LGLERLVNLSSLYLRANQLSHVLELGMLVNLSELGLSSNQLSSMSGLEMLVNLSALDLRN 296
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++S + L L L+ L L N+L I LE L NL+ L LS N L+ + L + L
Sbjct: 297 NQLSHVSGLEMLVNLSSLDLSDNQLSHISGLETLQNLSSLDLSGNQLSRVSGLETLVNLS 356
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
+LD+ N++S + + L L ++ NQ+ N+++ LE K L + L N
Sbjct: 357 SLDLRENQLSSVSGLEMLKNLSSLYLGSNQL---NSISGLEQLKNLSVLDLHGN 407
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 2/184 (1%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V + L L N + + + ML L L+L +NQL+ + L+ L+NL LDLS N++ I
Sbjct: 265 VNLSELGLSSNQLSSMSGLEMLVNLSALDLRNNQLSHVSGLEMLVNLSSLDLSDNQLSHI 324
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
GL+ L NL L L N++S++ ++ L L L+L +N++ + L+ L NL LYLG
Sbjct: 325 SGLETLQNLSSLDLSGNQLSRVSGLETLVNLSSLDLRENQLSSVSGLEMLKNLSSLYLGS 384
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENG-LTTIEN-LLSNEK 236
N+++ I L L L++L L N+L +I LE L +L L L+EN L T+ N L K
Sbjct: 385 NQLNSISGLEQLKNLSVLDLHGNQLNSISELEGLIHLNVLALTENKFLATLSNELFDLPK 444
Query: 237 LETL 240
L+TL
Sbjct: 445 LKTL 448
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 122/233 (52%), Gaps = 1/233 (0%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
LR N + I + L L L L NQL+ + L L+NL L LS N++ + GL+ L
Sbjct: 228 LRNNKLSNILGLERLVNLSSLYLRANQLSHVLELGMLVNLSELGLSSNQLSSMSGLEMLV 287
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL L L +N++S + ++ L L L+L DN++ I L+ L NL L L N++SR+
Sbjct: 288 NLSALDLRNNQLSHVSGLEMLVNLSSLDLSDNQLSHISGLETLQNLSSLDLSGNQLSRVS 347
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L +L L+ L L+ N+L ++ LE L NL+ LYL N L +I L + L LD+ N
Sbjct: 348 GLETLVNLSSLDLRENQLSSVSGLEMLKNLSSLYLGSNQLNSISGLEQLKNLSVLDLHGN 407
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDP 298
+++ I + L L + +N+ N L + +L+T++L + P
Sbjct: 408 QLNSISELEGLIHLNVLALTENKFLA-TLSNELFDLPKLKTLWLKETTITYPP 459
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 124/224 (55%), Gaps = 3/224 (1%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N ++ + + L L L L N L+ + L+TL+NL IL LS N++ + GL+ L NL
Sbjct: 165 NQLQDLRVLETLVNLSTLYLSYNLLSNVSGLETLVNLSILYLSSNQLDTVLGLETLINLS 224
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
L L +NK+S I ++ L L L L N++ + L L NL EL L N++S + L
Sbjct: 225 GLDLRNNKLSNILGLERLVNLSSLYLRANQLSHVLELGMLVNLSELGLSSNQLSSMSGLE 284
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
L L+ L L+ N+L + LE L NL+ L LS+N L+ I L + + L +LD++ N++S
Sbjct: 285 MLVNLSALDLRNNQLSHVSGLEMLVNLSSLDLSDNQLSHISGLETLQNLSSLDLSGNQLS 344
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
+ + L L + +NQ+S +V+ LE K L ++YL N
Sbjct: 345 RVSGLETLVNLSSLDLRENQLS---SVSGLEMLKNLSSLYLGSN 385
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 112/214 (52%), Gaps = 2/214 (0%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V + L LR N + + + ML L EL L NQL+ + L+ L+NL LDL N++ +
Sbjct: 243 VNLSSLYLRANQLSHVLELGMLVNLSELGLSSNQLSSMSGLEMLVNLSALDLRNNQLSHV 302
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
GL+ L NL L L N++S I ++ L+ L L+L N++ + L+ L NL L L +
Sbjct: 303 SGLEMLVNLSSLDLSDNQLSHISGLETLQNLSSLDLSGNQLSRVSGLETLVNLSSLDLRE 362
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++S + L L L+ L L N+L +I LE L NL+ L L N L +I L L
Sbjct: 363 NQLSSVSGLEMLKNLSSLYLGSNQLNSISGLEQLKNLSVLDLHGNQLNSISELEGLIHLN 422
Query: 239 TLDVAYNKI--SIIQNIAHLTELQEFWINDNQVS 270
L + NK ++ + L +L+ W+ + ++
Sbjct: 423 VLALTENKFLATLSNELFDLPKLKTLWLKETTIT 456
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 108/196 (55%), Gaps = 1/196 (0%)
Query: 86 LELYDNQLTVIEN-LDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVD 144
LE+ +++LT + L L L LDLS N++++++ L+ L NL LYL N +S + ++
Sbjct: 137 LEITNHRLTQVPTWLARLTQLTGLDLSNNQLQDLRVLETLVNLSTLYLSYNLLSNVSGLE 196
Query: 145 HLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR 204
L L +L L N++ + L+ L NL L L NK+S I L L L+ L L+ N+L
Sbjct: 197 TLVNLSILYLSSNQLDTVLGLETLINLSGLDLRNNKLSNILGLERLVNLSSLYLRANQLS 256
Query: 205 TIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWI 264
+ L L NL++L LS N L+++ L L LD+ N++S + + L L +
Sbjct: 257 HVLELGMLVNLSELGLSSNQLSSMSGLEMLVNLSALDLRNNQLSHVSGLEMLVNLSSLDL 316
Query: 265 NDNQVSDWNTVNVLEN 280
+DNQ+S + + L+N
Sbjct: 317 SDNQLSHISGLETLQN 332
>gi|254416357|ref|ZP_05030110.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
gi|196176795|gb|EDX71806.1| Leucine Rich Repeat domain protein [Coleofasciculus chthonoplastes
PCC 7420]
Length = 438
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 127/255 (49%), Gaps = 12/255 (4%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I + + L+ L L L +N +T + L L NL + L+ N I I L
Sbjct: 166 LYLDSNSITDVSPLAGLSNLTVLNLGNNSITDVNPLAELSNLTKVFLTNNSITNISPLAE 225
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG------ 177
L+NL LYL SN I+ I + L L VL L +N I I L GL+NL EL LG
Sbjct: 226 LSNLTVLYLYSNSITDISPLAGLSNLTVLNLDNNSITDISPLAGLSNLTELSLGNADFFI 285
Query: 178 --KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
+N I+ I LA L+ L +L+L N + + L L+NLT+L L N +T I L
Sbjct: 286 IGENSITDISPLAGLSNLTVLNLGRNSITDVSPLAELSNLTKLSLGSNSITDISPLAGLS 345
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
L L + N I+ + +A L+ L E +++ N ++D + + L N L+ ++L N +A
Sbjct: 346 NLTKLYLDSNSITDVSPLAGLSNLTELFLSSNSITDASPLAQLTN---LRRLFLGDNLIA 402
Query: 296 QDPNYRRKIKLVCPW 310
Q P VC +
Sbjct: 403 Q-PTCPVSPPGVCSF 416
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 114/219 (52%), Gaps = 1/219 (0%)
Query: 68 W-NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLAN 126
W N I I + + L +L L N +T I L L NL +L L N I ++ L L+N
Sbjct: 59 WDNSITDISPLAGFSNLTKLYLESNSITDISPLAGLSNLTVLSLESNSITDVSPLAELSN 118
Query: 127 LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDN 186
L KLYL +N I+ + + L L L L +N I I L GL+NL LYL N I+ +
Sbjct: 119 LTKLYLNNNSITDVSPLAGLSNLTKLYLNNNSITDIGPLAGLSNLTVLYLDSNSITDVSP 178
Query: 187 LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK 246
LA L+ L +L+L N + + L L+NLT+++L+ N +T I L L L + N
Sbjct: 179 LAGLSNLTVLNLGNNSITDVNPLAELSNLTKVFLTNNSITNISPLAELSNLTVLYLYSNS 238
Query: 247 ISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQ 285
I+ I +A L+ L +++N ++D + + L N +L
Sbjct: 239 ITDISPLAGLSNLTVLNLDNNSITDISPLAGLSNLTELS 277
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 120/242 (49%), Gaps = 11/242 (4%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ +L L N I I + L+ L L L N +T + L L NL L L+ N I ++
Sbjct: 75 LTKLYLESNSITDISPLAGLSNLTVLSLESNSITDVSPLAELSNLTKLYLNNNSITDVSP 134
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+NL KLYL +N I+ I + L L VL L N I + L GL+NL L LG N
Sbjct: 135 LAGLSNLTKLYLNNNSITDIGPLAGLSNLTVLYLDSNSITDVSPLAGLSNLTVLNLGNNS 194
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ ++ LA L+ L + L N + I L L+NLT LYL N +T I L L L
Sbjct: 195 ITDVNPLAELSNLTKVFLTNNSITNISPLAELSNLTVLYLYSNSITDISPLAGLSNLTVL 254
Query: 241 DVAYNKISIIQNIAHLTELQE--------FWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
++ N I+ I +A L+ L E F I +N ++D + + L N L + L RN
Sbjct: 255 NLDNNSITDISPLAGLSNLTELSLGNADFFIIGENSITDISPLAGLSN---LTVLNLGRN 311
Query: 293 PV 294
+
Sbjct: 312 SI 313
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 105/210 (50%), Gaps = 14/210 (6%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ ++ L N I I + L+ L L LY N +T I L L NL +L+L N I +I
Sbjct: 207 LTKVFLTNNSITNISPLAELSNLTVLYLYSNSITDISPLAGLSNLTVLNLDNNSITDISP 266
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+NL +L L N D +G+N I I L GL+NL L LG+N
Sbjct: 267 LAGLSNLTELSL--------GNADFFI------IGENSITDISPLAGLSNLTVLNLGRNS 312
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + LA L+ L LSL N + I L L+NLT+LYL N +T + L L L
Sbjct: 313 ITDVSPLAELSNLTKLSLGSNSITDISPLAGLSNLTKLYLDSNSITDVSPLAGLSNLTEL 372
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVS 270
++ N I+ +A LT L+ ++ DN ++
Sbjct: 373 FLSSNSITDASPLAQLTNLRRLFLGDNLIA 402
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 106/210 (50%), Gaps = 3/210 (1%)
Query: 85 ELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVD 144
EL+L+DN +T I L NL L L N I +I L L+NL L L SN I+ + +
Sbjct: 55 ELQLWDNSITDISPLAGFSNLTKLYLESNSITDISPLAGLSNLTVLSLESNSITDVSPLA 114
Query: 145 HLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR 204
L L L L +N I + L GL+NL +LYL N I+ I LA L+ L +L L N +
Sbjct: 115 ELSNLTKLYLNNNSITDVSPLAGLSNLTKLYLNNNSITDIGPLAGLSNLTVLYLDSNSIT 174
Query: 205 TIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWI 264
+ L L+NLT L L N +T + L L + + N I+ I +A L+ L ++
Sbjct: 175 DVSPLAGLSNLTVLNLGNNSITDVNPLAELSNLTKVFLTNNSITNISPLAELSNLTVLYL 234
Query: 265 NDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
N ++D + + L N L + LD N +
Sbjct: 235 YSNSITDISPLAGLSN---LTVLNLDNNSI 261
>gi|328708332|ref|XP_003243660.1| PREDICTED: leucine-rich repeat-containing protein 4B-like
[Acyrthosiphon pisum]
Length = 597
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 140/243 (57%), Gaps = 13/243 (5%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK--GL 121
L L N I I+++ LT L+ L+L N++ IE+L L LE LDLS N I E+K
Sbjct: 135 LYLYRNNIMDIKSLAHLTKLETLDLSYNEIMDIESLAHLTELETLDLSNNNISELKHGAF 194
Query: 122 DHLANLEKLYLCSNKISKIEN--VDHLKKLKVLELGDNKIRIIEN--LDGLTNLEELYLG 177
+L+ L+ L+L +NKI IE ++L L+ L L DN I +++ GLT LE+L L
Sbjct: 195 ANLSKLQSLFLYTNKIENIETGVFNNLTSLESLSLHDNSIHNLDSEIFKGLTRLEKLTLS 254
Query: 178 KNKISRIDN--LASLTKLNILSLQCNRLRTIE--NLEALTNLTQLYLSENGLTTIEN--L 231
N I+ + N ++L KL IL LQ N++ IE + LT L L LS N ++ ++N
Sbjct: 255 NNNITEVKNRVFSNLPKLQILDLQNNKISGIERESFTYLTKLETLILSNNNISEVQNGAF 314
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
+ KL++LD++YN I I++++HLTEL+ +++N +S+ N +LQ ++L
Sbjct: 315 ANFSKLQSLDLSYNFIMDIESLSHLTELETLNLSNNNISEVKN-GAFTNLWKLQALFLSG 373
Query: 292 NPV 294
N +
Sbjct: 374 NKI 376
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 90/146 (61%), Gaps = 4/146 (2%)
Query: 150 KVLELGDNKI-RIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIEN 208
+ +E D K+ RI +N+ L + L L N+IS I++LA L +L L+L N++R IE+
Sbjct: 68 EAVECYDQKLNRIPDNI--LPATKTLILINNEISDIESLAYLRELQFLNLDNNKIRDIES 125
Query: 209 LEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQ 268
L LT L LYL N + I++L KLETLD++YN+I I+++AHLTEL+ +++N
Sbjct: 126 LANLTQLAILYLYRNNIMDIKSLAHLTKLETLDLSYNEIMDIESLAHLTELETLDLSNNN 185
Query: 269 VSDWNTVNVLENNKQLQTIYLDRNPV 294
+S+ N +LQ+++L N +
Sbjct: 186 ISELKH-GAFANLSKLQSLFLYTNKI 210
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 101/174 (58%), Gaps = 8/174 (4%)
Query: 105 LEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIEN 164
+E D NRI + + L + L L +N+IS IE++ +L++L+ L L +NKIR IE+
Sbjct: 70 VECYDQKLNRIPD----NILPATKTLILINNEISDIESLAYLRELQFLNLDNNKIRDIES 125
Query: 165 LDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENG 224
L LT L LYL +N I I +LA LTKL L L N + IE+L LT L L LS N
Sbjct: 126 LANLTQLAILYLYRNNIMDIKSLAHLTKLETLDLSYNEIMDIESLAHLTELETLDLSNNN 185
Query: 225 LTTIEN-LLSN-EKLETLDVAYNKISIIQN--IAHLTELQEFWINDNQVSDWNT 274
++ +++ +N KL++L + NKI I+ +LT L+ ++DN + + ++
Sbjct: 186 ISELKHGAFANLSKLQSLFLYTNKIENIETGVFNNLTSLESLSLHDNSIHNLDS 239
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 91/168 (54%), Gaps = 10/168 (5%)
Query: 75 ENIHMLTTLKELELYDNQLTVIEN--LDTLINLEILDLSFNRIREIKGLDHLANLEKLYL 132
E+ LT L+ L L +N ++ ++N L+ LDLS+N I +I+ L HL LE L L
Sbjct: 288 ESFTYLTKLETLILSNNNISEVQNGAFANFSKLQSLDLSYNFIMDIESLSHLTELETLNL 347
Query: 133 CSNKISKIEN--VDHLKKLKVLELGDNKIRIIEN--LDGLTNLEELYLGKNKISRI--DN 186
+N IS+++N +L KL+ L L NKI IE + LT+L L+L N I +I D
Sbjct: 348 SNNNISEVKNGAFTNLWKLQALFLSGNKIDNIETGAFNNLTSLRALFLDYNNIHKIDLDM 407
Query: 187 LASLTKLNILSLQCNRLRTIE--NLEALTNLTQLYLSENGLTTIENLL 232
L KLN L L N +R I ++L +L+ L L N LT N+L
Sbjct: 408 FKGLKKLNRLFLDHNMIRNIPPGTFDSLASLSVLQLDNNPLTCDCNIL 455
>gi|260801126|ref|XP_002595447.1| hypothetical protein BRAFLDRAFT_119045 [Branchiostoma floridae]
gi|229280693|gb|EEN51459.1| hypothetical protein BRAFLDRAFT_119045 [Branchiostoma floridae]
Length = 2767
Score = 104 bits (259), Expect = 6e-20, Method: Composition-based stats.
Identities = 95/341 (27%), Positives = 156/341 (45%), Gaps = 37/341 (10%)
Query: 3 VETVPNTDEVDNDNLVTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIE 62
V + P D N+V ++V++ Q D+ S A+ + E + K +
Sbjct: 52 VVSTPEEDGSSEQNVVMIDVQSGGGGEKRQ------DKISPADILQKSGEKDYGK---VY 102
Query: 63 RLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLD 122
+ L I +I N+ T L+ L+L NQLT IENLD +L L L N+I E+K LD
Sbjct: 103 EVDLHAEEITRIHNLEKFTRLRILDLSCNQLTTIENLDQNKDLRELKLYGNKITEVKNLD 162
Query: 123 HLANLEKLYLCSNKISKI-ENVDHLKKLKVLELGDNKIRIIE--NLDGLTNLEELYLGKN 179
L L L L N+I ++ + + L+KLK+L + N I ++E L + L L + N
Sbjct: 163 RLQELACLQLQHNRIRRLGKGLSCLRKLKILRIDSNDISLLEGKELTANSQLTHLDVSCN 222
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
K+ + + L L L+ NRL I N+ L L LS N LT + L L T
Sbjct: 223 KLQELAAVNCLPHLEELNASNNRLAAIRNMRC-KKLQDLDLSTNFLTDLSGLRDLHSLTT 281
Query: 240 LDVAYNKISIIQNIAHLTELQE-----------------------FWINDNQVSDWNTVN 276
L++A N++S + I L LQE +++N + W+ V
Sbjct: 282 LNLATNRLSSLTAIGKLRHLQELNVSNNLLKELGSVSEQFPALEVLNVSENAIVSWDQVC 341
Query: 277 VLENNKQLQTIYLDRNPVAQDP-NYRRKIKLVCPWIVQIDA 316
+L +QL +++ NP ++ +Y ++++ P + +D
Sbjct: 342 LLSKCQQLAELHISGNPFCKERFSYHQELQSQIPSLELLDG 382
>gi|428212495|ref|YP_007085639.1| hypothetical protein Oscil6304_2053 [Oscillatoria acuminata PCC
6304]
gi|428000876|gb|AFY81719.1| leucine-rich repeat (LRR) protein [Oscillatoria acuminata PCC 6304]
Length = 455
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 140/267 (52%), Gaps = 28/267 (10%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L L N I ++ + LT L +L L NQ+ + L L NLE L L+ N+I+++
Sbjct: 166 LEVLWLDENKIGEVASFASLTQLTQLHLSGNQIEDVAPLANLTNLESLWLNENKIKDVAS 225
Query: 121 LDHLANLEKLYLCSNKI-------------------SKIENVDHLKKLK---VLELGDNK 158
L + L +LYL SN+I ++I NV L L LEL +N+
Sbjct: 226 LVSMTKLTQLYLSSNEIEDLAPLKGLPEMAELQLNNNQIVNVAPLASLTNLTTLELNENQ 285
Query: 159 IRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
I+ I L LT L L L KN+I I LA+LTKL L L N ++ + L +LTNLT L
Sbjct: 286 IKDIAPLASLTQLGFLQLTKNQIVNISPLATLTKLETLQLLYNEIKDVAPLASLTNLTFL 345
Query: 219 YLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
L EN + + L S +L +LD++ N+I I +A+LT+L ++DNQ+ D V L
Sbjct: 346 TLGENQIKDVAPLASLTELTSLDLSNNEIKDIDPLANLTQLTFLHLSDNQIKD---VAPL 402
Query: 279 ENNKQLQTIYLDRNP---VAQDPNYRR 302
+ QL+ ++L N +A+ PN +
Sbjct: 403 ASLTQLKHLHLRNNEIKDIARLPNLTQ 429
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 137/256 (53%), Gaps = 7/256 (2%)
Query: 40 EESEAETTESKAEDEESKEVC-------IERLLLRWNLIKKIENIHMLTTLKELELYDNQ 92
+ES ++ TE +E K++ +E L L +N I+ I + LT L+ L+L N+
Sbjct: 72 QESLSKMTELGIRGDEIKDIAPLAGLTNLEWLELSYNKIEDIAPLAGLTNLEWLDLSYNK 131
Query: 93 LTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVL 152
+ I +L L NL+ L + N+I ++ L +L NLE L+L NKI ++ + L +L L
Sbjct: 132 IEDIASLANLNNLKFLAIRDNQIEDVAPLTNLTNLEVLWLDENKIGEVASFASLTQLTQL 191
Query: 153 ELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEAL 212
L N+I + L LTNLE L+L +NKI + +L S+TKL L L N + + L+ L
Sbjct: 192 HLSGNQIEDVAPLANLTNLESLWLNENKIKDVASLVSMTKLTQLYLSSNEIEDLAPLKGL 251
Query: 213 TNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDW 272
+ +L L+ N + + L S L TL++ N+I I +A LT+L + NQ+ +
Sbjct: 252 PEMAELQLNNNQIVNVAPLASLTNLTTLELNENQIKDIAPLASLTQLGFLQLTKNQIVNI 311
Query: 273 NTVNVLENNKQLQTIY 288
+ + L + LQ +Y
Sbjct: 312 SPLATLTKLETLQLLY 327
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 117/211 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L +R N I+ + + LT L+ L L +N++ + + +L L L LS N+I ++
Sbjct: 144 LKFLAIRDNQIEDVAPLTNLTNLEVLWLDENKIGEVASFASLTQLTQLHLSGNQIEDVAP 203
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L NLE L+L NKI + ++ + KL L L N+I + L GL + EL L N+
Sbjct: 204 LANLTNLESLWLNENKIKDVASLVSMTKLTQLYLSSNEIEDLAPLKGLPEMAELQLNNNQ 263
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I + LASLT L L L N+++ I L +LT L L L++N + I L + KLETL
Sbjct: 264 IVNVAPLASLTNLTTLELNENQIKDIAPLASLTQLGFLQLTKNQIVNISPLATLTKLETL 323
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ YN+I + +A LT L + +NQ+ D
Sbjct: 324 QLLYNEIKDVAPLASLTNLTFLTLGENQIKD 354
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 119/209 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ +L L N I+ + + L + EL+L +NQ+ + L +L NL L+L+ N+I++I
Sbjct: 232 LTQLYLSSNEIEDLAPLKGLPEMAELQLNNNQIVNVAPLASLTNLTTLELNENQIKDIAP 291
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L N+I I + L KL+ L+L N+I+ + L LTNL L LG+N+
Sbjct: 292 LASLTQLGFLQLTKNQIVNISPLATLTKLETLQLLYNEIKDVAPLASLTNLTFLTLGENQ 351
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I + LASLT+L L L N ++ I+ L LT LT L+LS+N + + L S +L+ L
Sbjct: 352 IKDVAPLASLTELTSLDLSNNEIKDIDPLANLTQLTFLHLSDNQIKDVAPLASLTQLKHL 411
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQV 269
+ N+I I + +LT++ F ++ N +
Sbjct: 412 HLRNNEIKDIARLPNLTQMDNFSVDGNPI 440
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 127/240 (52%), Gaps = 5/240 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L L N IK + ++ +T L +L L N++ + L L + L L+ N+I +
Sbjct: 210 LESLWLNENKIKDVASLVSMTKLTQLYLSSNEIEDLAPLKGLPEMAELQLNNNQIVNVAP 269
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL L L N+I I + L +L L+L N+I I L LT LE L L N+
Sbjct: 270 LASLTNLTTLELNENQIKDIAPLASLTQLGFLQLTKNQIVNISPLATLTKLETLQLLYNE 329
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I + LASLT L L+L N+++ + L +LT LT L LS N + I+ L + +L L
Sbjct: 330 IKDVAPLASLTNLTFLTLGENQIKDVAPLASLTELTSLDLSNNEIKDIDPLANLTQLTFL 389
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNY 300
++ N+I + +A LT+L+ + +N++ D + L N Q+ +D NP+ DP++
Sbjct: 390 HLSDNQIKDVAPLASLTQLKHLHLRNNEIKD---IARLPNLTQMDNFSVDGNPI--DPHF 444
>gi|326926540|ref|XP_003209457.1| PREDICTED: leucine-rich repeat-containing protein 49-like
[Meleagris gallopavo]
Length = 698
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+ L L+L DN+I I L L +L L LG
Sbjct: 123 IDGEDHL---RLLNFQHNFITRIQNISNLQHLVFLDLYDNQIEEISGLSTLRSLRVLLLG 179
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L+ L L L+ N L+T+ENL + L
Sbjct: 180 KNRIKKISNLENLKNLDVLDLHGNQISKIENINHLSELRVLNLARNLLSTVENLNGLDSL 239
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N++S I+++ L LQ +++ N +S + + L ++ L I LD NP+AQ+
Sbjct: 240 TELNLRHNQVSAIKDVDTLPRLQRLFLSFNNISSFEDILCLADSSSLSDITLDGNPIAQE 299
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 300 TWYKHTV 306
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 100/157 (63%), Gaps = 1/157 (0%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 130 RLLNFQHNFITRIQNISNLQHLVFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 189
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+ISKIEN++HL +L+VL L N + +ENL+GL +L EL L N++
Sbjct: 190 ENLKNLDVLDLHGNQISKIENINHLSELRVLNLARNLLSTVENLNGLDSLTELNLRHNQV 249
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
S I ++ +L +L L L N + + E++ L + + L
Sbjct: 250 SAIKDVDTLPRLQRLFLSFNNISSFEDILCLADSSSL 286
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 94/150 (62%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L +L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 129 LRLLNFQHNFITRIQNISNLQHLVFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISN 188
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L+ L L L +N +S ++NL L L L+L+ N+
Sbjct: 189 LENLKNLDVLDLHGNQISKIENINHLSELRVLNLARNLLSTVENLNGLDSLTELNLRHNQ 248
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLL 232
+ I++++ L L +L+LS N +++ E++L
Sbjct: 249 VSAIKDVDTLPRLQRLFLSFNNISSFEDIL 278
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 75/123 (60%), Gaps = 3/123 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
LLL N IKKI N+ L L L+L+ NQ++ IEN++ L L +L+L+ N + ++ L+
Sbjct: 176 LLLGKNRIKKISNLENLKNLDVLDLHGNQISKIENINHLSELRVLNLARNLLSTVENLNG 235
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGL---TNLEELYLGKNK 180
L +L +L L N++S I++VD L +L+ L L N I E++ L ++L ++ L N
Sbjct: 236 LDSLTELNLRHNQVSAIKDVDTLPRLQRLFLSFNNISSFEDILCLADSSSLSDITLDGNP 295
Query: 181 ISR 183
I++
Sbjct: 296 IAQ 298
>gi|315301494|ref|ZP_07872641.1| internalin A, partial [Listeria ivanovii FSL F6-596]
gi|313630136|gb|EFR98122.1| internalin A [Listeria ivanovii FSL F6-596]
Length = 759
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 129/241 (53%), Gaps = 4/241 (1%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I+ + LT L++L L DN++T I + LINL+ L L N+ ++ L L NL
Sbjct: 195 NQVTDIKPLDKLTNLEQLNLSDNKITDISPVAKLINLQSLTLDNNQFSDLTPLGILTNLT 254
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L L SN +S I + L LK L L DN+I + + LTNL +L + N+IS + ++
Sbjct: 255 ELSLYSNHLSDIGTLASLTNLKKLNLMDNQISNLAPISNLTNLTDLNVSTNQISDLKPIS 314
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
+LT L +L + N++ I + +LTNL L L N ++ I L + KL+ L NK+S
Sbjct: 315 NLTNLTVLQVPTNQVEDISPISSLTNLDFLTLYSNQISDISPLENLTKLKQLFFYDNKVS 374
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVC 308
+ +A+LT LQE NQ+SD + L QL LD+ V P + + +V
Sbjct: 375 DVSPLANLTTLQELSAGTNQISDLTPLAKLTRLTQLG---LDKQKVTSQP-VKYQSNIVV 430
Query: 309 P 309
P
Sbjct: 431 P 431
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 124/225 (55%), Gaps = 1/225 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ +L +N I + + L+ L L + +NQ+ + L L +L L L +N+I ++
Sbjct: 100 VTQLNFSYNQITDLTPLANLSKLTSLVMNNNQVADLTPLQNLTSLTDLTLFYNKITDVTP 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L NL L + N+IS + + L L+ L +G N++ I+ LD LTNLE+L L NK
Sbjct: 160 LANLTNLTTLAITGNEISDLTPIGSLTNLEALSIG-NQVTDIKPLDKLTNLEQLNLSDNK 218
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ I +A L L L+L N+ + L LTNLT+L L N L+ I L S L+ L
Sbjct: 219 ITDISPVAKLINLQSLTLDNNQFSDLTPLGILTNLTELSLYSNHLSDIGTLASLTNLKKL 278
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQ 285
++ N+IS + I++LT L + ++ NQ+SD ++ L N LQ
Sbjct: 279 NLMDNQISNLAPISNLTNLTDLNVSTNQISDLKPISNLTNLTVLQ 323
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 112/210 (53%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E+L L N I I + L L+ L L +NQ + + L L NL L L N + +I
Sbjct: 209 LEQLNLSDNKITDISPVAKLINLQSLTLDNNQFSDLTPLGILTNLTELSLYSNHLSDIGT 268
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+KL L N+IS + + +L L L + N+I ++ + LTNL L + N+
Sbjct: 269 LASLTNLKKLNLMDNQISNLAPISNLTNLTDLNVSTNQISDLKPISNLTNLTVLQVPTNQ 328
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
+ I ++SLT L+ L+L N++ I LE LT L QL+ +N ++ + L + L+ L
Sbjct: 329 VEDISPISSLTNLDFLTLYSNQISDISPLENLTKLKQLFFYDNKVSDVSPLANLTTLQEL 388
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVS 270
N+IS + +A LT L + ++ +V+
Sbjct: 389 SAGTNQISDLTPLAKLTRLTQLGLDKQKVT 418
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 93/167 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L L N + I + LT LK+L L DNQ++ + + L NL L++S N+I ++K
Sbjct: 253 LTELSLYSNHLSDIGTLASLTNLKKLNLMDNQISNLAPISNLTNLTDLNVSTNQISDLKP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ +L NL L + +N++ I + L L L L N+I I L+ LT L++L+ NK
Sbjct: 313 ISNLTNLTVLQVPTNQVEDISPISSLTNLDFLTLYSNQISDISPLENLTKLKQLFFYDNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
+S + LA+LT L LS N++ + L LT LTQL L + +T+
Sbjct: 373 VSDVSPLANLTTLQELSAGTNQISDLTPLAKLTRLTQLGLDKQKVTS 419
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 110/202 (54%), Gaps = 1/202 (0%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
+ LE N + I ++ L N+ L+ S+N+I ++ L +L+ L L + +N+++ +
Sbjct: 78 ITSLEADRNVIKSIAGVEYLNNVTQLNFSYNQITDLTPLANLSKLTSLVMNNNQVADLTP 137
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+ +L L L L NKI + L LTNL L + N+IS + + SLT L LS+ N+
Sbjct: 138 LQNLTSLTDLTLFYNKITDVTPLANLTNLTTLAITGNEISDLTPIGSLTNLEALSI-GNQ 196
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ I+ L+ LTNL QL LS+N +T I + L++L + N+ S + + LT L E
Sbjct: 197 VTDIKPLDKLTNLEQLNLSDNKITDISPVAKLINLQSLTLDNNQFSDLTPLGILTNLTEL 256
Query: 263 WINDNQVSDWNTVNVLENNKQL 284
+ N +SD T+ L N K+L
Sbjct: 257 SLYSNHLSDIGTLASLTNLKKL 278
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 22/127 (17%)
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
LGK +S L + L N +++I +E L N+TQL S N +T + L +
Sbjct: 61 LGKATVSDTVTQTDLDGITSLEADRNVIKSIAGVEYLNNVTQLNFSYNQITDLTPLANLS 120
Query: 236 KLETL-----DVA-----------------YNKISIIQNIAHLTELQEFWINDNQVSDWN 273
KL +L VA YNKI+ + +A+LT L I N++SD
Sbjct: 121 KLTSLVMNNNQVADLTPLQNLTSLTDLTLFYNKITDVTPLANLTNLTTLAITGNEISDLT 180
Query: 274 TVNVLEN 280
+ L N
Sbjct: 181 PIGSLTN 187
>gi|193784780|dbj|BAG53933.1| unnamed protein product [Homo sapiens]
Length = 675
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 98 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 154
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 155 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 214
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 215 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 274
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 275 SWYKHTV 281
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 105 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 164
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 165 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 224
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 225 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 274
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 275 -SWYKHTVLQNMMQLRQL 291
>gi|395822435|ref|XP_003784523.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 2
[Otolemur garnettii]
Length = 642
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 114/187 (60%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 64 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 120
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L++L L L+ N L+ ++NL + L
Sbjct: 121 KNRIKKISNLENLKSLDVLDLHGNQITKIENVNHLSDLRVLNLARNFLSHVDNLNGLDSL 180
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 181 TELNLRHNQITFVKDVDNLPCLQRLFLSFNNISSFDSVSCLADSTSLSDISFDGNPIAQE 240
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 241 SWYKHTV 247
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 118/199 (59%), Gaps = 14/199 (7%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 71 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 130
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 131 ENLKSLDVLDLHGNQITKIENVNHLSDLRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 190
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLY-LSENGLTTIENLLSNEKLETL 240
+ + ++ +L L L L N + + +++ L + T L +S +G N ++ E
Sbjct: 191 TFVKDVDNLPCLQRLFLSFNNISSFDSVSCLADSTSLSDISFDG-----NPIAQE----- 240
Query: 241 DVAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 241 --SWYKHTVLQNMMQLRQL 257
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 70 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISN 129
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L++L L L +N +S +DNL L L L+L+ N+
Sbjct: 130 LENLKSLDVLDLHGNQITKIENVNHLSDLRVLNLARNFLSHVDNLNGLDSLTELNLRHNQ 189
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ +++++ L L +L+LS N +++ ++ + +A T L +
Sbjct: 190 ITFVKDVDNLPCLQRLFLSFNNISSFDS-------------------VSCLADSTSLSDI 230
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 231 SFDGNPIAQESWYKHTVLQNMMQLRQLDMKR 261
>gi|350539025|ref|NP_001233293.1| leucine-rich repeat-containing protein 49 [Pan troglodytes]
gi|343959640|dbj|BAK63677.1| leucine-rich repeat-containing protein 49 [Pan troglodytes]
gi|410210104|gb|JAA02271.1| leucine rich repeat containing 49 [Pan troglodytes]
gi|410266996|gb|JAA21464.1| leucine rich repeat containing 49 [Pan troglodytes]
gi|410287982|gb|JAA22591.1| leucine rich repeat containing 49 [Pan troglodytes]
gi|410332891|gb|JAA35392.1| leucine rich repeat containing 49 [Pan troglodytes]
Length = 686
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 108 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMMQLRQL 301
>gi|443316011|ref|ZP_21045475.1| Leucine Rich Repeat (LRR)-containing protein [Leptolyngbya sp. PCC
6406]
gi|442784393|gb|ELR94269.1| Leucine Rich Repeat (LRR)-containing protein [Leptolyngbya sp. PCC
6406]
Length = 437
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 119/215 (55%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N + ++ + LT L+ L L DNQ+ + L TL NLE L LS+N+I EI L L
Sbjct: 153 LSGNQVVDVQPLSNLTGLEWLFLDDNQIVDVAPLATLQNLERLLLSYNQIVEIGALSALE 212
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
L+ LYL N+I ++ + L+ L LEL +N++ I+ L L NL L L N+I +
Sbjct: 213 KLQNLYLNGNQIEDVQPLSGLRNLAWLELKENQVMNIQPLADLENLRWLGLDDNQIVDVQ 272
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
LA+L+ L L L N++ + +L ALTNL L L +N + I++L E L L ++ N
Sbjct: 273 PLAALSTLKNLYLNGNQITDVSSLAALTNLESLVLGDNQIVDIQSLSLLENLTFLVLSGN 332
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+I + ++ L L+ +NDNQ+ D + L N
Sbjct: 333 QIVNVSPLSALVRLERLGLNDNQIQDVQPLATLTN 367
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 125/237 (52%)
Query: 44 AETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLI 103
AE + +S + + +LLL + I + + LT L L L NQ++ I+ L +L
Sbjct: 65 AEAGTENCDRADSTLMNVTQLLLGGSEIVDVRPLSTLTNLTSLVLSGNQISDIQPLASLT 124
Query: 104 NLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE 163
LE L L N+I I+ L L NL L L N++ ++ + +L L+ L L DN+I +
Sbjct: 125 KLESLFLESNQITNIQSLGGLHNLTWLSLSGNQVVDVQPLSNLTGLEWLFLDDNQIVDVA 184
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
L L NLE L L N+I I L++L KL L L N++ ++ L L NL L L EN
Sbjct: 185 PLATLQNLERLLLSYNQIVEIGALSALEKLQNLYLNGNQIEDVQPLSGLRNLAWLELKEN 244
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ I+ L E L L + N+I +Q +A L+ L+ ++N NQ++D +++ L N
Sbjct: 245 QVMNIQPLADLENLRWLGLDDNQIVDVQPLAALSTLKNLYLNGNQITDVSSLAALTN 301
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 120/211 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N I+ ++ + L L LEL +NQ+ I+ L L NL L L N+I +++
Sbjct: 214 LQNLYLNGNQIEDVQPLSGLRNLAWLELKENQVMNIQPLADLENLRWLGLDDNQIVDVQP 273
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+ L+ LYL N+I+ + ++ L L+ L LGDN+I I++L L NL L L N+
Sbjct: 274 LAALSTLKNLYLNGNQITDVSSLAALTNLESLVLGDNQIVDIQSLSLLENLTFLVLSGNQ 333
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I + L++L +L L L N+++ ++ L LTNL+ L LS N + +E L + E + L
Sbjct: 334 IVNVSPLSALVRLERLGLNDNQIQDVQPLATLTNLSVLVLSNNQIVDVEPLAALENVGLL 393
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ +N+I IQ ++ L+ L + N +SD
Sbjct: 394 SLDHNQIVDIQPLSQLSRLGLLHLAGNPLSD 424
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 123/220 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+L N I I+ + LT L+ L L NQ+T I++L L NL L LS N++ +++
Sbjct: 104 LTSLVLSGNQISDIQPLASLTKLESLFLESNQITNIQSLGGLHNLTWLSLSGNQVVDVQP 163
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L LE L+L N+I + + L+ L+ L L N+I I L L L+ LYL N+
Sbjct: 164 LSNLTGLEWLFLDDNQIVDVAPLATLQNLERLLLSYNQIVEIGALSALEKLQNLYLNGNQ 223
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I + L+ L L L L+ N++ I+ L L NL L L +N + ++ L + L+ L
Sbjct: 224 IEDVQPLSGLRNLAWLELKENQVMNIQPLADLENLRWLGLDDNQIVDVQPLAALSTLKNL 283
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ N+I+ + ++A LT L+ + DNQ+ D ++++LEN
Sbjct: 284 YLNGNQITDVSSLAALTNLESLVLGDNQIVDIQSLSLLEN 323
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 120/218 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L L N I I+++ L L L L NQ+ ++ L L LE L L N+I ++
Sbjct: 126 LESLFLESNQITNIQSLGGLHNLTWLSLSGNQVVDVQPLSNLTGLEWLFLDDNQIVDVAP 185
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NLE+L L N+I +I + L+KL+ L L N+I ++ L GL NL L L +N+
Sbjct: 186 LATLQNLERLLLSYNQIVEIGALSALEKLQNLYLNGNQIEDVQPLSGLRNLAWLELKENQ 245
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
+ I LA L L L L N++ ++ L AL+ L LYL+ N +T + +L + LE+L
Sbjct: 246 VMNIQPLADLENLRWLGLDDNQIVDVQPLAALSTLKNLYLNGNQITDVSSLAALTNLESL 305
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
+ N+I IQ+++ L L ++ NQ+ + + ++ L
Sbjct: 306 VLGDNQIVDIQSLSLLENLTFLVLSGNQIVNVSPLSAL 343
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 125/235 (53%), Gaps = 3/235 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ERLLL +N I +I + L L+ L L NQ+ ++ L L NL L+L N++ I+
Sbjct: 192 LERLLLSYNQIVEIGALSALEKLQNLYLNGNQIEDVQPLSGLRNLAWLELKENQVMNIQP 251
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL L L N+I ++ + L LK L L N+I + +L LTNLE L LG N+
Sbjct: 252 LADLENLRWLGLDDNQIVDVQPLAALSTLKNLYLNGNQITDVSSLAALTNLESLVLGDNQ 311
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I I +L+ L L L L N++ + L AL L +L L++N + ++ L + L L
Sbjct: 312 IVDIQSLSLLENLTFLVLSGNQIVNVSPLSALVRLERLGLNDNQIQDVQPLATLTNLSVL 371
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
++ N+I ++ +A L + ++ NQ+ D + L +L ++L NP++
Sbjct: 372 VLSNNQIVDVEPLAALENVGLLSLDHNQIVD---IQPLSQLSRLGLLHLAGNPLS 423
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
S V +ERL L N I+ ++ + LT L L L +NQ+ +E L L N+ +L L N+I
Sbjct: 341 SALVRLERLGLNDNQIQDVQPLATLTNLSVLVLSNNQIVDVEPLAALENVGLLSLDHNQI 400
Query: 116 REIKGLDHLANLEKLYLCSNKIS 138
+I+ L L+ L L+L N +S
Sbjct: 401 VDIQPLSQLSRLGLLHLAGNPLS 423
>gi|395822433|ref|XP_003784522.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 1
[Otolemur garnettii]
Length = 686
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 114/187 (60%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L++L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENVNHLSDLRVLNLARNFLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVKDVDNLPCLQRLFLSFNNISSFDSVSCLADSTSLSDISFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 118/199 (59%), Gaps = 14/199 (7%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENVNHLSDLRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLY-LSENGLTTIENLLSNEKLETL 240
+ + ++ +L L L L N + + +++ L + T L +S +G N ++ E
Sbjct: 235 TFVKDVDNLPCLQRLFLSFNNISSFDSVSCLADSTSLSDISFDG-----NPIAQE----- 284
Query: 241 DVAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 --SWYKHTVLQNMMQLRQL 301
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 114 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISN 173
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L++L L L +N +S +DNL L L L+L+ N+
Sbjct: 174 LENLKSLDVLDLHGNQITKIENVNHLSDLRVLNLARNFLSHVDNLNGLDSLTELNLRHNQ 233
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ +++++ L L +L+LS N +++ ++ + +A T L +
Sbjct: 234 ITFVKDVDNLPCLQRLFLSFNNISSFDS-------------------VSCLADSTSLSDI 274
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 275 SFDGNPIAQESWYKHTVLQNMMQLRQLDMKR 305
>gi|109081720|ref|XP_001088738.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 4
[Macaca mulatta]
Length = 676
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 98 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 154
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 155 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 214
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 215 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 274
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 275 SWYKHTV 281
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 105 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 164
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 165 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 224
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 225 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 274
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 275 -SWYKHTVLQNMMQLRQL 291
>gi|23272720|gb|AAH37982.1| Leucine rich repeat containing 49 [Homo sapiens]
Length = 685
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 108 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMMQLRQL 301
>gi|397495492|ref|XP_003818587.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 1 [Pan
paniscus]
Length = 686
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 108 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMMQLRQL 301
>gi|55743114|ref|NP_060161.2| leucine-rich repeat-containing protein 49 isoform 2 [Homo sapiens]
gi|269849615|sp|Q8IUZ0.2|LRC49_HUMAN RecName: Full=Leucine-rich repeat-containing protein 49; AltName:
Full=Tubulin polyglutamylase complex subunit 4;
Short=PGs4
gi|119598273|gb|EAW77867.1| leucine rich repeat containing 49, isoform CRA_d [Homo sapiens]
Length = 686
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 108 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMMQLRQL 301
>gi|326201424|ref|ZP_08191295.1| Dockerin type 1 [Clostridium papyrosolvens DSM 2782]
gi|325988024|gb|EGD48849.1| Dockerin type 1 [Clostridium papyrosolvens DSM 2782]
Length = 1098
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 115/212 (54%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I + + LT+LK L LY + ++ I L LINLE LDL N + +I L +
Sbjct: 89 LSLSKNKISDVTPLAGLTSLKYLALYQSNISNINALAGLINLEYLDLGMNSVSDISALKN 148
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
+ L L L N I+ I + L L+ L+LG N+I I + LT L+ L+L N+IS
Sbjct: 149 MTKLTYLELSWNNITDISALSKLTNLQYLQLGCNRIVDISPISNLTKLKTLHLFYNRISD 208
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I L+ L L L L N + I L LT L+ L L N +T I L K+ LD++
Sbjct: 209 ISGLSGLKTLTYLHLNSNNVSNINPLNGLTMLSYLDLGFNKITDISALNKLTKITDLDLS 268
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTV 275
YNKI+ I +++LT L + + +N +++++ +
Sbjct: 269 YNKITNINVLSNLTSLNDLKLENNPINNYSPI 300
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 119/224 (53%), Gaps = 3/224 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I + I LT L L L N+++ + L L +L+ L L + I I L L NLE L
Sbjct: 74 INNLTGIECLTNLTMLSLSKNKISDVTPLAGLTSLKYLALYQSNISNINALAGLINLEYL 133
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N +S I + ++ KL LEL N I I L LTNL+ L LG N+I I +++L
Sbjct: 134 DLGMNSVSDISALKNMTKLTYLELSWNNITDISALSKLTNLQYLQLGCNRIVDISPISNL 193
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
TKL L L NR+ I L L LT L+L+ N ++ I L L LD+ +NKI+ I
Sbjct: 194 TKLKTLHLFYNRISDISGLSGLKTLTYLHLNSNNVSNINPLNGLTMLSYLDLGFNKITDI 253
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
+ LT++ + ++ N++++ +NVL N L + L+ NP+
Sbjct: 254 SALNKLTKITDLDLSYNKITN---INVLSNLTSLNDLKLENNPI 294
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 85/163 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L L N + I + +T L LEL N +T I L L NL+ L L NRI +I
Sbjct: 130 LEYLDLGMNSVSDISALKNMTKLTYLELSWNNITDISALSKLTNLQYLQLGCNRIVDISP 189
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ +L L+ L+L N+IS I + LK L L L N + I L+GLT L L LG NK
Sbjct: 190 ISNLTKLKTLHLFYNRISDISGLSGLKTLTYLHLNSNNVSNINPLNGLTMLSYLDLGFNK 249
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
I+ I L LTK+ L L N++ I L LT+L L L N
Sbjct: 250 ITDISALNKLTKITDLDLSYNKITNINVLSNLTSLNDLKLENN 292
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 137/273 (50%), Gaps = 45/273 (16%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N + I ++ LT L L+L N++T I L+ L + LDLS+N+I I L +
Sbjct: 221 LHLNSNNVSNINPLNGLTMLSYLDLGFNKITDISALNKLTKITDLDLSYNKITNINVLSN 280
Query: 124 LANLEKLYLCSNKI----------SKIENVDH---------------------------- 145
L +L L L +N I SK+ D
Sbjct: 281 LTSLNDLKLENNPINNYSPITGIISKLTKKDFNLEPISFPDADLAKAVCHQLGKNSEDMI 340
Query: 146 ----LKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++ VL+ G+ +I+ + ++ L NL++LYL N++ I+ +++LT L L+L+ N
Sbjct: 341 YKIEAPQITVLDAGNMEIKSLSGIEQLCNLKDLYLAGNELDNINPISALTSLEALNLEKN 400
Query: 202 RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
++ + L L NL L L +N ++ I L L+TLD++YN ++ +N++ L L E
Sbjct: 401 QISDLNVLRNLHNLKYLILRDNKISDITPLSDLSSLKTLDLSYNSLTNTKNLSKLVNLYE 460
Query: 262 FWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
++DN+++D +N L+N +L+ + LD+N +
Sbjct: 461 LHLDDNEIND---INGLQNITKLKILTLDKNQI 490
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 80/136 (58%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK + I L LK+L L N+L I + L +LE L+L N+I ++ L +L NL+ L
Sbjct: 358 IKSLSGIEQLCNLKDLYLAGNELDNINPISALTSLEALNLEKNQISDLNVLRNLHNLKYL 417
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L NKIS I + L LK L+L N + +NL L NL EL+L N+I+ I+ L ++
Sbjct: 418 ILRDNKISDITPLSDLSSLKTLDLSYNSLTNTKNLSKLVNLYELHLDDNEINDINGLQNI 477
Query: 191 TKLNILSLQCNRLRTI 206
TKL IL+L N+++ +
Sbjct: 478 TKLKILTLDKNQIQDV 493
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 4/200 (2%)
Query: 105 LEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIEN 164
+ +LD I+ + G++ L NL+ LYL N++ I + L L+ L L N+I +
Sbjct: 348 ITVLDAGNMEIKSLSGIEQLCNLKDLYLAGNELDNINPISALTSLEALNLEKNQISDLNV 407
Query: 165 LDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENG 224
L L NL+ L L NKIS I L+ L+ L L L N L +NL L NL +L+L +N
Sbjct: 408 LRNLHNLKYLILRDNKISDITPLSDLSSLKTLDLSYNSLTNTKNLSKLVNLYELHLDDNE 467
Query: 225 LTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQL 284
+ I L + KL+ L + N+I + + + +L + +N +SD ++ ++N +L
Sbjct: 468 INDINGLQNITKLKILTLDKNQIQDVCLLKNKLDLISLCLRNNLISD---ISCIKNLPKL 524
Query: 285 QTIYLDRNPVAQDPNYRRKI 304
++L NP+ QD + + I
Sbjct: 525 VDLFLLPNPI-QDFSPAKGI 543
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 86/159 (54%), Gaps = 3/159 (1%)
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
I+ + ++ L L +L L NKI + L GLT+L+ L L ++ IS I+ LA L L L
Sbjct: 74 INNLTGIECLTNLTMLSLSKNKISDVTPLAGLTSLKYLALYQSNISNINALAGLINLEYL 133
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
L N + I L+ +T LT L LS N +T I L L+ L + N+I I I++L
Sbjct: 134 DLGMNSVSDISALKNMTKLTYLELSWNNITDISALSKLTNLQYLQLGCNRIVDISPISNL 193
Query: 257 TELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
T+L+ + N++SD ++ L K L ++L+ N V+
Sbjct: 194 TKLKTLHLFYNRISD---ISGLSGLKTLTYLHLNSNNVS 229
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 77/160 (48%), Gaps = 25/160 (15%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK ++ L L N I I I LT LK L L+ +NRI
Sbjct: 169 SKLTNLQYLQLGCNRIVDISPISNLTKLKTLHLF----------------------YNRI 206
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
+I GL L L L+L SN +S I ++ L L L+LG NKI I L+ LT + +L
Sbjct: 207 SDISGLSGLKTLTYLHLNSNNVSNINPLNGLTMLSYLDLGFNKITDISALNKLTKITDLD 266
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNL 215
L NKI+ I+ L++LT LN L L+ N I N +T +
Sbjct: 267 LSYNKITNINVLSNLTSLNDLKLENNP---INNYSPITGI 303
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 115/233 (49%), Gaps = 4/233 (1%)
Query: 49 SKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEIL 108
S + + +K VC + ++I KIE + L+ + ++ + ++ L NL+ L
Sbjct: 318 SFPDADLAKAVCHQLGKNSEDMIYKIEAPQITV----LDAGNMEIKSLSGIEQLCNLKDL 373
Query: 109 DLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGL 168
L+ N + I + L +LE L L N+IS + + +L LK L L DNKI I L L
Sbjct: 374 YLAGNELDNINPISALTSLEALNLEKNQISDLNVLRNLHNLKYLILRDNKISDITPLSDL 433
Query: 169 TNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTI 228
++L+ L L N ++ NL+ L L L L N + I L+ +T L L L +N + +
Sbjct: 434 SSLKTLDLSYNSLTNTKNLSKLVNLYELHLDDNEINDINGLQNITKLKILTLDKNQIQDV 493
Query: 229 ENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENN 281
L + L +L + N IS I I +L +L + ++ N + D++ + +N
Sbjct: 494 CLLKNKLDLISLCLRNNLISDISCIKNLPKLVDLFLLPNPIQDFSPAKGIYSN 546
>gi|355692845|gb|EHH27448.1| Tubulin polyglutamylase complex subunit 4 [Macaca mulatta]
gi|355778147|gb|EHH63183.1| Tubulin polyglutamylase complex subunit 4 [Macaca fascicularis]
gi|380814014|gb|AFE78881.1| leucine-rich repeat-containing protein 49 isoform 2 [Macaca
mulatta]
Length = 686
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 108 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMMQLRQL 301
>gi|109081724|ref|XP_001088863.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 5
[Macaca mulatta]
Length = 658
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 80 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 136
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 137 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 196
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 197 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 256
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 257 SWYKHTV 263
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 87 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 146
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 147 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 206
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 207 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 256
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 257 -SWYKHTVLQNMMQLRQL 273
>gi|255024787|ref|ZP_05296773.1| internalin A [Listeria monocytogenes FSL J1-208]
Length = 200
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 113/198 (57%), Gaps = 1/198 (0%)
Query: 74 IENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLC 133
I + LT+L++L + NQ+T ++ L L LE LD+S N++ +I L L NLE L
Sbjct: 3 ISALSGLTSLQQLS-FGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIAT 61
Query: 134 SNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKL 193
+N+IS I + L L L L N+++ I L LTNL +L L N+IS + L+ LTKL
Sbjct: 62 NNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKL 121
Query: 194 NILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNI 253
L L N++ I L LT LT L L+EN L I + + + L L + +N IS I +
Sbjct: 122 TELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPV 181
Query: 254 AHLTELQEFWINDNQVSD 271
+ LT+LQ + +N+VSD
Sbjct: 182 SSLTKLQRLFFYNNKVSD 199
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 6/191 (3%)
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
+I L L +L++L N+++ ++ + +L L+ L++ NK+ I L LTNLE L
Sbjct: 1 SDISALSGLTSLQQLSF-GNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLI 59
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L
Sbjct: 60 ATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLT 119
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DR 291
KL L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D
Sbjct: 120 KLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDI 178
Query: 292 NPVAQDPNYRR 302
+PV+ +R
Sbjct: 179 SPVSSLTKLQR 189
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 90/165 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 31 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 90
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 91 GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNE 150
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
N++ I +++L L L+L N + I + +LT L +L+ N
Sbjct: 151 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNN 195
>gi|297296787|ref|XP_001089082.2| PREDICTED: leucine-rich repeat-containing protein 49 isoform 7
[Macaca mulatta]
Length = 691
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 113 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 169
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 170 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 229
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 230 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 289
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 290 SWYKHTV 296
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 120 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 179
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 180 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 239
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 240 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 289
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 290 -SWYKHTVLQNMMQLRQL 306
>gi|221040878|dbj|BAH12102.1| unnamed protein product [Homo sapiens]
Length = 691
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 113 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 169
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 170 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 229
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 230 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 289
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 290 SWYKHTV 296
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 120 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 179
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 180 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 239
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 240 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 289
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 290 -SWYKHTVLQNMMQLRQL 306
>gi|312222716|ref|NP_001185946.1| leucine-rich repeat-containing protein 49 isoform 1 [Homo sapiens]
Length = 691
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 113 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 169
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 170 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 229
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 230 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 289
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 290 SWYKHTV 296
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 120 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 179
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 180 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 239
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 240 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 289
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 290 -SWYKHTVLQNMMQLRQL 306
>gi|55730545|emb|CAH91994.1| hypothetical protein [Pongo abelii]
Length = 622
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 108 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMMQLRQL 301
>gi|397495496|ref|XP_003818589.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 3 [Pan
paniscus]
Length = 658
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 80 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 136
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 137 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 196
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 197 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 256
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 257 SWYKHTV 263
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 87 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 146
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 147 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 206
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 207 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 256
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 257 -SWYKHTVLQNMMQLRQL 273
>gi|297296789|ref|XP_002804891.1| PREDICTED: leucine-rich repeat-containing protein 49 [Macaca
mulatta]
Length = 642
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 64 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 120
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 121 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 180
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 181 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 240
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 241 SWYKHTV 247
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 71 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 130
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 131 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 190
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 191 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 240
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 241 -SWYKHTVLQNMMQLRQL 257
>gi|297296785|ref|XP_002804890.1| PREDICTED: leucine-rich repeat-containing protein 49 [Macaca
mulatta]
Length = 728
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 150 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 206
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 207 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 266
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 267 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 326
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 327 SWYKHTV 333
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 157 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 216
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 217 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 276
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 277 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 326
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 327 -SWYKHTVLQNMMQLRQL 343
>gi|193783613|dbj|BAG53524.1| unnamed protein product [Homo sapiens]
Length = 657
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 80 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 136
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 137 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 196
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 197 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 256
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 257 SWYKHTV 263
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 87 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 146
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 147 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 206
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 207 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 256
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 257 -SWYKHTVLQNMMQLRQL 273
>gi|119598272|gb|EAW77866.1| leucine rich repeat containing 49, isoform CRA_c [Homo sapiens]
Length = 658
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 80 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 136
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 137 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 196
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 197 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 256
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 257 SWYKHTV 263
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 87 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 146
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 147 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 206
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 207 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 256
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 257 -SWYKHTVLQNMMQLRQL 273
>gi|221043838|dbj|BAH13596.1| unnamed protein product [Homo sapiens]
Length = 641
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 64 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 120
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 121 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 180
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 181 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 240
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 241 SWYKHTV 247
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 71 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 130
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 131 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 190
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 191 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 240
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 241 -SWYKHTVLQNMMQLRQL 257
>gi|397495494|ref|XP_003818588.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 2 [Pan
paniscus]
Length = 642
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 64 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 120
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 121 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 180
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 181 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 240
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 241 SWYKHTV 247
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 71 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 130
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 131 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 190
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 191 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 240
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 241 -SWYKHTVLQNMMQLRQL 257
>gi|312222719|ref|NP_001185947.1| leucine-rich repeat-containing protein 49 isoform 3 [Homo sapiens]
gi|119598270|gb|EAW77864.1| leucine rich repeat containing 49, isoform CRA_a [Homo sapiens]
Length = 642
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 64 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 120
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 121 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 180
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 181 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 240
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 241 SWYKHTV 247
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 71 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 130
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 131 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 190
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 191 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 240
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 241 -SWYKHTVLQNMMQLRQL 257
>gi|67969217|dbj|BAE00962.1| unnamed protein product [Macaca fascicularis]
Length = 590
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 108 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMMQLRQL 301
>gi|426379596|ref|XP_004056478.1| PREDICTED: leucine-rich repeat-containing protein 49 [Gorilla
gorilla gorilla]
Length = 670
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 150 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 206
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 207 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 266
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 267 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 326
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 327 SWYKHTV 333
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 157 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 216
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 217 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 276
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 277 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 326
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 327 -SWYKHTVLQNMMQLRQL 343
>gi|440781277|ref|ZP_20959619.1| putative surface protein [Clostridium pasteurianum DSM 525]
gi|440220882|gb|ELP60088.1| putative surface protein [Clostridium pasteurianum DSM 525]
Length = 458
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 134/238 (56%), Gaps = 4/238 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E + L N I I + L L+ L L N++ I +L L NL+ L L+FN + +I
Sbjct: 207 LETIYLENNQISDISPLKGLANLQILGLKKNRINDINSLKGLSNLKTLALNFNEVSDINV 266
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+NL + L SNKIS I ++ LK L+ L L NKI+ I L LTNL+++ L N+
Sbjct: 267 LKELSNLYSVDLQSNKISDISSLKDLKNLQYLYLESNKIKDISILKNLTNLQDISLESNE 326
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT-QLYLSENGLTTIENLLSNEKLET 239
I I ++ +LTKLN L L N++ I L LTNL +L L N +T ++ L KL+
Sbjct: 327 IDDISSINNLTKLNSLILSNNQISDISALSQLTNLQFKLDLEGNNITDVKPLKGLVKLQN 386
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L + NK+S + + LT LQ + +NQ+SD +N L+ +LQ ++L N ++ D
Sbjct: 387 LVLNSNKLSNLSGLDSLTNLQILELKNNQISD---INPLKKMSRLQYLFLQGNKISVD 441
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 113/185 (61%)
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELG 155
I ++ LINL++L+LS N+I++I + +L LE +YL +N+IS I + L L++L L
Sbjct: 176 ISGIENLINLQVLNLSRNQIKDINAIGNLTKLETIYLENNQISDISPLKGLANLQILGLK 235
Query: 156 DNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNL 215
N+I I +L GL+NL+ L L N++S I+ L L+ L + LQ N++ I +L+ L NL
Sbjct: 236 KNRINDINSLKGLSNLKTLALNFNEVSDINVLKELSNLYSVDLQSNKISDISSLKDLKNL 295
Query: 216 TQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV 275
LYL N + I L + L+ + + N+I I +I +LT+L +++NQ+SD + +
Sbjct: 296 QYLYLESNKIKDISILKNLTNLQDISLESNEIDDISSINNLTKLNSLILSNNQISDISAL 355
Query: 276 NVLEN 280
+ L N
Sbjct: 356 SQLTN 360
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEI-LDLSFNRIREIK 119
++ + L N I I +I+ LT L L L +NQ++ I L L NL+ LDL N I ++K
Sbjct: 317 LQDISLESNEIDDISSINNLTKLNSLILSNNQISDISALSQLTNLQFKLDLEGNNITDVK 376
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L L+ L L SNK+S + +D L L++LEL +N+I I L ++ L+ L+L N
Sbjct: 377 PLKGLVKLQNLVLNSNKLSNLSGLDSLTNLQILELKNNQISDINPLKKMSRLQYLFLQGN 436
Query: 180 KISRIDNLASLTK 192
KIS +DN +L K
Sbjct: 437 KIS-VDNQQALKK 448
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 78/136 (57%), Gaps = 3/136 (2%)
Query: 159 IRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
I+ I ++ L NL+ L L +N+I I+ + +LTKL + L+ N++ I L+ L NL L
Sbjct: 173 IKDISGIENLINLQVLNLSRNQIKDINAIGNLTKLETIYLENNQISDISPLKGLANLQIL 232
Query: 219 YLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
L +N + I +L L+TL + +N++S I + L+ L + N++SD +++ L
Sbjct: 233 GLKKNRINDINSLKGLSNLKTLALNFNEVSDINVLKELSNLYSVDLQSNKISDISSLKDL 292
Query: 279 ENNKQLQTIYLDRNPV 294
+N LQ +YL+ N +
Sbjct: 293 KN---LQYLYLESNKI 305
>gi|395822437|ref|XP_003784524.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 3
[Otolemur garnettii]
Length = 752
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 114/187 (60%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 174 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 230
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L++L L L+ N L+ ++NL + L
Sbjct: 231 KNRIKKISNLENLKSLDVLDLHGNQITKIENVNHLSDLRVLNLARNFLSHVDNLNGLDSL 290
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 291 TELNLRHNQITFVKDVDNLPCLQRLFLSFNNISSFDSVSCLADSTSLSDISFDGNPIAQE 350
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 351 SWYKHTV 357
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 118/199 (59%), Gaps = 14/199 (7%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 181 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 240
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 241 ENLKSLDVLDLHGNQITKIENVNHLSDLRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 300
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLY-LSENGLTTIENLLSNEKLETL 240
+ + ++ +L L L L N + + +++ L + T L +S +G N ++ E
Sbjct: 301 TFVKDVDNLPCLQRLFLSFNNISSFDSVSCLADSTSLSDISFDG-----NPIAQE----- 350
Query: 241 DVAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 351 --SWYKHTVLQNMMQLRQL 367
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 113/211 (53%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 180 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISN 239
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L++L L L +N +S +DNL L L L+L+ N+
Sbjct: 240 LENLKSLDVLDLHGNQITKIENVNHLSDLRVLNLARNFLSHVDNLNGLDSLTELNLRHNQ 299
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ +++++ L L +L+LS N +++ ++ + +A T L +
Sbjct: 300 ITFVKDVDNLPCLQRLFLSFNNISSFDS-------------------VSCLADSTSLSDI 340
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 341 SFDGNPIAQESWYKHTVLQNMMQLRQLDMKR 371
>gi|297697007|ref|XP_002825665.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
protein 49 [Pongo abelii]
Length = 728
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 150 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 206
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 207 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 266
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 267 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 326
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 327 SWYKHTV 333
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 157 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 216
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 217 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 276
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 277 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 326
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 327 -SWYKHTVLQNMMQLRQL 343
>gi|196002395|ref|XP_002111065.1| hypothetical protein TRIADDRAFT_54619 [Trichoplax adhaerens]
gi|190587016|gb|EDV27069.1| hypothetical protein TRIADDRAFT_54619 [Trichoplax adhaerens]
Length = 692
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 98/147 (66%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L+ N I+KI+N+ ML L ++LYDN L I NL+++ L +L L NRI++I+ LD L+
Sbjct: 169 LQHNSIQKIDNLSMLKRLIFIDLYDNDLDEIANLESVRFLRVLMLGKNRIKQIRNLDQLS 228
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
L+ L L N+IS+IEN++HL +L+VL L N+I + N+ GL +L+EL L KN+I+++D
Sbjct: 229 KLDVLDLHCNQISRIENLNHLTELRVLNLAGNQISYVSNIGGLCSLQELNLRKNQITKVD 288
Query: 186 NLASLTKLNILSLQCNRLRTIENLEAL 212
+ L KL L L N++ + + ++
Sbjct: 289 EVNLLPKLQRLFLDHNKIASFSHASSV 315
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 116/201 (57%), Gaps = 3/201 (1%)
Query: 103 INLEILDLSFNRIREIKGL--DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIR 160
I ++ L+L ++ I L DH+ NL+ L L N I KI+N+ LK+L ++L DN +
Sbjct: 139 ITVDRLNLDRRGLKSIPALIEDHI-NLKLLNLQHNSIQKIDNLSMLKRLIFIDLYDNDLD 197
Query: 161 IIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYL 220
I NL+ + L L LGKN+I +I NL L+KL++L L CN++ IENL LT L L L
Sbjct: 198 EIANLESVRFLRVLMLGKNRIKQIRNLDQLSKLDVLDLHCNQISRIENLNHLTELRVLNL 257
Query: 221 SENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ N ++ + N+ L+ L++ N+I+ + + L +LQ +++ N+++ ++ + +
Sbjct: 258 AGNQISYVSNIGGLCSLQELNLRKNQITKVDEVNLLPKLQRLFLDHNKIASFSHASSVLK 317
Query: 281 NKQLQTIYLDRNPVAQDPNYR 301
L + L+ NP+ Q YR
Sbjct: 318 CGALIELTLEDNPMIQSSKYR 338
>gi|403341307|gb|EJY69954.1| Leucine Rich Repeat family protein [Oxytricha trifallax]
Length = 723
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 9/291 (3%)
Query: 27 NTHGNQMSL-DNPDEESEAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKE 85
N +G+ +L NP + + + EDE R LL+ +++++E+ + E
Sbjct: 96 NVYGSNPNLVTNPQSKIDVQKLSQNEEDERY------RYLLKNGIVRRVEDEDKII-FAE 148
Query: 86 LELYDNQLTVIENLDTL-INLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVD 144
L L V N E L+L + + L+ L L L N I+KIEN+
Sbjct: 149 LPQIPGVLVVYRKPSERNANPERLNLDKRELTHMPLLEGEEKLRLLNLQHNHITKIENLV 208
Query: 145 HLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR 204
L L L+L +N+I+ I +L + L L LGKN I RI NL +L KL++L L N++
Sbjct: 209 SLPNLIFLDLYNNQIKEISHLHTVPTLRVLMLGKNYIERIRNLQNLNKLDVLDLHSNKIS 268
Query: 205 TIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWI 264
IEN+ L+ L L L+ N +T++ENL L L++ N I + + H LQ ++
Sbjct: 269 KIENINHLSELRVLNLANNMITSVENLNGLISLTELNLRRNMIDTVSGLQHCPRLQRIFL 328
Query: 265 NDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQID 315
++N++ + + L++ QLQ + LD NPV + Y CP + +D
Sbjct: 329 SNNRIDKFENIGSLKDASQLQELALDGNPVFHNKGYFEFCLTTCPNLKHLD 379
>gi|296213600|ref|XP_002753341.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 2
[Callithrix jacchus]
Length = 686
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 113/187 (60%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
IKG +HL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 108 IKGEEHL---RLLNFQHNFITRIQNLSNLQKLISLDLCDNQIEEISGLSTLRCLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L++N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLAKNFLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++++ L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSISCLADSSSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+N+ L L L+L DNQ+ I L TL L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNLSNLQKLISLDLCDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLAKNFLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQHLFLSFNNISSFDSISCLADSSSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMMQLRQL 301
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 22/138 (15%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
C+ LLL N IKKI N+ L +L L+L+ NQ+T IEN
Sbjct: 157 CLRVLLLGKNRIKKISNLENLKSLDVLDLHGNQITKIEN--------------------- 195
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
++HL L L L N +S ++N++ L L L L N+I + ++D L L+ L+L N
Sbjct: 196 -INHLCELRVLNLAKNFLSHVDNLNGLDSLTELNLRHNQITFVRDVDNLPCLQHLFLSFN 254
Query: 180 KISRIDNLASLTKLNILS 197
IS D+++ L + LS
Sbjct: 255 NISSFDSISCLADSSSLS 272
>gi|428225640|ref|YP_007109737.1| hypothetical protein GEI7407_2206 [Geitlerinema sp. PCC 7407]
gi|427985541|gb|AFY66685.1| leucine-rich repeat-containing protein [Geitlerinema sp. PCC 7407]
Length = 504
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 135/257 (52%), Gaps = 15/257 (5%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L L N I ++ + L+ L L NQLT + + + L+ LDLSFN+I ++
Sbjct: 251 LESLNLANNAIASLQFGGQIPALRRLSLASNQLTEVRAIASQPQLQELDLSFNQITDLGP 310
Query: 121 LDHLANLEKLYLCSNK-ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L + L + N+ IS + + L L+ L+L + IR I L GL NLE L L N
Sbjct: 311 LASLGAIRVLKISGNRPISDLRPLAGLTTLQALDLSEASIRDITPLRGLRNLETLVLSGN 370
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
+I ++++L+ L +L+ L++ N++ + + AL +L L L N +T++ L S +L+
Sbjct: 371 QIQQLESLSGLNRLSYLAIGGNQISDLRAIAALYSLQTLMLDSNRITSVRPLASLGQLKV 430
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPN 299
L + N+I+ +A LT L + N++++++ + L N L+ + L NPV+
Sbjct: 431 LTLGNNQITDPAPLAALTGLTVLQLPQNRITNFDALATLTN---LRILGLWENPVSPP-- 485
Query: 300 YRRKIKLVCPWIVQIDA 316
VCP VQ D+
Sbjct: 486 -------VCP--VQPDS 493
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 110/213 (51%), Gaps = 4/213 (1%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L L L LY++ L+ + L +L NL LDLS+ + ++ L L L+ L L N +
Sbjct: 95 LPQLTGLSLYNSSLSDLRPLSSLPNLRALDLSYANLTDVTVLGTLGTLQALNLRGNPVRD 154
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
+ + L++L L LG + + + L L NL +L L +++ I +LA +L L+L
Sbjct: 155 LRPLQGLQRLHTLTLGWSTVTDLSTLPTLPNLHQLDLSGSQVGDIRSLAPQPRLETLNLS 214
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
NR+ +I L A+ +L L L N LT + S KLE+L++A N I+ +Q + L
Sbjct: 215 ANRISSIA-LPAMPSLRSLDLENNALTRVTIPASMGKLESLNLANNAIASLQFGGQIPAL 273
Query: 260 QEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
+ + NQ+++ V + + QLQ + L N
Sbjct: 274 RRLSLASNQLTE---VRAIASQPQLQELDLSFN 303
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 121/271 (44%), Gaps = 47/271 (17%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
LR N ++ + + L L L L + +T + L TL NL LDLS +++ +I+ L
Sbjct: 147 LRGNPVRDLRPLQGLQRLHTLTLGWSTVTDLSTLPTLPNLHQLDLSGSQVGDIRSLAPQP 206
Query: 126 NLEKLYLCSNKIS------------------------------KIENVD----------- 144
LE L L +N+IS K+E+++
Sbjct: 207 RLETLNLSANRISSIALPAMPSLRSLDLENNALTRVTIPASMGKLESLNLANNAIASLQF 266
Query: 145 --HLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+ L+ L L N++ + + L+EL L N+I+ + LASL + +L + NR
Sbjct: 267 GGQIPALRRLSLASNQLTEVRAIASQPQLQELDLSFNQITDLGPLASLGAIRVLKISGNR 326
Query: 203 -LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQE 261
+ + L LT L L LSE + I L LETL ++ N+I +++++ L L
Sbjct: 327 PISDLRPLAGLTTLQALDLSEASIRDITPLRGLRNLETLVLSGNQIQQLESLSGLNRLSY 386
Query: 262 FWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
I NQ+SD + L + LQT+ LD N
Sbjct: 387 LAIGGNQISDLRAIAALYS---LQTLMLDSN 414
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 103/196 (52%), Gaps = 2/196 (1%)
Query: 77 IHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNK 136
+ L TL+ L L N + + L L L L L ++ + ++ L L NL +L L ++
Sbjct: 136 LGTLGTLQALNLRGNPVRDLRPLQGLQRLHTLTLGWSTVTDLSTLPTLPNLHQLDLSGSQ 195
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
+ I ++ +L+ L L N+I I L + +L L L N ++R+ AS+ KL L
Sbjct: 196 VGDIRSLAPQPRLETLNLSANRISSIA-LPAMPSLRSLDLENNALTRVTIPASMGKLESL 254
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
+L N + +++ + L +L L+ N LT + + S +L+ LD+++N+I+ + +A L
Sbjct: 255 NLANNAIASLQFGGQIPALRRLSLASNQLTEVRAIASQPQLQELDLSFNQITDLGPLASL 314
Query: 257 TELQEFWINDNQ-VSD 271
++ I+ N+ +SD
Sbjct: 315 GAIRVLKISGNRPISD 330
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 10/201 (4%)
Query: 108 LDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG 167
LDL + ++ L L L L L ++ +S + + L L+ L+L + + L
Sbjct: 79 LDLGGRGLTDLSPLVSLPQLTGLSLYNSSLSDLRPLSSLPNLRALDLSYANLTDVTVLGT 138
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
L L+ L L N + + L L +L+ L+L + + + L L NL QL LS + +
Sbjct: 139 LGTLQALNLRGNPVRDLRPLQGLQRLHTLTLGWSTVTDLSTLPTLPNLHQLDLSGSQVGD 198
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
I +L +LETL+++ N+IS I + + L+ + +N ++ V + + +L+++
Sbjct: 199 IRSLAPQPRLETLNLSANRISSIA-LPAMPSLRSLDLENNALTR---VTIPASMGKLESL 254
Query: 288 YLDRNPVA------QDPNYRR 302
L N +A Q P RR
Sbjct: 255 NLANNAIASLQFGGQIPALRR 275
>gi|291411710|ref|XP_002722130.1| PREDICTED: leucine rich repeat containing 49-like [Oryctolagus
cuniculus]
Length = 752
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 112/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 174 INGEEHL---RLLNFQHNFITRIQNLSNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 230
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 231 KNRIKKISNLENLKNLDVLDLHGNQITKIENVSHLCDLRVLNLARNLLSHVDNLNGLDSL 290
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+IS ++++ +L LQ +++ N +S +++V+ L + L I D NP+AQ+
Sbjct: 291 TELNLRHNQISFVRDVDNLPSLQRLFLSFNNISSFDSVSCLADATSLSDITFDGNPIAQE 350
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 351 SWYKHTV 357
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+N+ L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 181 RLLNFQHNFITRIQNLSNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 240
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIENV HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 241 ENLKNLDVLDLHGNQITKIENVSHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 300
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
S + ++ +L L L L N + + +++ L + T L + +T N ++ E
Sbjct: 301 SFVRDVDNLPSLQRLFLSFNNISSFDSVSCLADATSL----SDITFDGNPIAQE------ 350
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 351 -SWYKHTVLQNMMQLRQL 367
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+NL L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 180 LRLLNFQHNFITRIQNLSNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISN 239
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN+ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 240 LENLKNLDVLDLHGNQITKIENVSHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQ 299
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L +L +L+LS N +++ ++ + +A T L +
Sbjct: 300 ISFVRDVDNLPSLQRLFLSFNNISSFDS-------------------VSCLADATSLSDI 340
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 341 TFDGNPIAQESWYKHTVLQNMMQLRQLDMKR 371
>gi|363737906|ref|XP_413778.3| PREDICTED: leucine-rich repeat-containing protein 49 [Gallus
gallus]
Length = 822
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 101/157 (64%), Gaps = 1/157 (0%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 254 RLLNFQHNFITRIQNISNLQHLVFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 313
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIEN++HL +L+VL L N + I+ENL+GL +L EL L N++
Sbjct: 314 ENLKNLDVLDLHGNQITKIENINHLSELRVLNLARNLLSIVENLNGLDSLTELNLRHNQV 373
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
S I ++ +L +L L L N + + E++ L + + L
Sbjct: 374 SAIKDVDTLPRLQRLFLSFNNISSFEDILCLADSSSL 410
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+ L L+L DN+I I L L +L L LG
Sbjct: 247 INGEDHL---RLLNFQHNFITRIQNISNLQHLVFLDLYDNQIEEISGLSTLRSLRVLLLG 303
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L+ L L L+ N L+ +ENL + L
Sbjct: 304 KNRIKKISNLENLKNLDVLDLHGNQITKIENINHLSELRVLNLARNLLSIVENLNGLDSL 363
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N++S I+++ L LQ +++ N +S + + L ++ L I LD NP+AQ+
Sbjct: 364 TELNLRHNQVSAIKDVDTLPRLQRLFLSFNNISSFEDILCLADSSSLSDITLDGNPIAQE 423
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 424 TWYKHTV 430
>gi|344284202|ref|XP_003413858.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 2
[Loxodonta africana]
Length = 693
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 114 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 170
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 171 KNRIRKISNLENLKSLDVLDLHGNQITKIENVSHLCDLRVLNLARNLLSHVDNLNGLDSL 230
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+IS ++++ +L LQ +++ N +S + V+ L ++ L I D NP+AQ+
Sbjct: 231 TELNLRHNQISFVRDVDNLPCLQRLFLSFNNISSFENVSCLADSSSLSDITFDGNPIAQE 290
Query: 298 PNYRRKI 304
Y+ I
Sbjct: 291 SWYKHTI 297
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRIR+I L
Sbjct: 121 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIRKISNL 180
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 181 ENLKSLDVLDLHGNQITKIENVSHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 240
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
S + ++ +L L L L N + + EN+ L + + L + +T N ++ E
Sbjct: 241 SFVRDVDNLPCLQRLFLSFNNISSFENVSCLADSSSL----SDITFDGNPIAQE------ 290
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +I+QN+ L +L
Sbjct: 291 -SWYKHTILQNMMQLRQL 307
>gi|403276042|ref|XP_003929726.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 2
[Saimiri boliviensis boliviensis]
Length = 642
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 113/187 (60%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
IKG +HL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 64 IKGEEHL---RLLNFQHNFITRIQNLSNLQKLISLDLCDNQIEEISGLSTLRCLRVLLLG 120
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L++N L+ ++NL + L
Sbjct: 121 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLAKNFLSHVDNLNGLDSL 180
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++++ L ++ L I D NP+AQ+
Sbjct: 181 IELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSISCLADSSSLSDITFDGNPIAQE 240
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 241 SWYKHTV 247
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+N+ L L L+L DNQ+ I L TL L +L L NRI++I L
Sbjct: 71 RLLNFQHNFITRIQNLSNLQKLISLDLCDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 130
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 131 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLAKNFLSHVDNLNGLDSLIELNLRHNQI 190
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 191 TFVRDVDNLPCLQHLFLSFNNISSFDSISCLADSSSL----SDITFDGNPIAQE------ 240
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 241 -SWYKHTVLQNMMQLRQL 257
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 22/138 (15%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
C+ LLL N IKKI N+ L +L L+L+ NQ+T IEN
Sbjct: 113 CLRVLLLGKNRIKKISNLENLKSLDVLDLHGNQITKIEN--------------------- 151
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
++HL L L L N +S ++N++ L L L L N+I + ++D L L+ L+L N
Sbjct: 152 -INHLCELRVLNLAKNFLSHVDNLNGLDSLIELNLRHNQITFVRDVDNLPCLQHLFLSFN 210
Query: 180 KISRIDNLASLTKLNILS 197
IS D+++ L + LS
Sbjct: 211 NISSFDSISCLADSSSLS 228
>gi|344284204|ref|XP_003413859.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 3
[Loxodonta africana]
Length = 643
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 64 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 120
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 121 KNRIRKISNLENLKSLDVLDLHGNQITKIENVSHLCDLRVLNLARNLLSHVDNLNGLDSL 180
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+IS ++++ +L LQ +++ N +S + V+ L ++ L I D NP+AQ+
Sbjct: 181 TELNLRHNQISFVRDVDNLPCLQRLFLSFNNISSFENVSCLADSSSLSDITFDGNPIAQE 240
Query: 298 PNYRRKI 304
Y+ I
Sbjct: 241 SWYKHTI 247
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRIR+I L
Sbjct: 71 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIRKISNL 130
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 131 ENLKSLDVLDLHGNQITKIENVSHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 190
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
S + ++ +L L L L N + + EN+ L + + L + +T N ++ E
Sbjct: 191 SFVRDVDNLPCLQRLFLSFNNISSFENVSCLADSSSL----SDITFDGNPIAQE------ 240
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +I+QN+ L +L
Sbjct: 241 -SWYKHTILQNMMQLRQL 257
>gi|344284200|ref|XP_003413857.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 1
[Loxodonta africana]
Length = 687
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 165 KNRIRKISNLENLKSLDVLDLHGNQITKIENVSHLCDLRVLNLARNLLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+IS ++++ +L LQ +++ N +S + V+ L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQISFVRDVDNLPCLQRLFLSFNNISSFENVSCLADSSSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ I
Sbjct: 285 SWYKHTI 291
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRIR+I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIRKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENVSHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
S + ++ +L L L L N + + EN+ L + + L + +T N ++ E
Sbjct: 235 SFVRDVDNLPCLQRLFLSFNNISSFENVSCLADSSSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +I+QN+ L +L
Sbjct: 285 -SWYKHTILQNMMQLRQL 301
>gi|156397309|ref|XP_001637834.1| predicted protein [Nematostella vectensis]
gi|156224949|gb|EDO45771.1| predicted protein [Nematostella vectensis]
Length = 618
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 117/231 (50%), Gaps = 22/231 (9%)
Query: 85 ELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVD 144
L L +LTV L+ NL +L+ N IR I+ HLANL +L
Sbjct: 31 RLNLDRRRLTVCPILEGEDNLRLLNFQHNLIRNIQ---HLANLRRLIF------------ 75
Query: 145 HLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR 204
L++ DN+I I L L +L L LGKN+I +I+NL +LTKL++L L NR+
Sbjct: 76 -------LDIYDNQIEEISGLSSLKSLRVLMLGKNRIRKINNLEALTKLDVLDLHGNRIS 128
Query: 205 TIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWI 264
IENL LT L L L+ N + + N+ L L++ NKI ++ + L+ LQ ++
Sbjct: 129 KIENLSHLTELRVLNLAGNEILKVCNISGMRSLAELNLRRNKICTVEEVDRLSNLQRLFL 188
Query: 265 NDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQID 315
+ N +S + +N L + + + LD NP A D Y++ + + Q+D
Sbjct: 189 SFNCISRFEDINCLTRSTSITELSLDGNPFASDVTYKQTVLKSVTCLRQLD 239
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 102/170 (60%), Gaps = 6/170 (3%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + NLI+ I+++ L L L++YDNQ+ I L +L +L +L L NRIR+I L
Sbjct: 52 RLLNFQHNLIRNIQHLANLRRLIFLDIYDNQIEEISGLSSLKSLRVLMLGKNRIRKINNL 111
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
+ L L+ L L N+ISKIEN+ HL +L+VL L N+I + N+ G+ +L EL L +NKI
Sbjct: 112 EALTKLDVLDLHGNRISKIENLSHLTELRVLNLAGNEILKVCNISGMRSLAELNLRRNKI 171
Query: 182 S---RIDNLASLTKLNILSLQC-NRLRTIENLEALTNLTQLYLSENGLTT 227
+D L++L +L LS C +R I L T++T+L L N +
Sbjct: 172 CTVEEVDRLSNLQRL-FLSFNCISRFEDINCLTRSTSITELSLDGNPFAS 220
>gi|332236041|ref|XP_003267214.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
protein 49 [Nomascus leucogenys]
Length = 690
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+ DN+I I L L L L LG
Sbjct: 112 INGEDHL---RLLNFQHNFITQIQNISNLQKLISLDFYDNQIEEISGLSTLRCLRVLLLG 168
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 169 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 228
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 229 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQE 288
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 289 SWYKHTV 295
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+ YDNQ+ I L TL L +L L NRI++I L
Sbjct: 119 RLLNFQHNFITQIQNISNLQKLISLDFYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 178
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 179 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 238
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 239 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 288
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 289 -SWYKHTVLQNMMQLRQL 305
>gi|403276040|ref|XP_003929725.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 1
[Saimiri boliviensis boliviensis]
Length = 686
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 113/187 (60%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
IKG +HL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 108 IKGEEHL---RLLNFQHNFITRIQNLSNLQKLISLDLCDNQIEEISGLSTLRCLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L++N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLAKNFLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++++ L ++ L I D NP+AQ+
Sbjct: 225 IELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSISCLADSSSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+N+ L L L+L DNQ+ I L TL L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNLSNLQKLISLDLCDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLAKNFLSHVDNLNGLDSLIELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQHLFLSFNNISSFDSISCLADSSSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMMQLRQL 301
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 22/138 (15%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
C+ LLL N IKKI N+ L +L L+L+ NQ+T IEN
Sbjct: 157 CLRVLLLGKNRIKKISNLENLKSLDVLDLHGNQITKIEN--------------------- 195
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
++HL L L L N +S ++N++ L L L L N+I + ++D L L+ L+L N
Sbjct: 196 -INHLCELRVLNLAKNFLSHVDNLNGLDSLIELNLRHNQITFVRDVDNLPCLQHLFLSFN 254
Query: 180 KISRIDNLASLTKLNILS 197
IS D+++ L + LS
Sbjct: 255 NISSFDSISCLADSSSLS 272
>gi|15896525|ref|NP_349874.1| ChW repeat-containing protein [Clostridium acetobutylicum ATCC 824]
gi|337738484|ref|YP_004637931.1| ChW repeat-containing protein [Clostridium acetobutylicum DSM 1731]
gi|384459994|ref|YP_005672414.1| putative surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum EA 2018]
gi|15026357|gb|AAK81214.1|AE007824_3 Possible surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum ATCC 824]
gi|325510683|gb|ADZ22319.1| putative surface protein, responsible for cell interaction;
contains cell adhesion domain and ChW-repeats
[Clostridium acetobutylicum EA 2018]
gi|336293297|gb|AEI34431.1| ChW repeat-containing protein [Clostridium acetobutylicum DSM 1731]
Length = 849
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 127/235 (54%), Gaps = 3/235 (1%)
Query: 62 ERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
+RL L N + + I L+ L EL+L + L+ + L + L+ L+LS N+I +I L
Sbjct: 579 QRLDLYGNALNTFDGIKNLSNLTELDLSNTNLSSLAFLSVVTKLQNLNLSSNKIADISAL 638
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
+L NL +L L +N+IS I ++++L L +L L NKI I +L L L+ L L N I
Sbjct: 639 SNLTNLNQLDLSTNQISNISSLNNLIGLNILNLNSNKINDISSLTNLKQLQTLSLNSNTI 698
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
ID L + T LN+L L N++ I L L +L + LS N +T I L + + L
Sbjct: 699 QDIDVLKNFTVLNVLGLSNNKITDISTLANLNSLKNISLSNNQITNISCLCNLTNAQYLH 758
Query: 242 VAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ 296
+ N+I+ I + L L ++N+NQ++D + L+ +L T+YL N + +
Sbjct: 759 LENNQINDISALNKLKNLAYLYLNNNQITDITALGFLD---KLNTLYLSYNKITK 810
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 120/210 (57%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N I I + LT L +L+L NQ++ I +L+ LI L IL+L+ N+I +I
Sbjct: 622 LQNLNLSSNKIADISALSNLTNLNQLDLSTNQISNISSLNNLIGLNILNLNSNKINDISS 681
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L L+ L L SN I I+ + + L VL L +NKI I L L +L+ + L N+
Sbjct: 682 LTNLKQLQTLSLNSNTIQDIDVLKNFTVLNVLGLSNNKITDISTLANLNSLKNISLSNNQ 741
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ I L +LT L L+ N++ I L L NL LYL+ N +T I L +KL TL
Sbjct: 742 ITNISCLCNLTNAQYLHLENNQINDISALNKLKNLAYLYLNNNQITDITALGFLDKLNTL 801
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVS 270
++YNKI+ + ++ +LT L+ + +N ++
Sbjct: 802 YLSYNKITKVDSLKNLTNLKILILAENNIT 831
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 128/235 (54%), Gaps = 3/235 (1%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
++ L L N I + + L L+ L L +N++T L +L +L+ LDL N +
Sbjct: 533 SLDTLYLNSNSISNLTPLRSLINLQNLYLGNNKITDTTALSSLSSLQRLDLYGNALNTFD 592
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
G+ +L+NL +L L + +S + + + KL+ L L NKI I L LTNL +L L N
Sbjct: 593 GIKNLSNLTELDLSNTNLSSLAFLSVVTKLQNLNLSSNKIADISALSNLTNLNQLDLSTN 652
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLET 239
+IS I +L +L LNIL+L N++ I +L L L L L+ N + I+ L + L
Sbjct: 653 QISNISSLNNLIGLNILNLNSNKINDISSLTNLKQLQTLSLNSNTIQDIDVLKNFTVLNV 712
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
L ++ NKI+ I +A+L L+ +++NQ+++ ++ L N Q ++L+ N +
Sbjct: 713 LGLSNNKITDISTLANLNSLKNISLSNNQITN---ISCLCNLTNAQYLHLENNQI 764
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 110/202 (54%), Gaps = 6/202 (2%)
Query: 93 LTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVL 152
LT IENL +L + L L+ N I + L L NL+ LYL +NKI+ + L L+ L
Sbjct: 525 LTGIENLKSL---DTLYLNSNSISNLTPLRSLINLQNLYLGNNKITDTTALSSLSSLQRL 581
Query: 153 ELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEAL 212
+L N + + + L+NL EL L +S + L+ +TKL L+L N++ I L L
Sbjct: 582 DLYGNALNTFDGIKNLSNLTELDLSNTNLSSLAFLSVVTKLQNLNLSSNKIADISALSNL 641
Query: 213 TNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDW 272
TNL QL LS N ++ I +L + L L++ NKI+ I ++ +L +LQ +N N + D
Sbjct: 642 TNLNQLDLSTNQISNISSLNNLIGLNILNLNSNKINDISSLTNLKQLQTLSLNSNTIQD- 700
Query: 273 NTVNVLENNKQLQTIYLDRNPV 294
++VL+N L + L N +
Sbjct: 701 --IDVLKNFTVLNVLGLSNNKI 720
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 118/224 (52%), Gaps = 3/224 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I + I L +L L L N ++ + L +LINL+ L L N+I + L L++L++L
Sbjct: 522 ITDLTGIENLKSLDTLYLNSNSISNLTPLRSLINLQNLYLGNNKITDTTALSSLSSLQRL 581
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N ++ + + +L L L+L + + + L +T L+ L L NKI+ I L++L
Sbjct: 582 DLYGNALNTFDGIKNLSNLTELDLSNTNLSSLAFLSVVTKLQNLNLSSNKIADISALSNL 641
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T LN L L N++ I +L L L L L+ N + I +L + ++L+TL + N I I
Sbjct: 642 TNLNQLDLSTNQISNISSLNNLIGLNILNLNSNKINDISSLTNLKQLQTLSLNSNTIQDI 701
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
+ + T L +++N+++D ++ L N L+ I L N +
Sbjct: 702 DVLKNFTVLNVLGLSNNKITD---ISTLANLNSLKNISLSNNQI 742
>gi|351714330|gb|EHB17249.1| Leucine-rich repeat-containing protein 49 [Heterocephalus glaber]
Length = 686
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 112/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ +NL + L
Sbjct: 165 KNRIKKISNLENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHADNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPSLQRLFLSFNNISSFDSVSCLADSTSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIENV+HL L+VL L N + +NL+GL +L EL L N+I
Sbjct: 175 ENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHADNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + T L + +T N ++ E
Sbjct: 235 TFVRDVDNLPSLQRLFLSFNNISSFDSVSCLADSTSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMTQLRQL 301
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 121/239 (50%), Gaps = 21/239 (8%)
Query: 55 ESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNR 114
E K +C +RL L + I L+ L N +T I+N+ L L LDL N+
Sbjct: 86 EEKILCSDRLTLERQKLTVCPIIDGEEHLRLLNFQHNFITRIQNISNLQRLIFLDLYDNQ 145
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI GL L +L L L N+I KI N+++LK L VL+L N+I IEN++ L +L L
Sbjct: 146 IEEISGLSTLRSLRVLLLGKNRIKKISNLENLKNLDVLDLHGNQITKIENVNHLCDLRVL 205
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L +N +S DNL L L L+L+ N++ + +++ L +L +L+LS N +++ ++
Sbjct: 206 NLARNLLSHADNLNGLDSLTELNLRHNQITFVRDVDNLPSLQRLFLSFNNISSFDS---- 261
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ +A T L + + N ++ W VL+N QL+ + + R
Sbjct: 262 ---------------VSCLADSTSLSDITFDGNPIAQESWYKHTVLQNMTQLRQLDMKR 305
>gi|428218009|ref|YP_007102474.1| hypothetical protein Pse7367_1768 [Pseudanabaena sp. PCC 7367]
gi|427989791|gb|AFY70046.1| hypothetical protein Pse7367_1768 [Pseudanabaena sp. PCC 7367]
Length = 337
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 115/216 (53%), Gaps = 3/216 (1%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L TL EL+L D Q+T I L +L L L+LS N I+++ L L NL L ++S
Sbjct: 87 LATLTELDLSDRQITDISTLRSLPQLTYLNLSHNTIKDLSPLAELTNLRALVWRHGQLSD 146
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
+ + L L L+L DN I +E L L NL L L +NKI + L +LTKL L L
Sbjct: 147 LTALASLTNLSDLQLSDNAIEDLEPLQSLENLRSLQLSQNKIKDLSPLETLTKLEKLELN 206
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N + ++ L LTNLT L + EN + +E L S +L+ L N+IS I +A L L
Sbjct: 207 SNLISELDPLAGLTNLTSLNIGENQIKNLEPLRSLTQLDRLYAHKNQISNISALADLVNL 266
Query: 260 QEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
QE + +NQ+ D V L++ QL + L N ++
Sbjct: 267 QEVILFENQIED---VTPLKSLTQLTRLELGANQIS 299
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 103/173 (59%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+ R + + + LT L +L+L DN + +E L +L NL L LS N+I+++
Sbjct: 134 LRALVWRHGQLSDLTALASLTNLSDLQLSDNAIEDLEPLQSLENLRSLQLSQNKIKDLSP 193
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L LEKL L SN IS+++ + L L L +G+N+I+ +E L LT L+ LY KN+
Sbjct: 194 LETLTKLEKLELNSNLISELDPLAGLTNLTSLNIGENQIKNLEPLRSLTQLDRLYAHKNQ 253
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLS 233
IS I LA L L + L N++ + L++LT LT+L L N ++++E+L S
Sbjct: 254 ISNISALADLVNLQEVILFENQIEDVTPLKSLTQLTRLELGANQISSVEDLSS 306
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 113/208 (54%), Gaps = 7/208 (3%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N IK + + LT L+ L QL+ + L +L NL L LS N I +++ L L
Sbjct: 117 LSHNTIKDLSPLAELTNLRALVWRHGQLSDLTALASLTNLSDLQLSDNAIEDLEPLQSLE 176
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL L L NKI + ++ L KL+ LEL N I ++ L GLTNL L +G+N+I ++
Sbjct: 177 NLRSLQLSQNKIKDLSPLETLTKLEKLELNSNLISELDPLAGLTNLTSLNIGENQIKNLE 236
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L SLT+L+ L N++ I L L NL ++ L EN + + L S +L L++ N
Sbjct: 237 PLRSLTQLDRLYAHKNQISNISALADLVNLQEVILFENQIEDVTPLKSLTQLTRLELGAN 296
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWN 273
+IS +++++ L +N N++S W
Sbjct: 297 QISSVEDLSSL-------VNLNRLSLWG 317
>gi|7020071|dbj|BAA90984.1| unnamed protein product [Homo sapiens]
Length = 685
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 110/187 (58%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L+KL L+L DN+I I L L L L LG
Sbjct: 108 INGEDHL---RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S +++V+ L ++ L D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSLSDTTFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + T N ++ E
Sbjct: 235 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDTTFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMMQLRQL 301
>gi|414076287|ref|YP_006995605.1| hypothetical protein ANA_C11003 [Anabaena sp. 90]
gi|413969703|gb|AFW93792.1| leucine-rich repeat-containing protein [Anabaena sp. 90]
Length = 474
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 121/211 (57%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L L N I I+++ LT L +L+L NQ++ L L L LDL N+I +IK
Sbjct: 131 LTSLGLSKNKISDIKSLSNLTKLTKLDLVGNQISDTTPLSNLTKLTSLDLWGNQISDIKP 190
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L NL L L NKIS I+ + +L KL L L NKI I++L TNL +L L N+
Sbjct: 191 LSNLTNLTFLNLVGNKISDIKPLSNLTKLTSLGLSKNKISDIKSLSNFTNLTKLDLVGNQ 250
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS L++LTKL L L N++ I+ L LTNLT L L N ++ I+ L + L +L
Sbjct: 251 ISDTTPLSNLTKLTSLDLWGNQISDIKPLSNLTNLTFLILWGNQISNIKPLSNLTNLTSL 310
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
++ N+IS I+ +++LT L + N++SD
Sbjct: 311 TLSLNQISDIKPLSNLTNLTYLDLWGNKISD 341
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 118/211 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ +L L N I + LT L L+L+ NQ++ I+ L L NL L+L N+I +IK
Sbjct: 153 LTKLDLVGNQISDTTPLSNLTKLTSLDLWGNQISDIKPLSNLTNLTFLNLVGNKISDIKP 212
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L L L L NKIS I+++ + L L+L N+I L LT L L L N+
Sbjct: 213 LSNLTKLTSLGLSKNKISDIKSLSNFTNLTKLDLVGNQISDTTPLSNLTKLTSLDLWGNQ 272
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS I L++LT L L L N++ I+ L LTNLT L LS N ++ I+ L + L L
Sbjct: 273 ISDIKPLSNLTNLTFLILWGNQISNIKPLSNLTNLTSLTLSLNQISDIKPLSNLTNLTYL 332
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
D+ NKIS I+ +++LT L ++ N++SD
Sbjct: 333 DLWGNKISDIKPLSNLTNLTYLYLLSNKISD 363
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 124/249 (49%), Gaps = 25/249 (10%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I I+ + LT L L L N+++ I+ L L L L LS N+I +IK L + NL
Sbjct: 183 NQISDIKPLSNLTNLTFLNLVGNKISDIKPLSNLTKLTSLGLSKNKISDIKSLSNFTNLT 242
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
KL L N+IS + +L KL L+L N+I I+ L LTNL L L N+IS I L+
Sbjct: 243 KLDLVGNQISDTTPLSNLTKLTSLDLWGNQISDIKPLSNLTNLTFLILWGNQISNIKPLS 302
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK-- 246
+LT L L+L N++ I+ L LTNLT L L N ++ I+ L + L L + NK
Sbjct: 303 NLTNLTSLTLSLNQISDIKPLSNLTNLTYLDLWGNKISDIKPLSNLTNLTYLYLLSNKIS 362
Query: 247 --------------------ISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQT 286
IS I+ ++ LT L ++ NQ+SD + L N L +
Sbjct: 363 DIKPLSNLTNLTLLFLSLNQISDIKPLSSLTNLTFLILSKNQISD---IKPLSNLTNLTS 419
Query: 287 IYLDRNPVA 295
+ L N ++
Sbjct: 420 LGLSENKIS 428
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 130/257 (50%), Gaps = 25/257 (9%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L L N I I+++ T L +L+L NQ++ L L L LDL N+I +IK
Sbjct: 219 LTSLGLSKNKISDIKSLSNFTNLTKLDLVGNQISDTTPLSNLTKLTSLDLWGNQISDIKP 278
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L NL L L N+IS I+ + +L L L L N+I I+ L LTNL L L NK
Sbjct: 279 LSNLTNLTFLILWGNQISNIKPLSNLTNLTSLTLSLNQISDIKPLSNLTNLTYLDLWGNK 338
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIEN----------------------LEALTNLTQL 218
IS I L++LT L L L N++ I+ L +LTNLT L
Sbjct: 339 ISDIKPLSNLTNLTYLYLLSNKISDIKPLSNLTNLTLLFLSLNQISDIKPLSSLTNLTFL 398
Query: 219 YLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
LS+N ++ I+ L + L +L ++ NKIS I+ +++LT L + +N +SD + L
Sbjct: 399 ILSKNQISDIKPLSNLTNLTSLGLSENKISDIKPLSNLTNLTYLSLWENPISD---IKPL 455
Query: 279 ENNKQLQTIYLDRNPVA 295
N L +YL NP
Sbjct: 456 SNLTNLTELYLWENPFT 472
>gi|315301242|ref|ZP_07872475.1| internalin A [Listeria ivanovii FSL F6-596]
gi|313630386|gb|EFR98286.1| internalin A [Listeria ivanovii FSL F6-596]
Length = 595
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 124/235 (52%), Gaps = 3/235 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++RL N I I + +T+L +++ +N ++ + L L NLE L L N I +I
Sbjct: 99 LDRLYFGENNISDISQLSGVTSLTYVDVGENNISNLSPLANLTNLESLGLDKNNISDISN 158
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+ L L L N + + +V L LK L+ G N I + L L N+ LYL N
Sbjct: 159 LAGLSKLSNLSLNDNNLDNLSDVSGLINLKELKAGGNSISDLTPLSNLINMVSLYLADNN 218
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + LA LTK++ L+L N + I + T++ LYL EN +T I L + L L
Sbjct: 219 ISDLSPLAKLTKIDYLNLYTNNISNISVVANFTDIWGLYLGENNITDIAVLTNLTGLGEL 278
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+A N I I N+A+LT L E +++ ++D N ++ L N L+ +YL+ N ++
Sbjct: 279 HLADNDIGDISNLANLTNLTELQLDNTNITDLNPLSNLTN---LEYLYLENNRIS 330
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 111/211 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L L N I I N+ L+ L L L DN L + ++ LINL+ L N I ++
Sbjct: 143 LESLGLDKNNISDISNLAGLSKLSNLSLNDNNLDNLSDVSGLINLKELKAGGNSISDLTP 202
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L N+ LYL N IS + + L K+ L L N I I + T++ LYLG+N
Sbjct: 203 LSNLINMVSLYLADNNISDLSPLAKLTKIDYLNLYTNNISNISVVANFTDIWGLYLGENN 262
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ I L +LT L L L N + I NL LTNLT+L L +T + L + LE L
Sbjct: 263 ITDIAVLTNLTGLGELHLADNDIGDISNLANLTNLTELQLDNTNITDLNPLSNLTNLEYL 322
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ N+IS I+++ L+ L +++NQ+ D
Sbjct: 323 YLENNRISDIKSLQPLSNLLFLDLDNNQIRD 353
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 25/210 (11%)
Query: 108 LDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG 167
LD I+ I+G+ +L NL++LY N IS I + + L +++G+N I + L
Sbjct: 80 LDSPSRNIQSIEGIQYLNNLDRLYFGENNISDISQLSGVTSLTYVDVGENNISNLSPLAN 139
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQ---------- 217
LTNLE L L KN IS I NLA L+KL+ LSL N L + ++ L NL +
Sbjct: 140 LTNLESLGLDKNNISDISNLAGLSKLSNLSLNDNNLDNLSDVSGLINLKELKAGGNSISD 199
Query: 218 ------------LYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWIN 265
LYL++N ++ + L K++ L++ N IS I +A+ T++ ++
Sbjct: 200 LTPLSNLINMVSLYLADNNISDLSPLAKLTKIDYLNLYTNNISNISVVANFTDIWGLYLG 259
Query: 266 DNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+N ++D + VL N L ++L N +
Sbjct: 260 ENNITD---IAVLTNLTGLGELHLADNDIG 286
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
S + ++ L N I + + L + L L DN ++ + L L ++ L+L N I
Sbjct: 182 SGLINLKELKAGGNSISDLTPLSNLINMVSLYLADNNISDLSPLAKLTKIDYLNLYTNNI 241
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
I + + ++ LYL N I+ I + +L L L L DN I I NL LTNL EL
Sbjct: 242 SNISVVANFTDIWGLYLGENNITDIAVLTNLTGLGELHLADNDIGDISNLANLTNLTELQ 301
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
L I+ ++ L++LT L L L+ NR+ I++L+ L+NL L L N + I +L +
Sbjct: 302 LDNTNITDLNPLSNLTNLEYLYLENNRISDIKSLQPLSNLLFLDLDNNQIRDIS-ILPDS 360
Query: 236 KLETLDV 242
LD
Sbjct: 361 PPHVLDF 367
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 64/126 (50%)
Query: 146 LKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRT 205
L ++ L+ I+ IE + L NL+ LY G+N IS I L+ +T L + + N +
Sbjct: 74 LNQIYTLDSPSRNIQSIEGIQYLNNLDRLYFGENNISDISQLSGVTSLTYVDVGENNISN 133
Query: 206 IENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWIN 265
+ L LTNL L L +N ++ I NL KL L + N + + +++ L L+E
Sbjct: 134 LSPLANLTNLESLGLDKNNISDISNLAGLSKLSNLSLNDNNLDNLSDVSGLINLKELKAG 193
Query: 266 DNQVSD 271
N +SD
Sbjct: 194 GNSISD 199
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 182 SRIDNLASLTKLN---ILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
+ +D++ S T+LN L +++IE ++ L NL +LY EN ++ I L L
Sbjct: 63 ASVDDVVSQTELNQIYTLDSPSRNIQSIEGIQYLNNLDRLYFGENNISDISQLSGVTSLT 122
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+DV N IS + +A+LT L+ ++ N +SD
Sbjct: 123 YVDVGENNISNLSPLANLTNLESLGLDKNNISD 155
>gi|281353717|gb|EFB29301.1| hypothetical protein PANDA_011332 [Ailuropoda melanoleuca]
Length = 651
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 73 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 129
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 130 KNRIKKISNLENLKSLDVLDLHGNQITKIENVGHLCDLRVLNLARNLLSHVDNLSGLDSL 189
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S + +V L ++ L I D NP+AQ+
Sbjct: 190 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSSSLSDITFDGNPIAQE 249
Query: 298 PNYRRKI 304
Y+ I
Sbjct: 250 SWYKHTI 256
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 80 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 139
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV HL L+VL L N + ++NL GL +L EL L N+I
Sbjct: 140 ENLKSLDVLDLHGNQITKIENVGHLCDLRVLNLARNLLSHVDNLSGLDSLTELNLRHNQI 199
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + T E++ L + + L + +T N ++ E
Sbjct: 200 TFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSSSL----SDITFDGNPIAQE------ 249
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +I+QN+ L +L
Sbjct: 250 -SWYKHTILQNMTQLRQL 266
>gi|440890663|gb|ELR44888.1| Leucine-rich repeat-containing protein 49 [Bos grunniens mutus]
Length = 684
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNSITQIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNFLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S + +V L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSTSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ I
Sbjct: 285 SWYKHTI 291
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNSITQIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + T E++ L + T L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSTSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +I+QN+ L +L
Sbjct: 285 -SWYKHTILQNMMQLRQL 301
>gi|154152009|ref|NP_001093813.1| leucine-rich repeat-containing protein 49 [Bos taurus]
gi|151554765|gb|AAI50051.1| LRRC49 protein [Bos taurus]
gi|296483625|tpg|DAA25740.1| TPA: leucine rich repeat containing 49 [Bos taurus]
Length = 685
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNSITQIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNFLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S + +V L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSTSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ I
Sbjct: 285 SWYKHTI 291
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNSITQIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + T E++ L + T L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSTSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +I+QN+ L +L
Sbjct: 285 -SWYKHTILQNMMQLRQL 301
>gi|154425767|gb|AAI51450.1| LRRC49 protein [Bos taurus]
Length = 685
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNSITQIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNFLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S + +V L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSTSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ I
Sbjct: 285 SWYKHTI 291
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNSITQIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + T E++ L + T L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSTSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +I+QN+ L +L
Sbjct: 285 -SWYKHTILQNMMQLRQL 301
>gi|301773906|ref|XP_002922369.1| PREDICTED: leucine-rich repeat-containing protein 49-like
[Ailuropoda melanoleuca]
Length = 686
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENVGHLCDLRVLNLARNLLSHVDNLSGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S + +V L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSSSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ I
Sbjct: 285 SWYKHTI 291
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 115/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV HL L+VL L N + ++NL GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENVGHLCDLRVLNLARNLLSHVDNLSGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + T E++ L + + L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSSSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +I+QN+ L +L
Sbjct: 285 -SWYKHTILQNMTQLRQL 301
>gi|402874740|ref|XP_003901186.1| PREDICTED: leucine-rich repeat-containing protein 49 [Papio anubis]
Length = 732
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 105/170 (61%)
Query: 135 NKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLN 194
N I++I+N+ +L+KL L+L DN+I I L L L L LGKN+I +I NL +L L+
Sbjct: 168 NFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNLENLKSLD 227
Query: 195 ILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIA 254
+L L N++ IEN+ L L L L+ N L+ ++NL + L L++ +N+I+ ++++
Sbjct: 228 VLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQITFVRDVD 287
Query: 255 HLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKI 304
+L LQ +++ N +S +++V+ L ++ L I D NP+AQ+ Y+ +
Sbjct: 288 NLPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQESWYKHTV 337
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRI++I L
Sbjct: 161 RLLNFQHNFITRIQNISNLQKLISLDLYDNQIEEISGLSTLRCLRVLLLGKNRIKKISNL 220
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIEN++HL +L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 221 ENLKSLDVLDLHGNQITKIENINHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 280
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +++ L + + L + +T N ++ E
Sbjct: 281 TFVRDVDNLPCLQHLFLSFNNISSFDSVSCLADSSSL----SDITFDGNPIAQE------ 330
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 331 -SWYKHTVLQNMMQLRQL 347
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 22/138 (15%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
C+ LLL N IKKI N+ L +L L+L+ NQ+T IEN
Sbjct: 203 CLRVLLLGKNRIKKISNLENLKSLDVLDLHGNQITKIEN--------------------- 241
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
++HL L L L N +S ++N++ L L L L N+I + ++D L L+ L+L N
Sbjct: 242 -INHLCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQITFVRDVDNLPCLQHLFLSFN 300
Query: 180 KISRIDNLASLTKLNILS 197
IS D+++ L + LS
Sbjct: 301 NISSFDSVSCLADSSSLS 318
>gi|403371774|gb|EJY85771.1| Leucine Rich Repeat family protein [Oxytricha trifallax]
gi|403377044|gb|EJY88516.1| Leucine Rich Repeat family protein [Oxytricha trifallax]
Length = 746
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 104/175 (59%)
Query: 57 KEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIR 116
+E +E++ L +K I + +K L L +N++ IENL +L NL LDLS N+++
Sbjct: 194 REQNVEKMNLDQRNLKHIPLLEGEEKIKYLNLQNNEIVKIENLVSLPNLTFLDLSMNKLK 253
Query: 117 EIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYL 176
EI + +L L L N+I I+N+D K L VL+L +NKI IENL L NL L L
Sbjct: 254 EISNFSTVEHLRVLILSKNQIESIKNLDSFKNLDVLDLHENKISKIENLSKLVNLRVLNL 313
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
N I IDNL L L L+++ N++ I++L +L +L +LYLS N +TTIE +
Sbjct: 314 SNNLIETIDNLNGLKALVELNMRKNKINQIKDLNSLNSLQKLYLSNNNITTIEGI 368
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 117/209 (55%), Gaps = 3/209 (1%)
Query: 104 NLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE 163
N+E ++L ++ I L+ ++ L L +N+I KIEN+ L L L+L NK++ I
Sbjct: 197 NVEKMNLDQRNLKHIPLLEGEEKIKYLNLQNNEIVKIENLVSLPNLTFLDLSMNKLKEIS 256
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
N + +L L L KN+I I NL S L++L L N++ IENL L NL L LS N
Sbjct: 257 NFSTVEHLRVLILSKNQIESIKNLDSFKNLDVLDLHENKISKIENLSKLVNLRVLNLSNN 316
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
+ TI+NL + L L++ NKI+ I+++ L LQ+ ++++N ++ T+ ++
Sbjct: 317 LIETIDNLNGLKALVELNMRKNKINQIKDLNSLNSLQKLYLSNNNIT---TIEGIKELPS 373
Query: 284 LQTIYLDRNPVAQDPNYRRKIKLVCPWIV 312
L + L+ NP+ + +++ I+ P ++
Sbjct: 374 LTDLTLENNPIEKQMKFQQNIREKFPQLL 402
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK V + L L NLI+ I+N++ L L EL + N++ I++L++L +L+ L LS N I
Sbjct: 303 SKLVNLRVLNLSNNLIETIDNLNGLKALVELNMRKNKINQIKDLNSLNSLQKLYLSNNNI 362
Query: 116 REIKGLDHLANLEKLYLCSNKISK 139
I+G+ L +L L L +N I K
Sbjct: 363 TTIEGIKELPSLTDLTLENNPIEK 386
>gi|428170783|gb|EKX39705.1| hypothetical protein GUITHDRAFT_54483, partial [Guillardia theta
CCMP2712]
Length = 181
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 101/166 (60%)
Query: 139 KIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSL 198
++EN+D+L L L+L +N +R+IE L +T L L LGKN + RI L LT+L++L L
Sbjct: 1 QVENLDNLPNLIFLDLYNNHVRVIECLTAVTTLRVLMLGKNHLERIQGLDKLTRLDVLDL 60
Query: 199 QCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N + TIENL+ L L L L+ N + + NL S L L++ N I+ ++++ ++
Sbjct: 61 HSNNISTIENLDNLPELRVLNLAGNQIKVVNNLSSLASLTELNLRRNLITEVRSLEAIST 120
Query: 259 LQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKI 304
LQ +I++NQ++ ++ + + NK L + LD NPVA + YR+ +
Sbjct: 121 LQRAFISNNQLASFDALESIFMNKNLLELALDGNPVASECGYRQVV 166
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 95/158 (60%), Gaps = 3/158 (1%)
Query: 73 KIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYL 132
++EN+ L L L+LY+N + VIE L + L +L L N + I+GLD L L+ L L
Sbjct: 1 QVENLDNLPNLIFLDLYNNHVRVIECLTAVTTLRVLMLGKNHLERIQGLDKLTRLDVLDL 60
Query: 133 CSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTK 192
SN IS IEN+D+L +L+VL L N+I+++ NL L +L EL L +N I+ + +L +++
Sbjct: 61 HSNNISTIENLDNLPELRVLNLAGNQIKVVNNLSSLASLTELNLRRNLITEVRSLEAIST 120
Query: 193 LNILSLQCNRLRTIENLEAL---TNLTQLYLSENGLTT 227
L + N+L + + LE++ NL +L L N + +
Sbjct: 121 LQRAFISNNQLASFDALESIFMNKNLLELALDGNPVAS 158
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 80/136 (58%)
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELG 155
+ENLD L NL LDL N +R I+ L + L L L N + +I+ +D L +L VL+L
Sbjct: 2 VENLDNLPNLIFLDLYNNHVRVIECLTAVTTLRVLMLGKNHLERIQGLDKLTRLDVLDLH 61
Query: 156 DNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNL 215
N I IENLD L L L L N+I ++NL+SL L L+L+ N + + +LEA++ L
Sbjct: 62 SNNISTIENLDNLPELRVLNLAGNQIKVVNNLSSLASLTELNLRRNLITEVRSLEAISTL 121
Query: 216 TQLYLSENGLTTIENL 231
+ ++S N L + + L
Sbjct: 122 QRAFISNNQLASFDAL 137
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 82/143 (57%), Gaps = 11/143 (7%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L+L N +++I+ + LT L L+L+ N ++ IENLD L L +L+L+ N+I+ + L
Sbjct: 36 LMLGKNHLERIQGLDKLTRLDVLDLHSNNISTIENLDNLPELRVLNLAGNQIKVVNNLSS 95
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGL---TNLEELYLGKNK 180
LA+L +L L N I+++ +++ + L+ + +N++ + L+ + NL EL L N
Sbjct: 96 LASLTELNLRRNLITEVRSLEAISTLQRAFISNNQLASFDALESIFMNKNLLELALDGNP 155
Query: 181 ISR--------IDNLASLTKLNI 195
++ +DNL +L L++
Sbjct: 156 VASECGYRQVVLDNLKNLRHLDL 178
>gi|149691802|ref|XP_001495278.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 1
[Equus caballus]
Length = 687
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQISKIENVSHLCDLRVLNLARNLLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S + +V L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSTSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ I
Sbjct: 285 SWYKHTI 291
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+ISKIENV HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQISKIENVSHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + T E++ L + T L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSTSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +I+QN+ L +L
Sbjct: 285 -SWYKHTILQNMMQLRQL 301
>gi|194332627|ref|NP_001123802.1| leucine rich repeat containing 49 [Xenopus (Silurana) tropicalis]
gi|189441792|gb|AAI67597.1| LOC100170553 protein [Xenopus (Silurana) tropicalis]
Length = 763
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 104/178 (58%)
Query: 127 LEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDN 186
L LYL N I++I+N+ L+ L L+L DN I I L L +L L LGKN+I +I N
Sbjct: 190 LRLLYLHHNSITRIQNLSSLQHLIFLDLYDNNIEEISGLSSLRSLRVLMLGKNRIQKISN 249
Query: 187 LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK 246
L +L L++L L N++ IEN+ L L L L+ N + +EN+ + L+ L++ NK
Sbjct: 250 LENLKNLDVLDLHGNQIAKIENVSHLRELRVLNLARNQINQVENINGLDSLKELNLRDNK 309
Query: 247 ISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKI 304
I+ ++++ L LQ +++ N +S N + L ++ L + LD NP+AQ+ YR+ I
Sbjct: 310 ITFLRDVDTLPSLQLLYLSFNNISRINDILCLADSTSLSDVTLDGNPIAQESWYRQTI 367
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 98/155 (63%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I +I+N+ L L L+LYDN + I L +L +L +L L NRI++I L++
Sbjct: 193 LYLHHNSITRIQNLSSLQHLIFLDLYDNNIEEISGLSSLRSLRVLMLGKNRIQKISNLEN 252
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL+ L L N+I+KIENV HL++L+VL L N+I +EN++GL +L+EL L NKI+
Sbjct: 253 LKNLDVLDLHGNQIAKIENVSHLRELRVLNLARNQINQVENINGLDSLKELNLRDNKITF 312
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
+ ++ +L L +L L N + I ++ L + T L
Sbjct: 313 LRDVDTLPSLQLLYLSFNNISRINDILCLADSTSL 347
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 94/150 (62%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L L+ N +T I+NL +L +L LDL N I EI GL L +L L L N+I KI N
Sbjct: 190 LRLLYLHHNSITRIQNLSSLQHLIFLDLYDNNIEEISGLSSLRSLRVLMLGKNRIQKISN 249
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN+ L L L L +N+I++++N+ L L L+L+ N+
Sbjct: 250 LENLKNLDVLDLHGNQIAKIENVSHLRELRVLNLARNQINQVENINGLDSLKELNLRDNK 309
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLL 232
+ + +++ L +L LYLS N ++ I ++L
Sbjct: 310 ITFLRDVDTLPSLQLLYLSFNNISRINDIL 339
>gi|347547841|ref|YP_004854169.1| putative internalin A [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346980912|emb|CBW84831.1| Putative internalin A [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 798
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 126/241 (52%), Gaps = 4/241 (1%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N + I+ + LT L+ L L N++T I + LINL+ L L N+ ++ L L NL
Sbjct: 195 NKVTDIKPLANLTKLERLNLSRNKITDISPVAKLINLQSLSLDNNQFSDLTPLGILTNLT 254
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L L SN +S I + L LK L L DN+I + + LTNL +L L N+IS + ++
Sbjct: 255 ELSLYSNHLSDIGTLASLTNLKKLNLMDNQISNLAPISNLTNLTDLNLSTNQISDLKPIS 314
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
+LT L +L + N+L I + +L NL L L N ++ + L + KL+ L NK+S
Sbjct: 315 NLTNLTVLQVPTNQLEDISPISSLPNLEFLTLYTNQISDLSPLENLTKLKQLFFYDNKVS 374
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVC 308
+ IA+LT LQE NQ+SD + L QL LD+ V P + + LV
Sbjct: 375 DVSPIANLTSLQELSAGTNQISDLTPLAKLTRLTQLG---LDKQKVTSQP-VKYQSNLVV 430
Query: 309 P 309
P
Sbjct: 431 P 431
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 135/258 (52%), Gaps = 10/258 (3%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ +L +N I + + LT L L + +NQ+ + L L +L L L +N+I ++
Sbjct: 100 VTQLDFSYNQITDLTPLANLTKLTSLVMNNNQIADLTPLQNLTSLTELTLFYNKITDVAP 159
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L NL L + N+IS + + +L L+ L +G NK+ I+ L LT LE L L +NK
Sbjct: 160 LANLTNLTNLAITDNEISDVTPIGNLTNLEGLSIG-NKVTDIKPLANLTKLERLNLSRNK 218
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ I +A L L LSL N+ + L LTNLT+L L N L+ I L S L+ L
Sbjct: 219 ITDISPVAKLINLQSLSLDNNQFSDLTPLGILTNLTELSLYSNHLSDIGTLASLTNLKKL 278
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIY---LDRNPVAQD 297
++ N+IS + I++LT L + ++ NQ+SD ++ L N LQ D +P++
Sbjct: 279 NLMDNQISNLAPISNLTNLTDLNLSTNQISDLKPISNLTNLTVLQVPTNQLEDISPISSL 338
Query: 298 PN------YRRKIKLVCP 309
PN Y +I + P
Sbjct: 339 PNLEFLTLYTNQISDLSP 356
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 94/167 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L L N + I + LT LK+L L DNQ++ + + L NL L+LS N+I ++K
Sbjct: 253 LTELSLYSNHLSDIGTLASLTNLKKLNLMDNQISNLAPISNLTNLTDLNLSTNQISDLKP 312
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ +L NL L + +N++ I + L L+ L L N+I + L+ LT L++L+ NK
Sbjct: 313 ISNLTNLTVLQVPTNQLEDISPISSLPNLEFLTLYTNQISDLSPLENLTKLKQLFFYDNK 372
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
+S + +A+LT L LS N++ + L LT LTQL L + +T+
Sbjct: 373 VSDVSPIANLTSLQELSAGTNQISDLTPLAKLTRLTQLGLDKQKVTS 419
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 10/179 (5%)
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
LA + K L +S L + LE I I ++ L N+ +L N+I+
Sbjct: 53 LAEVVKTDLGKATVSDTVTQTDLDGITSLEADRKGITSIAGVEYLNNVTQLDFSYNQITD 112
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ LA+LTKL L + N++ + L+ LT+LT+L L N +T + L + L L +
Sbjct: 113 LTPLANLTKLTSLVMNNNQIADLTPLQNLTSLTELTLFYNKITDVAPLANLTNLTNLAIT 172
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN------PVAQ 296
N+IS + I +LT L+ I N+V+D + L N +L+ + L RN PVA+
Sbjct: 173 DNEISDVTPIGNLTNLEGLSIG-NKVTD---IKPLANLTKLERLNLSRNKITDISPVAK 227
>gi|186685053|ref|YP_001868249.1| hypothetical protein Npun_F4961 [Nostoc punctiforme PCC 73102]
gi|186467505|gb|ACC83306.1| leucine-rich repeat protein [Nostoc punctiforme PCC 73102]
Length = 263
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 107/188 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L L N I I+ + LT L ++L N+++ I+ L L L +DL N I +IK
Sbjct: 59 LTSLSLNSNKISDIKPLSALTKLTSIDLGINEISDIKPLSVLTKLTSIDLDINEISDIKP 118
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL L L N+IS I+ + L L L L N++ I+ L LTNL LYL N+
Sbjct: 119 LSALTNLTALSLRENQISDIKPLSALTNLTSLSLRSNQVSNIKPLSTLTNLTYLYLNSNE 178
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS I L++LT L ILSL+ N + ++ L ALTNLT+L L+ N ++ I+ L S + L +
Sbjct: 179 ISDIKPLSNLTNLTILSLESNEISNVKPLSALTNLTELSLNSNKISNIKPLSSLKNLTFI 238
Query: 241 DVAYNKIS 248
++ N I+
Sbjct: 239 NIKNNAIA 246
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 119/218 (54%), Gaps = 16/218 (7%)
Query: 102 LINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRI 161
L NL L L+ N+I +IK L L L + L N+IS I+ + L KL ++L N+I
Sbjct: 56 LTNLTSLSLNSNKISDIKPLSALTKLTSIDLGINEISDIKPLSVLTKLTSIDLDINEISD 115
Query: 162 IENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLS 221
I+ L LTNL L L +N+IS I L++LT L LSL+ N++ I+ L LTNLT LYL+
Sbjct: 116 IKPLSALTNLTALSLRENQISDIKPLSALTNLTSLSLRSNQVSNIKPLSTLTNLTYLYLN 175
Query: 222 ENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENN 281
N ++ I+ L + L L + N+IS ++ ++ LT L E +N N++S+ ++ L+N
Sbjct: 176 SNEISDIKPLSNLTNLTILSLESNEISNVKPLSALTNLTELSLNSNKISNIKPLSSLKN- 234
Query: 282 KQLQTIYLDRNPVAQDPNYRRKIKLVCP----WIVQID 315
L I + N +A +CP I Q D
Sbjct: 235 --LTFINIKNNAIAPK---------ICPVKPESICQFD 261
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 101/192 (52%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
LT L L L N+++ I+ L L L +DL N I +IK L L L + L N+IS
Sbjct: 56 LTNLTSLSLNSNKISDIKPLSALTKLTSIDLGINEISDIKPLSVLTKLTSIDLDINEISD 115
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I+ + L L L L +N+I I+ L LTNL L L N++S I L++LT L L L
Sbjct: 116 IKPLSALTNLTALSLRENQISDIKPLSALTNLTSLSLRSNQVSNIKPLSTLTNLTYLYLN 175
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N + I+ L LTNLT L L N ++ ++ L + L L + NKIS I+ ++ L L
Sbjct: 176 SNEISDIKPLSNLTNLTILSLESNEISNVKPLSALTNLTELSLNSNKISNIKPLSSLKNL 235
Query: 260 QEFWINDNQVSD 271
I +N ++
Sbjct: 236 TFINIKNNAIAP 247
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%)
Query: 210 EALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQV 269
+ LTNLT L L+ N ++ I+ L + KL ++D+ N+IS I+ ++ LT+L ++ N++
Sbjct: 54 QKLTNLTSLSLNSNKISDIKPLSALTKLTSIDLGINEISDIKPLSVLTKLTSIDLDINEI 113
Query: 270 SDWNTVNVLEN 280
SD ++ L N
Sbjct: 114 SDIKPLSALTN 124
>gi|345795141|ref|XP_003433981.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 2
[Canis lupus familiaris]
Length = 642
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 64 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 120
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 121 KNRIKKISNLENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSL 180
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S + +V L ++ L I D NP+AQ+
Sbjct: 181 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSSSLSDITFDGNPIAQE 240
Query: 298 PNYRRKI 304
Y+ I
Sbjct: 241 SWYKHTI 247
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 71 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 130
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 131 ENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 190
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + T E++ L + + L + +T N ++ E
Sbjct: 191 TFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSSSL----SDITFDGNPIAQE------ 240
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +I+QN+ L +L
Sbjct: 241 -SWYKHTILQNMMQLRQL 257
>gi|328706969|ref|XP_001945533.2| PREDICTED: peroxidasin homolog [Acyrthosiphon pisum]
Length = 431
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 138/235 (58%), Gaps = 11/235 (4%)
Query: 74 IENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLC 133
IE++ LT L+ L+L N++ IE+L L L+ LDLS+N IR+I+ L HL LE L L
Sbjct: 3 IESLASLTELQFLDLSYNEIRDIESLAHLTKLQFLDLSYNEIRDIESLAHLTELETLMLS 62
Query: 134 SNKISKIEN--VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDN--LAS 189
+ IS+++N ++L KL+ L L +NKI IE+L LT LE L L N IS + N A+
Sbjct: 63 NTNISEVKNGAFENLSKLQSLYLDNNKIMEIESLAHLTELETLVLSNNNISEVKNCTFAN 122
Query: 190 LTKLNILSLQCNRLRTI--ENLEALTNLTQLYLSENGLTTIEN-LLSN-EKLETLDVAYN 245
L+KL L LQ N++R I E+ LT L L LS N ++ ++N L+N KL+TL + N
Sbjct: 123 LSKLLSLDLQNNKIRDIEPESFTYLTELETLMLSNNNISAVKNGALANLSKLQTLFLHRN 182
Query: 246 KISIIQN--IAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDP 298
KI I+ +LT L+E ++ N++ + + + + +L + LD N + P
Sbjct: 183 KIENIETGVFNNLTSLKELNLDYNKIHKID-LEMFKGLTKLDKLSLDYNMIRHIP 236
>gi|198435195|ref|XP_002130354.1| PREDICTED: similar to leucine rich repeat containing 49 [Ciona
intestinalis]
Length = 826
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 106/181 (58%)
Query: 135 NKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLN 194
N I++I+++ +L++L L+L DN+I + L L +L L LGKN+I +I +L +L KL+
Sbjct: 243 NLITRIQHLSNLRRLIFLDLYDNQIEEMTGLSSLKSLRVLMLGKNRIRQISSLDNLVKLD 302
Query: 195 ILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIA 254
+L L N+++T+ENL L+ L L L+ N + + NL + L L++ N I+ + +
Sbjct: 303 VLDLHGNQIQTVENLSHLSELRVLNLAGNQIEHVSNLSGMDTLAELNLRRNIIASVSEVD 362
Query: 255 HLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQI 314
LT LQ +++ N +S W + L + L I LD NP++ D Y++ + P + Q+
Sbjct: 363 LLTSLQRLFLSFNNISRWGDIECLSDASALCEISLDGNPISSDVCYKQIVLRSMPQLRQL 422
Query: 315 D 315
D
Sbjct: 423 D 423
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 18/201 (8%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + NLI +I+++ L L L+LYDNQ+ + L +L +L +L L NRIR+I L
Sbjct: 236 RLLNFQHNLITRIQHLSNLRRLIFLDLYDNQIEEMTGLSSLKSLRVLMLGKNRIRQISSL 295
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
D+L L+ L L N+I +EN+ HL +L+VL L N+I + NL G+ L EL L +N I
Sbjct: 296 DNLVKLDVLDLHGNQIQTVENLSHLSELRVLNLAGNQIEHVSNLSGMDTLAELNLRRNII 355
Query: 182 SRIDNLASLTKLNILSLQCN---RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
+ + + LT L L L N R IE L + L ++ L N +++
Sbjct: 356 ASVSEVDLLTSLQRLFLSFNNISRWGDIECLSDASALCEISLDGNPISS----------- 404
Query: 239 TLDVAYNKISIIQNIAHLTEL 259
DV Y +I +++++ L +L
Sbjct: 405 --DVCYKQI-VLRSMPQLRQL 422
>gi|345795137|ref|XP_003433980.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 1
[Canis lupus familiaris]
Length = 686
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S + +V L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSSSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ I
Sbjct: 285 SWYKHTI 291
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + T E++ L + + L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSSSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +I+QN+ L +L
Sbjct: 285 -SWYKHTILQNMMQLRQL 301
>gi|194034378|ref|XP_001928516.1| PREDICTED: leucine-rich repeat-containing protein 49 [Sus scrofa]
Length = 685
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S + +V L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSTSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ I
Sbjct: 285 SWYKHTI 291
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + T E++ L + T L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSTSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +I+QN+ L +L
Sbjct: 285 -SWYKHTILQNMMQLRQL 301
>gi|440491950|gb|ELQ74552.1| Protein phosphatase 1, regulatory subunit [Trachipleistophora
hominis]
Length = 224
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 108/178 (60%), Gaps = 6/178 (3%)
Query: 73 KIENIHM--LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
KI +I M L + L+L DN +T I++L+ L NL LDL +N + +I+ L L L L
Sbjct: 34 KITSIRMTYLPNVHSLDLSDNLITTIQDLENLPNLRTLDLGYNLLTQIQNLSFLP-LTDL 92
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L N I +IEN+ + LK L+L N I IENL + NLEELYLG N+I ++N+ L
Sbjct: 93 FLMCNDIERIENLG-IPSLKNLDLACNNITKIENLTCI-NLEELYLGNNRIRTVENVEHL 150
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSEN-GLTTIENLLSNEKLETLDVAYNKI 247
+KL+ LSLQCN ++ I+ L+ NL L L N L +ENL KLE LDV+ K+
Sbjct: 151 SKLHTLSLQCNCIQRIDCLKLPKNLKYLLLDGNEKLQELENLECLRKLEYLDVSKTKV 208
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 88/159 (55%), Gaps = 4/159 (2%)
Query: 110 LSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLT 169
L N+I I+ + +L N+ L L N I+ I+++++L L+ L+LG N + I+NL L
Sbjct: 30 LYHNKITSIR-MTYLPNVHSLDLSDNLITTIQDLENLPNLRTLDLGYNLLTQIQNLSFLP 88
Query: 170 NLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
L +L+L N I RI+NL + L L L CN + IENL + NL +LYL N + T+E
Sbjct: 89 -LTDLFLMCNDIERIENLG-IPSLKNLDLACNNITKIENLTCI-NLEELYLGNNRIRTVE 145
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQ 268
N+ KL TL + N I I + L+ ++ N+
Sbjct: 146 NVEHLSKLHTLSLQCNCIQRIDCLKLPKNLKYLLLDGNE 184
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 25/120 (20%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I++IEN+ + +LK L+L N +T IENL T INLE L L NRIR ++ ++H
Sbjct: 92 LFLMCNDIERIENLGI-PSLKNLDLACNNITKIENL-TCINLEELYLGNNRIRTVENVEH 149
Query: 124 LANLEKLYLCSNKISKI-----------------------ENVDHLKKLKVLELGDNKIR 160
L+ L L L N I +I EN++ L+KL+ L++ K++
Sbjct: 150 LSKLHTLSLQCNCIQRIDCLKLPKNLKYLLLDGNEKLQELENLECLRKLEYLDVSKTKVK 209
>gi|345795139|ref|XP_544751.3| PREDICTED: leucine-rich repeat-containing protein 49 isoform 3
[Canis lupus familiaris]
Length = 691
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 113 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 169
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 170 KNRIKKISNLENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSL 229
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S + +V L ++ L I D NP+AQ+
Sbjct: 230 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSSSLSDITFDGNPIAQE 289
Query: 298 PNYRRKI 304
Y+ I
Sbjct: 290 SWYKHTI 296
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 120 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 179
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 180 ENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 239
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + T E++ L + + L + +T N ++ E
Sbjct: 240 TFVRDVDNLPCLQRLFLSFNNISTFESVCCLADSSSL----SDITFDGNPIAQE------ 289
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +I+QN+ L +L
Sbjct: 290 -SWYKHTILQNMMQLRQL 306
>gi|428303964|ref|YP_007140789.1| hypothetical protein Cri9333_0293 [Crinalium epipsammum PCC 9333]
gi|428245499|gb|AFZ11279.1| leucine-rich repeat-containing protein [Crinalium epipsammum PCC
9333]
Length = 409
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 125/232 (53%), Gaps = 5/232 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I + + LT L+ L L +Q++ ++ L L NL +L L+ N+I ++ L
Sbjct: 168 LRLDGNKISDVTPLAGLTNLRNLRLDHSQISDVKPLTGLTNLSVLYLNKNQISDVTPLAG 227
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L NL L L N+IS + + L L+ L L N+I ++ L G NL LYL N S
Sbjct: 228 LINLRDLRLDQNQISDVTPLAGLINLRGLGLDQNQISDVKPLFGFVNLTTLYLNDN--SD 285
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ L SL L +L+L N++ ++ L ALTNLT L L +N ++ ++ L S +L L +
Sbjct: 286 VTPLFSLANLTVLTLYDNKISDVKPLTALTNLTVLELDQNQISDVKPLASLARLTRLSLN 345
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
N+IS ++ +A L +L ++ NQ+SD + L N L + L NP++
Sbjct: 346 DNQISDVEPLAGLAKLTSLRLSQNQISDVKPLTGLTN---LSGLGLSDNPIS 394
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 138/280 (49%), Gaps = 31/280 (11%)
Query: 36 DNPDEESEAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTV 95
D P+ + E + ++K E ++V I K + +L +K L+ + ++T
Sbjct: 104 DTPNAKDEVKFKDAKLEAAIRRQVEIPD--------SKRLTLEVLQGIKVLDANNAEITS 155
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELG 155
+E + L NL IL L N+I ++ L L NL L L ++IS ++ + L L VL L
Sbjct: 156 LEGIQALRNLTILRLDGNKISDVTPLAGLTNLRNLRLDHSQISDVKPLTGLTNLSVLYLN 215
Query: 156 DNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNL 215
N+I + L GL NL +L L +N+IS + LA L L L L N++ ++ L NL
Sbjct: 216 KNQISDVTPLAGLINLRDLRLDQNQISDVTPLAGLINLRGLGLDQNQISDVKPLFGFVNL 275
Query: 216 TQLYLSENG-------------LTTIENLLSNEK-------LETLDVAYNKISIIQNIAH 255
T LYL++N LT +N +S+ K L L++ N+IS ++ +A
Sbjct: 276 TTLYLNDNSDVTPLFSLANLTVLTLYDNKISDVKPLTALTNLTVLELDQNQISDVKPLAS 335
Query: 256 LTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
L L +NDNQ+SD V L +L ++ L +N ++
Sbjct: 336 LARLTRLSLNDNQISD---VEPLAGLAKLTSLRLSQNQIS 372
>gi|290892493|ref|ZP_06555487.1| internalin [Listeria monocytogenes FSL J2-071]
gi|404406817|ref|YP_006689532.1| hypothetical protein LMOSLCC2376_0334 [Listeria monocytogenes
SLCC2376]
gi|290558059|gb|EFD91579.1| internalin [Listeria monocytogenes FSL J2-071]
gi|404240966|emb|CBY62366.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes SLCC2376]
Length = 589
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 111/192 (57%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L T+ L L ++ +E ++ L NL L LS N++ +I L L NL L L N IS
Sbjct: 70 LDTINSLTLTSKGISSLEGMNYLTNLGTLILSGNQVSDISPLKGLTNLTMLQLSGNPISD 129
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I + +LK L+ L++ D +I I L GLTNL+ L L N++ + + +L +L L++
Sbjct: 130 ISALSNLKNLQALDINDAQITDITPLSGLTNLKGLGLYDNQLENLSGVNNLHQLRSLNVS 189
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N+L ++ L+AL+NL LY +EN + ++ + + L LD++ N+I +A LT +
Sbjct: 190 KNKLTNLDELQALSNLGVLYANENQIDNLQGISALNNLFLLDLSANQIGDTTPLAGLTNV 249
Query: 260 QEFWINDNQVSD 271
Q ++++NQ+SD
Sbjct: 250 QTLYVSNNQISD 261
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 111/199 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+L N + I + LT L L+L N ++ I L L NL+ LD++ +I +I
Sbjct: 95 LGTLILSGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQITDITP 154
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L N++ + V++L +L+ L + NK+ ++ L L+NL LY +N+
Sbjct: 155 LSGLTNLKGLGLYDNQLENLSGVNNLHQLRSLNVSKNKLTNLDELQALSNLGVLYANENQ 214
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I + +++L L +L L N++ L LTN+ LY+S N ++ + L S L+ L
Sbjct: 215 IDNLQGISALNNLFLLDLSANQIGDTTPLAGLTNVQTLYVSNNQISDVTGLSSLINLDWL 274
Query: 241 DVAYNKISIIQNIAHLTEL 259
D++ NKIS I+ + LT+L
Sbjct: 275 DISQNKISNIRPLNSLTKL 293
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 128/250 (51%), Gaps = 12/250 (4%)
Query: 38 PDEE--SEAETTESKAEDEE----SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDN 91
PD +E +TT K+ E + I L L I +E ++ LT L L L N
Sbjct: 44 PDNALATEIQTTLGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYLTNLGTLILSGN 103
Query: 92 QLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKV 151
Q++ I L L NL +L LS N I +I L +L NL+ L + +I+ I + L LK
Sbjct: 104 QVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQITDITPLSGLTNLKG 163
Query: 152 LELGDNKIRIIENLDGLTNLEELY---LGKNKISRIDNLASLTKLNILSLQCNRLRTIEN 208
L L DN++ ENL G+ NL +L + KNK++ +D L +L+ L +L N++ ++
Sbjct: 164 LGLYDNQL---ENLSGVNNLHQLRSLNVSKNKLTNLDELQALSNLGVLYANENQIDNLQG 220
Query: 209 LEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQ 268
+ AL NL L LS N + L ++TL V+ N+IS + ++ L L I+ N+
Sbjct: 221 ISALNNLFLLDLSANQIGDTTPLAGLTNVQTLYVSNNQISDVTGLSSLINLDWLDISQNK 280
Query: 269 VSDWNTVNVL 278
+S+ +N L
Sbjct: 281 ISNIRPLNSL 290
>gi|426232630|ref|XP_004010324.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 1
[Ovis aries]
Length = 685
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNSITQIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNFLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N ++ + +V L ++ L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNIATFESVCCLADSTSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNSITQIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + T E++ L + T L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQRLFLSFNNIATFESVCCLADSTSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMTQLRQL 301
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 114 LRLLNFQHNSITQIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISN 173
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 174 LENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNFLSHVDNLNGLDSLTELNLRHNQ 233
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L L +L+LS N + T E++ +A T L +
Sbjct: 234 ITFVRDVDNLPCLQRLFLSFNNIATFESVCC-------------------LADSTSLSDI 274
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 275 TFDGNPIAQESWYKHTVLQNMTQLRQLDMKR 305
>gi|449270590|gb|EMC81249.1| Leucine-rich repeat-containing protein 49, partial [Columba livia]
Length = 668
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 105/179 (58%)
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL L N I++I+N+ +L+ L L+L DN I I L L +L L LGKN+I +I
Sbjct: 98 NLRLLNFQHNFITRIQNISNLQHLVFLDLYDNLIEEISGLSTLRSLRVLLLGKNRIKKIS 157
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
NL +L L++L L N++ IEN+ L+ L L L+ N LT +ENL + L L++ +N
Sbjct: 158 NLENLKNLDVLDLHGNQITKIENISHLSELRVLNLARNLLTIVENLNGLDSLTELNLRHN 217
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKI 304
++S I+++ L LQ +++ N +S + + L ++ L I LD NP+AQ+ Y+ +
Sbjct: 218 QVSAIKDVDTLPCLQHLFLSFNNISSFEDILCLADSSSLSDITLDGNPIAQETWYKHTV 276
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDN + I L TL +L +L L NRI++I L
Sbjct: 100 RLLNFQHNFITRIQNISNLQHLVFLDLYDNLIEEISGLSTLRSLRVLLLGKNRIKKISNL 159
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIEN+ HL +L+VL L N + I+ENL+GL +L EL L N++
Sbjct: 160 ENLKNLDVLDLHGNQITKIENISHLSELRVLNLARNLLTIVENLNGLDSLTELNLRHNQV 219
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
S I ++ +L L L L N + + E++ L + + L
Sbjct: 220 SAIKDVDTLPCLQHLFLSFNNISSFEDILCLADSSSL 256
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 91/150 (60%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L +L LDL N I EI GL L +L L L N+I KI N
Sbjct: 99 LRLLNFQHNFITRIQNISNLQHLVFLDLYDNLIEEISGLSTLRSLRVLLLGKNRIKKISN 158
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN+ L+ L L L +N ++ ++NL L L L+L+ N+
Sbjct: 159 LENLKNLDVLDLHGNQITKIENISHLSELRVLNLARNLLTIVENLNGLDSLTELNLRHNQ 218
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLL 232
+ I++++ L L L+LS N +++ E++L
Sbjct: 219 VSAIKDVDTLPCLQHLFLSFNNISSFEDIL 248
>gi|354473502|ref|XP_003498974.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 3
[Cricetulus griseus]
Length = 686
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S ++ V+ L + L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNISSFDNVSCLAESTSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +N+ L T L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQRLFLSFNNISSFDNVSCLAESTSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMMQLRQL 301
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 114 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISN 173
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 174 LENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQ 233
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L L +L+LS N +++ +N + +A T L +
Sbjct: 234 ITFVRDVDNLPCLQRLFLSFNNISSFDN-------------------VSCLAESTSLSDI 274
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 275 TFDGNPIAQESWYKHTVLQNMMQLRQLDMKR 305
>gi|426232632|ref|XP_004010325.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 2
[Ovis aries]
Length = 691
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 114 IDGEEHL---RLLNFQHNSITQIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 170
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 171 KNRIKKISNLENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNFLSHVDNLNGLDSL 230
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N ++ + +V L ++ L I D NP+AQ+
Sbjct: 231 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNIATFESVCCLADSTSLSDITFDGNPIAQE 290
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 291 SWYKHTV 297
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 121 RLLNFQHNSITQIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 180
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 181 ENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNFLSHVDNLNGLDSLTELNLRHNQI 240
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + T E++ L + T L + +T N ++ E
Sbjct: 241 TFVRDVDNLPCLQRLFLSFNNIATFESVCCLADSTSL----SDITFDGNPIAQE------ 290
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 291 -SWYKHTVLQNMTQLRQL 307
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 120 LRLLNFQHNSITQIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISN 179
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 180 LENLKSLDVLDLHGNQITKIENVNHLCDLRVLNLARNFLSHVDNLNGLDSLTELNLRHNQ 239
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L L +L+LS N + T E++ +A T L +
Sbjct: 240 ITFVRDVDNLPCLQRLFLSFNNIATFESVCC-------------------LADSTSLSDI 280
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 281 TFDGNPIAQESWYKHTVLQNMTQLRQLDMKR 311
>gi|168181796|ref|ZP_02616460.1| putative internalin [Clostridium botulinum Bf]
gi|226950534|ref|YP_002805625.1| putative internalin [Clostridium botulinum A2 str. Kyoto]
gi|237796560|ref|YP_002864112.1| putative internalin [Clostridium botulinum Ba4 str. 657]
gi|182674967|gb|EDT86928.1| putative internalin [Clostridium botulinum Bf]
gi|226841706|gb|ACO84372.1| putative internalin [Clostridium botulinum A2 str. Kyoto]
gi|229263727|gb|ACQ54760.1| leucine-rich repeat protein [Clostridium botulinum Ba4 str. 657]
Length = 364
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 128/224 (57%), Gaps = 3/224 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I+ ++ I L L+EL+L DN++ I L +L ++ IL L N+I +I L + + L++L
Sbjct: 93 IQNLDGIENLLRLQELDLTDNEIDDISALSSLKDISILKLGKNKITDIASLKNCSKLKEL 152
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
YL NK+ I + + +K+ +L+L N + I L L NL+E+YL N + + + +
Sbjct: 153 YLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKNLKEIYLHNNGVIDFEPILKM 212
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+L ++L N ++++ L NL +LY+ +NG+ + L S L+ LDV+ NKI+ I
Sbjct: 213 QQLTTVNLAGNNFTDMKDINQLKNLIELYIGDNGIKDLTFLKSMPNLKVLDVSNNKITDI 272
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
+I++L ++E I+ N + D + +LEN K L + L N +
Sbjct: 273 NSISNLNGIEELNISSNYIRD---IKILENFKNLSKVDLRYNNI 313
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 104/186 (55%)
Query: 99 LDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
L +++++ LD S I+ + G+++L L++L L N+I I + LK + +L+LG NK
Sbjct: 77 LRDVVDIKKLDASNKGIQNLDGIENLLRLQELDLTDNEIDDISALSSLKDISILKLGKNK 136
Query: 159 IRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
I I +L + L+ELYL NK+ I L + K+ IL L N + I L L NL ++
Sbjct: 137 ITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKNLKEI 196
Query: 219 YLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
YL NG+ E +L ++L T+++A N + +++I L L E +I DN + D + +
Sbjct: 197 YLHNNGVIDFEPILKMQQLTTVNLAGNNFTDMKDINQLKNLIELYIGDNGIKDLTFLKSM 256
Query: 279 ENNKQL 284
N K L
Sbjct: 257 PNLKVL 262
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 133/260 (51%), Gaps = 8/260 (3%)
Query: 6 VPNTDEVDNDNLVTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIERLL 65
V + ++D N N++ +EN Q LD D E + + S +D I L
Sbjct: 80 VVDIKKLDASNKGIQNLDGIENLLRLQ-ELDLTDNEIDDISALSSLKD-------ISILK 131
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I I ++ + LKEL L+DN++ I L + ILDL+ N + +I L L
Sbjct: 132 LGKNKITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLK 191
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL+++YL +N + E + +++L + L N +++++ L NL ELY+G N I +
Sbjct: 192 NLKEIYLHNNGVIDFEPILKMQQLTTVNLAGNNFTDMKDINQLKNLIELYIGDNGIKDLT 251
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L S+ L +L + N++ I ++ L + +L +S N + I+ L + + L +D+ YN
Sbjct: 252 FLKSMPNLKVLDVSNNKITDINSISNLNGIEELNISSNYIRDIKILENFKNLSKVDLRYN 311
Query: 246 KISIIQNIAHLTELQEFWIN 265
I I+ + + +L E +++
Sbjct: 312 NIKNIEPLKNCKQLSEVFVD 331
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 90/167 (53%), Gaps = 1/167 (0%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N + I + L LKE+ L++N + E + + L ++L+ N ++K ++ L
Sbjct: 176 LNRNHVADISILPTLKNLKEIYLHNNGVIDFEPILKMQQLTTVNLAGNNFTDMKDINQLK 235
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL +LY+ N I + + + LKVL++ +NKI I ++ L +EEL + N I I
Sbjct: 236 NLIELYIGDNGIKDLTFLKSMPNLKVLDVSNNKITDINSISNLNGIEELNISSNYIRDIK 295
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN-GLTTIENL 231
L + L+ + L+ N ++ IE L+ L+++++ ++ + IEN+
Sbjct: 296 ILENFKNLSKVDLRYNNIKNIEPLKNCKQLSEVFVDKDVDIRPIENM 342
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 139 KIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSL 198
++ +V +KKL G + IENL L+EL L N+I I L+SL ++IL L
Sbjct: 76 RLRDVVDIKKLDASNKGIQNLDGIENLLR---LQELDLTDNEIDDISALSSLKDISILKL 132
Query: 199 QCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ I +L+ + L +LYL +N + I L + EK+ LD+ N ++ I + L
Sbjct: 133 GKNKITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKN 192
Query: 259 LQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
L+E ++++N V D+ + ++ QL T+ L N
Sbjct: 193 LKEIYLHNNGVIDFEPILKMQ---QLTTVNLAGN 223
>gi|434386116|ref|YP_007096727.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
PCC 6605]
gi|428017106|gb|AFY93200.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
PCC 6605]
Length = 365
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 125/216 (57%), Gaps = 3/216 (1%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L L +L+L D ++ IE + +NL+ +DLS + + +++ L L NL+ + + +S
Sbjct: 71 LLKLTQLDLVDREIKNIEPIADFVNLQSIDLSESAVVDLQPLAELVNLQSISISRTSVSD 130
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
++ + L KLK + + + I+ L LTN+E L L K+K+ I+ LA LTKL I+ L+
Sbjct: 131 LQPLAKLTKLKQVSAAETPLSNIQPLANLTNIEFLNLSKSKVVNIEPLAKLTKLRIIFLE 190
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
+ ++ L LTNL+ LYL +N + + L + L+ L ++ N+I IQ +A+LT L
Sbjct: 191 QTGVENLQPLANLTNLSSLYLKKNKIGNLTGLNNLTNLKELYLSENRIDNIQPLANLTNL 250
Query: 260 QEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
Q W++ NQ+ D + L N K++ + LD+N ++
Sbjct: 251 QLLWLDSNQIDD---LLPLTNLKKINFLILDKNKIS 283
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 129/225 (57%), Gaps = 9/225 (4%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
+ ++ + LT LK++ + L+ I+ L L N+E L+LS +++ I+ L L L +
Sbjct: 128 VSDLQPLAKLTKLKQVSAAETPLSNIQPLANLTNIEFLNLSKSKVVNIEPLAKLTKLRII 187
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L + ++ + +L L L L NKI + L+ LTNL+ELYL +N+I I LA+L
Sbjct: 188 FLEQTGVENLQPLANLTNLSSLYLKKNKIGNLTGLNNLTNLKELYLSENRIDNIQPLANL 247
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQ---LYLSENGLTTIENLLSNEKLETLDVAYNKI 247
T L +L L N+ I++L LTNL + L L +N ++ +E L+ LETL ++ NKI
Sbjct: 248 TNLQLLWLDSNQ---IDDLLPLTNLKKINFLILDKNKISNLEPLVDLNNLETLYLSNNKI 304
Query: 248 SIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
S ++ ++ L L+ I +NQ+SD ++ L N +L+ I L+ N
Sbjct: 305 SNVKPLSKLVNLKTLLIRNNQISD---ISSLVNLPKLEGIELNGN 346
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 110/196 (56%)
Query: 74 IENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLC 133
I+ + LT ++ L L +++ IE L L L I+ L + ++ L +L NL LYL
Sbjct: 153 IQPLANLTNIEFLNLSKSKVVNIEPLAKLTKLRIIFLEQTGVENLQPLANLTNLSSLYLK 212
Query: 134 SNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKL 193
NKI + +++L LK L L +N+I I+ L LTNL+ L+L N+I + L +L K+
Sbjct: 213 KNKIGNLTGLNNLTNLKELYLSENRIDNIQPLANLTNLQLLWLDSNQIDDLLPLTNLKKI 272
Query: 194 NILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNI 253
N L L N++ +E L L NL LYLS N ++ ++ L L+TL + N+IS I ++
Sbjct: 273 NFLILDKNKISNLEPLVDLNNLETLYLSNNKISNVKPLSKLVNLKTLLIRNNQISDISSL 332
Query: 254 AHLTELQEFWINDNQV 269
+L +L+ +N N+
Sbjct: 333 VNLPKLEGIELNGNRF 348
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 102/181 (56%), Gaps = 9/181 (4%)
Query: 73 KIENIHMLTTLKELELYDNQLTVIENLDTLINL---EILDLSFNRIREIKGLDHLANLEK 129
K+ NI L L +L + + T +ENL L NL L L N+I + GL++L NL++
Sbjct: 171 KVVNIEPLAKLTKLRIIFLEQTGVENLQPLANLTNLSSLYLKKNKIGNLTGLNNLTNLKE 230
Query: 130 LYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEE---LYLGKNKISRIDN 186
LYL N+I I+ + +L L++L L N+ I++L LTNL++ L L KNKIS ++
Sbjct: 231 LYLSENRIDNIQPLANLTNLQLLWLDSNQ---IDDLLPLTNLKKINFLILDKNKISNLEP 287
Query: 187 LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK 246
L L L L L N++ ++ L L NL L + N ++ I +L++ KLE +++ N+
Sbjct: 288 LVDLNNLETLYLSNNKISNVKPLSKLVNLKTLLIRNNQISDISSLVNLPKLEGIELNGNR 347
Query: 247 I 247
Sbjct: 348 F 348
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 97/180 (53%), Gaps = 9/180 (5%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
++ ++ + LT L L L N++ + L+ L NL+ L LS NRI I+ L +L NL+ L
Sbjct: 194 VENLQPLANLTNLSSLYLKKNKIGNLTGLNNLTNLKELYLSENRIDNIQPLANLTNLQLL 253
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L SN+I + + +LKK+ L L NKI +E L L NLE LYL NKIS + L+ L
Sbjct: 254 WLDSNQIDDLLPLTNLKKINFLILDKNKISNLEPLVDLNNLETLYLSNNKISNVKPLSKL 313
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
L L ++ N++ I +L L L + L+ N +K E+ +A KIS I
Sbjct: 314 VNLKTLLIRNNQISDISSLVNLPKLEGIELNGNRF---------DKTESCPLAKPKISCI 364
>gi|168179599|ref|ZP_02614263.1| putative internalin [Clostridium botulinum NCTC 2916]
gi|182669866|gb|EDT81842.1| putative internalin [Clostridium botulinum NCTC 2916]
Length = 364
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 128/224 (57%), Gaps = 3/224 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I+ ++ I L L+EL+L DN++ I L +L ++ IL L N+I +I L + + L++L
Sbjct: 93 IQNLDGIENLLRLQELDLTDNEIDDISALSSLKDISILKLGKNKITDIASLKNCSKLKEL 152
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
YL NK+ I + + +K+ +L+L N + I L L NL+E+YL N + + + +
Sbjct: 153 YLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKNLKEIYLHNNGVIDFEPILKM 212
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+L ++L N ++++ L NL +LY+ +NG+ + L S L+ LDV+ NKI+ I
Sbjct: 213 QQLTTVNLAGNNFTDMKDINQLKNLIELYIGDNGIKDLTFLKSMPNLKVLDVSNNKITDI 272
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
+I++L ++E I+ N + D + +LEN K L + L N +
Sbjct: 273 NSISNLNGIEELNISSNYIRD---IKILENFKNLSKVDLRYNNI 313
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 104/186 (55%)
Query: 99 LDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
L +++++ LD S I+ + G+++L L++L L N+I I + LK + +L+LG NK
Sbjct: 77 LRDVVDIKKLDASNKGIQNLDGIENLLRLQELDLTDNEIDDISALSSLKDISILKLGKNK 136
Query: 159 IRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
I I +L + L+ELYL NK+ I L + K+ IL L N + I L L NL ++
Sbjct: 137 ITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKNLKEI 196
Query: 219 YLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
YL NG+ E +L ++L T+++A N + +++I L L E +I DN + D + +
Sbjct: 197 YLHNNGVIDFEPILKMQQLTTVNLAGNNFTDMKDINQLKNLIELYIGDNGIKDLTFLKSM 256
Query: 279 ENNKQL 284
N K L
Sbjct: 257 PNLKVL 262
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 133/260 (51%), Gaps = 8/260 (3%)
Query: 6 VPNTDEVDNDNLVTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIERLL 65
V + ++D N N++ +EN Q LD D E + + S +D I L
Sbjct: 80 VVDIKKLDASNKGIQNLDGIENLLRLQ-ELDLTDNEIDDISALSSLKD-------ISILK 131
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I I ++ + LKEL L+DN++ I L + ILDL+ N + +I L L
Sbjct: 132 LGKNKITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLK 191
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL+++YL +N + E + +++L + L N +++++ L NL ELY+G N I +
Sbjct: 192 NLKEIYLHNNGVIDFEPILKMQQLTTVNLAGNNFTDMKDINQLKNLIELYIGDNGIKDLT 251
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L S+ L +L + N++ I ++ L + +L +S N + I+ L + + L +D+ YN
Sbjct: 252 FLKSMPNLKVLDVSNNKITDINSISNLNGIEELNISSNYIRDIKILENFKNLSKVDLRYN 311
Query: 246 KISIIQNIAHLTELQEFWIN 265
I I+ + + +L E +++
Sbjct: 312 NIKNIEPLKNCKQLSEVFVD 331
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 90/167 (53%), Gaps = 1/167 (0%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N + I + L LKE+ L++N + E + + L ++L+ N ++K ++ L
Sbjct: 176 LNRNHVADISILPTLKNLKEIYLHNNGVIDFEPILKMQQLTTVNLAGNNFTDMKDINQLK 235
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL +LY+ N I + + + LKVL++ +NKI I ++ L +EEL + N I I
Sbjct: 236 NLIELYIGDNGIKDLTFLKSMPNLKVLDVSNNKITDINSISNLNGIEELNISSNYIRDIK 295
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN-GLTTIENL 231
L + L+ + L+ N ++ IE L+ L+++++ ++ + IEN+
Sbjct: 296 ILENFKNLSKVDLRYNNIKNIEPLKNCKQLSEVFVDKDVDIRPIENM 342
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 139 KIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSL 198
++ +V +KKL G + IENL L+EL L N+I I L+SL ++IL L
Sbjct: 76 RLRDVVDIKKLDASNKGIQNLDGIENLLR---LQELDLTDNEIDDISALSSLKDISILKL 132
Query: 199 QCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ I +L+ + L +LYL +N + I L + EK+ LD+ N ++ I + L
Sbjct: 133 GKNKITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKN 192
Query: 259 LQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
L+E ++++N V D+ + ++ QL T+ L N
Sbjct: 193 LKEIYLHNNGVIDFEPILKMQ---QLTTVNLAGN 223
>gi|348500324|ref|XP_003437723.1| PREDICTED: leucine-rich repeat-containing protein 49-like
[Oreochromis niloticus]
Length = 615
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 116/201 (57%)
Query: 104 NLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE 163
+ + +DL + E LD + L+ L L N I+KI+++ HL++L +L L DN I +
Sbjct: 158 SFQRIDLERQSLEECPQLDFVKELQFLNLQHNLITKIQHLSHLQQLVLLNLHDNHISDMT 217
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
++ L +L L LGKN+I I L SL+KLN+L L N++ IEN+ L+ L L L+ N
Sbjct: 218 GIEVLRSLRILILGKNRIHEICCLDSLSKLNMLDLHDNQICRIENVSHLSELRVLNLAGN 277
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
++ +ENL + L L++ N IS++ + HL LQ +++ N ++ ++ + L +
Sbjct: 278 NISKVENLQGLDSLTELNLQQNCISVVTEVDHLPLLQRLFLSCNNITSFDQLACLGESCS 337
Query: 284 LQTIYLDRNPVAQDPNYRRKI 304
L + LD NPVA + Y++ +
Sbjct: 338 LSELTLDGNPVALETWYKQAV 358
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 110/204 (53%), Gaps = 17/204 (8%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L+ NLI KI+++ L L L L+DN ++ + ++ L +L IL L NRI EI LD L+
Sbjct: 186 LQHNLITKIQHLSHLQQLVLLNLHDNHISDMTGIEVLRSLRILILGKNRIHEICCLDSLS 245
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
L L L N+I +IENV HL +L+VL L N I +ENL GL +L EL L +N IS +
Sbjct: 246 KLNMLDLHDNQICRIENVSHLSELRVLNLAGNNISKVENLQGLDSLTELNLQQNCISVVT 305
Query: 186 NLASLTKLNILSLQCNRLRTIENLEAL---TNLTQLYLSENGLTTIENLLSNEKLETLDV 242
+ L L L L CN + + + L L +L++L L N + LET
Sbjct: 306 EVDHLPLLQRLFLSCNNITSFDQLACLGESCSLSELTLDGNPVA----------LET--- 352
Query: 243 AYNKISIIQNIAHLTELQEFWIND 266
+ K ++++ + HL +L I D
Sbjct: 353 -WYKQAVLRCVLHLRQLDMKRITD 375
>gi|354473498|ref|XP_003498972.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 1
[Cricetulus griseus]
gi|344248430|gb|EGW04534.1| Leucine-rich repeat-containing protein 49 [Cricetulus griseus]
Length = 752
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 174 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 230
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 231 KNRIKKISNLENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSL 290
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S ++ V+ L + L I D NP+AQ+
Sbjct: 291 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNISSFDNVSCLAESTSLSDITFDGNPIAQE 350
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 351 SWYKHTV 357
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 181 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 240
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 241 ENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 300
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +N+ L T L + +T N ++ E
Sbjct: 301 TFVRDVDNLPCLQRLFLSFNNISSFDNVSCLAESTSL----SDITFDGNPIAQE------ 350
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 351 -SWYKHTVLQNMMQLRQL 367
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 180 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISN 239
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 240 LENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQ 299
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L L +L+LS N +++ +N + +A T L +
Sbjct: 300 ITFVRDVDNLPCLQRLFLSFNNISSFDN-------------------VSCLAESTSLSDI 340
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 341 TFDGNPIAQESWYKHTVLQNMMQLRQLDMKR 371
>gi|328774296|gb|EGF84333.1| hypothetical protein BATDEDRAFT_22283 [Batrachochytrium
dendrobatidis JAM81]
Length = 660
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 95/161 (59%), Gaps = 3/161 (1%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N I +IEN+H L L L+LY+N + I L+ L+NL +L L NRIR I+ LD L L+
Sbjct: 201 NFISRIENLHNLINLVFLDLYNNHIEKICGLECLVNLRVLMLGRNRIRLIENLDELVKLD 260
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
L L SN+I+ IEN+ L L+VL L DN I I L L + EL L KNKI ID +
Sbjct: 261 LLDLHSNQITTIENIGKLSSLRVLNLEDNLIERIPTLTELVTIGELNLKKNKIKYIDTNS 320
Query: 189 SLTKLNILSLQCNRLRTIENLEA---LTNLTQLYLSENGLT 226
L L L L N++ T+ N+ A + NLT+L + +N +T
Sbjct: 321 HLEHLRRLMLSDNKISTLNNVSAVFDIPNLTELTMEQNAVT 361
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 90/149 (60%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L DN ++ IENL LINL LDL N I +I GL+ L NL L L N+I IEN
Sbjct: 193 LQSLNYQDNFISRIENLHNLINLVFLDLYNNHIEKICGLECLVNLRVLMLGRNRIRLIEN 252
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D L KL +L+L N+I IEN+ L++L L L N I RI L L + L+L+ N+
Sbjct: 253 LDELVKLDLLDLHSNQITTIENIGKLSSLRVLNLEDNLIERIPTLTELVTIGELNLKKNK 312
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENL 231
++ I+ L +L +L LS+N ++T+ N+
Sbjct: 313 IKYIDTNSHLEHLRRLMLSDNKISTLNNV 341
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 88/176 (50%), Gaps = 22/176 (12%)
Query: 148 KLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIE 207
+L+ L DN I IENL L NL L L N I +I L L L +L L NR+R IE
Sbjct: 192 QLQSLNYQDNFISRIENLHNLINLVFLDLYNNHIEKICGLECLVNLRVLMLGRNRIRLIE 251
Query: 208 NLEALTNLTQLYLSENGLTTIENL--LSN-----------EKLET---------LDVAYN 245
NL+ L L L L N +TTIEN+ LS+ E++ T L++ N
Sbjct: 252 NLDELVKLDLLDLHSNQITTIENIGKLSSLRVLNLEDNLIERIPTLTELVTIGELNLKKN 311
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYR 301
KI I +HL L+ ++DN++S N V+ + + L + +++N V + YR
Sbjct: 312 KIKYIDTNSHLEHLRRLMLSDNKISTLNNVSAVFDIPNLTELTMEQNAVTELNKYR 367
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 55/103 (53%)
Query: 165 LDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENG 224
L G L+ L N ISRI+NL +L L L L N + I LE L NL L L N
Sbjct: 187 LSGEEQLQSLNYQDNFISRIENLHNLINLVFLDLYNNHIEKICGLECLVNLRVLMLGRNR 246
Query: 225 LTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDN 267
+ IENL KL+ LD+ N+I+ I+NI L+ L+ + DN
Sbjct: 247 IRLIENLDELVKLDLLDLHSNQITTIENIGKLSSLRVLNLEDN 289
>gi|423099414|ref|ZP_17087121.1| repeat protein, partial [Listeria innocua ATCC 33091]
gi|370794180|gb|EHN61968.1| repeat protein, partial [Listeria innocua ATCC 33091]
Length = 456
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 112/192 (58%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L T+ L L ++ IE ++ L NL L LS N++ +I L L NL L L N IS
Sbjct: 70 LDTINSLTLTSKGISSIEGMNYLTNLGTLILSSNQVSDISPLKGLTNLTMLQLSGNPISD 129
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I + +LK L+ L++ D +I I L GLTNL+ L L N++ + + +L +L L++
Sbjct: 130 ISALSNLKNLQALDINDAQITDITPLSGLTNLKGLGLYNNQLENLSGVNNLQQLRSLNVS 189
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N+L +++L+AL+NL LY + N + ++ L + + L LD++ N+I +A LT +
Sbjct: 190 NNKLTNLDDLQALSNLGVLYANGNQINNLQGLSTLKNLFLLDLSTNQIVDTTPLAGLTNV 249
Query: 260 QEFWINDNQVSD 271
Q ++++NQ+SD
Sbjct: 250 QTLYLSNNQISD 261
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 115/199 (57%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+L N + I + LT L L+L N ++ I L L NL+ LD++ +I +I
Sbjct: 95 LGTLILSSNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQITDITP 154
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L +N++ + V++L++L+ L + +NK+ +++L L+NL LY N+
Sbjct: 155 LSGLTNLKGLGLYNNQLENLSGVNNLQQLRSLNVSNNKLTNLDDLQALSNLGVLYANGNQ 214
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + L++L L +L L N++ L LTN+ LYLS N ++ + L S L+ L
Sbjct: 215 INNLQGLSTLKNLFLLDLSTNQIVDTTPLAGLTNVQTLYLSNNQISDVTGLSSLINLDWL 274
Query: 241 DVAYNKISIIQNIAHLTEL 259
D++ NKIS I+ + LT+L
Sbjct: 275 DISQNKISNIRPLNSLTKL 293
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 117/222 (52%), Gaps = 6/222 (2%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I L L I IE ++ LT L L L NQ++ I L L NL +L LS N I +I
Sbjct: 72 TINSLTLTSKGISSIEGMNYLTNLGTLILSSNQVSDISPLKGLTNLTMLQLSGNPISDIS 131
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY---L 176
L +L NL+ L + +I+ I + L LK L L +N++ ENL G+ NL++L +
Sbjct: 132 ALSNLKNLQALDINDAQITDITPLSGLTNLKGLGLYNNQL---ENLSGVNNLQQLRSLNV 188
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEK 236
NK++ +D+L +L+ L +L N++ ++ L L NL L LS N + L
Sbjct: 189 SNNKLTNLDDLQALSNLGVLYANGNQINNLQGLSTLKNLFLLDLSTNQIVDTTPLAGLTN 248
Query: 237 LETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
++TL ++ N+IS + ++ L L I+ N++S+ +N L
Sbjct: 249 VQTLYLSNNQISDVTGLSSLINLDWLDISQNKISNIRPLNSL 290
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%)
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
I++I D L K LG + + L + L L IS I+ + LT L L
Sbjct: 39 INQIFPDDALAKEIQTALGKSSTAEVVTQTDLDTINSLTLTSKGISSIEGMNYLTNLGTL 98
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
L N++ I L+ LTNLT L LS N ++ I L + + L+ LD+ +I+ I ++ L
Sbjct: 99 ILSSNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQITDITPLSGL 158
Query: 257 TELQEFWINDNQVSDWNTVNVLENNKQL 284
T L+ + +NQ+ + + VN L+ + L
Sbjct: 159 TNLKGLGLYNNQLENLSGVNNLQQLRSL 186
>gi|449471454|ref|XP_002195125.2| PREDICTED: leucine-rich repeat-containing protein 49 [Taeniopygia
guttata]
Length = 798
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G DHL L N I++I+N+ +L L L+L DN+I I + L +L L LG
Sbjct: 223 IDGEDHL---RLLNFQHNFITRIQNISNLHHLVFLDLYDNQIEEISGVSTLRSLRVLLLG 279
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L+ L L L+ N LT +ENL + L
Sbjct: 280 KNRIKKISNLENLKNLDVLDLHGNQIAKIENIGHLSELRVLNLARNLLTVVENLNGLDSL 339
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N++S I+++ L LQ +++ N +S + + L ++ L I LD NP+AQ+
Sbjct: 340 TELNLRHNQVSAIKDVDTLPCLQRLFLSFNNISSFEDILCLADSSSLSDITLDGNPIAQE 399
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 400 TWYKHTV 406
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 99/157 (63%), Gaps = 1/157 (0%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I + TL +L +L L NRI++I L
Sbjct: 230 RLLNFQHNFITRIQNISNLHHLVFLDLYDNQIEEISGVSTLRSLRVLLLGKNRIKKISNL 289
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIEN+ HL +L+VL L N + ++ENL+GL +L EL L N++
Sbjct: 290 ENLKNLDVLDLHGNQIAKIENIGHLSELRVLNLARNLLTVVENLNGLDSLTELNLRHNQV 349
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
S I ++ +L L L L N + + E++ L + + L
Sbjct: 350 SAIKDVDTLPCLQRLFLSFNNISSFEDILCLADSSSL 386
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 93/150 (62%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L +L LDL N+I EI G+ L +L L L N+I KI N
Sbjct: 229 LRLLNFQHNFITRIQNISNLHHLVFLDLYDNQIEEISGVSTLRSLRVLLLGKNRIKKISN 288
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN+ L+ L L L +N ++ ++NL L L L+L+ N+
Sbjct: 289 LENLKNLDVLDLHGNQIAKIENIGHLSELRVLNLARNLLTVVENLNGLDSLTELNLRHNQ 348
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLL 232
+ I++++ L L +L+LS N +++ E++L
Sbjct: 349 VSAIKDVDTLPCLQRLFLSFNNISSFEDIL 378
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
LLL N IKKI N+ L L L+L+ NQ+ IEN+ L L +L+L+ N + ++ L+
Sbjct: 276 LLLGKNRIKKISNLENLKNLDVLDLHGNQIAKIENIGHLSELRVLNLARNLLTVVENLNG 335
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGL---TNLEELYLGKNK 180
L +L +L L N++S I++VD L L+ L L N I E++ L ++L ++ L N
Sbjct: 336 LDSLTELNLRHNQVSAIKDVDTLPCLQRLFLSFNNISSFEDILCLADSSSLSDITLDGNP 395
Query: 181 ISR 183
I++
Sbjct: 396 IAQ 398
>gi|354473500|ref|XP_003498973.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 2
[Cricetulus griseus]
Length = 746
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 168 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 224
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 225 KNRIKKISNLENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSL 284
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S ++ V+ L + L I D NP+AQ+
Sbjct: 285 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNISSFDNVSCLAESTSLSDITFDGNPIAQE 344
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 345 SWYKHTV 351
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 175 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 234
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 235 ENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 294
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + +N+ L T L + +T N ++ E
Sbjct: 295 TFVRDVDNLPCLQRLFLSFNNISSFDNVSCLAESTSL----SDITFDGNPIAQE------ 344
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 345 -SWYKHTVLQNMMQLRQL 361
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 174 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISN 233
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 234 LENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQ 293
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L L +L+LS N +++ +N + +A T L +
Sbjct: 294 ITFVRDVDNLPCLQRLFLSFNNISSFDN-------------------VSCLAESTSLSDI 334
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 335 TFDGNPIAQESWYKHTVLQNMMQLRQLDMKR 365
>gi|170758807|ref|YP_001788425.1| internalin [Clostridium botulinum A3 str. Loch Maree]
gi|169405796|gb|ACA54207.1| leucine-rich repeat protein [Clostridium botulinum A3 str. Loch
Maree]
Length = 364
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 129/224 (57%), Gaps = 3/224 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I+ ++ I L L+EL+L DN++ I L++L ++ IL L N+I +I L + + L++L
Sbjct: 93 IQNLDGIENLLRLQELDLTDNEIDDISTLNSLKDISILKLGKNKITDIASLKNCSKLKEL 152
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
YL NK+ I + + +K+ +L+L N + I L L NL+E+YL N + + + +
Sbjct: 153 YLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKNLKEIYLHNNGVIDFEPILRM 212
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+L ++L N ++N+ L +L +LY+ +NG+ + L S L+ LDV+ NKI+ +
Sbjct: 213 QQLTTVNLAGNNFTDMKNINQLKSLMELYIGDNGIKDLTFLKSMSNLKVLDVSNNKITDM 272
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
+I++L ++E I+ N + D + +LEN K L + L N +
Sbjct: 273 NSISNLNGIEELNISSNNIRD---IKILENFKNLSKVDLRYNNI 313
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 105/186 (56%)
Query: 99 LDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
L +++++ LD S I+ + G+++L L++L L N+I I ++ LK + +L+LG NK
Sbjct: 77 LRDVVDIKKLDASNKGIQNLDGIENLLRLQELDLTDNEIDDISTLNSLKDISILKLGKNK 136
Query: 159 IRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
I I +L + L+ELYL NK+ I L + K+ IL L N + I L L NL ++
Sbjct: 137 ITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKNLKEI 196
Query: 219 YLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
YL NG+ E +L ++L T+++A N + ++NI L L E +I DN + D + +
Sbjct: 197 YLHNNGVIDFEPILRMQQLTTVNLAGNNFTDMKNINQLKSLMELYIGDNGIKDLTFLKSM 256
Query: 279 ENNKQL 284
N K L
Sbjct: 257 SNLKVL 262
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 135/260 (51%), Gaps = 8/260 (3%)
Query: 6 VPNTDEVDNDNLVTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIERLL 65
V + ++D N N++ +EN Q LD D E + +T + +D I L
Sbjct: 80 VVDIKKLDASNKGIQNLDGIENLLRLQ-ELDLTDNEIDDISTLNSLKD-------ISILK 131
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I I ++ + LKEL L+DN++ I L + ILDL+ N + +I L L
Sbjct: 132 LGKNKITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLK 191
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL+++YL +N + E + +++L + L N ++N++ L +L ELY+G N I +
Sbjct: 192 NLKEIYLHNNGVIDFEPILRMQQLTTVNLAGNNFTDMKNINQLKSLMELYIGDNGIKDLT 251
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L S++ L +L + N++ + ++ L + +L +S N + I+ L + + L +D+ YN
Sbjct: 252 FLKSMSNLKVLDVSNNKITDMNSISNLNGIEELNISSNNIRDIKILENFKNLSKVDLRYN 311
Query: 246 KISIIQNIAHLTELQEFWIN 265
I I+ + + +L E +++
Sbjct: 312 NIKNIEPLKNCKQLGEVFLD 331
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N + I + L LKE+ L++N + E + + L ++L+ N ++K ++ L
Sbjct: 176 LNRNHVADISILPTLKNLKEIYLHNNGVIDFEPILRMQQLTTVNLAGNNFTDMKNINQLK 235
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+L +LY+ N I + + + LKVL++ +NKI + ++ L +EEL + N I I
Sbjct: 236 SLMELYIGDNGIKDLTFLKSMSNLKVLDVSNNKITDMNSISNLNGIEELNISSNNIRDIK 295
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN-GLTTIENL 231
L + L+ + L+ N ++ IE L+ L +++L ++ + IEN+
Sbjct: 296 ILENFKNLSKVDLRYNNIKNIEPLKNCKQLGEVFLDKDVDIRPIENM 342
>gi|148694051|gb|EDL25998.1| leucine rich repeat containing 49, isoform CRA_b [Mus musculus]
Length = 684
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 106 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLG 162
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 163 KNRIKKISNLENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSL 222
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N ++ + +V+ L + L I D NP+AQ+
Sbjct: 223 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNITSFESVSCLAESTSLSDITFDGNPIAQE 282
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 283 SWYKHTV 289
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 113 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISNL 172
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 173 ENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 232
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + E++ L T L + +T N ++ E
Sbjct: 233 TFVRDVDNLPCLQRLFLSFNNITSFESVSCLAESTSL----SDITFDGNPIAQE------ 282
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 283 -SWYKHTVLQNMMQLRQL 299
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 112 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISN 171
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 172 LENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQ 231
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L L +L+LS N +T+ E+ + +A T L +
Sbjct: 232 ITFVRDVDNLPCLQRLFLSFNNITSFES-------------------VSCLAESTSLSDI 272
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 273 TFDGNPIAQESWYKHTVLQNMMQLRQLDMKR 303
>gi|443328001|ref|ZP_21056606.1| Leucine Rich Repeat (LRR)-containing protein [Xenococcus sp. PCC
7305]
gi|442792410|gb|ELS01892.1| Leucine Rich Repeat (LRR)-containing protein [Xenococcus sp. PCC
7305]
Length = 275
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 112/211 (53%), Gaps = 22/211 (10%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I RL L + I + + LT L +L +Y+NQ++ I L +L NL L L +N++ +I
Sbjct: 74 ITRLNLISSEISDVRPLGSLTNLTQLVIYNNQISDISPLSSLTNLRTLQLGYNQVSDISP 133
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL L L N++S + + L L +L L NKI I L LTNL ELYLG+NK
Sbjct: 134 LASLTNLTLLGLLRNQVSDLTPLASLPNLSILRLNQNKISDISPLGSLTNLTELYLGRNK 193
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS I L+SLT L+ L L N++ + L +L NL++L L
Sbjct: 194 ISDISALSSLTNLDELDLNSNQISDVRPLSSLINLSKLNLDR------------------ 235
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
N+IS ++ + +LT L E ++N+N S+
Sbjct: 236 ----NQISNVRPLGNLTNLSELYLNNNPASN 262
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 113/202 (55%), Gaps = 12/202 (5%)
Query: 108 LDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG 167
L+L + I +++ L L NL +L + +N+IS I + L L+ L+LG N++ I L
Sbjct: 77 LNLISSEISDVRPLGSLTNLTQLVIYNNQISDISPLSSLTNLRTLQLGYNQVSDISPLAS 136
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
LTNL L L +N++S + LASL L+IL L N++ I L +LTNLT+LYL N ++
Sbjct: 137 LTNLTLLGLLRNQVSDLTPLASLPNLSILRLNQNKISDISPLGSLTNLTELYLGRNKISD 196
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
I L S L+ LD+ N+IS ++ ++ L L + ++ NQ+S+ V L N L +
Sbjct: 197 ISALSSLTNLDELDLNSNQISDVRPLSSLINLSKLNLDRNQISN---VRPLGNLTNLSEL 253
Query: 288 YLDRNPVAQDPNYRRKIKLVCP 309
YL+ NP + VCP
Sbjct: 254 YLNNNPASNQ---------VCP 266
>gi|46906647|ref|YP_013036.1| internalin [Listeria monocytogenes serotype 4b str. F2365]
gi|405751633|ref|YP_006675098.1| internalin F [Listeria monocytogenes SLCC2378]
gi|424713287|ref|YP_007014002.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|46879912|gb|AAT03213.1| internalin [Listeria monocytogenes serotype 4b str. F2365]
gi|404220833|emb|CBY72196.1| internalin F (LPXTG motif) [Listeria monocytogenes SLCC2378]
gi|424012471|emb|CCO63011.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
Length = 823
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 127/256 (49%), Gaps = 26/256 (10%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L++ + I+ I LT L+ L L NQ+T I L L+ L L + N+I +I
Sbjct: 78 SITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDIS 137
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN---------------------- 157
L +L NL +LYL + IS I + +L K+ L LG N
Sbjct: 138 ALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTE 197
Query: 158 -KIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
K++ + + LT+L L L N+I I LASLT L+ + N++ I + +T L
Sbjct: 198 SKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLN 257
Query: 217 QLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN 276
L + N +T + L + +L L++ N+IS I + LT+L+ + NQ+SD ++
Sbjct: 258 SLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISD---IS 314
Query: 277 VLENNKQLQTIYLDRN 292
VL N QL +++L+ N
Sbjct: 315 VLNNLSQLNSLFLNNN 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 2/175 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
+K + I LT L L L NQ+ I L +L +L N+I +I + ++ L L
Sbjct: 200 VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL 259
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+ +NKI+ + + +L +L LE+G N+I I + LT L+ L +G N+IS I L +L
Sbjct: 260 KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVLNNL 319
Query: 191 TKLNILSLQCNRLRT--IENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
++LN L L N+L +E + LTNLT L+LS+N +T I L S K+++ D A
Sbjct: 320 SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFA 374
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 187 LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK 246
L S+TKL + ++ +I+ +E LTNL L L+ N +T I L + KL L + NK
Sbjct: 76 LESITKLVV---AGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNK 132
Query: 247 ISIIQNIAHLTELQEFWINDNQVSD 271
I+ I + +LT L+E ++N++ +SD
Sbjct: 133 ITDISALQNLTNLRELYLNEDNISD 157
>gi|160879955|ref|YP_001558923.1| leucine-rich repeat-containing protein [Clostridium phytofermentans
ISDg]
gi|160428621|gb|ABX42184.1| leucine-rich repeat protein [Clostridium phytofermentans ISDg]
Length = 772
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 122/225 (54%), Gaps = 3/225 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I I L ++ L L N ++ I L L LE+L L+ N+I I L L NL +L
Sbjct: 530 IKDITAIGNLKNIRVLYLQRNLVSDISALKKLTKLEVLSLNGNQIESISALSTLTNLREL 589
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
Y+ NKI I +++ L KL +LE G N ++ I++L L N++ L L N I I L L
Sbjct: 590 YIRENKIKNISSLNKLTKLILLEGGKNNLQNIDSLKNLKNIKSLTLDNNIIKDITGLKVL 649
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T L L L N++ +I L+ L+ L LYL N +T I + + +KL+ L + NKIS +
Sbjct: 650 TNLKYLDLSNNKITSINALKNLSGLETLYLQRNSITDISAISTLKKLKLLSMNGNKISDV 709
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+ + L L++ ++ DN++ ++ L N L +YL N V+
Sbjct: 710 KPLTKLANLEKLYLKDNKIKSIASLKGLVN---LNELYLMGNSVS 751
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 123/222 (55%), Gaps = 7/222 (3%)
Query: 74 IENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLC 133
+E +H + LK + +++L+ L NLE LD I++I + +L N+ LYL
Sbjct: 493 VEELHGIYRLK----LPKGVKSLKDLNKLANLEYLDAGQLGIKDITAIGNLKNIRVLYLQ 548
Query: 134 SNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKL 193
N +S I + L KL+VL L N+I I L LTNL ELY+ +NKI I +L LTKL
Sbjct: 549 RNLVSDISALKKLTKLEVLSLNGNQIESISALSTLTNLRELYIRENKIKNISSLNKLTKL 608
Query: 194 NILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNI 253
+L N L+ I++L+ L N+ L L N + I L L+ LD++ NKI+ I +
Sbjct: 609 ILLEGGKNNLQNIDSLKNLKNIKSLTLDNNIIKDITGLKVLTNLKYLDLSNNKITSINAL 668
Query: 254 AHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+L+ L+ ++ N ++D + ++ L K+L+ + ++ N ++
Sbjct: 669 KNLSGLETLYLQRNSITDISAISTL---KKLKLLSMNGNKIS 707
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 115/224 (51%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L+ NL+ I + LT L+ L L NQ+ I L TL NL L + N+I+ I
Sbjct: 542 IRVLYLQRNLVSDISALKKLTKLEVLSLNGNQIESISALSTLTNLRELYIRENKIKNISS 601
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L L L N + I+++ +LK +K L L +N I+ I L LTNL+ L L NK
Sbjct: 602 LNKLTKLILLEGGKNNLQNIDSLKNLKNIKSLTLDNNIIKDITGLKVLTNLKYLDLSNNK 661
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ I+ L +L+ L L LQ N + I + L L L ++ N ++ ++ L LE L
Sbjct: 662 ITSINALKNLSGLETLYLQRNSITDISAISTLKKLKLLSMNGNKISDVKPLTKLANLEKL 721
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQL 284
+ NKI I ++ L L E ++ N VS+++ V + K
Sbjct: 722 YLKDNKIKSIASLKGLVNLNELYLMGNSVSNYSPVKTMYAKKGF 765
>gi|254825773|ref|ZP_05230774.1| internalin [Listeria monocytogenes FSL J1-194]
gi|293595017|gb|EFG02778.1| internalin [Listeria monocytogenes FSL J1-194]
Length = 823
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 127/256 (49%), Gaps = 26/256 (10%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L++ + I+ I LT L+ L L NQ+T I L L+ L L + N+I +I
Sbjct: 78 SITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDIS 137
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN---------------------- 157
L +L NL +LYL + IS I + +L K+ L LG N
Sbjct: 138 ALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTE 197
Query: 158 -KIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
K++ + + LT+L L L N+I I LASLT L+ + N++ I + +T L
Sbjct: 198 SKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLN 257
Query: 217 QLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN 276
L + N +T + L + +L L++ N+IS I + LT+L+ + NQ+SD ++
Sbjct: 258 SLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISD---IS 314
Query: 277 VLENNKQLQTIYLDRN 292
VL N QL +++L+ N
Sbjct: 315 VLNNLSQLNSLFLNNN 330
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 2/175 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
+K + I LT L L L NQ+ I L +L +L N+I +I + ++ L L
Sbjct: 200 VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL 259
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+ +NKI+ + + +L +L LE+G N+I I + LT L+ L +G N+IS I L +L
Sbjct: 260 KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVLNNL 319
Query: 191 TKLNILSLQCNRLRT--IENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
++LN L L N+L +E + LTNLT L+LS+N +T I L S K+++ D A
Sbjct: 320 SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFA 374
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 187 LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK 246
L S+TKL + ++ +I+ +E LTNL L L+ N +T I L + KL L + NK
Sbjct: 76 LESITKLVV---AGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNK 132
Query: 247 ISIIQNIAHLTELQEFWINDNQVSD 271
I+ I + +LT L+E ++N++ +SD
Sbjct: 133 ITDISALQNLTNLRELYLNEDNISD 157
>gi|197333858|ref|NP_001127941.1| leucine-rich repeat-containing protein 49 [Rattus norvegicus]
gi|149041880|gb|EDL95721.1| leucine rich repeat containing 49 (predicted) [Rattus norvegicus]
gi|169642241|gb|AAI60848.1| Lrrc49 protein [Rattus norvegicus]
Length = 686
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N ++ + +V+ L + L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNITSFESVSCLAESTSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + E++ L T L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQRLFLSFNNITSFESVSCLAESTSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMMQLRQL 301
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 114 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISN 173
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 174 LENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQ 233
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L L +L+LS N +T+ E+ + +A T L +
Sbjct: 234 ITFVRDVDNLPCLQRLFLSFNNITSFES-------------------VSCLAESTSLSDI 274
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 275 TFDGNPIAQESWYKHTVLQNMMQLRQLDMKR 305
>gi|417316691|ref|ZP_12103332.1| internalin, peptidoglycan bound protein (LPXTG motif) [Listeria
monocytogenes J1-220]
gi|328476023|gb|EGF46741.1| internalin, peptidoglycan bound protein (LPXTG motif) [Listeria
monocytogenes J1-220]
Length = 830
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 127/256 (49%), Gaps = 26/256 (10%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L++ + I+ I LT L+ L L NQ+T I L L+ L L + N+I +I
Sbjct: 78 SITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDIS 137
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN---------------------- 157
L +L NL +LYL + IS I + +L K+ L LG N
Sbjct: 138 ALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTE 197
Query: 158 -KIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
K++ + + LT+L L L N+I I LASLT L+ + N++ I + +T L
Sbjct: 198 SKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLN 257
Query: 217 QLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN 276
L + N +T + L + +L L++ N+IS I + LT+L+ + NQ+SD ++
Sbjct: 258 SLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISD---IS 314
Query: 277 VLENNKQLQTIYLDRN 292
VL N QL +++L+ N
Sbjct: 315 VLNNLSQLNSLFLNNN 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 2/175 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
+K + I LT L L L NQ+ I L +L +L N+I +I + ++ L L
Sbjct: 200 VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL 259
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+ +NKI+ + + +L +L LE+G N+I I + LT L+ L +G N+IS I L +L
Sbjct: 260 KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVLNNL 319
Query: 191 TKLNILSLQCNRLRT--IENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
++LN L L N+L +E + LTNLT L+LS+N +T I L S K+++ D A
Sbjct: 320 SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFA 374
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 187 LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK 246
L S+TKL + ++ +I+ +E LTNL L L+ N +T I L + KL L + NK
Sbjct: 76 LESITKLVV---AGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNK 132
Query: 247 ISIIQNIAHLTELQEFWINDNQVSD 271
I+ I + +LT L+E ++N++ +SD
Sbjct: 133 ITDISALQNLTNLRELYLNEDNISD 157
>gi|226223039|ref|YP_002757146.1| internalin, peptidoglycan bound protein (LPXTG motif) [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|386731175|ref|YP_006204671.1| internalin, peptidoglycan bound protein (LPXTG motif) [Listeria
monocytogenes 07PF0776]
gi|406703195|ref|YP_006753549.1| internalin F (LPXTG motif) [Listeria monocytogenes L312]
gi|225875501|emb|CAS04202.1| Putative internalin, peptidoglycan bound protein (LPXTG motif)
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|384389933|gb|AFH79003.1| internalin, peptidoglycan bound protein (LPXTG motif) [Listeria
monocytogenes 07PF0776]
gi|406360225|emb|CBY66498.1| internalin F (LPXTG motif) [Listeria monocytogenes L312]
Length = 823
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 127/256 (49%), Gaps = 26/256 (10%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L++ + I+ I LT L+ L L NQ+T I L L+ L L + N+I +I
Sbjct: 78 SITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDIS 137
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN---------------------- 157
L +L NL +LYL + IS I + +L K+ L LG N
Sbjct: 138 ALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTE 197
Query: 158 -KIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
K++ + + LT+L L L N+I I LASLT L+ + N++ I + +T L
Sbjct: 198 SKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLN 257
Query: 217 QLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN 276
L + N +T + L + +L L++ N+IS I + LT+L+ + NQ+SD ++
Sbjct: 258 SLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISD---IS 314
Query: 277 VLENNKQLQTIYLDRN 292
VL N QL +++L+ N
Sbjct: 315 VLNNLSQLNSLFLNNN 330
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 2/175 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
+K + I LT L L L NQ+ I L +L +L N+I +I + ++ L L
Sbjct: 200 VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL 259
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+ +NKI+ + + +L +L LE+G N+I I + LT L+ L +G N+IS I L +L
Sbjct: 260 KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVLNNL 319
Query: 191 TKLNILSLQCNRLRT--IENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
++LN L L N+L +E + LTNLT L+LS+N +T I L S K+++ D A
Sbjct: 320 SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFA 374
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 187 LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK 246
L S+TKL + ++ +I+ +E LTNL L L+ N +T I L + KL L + NK
Sbjct: 76 LESITKLVV---AGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNK 132
Query: 247 ISIIQNIAHLTELQEFWINDNQVSD 271
I+ I + +LT L+E ++N++ +SD
Sbjct: 133 ITDISALQNLTNLRELYLNEDNISD 157
>gi|47091555|ref|ZP_00229352.1| internalin [Listeria monocytogenes str. 4b H7858]
gi|254932714|ref|ZP_05266073.1| internalin [Listeria monocytogenes HPB2262]
gi|405748772|ref|YP_006672238.1| internalin F [Listeria monocytogenes ATCC 19117]
gi|417314456|ref|ZP_12101155.1| internalin, peptidoglycan bound protein (LPXTG motif) [Listeria
monocytogenes J1816]
gi|424822145|ref|ZP_18247158.1| Internalin [Listeria monocytogenes str. Scott A]
gi|47020232|gb|EAL10968.1| internalin [Listeria monocytogenes str. 4b H7858]
gi|293584270|gb|EFF96302.1| internalin [Listeria monocytogenes HPB2262]
gi|328467702|gb|EGF38754.1| internalin, peptidoglycan bound protein (LPXTG motif) [Listeria
monocytogenes J1816]
gi|332310825|gb|EGJ23920.1| Internalin [Listeria monocytogenes str. Scott A]
gi|404217972|emb|CBY69336.1| internalin F (LPXTG motif) [Listeria monocytogenes ATCC 19117]
Length = 823
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 127/256 (49%), Gaps = 26/256 (10%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L++ + I+ I LT L+ L L NQ+T I L L+ L L + N+I +I
Sbjct: 78 SITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDIS 137
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN---------------------- 157
L +L NL +LYL + IS I + +L K+ L LG N
Sbjct: 138 ALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTE 197
Query: 158 -KIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
K++ + + LT+L L L N+I I LASLT L+ + N++ I + +T L
Sbjct: 198 SKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLN 257
Query: 217 QLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN 276
L + N +T + L + +L L++ N+IS I + LT+L+ + NQ+SD ++
Sbjct: 258 SLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISD---IS 314
Query: 277 VLENNKQLQTIYLDRN 292
VL N QL +++L+ N
Sbjct: 315 VLNNLSQLNSLFLNNN 330
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 2/175 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
+K + I LT L L L NQ+ I L +L +L N+I +I + ++ L L
Sbjct: 200 VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL 259
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+ +NKI+ + + +L +L LE+G N+I I + LT L+ L +G N+IS I L +L
Sbjct: 260 KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVLNNL 319
Query: 191 TKLNILSLQCNRLRT--IENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
++LN L L N+L +E + LTNLT L+LS+N +T I L S K+++ D A
Sbjct: 320 SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFA 374
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 187 LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK 246
L S+TKL + ++ +I+ +E LTNL L L+ N +T I L + KL L + NK
Sbjct: 76 LESITKLVV---AGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNK 132
Query: 247 ISIIQNIAHLTELQEFWINDNQVSD 271
I+ I + +LT L+E ++N++ +SD
Sbjct: 133 ITDISALQNLTNLRELYLNEDNISD 157
>gi|217965554|ref|YP_002351232.1| internalin-A [Listeria monocytogenes HCC23]
gi|386007084|ref|YP_005925362.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes L99]
gi|386025670|ref|YP_005946446.1| hypothetical protein LMM7_0382 [Listeria monocytogenes M7]
gi|217334824|gb|ACK40618.1| internalin-A [Listeria monocytogenes HCC23]
gi|307569894|emb|CAR83073.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes L99]
gi|336022251|gb|AEH91388.1| hypothetical protein LMM7_0382 [Listeria monocytogenes M7]
Length = 589
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 111/192 (57%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L T+ L L ++ +E ++ L NL L LS N++ +I L L NL L L N IS
Sbjct: 70 LDTINSLTLTSKGISSLEGMNYLTNLGTLILSGNQVSDISPLKGLTNLTMLQLSGNPISD 129
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I + +LK L+ L++ D +I I L GLTNL+ L L N++ + + +L +L L++
Sbjct: 130 ISALSNLKNLQALDINDAQITDITPLSGLTNLKGLGLYDNQLENLSGVNNLHQLRSLNVS 189
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N+L ++ L+AL+NL LY +EN + ++ + + L LD++ N+I +A LT +
Sbjct: 190 KNKLTNLDELQALSNLGVLYANENQIDNLQGISALNNLFLLDLSANQIVDTTPLAGLTNV 249
Query: 260 QEFWINDNQVSD 271
Q ++++NQ+SD
Sbjct: 250 QTLYVSNNQISD 261
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 111/199 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+L N + I + LT L L+L N ++ I L L NL+ LD++ +I +I
Sbjct: 95 LGTLILSGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQITDITP 154
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L N++ + V++L +L+ L + NK+ ++ L L+NL LY +N+
Sbjct: 155 LSGLTNLKGLGLYDNQLENLSGVNNLHQLRSLNVSKNKLTNLDELQALSNLGVLYANENQ 214
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I + +++L L +L L N++ L LTN+ LY+S N ++ + L S L+ L
Sbjct: 215 IDNLQGISALNNLFLLDLSANQIVDTTPLAGLTNVQTLYVSNNQISDVTGLSSLINLDWL 274
Query: 241 DVAYNKISIIQNIAHLTEL 259
D++ NKIS I+ + LT+L
Sbjct: 275 DISQNKISNIRPLNSLTKL 293
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 128/250 (51%), Gaps = 12/250 (4%)
Query: 38 PDEE--SEAETTESKAEDEE----SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDN 91
PD +E +TT K+ E + I L L I +E ++ LT L L L N
Sbjct: 44 PDNALATEIQTTLGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYLTNLGTLILSGN 103
Query: 92 QLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKV 151
Q++ I L L NL +L LS N I +I L +L NL+ L + +I+ I + L LK
Sbjct: 104 QVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQITDITPLSGLTNLKG 163
Query: 152 LELGDNKIRIIENLDGLTNLEELY---LGKNKISRIDNLASLTKLNILSLQCNRLRTIEN 208
L L DN++ ENL G+ NL +L + KNK++ +D L +L+ L +L N++ ++
Sbjct: 164 LGLYDNQL---ENLSGVNNLHQLRSLNVSKNKLTNLDELQALSNLGVLYANENQIDNLQG 220
Query: 209 LEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQ 268
+ AL NL L LS N + L ++TL V+ N+IS + ++ L L I+ N+
Sbjct: 221 ISALNNLFLLDLSANQIVDTTPLAGLTNVQTLYVSNNQISDVTGLSSLINLDWLDISQNK 280
Query: 269 VSDWNTVNVL 278
+S+ +N L
Sbjct: 281 ISNIRPLNSL 290
>gi|254854137|ref|ZP_05243485.1| internalin [Listeria monocytogenes FSL R2-503]
gi|258607527|gb|EEW20135.1| internalin [Listeria monocytogenes FSL R2-503]
Length = 824
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 127/256 (49%), Gaps = 26/256 (10%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L++ + I+ I LT L+ L L NQ+T I L L+ L L + N+I +I
Sbjct: 78 SITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDIS 137
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN---------------------- 157
L +L NL +LYL + IS I + +L K+ L LG N
Sbjct: 138 ALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTE 197
Query: 158 -KIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
K++ + + LT+L L L N+I I LASLT L+ + N++ I + +T L
Sbjct: 198 SKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLN 257
Query: 217 QLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN 276
L + N +T + L + +L L++ N+IS I + LT+L+ + NQ+SD ++
Sbjct: 258 SLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISD---IS 314
Query: 277 VLENNKQLQTIYLDRN 292
VL N QL +++L+ N
Sbjct: 315 VLNNLSQLNSLFLNNN 330
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 2/175 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
+K + I LT L L L NQ+ I L +L +L N+I +I + ++ L L
Sbjct: 200 VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL 259
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+ +NKI+ + + +L +L LE+G N+I I + LT L+ L +G N+IS I L +L
Sbjct: 260 KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVLNNL 319
Query: 191 TKLNILSLQCNRLRT--IENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
++LN L L N+L +E + LTNLT L+LS+N +T I L S K+++ D A
Sbjct: 320 SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFA 374
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 187 LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK 246
L S+TKL + ++ +I+ +E LTNL L L+ N +T I L + KL L + NK
Sbjct: 76 LESITKLVV---AGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNK 132
Query: 247 ISIIQNIAHLTELQEFWINDNQVSD 271
I+ I + +LT L+E ++N++ +SD
Sbjct: 133 ITDISALQNLTNLRELYLNEDNISD 157
>gi|300765671|ref|ZP_07075649.1| internalin [Listeria monocytogenes FSL N1-017]
gi|404279969|ref|YP_006680867.1| internalin F [Listeria monocytogenes SLCC2755]
gi|404285784|ref|YP_006692370.1| internalin F [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|300513659|gb|EFK40728.1| internalin [Listeria monocytogenes FSL N1-017]
gi|404226604|emb|CBY48009.1| internalin F (LPXTG motif) [Listeria monocytogenes SLCC2755]
gi|404244713|emb|CBY02938.1| internalin F (LPXTG motif) [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 823
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 127/256 (49%), Gaps = 26/256 (10%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L++ + I+ I LT L+ L L NQ+T I L L+ L L + N+I +I
Sbjct: 78 SITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDIS 137
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN---------------------- 157
L +L NL +LYL + IS I + +L K+ L LG N
Sbjct: 138 ALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTE 197
Query: 158 -KIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
K++ + + LT+L L L N+I I LASLT L+ + N++ I + +T L
Sbjct: 198 SKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLN 257
Query: 217 QLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN 276
L + N +T + L + +L L++ N+IS I + LT+L+ + NQ+SD ++
Sbjct: 258 SLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISD---IS 314
Query: 277 VLENNKQLQTIYLDRN 292
VL N QL +++L+ N
Sbjct: 315 VLNNLSQLNSLFLNNN 330
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 2/175 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
+K + I LT L L L NQ+ I L +L +L N+I +I + ++ L L
Sbjct: 200 VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSL 259
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+ +NKI+ + + +L +L LE+G N+I I + LT L+ L +G N+IS I L +L
Sbjct: 260 KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVLNNL 319
Query: 191 TKLNILSLQCNRLRT--IENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
++LN L L N+L +E + LTNLT L+LS+N +T I L S K+++ D A
Sbjct: 320 SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFA 374
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 187 LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK 246
L S+TKL + ++ +I+ +E LTNL L L+ N +T I L + KL L + NK
Sbjct: 76 LESITKLVV---AGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNK 132
Query: 247 ISIIQNIAHLTELQEFWINDNQVSD 271
I+ I + +LT L+E ++N++ +SD
Sbjct: 133 ITDISALQNLTNLRELYLNEDNISD 157
>gi|225690570|ref|NP_001139518.1| leucine-rich repeat-containing protein 49 isoform 1 [Mus musculus]
gi|148694052|gb|EDL25999.1| leucine rich repeat containing 49, isoform CRA_c [Mus musculus]
Length = 686
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N ++ + +V+ L + L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNITSFESVSCLAESTSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + E++ L T L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQRLFLSFNNITSFESVSCLAESTSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMMQLRQL 301
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 114 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISN 173
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 174 LENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQ 233
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L L +L+LS N +T+ E+ + +A T L +
Sbjct: 234 ITFVRDVDNLPCLQRLFLSFNNITSFES-------------------VSCLAESTSLSDI 274
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 275 TFDGNPIAQESWYKHTVLQNMMQLRQLDMKR 305
>gi|81916249|sp|Q91YK0.1|LRC49_MOUSE RecName: Full=Leucine-rich repeat-containing protein 49; AltName:
Full=Tubulin polyglutamylase complex subunit 4;
Short=PGs4; AltName: Full=p79
gi|16741525|gb|AAH16574.1| Lrrc49 protein [Mus musculus]
Length = 686
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 111/187 (59%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N ++ + +V+ L + L I D NP+AQ+
Sbjct: 225 TELNLRHNQITFVRDVDNLPCLQRLFLSFNNITSFESVSCLAESTSLSDITFDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 285 SWYKHTV 291
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + E++ L T L + +T N ++ E
Sbjct: 235 TFVRDVDNLPCLQRLFLSFNNITSFESVSCLAESTSL----SDITFDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 285 -SWYKHTVLQNMMQLRQL 301
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 114 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISN 173
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 174 LENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQ 233
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L L +L+LS N +T+ E+ + +A T L +
Sbjct: 234 ITFVRDVDNLPCLQRLFLSFNNITSFES-------------------VSCLAESTSLSDI 274
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 275 TFDGNPIAQESWYKHTVLQNMMQLRQLDMKR 305
>gi|148694050|gb|EDL25997.1| leucine rich repeat containing 49, isoform CRA_a [Mus musculus]
Length = 770
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 105/170 (61%)
Query: 135 NKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLN 194
N I++I+N+ +L++L L+L DN+I I L L +L L LGKN+I +I NL +L L+
Sbjct: 206 NFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISNLENLKNLD 265
Query: 195 ILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIA 254
+L L N++ IEN+ L +L L L+ N L+ ++NL + L L++ +N+I+ ++++
Sbjct: 266 VLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQITFVRDVD 325
Query: 255 HLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKI 304
+L LQ +++ N ++ + +V+ L + L I D NP+AQ+ Y+ +
Sbjct: 326 NLPCLQRLFLSFNNITSFESVSCLAESTSLSDITFDGNPIAQESWYKHTV 375
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 199 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISNL 258
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 259 ENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 318
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + E++ L T L + +T N ++ E
Sbjct: 319 TFVRDVDNLPCLQRLFLSFNNITSFESVSCLAESTSL----SDITFDGNPIAQE------ 368
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 369 -SWYKHTVLQNMMQLRQL 385
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 198 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISN 257
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 258 LENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQ 317
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L L +L+LS N +T+ E+ + +A T L +
Sbjct: 318 ITFVRDVDNLPCLQRLFLSFNNITSFES-------------------VSCLAESTSLSDI 358
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 359 TFDGNPIAQESWYKHTVLQNMMQLRQLDMKR 389
>gi|427735492|ref|YP_007055036.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
gi|427370533|gb|AFY54489.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
7116]
Length = 344
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 134/247 (54%), Gaps = 4/247 (1%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L+ N I I+ + LT L +L L N ++ ++ L LINL L LS+N++ +KG+ +
Sbjct: 102 LKLKSNQISDIKPLSKLTNLTKLYLDSNNISQVKELANLINLTELSLSYNQLSHVKGITN 161
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L LE L L N+I+ I + +L L L+L N+I I+ L L NL EL + +NKI+
Sbjct: 162 LTKLEYLNLHRNQITDIRPLANLTNLIKLQLSSNQIESIKPLSKLNNLTELIVYQNKINE 221
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+ + +L L L++ N + ++ L LTNL +LY++EN ++ IE L L+ L +
Sbjct: 222 VKEITNLINLKYLNIGKNNISNVKPLWELTNLIELYINENKISNIETLADLSNLKELGLW 281
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRK 303
N+IS I + LT L + I +N++ D + L N L + NP+ Q+ K
Sbjct: 282 KNQISDITPLWQLTNLTKLNIQENKIID---IKALANLTNLTYLNAAGNPI-QNKTCPVK 337
Query: 304 IKLVCPW 310
K +C +
Sbjct: 338 PKSICKF 344
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 123/205 (60%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L+ L EL + D Q++ ++ + +L L L L N+I +IK L L NL KLYL SN IS+
Sbjct: 74 LSQLTELSVDDKQISDLQPVVSLTQLTELKLKSNQISDIKPLSKLTNLTKLYLDSNNISQ 133
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
++ + +L L L L N++ ++ + LT LE L L +N+I+ I LA+LT L L L
Sbjct: 134 VKELANLINLTELSLSYNQLSHVKGITNLTKLEYLNLHRNQITDIRPLANLTNLIKLQLS 193
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N++ +I+ L L NLT+L + +N + ++ + + L+ L++ N IS ++ + LT L
Sbjct: 194 SNQIESIKPLSKLNNLTELIVYQNKINEVKEITNLINLKYLNIGKNNISNVKPLWELTNL 253
Query: 260 QEFWINDNQVSDWNTVNVLENNKQL 284
E +IN+N++S+ T+ L N K+L
Sbjct: 254 IELYINENKISNIETLADLSNLKEL 278
>gi|225690572|ref|NP_001139519.1| leucine-rich repeat-containing protein 49 isoform 3 [Mus musculus]
Length = 746
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 105/170 (61%)
Query: 135 NKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLN 194
N I++I+N+ +L++L L+L DN+I I L L +L L LGKN+I +I NL +L L+
Sbjct: 182 NFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISNLENLKNLD 241
Query: 195 ILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIA 254
+L L N++ IEN+ L +L L L+ N L+ ++NL + L L++ +N+I+ ++++
Sbjct: 242 VLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQITFVRDVD 301
Query: 255 HLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKI 304
+L LQ +++ N ++ + +V+ L + L I D NP+AQ+ Y+ +
Sbjct: 302 NLPCLQRLFLSFNNITSFESVSCLAESTSLSDITFDGNPIAQESWYKHTV 351
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 175 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISNL 234
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 235 ENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 294
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + E++ L T L + +T N ++ E
Sbjct: 295 TFVRDVDNLPCLQRLFLSFNNITSFESVSCLAESTSL----SDITFDGNPIAQE------ 344
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 345 -SWYKHTVLQNMMQLRQL 361
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 174 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISN 233
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 234 LENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQ 293
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L L +L+LS N +T+ E+ + +A T L +
Sbjct: 294 ITFVRDVDNLPCLQRLFLSFNNITSFES-------------------VSCLAESTSLSDI 334
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 335 TFDGNPIAQESWYKHTVLQNMMQLRQLDMKR 365
>gi|26339966|dbj|BAC33646.1| unnamed protein product [Mus musculus]
Length = 752
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 105/170 (61%)
Query: 135 NKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLN 194
N I++I+N+ +L++L L+L DN+I I L L +L L LGKN+I +I NL +L L+
Sbjct: 188 NFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISNLENLKNLD 247
Query: 195 ILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIA 254
+L L N++ IEN+ L +L L L+ N L+ ++NL + L L++ +N+I+ ++++
Sbjct: 248 VLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQITFVRDVD 307
Query: 255 HLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKI 304
+L LQ +++ N ++ + +V+ L + L I D NP+AQ+ Y+ +
Sbjct: 308 NLPCLQRLFLSFNNITSFESVSCLAESTSLSDITFDGNPIAQESWYKHTV 357
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 181 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISNL 240
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 241 ENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 300
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + E++ L T L + +T N ++ E
Sbjct: 301 TFVRDVDNLPCLQRLFLSFNNITSFESVSCLAESTSL----SDITFDGNPIAQE------ 350
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 351 -SWYKHTVLQNMMQLRQL 367
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 180 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISN 239
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 240 LENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQ 299
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L L +L+LS N +T+ E+ + +A T L +
Sbjct: 300 ITFVRDVDNLPCLQRLFLSFNNITSFES-------------------VSCLAESTSLSDI 340
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 341 TFDGNPIAQESWYKHTVLQNMMQLRQLDMKR 371
>gi|225690564|ref|NP_663591.3| leucine-rich repeat-containing protein 49 isoform 2 [Mus musculus]
Length = 752
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 105/170 (61%)
Query: 135 NKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLN 194
N I++I+N+ +L++L L+L DN+I I L L +L L LGKN+I +I NL +L L+
Sbjct: 188 NFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISNLENLKNLD 247
Query: 195 ILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIA 254
+L L N++ IEN+ L +L L L+ N L+ ++NL + L L++ +N+I+ ++++
Sbjct: 248 VLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQITFVRDVD 307
Query: 255 HLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKI 304
+L LQ +++ N ++ + +V+ L + L I D NP+AQ+ Y+ +
Sbjct: 308 NLPCLQRLFLSFNNITSFESVSCLAESTSLSDITFDGNPIAQESWYKHTV 357
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 116/198 (58%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 181 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISNL 240
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L NL+ L L N+I+KIENV+HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 241 ENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 300
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + + E++ L T L + +T N ++ E
Sbjct: 301 TFVRDVDNLPCLQRLFLSFNNITSFESVSCLAESTSL----SDITFDGNPIAQE------ 350
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +++QN+ L +L
Sbjct: 351 -SWYKHTVLQNMMQLRQL 367
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 21/211 (9%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 180 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLKSLRVLLLGKNRIKKISN 239
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN++ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 240 LENLKNLDVLDLHGNQITKIENVNHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQ 299
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + +++ L L +L+LS N +T+ E+ + +A T L +
Sbjct: 300 ITFVRDVDNLPCLQRLFLSFNNITSFES-------------------VSCLAESTSLSDI 340
Query: 263 WINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
+ N ++ W VL+N QL+ + + R
Sbjct: 341 TFDGNPIAQESWYKHTVLQNMMQLRQLDMKR 371
>gi|422411730|ref|ZP_16488689.1| internalin A, partial [Listeria innocua FSL S4-378]
gi|313620695|gb|EFR91985.1| internalin A [Listeria innocua FSL S4-378]
Length = 434
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 111/192 (57%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L T+ L L ++ IE ++ L NL L LS N++ +I L L NL L L N IS
Sbjct: 70 LDTINSLTLTSKGISSIEGMNYLTNLGTLILSSNQVSDISPLKGLTNLTMLQLSGNPISD 129
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I + +LK L+ L++ D +I I L GLTNL+ L L N++ + + +L +L L++
Sbjct: 130 ISALSNLKNLQALDINDAQITDITPLSGLTNLKGLGLYNNQLENLSGVNNLQQLRSLNVS 189
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N+L ++ L+AL+NL LY + N + ++ L + + L LD++ N+I +A LT +
Sbjct: 190 NNKLTNLDELQALSNLGVLYANGNQINNLQGLSTLKNLFLLDLSTNQIMDTTPLAGLTNV 249
Query: 260 QEFWINDNQVSD 271
Q ++++NQ+SD
Sbjct: 250 QTLYLSNNQISD 261
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 114/199 (57%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+L N + I + LT L L+L N ++ I L L NL+ LD++ +I +I
Sbjct: 95 LGTLILSSNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQITDITP 154
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L +N++ + V++L++L+ L + +NK+ ++ L L+NL LY N+
Sbjct: 155 LSGLTNLKGLGLYNNQLENLSGVNNLQQLRSLNVSNNKLTNLDELQALSNLGVLYANGNQ 214
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + L++L L +L L N++ L LTN+ LYLS N ++ + L S L+ L
Sbjct: 215 INNLQGLSTLKNLFLLDLSTNQIMDTTPLAGLTNVQTLYLSNNQISDVTGLSSLINLDWL 274
Query: 241 DVAYNKISIIQNIAHLTEL 259
D++ NKIS I+ + LT+L
Sbjct: 275 DISQNKISNIRPLNSLTKL 293
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%)
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
I++I D L K LG + + L + L L IS I+ + LT L L
Sbjct: 39 INQIFPDDALAKEIQTALGKSSTAEVVTQTDLDTINSLTLTSKGISSIEGMNYLTNLGTL 98
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
L N++ I L+ LTNLT L LS N ++ I L + + L+ LD+ +I+ I ++ L
Sbjct: 99 ILSSNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQITDITPLSGL 158
Query: 257 TELQEFWINDNQVSDWNTVNVLENNKQL 284
T L+ + +NQ+ + + VN L+ + L
Sbjct: 159 TNLKGLGLYNNQLENLSGVNNLQQLRSL 186
>gi|429966248|gb|ELA48245.1| hypothetical protein VCUG_00286 [Vavraia culicis 'floridensis']
Length = 224
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 115/188 (61%), Gaps = 5/188 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I+ ++L N I I N+ L + L+L DNQ+T I+NL+ L NL +LDL +N + +I+
Sbjct: 25 IQCVILYHNKITSI-NMTYLPNVHSLDLSDNQITTIQNLENLPNLRVLDLGYNLLTQIEN 83
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L+ L L L+L N I KI+++ + LK L++ N I IENL NLEELYLG N+
Sbjct: 84 LELLP-LTDLFLMCNDIEKIDSL-RILSLKNLDMACNSIAKIENL-ACVNLEELYLGNNR 140
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENG-LTTIENLLSNEKLET 239
I ++N+ L++L+ LSLQCN+++T++ +L L L N L + NL +KLE
Sbjct: 141 IRTVENIGHLSQLHTLSLQCNQIQTVDCRRLPKSLRYLLLDGNQELEEVVNLEYLDKLEY 200
Query: 240 LDVAYNKI 247
LDV+ +I
Sbjct: 201 LDVSKTRI 208
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 104/186 (55%), Gaps = 9/186 (4%)
Query: 107 ILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLD 166
+L L ++ + +I + +++ + L NKI+ I N+ +L + L+L DN+I I+NL+
Sbjct: 7 VLSLPYSNLTQIPAVKE--DIQCVILYHNKITSI-NMTYLPNVHSLDLSDNQITTIQNLE 63
Query: 167 GLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
L NL L LG N +++I+NL L L L L CN + I++L L+ L L ++ N +
Sbjct: 64 NLPNLRVLDLGYNLLTQIENL-ELLPLTDLFLMCNDIEKIDSLRILS-LKNLDMACNSIA 121
Query: 227 TIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQT 286
IENL + LE L + N+I ++NI HL++L + NQ+ TV+ K L+
Sbjct: 122 KIENL-ACVNLEELYLGNNRIRTVENIGHLSQLHTLSLQCNQIQ---TVDCRRLPKSLRY 177
Query: 287 IYLDRN 292
+ LD N
Sbjct: 178 LLLDGN 183
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 4/159 (2%)
Query: 110 LSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLT 169
L N+I I + +L N+ L L N+I+ I+N+++L L+VL+LG N + IENL+ L
Sbjct: 30 LYHNKITSI-NMTYLPNVHSLDLSDNQITTIQNLENLPNLRVLDLGYNLLTQIENLE-LL 87
Query: 170 NLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
L +L+L N I +ID+L L+ N L + CN + IENL A NL +LYL N + T+E
Sbjct: 88 PLTDLFLMCNDIEKIDSLRILSLKN-LDMACNSIAKIENL-ACVNLEELYLGNNRIRTVE 145
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQ 268
N+ +L TL + N+I + L+ ++ NQ
Sbjct: 146 NIGHLSQLHTLSLQCNQIQTVDCRRLPKSLRYLLLDGNQ 184
>gi|16799449|ref|NP_469717.1| cell surface protein [Listeria innocua Clip11262]
gi|16412801|emb|CAC95605.1| probable cell surface protein (LPXTG motif) [Listeria innocua
Clip11262]
Length = 656
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 111/192 (57%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L T+ L L ++ IE ++ L NL L LS N++ +I L L NL L L N IS
Sbjct: 70 LDTINSLTLTSKGISSIEGMNYLTNLGTLILSSNQVSDISPLKGLTNLTMLQLSGNPISD 129
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I + +LK L+ L++ D +I I L GLTNL+ L L N++ + + +L +L L++
Sbjct: 130 ISALSNLKNLQALDINDAQITDITPLSGLTNLKGLGLYNNQLENLSGVNNLQQLRSLNVS 189
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N+L ++ L+AL+NL LY + N + ++ L + + L LD++ N+I +A LT +
Sbjct: 190 NNKLTNLDELQALSNLGVLYANGNQINNLQGLSTLKNLFLLDLSTNQIVDTTPLAGLTNV 249
Query: 260 QEFWINDNQVSD 271
Q ++++NQ+SD
Sbjct: 250 QTLYLSNNQISD 261
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 114/199 (57%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+L N + I + LT L L+L N ++ I L L NL+ LD++ +I +I
Sbjct: 95 LGTLILSSNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQITDITP 154
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L +N++ + V++L++L+ L + +NK+ ++ L L+NL LY N+
Sbjct: 155 LSGLTNLKGLGLYNNQLENLSGVNNLQQLRSLNVSNNKLTNLDELQALSNLGVLYANGNQ 214
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + L++L L +L L N++ L LTN+ LYLS N ++ + L S L+ L
Sbjct: 215 INNLQGLSTLKNLFLLDLSTNQIVDTTPLAGLTNVQTLYLSNNQISDVTGLSSLINLDWL 274
Query: 241 DVAYNKISIIQNIAHLTEL 259
D++ NKIS I+ + LT+L
Sbjct: 275 DISQNKISNIRPLNSLTKL 293
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%)
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
I++I D L K LG + + L + L L IS I+ + LT L L
Sbjct: 39 INQIFPDDALAKEIQTALGKSSTAEVVTQTDLDTINSLTLTSKGISSIEGMNYLTNLGTL 98
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
L N++ I L+ LTNLT L LS N ++ I L + + L+ LD+ +I+ I ++ L
Sbjct: 99 ILSSNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQITDITPLSGL 158
Query: 257 TELQEFWINDNQVSDWNTVNVLENNKQL 284
T L+ + +NQ+ + + VN L+ + L
Sbjct: 159 TNLKGLGLYNNQLENLSGVNNLQQLRSL 186
>gi|405754510|ref|YP_006677974.1| internalin F [Listeria monocytogenes SLCC2540]
gi|404223710|emb|CBY75072.1| internalin F (LPXTG motif) [Listeria monocytogenes SLCC2540]
Length = 823
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 128/256 (50%), Gaps = 26/256 (10%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L++ + I+ I LT L+ L L NQ+T I L L+ L L + N+I +I
Sbjct: 78 SITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDIS 137
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK----IRIIENLDGL------- 168
L +L NL +LYL + IS I + +L K+ L LG N + + N+ GL
Sbjct: 138 ALQNLTNLRELYLNEDNISDISPLANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTE 197
Query: 169 ---------TNLEELY---LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
NL +LY L N+I I LASLT L+ + N++ I + +T L
Sbjct: 198 SKAKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLN 257
Query: 217 QLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN 276
L + N +T + L + +L L++ N+IS I + LT+L+ + NQ+SD ++
Sbjct: 258 SLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISD---IS 314
Query: 277 VLENNKQLQTIYLDRN 292
VL N QL +++L+ N
Sbjct: 315 VLNNLSQLNSLFLNNN 330
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
Query: 72 KKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLY 131
K + I LT L L L NQ+ I L +L +L N+I +I + ++ L L
Sbjct: 201 KDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSLK 260
Query: 132 LCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLT 191
+ +NKI+ + + +L +L LE+G N+I I + LT L+ L +G N+IS I L +L+
Sbjct: 261 IGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDISVLNNLS 320
Query: 192 KLNILSLQCNRLRT--IENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
+LN L L N+L +E + LTNLT L+LS+N +T I L S K+++ D A
Sbjct: 321 QLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFA 374
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 187 LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK 246
L S+TKL + ++ +I+ +E LTNL L L+ N +T I L + KL L + NK
Sbjct: 76 LESITKLVV---AGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNK 132
Query: 247 ISIIQNIAHLTELQEFWINDNQVSD 271
I+ I + +LT L+E ++N++ +SD
Sbjct: 133 ITDISALQNLTNLRELYLNEDNISD 157
>gi|423666347|ref|ZP_17641376.1| hypothetical protein IKO_00044, partial [Bacillus cereus VDM034]
gi|401305703|gb|EJS11236.1| hypothetical protein IKO_00044, partial [Bacillus cereus VDM034]
Length = 855
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 134/240 (55%), Gaps = 7/240 (2%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ LDLS N I I+ + L NL+ L
Sbjct: 231 INEIAGLEYMTNLEKLTLRESNVTDISVISGLRHLKYLDLSSNPIESIQPVSKLENLDML 290
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKI+ + + +KK+K+L+L N I+ + L + +LEE+YL N+IS + + L
Sbjct: 291 FLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSGIEKL 350
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+N+L + N++ E + ++NL +L ++++ + I +L K++ L++ N IS I
Sbjct: 351 KNVNLLWIGNNKISDAEPISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENYISDI 410
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNK----QLQTIYLDRNPVAQD---PNYRRK 303
+++LT L E + N++SD +V L Q Q I+LD V ++ P Y K
Sbjct: 411 SPLSNLTNLHEINLGANEISDIKSVEELGKRTSIDIQRQKIFLDEASVDEEIKIPVYNFK 470
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 106/182 (58%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I+ I+ + L L L L DN++ + L + ++ILDL N I+++ L +
Sbjct: 270 LSSNPIESIQPVSKLENLDMLFLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVL 329
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+LE++YL +N+IS + ++ LK + +L +G+NKI E + ++NL EL + ++I I
Sbjct: 330 SLEEVYLANNQISNLSGIEKLKNVNLLWIGNNKISDAEPISKMSNLIELEIADSEIKDIS 389
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
+L+ L K+ +L+L+ N + I L LTNL ++ L N ++ I+++ K ++D+
Sbjct: 390 SLSKLVKIQVLNLEENYISDISPLSNLTNLHEINLGANEISDIKSVEELGKRTSIDIQRQ 449
Query: 246 KI 247
KI
Sbjct: 450 KI 451
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 91/158 (57%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N I + + + +K L+L N + + L T+++LE + L+ N+I + G
Sbjct: 287 LDMLFLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSG 346
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
++ L N+ L++ +NKIS E + + L LE+ D++I+ I +L L ++ L L +N
Sbjct: 347 IEKLKNVNLLWIGNNKISDAEPISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENY 406
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
IS I L++LT L+ ++L N + I+++E L T +
Sbjct: 407 ISDISPLSNLTNLHEINLGANEISDIKSVEELGKRTSI 444
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+LK + +
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDLTGLEYMTNLENLTLEGVGLKNIEFISNLKQLKDVNVSH 620
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
NKI I L L NL+ L L N I + L S+ L L L N +R + L
Sbjct: 621 NKIEDITPLSSLENLQWLNLADNHIKDVSVLGSMLDLLSLKLAGNEIRDVRPL 673
>gi|423664526|ref|ZP_17639691.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VDM022]
gi|401292549|gb|EJR98204.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VDM022]
Length = 961
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 135/240 (56%), Gaps = 7/240 (2%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ LDLS + I I+ + L NL+ L
Sbjct: 231 INEIAGLEYMTNLEKLTLRESNVTDISVISGLRHLKYLDLSSSPIESIQPVSKLENLDML 290
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKI+ + + +KK+K+L+L N I+ + L + +LEE+YL N+IS + + L
Sbjct: 291 FLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSGIEKL 350
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+N+L + N++ IE + ++NL +L ++++ + I +L K++ L++ N IS I
Sbjct: 351 KNVNLLWIGNNKISDIEPISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENYISDI 410
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNK----QLQTIYLDRNPVAQD---PNYRRK 303
+++LT L E + N++SD +V L Q Q I+LD V ++ P Y K
Sbjct: 411 SPLSNLTNLHEINLGANEISDIKSVEELGKRTSIDIQRQKIFLDEASVDEEIKIPVYNFK 470
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 92/158 (58%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N I + + + +K L+L N + + L T+++LE + L+ N+I + G
Sbjct: 287 LDMLFLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSG 346
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
++ L N+ L++ +NKIS IE + + L LE+ D++I+ I +L L ++ L L +N
Sbjct: 347 IEKLKNVNLLWIGNNKISDIEPISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENY 406
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
IS I L++LT L+ ++L N + I+++E L T +
Sbjct: 407 ISDISPLSNLTNLHEINLGANEISDIKSVEELGKRTSI 444
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 84/143 (58%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I+ L L N IK + + + +L+E+ L +NQ++ + ++ L N+ +L + N+I +I+
Sbjct: 309 IKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSGIEKLKNVNLLWIGNNKISDIEP 368
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ ++NL +L + ++I I ++ L K++VL L +N I I L LTNL E+ LG N+
Sbjct: 369 ISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENYISDISPLSNLTNLHEINLGANE 428
Query: 181 ISRIDNLASLTKLNILSLQCNRL 203
IS I ++ L K + +Q ++
Sbjct: 429 ISDIKSVEELGKRTSIDIQRQKI 451
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+LK + +
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDLTGLEYMTNLENLTLEGVGLKNIEFISNLKQLKDVNVSH 620
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
NKI I L L NL+ L L N I + L S+ L L L N +R + L
Sbjct: 621 NKIEDITPLSSLENLQWLNLADNHIKDVSVLGSMLDLLSLKLAGNEIRDVRPL 673
>gi|330506767|ref|YP_004383195.1| internalin-A [Methanosaeta concilii GP6]
gi|328927575|gb|AEB67377.1| internalin-A, putative [Methanosaeta concilii GP6]
Length = 567
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 127/224 (56%), Gaps = 3/224 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ LLL N I + ++ LT L +L+L NQ+T L L NL LDL N+I ++
Sbjct: 146 LDTLLLWGNKIINVSSLSGLTNLTDLDLSTNQITDASPLSGLTNLTDLDLDNNQITDVSS 205
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL L L SN+I+ + + L + L+L N+I + L GLTNL L + +N+
Sbjct: 206 LSGLINLMNLDLSSNRITNVS-LSGLTNVVWLDLWGNQITDVT-LSGLTNLTWLDVSRNQ 263
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + +L+ LT L L L CN++ + +L LTNLT L LS N +T L L L
Sbjct: 264 IADVSSLSGLTNLTKLYLGCNQITDVSSLSGLTNLTDLDLSTNQITDASPLSGLTNLTYL 323
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQL 284
D+ N+I+ + ++ LT L + +++NQ++D ++++ L N K L
Sbjct: 324 DLDNNRINDVS-LSDLTNLTDLELSNNQINDVSSLSGLTNLKDL 366
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 124/234 (52%), Gaps = 6/234 (2%)
Query: 49 SKAEDEESKEVCI--ERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLE 106
S +D E CI E L LR N I ++ LT LK LEL NQ+T + L L NLE
Sbjct: 68 SSIKDITGLERCINLENLSLRENEISDASSLSGLTGLKRLELSSNQITDVS-LSGLANLE 126
Query: 107 ILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLD 166
L L N I + L L NL+ L L NKI + ++ L L L+L N+I L
Sbjct: 127 TLSLWDNHITNVS-LSGLTNLDTLLLWGNKIINVSSLSGLTNLTDLDLSTNQITDASPLS 185
Query: 167 GLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
GLTNL +L L N+I+ + +L+ L L L L NR+ + L LTN+ L L N +T
Sbjct: 186 GLTNLTDLDLDNNQITDVSSLSGLINLMNLDLSSNRITNVS-LSGLTNVVWLDLWGNQIT 244
Query: 227 TIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+ L L LDV+ N+I+ + +++ LT L + ++ NQ++D ++++ L N
Sbjct: 245 DVT-LSGLTNLTWLDVSRNQIADVSSLSGLTNLTKLYLGCNQITDVSSLSGLTN 297
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 1/220 (0%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ +L L N I + ++ LT L +L+L NQ+T L L NL LDL NRI ++
Sbjct: 276 LTKLYLGCNQITDVSSLSGLTNLTDLDLSTNQITDASPLSGLTNLTYLDLDNNRINDVS- 334
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL L L +N+I+ + ++ L LK L+L +N+I I +L GLTNL +L L N+
Sbjct: 335 LSDLTNLTDLELSNNQINDVSSLSGLTNLKDLDLSNNQINDISSLSGLTNLTDLELSSNE 394
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ I +L+SL L L L N++ + +L ALT+L L L N T +L S L L
Sbjct: 395 ITNISSLSSLASLRCLDLDNNQIIDVSSLSALTSLKWLRLCSNHATDASSLSSLVNLRWL 454
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
D++ N+I+ + ++ L L ++ NQ++D + ++ L N
Sbjct: 455 DLSSNQITDVSPLSGLYNLGWLNLSSNQITDVSPLSGLAN 494
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 111/198 (56%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
LT L +LEL +NQ+ + +L L NL+ LDLS N+I +I L L NL L L SN+I+
Sbjct: 338 LTNLTDLELSNNQINDVSSLSGLTNLKDLDLSNNQINDISSLSGLTNLTDLELSSNEITN 397
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I ++ L L+ L+L +N+I + +L LT+L+ L L N + +L+SL L L L
Sbjct: 398 ISSLSSLASLRCLDLDNNQIIDVSSLSALTSLKWLRLCSNHATDASSLSSLVNLRWLDLS 457
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N++ + L L NL L LS N +T + L L LD++ N+I+ + +++LT L
Sbjct: 458 SNQITDVSPLSGLYNLGWLNLSSNQITDVSPLSGLANLTGLDLSSNQITDVSPLSNLTNL 517
Query: 260 QEFWINDNQVSDWNTVNV 277
+ Q+ D +T+ +
Sbjct: 518 IWMDLRSKQIPDASTLRI 535
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 124/215 (57%), Gaps = 4/215 (1%)
Query: 73 KIENIHM--LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
+I N+ + LT + L+L+ NQ+T + L L NL LD+S N+I ++ L L NL KL
Sbjct: 221 RITNVSLSGLTNVVWLDLWGNQITDVT-LSGLTNLTWLDVSRNQIADVSSLSGLTNLTKL 279
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
YL N+I+ + ++ L L L+L N+I L GLTNL L L N+I+ + +L+ L
Sbjct: 280 YLGCNQITDVSSLSGLTNLTDLDLSTNQITDASPLSGLTNLTYLDLDNNRINDV-SLSDL 338
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T L L L N++ + +L LTNL L LS N + I +L L L+++ N+I+ I
Sbjct: 339 TNLTDLELSNNQINDVSSLSGLTNLKDLDLSNNQINDISSLSGLTNLTDLELSSNEITNI 398
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQ 285
+++ L L+ +++NQ+ D ++++ L + K L+
Sbjct: 399 SSLSSLASLRCLDLDNNQIIDVSSLSALTSLKWLR 433
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 2/169 (1%)
Query: 102 LINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRI 161
L +++L+ + I++I GL+ NLE L L N+IS ++ L LK LEL N+I
Sbjct: 57 LYGIKLLNADMSSIKDITGLERCINLENLSLRENEISDASSLSGLTGLKRLELSSNQITD 116
Query: 162 IENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLS 221
+ L GL NLE L L N I+ + +L+ LT L+ L L N++ + +L LTNLT L LS
Sbjct: 117 VS-LSGLANLETLSLWDNHITNV-SLSGLTNLDTLLLWGNKIINVSSLSGLTNLTDLDLS 174
Query: 222 ENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
N +T L L LD+ N+I+ + +++ L L ++ N+++
Sbjct: 175 TNQITDASPLSGLTNLTDLDLDNNQITDVSSLSGLINLMNLDLSSNRIT 223
>gi|423677606|ref|ZP_17652541.1| hypothetical protein IKS_05142, partial [Bacillus cereus VDM062]
gi|401306296|gb|EJS11797.1| hypothetical protein IKS_05142, partial [Bacillus cereus VDM062]
Length = 846
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 134/240 (55%), Gaps = 7/240 (2%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ LDLS N I I+ + L NL+ L
Sbjct: 231 INEIAGLEYMTNLEKLTLRESNVTDISVISGLRHLKYLDLSSNPIESIQPVSKLENLDML 290
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKI+ + + +KK+K+L+L N I+ + L + +LEE+YL N+IS + + L
Sbjct: 291 FLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSGIEKL 350
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+N+L + N++ E + ++NL +L ++++ + I +L K++ L++ N IS I
Sbjct: 351 KNVNLLWIGNNKISDAEPISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENYISDI 410
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNK----QLQTIYLDRNPVAQD---PNYRRK 303
+++LT L E + N++SD +V L Q Q I+LD V ++ P Y K
Sbjct: 411 SPLSNLTNLHEINLGANEISDIKSVEELGKRTSIDIQRQKIFLDEASVDEEIKIPVYNFK 470
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 106/182 (58%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I+ I+ + L L L L DN++ + L + ++ILDL N I+++ L +
Sbjct: 270 LSSNPIESIQPVSKLENLDMLFLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVL 329
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+LE++YL +N+IS + ++ LK + +L +G+NKI E + ++NL EL + ++I I
Sbjct: 330 SLEEVYLANNQISNLSGIEKLKNVNLLWIGNNKISDAEPISKMSNLIELEIADSEIKDIS 389
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
+L+ L K+ +L+L+ N + I L LTNL ++ L N ++ I+++ K ++D+
Sbjct: 390 SLSKLVKIQVLNLEENYISDISPLSNLTNLHEINLGANEISDIKSVEELGKRTSIDIQRQ 449
Query: 246 KI 247
KI
Sbjct: 450 KI 451
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 91/158 (57%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N I + + + +K L+L N + + L T+++LE + L+ N+I + G
Sbjct: 287 LDMLFLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSG 346
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
++ L N+ L++ +NKIS E + + L LE+ D++I+ I +L L ++ L L +N
Sbjct: 347 IEKLKNVNLLWIGNNKISDAEPISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENY 406
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
IS I L++LT L+ ++L N + I+++E L T +
Sbjct: 407 ISDISPLSNLTNLHEINLGANEISDIKSVEELGKRTSI 444
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+LK + +
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDLTGLEYMTNLENLTLEGVGLKNIEFISNLKQLKDVNVSH 620
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
NKI I L L NL+ L L N I + L S+ L L L N +R + L
Sbjct: 621 NKIEDITPLSSLENLQWLNLADNHIKDVSVLGSMLDLLSLKLAGNEIRDVRPL 673
>gi|422414802|ref|ZP_16491759.1| internalin A, partial [Listeria innocua FSL J1-023]
gi|313625220|gb|EFR95067.1| internalin A [Listeria innocua FSL J1-023]
Length = 435
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 118/209 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+L N + I + LT L L+L +N ++ I L L NL+ LD++ +I +I
Sbjct: 95 LGTLILSGNQVSDISPLKGLTNLTMLQLSENPISDISALSNLKNLQALDINNAQITDITP 154
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L +N++ + V++L++L+ L + +NK+ +++L L+NL LY N+
Sbjct: 155 LSGLTNLKGLGLYNNQLENLSGVNNLQQLRSLNVSNNKLTNLDDLQALSNLGVLYANGNQ 214
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I + +++L L +L L N++ L LTN+ LY+S N ++ + L S L+ L
Sbjct: 215 IGNLQGISALKNLFLLDLSANQIVDTTPLAGLTNIQTLYVSNNQISDVTGLSSLINLDWL 274
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQV 269
D++ NKIS I+ + LT+L + D +
Sbjct: 275 DISQNKISNIRPLNSLTKLTIIQMTDQSI 303
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 112/192 (58%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L T+ L L ++ IE ++ L NL L LS N++ +I L L NL L L N IS
Sbjct: 70 LDTINSLTLTSKGISSIEGMNYLNNLGTLILSGNQVSDISPLKGLTNLTMLQLSENPISD 129
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I + +LK L+ L++ + +I I L GLTNL+ L L N++ + + +L +L L++
Sbjct: 130 ISALSNLKNLQALDINNAQITDITPLSGLTNLKGLGLYNNQLENLSGVNNLQQLRSLNVS 189
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N+L +++L+AL+NL LY + N + ++ + + + L LD++ N+I +A LT +
Sbjct: 190 NNKLTNLDDLQALSNLGVLYANGNQIGNLQGISALKNLFLLDLSANQIVDTTPLAGLTNI 249
Query: 260 QEFWINDNQVSD 271
Q ++++NQ+SD
Sbjct: 250 QTLYVSNNQISD 261
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 129/250 (51%), Gaps = 12/250 (4%)
Query: 38 PDEE--SEAETTESKAEDEE----SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDN 91
PD+ E +TT K+ E + I L L I IE ++ L L L L N
Sbjct: 44 PDDALAKEIQTTLGKSSTAEVVTQTDLDTINSLTLTSKGISSIEGMNYLNNLGTLILSGN 103
Query: 92 QLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKV 151
Q++ I L L NL +L LS N I +I L +L NL+ L + + +I+ I + L LK
Sbjct: 104 QVSDISPLKGLTNLTMLQLSENPISDISALSNLKNLQALDINNAQITDITPLSGLTNLKG 163
Query: 152 LELGDNKIRIIENLDGLTNLEELY---LGKNKISRIDNLASLTKLNILSLQCNRLRTIEN 208
L L +N++ ENL G+ NL++L + NK++ +D+L +L+ L +L N++ ++
Sbjct: 164 LGLYNNQL---ENLSGVNNLQQLRSLNVSNNKLTNLDDLQALSNLGVLYANGNQIGNLQG 220
Query: 209 LEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQ 268
+ AL NL L LS N + L ++TL V+ N+IS + ++ L L I+ N+
Sbjct: 221 ISALKNLFLLDLSANQIVDTTPLAGLTNIQTLYVSNNQISDVTGLSSLINLDWLDISQNK 280
Query: 269 VSDWNTVNVL 278
+S+ +N L
Sbjct: 281 ISNIRPLNSL 290
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
L + L L IS I+ + L L L L N++ I L+ LTNLT L LSEN ++
Sbjct: 70 LDTINSLTLTSKGISSIEGMNYLNNLGTLILSGNQVSDISPLKGLTNLTMLQLSENPISD 129
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
I L + + L+ LD+ +I+ I ++ LT L+ + +NQ+ + + VN L+ QL+++
Sbjct: 130 ISALSNLKNLQALDINNAQITDITPLSGLTNLKGLGLYNNQLENLSGVNNLQ---QLRSL 186
Query: 288 YLDRN 292
+ N
Sbjct: 187 NVSNN 191
>gi|405960447|gb|EKC26372.1| Leucine-rich repeat-containing protein 49 [Crassostrea gigas]
Length = 742
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 103/168 (61%)
Query: 135 NKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLN 194
N ISKI+++ LK+L L+L DN+I I L L +L L LGKN+I +I+NL +++KL+
Sbjct: 149 NMISKIQHLSSLKRLIFLDLYDNQIEEISGLSSLKSLRVLMLGKNRIKKIENLDTMSKLD 208
Query: 195 ILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIA 254
+L L N++ IENL L L L L+ N +T ++NL + L L++ N+I ++ ++
Sbjct: 209 VLDLHGNQISLIENLNHLAELRVLNLAGNQITNVDNLAGMDSLAELNLRRNRIRMVLDVD 268
Query: 255 HLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRR 302
+L LQ +++ N++ + + L ++ L I LD NP+ Q+ Y++
Sbjct: 269 NLPSLQRLFLSFNEICSFEDITSLSDSTSLSEISLDGNPITQEQYYKQ 316
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 94/149 (63%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N ++ I++L +L L LDL N+I EI GL L +L L L N+I KIEN
Sbjct: 141 LRLLNYQHNMISKIQHLSSLKRLIFLDLYDNQIEEISGLSSLKSLRVLMLGKNRIKKIEN 200
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + KL VL+L N+I +IENL+ L L L L N+I+ +DNLA + L L+L+ NR
Sbjct: 201 LDTMSKLDVLDLHGNQISLIENLNHLAELRVLNLAGNQITNVDNLAGMDSLAELNLRRNR 260
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENL 231
+R + +++ L +L +L+LS N + + E++
Sbjct: 261 IRMVLDVDNLPSLQRLFLSFNEICSFEDI 289
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 85/128 (66%), Gaps = 3/128 (2%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N+I KI+++ L L L+LYDNQ+ I L +L +L +L L NRI++I+ LD ++ L+
Sbjct: 149 NMISKIQHLSSLKRLIFLDLYDNQIEEISGLSSLKSLRVLMLGKNRIKKIENLDTMSKLD 208
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR---ID 185
L L N+IS IEN++HL +L+VL L N+I ++NL G+ +L EL L +N+I +D
Sbjct: 209 VLDLHGNQISLIENLNHLAELRVLNLAGNQITNVDNLAGMDSLAELNLRRNRIRMVLDVD 268
Query: 186 NLASLTKL 193
NL SL +L
Sbjct: 269 NLPSLQRL 276
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 74/118 (62%), Gaps = 3/118 (2%)
Query: 73 KIENIHMLTTLKELE---LYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEK 129
+IE I L++LK L L N++ IENLDT+ L++LDL N+I I+ L+HLA L
Sbjct: 172 QIEEISGLSSLKSLRVLMLGKNRIKKIENLDTMSKLDVLDLHGNQISLIENLNHLAELRV 231
Query: 130 LYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNL 187
L L N+I+ ++N+ + L L L N+IR++ ++D L +L+ L+L N+I +++
Sbjct: 232 LNLAGNQITNVDNLAGMDSLAELNLRRNRIRMVLDVDNLPSLQRLFLSFNEICSFEDI 289
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 38/129 (29%)
Query: 15 DNLVTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIERLLLRWNLIKKI 74
+NL T++ V + HGNQ+SL I
Sbjct: 199 ENLDTMSKLDVLDLHGNQISL--------------------------------------I 220
Query: 75 ENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCS 134
EN++ L L+ L L NQ+T ++NL + +L L+L NRIR + +D+L +L++L+L
Sbjct: 221 ENLNHLAELRVLNLAGNQITNVDNLAGMDSLAELNLRRNRIRMVLDVDNLPSLQRLFLSF 280
Query: 135 NKISKIENV 143
N+I E++
Sbjct: 281 NEICSFEDI 289
>gi|423601991|ref|ZP_17577991.1| hypothetical protein III_04793, partial [Bacillus cereus VD078]
gi|401227948|gb|EJR34475.1| hypothetical protein III_04793, partial [Bacillus cereus VD078]
Length = 806
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 135/240 (56%), Gaps = 7/240 (2%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ LDLS + I I+ + L NL+ L
Sbjct: 231 INEIAGLEYMTNLEKLTLRESNVTDISVISGLRHLKYLDLSSSPIESIQPVSKLENLDML 290
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKI+ + + +KK+K+L+L N I+ + L + +LEE+YL N+IS + + L
Sbjct: 291 FLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSGIEKL 350
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+N+L + N++ +E + ++NL +L ++++ + I +L K++ L++ N IS I
Sbjct: 351 KNVNLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENYISDI 410
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNK----QLQTIYLDRNPVAQD---PNYRRK 303
+++LT L E + N++SD +V L Q Q I+LD V ++ P Y K
Sbjct: 411 SPLSNLTNLHEINLGANEISDIKSVEELGKRTSIDIQRQKIFLDEASVDEEIKIPVYNFK 470
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 92/158 (58%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N I + + + +K L+L N + + L T+++LE + L+ N+I + G
Sbjct: 287 LDMLFLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSG 346
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
++ L N+ L++ +NKIS +E + + L LE+ D++I+ I +L L ++ L L +N
Sbjct: 347 IEKLKNVNLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENY 406
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
IS I L++LT L+ ++L N + I+++E L T +
Sbjct: 407 ISDISPLSNLTNLHEINLGANEISDIKSVEELGKRTSI 444
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 84/143 (58%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I+ L L N IK + + + +L+E+ L +NQ++ + ++ L N+ +L + N+I +++
Sbjct: 309 IKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSGIEKLKNVNLLWIGNNKISDVEP 368
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ ++NL +L + ++I I ++ L K++VL L +N I I L LTNL E+ LG N+
Sbjct: 369 ISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENYISDISPLSNLTNLHEINLGANE 428
Query: 181 ISRIDNLASLTKLNILSLQCNRL 203
IS I ++ L K + +Q ++
Sbjct: 429 ISDIKSVEELGKRTSIDIQRQKI 451
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%)
Query: 117 EIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYL 176
++ GL+++ NLE L L + IE + +LK+LK + + NKI I L L NL+ L L
Sbjct: 583 DLTGLEYMTNLENLTLEGVGLKNIEFISNLKQLKDVNVSHNKIEDITPLSSLENLQWLNL 642
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
N I + L S+ L L L N +R + L
Sbjct: 643 ADNHIKDVSVLGSMLDLLSLKLAGNEIRDVRPL 675
>gi|154501010|ref|ZP_02039048.1| hypothetical protein BACCAP_04697 [Bacteroides capillosus ATCC
29799]
gi|150270034|gb|EDM97553.1| leucine Rich Repeat protein [Pseudoflavonifractor capillosus ATCC
29799]
Length = 312
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 120/221 (54%), Gaps = 3/221 (1%)
Query: 72 KKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLY 131
K + + L L +LELY + ++ + L L L LDLS NRI ++K L +L L+KL
Sbjct: 30 KDLTPLAALKHLNKLELYWSSISDLTPLAELKQLTTLDLSRNRIIDLKPLSNLTQLKKLI 89
Query: 132 LCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLT 191
L N++ + +D+L +LKVL L +N+ + L GLT L L L N I+ + L +LT
Sbjct: 90 LNQNQVIDLRPLDNLTQLKVLCLAENQCVDLSPLKGLTLLSILDLSHNPITDLSPLMALT 149
Query: 192 KLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQ 251
++ L L R+ + L + L LYLSE + + L+ +LE LD+ N+IS +
Sbjct: 150 RIMELRLSGIRMTDLSFLANMKQLRGLYLSECQIVALPPLVDLTRLERLDLCNNRISDLT 209
Query: 252 NIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
+A L+ L +N NQ++D ++ L QL ++L+ N
Sbjct: 210 PLAGLSRLAALSLNHNQITD---LSPLAYAPQLCELFLEHN 247
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+++L+L N + + + LT LK L L +NQ + L L L ILDLS N I ++
Sbjct: 85 LKKLILNQNQVIDLRPLDNLTQLKVLCLAENQCVDLSPLKGLTLLSILDLSHNPITDLSP 144
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L + +L L +++ + + ++K+L+ L L + +I + L LT LE L L N+
Sbjct: 145 LMALTRIMELRLSGIRMTDLSFLANMKQLRGLYLSECQIVALPPLVDLTRLERLDLCNNR 204
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + LA L++L LSL N++ + L L +L+L N +T + L L L
Sbjct: 205 ISDLTPLAGLSRLAALSLNHNQITDLSPLAYAPQLCELFLEHNTITDLTPLTKLNWLSRL 264
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQV 269
+ N I+ + + + L+E I +
Sbjct: 265 YLEGNPITDLTPLIDMPMLRELNIRGCPI 293
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I ++ + LT LK+L L NQ+ + LD L L++L L+ N+ ++ L L
Sbjct: 68 LSRNRIIDLKPLSNLTQLKKLILNQNQVIDLRPLDNLTQLKVLCLAENQCVDLSPLKGLT 127
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
L L L N I+ + + L ++ L L ++ + L + L LYL + +I +
Sbjct: 128 LLSILDLSHNPITDLSPLMALTRIMELRLSGIRMTDLSFLANMKQLRGLYLSECQIVALP 187
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L LT+L L L NR+ + L L+ L L L+ N +T + L +L L + +N
Sbjct: 188 PLVDLTRLERLDLCNNRISDLTPLAGLSRLAALSLNHNQITDLSPLAYAPQLCELFLEHN 247
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTV 275
I+ + + L L ++ N ++D +
Sbjct: 248 TITDLTPLTKLNWLSRLYLEGNPITDLTPL 277
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 31/163 (19%)
Query: 152 LELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEA 211
L +G + + L L +L +L L + IS + LA L +L L L NR I +L+
Sbjct: 22 LPMGLQITKDLTPLAALKHLNKLELYWSSISDLTPLAELKQLTTLDLSRNR---IIDLKP 78
Query: 212 LTNLTQ-------------------------LYLSENGLTTIENLLSNEKLETLDVAYNK 246
L+NLTQ L L+EN + L L LD+++N
Sbjct: 79 LSNLTQLKKLILNQNQVIDLRPLDNLTQLKVLCLAENQCVDLSPLKGLTLLSILDLSHNP 138
Query: 247 ISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL 289
I+ + + LT + E ++ +++D ++ L N KQL+ +YL
Sbjct: 139 ITDLSPLMALTRIMELRLSGIRMTD---LSFLANMKQLRGLYL 178
>gi|411120224|ref|ZP_11392600.1| leucine rich repeat protein [Oscillatoriales cyanobacterium JSC-12]
gi|410710380|gb|EKQ67891.1| leucine rich repeat protein [Oscillatoriales cyanobacterium JSC-12]
Length = 376
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 139/289 (48%), Gaps = 22/289 (7%)
Query: 18 VTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIERLLLRWNLIKKIENI 77
V L V N Q+++ + +S E + E + +E LL +
Sbjct: 22 VGLGVVGTGNDASAQLAMSDETPQSFVEWCAQRQTLEPEPKQTVELLLAIAGTTNCEQAE 81
Query: 78 HMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL---------------- 121
TT L L ++ L + L NLE+L LS NRIR+I+ L
Sbjct: 82 AAFTTTTSLVLSNSNLADLRPLAGFKNLEVLLLSNNRIRDIRPLQNLTNLKLLTLDTNQV 141
Query: 122 ------DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
L NL+ L L +N+I ++ + L KL L L N+I + L L NL+ L
Sbjct: 142 ADIAPLSPLTNLQVLALDTNQIENLKPLQPLTKLTNLLLYSNQISDLSPLASLKNLQALS 201
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
L +N+IS + LASL KL +LSL N++ + L +LTNL L L EN +T + L S
Sbjct: 202 LYQNQISDLSPLASLKKLQVLSLYSNKISDLSPLASLTNLKTLALFENQITDLTPLASLI 261
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQL 284
+LETL + N+I+ + ++ L+ L E I +N ++D ++ L+N ++L
Sbjct: 262 QLETLTLFENQITDLTPLSQLSNLNELIIGNNPIADLKPLSRLKNLQKL 310
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 110/211 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E LLL N I+ I + LT LK L L NQ+ I L L NL++L L N+I +K
Sbjct: 109 LEVLLLSNNRIRDIRPLQNLTNLKLLTLDTNQVADIAPLSPLTNLQVLALDTNQIENLKP 168
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L L L SN+IS + + LK L+ L L N+I + L L L+ L L NK
Sbjct: 169 LQPLTKLTNLLLYSNQISDLSPLASLKNLQALSLYQNQISDLSPLASLKKLQVLSLYSNK 228
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + LASLT L L+L N++ + L +L L L L EN +T + L L L
Sbjct: 229 ISDLSPLASLTNLKTLALFENQITDLTPLASLIQLETLTLFENQITDLTPLSQLSNLNEL 288
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+ N I+ ++ ++ L LQ+ + + V+D
Sbjct: 289 IIGNNPIADLKPLSRLKNLQKLALFNTNVTD 319
>gi|423421353|ref|ZP_17398442.1| hypothetical protein IE3_04825, partial [Bacillus cereus BAG3X2-1]
gi|401099275|gb|EJQ07284.1| hypothetical protein IE3_04825, partial [Bacillus cereus BAG3X2-1]
Length = 803
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 134/240 (55%), Gaps = 7/240 (2%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ LDLS N I I+ + L NL+ L
Sbjct: 233 INEIAGLEYMTNLEKLTLRESNVTDISVISGLRHLKYLDLSSNPIESIQPVSKLENLDML 292
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKI+ + + +KK+K+L+L N I+ + L + +LEE+YL N+IS + + L
Sbjct: 293 FLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSGIEKL 352
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ +L + N++ +E + ++NL +L ++++ + I +L K++ L++ N IS I
Sbjct: 353 KNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENYISDI 412
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNK----QLQTIYLDRNPVAQD---PNYRRK 303
+++LT L E + N++SD +V L Q Q I+LD V ++ P Y K
Sbjct: 413 SPLSNLTNLHEINLGANEISDIKSVEELGKRTSIDIQRQKIFLDEASVDEEIKIPVYNFK 472
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 108/182 (59%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I+ I+ + L L L L DN++ + L + ++ILDL N I+++ L +
Sbjct: 272 LSSNPIESIQPVSKLENLDMLFLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVL 331
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+LE++YL +N+IS + ++ LK +K+L +G+NKI +E + ++NL EL + ++I I
Sbjct: 332 SLEEVYLANNQISNLSGIEKLKNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDIS 391
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
+L+ L K+ +L+L+ N + I L LTNL ++ L N ++ I+++ K ++D+
Sbjct: 392 SLSKLVKIQVLNLEENYISDISPLSNLTNLHEINLGANEISDIKSVEELGKRTSIDIQRQ 451
Query: 246 KI 247
KI
Sbjct: 452 KI 453
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 93/158 (58%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N I + + + +K L+L N + + L T+++LE + L+ N+I + G
Sbjct: 289 LDMLFLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSG 348
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
++ L N++ L++ +NKIS +E + + L LE+ D++I+ I +L L ++ L L +N
Sbjct: 349 IEKLKNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENY 408
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
IS I L++LT L+ ++L N + I+++E L T +
Sbjct: 409 ISDISPLSNLTNLHEINLGANEISDIKSVEELGKRTSI 446
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 22/131 (16%)
Query: 117 EIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYL 176
+I GL+++ NLE L L + IE + +LK+L ++ +
Sbjct: 585 DITGLEYMTNLENLTLEGVGLKNIEFISNLKQLN----------------------DVNV 622
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEK 236
N+I + L+SL L L+L NR++ + L ++ +L L L+EN + + L+ +
Sbjct: 623 SHNQIEDVTPLSSLKNLQWLNLTDNRIKDVTVLGSMLDLLSLKLAENEIRDVRPLIQLGQ 682
Query: 237 LETLDVAYNKI 247
T+DV K+
Sbjct: 683 WGTIDVRRQKV 693
>gi|148381055|ref|YP_001255596.1| capsular polysaccharide biosynthesis protein [Clostridium botulinum
A str. ATCC 3502]
gi|153931337|ref|YP_001385426.1| internalin [Clostridium botulinum A str. ATCC 19397]
gi|153937191|ref|YP_001388833.1| internalin [Clostridium botulinum A str. Hall]
gi|387819365|ref|YP_005679712.1| putative Internalin A/LRR surface protein [Clostridium botulinum
H04402 065]
gi|148290539|emb|CAL84667.1| putative capsular polysaccharide biosynthesis leucine rich repeat
protein [Clostridium botulinum A str. ATCC 3502]
gi|152927381|gb|ABS32881.1| leucine-rich repeat protein [Clostridium botulinum A str. ATCC
19397]
gi|152933105|gb|ABS38604.1| leucine-rich repeat protein [Clostridium botulinum A str. Hall]
gi|322807409|emb|CBZ04983.1| putative Internalin A/LRR surface protein [Clostridium botulinum
H04402 065]
Length = 364
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 128/224 (57%), Gaps = 3/224 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I+ ++ I L L+EL+L DN++ I L +L ++ IL L N+I +I L + + L++L
Sbjct: 93 IQNLDGIENLLRLQELDLTDNEIDDISALSSLKDISILKLGKNKITDIASLKNCSKLKEL 152
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
YL NK+ I + + +K+ +L+L N + I L L NL+E+YL N + + + +
Sbjct: 153 YLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKNLKEIYLHNNGVIDFEPILRM 212
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+L ++L N ++++ L +L +LY+ +NG+ + L S L+ LDV+ NKI+ +
Sbjct: 213 QQLTTVNLAGNNFTDMKDINQLKSLMELYIGDNGIKDLTFLKSMSNLKVLDVSNNKITDM 272
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
+I++L ++E I+ N + D + +LEN K L + L N +
Sbjct: 273 NSISNLNGIEELNISSNNIRD---IKILENFKNLSKVDLRYNNI 313
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 104/186 (55%)
Query: 99 LDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
L +++++ LD S I+ + G+++L L++L L N+I I + LK + +L+LG NK
Sbjct: 77 LRDVVDIKKLDASNKGIQNLDGIENLLRLQELDLTDNEIDDISALSSLKDISILKLGKNK 136
Query: 159 IRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
I I +L + L+ELYL NK+ I L + K+ IL L N + I L L NL ++
Sbjct: 137 ITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKNLKEI 196
Query: 219 YLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
YL NG+ E +L ++L T+++A N + +++I L L E +I DN + D + +
Sbjct: 197 YLHNNGVIDFEPILRMQQLTTVNLAGNNFTDMKDINQLKSLMELYIGDNGIKDLTFLKSM 256
Query: 279 ENNKQL 284
N K L
Sbjct: 257 SNLKVL 262
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 134/260 (51%), Gaps = 8/260 (3%)
Query: 6 VPNTDEVDNDNLVTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIERLL 65
V + ++D N N++ +EN Q LD D E + + S +D I L
Sbjct: 80 VVDIKKLDASNKGIQNLDGIENLLRLQ-ELDLTDNEIDDISALSSLKD-------ISILK 131
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I I ++ + LKEL L+DN++ I L + ILDL+ N + +I L L
Sbjct: 132 LGKNKITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLK 191
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL+++YL +N + E + +++L + L N +++++ L +L ELY+G N I +
Sbjct: 192 NLKEIYLHNNGVIDFEPILRMQQLTTVNLAGNNFTDMKDINQLKSLMELYIGDNGIKDLT 251
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L S++ L +L + N++ + ++ L + +L +S N + I+ L + + L +D+ YN
Sbjct: 252 FLKSMSNLKVLDVSNNKITDMNSISNLNGIEELNISSNNIRDIKILENFKNLSKVDLRYN 311
Query: 246 KISIIQNIAHLTELQEFWIN 265
I I+ + + +L E +++
Sbjct: 312 NIKNIEPLKNCKQLSEVFLD 331
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 90/167 (53%), Gaps = 1/167 (0%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N + I + L LKE+ L++N + E + + L ++L+ N ++K ++ L
Sbjct: 176 LNRNHVADISILPTLKNLKEIYLHNNGVIDFEPILRMQQLTTVNLAGNNFTDMKDINQLK 235
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+L +LY+ N I + + + LKVL++ +NKI + ++ L +EEL + N I I
Sbjct: 236 SLMELYIGDNGIKDLTFLKSMSNLKVLDVSNNKITDMNSISNLNGIEELNISSNNIRDIK 295
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN-GLTTIENL 231
L + L+ + L+ N ++ IE L+ L++++L ++ + IEN+
Sbjct: 296 ILENFKNLSKVDLRYNNIKNIEPLKNCKQLSEVFLDKDVDIRPIENM 342
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 139 KIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSL 198
++ +V +KKL G + IENL L+EL L N+I I L+SL ++IL L
Sbjct: 76 RLRDVVDIKKLDASNKGIQNLDGIENLLR---LQELDLTDNEIDDISALSSLKDISILKL 132
Query: 199 QCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ I +L+ + L +LYL +N + I L + EK+ LD+ N ++ I + L
Sbjct: 133 GKNKITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKN 192
Query: 259 LQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
L+E ++++N V D+ + ++ QL T+ L N
Sbjct: 193 LKEIYLHNNGVIDFEPILRMQ---QLTTVNLAGN 223
>gi|423508516|ref|ZP_17485047.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuA2-1]
gi|402457812|gb|EJV89567.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuA2-1]
Length = 966
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 134/240 (55%), Gaps = 7/240 (2%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ LDLS N I I+ + L NL+ L
Sbjct: 233 INEIAGLEYMTNLEKLTLRESNVTDISVISGLRHLKYLDLSSNPIESIQPVSKLENLDML 292
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKI+ + + +KK+K+L+L N I+ + L + +LEE+YL N+IS + + L
Sbjct: 293 FLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSGIEKL 352
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ +L + N++ +E + ++NL +L ++++ + I +L K++ L++ N IS I
Sbjct: 353 KNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENYISDI 412
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNK----QLQTIYLDRNPVAQD---PNYRRK 303
+++LT L E + N++SD +V L Q Q I+LD V ++ P Y K
Sbjct: 413 SPLSNLTNLHEINLGANEISDIKSVEELGKRTSIDIQRQKIFLDEASVDEEIKIPVYNFK 472
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 108/182 (59%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I+ I+ + L L L L DN++ + L + ++ILDL N I+++ L +
Sbjct: 272 LSSNPIESIQPVSKLENLDMLFLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVL 331
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+LE++YL +N+IS + ++ LK +K+L +G+NKI +E + ++NL EL + ++I I
Sbjct: 332 SLEEVYLANNQISNLSGIEKLKNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDIS 391
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
+L+ L K+ +L+L+ N + I L LTNL ++ L N ++ I+++ K ++D+
Sbjct: 392 SLSKLVKIQVLNLEENYISDISPLSNLTNLHEINLGANEISDIKSVEELGKRTSIDIQRQ 451
Query: 246 KI 247
KI
Sbjct: 452 KI 453
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 93/158 (58%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N I + + + +K L+L N + + L T+++LE + L+ N+I + G
Sbjct: 289 LDMLFLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSG 348
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
++ L N++ L++ +NKIS +E + + L LE+ D++I+ I +L L ++ L L +N
Sbjct: 349 IEKLKNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENY 408
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
IS I L++LT L+ ++L N + I+++E L T +
Sbjct: 409 ISDISPLSNLTNLHEINLGANEISDIKSVEELGKRTSI 446
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + LK+L + +
Sbjct: 563 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLESLTLEGLGLKNIEFISDLKQLNAVNVSH 622
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
N+I I L L NL+ L L N I + + + L L L N +R + L
Sbjct: 623 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGPMLDLLSLKLAGNEVRDVRPL 675
>gi|327285528|ref|XP_003227485.1| PREDICTED: leucine-rich repeat-containing protein 49-like [Anolis
carolinensis]
Length = 746
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L + C I++I+N+ +L+ L L+L DN+I I L L L L LG
Sbjct: 170 IDGEEHLRLLSFQHNC---ITRIQNISNLQHLIFLDLYDNQIEEISGLSTLRLLRVLLLG 226
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
N+I RI NL +L L++L L N++ +ENL L +L L L+ N LT +ENL + L
Sbjct: 227 NNRIRRISNLDNLLSLDVLDLHGNQISVVENLSHLNSLRVLNLARNCLTYVENLSGLDSL 286
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ YN+I +++++ L LQ +++ N +S ++ V L ++ L I LD NP+AQ+
Sbjct: 287 MELNLRYNQIRLVKDVDTLPSLQRLFLSFNDISRFDDVLCLADSTSLSEITLDGNPIAQE 346
Query: 298 PNYRRKI 304
Y+ +
Sbjct: 347 TWYKPTV 353
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 91/157 (57%), Gaps = 1/157 (0%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL L +L L NRIR I L
Sbjct: 177 RLLSFQHNCITRIQNISNLQHLIFLDLYDNQIEEISGLSTLRLLRVLLLGNNRIRRISNL 236
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
D+L +L+ L L N+IS +EN+ HL L+VL L N + +ENL GL +L EL L N+I
Sbjct: 237 DNLLSLDVLDLHGNQISVVENLSHLNSLRVLNLARNCLTYVENLSGLDSLMELNLRYNQI 296
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
+ ++ +L L L L N + +++ L + T L
Sbjct: 297 RLVKDVDTLPSLQRLFLSFNDISRFDDVLCLADSTSL 333
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 113/207 (54%), Gaps = 21/207 (10%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L +L LDL N+I EI GL L L L L +N+I +I N
Sbjct: 176 LRLLSFQHNCITRIQNISNLQHLIFLDLYDNQIEEISGLSTLRLLRVLLLGNNRIRRISN 235
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D+L L VL+L N+I ++ENL L +L L L +N ++ ++NL+ L L L+L+ N+
Sbjct: 236 LDNLLSLDVLDLHGNQISVVENLSHLNSLRVLNLARNCLTYVENLSGLDSLMELNLRYNQ 295
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+R +++++ L +L +L+LS N ++ +++L +A T L E
Sbjct: 296 IRLVKDVDTLPSLQRLFLSFNDISRFDDVLC-------------------LADSTSLSEI 336
Query: 263 WINDNQVSD--WNTVNVLENNKQLQTI 287
++ N ++ W VL + QL+ +
Sbjct: 337 TLDGNPIAQETWYKPTVLHHMMQLRQL 363
>gi|423404808|ref|ZP_17381981.1| hypothetical protein ICW_05206, partial [Bacillus cereus BAG2X1-2]
gi|401646245|gb|EJS63875.1| hypothetical protein ICW_05206, partial [Bacillus cereus BAG2X1-2]
Length = 823
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 134/240 (55%), Gaps = 7/240 (2%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ LDLS N I I+ + L NL+ L
Sbjct: 233 INEIAGLEYMTNLEKLTLRESNVTDISVISGLRHLKYLDLSSNPIESIQPVSKLENLDML 292
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKI+ + + +KK+K+L+L N I+ + L + +LEE+YL N+IS + + L
Sbjct: 293 FLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSGIEKL 352
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ +L + N++ +E + ++NL +L ++++ + I +L K++ L++ N IS I
Sbjct: 353 KNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENYISDI 412
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNK----QLQTIYLDRNPVAQD---PNYRRK 303
+++LT L E + N++SD +V L Q Q I+LD V ++ P Y K
Sbjct: 413 SPLSNLTNLHEINLGANEISDIKSVEELGKRTSIDIQRQKIFLDEASVDEEIKIPVYNFK 472
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 108/182 (59%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I+ I+ + L L L L DN++ + L + ++ILDL N I+++ L +
Sbjct: 272 LSSNPIESIQPVSKLENLDMLFLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVL 331
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+LE++YL +N+IS + ++ LK +K+L +G+NKI +E + ++NL EL + ++I I
Sbjct: 332 SLEEVYLANNQISNLSGIEKLKNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDIS 391
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
+L+ L K+ +L+L+ N + I L LTNL ++ L N ++ I+++ K ++D+
Sbjct: 392 SLSKLVKIQVLNLEENYISDISPLSNLTNLHEINLGANEISDIKSVEELGKRTSIDIQRQ 451
Query: 246 KI 247
KI
Sbjct: 452 KI 453
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 93/158 (58%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N I + + + +K L+L N + + L T+++LE + L+ N+I + G
Sbjct: 289 LDMLFLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSG 348
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
++ L N++ L++ +NKIS +E + + L LE+ D++I+ I +L L ++ L L +N
Sbjct: 349 IEKLKNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENY 408
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
IS I L++LT L+ ++L N + I+++E L T +
Sbjct: 409 ISDISPLSNLTNLHEINLGANEISDIKSVEELGKRTSI 446
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I++I GL+++ NLE L L + IE + +LK+L + +
Sbjct: 563 EDLLQIKKLEILKEKGKEIKDITGLEYMTNLENLTLEGVGLKNIEFISNLKQLNDVNVSH 622
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
N+I + L L NL+ L L N+I + L S+ L L L N +R + L
Sbjct: 623 NQIEDVTPLSSLKNLQWLNLTDNRIKDVTVLGSMLDLLSLKLAENEIRDVRPL 675
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 73/137 (53%), Gaps = 13/137 (9%)
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E++ +KKL++L+ +I+ I L+ +TNLE L L + I+ +++L +LN +++
Sbjct: 563 EDLLQIKKLEILKEKGKEIKDITGLEYMTNLENLTLEGVGLKNIEFISNLKQLNDVNVSH 622
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQ 260
N++ + L +L NL L L++N + + L S L +L +A N+I ++ +
Sbjct: 623 NQIEDVTPLSSLKNLQWLNLTDNRIKDVTVLGSMLDLLSLKLAENEIRDVRPLI------ 676
Query: 261 EFWINDNQVSDWNTVNV 277
Q+ W T++V
Sbjct: 677 -------QLGQWGTIDV 686
>gi|423491498|ref|ZP_17468142.1| hypothetical protein IEW_00396, partial [Bacillus cereus CER057]
gi|401159750|gb|EJQ67131.1| hypothetical protein IEW_00396, partial [Bacillus cereus CER057]
Length = 793
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 134/240 (55%), Gaps = 7/240 (2%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ LDLS + I I+ + L NL+ L
Sbjct: 231 INEIAGLEYMTNLEKLTLRESNVTDISVISGLRHLKYLDLSSSPIESIQPVSKLENLDML 290
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKI+ + + +KK+K+L+L N I+ + L + +LEE+YL N+IS + + L
Sbjct: 291 FLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSGIEKL 350
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+N+L + N++ +E + ++NL +L ++++ + I L K++ L++ N IS I
Sbjct: 351 KNVNLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISPLSKLVKIQVLNLEENYISDI 410
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNK----QLQTIYLDRNPVAQD---PNYRRK 303
+++LT L E + N++SD +V L Q Q I+LD V ++ P Y K
Sbjct: 411 SPLSNLTNLHEINLGANEISDIKSVEELGKRTSIDIQRQKIFLDEASVDEEIKIPVYNFK 470
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 91/158 (57%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N I + + + +K L+L N + + L T+++LE + L+ N+I + G
Sbjct: 287 LDMLFLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSG 346
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
++ L N+ L++ +NKIS +E + + L LE+ D++I+ I L L ++ L L +N
Sbjct: 347 IEKLKNVNLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISPLSKLVKIQVLNLEENY 406
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
IS I L++LT L+ ++L N + I+++E L T +
Sbjct: 407 ISDISPLSNLTNLHEINLGANEISDIKSVEELGKRTSI 444
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 83/143 (58%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I+ L L N IK + + + +L+E+ L +NQ++ + ++ L N+ +L + N+I +++
Sbjct: 309 IKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSGIEKLKNVNLLWIGNNKISDVEP 368
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ ++NL +L + ++I I + L K++VL L +N I I L LTNL E+ LG N+
Sbjct: 369 ISKMSNLIELEIADSEIKDISPLSKLVKIQVLNLEENYISDISPLSNLTNLHEINLGANE 428
Query: 181 ISRIDNLASLTKLNILSLQCNRL 203
IS I ++ L K + +Q ++
Sbjct: 429 ISDIKSVEELGKRTSIDIQRQKI 451
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+LK + +
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDLTGLEYMTNLENLTLEGVGLKNIEFISNLKQLKDVNVSH 620
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
NKI I L L NL+ L L N I + L S+ L L L N +R + L
Sbjct: 621 NKIEDITPLSSLENLQWLNLADNHIKDVSVLGSMLDLLSLKLAGNEIRDVRPL 673
>gi|260821866|ref|XP_002606324.1| hypothetical protein BRAFLDRAFT_67566 [Branchiostoma floridae]
gi|229291665|gb|EEN62334.1| hypothetical protein BRAFLDRAFT_67566 [Branchiostoma floridae]
Length = 844
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 109/187 (58%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
++G +HL L L N ISKI+++ +L++L L+L DN+I I L L +L L LG
Sbjct: 187 LEGEEHL---RLLNLQHNLISKIQHLSNLRRLIFLDLYDNQIEEITGLAALKSLRVLMLG 243
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L KL++L L N + IENL+ L+ L L L+ N + +ENL + L
Sbjct: 244 KNRIKKIANLDNLQKLDVLDLHGNLISKIENLQHLSELRVLNLAGNSIIHVENLSGMDSL 303
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ N+I + + L +Q +++ N +S ++ + L + L + LD NP+AQ+
Sbjct: 304 AELNLRRNQIVNVTEVDTLPSIQRLFLSFNNISSFDDIACLGESASLSEVSLDGNPLAQE 363
Query: 298 PNYRRKI 304
Y++ I
Sbjct: 364 AFYKQTI 370
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 112/198 (56%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL L+ NLI KI+++ L L L+LYDNQ+ I L L +L +L L NRI++I L
Sbjct: 194 RLLNLQHNLISKIQHLSNLRRLIFLDLYDNQIEEITGLAALKSLRVLMLGKNRIKKIANL 253
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
D+L L+ L L N ISKIEN+ HL +L+VL L N I +ENL G+ +L EL L +N+I
Sbjct: 254 DNLQKLDVLDLHGNLISKIENLQHLSELRVLNLAGNSIIHVENLSGMDSLAELNLRRNQI 313
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + +L + L L N + + +++ L LSE L N L+ E
Sbjct: 314 VNVTEVDTLPSIQRLFLSFNNISSFDDIACLGESAS--LSEVSLDG--NPLAQE------ 363
Query: 242 VAYNKISIIQNIAHLTEL 259
A+ K +I++++ L +L
Sbjct: 364 -AFYKQTILKHMVQLRQL 380
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 90/149 (60%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L L N ++ I++L L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 193 LRLLNLQHNLISKIQHLSNLRRLIFLDLYDNQIEEITGLAALKSLRVLMLGKNRIKKIAN 252
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D+L+KL VL+L N I IENL L+ L L L N I ++NL+ + L L+L+ N+
Sbjct: 253 LDNLQKLDVLDLHGNLISKIENLQHLSELRVLNLAGNSIIHVENLSGMDSLAELNLRRNQ 312
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENL 231
+ + ++ L ++ +L+LS N +++ +++
Sbjct: 313 IVNVTEVDTLPSIQRLFLSFNNISSFDDI 341
>gi|423485774|ref|ZP_17462456.1| hypothetical protein IEU_00397, partial [Bacillus cereus BtB2-4]
gi|423501709|ref|ZP_17478326.1| hypothetical protein IEY_04936, partial [Bacillus cereus CER074]
gi|401152608|gb|EJQ60040.1| hypothetical protein IEY_04936, partial [Bacillus cereus CER074]
gi|402440926|gb|EJV72907.1| hypothetical protein IEU_00397, partial [Bacillus cereus BtB2-4]
Length = 775
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 134/240 (55%), Gaps = 7/240 (2%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ LDLS + I I+ + L NL+ L
Sbjct: 231 INEIAGLEYMTNLEKLTLRESNVTDISVISGLRHLKYLDLSSSPIESIQPVSKLENLDML 290
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKI+ + + +KK+K+L+L N I+ + L + +LEE+YL N+IS + + L
Sbjct: 291 FLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSGIEKL 350
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+N+L + N++ +E + ++NL +L ++++ + I L K++ L++ N IS I
Sbjct: 351 KNVNLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISPLSKLVKIQVLNLEENYISDI 410
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNK----QLQTIYLDRNPVAQD---PNYRRK 303
+++LT L E + N++SD +V L Q Q I+LD V ++ P Y K
Sbjct: 411 SPLSNLTNLHEINLGANEISDIKSVEELGKRTSIDIQRQKIFLDEASVDEEIKIPVYNFK 470
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 91/158 (57%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N I + + + +K L+L N + + L T+++LE + L+ N+I + G
Sbjct: 287 LDMLFLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSG 346
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
++ L N+ L++ +NKIS +E + + L LE+ D++I+ I L L ++ L L +N
Sbjct: 347 IEKLKNVNLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISPLSKLVKIQVLNLEENY 406
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
IS I L++LT L+ ++L N + I+++E L T +
Sbjct: 407 ISDISPLSNLTNLHEINLGANEISDIKSVEELGKRTSI 444
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 83/143 (58%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I+ L L N IK + + + +L+E+ L +NQ++ + ++ L N+ +L + N+I +++
Sbjct: 309 IKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSGIEKLKNVNLLWIGNNKISDVEP 368
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ ++NL +L + ++I I + L K++VL L +N I I L LTNL E+ LG N+
Sbjct: 369 ISKMSNLIELEIADSEIKDISPLSKLVKIQVLNLEENYISDISPLSNLTNLHEINLGANE 428
Query: 181 ISRIDNLASLTKLNILSLQCNRL 203
IS I ++ L K + +Q ++
Sbjct: 429 ISDIKSVEELGKRTSIDIQRQKI 451
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+LK + +
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDLTGLEYMTNLENLTLEGVGLKNIEFISNLKQLKDVNVSH 620
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
NKI I L L NL+ L L N I + L S+ L L L N +R + L
Sbjct: 621 NKIEDITPLSSLENLQWLNLADNHIKDVSVLGSMLDLLSLKLAGNEIRDVRPL 673
>gi|423474556|ref|ZP_17451271.1| hypothetical protein IEO_00014, partial [Bacillus cereus BAG6X1-1]
gi|402438407|gb|EJV70420.1| hypothetical protein IEO_00014, partial [Bacillus cereus BAG6X1-1]
Length = 801
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 134/240 (55%), Gaps = 7/240 (2%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ LDLS N I I+ + L NL+ L
Sbjct: 233 INEIAGLEYMTNLEKLTLRESNVTDISVISGLRHLKYLDLSSNPIESIQPVSKLENLDML 292
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKI+ + + +KK+K+L+L N I+ + L + +LEE+YL N+IS + + L
Sbjct: 293 FLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSGIEKL 352
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ +L + N++ +E + ++NL +L ++++ + I +L K++ L++ N IS I
Sbjct: 353 KNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENYISDI 412
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNK----QLQTIYLDRNPVAQD---PNYRRK 303
+++LT L E + N++SD +V L Q Q I+LD V ++ P Y K
Sbjct: 413 SPLSNLTNLHEINLGANEISDIKSVEELGKRTSIDIQRQKIFLDEASVDEEIKIPVYNFK 472
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 108/182 (59%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I+ I+ + L L L L DN++ + L + ++ILDL N I+++ L +
Sbjct: 272 LSSNPIESIQPVSKLENLDMLFLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVL 331
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+LE++YL +N+IS + ++ LK +K+L +G+NKI +E + ++NL EL + ++I I
Sbjct: 332 SLEEVYLANNQISNLSGIEKLKNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDIS 391
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
+L+ L K+ +L+L+ N + I L LTNL ++ L N ++ I+++ K ++D+
Sbjct: 392 SLSKLVKIQVLNLEENYISDISPLSNLTNLHEINLGANEISDIKSVEELGKRTSIDIQRQ 451
Query: 246 KI 247
KI
Sbjct: 452 KI 453
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 93/158 (58%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N I + + + +K L+L N + + L T+++LE + L+ N+I + G
Sbjct: 289 LDMLFLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTPLFTVLSLEEVYLANNQISNLSG 348
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
++ L N++ L++ +NKIS +E + + L LE+ D++I+ I +L L ++ L L +N
Sbjct: 349 IEKLKNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISSLSKLVKIQVLNLEENY 408
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
IS I L++LT L+ ++L N + I+++E L T +
Sbjct: 409 ISDISPLSNLTNLHEINLGANEISDIKSVEELGKRTSI 446
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 59/113 (52%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I++I GL+++ NLE L L + IE + +LK+L + +
Sbjct: 563 EDLLQIKKLEILKEKGKEIKDITGLEYMTNLENLTLEGVGLKNIEFISNLKQLNDVNVSH 622
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
N+I + L L NL+ L L N+I + L S+ L L L N +R + L
Sbjct: 623 NQIEDVTPLSSLKNLQWLNLTDNRIKDVTVLGSMLDLLSLKLAENEIRDVRPL 675
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 73/137 (53%), Gaps = 13/137 (9%)
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E++ +KKL++L+ +I+ I L+ +TNLE L L + I+ +++L +LN +++
Sbjct: 563 EDLLQIKKLEILKEKGKEIKDITGLEYMTNLENLTLEGVGLKNIEFISNLKQLNDVNVSH 622
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQ 260
N++ + L +L NL L L++N + + L S L +L +A N+I ++ +
Sbjct: 623 NQIEDVTPLSSLKNLQWLNLTDNRIKDVTVLGSMLDLLSLKLAENEIRDVRPLI------ 676
Query: 261 EFWINDNQVSDWNTVNV 277
Q+ W T++V
Sbjct: 677 -------QLGQWGTIDV 686
>gi|290996702|ref|XP_002680921.1| leucine rich repeat protein [Naegleria gruberi]
gi|284094543|gb|EFC48177.1| leucine rich repeat protein [Naegleria gruberi]
Length = 759
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 119/224 (53%), Gaps = 15/224 (6%)
Query: 28 THGNQ------MSLDNPDEESEAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLT 81
T GN MS + P + + +T ESK E+ V ERL L + K I T
Sbjct: 215 TRGNSPKINYLMSQNTP--QVKEKTVESKIEET----VSNERLNLDRRNLTKCPIITGDT 268
Query: 82 TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIE 141
LK L L N++ I NL+ L +L LDL N+I++I LD L +L L L N I KIE
Sbjct: 269 NLKLLNLQYNEIRSISNLNNLTSLVFLDLYGNKIKKISNLDSLLSLRVLMLGKNMIEKIE 328
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
+++L KL VL+L NKIR I NL L + L L N IS + N+ L LN L+L+ N
Sbjct: 329 GLEYLHKLDVLDLHGNKIREISNLSSLKEVRVLNLAGNLISNVSNVRGLQSLNELNLRKN 388
Query: 202 RLRTIENLEALTNLTQLYLSENG---LTTIENLLSNEKLETLDV 242
+ +E ++ L NL +L+LS N ++E++L + L L +
Sbjct: 389 MIEKVEEIDELPNLKRLFLSSNNIQLFASVESVLRSTSLTELSM 432
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 97/172 (56%)
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL+ L L N+I I N+++L L L+L NKI+ I NLD L +L L LGKN I +I+
Sbjct: 269 NLKLLNLQYNEIRSISNLNNLTSLVFLDLYGNKIKKISNLDSLLSLRVLMLGKNMIEKIE 328
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L L KL++L L N++R I NL +L + L L+ N ++ + N+ + L L++ N
Sbjct: 329 GLEYLHKLDVLDLHGNKIREISNLSSLKEVRVLNLAGNLISNVSNVRGLQSLNELNLRKN 388
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
I ++ I L L+ +++ N + + +V + + L + +D NP+ Q+
Sbjct: 389 MIEKVEEIDELPNLKRLFLSSNNIQLFASVESVLRSTSLTELSMDDNPLQQN 440
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 16/146 (10%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L+L N+I+KIE + L L L+L+ N++ I NL +L + +L+L+ N I + +
Sbjct: 317 LMLGKNMIEKIEGLEYLHKLDVLDLHGNKIREISNLSSLKEVRVLNLAGNLISNVSNVRG 376
Query: 124 LANLEKLYLCSNKISKIENVD---HLKKLKVLELGDNKIRIIENLDGL---TNLEELYLG 177
L +L +L L N I K+E +D +LK+ L L N I++ +++ + T+L EL +
Sbjct: 377 LQSLNELNLRKNMIEKVEEIDELPNLKR---LFLSSNNIQLFASVESVLRSTSLTELSMD 433
Query: 178 KNKIS-------RIDNLASLTKLNIL 196
N + R+ LAS+ KL IL
Sbjct: 434 DNPLQQNLGQKYRVITLASMRKLVIL 459
>gi|153939809|ref|YP_001392382.1| internalin [Clostridium botulinum F str. Langeland]
gi|384463356|ref|YP_005675951.1| putative internalin [Clostridium botulinum F str. 230613]
gi|152935705|gb|ABS41203.1| putative internalin [Clostridium botulinum F str. Langeland]
gi|295320373|gb|ADG00751.1| putative internalin [Clostridium botulinum F str. 230613]
Length = 364
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 127/224 (56%), Gaps = 3/224 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I+ ++ I L L+EL+L DN++ I L +L ++ IL L N+I +I L + + L++L
Sbjct: 93 IQNLDGIENLLRLQELDLTDNEIDDISALSSLKDISILKLGKNKITDIASLKNCSKLKEL 152
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
YL NK+ I + + +K+ +L+L N + I L L NL+E+YL N + + +
Sbjct: 153 YLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKNLKEIYLHNNGVIDFKPILRM 212
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+L ++L N ++++ L +L +LY+ +NG+ + L S L+ LDV+ NKI+ +
Sbjct: 213 QQLTTVNLAGNNFTDMQDINQLKSLMELYIGDNGIKDLTFLKSMSNLKVLDVSNNKITDM 272
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
+I++L ++E I+ N + D + +LEN K L + L N +
Sbjct: 273 NSISNLNGIEELNISSNYIRD---IKILENFKNLSKVDLRYNNI 313
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 104/186 (55%)
Query: 99 LDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
L +++++ LD S I+ + G+++L L++L L N+I I + LK + +L+LG NK
Sbjct: 77 LRDVVDIKKLDASNKGIQNLDGIENLLRLQELDLTDNEIDDISALSSLKDISILKLGKNK 136
Query: 159 IRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
I I +L + L+ELYL NK+ I L + K+ IL L N + I L L NL ++
Sbjct: 137 ITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKNLKEI 196
Query: 219 YLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
YL NG+ + +L ++L T+++A N + +Q+I L L E +I DN + D + +
Sbjct: 197 YLHNNGVIDFKPILRMQQLTTVNLAGNNFTDMQDINQLKSLMELYIGDNGIKDLTFLKSM 256
Query: 279 ENNKQL 284
N K L
Sbjct: 257 SNLKVL 262
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 8/260 (3%)
Query: 6 VPNTDEVDNDNLVTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIERLL 65
V + ++D N N++ +EN Q LD D E + + S +D I L
Sbjct: 80 VVDIKKLDASNKGIQNLDGIENLLRLQ-ELDLTDNEIDDISALSSLKD-------ISILK 131
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I I ++ + LKEL L+DN++ I L + ILDL+ N + +I L L
Sbjct: 132 LGKNKITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLK 191
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL+++YL +N + + + +++L + L N +++++ L +L ELY+G N I +
Sbjct: 192 NLKEIYLHNNGVIDFKPILRMQQLTTVNLAGNNFTDMQDINQLKSLMELYIGDNGIKDLT 251
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L S++ L +L + N++ + ++ L + +L +S N + I+ L + + L +D+ YN
Sbjct: 252 FLKSMSNLKVLDVSNNKITDMNSISNLNGIEELNISSNYIRDIKILENFKNLSKVDLRYN 311
Query: 246 KISIIQNIAHLTELQEFWIN 265
I I+ + + +L E +++
Sbjct: 312 NIKNIEPLKNCKQLSEVFVD 331
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 139 KIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSL 198
++ +V +KKL G + IENL L+EL L N+I I L+SL ++IL L
Sbjct: 76 RLRDVVDIKKLDASNKGIQNLDGIENLLR---LQELDLTDNEIDDISALSSLKDISILKL 132
Query: 199 QCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ I +L+ + L +LYL +N + I L + EK+ LD+ N ++ I + L
Sbjct: 133 GKNKITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKN 192
Query: 259 LQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
L+E ++++N V D+ + ++ QL T+ L N
Sbjct: 193 LKEIYLHNNGVIDFKPILRMQ---QLTTVNLAGN 223
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 90/167 (53%), Gaps = 1/167 (0%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N + I + L LKE+ L++N + + + + L ++L+ N +++ ++ L
Sbjct: 176 LNRNHVADISILPTLKNLKEIYLHNNGVIDFKPILRMQQLTTVNLAGNNFTDMQDINQLK 235
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+L +LY+ N I + + + LKVL++ +NKI + ++ L +EEL + N I I
Sbjct: 236 SLMELYIGDNGIKDLTFLKSMSNLKVLDVSNNKITDMNSISNLNGIEELNISSNYIRDIK 295
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN-GLTTIENL 231
L + L+ + L+ N ++ IE L+ L+++++ ++ + IEN+
Sbjct: 296 ILENFKNLSKVDLRYNNIKNIEPLKNCKQLSEVFVDKDVDIRPIENM 342
>gi|153874196|ref|ZP_02002506.1| internalin E [Beggiatoa sp. PS]
gi|152069339|gb|EDN67493.1| internalin E [Beggiatoa sp. PS]
Length = 246
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 96/159 (60%), Gaps = 3/159 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +E + LT L+ L YDN+ + +E L L L LD S+N+IR++K L L NL+ L
Sbjct: 76 ISNLEPLRALTNLQNLICYDNKTSDLEPLRALTKLWYLDCSYNKIRDLKPLRALTNLQGL 135
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
CS+ +KI N++ ++ L L+ NKI +E L LTNL+EL NKIS ++ L +L
Sbjct: 136 D-CSH--NKINNLEPMRALTDLDCSYNKISDLEPLRALTNLQELICSHNKISDLEPLRTL 192
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
L L N++ +IE L ALTNL +LY SEN ++ +E
Sbjct: 193 KNLQRLYCWRNQISSIEPLHALTNLQELYCSENQISDLE 231
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 99/175 (56%), Gaps = 4/175 (2%)
Query: 98 NLDTLINLEILDLSF-NRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
+L+ + N + LD + I ++ L L NL+ L NK S +E + L KL L+
Sbjct: 58 DLEEIFNWQHLDCCIGDDISNLEPLRALTNLQNLICYDNKTSDLEPLRALTKLWYLDCSY 117
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
NKIR ++ L LTNL+ L NKI+ ++ + +LT L+ N++ +E L ALTNL
Sbjct: 118 NKIRDLKPLRALTNLQGLDCSHNKINNLEPMRALTDLDC---SYNKISDLEPLRALTNLQ 174
Query: 217 QLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
+L S N ++ +E L + + L+ L N+IS I+ + LT LQE + ++NQ+SD
Sbjct: 175 ELICSHNKISDLEPLRTLKNLQRLYCWRNQISSIEPLHALTNLQELYCSENQISD 229
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 7/142 (4%)
Query: 154 LGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
+GD+ I +E L LTNL+ L NK S ++ L +LTKL L N++R ++ L ALT
Sbjct: 72 IGDD-ISNLEPLRALTNLQNLICYDNKTSDLEPLRALTKLWYLDCSYNKIRDLKPLRALT 130
Query: 214 NLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWN 273
NL L S N + +E + L LD +YNKIS ++ + LT LQE + N++SD
Sbjct: 131 NLQGLDCSHNKINNLEPM---RALTDLDCSYNKISDLEPLRALTNLQELICSHNKISDLE 187
Query: 274 TVNVLENNKQLQTIYLDRNPVA 295
+ L+N LQ +Y RN ++
Sbjct: 188 PLRTLKN---LQRLYCWRNQIS 206
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Query: 68 WNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANL 127
+N I+ ++ + LT L+ L+ N+ I NL+ + L LD S+N+I +++ L L NL
Sbjct: 117 YNKIRDLKPLRALTNLQGLDCSHNK---INNLEPMRALTDLDCSYNKISDLEPLRALTNL 173
Query: 128 EKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKIS 182
++L NKIS +E + LK L+ L N+I IE L LTNL+ELY +N+IS
Sbjct: 174 QELICSHNKISDLEPLRTLKNLQRLYCWRNQISSIEPLHALTNLQELYCSENQIS 228
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 89/185 (48%), Gaps = 7/185 (3%)
Query: 112 FNRIREIKGLDHLANLEKLYLC-SNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTN 170
F I + L+ + N + L C + IS +E + L L+ L DNK +E L LT
Sbjct: 50 FFEIADDSDLEEIFNWQHLDCCIGDDISNLEPLRALTNLQNLICYDNKTSDLEPLRALTK 109
Query: 171 LEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIEN 230
L L NKI + L +LT L L N+ I NLE + LT L S N ++ +E
Sbjct: 110 LWYLDCSYNKIRDLKPLRALTNLQGLDCSHNK---INNLEPMRALTDLDCSYNKISDLEP 166
Query: 231 LLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLD 290
L + L+ L ++NKIS ++ + L LQ + NQ+S ++ L N LQ +Y
Sbjct: 167 LRALTNLQELICSHNKISDLEPLRTLKNLQRLYCWRNQISSIEPLHALTN---LQELYCS 223
Query: 291 RNPVA 295
N ++
Sbjct: 224 ENQIS 228
>gi|126277135|ref|XP_001367973.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 1
[Monodelphis domestica]
Length = 754
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L +L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 181 RLLNFQHNFITRIQNISNLQSLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 240
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
D+L +L+ L L N+ISKIENV HL L+VL L N + +++L+GL++L EL L N+I
Sbjct: 241 DNLKSLDVLDLHGNQISKIENVSHLCDLRVLNLARNFLNDVDDLNGLSSLTELNLRHNQI 300
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + E++ L + T L + +T N ++ E
Sbjct: 301 TSVRDVDNLPCLQRLFLSYNNISCFEDILCLADSTSL----SDITLDGNPIAQE------ 350
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +I+Q++ L +L
Sbjct: 351 -SWYKHTILQHMMQLRQL 367
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 102/170 (60%)
Query: 135 NKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLN 194
N I++I+N+ +L+ L L+L DN+I I L L +L L LGKN+I +I NL +L L+
Sbjct: 188 NFITRIQNISNLQSLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNLDNLKSLD 247
Query: 195 ILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIA 254
+L L N++ IEN+ L +L L L+ N L +++L L L++ +N+I+ ++++
Sbjct: 248 VLDLHGNQISKIENVSHLCDLRVLNLARNFLNDVDDLNGLSSLTELNLRHNQITSVRDVD 307
Query: 255 HLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKI 304
+L LQ +++ N +S + + L ++ L I LD NP+AQ+ Y+ I
Sbjct: 308 NLPCLQRLFLSYNNISCFEDILCLADSTSLSDITLDGNPIAQESWYKHTI 357
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 122/212 (57%), Gaps = 5/212 (2%)
Query: 85 ELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVD 144
L L +LTV +D +L +L+ N I I+ + +L +L L L N+I +I +
Sbjct: 160 RLTLERQKLTVCPVIDGEEHLRLLNFQHNFITRIQNISNLQSLIFLDLYDNQIEEISGLS 219
Query: 145 HLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR 204
L+ L+VL LG N+I+ I NLD L +L+ L L N+IS+I+N++ L L +L+L N L
Sbjct: 220 TLRSLRVLLLGKNRIKKISNLDNLKSLDVLDLHGNQISKIENVSHLCDLRVLNLARNFLN 279
Query: 205 TIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNI---AHLTELQE 261
+++L L++LT+L L N +T++ ++ + L+ L ++YN IS ++I A T L +
Sbjct: 280 DVDDLNGLSSLTELNLRHNQITSVRDVDNLPCLQRLFLSYNNISCFEDILCLADSTSLSD 339
Query: 262 FWINDNQVS--DWNTVNVLENNKQLQTIYLDR 291
++ N ++ W +L++ QL+ + + R
Sbjct: 340 ITLDGNPIAQESWYKHTILQHMMQLRQLDMKR 371
>gi|300867614|ref|ZP_07112262.1| Leucine Rich Repeat domain protein (fragment) [Oscillatoria sp. PCC
6506]
gi|300334375|emb|CBN57432.1| Leucine Rich Repeat domain protein (fragment) [Oscillatoria sp. PCC
6506]
Length = 335
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/222 (37%), Positives = 121/222 (54%), Gaps = 34/222 (15%)
Query: 88 LYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLK 147
L+DNQ++ I L++L NL L L N+I +I L L NL LYL N+IS I + +LK
Sbjct: 139 LFDNQISDISPLESLTNLTTLILYNNQINDISSLAGLTNLTTLYLYENQISDINPIANLK 198
Query: 148 KLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIE 207
KLK L + NKI ++ L LTNL +L L N+I ID+L+SL L L+L N++ +
Sbjct: 199 KLKNLLIFSNKISDLKPLAFLTNLTKLVLFNNQILDIDSLSSLINLTELNLGNNQVSDVG 258
Query: 208 NLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDN 267
L++LTNL++LYL N I+N I+ +Q++ +L+ L F +N
Sbjct: 259 ALQSLTNLSELYLFNN---MIDN----------------IAPLQSLTNLSWLDLF---NN 296
Query: 268 QVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
Q+SD + + L N L + L RNP+A VCP
Sbjct: 297 QISDVDPLQSLSN---LSFLDLRRNPIANK---------VCP 326
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 112/202 (55%)
Query: 79 MLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKIS 138
L L EL L +Q+ I L +L L L+L N I +I L L+NL L L N+IS
Sbjct: 42 FLANLTELNLKRSQVNDISPLSSLTKLTKLNLGSNSISDISPLQSLSNLTTLILDVNQIS 101
Query: 139 KIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSL 198
I +++ L L L + N+I I L LT L L L N+IS I L SLT L L L
Sbjct: 102 DISHLESLTNLTELVIDTNQISDISPLTKLTKLTTLILFDNQISDISPLESLTNLTTLIL 161
Query: 199 QCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ I +L LTNLT LYL EN ++ I + + +KL+ L + NKIS ++ +A LT
Sbjct: 162 YNNQINDISSLAGLTNLTTLYLYENQISDINPIANLKKLKNLLIFSNKISDLKPLAFLTN 221
Query: 259 LQEFWINDNQVSDWNTVNVLEN 280
L + + +NQ+ D ++++ L N
Sbjct: 222 LTKLVLFNNQILDIDSLSSLIN 243
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 97/174 (55%), Gaps = 3/174 (1%)
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
+ LANL +L L ++++ I + L KL L LG N I I L L+NL L L N+I
Sbjct: 41 EFLANLTELNLKRSQVNDISPLSSLTKLTKLNLGSNSISDISPLQSLSNLTTLILDVNQI 100
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
S I +L SLT L L + N++ I L LT LT L L +N ++ I L S L TL
Sbjct: 101 SDISHLESLTNLTELVIDTNQISDISPLTKLTKLTTLILFDNQISDISPLESLTNLTTLI 160
Query: 242 VAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+ N+I+ I ++A LT L ++ +NQ+SD +N + N K+L+ + + N ++
Sbjct: 161 LYNNQINDISSLAGLTNLTTLYLYENQISD---INPIANLKKLKNLLIFSNKIS 211
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%)
Query: 53 DEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSF 112
D S + + L L N + + + LT L EL L++N + I L +L NL LDL
Sbjct: 236 DSLSSLINLTELNLGNNQVSDVGALQSLTNLSELYLFNNMIDNIAPLQSLTNLSWLDLFN 295
Query: 113 NRIREIKGLDHLANLEKLYLCSNKIS 138
N+I ++ L L+NL L L N I+
Sbjct: 296 NQISDVDPLQSLSNLSFLDLRRNPIA 321
>gi|388511123|gb|AFK43623.1| unknown [Lotus japonicus]
Length = 474
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 122/232 (52%), Gaps = 3/232 (1%)
Query: 81 TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKI 140
+++ L+L L + L NLE LDL FN + ++GL NL+ L + NK+ +
Sbjct: 19 SSVTSLQLTFKALCDVSCLAIFSNLEKLDLKFNNLTSLEGLKSCVNLKWLSVVENKLESL 78
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E + L KL VL G NK++ I+ + L L L L N+I+ I L +LN L L
Sbjct: 79 EGIQGLTKLTVLNAGKNKLKSIDQVSSLVGLRALILNDNEITSICKFDQLKELNTLVLSK 138
Query: 201 NRLRTI-ENLEALTNLTQLYLSENGLTTI-ENLLSNEKLETLDVAYNKISIIQN-IAHLT 257
N +R I E L + ++T+L LS L I +L S +L L +A+N+I + + + H +
Sbjct: 139 NPIRKIGEALMKVKSITKLSLSYCELQGINTSLKSCVELIELRLAHNEIKTLPDELIHNS 198
Query: 258 ELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
+LQ + +N ++ W+ V VL++ L+ + L NPVA RKIK P
Sbjct: 199 KLQNLDLGNNVITTWSEVKVLKSLTNLKNLNLQGNPVASSDKITRKIKKALP 250
>gi|390367949|ref|XP_791987.3| PREDICTED: protein phosphatase 1 regulatory subunit 7-like
[Strongylocentrotus purpuratus]
Length = 522
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
+T + +++L+ + I+NLD INL +LDLS N IR I+ L + +L +L L N+IS
Sbjct: 165 VTKVYDVDLHGVNIGTIKNLDMFINLRVLDLSCNCIRNIENLANNKDLRELKLYDNRISA 224
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTN-LEELYLGKNKISRID--NLASLTKLNIL 196
I N++ L++L L+L NKIR I L+ L+ L L N + +I+ LA+ ++L L
Sbjct: 225 IANIERLQELCSLQLQHNKIRTIGKGLALSRKLKILRLDSNYLGKIEARELAACSQLTYL 284
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
+ N+L ++ L AL++L +L + N L + +L KL+ LDV+ NKI+ + + L
Sbjct: 285 DVSSNKLDSLSALNALSSLEELRATHNSLRAVTDLKRCRKLQELDVSNNKIADLSGLKSL 344
Query: 257 TELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
L I+ NQ++ +T+ ++ + L TI + N
Sbjct: 345 HNLTVLMISHNQLTS-DTLKAVDKLRALHTIDISHN 379
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 133/250 (53%), Gaps = 10/250 (4%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI-KGLDHL 124
L N I+ IEN+ L+EL+LYDN+++ I N++ L L L L N+IR I KGL
Sbjct: 195 LSCNCIRNIENLANNKDLRELKLYDNRISAIANIERLQELCSLQLQHNKIRTIGKGLALS 254
Query: 125 ANLEKLYLCSNKISKIE--NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKIS 182
L+ L L SN + KIE + +L L++ NK+ + L+ L++LEEL N +
Sbjct: 255 RKLKILRLDSNYLGKIEARELAACSQLTYLDVSSNKLDSLSALNALSSLEELRATHNSLR 314
Query: 183 RIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT--TIENLLSNEKLETL 240
+ +L KL L + N++ + L++L NLT L +S N LT T++ + L T+
Sbjct: 315 AVTDLKRCRKLQELDVSNNKIADLSGLKSLHNLTVLMISHNQLTSDTLKAVDKLRALHTI 374
Query: 241 DVAYNKISIIQNIA-HLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV----A 295
D+++NK++ + + L+ + +N++ W V L + L +Y+ NP
Sbjct: 375 DISHNKLTELDFLVDQFPALEVLNVRNNRIVRWKAVLSLHRCQCLSELYVQGNPFTLPEG 434
Query: 296 QDPNYRRKIK 305
+ P+Y ++++
Sbjct: 435 EKPSYHQELQ 444
>gi|323332691|gb|EGA74096.1| Sds22p [Saccharomyces cerevisiae AWRI796]
gi|323354221|gb|EGA86065.1| Sds22p [Saccharomyces cerevisiae VL3]
Length = 197
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 84/123 (68%), Gaps = 5/123 (4%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLK--ELELYDNQLTVIE-NLDTLINLEILDLSFNRIRE 117
+++L LR NLI+ I + +L K +L+ YDN++ I N++ L L LDLSFN+I+
Sbjct: 68 LKQLCLRQNLIESISEVEVLPHDKIVDLDFYDNKIKHISSNVNKLTKLTSLDLSFNKIKH 127
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE--NLDGLTNLEELY 175
IK L++L +LE LY N ISKIEN+ LK LK LELG NK+ IE + +GL+NLEE++
Sbjct: 128 IKNLENLTDLENLYFVQNSISKIENLSTLKSLKNLELGGNKVHSIEPDSFEGLSNLEEIW 187
Query: 176 LGK 178
LGK
Sbjct: 188 LGK 190
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 27/168 (16%)
Query: 104 NLEILDLSFNRIREIKGLD--HLANLEKLYLCSNKISKIENVDHLKKLKVLELG--DNKI 159
++E++DL +I+ ++ L+ NL++L L N I I V+ L K+++L DNKI
Sbjct: 43 DVEVIDLVHLKIKSLEDLNLYRFKNLKQLCLRQNLIESISEVEVLPHDKIVDLDFYDNKI 102
Query: 160 RIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLY 219
+ I + N+ LTKL L L N+++ I+NLE LT+L LY
Sbjct: 103 KHISS---------------------NVNKLTKLTSLDLSFNKIKHIKNLENLTDLENLY 141
Query: 220 LSENGLTTIENLLSNEKLETLDVAYNKISIIQ--NIAHLTELQEFWIN 265
+N ++ IENL + + L+ L++ NK+ I+ + L+ L+E W+
Sbjct: 142 FVQNSISKIENLSTLKSLKNLELGGNKVHSIEPDSFEGLSNLEEIWLG 189
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 149 LKVLELGDNKIRIIE--NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC--NRLR 204
++V++L KI+ +E NL NL++L L +N I I + L I+ L N+++
Sbjct: 44 VEVIDLVHLKIKSLEDLNLYRFKNLKQLCLRQNLIESISEVEVLPHDKIVDLDFYDNKIK 103
Query: 205 TIE-NLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFW 263
I N+ LT LT L LS N + I+NL + LE L N IS I+N++ L L+
Sbjct: 104 HISSNVNKLTKLTSLDLSFNKIKHIKNLENLTDLENLYFVQNSISKIENLSTLKSLKNLE 163
Query: 264 INDNQV 269
+ N+V
Sbjct: 164 LGGNKV 169
>gi|325840710|ref|ZP_08167130.1| putative internalin A [Turicibacter sp. HGF1]
gi|325490216|gb|EGC92551.1| putative internalin A [Turicibacter sp. HGF1]
Length = 510
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 107/188 (56%)
Query: 93 LTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVL 152
+T I L+ +NL LDLS+N I+++ L L+ L LYL +N+I + + L KL+ L
Sbjct: 95 ITNITGLEECVNLVGLDLSYNDIQDLSPLASLSKLTNLYLENNQIQDLSPLASLNKLQEL 154
Query: 153 ELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEAL 212
L N IR + L L +L+ L+L N+I I +L +L+ L L+L N++ I L L
Sbjct: 155 HLSHNTIRNVSPLHQLVHLQMLHLADNEIVDISSLNTLSNLTELTLDHNQIYNISGLSNL 214
Query: 213 TNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDW 272
TNL L L N + I L + L LD++YN+I II +A LT L +++ NQ++D
Sbjct: 215 TNLITLTLDRNQIEDISALATLINLNALDLSYNQIKIINALASLTRLSVLYLDYNQINDL 274
Query: 273 NTVNVLEN 280
+ ++ L N
Sbjct: 275 SALSSLIN 282
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 104/197 (52%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L +N I+ + + L+ L L L +NQ+ + L +L L+ L LS N IR + L L
Sbjct: 112 LSYNDIQDLSPLASLSKLTNLYLENNQIQDLSPLASLNKLQELHLSHNTIRNVSPLHQLV 171
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+L+ L+L N+I I +++ L L L L N+I I L LTNL L L +N+I I
Sbjct: 172 HLQMLHLADNEIVDISSLNTLSNLTELTLDHNQIYNISGLSNLTNLITLTLDRNQIEDIS 231
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
LA+L LN L L N+++ I L +LT L+ LYL N + + L S L L ++ N
Sbjct: 232 ALATLINLNALDLSYNQIKIINALASLTRLSVLYLDYNQINDLSALSSLINLTKLGLSNN 291
Query: 246 KISIIQNIAHLTELQEF 262
I I + LT+L E
Sbjct: 292 SIQDISPLMTLTKLTEL 308
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 104/186 (55%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I+ + + L L+EL L N + + L L++L++L L+ N I +I L+
Sbjct: 132 LYLENNQIQDLSPLASLNKLQELHLSHNTIRNVSPLHQLVHLQMLHLADNEIVDISSLNT 191
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L+NL +L L N+I I + +L L L L N+I I L L NL L L N+I
Sbjct: 192 LSNLTELTLDHNQIYNISGLSNLTNLITLTLDRNQIEDISALATLINLNALDLSYNQIKI 251
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I+ LASLT+L++L L N++ + L +L NLT+L LS N + I L++ KL L++
Sbjct: 252 INALASLTRLSVLYLDYNQINDLSALSSLINLTKLGLSNNSIQDISPLMTLTKLTELNLM 311
Query: 244 YNKISI 249
+I++
Sbjct: 312 QQRITL 317
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 107/203 (52%), Gaps = 3/203 (1%)
Query: 72 KKIENIHML---TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
K I NI L L L+L N + + L +L L L L N+I+++ L L L+
Sbjct: 93 KGITNITGLEECVNLVGLDLSYNDIQDLSPLASLSKLTNLYLENNQIQDLSPLASLNKLQ 152
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L+L N I + + L L++L L DN+I I +L+ L+NL EL L N+I I L+
Sbjct: 153 ELHLSHNTIRNVSPLHQLVHLQMLHLADNEIVDISSLNTLSNLTELTLDHNQIYNISGLS 212
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
+LT L L+L N++ I L L NL L LS N + I L S +L L + YN+I+
Sbjct: 213 NLTNLITLTLDRNQIEDISALATLINLNALDLSYNQIKIINALASLTRLSVLYLDYNQIN 272
Query: 249 IIQNIAHLTELQEFWINDNQVSD 271
+ ++ L L + +++N + D
Sbjct: 273 DLSALSSLINLTKLGLSNNSIQD 295
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 81/165 (49%), Gaps = 22/165 (13%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N I+ + +H L L+ L L DN++ I +L+TL NL L L N+I I G
Sbjct: 151 LQELHLSHNTIRNVSPLHQLVHLQMLHLADNEIVDISSLNTLSNLTELTLDHNQIYNISG 210
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L NL L L N+I I + L L L+L N+I+II L LT L LYL N+
Sbjct: 211 LSNLTNLITLTLDRNQIEDISALATLINLNALDLSYNQIKIINALASLTRLSVLYLDYNQ 270
Query: 181 ISRIDNLASL----------------------TKLNILSLQCNRL 203
I+ + L+SL TKL L+L R+
Sbjct: 271 INDLSALSSLINLTKLGLSNNSIQDISPLMTLTKLTELNLMQQRI 315
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 27/205 (13%)
Query: 109 DLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGL 168
D++ ++R G+ LYL I+ I ++ L L+L N I+ + L L
Sbjct: 75 DITKGQLRSFTGI--------LYLDHKGITNITGLEECVNLVGLDLSYNDIQDLSPLASL 126
Query: 169 TNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTI 228
+ L LYL N+I + LASL KL L L N +R + L L +L L+L++N + I
Sbjct: 127 SKLTNLYLENNQIQDLSPLASLNKLQELHLSHNTIRNVSPLHQLVHLQMLHLADNEIVDI 186
Query: 229 ENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT-------------- 274
+L + L L + +N+I I +++LT L ++ NQ+ D +
Sbjct: 187 SSLNTLSNLTELTLDHNQIYNISGLSNLTNLITLTLDRNQIEDISALATLINLNALDLSY 246
Query: 275 -----VNVLENNKQLQTIYLDRNPV 294
+N L + +L +YLD N +
Sbjct: 247 NQIKIINALASLTRLSVLYLDYNQI 271
>gi|887862|gb|AAA69530.1| internalin, partial [Listeria monocytogenes]
Length = 344
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 119/233 (51%), Gaps = 23/233 (9%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N I I + LT+L++L L NQ+T ++ L L LE LD+S N++ +I
Sbjct: 92 LNRLELSSNTISDISALSGLTSLQQLSL-GNQVTDLKPLANLTTLERLDISSNKVSDISV 150
Query: 121 LDHLANLEKLYLCSNKISKIE------NVDHLK----------------KLKVLELGDNK 158
L L NLE L +N+IS I N+D L L L+L +N+
Sbjct: 151 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ 210
Query: 159 IRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
I + L GLT L EL LG N+IS I LA LT L L L N+L I + L NLT L
Sbjct: 211 ISNLAPLPGLTKLTELKLGANQISNIXPLAGLTALTNLELNENQLEDISPISNLKNLTYL 270
Query: 219 YLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L N ++ I + S KL+ L NK+S + ++A+LT + NQ+SD
Sbjct: 271 TLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISD 323
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 125/248 (50%), Gaps = 26/248 (10%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
LT L ++ + +NQ+ I L L NL L L N+I +I L +L NL +L L SN IS
Sbjct: 45 LTKLVDILMNNNQIADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISD 104
Query: 140 IENVDHLKKLKVLELGD---------------------NKIRIIENLDGLTNLEELYLGK 178
I + L L+ L LG+ NK+ I L LTNLE L
Sbjct: 105 ISALSGLTSLQQLSLGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATN 164
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N+IS I L LT L+ LSL N+L+ I L +LTNLT L L+ N ++ + L KL
Sbjct: 165 NQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLPGLTKLT 224
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL----DRNPV 294
L + N+IS I +A LT L +N+NQ+ D + ++ L+N L T+Y D +PV
Sbjct: 225 ELKLGANQISNIXPLAGLTALTNLELNENQLEDISPISNLKNLTYL-TLYFNNISDISPV 283
Query: 295 AQDPNYRR 302
+ +R
Sbjct: 284 SSLTKLQR 291
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 114/208 (54%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ERL + N + I + LT L+ L +NQ++ I L L NL+ L L+ N++++I
Sbjct: 133 TTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI 192
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L NL L L +N+IS + + L KL L+LG N+I I L GLT L L L +
Sbjct: 193 GTLASLTNLTDLDLANNQISNLAPLPGLTKLTELKLGANQISNIXPLAGLTALTNLELNE 252
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N++ I +++L L L+L N + I + +LT L +L+ N ++ + +L + +
Sbjct: 253 NQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNIN 312
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWIND 266
L +N+IS + +A+LT + + +ND
Sbjct: 313 WLSAGHNQISDLTPLANLTRITQLGLND 340
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 94/189 (49%), Gaps = 22/189 (11%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+K +E L+ N I I + +LT L EL L NQL I L +L NL LDL+ N+I
Sbjct: 152 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQI 211
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK---IRIIENL------- 165
+ L L L +L L +N+IS I + L L LEL +N+ I I NL
Sbjct: 212 SNLAPLPGLTKLTELKLGANQISNIXPLAGLTALTNLELNENQLEDISPISNLKNLTYLT 271
Query: 166 ------------DGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
LT L+ L+ NK+S + +LA+LT +N LS N++ + L LT
Sbjct: 272 LYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 331
Query: 214 NLTQLYLSE 222
+TQL L++
Sbjct: 332 RITQLGLND 340
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 82/181 (45%), Gaps = 46/181 (25%)
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+D + L+ LG I+ I+ L+ L NL ++ N+++ I L LTKL + + N+
Sbjct: 1 LDXVTTLQADRLG---IKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQ 57
Query: 203 LRTI---ENLEALTNLT-------------------QLYLSEN---------GLTTIENL 231
+ I NL LT LT +L LS N GLT+++ L
Sbjct: 58 IADITPLANLSNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQL 117
Query: 232 -LSNE-----------KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
L N+ LE LD++ NK+S I +A LT L+ +NQ+SD + +L
Sbjct: 118 SLGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILT 177
Query: 280 N 280
N
Sbjct: 178 N 178
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 195 ILSLQCNRL--RTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQN 252
+ +LQ +RL ++I+ LE L NLTQ+ S N LT I L KL + + N+I+ I
Sbjct: 4 VTTLQADRLGIKSIDGLEYLNNLTQINFSNNQLTDITPLKDLTKLVDILMNNNQIADITP 63
Query: 253 IAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+A+L+ L + +NQ++D ++ L+N L + L N ++
Sbjct: 64 LANLSNLTGLTLFNNQITD---IDPLKNLTNLNRLELSSNTIS 103
>gi|126277138|ref|XP_001368004.1| PREDICTED: leucine-rich repeat-containing protein 49 isoform 2
[Monodelphis domestica]
Length = 688
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L +L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQSLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
D+L +L+ L L N+ISKIENV HL L+VL L N + +++L+GL++L EL L N+I
Sbjct: 175 DNLKSLDVLDLHGNQISKIENVSHLCDLRVLNLARNFLNDVDDLNGLSSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + E++ L + T L + +T N ++ E
Sbjct: 235 TSVRDVDNLPCLQRLFLSYNNISCFEDILCLADSTSL----SDITLDGNPIAQE------ 284
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +I+Q++ L +L
Sbjct: 285 -SWYKHTILQHMMQLRQL 301
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L+ L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNFITRIQNISNLQSLIFLDLYDNQIEEISGLSTLRSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L +++L L
Sbjct: 165 KNRIKKISNLDNLKSLDVLDLHGNQISKIENVSHLCDLRVLNLARNFLNDVDDLNGLSSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S + + L ++ L I LD NP+AQ+
Sbjct: 225 TELNLRHNQITSVRDVDNLPCLQRLFLSYNNISCFEDILCLADSTSLSDITLDGNPIAQE 284
Query: 298 PNYRRKI 304
Y+ I
Sbjct: 285 SWYKHTI 291
>gi|170754542|ref|YP_001782739.1| internalin [Clostridium botulinum B1 str. Okra]
gi|429246424|ref|ZP_19209744.1| internalin [Clostridium botulinum CFSAN001628]
gi|169119754|gb|ACA43590.1| leucine-rich repeat protein [Clostridium botulinum B1 str. Okra]
gi|428756514|gb|EKX79066.1| internalin [Clostridium botulinum CFSAN001628]
Length = 364
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 126/224 (56%), Gaps = 3/224 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I+ ++ I L L+EL+L DN++ I L +L ++ IL L N+I +I L + + L++L
Sbjct: 93 IQNLDGIENLLRLQELDLTDNEIDDISALSSLKDISILKLGKNKITDIASLKNCSKLKEL 152
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
YL NK+ I + + +K+ +L+L N + I L L NL+E+YL N + + +
Sbjct: 153 YLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKNLKEIYLHNNGVIDFKPILRM 212
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+L ++L N ++++ L +L +LY+ +NG+ + L S L+ LDV+ NKI +
Sbjct: 213 QQLTTVNLAGNNFTDMQDINQLKSLMELYIGDNGIKDLTFLKSMSNLKVLDVSNNKIMDM 272
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
+I++L ++E I+ N + D + +LEN K L + L N +
Sbjct: 273 NSISNLNGIEELNISSNYIRD---IKILENFKNLSKVDLRYNNI 313
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 104/186 (55%)
Query: 99 LDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
L +++++ LD S I+ + G+++L L++L L N+I I + LK + +L+LG NK
Sbjct: 77 LRDVVDIKKLDASNKGIQNLDGIENLLRLQELDLTDNEIDDISALSSLKDISILKLGKNK 136
Query: 159 IRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
I I +L + L+ELYL NK+ I L + K+ IL L N + I L L NL ++
Sbjct: 137 ITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKNLKEI 196
Query: 219 YLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVL 278
YL NG+ + +L ++L T+++A N + +Q+I L L E +I DN + D + +
Sbjct: 197 YLHNNGVIDFKPILRMQQLTTVNLAGNNFTDMQDINQLKSLMELYIGDNGIKDLTFLKSM 256
Query: 279 ENNKQL 284
N K L
Sbjct: 257 SNLKVL 262
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 134/260 (51%), Gaps = 8/260 (3%)
Query: 6 VPNTDEVDNDNLVTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEVCIERLL 65
V + ++D N N++ +EN Q LD D E + + S +D I L
Sbjct: 80 VVDIKKLDASNKGIQNLDGIENLLRLQ-ELDLTDNEIDDISALSSLKD-------ISILK 131
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I I ++ + LKEL L+DN++ I L + ILDL+ N + +I L L
Sbjct: 132 LGKNKITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLK 191
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NL+++YL +N + + + +++L + L N +++++ L +L ELY+G N I +
Sbjct: 192 NLKEIYLHNNGVIDFKPILRMQQLTTVNLAGNNFTDMQDINQLKSLMELYIGDNGIKDLT 251
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L S++ L +L + N++ + ++ L + +L +S N + I+ L + + L +D+ YN
Sbjct: 252 FLKSMSNLKVLDVSNNKIMDMNSISNLNGIEELNISSNYIRDIKILENFKNLSKVDLRYN 311
Query: 246 KISIIQNIAHLTELQEFWIN 265
I I+ + + +L E +++
Sbjct: 312 NIKNIEPLKNCKQLSEVFVD 331
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 139 KIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSL 198
++ +V +KKL G + IENL L+EL L N+I I L+SL ++IL L
Sbjct: 76 RLRDVVDIKKLDASNKGIQNLDGIENLLR---LQELDLTDNEIDDISALSSLKDISILKL 132
Query: 199 QCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ I +L+ + L +LYL +N + I L + EK+ LD+ N ++ I + L
Sbjct: 133 GKNKITDIASLKNCSKLKELYLFDNKVIDITPLKNFEKIYILDLNRNHVADISILPTLKN 192
Query: 259 LQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
L+E ++++N V D+ + ++ QL T+ L N
Sbjct: 193 LKEIYLHNNGVIDFKPILRMQ---QLTTVNLAGN 223
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 90/167 (53%), Gaps = 1/167 (0%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N + I + L LKE+ L++N + + + + L ++L+ N +++ ++ L
Sbjct: 176 LNRNHVADISILPTLKNLKEIYLHNNGVIDFKPILRMQQLTTVNLAGNNFTDMQDINQLK 235
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+L +LY+ N I + + + LKVL++ +NKI + ++ L +EEL + N I I
Sbjct: 236 SLMELYIGDNGIKDLTFLKSMSNLKVLDVSNNKIMDMNSISNLNGIEELNISSNYIRDIK 295
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN-GLTTIENL 231
L + L+ + L+ N ++ IE L+ L+++++ ++ + IEN+
Sbjct: 296 ILENFKNLSKVDLRYNNIKNIEPLKNCKQLSEVFVDKDVDIRPIENM 342
>gi|411116572|ref|ZP_11389059.1| leucine rich repeat protein [Oscillatoriales cyanobacterium JSC-12]
gi|410712675|gb|EKQ70176.1| leucine rich repeat protein [Oscillatoriales cyanobacterium JSC-12]
Length = 321
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 124/224 (55%), Gaps = 3/224 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I + + LT LK+L L +N++T IE L+ L +L L LS+N+I +I + L NL L
Sbjct: 86 IADLSPLRSLTHLKQLYLGNNRITDIEPLEALTDLTHLYLSYNQISDIHAIGKLINLNYL 145
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L SN+I I + LK+L+ L+L NK+R + L L NL L L N+I I L SL
Sbjct: 146 FLSSNQIEDIGALQALKQLEGLDLVSNKVRNLNPLQPLLNLTYLDLSFNQIKDISPLKSL 205
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
TKL LS+ + + L ++ NL L +S N ++ + +L S L +L + N+I+ +
Sbjct: 206 TKLQELSVSAQAIVDLRPLNSMINLVHLDVSGNQISDLTSLQSLTNLVSLGLGGNRITDV 265
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
+ L++L + +NQV T+ L K L+ +Y+ NP+
Sbjct: 266 TPLRFLSKLNTLHLGENQV---KTLQPLATLKSLKILYVQGNPL 306
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 110/210 (52%), Gaps = 3/210 (1%)
Query: 85 ELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVD 144
L+L D+++ + L +L +L+ L L NRI +I+ L+ L +L LYL N+IS I +
Sbjct: 78 SLDLTDSKIADLSPLRSLTHLKQLYLGNNRITDIEPLEALTDLTHLYLSYNQISDIHAIG 137
Query: 145 HLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR 204
L L L L N+I I L L LE L L NK+ ++ L L L L L N+++
Sbjct: 138 KLINLNYLFLSSNQIEDIGALQALKQLEGLDLVSNKVRNLNPLQPLLNLTYLDLSFNQIK 197
Query: 205 TIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWI 264
I L++LT L +L +S + + L S L LDV+ N+IS + ++ LT L +
Sbjct: 198 DISPLKSLTKLQELSVSAQAIVDLRPLNSMINLVHLDVSGNQISDLTSLQSLTNLVSLGL 257
Query: 265 NDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
N+++D + L +L T++L N V
Sbjct: 258 GGNRITDVTPLRFLS---KLNTLHLGENQV 284
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 92/162 (56%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I+ I + L L+ L+L N++ + L L+NL LDLSFN+I++I L
Sbjct: 145 LFLSSNQIEDIGALQALKQLEGLDLVSNKVRNLNPLQPLLNLTYLDLSFNQIKDISPLKS 204
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L L++L + + I + ++ + L L++ N+I + +L LTNL L LG N+I+
Sbjct: 205 LTKLQELSVSAQAIVDLRPLNSMINLVHLDVSGNQISDLTSLQSLTNLVSLGLGGNRITD 264
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGL 225
+ L L+KLN L L N+++T++ L L +L LY+ N L
Sbjct: 265 VTPLRFLSKLNTLHLGENQVKTLQPLATLKSLKILYVQGNPL 306
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 93/187 (49%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L L +N I I I L L L L NQ+ I L L LE LDL N++R +
Sbjct: 120 LTHLYLSYNQISDIHAIGKLINLNYLFLSSNQIEDIGALQALKQLEGLDLVSNKVRNLNP 179
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL L L N+I I + L KL+ L + I + L+ + NL L + N+
Sbjct: 180 LQPLLNLTYLDLSFNQIKDISPLKSLTKLQELSVSAQAIVDLRPLNSMINLVHLDVSGNQ 239
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + +L SLT L L L NR+ + L L+ L L+L EN + T++ L + + L+ L
Sbjct: 240 ISDLTSLQSLTNLVSLGLGGNRITDVTPLRFLSKLNTLHLGENQVKTLQPLATLKSLKIL 299
Query: 241 DVAYNKI 247
V N +
Sbjct: 300 YVQGNPL 306
>gi|334318441|ref|XP_003340090.1| PREDICTED: leucine-rich repeat-containing protein 49 [Monodelphis
domestica]
Length = 693
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 117/198 (59%), Gaps = 12/198 (6%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L +L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 120 RLLNFQHNFITRIQNISNLQSLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 179
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
D+L +L+ L L N+ISKIENV HL L+VL L N + +++L+GL++L EL L N+I
Sbjct: 180 DNLKSLDVLDLHGNQISKIENVSHLCDLRVLNLARNFLNDVDDLNGLSSLTELNLRHNQI 239
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + ++ +L L L L N + E++ L + T L + +T N ++ E
Sbjct: 240 TSVRDVDNLPCLQRLFLSYNNISCFEDILCLADSTSL----SDITLDGNPIAQE------ 289
Query: 242 VAYNKISIIQNIAHLTEL 259
++ K +I+Q++ L +L
Sbjct: 290 -SWYKHTILQHMMQLRQL 306
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L+ L L+L DN+I I L L +L L LG
Sbjct: 113 IDGEEHL---RLLNFQHNFITRIQNISNLQSLIFLDLYDNQIEEISGLSTLRSLRVLLLG 169
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L +++L L
Sbjct: 170 KNRIKKISNLDNLKSLDVLDLHGNQISKIENVSHLCDLRVLNLARNFLNDVDDLNGLSSL 229
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S + + L ++ L I LD NP+AQ+
Sbjct: 230 TELNLRHNQITSVRDVDNLPCLQRLFLSYNNISCFEDILCLADSTSLSDITLDGNPIAQE 289
Query: 298 PNYRRKI 304
Y+ I
Sbjct: 290 SWYKHTI 296
>gi|440783643|ref|ZP_20961256.1| Internalin-A [Clostridium pasteurianum DSM 525]
gi|440219386|gb|ELP58599.1| Internalin-A [Clostridium pasteurianum DSM 525]
Length = 365
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 5/275 (1%)
Query: 23 EAVENTHGNQMSLDNPDEESEAETTESKAEDEESKE--VCIERLLLRWNLIKKIENIHML 80
A++ G+ M D + + + K D + E ++ L L N I+KI+ + L
Sbjct: 45 SAIDKNSGDIMEGD-VSGITNLDASSKKISDLDGLENLTALKNLNLAGNSIEKIDLLKNL 103
Query: 81 TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKI 140
T+L+ L L DNQ+ I ++ L NLE L ++ N+I IK L ++ +L L L N I I
Sbjct: 104 TSLQVLTLNDNQIQDISPIEKLTNLERLYINNNQIDNIKSLRNITSLTILQLDGNNIKDI 163
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
+ L KL L LG+N+I I++L LTNLE L L N ++ I L+ LTKL +L +
Sbjct: 164 TPIKDLTKLNTLWLGNNQINEIDSLKNLTNLEVLRLNNNVLADISTLSKLTKLKVLRIYA 223
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQ 260
N + I L LT L L + ++ + L + KL L + N IS I ++ L L+
Sbjct: 224 NGISNISPLSGLTELEALMANHCQISDVTPLKALNKLTALTLEKNNISDIYSLKDLKSLK 283
Query: 261 EFWINDNQVSDWNTVNVLENNKQLQTIYLD--RNP 293
+ + DN + D++ +N Q + LD NP
Sbjct: 284 QLTLKDNTIKDYSPTEAYYHNLQYRDFDLDSKSNP 318
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 34/157 (21%)
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT------- 216
++ G+TNL+ KIS +D L +LT L L+L N +IE ++ L NLT
Sbjct: 58 DVSGITNLDA---SSKKISDLDGLENLTALKNLNLAGN---SIEKIDLLKNLTSLQVLTL 111
Query: 217 ------------------QLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
+LY++ N + I++L + L L + N I I I LT+
Sbjct: 112 NDNQIQDISPIEKLTNLERLYINNNQIDNIKSLRNITSLTILQLDGNNIKDITPIKDLTK 171
Query: 259 LQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
L W+ +NQ+ N ++ L+N L+ + L+ N +A
Sbjct: 172 LNTLWLGNNQI---NEIDSLKNLTNLEVLRLNNNVLA 205
>gi|423620804|ref|ZP_17596614.1| hypothetical protein IIO_06106, partial [Bacillus cereus VD115]
gi|401246251|gb|EJR52600.1| hypothetical protein IIO_06106, partial [Bacillus cereus VD115]
Length = 851
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 132/231 (57%), Gaps = 4/231 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ +DL+ N I+ I ++ L N+ L
Sbjct: 231 INEIAGLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLENINML 290
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKIS + + +KK+K L+L N I I+ L L+ +++LYL N+IS + + L
Sbjct: 291 FLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQL 350
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ + +L + N++ +E++ ++NL +L ++++ + I L KL+ L++ N IS I
Sbjct: 351 SNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDI 410
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPVAQD 297
+++LT+L E + N+++D V L + Q Q I+LD V ++
Sbjct: 411 SPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQKIFLDEASVDEE 461
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 103/182 (56%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N IK I I L + L L DN+++ + L + ++ LDL N I +I+ L L+
Sbjct: 270 LTSNPIKNIHPIEQLENINMLFLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLS 329
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+++LYL +N+IS + ++ L +++L +G+NKI +E++ ++NL EL + ++I I
Sbjct: 330 TMKQLYLANNQISDLTGINQLSNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDIS 389
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L+ L KL +L+L+ N + I L LT+L ++ L N + + + K ++D+
Sbjct: 390 PLSKLGKLQVLNLEENYISDISPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQ 449
Query: 246 KI 247
KI
Sbjct: 450 KI 451
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 105/188 (55%), Gaps = 9/188 (4%)
Query: 111 SFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTN 170
S I EI GL+H+ NLEKL L + ++ I + L+ LK ++L N I+ I ++ L N
Sbjct: 227 SGEGINEIAGLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLEN 286
Query: 171 LEELYLGKNKISRIDNLASLTKL---NILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
+ L+L NKIS +L L+K+ L L N + I+ L L+ + QLYL+ N ++
Sbjct: 287 INMLFLRDNKIS---DLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISD 343
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ + +E L + NKIS +++I+ ++ L E I D+++ D + ++ L +LQ +
Sbjct: 344 LTGINQLSNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKL---GKLQVL 400
Query: 288 YLDRNPVA 295
L+ N ++
Sbjct: 401 NLEENYIS 408
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 86/148 (58%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK I+ L L N I+ I+ + L+T+K+L L +NQ++ + ++ L N+E+L + N+I
Sbjct: 304 SKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQLSNVELLWIGNNKI 363
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++ + ++NL +L + ++I I + L KL+VL L +N I I L LT+L E+
Sbjct: 364 SNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDISPLSNLTDLHEMN 423
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRL 203
LG N+I+ + + L K + +Q ++
Sbjct: 424 LGANEIADVRPVEELGKRISIDIQRQKI 451
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+L ++ +
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDVTGLEYMKNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 620
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
N+I I L L N++ L L N I + + S+ L L+L N +R ++ L L
Sbjct: 621 NQIEDITPLSSLKNVQWLNLADNHIKDVTVIGSMLDLLSLNLAGNEIR---DVRPLIQLG 677
Query: 217 QLYLSENGLTTI 228
Q + + G TI
Sbjct: 678 QWFSIDVGRQTI 689
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 68/118 (57%)
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E++ +K L++L+ +I+ + L+ + NLE L L + I+ +++L +LNI+++
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDVTGLEYMKNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 620
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ I L +L N+ L L++N + + + S L +L++A N+I ++ + L +
Sbjct: 621 NQIEDITPLSSLKNVQWLNLADNHIKDVTVIGSMLDLLSLNLAGNEIRDVRPLIQLGQ 678
>gi|163788952|ref|ZP_02183397.1| leucine-rich protein [Flavobacteriales bacterium ALC-1]
gi|159876189|gb|EDP70248.1| leucine-rich protein [Flavobacteriales bacterium ALC-1]
Length = 205
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 88/137 (64%)
Query: 92 QLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKV 151
+L + NLD INLE LDLS N I +I+ LD L NL+ L L N ISKIEN+D+L KL+
Sbjct: 53 ELHRVLNLDNFINLETLDLSNNSISKIENLDKLVNLKNLNLSFNGISKIENLDNLPKLEK 112
Query: 152 LELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEA 211
L+L N I IENLD L +L L + N IS+I+NL+ L KL IL + N+++ I NL
Sbjct: 113 LDLDVNLISKIENLDELKSLNFLLIAFNSISKIENLSQLKKLKILHIYENQIKKIPNLSY 172
Query: 212 LTNLTQLYLSENGLTTI 228
L+ L L LS N + ++
Sbjct: 173 LSELHSLELSSNLIQSL 189
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 75/126 (59%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ +E L L N I KIEN+ L LK L L N ++ IENLD L LE LDL N I +I
Sbjct: 64 INLETLDLSNNSISKIENLDKLVNLKNLNLSFNGISKIENLDNLPKLEKLDLDVNLISKI 123
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
+ LD L +L L + N ISKIEN+ LKKLK+L + +N+I+ I NL L+ L L L
Sbjct: 124 ENLDELKSLNFLLIAFNSISKIENLSQLKKLKILHIYENQIKKIPNLSYLSELHSLELSS 183
Query: 179 NKISRI 184
N I +
Sbjct: 184 NLIQSL 189
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 82/144 (56%), Gaps = 2/144 (1%)
Query: 106 EILDLSFNR--IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE 163
EI+ L + + + LD+ NLE L L +N ISKIEN+D L LK L L N I IE
Sbjct: 43 EIIGLKIKKAELHRVLNLDNFINLETLDLSNNSISKIENLDKLVNLKNLNLSFNGISKIE 102
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
NLD L LE+L L N IS+I+NL L LN L + N + IENL L L L++ EN
Sbjct: 103 NLDNLPKLEKLDLDVNLISKIENLDELKSLNFLLIAFNSISKIENLSQLKKLKILHIYEN 162
Query: 224 GLTTIENLLSNEKLETLDVAYNKI 247
+ I NL +L +L+++ N I
Sbjct: 163 QIKKIPNLSYLSELHSLELSSNLI 186
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 82/133 (61%)
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
+ ++ N+D+ L+ L+L +N I IENLD L NL+ L L N IS+I+NL +L KL L
Sbjct: 54 LHRVLNLDNFINLETLDLSNNSISKIENLDKLVNLKNLNLSFNGISKIENLDNLPKLEKL 113
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
L N + IENL+ L +L L ++ N ++ IENL +KL+ L + N+I I N+++L
Sbjct: 114 DLDVNLISKIENLDELKSLNFLLIAFNSISKIENLSQLKKLKILHIYENQIKKIPNLSYL 173
Query: 257 TELQEFWINDNQV 269
+EL ++ N +
Sbjct: 174 SELHSLELSSNLI 186
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%)
Query: 57 KEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIR 116
K V ++ L L +N I KIEN+ L L++L+L N ++ IENLD L +L L ++FN I
Sbjct: 84 KLVNLKNLNLSFNGISKIENLDNLPKLEKLDLDVNLISKIENLDELKSLNFLLIAFNSIS 143
Query: 117 EIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIR 160
+I+ L L L+ L++ N+I KI N+ +L +L LEL N I+
Sbjct: 144 KIENLSQLKKLKILHIYENQIKKIPNLSYLSELHSLELSSNLIQ 187
>gi|16799367|ref|NP_469635.1| internalin-like protein [Listeria innocua Clip11262]
gi|16412719|emb|CAC95523.1| internalin like protein (LPXTG motif) [Listeria innocua Clip11262]
Length = 505
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 3/185 (1%)
Query: 42 SEAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDT 101
S AE ++ A + +K + +L + N I I + LT + +L+L+DNQ+T I +
Sbjct: 104 SNAEVSDISALKDLTK---LTKLEMYQNNISDINVLENLTNITDLDLHDNQITDISPVRN 160
Query: 102 LINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRI 161
L NL +L+LS+N+I +I + L+ L L N++S I V L L L LG N+I
Sbjct: 161 LTNLVVLNLSYNQISDISAVSTLSKLNDLGFTDNQVSDISAVAGLNNLSSLSLGYNQISD 220
Query: 162 IENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLS 221
I L LTNL+ L + N+IS + +A+LT L + L N++ + + LTNLT++YLS
Sbjct: 221 ISILTNLTNLDGLSIDHNQISDLTPIANLTNLTFVGLHNNQISDLTPIANLTNLTRMYLS 280
Query: 222 ENGLT 226
+T
Sbjct: 281 GQQIT 285
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 111/212 (52%), Gaps = 4/212 (1%)
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELG 155
IE + L NL L++S + +I L L L KL + N IS I +++L + L+L
Sbjct: 89 IEGIQYLTNLTELNISNAEVSDISALKDLTKLTKLEMYQNNISDINVLENLTNITDLDLH 148
Query: 156 DNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNL 215
DN+I I + LTNL L L N+IS I +++L+KLN L N++ I + L NL
Sbjct: 149 DNQITDISPVRNLTNLVVLNLSYNQISDISAVSTLSKLNDLGFTDNQVSDISAVAGLNNL 208
Query: 216 TQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV 275
+ L L N ++ I L + L+ L + +N+IS + IA+LT L +++NQ+SD +
Sbjct: 209 SSLSLGYNQISDISILTNLTNLDGLSIDHNQISDLTPIANLTNLTFVGLHNNQISDLTPI 268
Query: 276 NVLENNKQLQTIYLDRNPVAQDP-NYRRKIKL 306
L N L +YL + +P Y I +
Sbjct: 269 ANLTN---LTRMYLSGQQITNNPIPYHSNIAI 297
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 104/217 (47%), Gaps = 28/217 (12%)
Query: 66 LRWNL-IKKIENIHMLTTLKE----------------------LELYDNQLTVIENLDTL 102
LR NL I IE I LT L E LE+Y N ++ I L+ L
Sbjct: 80 LRSNLPIASIEGIQYLTNLTELNISNAEVSDISALKDLTKLTKLEMYQNNISDINVLENL 139
Query: 103 INLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII 162
N+ LDL N+I +I + +L NL L L N+IS I V L KL L DN++ I
Sbjct: 140 TNITDLDLHDNQITDISPVRNLTNLVVLNLSYNQISDISAVSTLSKLNDLGFTDNQVSDI 199
Query: 163 ENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSE 222
+ GL NL L LG N+IS I L +LT L+ LS+ N++ + + LTNLT + L
Sbjct: 200 SAVAGLNNLSSLSLGYNQISDISILTNLTNLDGLSIDHNQISDLTPIANLTNLTFVGLHN 259
Query: 223 N---GLTTIENL--LSNEKLETLDVAYNKISIIQNIA 254
N LT I NL L+ L + N I NIA
Sbjct: 260 NQISDLTPIANLTNLTRMYLSGQQITNNPIPYHSNIA 296
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L + + ++S I + L KL LE+ N I I L+ LTN+ +L
Sbjct: 86 IASIEGIQYLTNLTELNISNAEVSDISALKDLTKLTKLEMYQNNISDINVLENLTNITDL 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ I + +LT L +L+L N++ I + L+ L L ++N ++ I +
Sbjct: 146 DLHDNQITDISPVRNLTNLVVLNLSYNQISDISAVSTLSKLNDLGFTDNQVSDISAVAGL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
L +L + YN+IS I + +LT L I+ NQ+SD + L N
Sbjct: 206 NNLSSLSLGYNQISDISILTNLTNLDGLSIDHNQISDLTPIANLTN 251
>gi|293376652|ref|ZP_06622879.1| putative internalin A [Turicibacter sanguinis PC909]
gi|292644710|gb|EFF62793.1| putative internalin A [Turicibacter sanguinis PC909]
Length = 510
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 106/188 (56%)
Query: 93 LTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVL 152
+T I L+ +NL LDLS+N I+++ L L+ L LYL +N+I + + L KL+ L
Sbjct: 95 ITNITGLEECVNLVGLDLSYNDIQDLSPLASLSKLTNLYLENNQIQDLSPLASLNKLQEL 154
Query: 153 ELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEAL 212
L N IR + L L +L+ L+L N+I I +L +L+ L L+L N++ I L L
Sbjct: 155 HLSHNTIRNVSPLHQLVHLQMLHLADNEIVDISSLNTLSNLTELTLDHNQIYNISGLSNL 214
Query: 213 TNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDW 272
TNL L L N + I L + L LD++YN I II +A LT L +++ NQ++D
Sbjct: 215 TNLITLTLDRNQIEDISALATLINLNALDLSYNHIKIINALASLTRLSVLYLDYNQINDL 274
Query: 273 NTVNVLEN 280
+ ++ L N
Sbjct: 275 SALSSLIN 282
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 103/197 (52%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L +N I+ + + L+ L L L +NQ+ + L +L L+ L LS N IR + L L
Sbjct: 112 LSYNDIQDLSPLASLSKLTNLYLENNQIQDLSPLASLNKLQELHLSHNTIRNVSPLHQLV 171
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+L+ L+L N+I I +++ L L L L N+I I L LTNL L L +N+I I
Sbjct: 172 HLQMLHLADNEIVDISSLNTLSNLTELTLDHNQIYNISGLSNLTNLITLTLDRNQIEDIS 231
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
LA+L LN L L N ++ I L +LT L+ LYL N + + L S L L ++ N
Sbjct: 232 ALATLINLNALDLSYNHIKIINALASLTRLSVLYLDYNQINDLSALSSLINLTKLGLSNN 291
Query: 246 KISIIQNIAHLTELQEF 262
I I + LT+L E
Sbjct: 292 SIQDISPLMTLTKLTEL 308
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 103/186 (55%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I+ + + L L+EL L N + + L L++L++L L+ N I +I L+
Sbjct: 132 LYLENNQIQDLSPLASLNKLQELHLSHNTIRNVSPLHQLVHLQMLHLADNEIVDISSLNT 191
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L+NL +L L N+I I + +L L L L N+I I L L NL L L N I
Sbjct: 192 LSNLTELTLDHNQIYNISGLSNLTNLITLTLDRNQIEDISALATLINLNALDLSYNHIKI 251
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I+ LASLT+L++L L N++ + L +L NLT+L LS N + I L++ KL L++
Sbjct: 252 INALASLTRLSVLYLDYNQINDLSALSSLINLTKLGLSNNSIQDISPLMTLTKLTELNLM 311
Query: 244 YNKISI 249
+I++
Sbjct: 312 QQRITL 317
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 107/203 (52%), Gaps = 3/203 (1%)
Query: 72 KKIENIHML---TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
K I NI L L L+L N + + L +L L L L N+I+++ L L L+
Sbjct: 93 KGITNITGLEECVNLVGLDLSYNDIQDLSPLASLSKLTNLYLENNQIQDLSPLASLNKLQ 152
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L+L N I + + L L++L L DN+I I +L+ L+NL EL L N+I I L+
Sbjct: 153 ELHLSHNTIRNVSPLHQLVHLQMLHLADNEIVDISSLNTLSNLTELTLDHNQIYNISGLS 212
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
+LT L L+L N++ I L L NL L LS N + I L S +L L + YN+I+
Sbjct: 213 NLTNLITLTLDRNQIEDISALATLINLNALDLSYNHIKIINALASLTRLSVLYLDYNQIN 272
Query: 249 IIQNIAHLTELQEFWINDNQVSD 271
+ ++ L L + +++N + D
Sbjct: 273 DLSALSSLINLTKLGLSNNSIQD 295
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 80/165 (48%), Gaps = 22/165 (13%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N I+ + +H L L+ L L DN++ I +L+TL NL L L N+I I G
Sbjct: 151 LQELHLSHNTIRNVSPLHQLVHLQMLHLADNEIVDISSLNTLSNLTELTLDHNQIYNISG 210
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L NL L L N+I I + L L L+L N I+II L LT L LYL N+
Sbjct: 211 LSNLTNLITLTLDRNQIEDISALATLINLNALDLSYNHIKIINALASLTRLSVLYLDYNQ 270
Query: 181 ISRIDNLASL----------------------TKLNILSLQCNRL 203
I+ + L+SL TKL L+L R+
Sbjct: 271 INDLSALSSLINLTKLGLSNNSIQDISPLMTLTKLTELNLMQQRI 315
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 27/205 (13%)
Query: 109 DLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGL 168
D++ ++R G+ LYL I+ I ++ L L+L N I+ + L L
Sbjct: 75 DITKGQLRSFTGI--------LYLDHKGITNITGLEECVNLVGLDLSYNDIQDLSPLASL 126
Query: 169 TNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTI 228
+ L LYL N+I + LASL KL L L N +R + L L +L L+L++N + I
Sbjct: 127 SKLTNLYLENNQIQDLSPLASLNKLQELHLSHNTIRNVSPLHQLVHLQMLHLADNEIVDI 186
Query: 229 ENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT-------------- 274
+L + L L + +N+I I +++LT L ++ NQ+ D +
Sbjct: 187 SSLNTLSNLTELTLDHNQIYNISGLSNLTNLITLTLDRNQIEDISALATLINLNALDLSY 246
Query: 275 -----VNVLENNKQLQTIYLDRNPV 294
+N L + +L +YLD N +
Sbjct: 247 NHIKIINALASLTRLSVLYLDYNQI 271
>gi|75907715|ref|YP_322011.1| small GTP-binding protein domain-containing protein [Anabaena
variabilis ATCC 29413]
gi|75701440|gb|ABA21116.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
29413]
Length = 1107
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 122/225 (54%), Gaps = 29/225 (12%)
Query: 80 LTTLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIREI-KGLDHLANLEKLYLCSNKI 137
LT L L L+ NQ+T I E + L NL LDLS+N+I EI K + +L NL +L L NKI
Sbjct: 240 LTNLTHLILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKI 299
Query: 138 SKI-ENVDHLKKLKVLELGDNKI-RIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNI 195
++I E + +L L L+L DNKI I E + LTNL ELY NKI++I
Sbjct: 300 TEIPEAIANLTNLTQLDLSDNKITEIPETIANLTNLTELYFNYNKITQI----------- 348
Query: 196 LSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN-EKLETLDVAYNKIS-IIQNI 253
E + LTNLT+L+LS N +T I ++N L L + YNKI+ I + I
Sbjct: 349 ----------AEAIAKLTNLTELHLSSNQITQIPEAIANLTNLTELYLNYNKITQIAEAI 398
Query: 254 AHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDP 298
A LT L E ++ NQ++ LE+ +L+ + L NP+ P
Sbjct: 399 AKLTNLTELHLDGNQITQ--IPEALESLPKLEKLDLRGNPLPISP 441
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 141/268 (52%), Gaps = 33/268 (12%)
Query: 62 ERLLLRWNLIKKIENIHMLTTLKELELYDNQLT-VIENLDTLINLEILDLSFNRIREI-K 119
E +L+R + + E I LT L L L+ NQ+T E + L NL LDLS N+I EI +
Sbjct: 107 ELILIRVEITEIPEAIANLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIPE 166
Query: 120 GLDHLANLEKLYLCSNKISKI-ENVDHLKKLKVLELGDNKI-RIIENLDGLTNLEELYLG 177
+ +L NL L L SN+I++I E + +L L L+LGDN+I I + + LTNL +L LG
Sbjct: 167 AIANLTNLTHLILFSNQITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLG 226
Query: 178 KNKISRI------------------------DNLASLTKLNILSLQCNRLRTIENLEA-L 212
N+I+ I + +A+LT L L L N++ I A L
Sbjct: 227 DNQITEIPKAIANLTNLTHLILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKAIANL 286
Query: 213 TNLTQLYLSENGLTTIENLLSN-EKLETLDVAYNKIS-IIQNIAHLTELQEFWINDNQVS 270
TNLTQL LS+N +T I ++N L LD++ NKI+ I + IA+LT L E + N N+++
Sbjct: 287 TNLTQLVLSDNKITEIPEAIANLTNLTQLDLSDNKITEIPETIANLTNLTELYFNYNKIT 346
Query: 271 DWNTVNVLENNKQLQTIYLDRNPVAQDP 298
+ L ++L N + Q P
Sbjct: 347 Q--IAEAIAKLTNLTELHLSSNQITQIP 372
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 94/194 (48%), Gaps = 35/194 (18%)
Query: 108 LDLSFNRIREIKG-LDHLANLEKLYLCSNKISKIENVD--HLKKLKVLELGDNKIRIIEN 164
LDLS + E+ G + L LE L L ++ E V +LKK+ G+N +
Sbjct: 21 LDLSGQELTELPGEIGKLQQLESLIL-GKQVGGYEWVGDRYLKKVS----GNNLKTLPLE 75
Query: 165 LDGLTNLEELYLGKNKISRIDNL------------------------ASLTKLNILSLQC 200
L GL NL +L + N + RI +L A+LT L L L
Sbjct: 76 LLGLPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEAIANLTNLTHLILFS 135
Query: 201 NRL-RTIENLEALTNLTQLYLSENGLTTIENLLSN-EKLETLDVAYNKIS-IIQNIAHLT 257
N++ T E + LTNLTQL LS+N +T I ++N L L + N+I+ I + IA+LT
Sbjct: 136 NQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIANLT 195
Query: 258 ELQEFWINDNQVSD 271
L + + DNQ+++
Sbjct: 196 NLTQLDLGDNQITE 209
>gi|347549464|ref|YP_004855792.1| internalin peptidoglycan linked protein [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346982535|emb|CBW86538.1| Internalin, putative peptidoglycan linked protein (LPXTG motif)
[Listeria ivanovii subsp. ivanovii PAM 55]
Length = 558
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 135/237 (56%), Gaps = 3/237 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
+ IE + L L + + ++ + L L ++ + L++N+I++I L ++ +LE L
Sbjct: 84 VDTIEGMQYLNNLTFIVFNKDNISDLSPLAGLTKMKHIMLAYNKIKDISPLANMTDLEYL 143
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+ N+IS I ++ +L KL +EL +N+I I L LT+++ L L N+IS I + +L
Sbjct: 144 SIPGNQISDISSLLNLTKLNHVELENNQISDISVLANLTDIDYLTLATNQISDISAVGNL 203
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
TKL L+ + N+++ I L LTNL L +S+N ++ + L + +++ LD+ +N+IS +
Sbjct: 204 TKLTYLTARKNKIKDISALANLTNLGLLNVSKNQISEVSALSNLKEITILDIDHNQISDV 263
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLV 307
IA + +L+ I+DNQ++D + + L QL ++ + N + + K +L+
Sbjct: 264 SPIASMDKLRNLVISDNQITDASPLASLP---QLTSLVMSNNQITDISAFGGKNQLI 317
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 111/199 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ ++L +N IK I + +T L+ L + NQ++ I +L L L ++L N+I +I
Sbjct: 118 MKHIMLAYNKIKDISPLANMTDLEYLSIPGNQISDISSLLNLTKLNHVELENNQISDISV 177
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L +++ L L +N+IS I V +L KL L NKI+ I L LTNL L + KN+
Sbjct: 178 LANLTDIDYLTLATNQISDISAVGNLTKLTYLTARKNKIKDISALANLTNLGLLNVSKNQ 237
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS + L++L ++ IL + N++ + + ++ L L +S+N +T L S +L +L
Sbjct: 238 ISEVSALSNLKEITILDIDHNQISDVSPIASMDKLRNLVISDNQITDASPLASLPQLTSL 297
Query: 241 DVAYNKISIIQNIAHLTEL 259
++ N+I+ I +L
Sbjct: 298 VMSNNQITDISAFGGKNQL 316
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 126/241 (52%), Gaps = 17/241 (7%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIEN-LDTLINLEILDLSFNR 114
SK+ I ++ NL ++I+ KEL V +N LDT I +S +
Sbjct: 37 SKDEAINKIFPNANLAEEIK--------KELGKTSVTDVVTQNELDT-----ITSISGSG 83
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
+ I+G+ +L NL + + IS + + L K+K + L NKI+ I L +T+LE L
Sbjct: 84 VDTIEGMQYLNNLTFIVFNKDNISDLSPLAGLTKMKHIMLAYNKIKDISPLANMTDLEYL 143
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+ N+IS I +L +LTKLN + L+ N++ I L LT++ L L+ N ++ I + +
Sbjct: 144 SIPGNQISDISSLLNLTKLNHVELENNQISDISVLANLTDIDYLTLATNQISDISAVGNL 203
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL L NKI I +A+LT L ++ NQ+S+ V+ L N K++ + +D N +
Sbjct: 204 TKLTYLTARKNKIKDISALANLTNLGLLNVSKNQISE---VSALSNLKEITILDIDHNQI 260
Query: 295 A 295
+
Sbjct: 261 S 261
>gi|380024991|ref|XP_003696267.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
protein 49-like [Apis florea]
Length = 960
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 121/221 (54%), Gaps = 22/221 (9%)
Query: 20 LNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKE-VCIER--------------- 63
N+E + N ++L E T + +E E++ + +C++R
Sbjct: 72 FNIEYDKVDGSNSVNLQWTSEGKTVMATRTASEKEKNPDRICLDRRGLTSFPNIIGEPRL 131
Query: 64 --LLLRWNLIKKIENIHML--TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
L L+ NL+ KIEN + L T L L+LYDNQ+ I N + L NL +L + NRI+ I+
Sbjct: 132 RLLSLQHNLLTKIENCNFLQLTKLVFLDLYDNQIERICNFEILENLRVLLIGKNRIKRIE 191
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLD--GLTNLEELYLG 177
GL+HL+ LE L L N+I +I ++++L LKVL L N I+II + D GLT+L+EL L
Sbjct: 192 GLNHLSKLEVLDLHGNQIVQISDLNNLISLKVLNLAGNNIKIIGHNDFQGLTSLKELNLR 251
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
+NKI ++ + +L L L N + IE++ +L QL
Sbjct: 252 RNKIKKLLGFDEIQQLQKLYLSNNDIYKIEDIGSLAKALQL 292
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 10/192 (5%)
Query: 119 KGLDHLAN------LEKLYLCSNKISKIENVDHLK--KLKVLELGDNKIRIIENLDGLTN 170
+GL N L L L N ++KIEN + L+ KL L+L DN+I I N + L N
Sbjct: 117 RGLTSFPNIIGEPRLRLLSLQHNLLTKIENCNFLQLTKLVFLDLYDNQIERICNFEILEN 176
Query: 171 LEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIEN 230
L L +GKN+I RI+ L L+KL +L L N++ I +L L +L L L+ N + I +
Sbjct: 177 LRVLLIGKNRIKRIEGLNHLSKLEVLDLHGNQIVQISDLNNLISLKVLNLAGNNIKIIGH 236
Query: 231 --LLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIY 288
L+ L++ NKI + + +LQ+ ++++N + + L QL+ I
Sbjct: 237 NDFQGLTSLKELNLRRNKIKKLLGFDEIQQLQKLYLSNNDIYKIEDIGSLAKALQLREIT 296
Query: 289 LDRNPVAQDPNY 300
+D NP+ + +Y
Sbjct: 297 IDGNPITLNGDY 308
>gi|47096525|ref|ZP_00234116.1| internalin E [Listeria monocytogenes str. 1/2a F6854]
gi|254913501|ref|ZP_05263513.1| internalin E [Listeria monocytogenes J2818]
gi|254937918|ref|ZP_05269615.1| internalin E [Listeria monocytogenes F6900]
gi|386045908|ref|YP_005964240.1| internalin E [Listeria monocytogenes J0161]
gi|47015116|gb|EAL06058.1| internalin E [Listeria monocytogenes str. 1/2a F6854]
gi|258610527|gb|EEW23135.1| internalin E [Listeria monocytogenes F6900]
gi|293591509|gb|EFF99843.1| internalin E [Listeria monocytogenes J2818]
gi|345532899|gb|AEO02340.1| internalin E [Listeria monocytogenes J0161]
Length = 499
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 115/225 (51%), Gaps = 12/225 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I IE + LT L ELEL DNQ+T + L L + L+LS N ++++
Sbjct: 75 SVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELELSGNPLKDVS 134
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL+ + L I+ + + L L+VL L N+I I L GL+NL+ L G
Sbjct: 135 ALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGST 194
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL-------- 231
++S + LA+L+KL L+ +++ + L L+NLT++YL EN ++ + L
Sbjct: 195 QVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSI 254
Query: 232 --LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L+N+ + V Y I+ N+ +T L I + +SD T
Sbjct: 255 VTLTNQTITNQPVFYQNKPIVPNV--VTGLSGELIAPDTISDNGT 297
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 103/198 (52%), Gaps = 4/198 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+GL +L NL +L L N+++ + + +L K+ LEL N ++ + L GL NL+ +
Sbjct: 86 ITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELELSGNPLKDVSALAGLKNLKTM 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L I+ + LA L+ L +L+L N++ I L L+NL L ++ + L +
Sbjct: 146 DLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL TL+ +K+S + + L+ L E ++ +NQ+SD + + L N L + L +
Sbjct: 206 SKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPN---LSIVTLTNQTI 262
Query: 295 AQDPNYRRKIKLVCPWIV 312
P + + K + P +V
Sbjct: 263 TNQPVFYQN-KPIVPNVV 279
>gi|12054727|emb|CAC20606.1| internalin B [Listeria ivanovii]
Length = 1078
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 119/224 (53%), Gaps = 3/224 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L+ L+++ NQ+ I +L +LI LE + L+ N+I +I L +L+ L L
Sbjct: 86 IKSIKGVQYLSNLRKIFFQKNQIKDISDLASLIKLEEVRLNGNQISDISALANLSKLNVL 145
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L +N+I I+ + +L KLK L L DN++ I L+ LT L+EL+ N+I+ I L+ L
Sbjct: 146 DLSNNQIKDIDALSNLVKLKSLNLDDNQLTDISRLESLTALKELFFTGNQITDIRVLSKL 205
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T L L N++ I L LTNLT L EN + I L+ KL TL + N++ I
Sbjct: 206 TNLTELVFNKNQVTNIAALSKLTNLTALGFRENNVKDIAPLVKLVKLTTLAFSQNQVKDI 265
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
+ L L + NQV D ++VL L + D N V
Sbjct: 266 SVLETLDILVYLAFDGNQVKD---ISVLAKLNHLAYLVFDDNQV 306
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ ++ + N IK I ++ L L+E+ L NQ++ I L L L +LDLS N+I++I
Sbjct: 98 LRKIFFQKNQIKDISDLASLIKLEEVRLNGNQISDISALANLSKLNVLDLSNNQIKDIDA 157
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L L+ L L N+++ I ++ L LK L N+I I L LTNL EL KN+
Sbjct: 158 LSNLVKLKSLNLDDNQLTDISRLESLTALKELFFTGNQITDIRVLSKLTNLTELVFNKNQ 217
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
++ I L+ LT L L + N ++ I L L LT L S+N + I L + + L L
Sbjct: 218 VTNIAALSKLTNLTALGFRENNVKDIAPLVKLVKLTTLAFSQNQVKDISVLETLDILVYL 277
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
N++ I +A L L +DNQV++ + + L N
Sbjct: 278 AFDGNQVKDISVLAKLNHLAYLVFDDNQVTNIDALAKLPN 317
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 112/224 (50%), Gaps = 3/224 (1%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N IK I+ + L LK L L DNQLT I L++L L+ L + N+I +I+ L L NL
Sbjct: 150 NQIKDIDALSNLVKLKSLNLDDNQLTDISRLESLTALKELFFTGNQITDIRVLSKLTNLT 209
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L N+++ I + L L L +N ++ I L L L L +N++ I L
Sbjct: 210 ELVFNKNQVTNIAALSKLTNLTALGFRENNVKDIAPLVKLVKLTTLAFSQNQVKDISVLE 269
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
+L L L+ N+++ I L L +L L +N +T I+ L L + N++
Sbjct: 270 TLDILVYLAFDGNQVKDISVLAKLNHLAYLVFDDNQVTNIDALAKLPNLIGVMFNDNRVR 329
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
+ +A+LT+L++ N + D V L + +L+ + LDRN
Sbjct: 330 NMSPLANLTKLEKLHAEGNYIQD---VKALSSLTKLKELKLDRN 370
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%)
Query: 74 IENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLC 133
I + LT LKEL NQ+T I L L NL L + N++ I L L NL L
Sbjct: 177 ISRLESLTALKELFFTGNQITDIRVLSKLTNLTELVFNKNQVTNIAALSKLTNLTALGFR 236
Query: 134 SNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKL 193
N + I + L KL L N+++ I L+ L L L N++ I LA L L
Sbjct: 237 ENNVKDIAPLVKLVKLTTLAFSQNQVKDISVLETLDILVYLAFDGNQVKDISVLAKLNHL 296
Query: 194 NILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNI 253
L N++ I+ L L NL + ++N + + L + KLE L N I ++ +
Sbjct: 297 AYLVFDDNQVTNIDALAKLPNLIGVMFNDNRVRNMSPLANLTKLEKLHAEGNYIQDVKAL 356
Query: 254 AHLTELQEFWINDNQVSDWNTVNVLEN 280
+ LT+L+E ++ N + D + + L N
Sbjct: 357 SSLTKLKELKLDRNCIVDISPLAGLNN 383
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ +E + L N I I + L+ L L+L +NQ+ I+ L L+ L+ L+L N++ +I
Sbjct: 118 IKLEEVRLNGNQISDISALANLSKLNVLDLSNNQIKDIDALSNLVKLKSLNLDDNQLTDI 177
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L+ L L++L+ N+I+ I + L L L N++ I L LTNL L +
Sbjct: 178 SRLESLTALKELFFTGNQITDIRVLSKLTNLTELVFNKNQVTNIAALSKLTNLTALGFRE 237
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N + I L L KL L+ N+++ I LE L L L N + I L L
Sbjct: 238 NNVKDIAPLVKLVKLTTLAFSQNQVKDISVLETLDILVYLAFDGNQVKDISVLAKLNHLA 297
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQV 269
L N+++ I +A L L NDN+V
Sbjct: 298 YLVFDDNQVTNIDALAKLPNLIGVMFNDNRV 328
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK + L+ N + I + LT L L +N + I L L+ L L S N++
Sbjct: 203 SKLTNLTELVFNKNQVTNIAALSKLTNLTALGFRENNVKDIAPLVKLVKLTTLAFSQNQV 262
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++I L+ L L L N++ I + L L L DN++ I+ L L NL +
Sbjct: 263 KDISVLETLDILVYLAFDGNQVKDISVLAKLNHLAYLVFDDNQVTNIDALAKLPNLIGVM 322
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
N++ + LA+LTKL L + N ++ ++ L +LT L +L L N + I L
Sbjct: 323 FNDNRVRNMSPLANLTKLEKLHAEGNYIQDVKALSSLTKLKELKLDRNCIVDISPLAGLN 382
Query: 236 KLETLDVA 243
L+ L+++
Sbjct: 383 NLDELELS 390
>gi|28210240|ref|NP_781184.1| internalin A-like protein/ S-layer protein [Clostridium tetani E88]
gi|28202676|gb|AAO35121.1| internalin A-like protein/putative S-layer protein [Clostridium
tetani E88]
Length = 706
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 117/198 (59%)
Query: 54 EESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFN 113
E+S I L +R IK IE I LT L+ ++ +N++ + + +L ++ S+N
Sbjct: 86 EKSDLSNISELDIRNKAIKSIEGIQYLTGLQTIDAANNKIHDLSPISDCTSLSKINFSYN 145
Query: 114 RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEE 173
+I +I L +L LEK+YL N+I +I+ ++ LK+LK L+L N+I+ +++L L NL+
Sbjct: 146 KIEDISTLKNLTILEKVYLKDNEIKRIDALEDLKELKELDLSSNEIKNLKSLTYLNNLKT 205
Query: 174 LYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLS 233
L + N + ID+L SL KL L+L N + I ++ + NLT+LY+ +N + + L+
Sbjct: 206 LTMADNGLKNIDDLGSLEKLESLTLSKNNISDISAIKVIRNLTKLYIDDNQVEDVYPLVG 265
Query: 234 NEKLETLDVAYNKISIIQ 251
+ LE +++ NKI I+
Sbjct: 266 MDYLERINLDKNKIKNIE 283
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 145/256 (56%), Gaps = 34/256 (13%)
Query: 66 LRW-NLIKKIENIHMLTTLKELE------LYDNQLTVIENLDTLINLEILDLSFNRIREI 118
LRW NL K NI ++ LK+LE LY +++ I L L NL+ L ++ + E+
Sbjct: 371 LRWVNLGK--NNIRDISPLKDLEDLEGLYLYKTKVSDITPLQGLENLKKLQITATNLSEL 428
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L +L NLE+L L NKI ++E++ L KL+VL+L DN I+ I +L LT+++EL L K
Sbjct: 429 HPLKNLTNLERLELGENKIFEVEDLQGLIKLEVLDLSDNYIKDISSLKNLTDIKELKLNK 488
Query: 179 NKISRIDNLASLTKL--------NILSLQC--------------NRLRTIENLEALTNLT 216
NK+S I +A++ L NI +L+ N++ + E LE L ++
Sbjct: 489 NKVSDISIVANMKNLQRLYINDNNITTLKYLKDAKDLVWLTANNNKITSFEGLENLLDIK 548
Query: 217 QLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN 276
++++ N ++ ++ L + ++LETL N IS ++ I +L ++ ++ +N++SD ++
Sbjct: 549 EIHVDNNKISKLDPLKNLKELETLSARTNVISDLKPIENLDYIKNLYLYENKISD---IS 605
Query: 277 VLENNKQLQTIYLDRN 292
L+N + +YLD+N
Sbjct: 606 PLKNMTGMLRLYLDKN 621
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 128/235 (54%), Gaps = 25/235 (10%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKI-- 140
+KEL L+ + I ++ L L ++L N IR+I L L +LE LYL K+S I
Sbjct: 349 IKELNLFAKNIKDISGMEYLRGLRWVNLGKNNIRDISPLKDLEDLEGLYLYKTKVSDITP 408
Query: 141 -ENVDHLKKLKV-------------------LELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ +++LKKL++ LELG+NKI +E+L GL LE L L N
Sbjct: 409 LQGLENLKKLQITATNLSELHPLKNLTNLERLELGENKIFEVEDLQGLIKLEVLDLSDNY 468
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I I +L +LT + L L N++ I + + NL +LY+++N +TT++ L + L L
Sbjct: 469 IKDISSLKNLTDIKELKLNKNKVSDISIVANMKNLQRLYINDNNITTLKYLKDAKDLVWL 528
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
NKI+ + + +L +++E +++N++S ++ L+N K+L+T+ N ++
Sbjct: 529 TANNNKITSFEGLENLLDIKEIHVDNNKIS---KLDPLKNLKELETLSARTNVIS 580
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 120/223 (53%), Gaps = 22/223 (9%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
LT L+ LEL +N++ +E+L LI LE+LDLS N I++I L +L ++++L L NK+S
Sbjct: 434 LTNLERLELGENKIFEVEDLQGLIKLEVLDLSDNYIKDISSLKNLTDIKELKLNKNKVSD 493
Query: 140 IENVDHLKKLKVLELGDN----------------------KIRIIENLDGLTNLEELYLG 177
I V ++K L+ L + DN KI E L+ L +++E+++
Sbjct: 494 ISIVANMKNLQRLYINDNNITTLKYLKDAKDLVWLTANNNKITSFEGLENLLDIKEIHVD 553
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
NKIS++D L +L +L LS + N + ++ +E L + LYL EN ++ I L + +
Sbjct: 554 NNKISKLDPLKNLKELETLSARTNVISDLKPIENLDYIKNLYLYENKISDISPLKNMTGM 613
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
L + N I I ++++ ++ + DN + + V LE+
Sbjct: 614 LRLYLDKNNIKDISVVSNMKDVTTLSLGDNNIINIAPVAGLED 656
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 25/193 (12%)
Query: 102 LINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRI 161
L N+ LD+ I+ I+G+ +L L+ + +NKI + + L + NKI
Sbjct: 90 LSNISELDIRNKAIKSIEGIQYLTGLQTIDAANNKIHDLSPISDCTSLSKINFSYNKIED 149
Query: 162 IENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLS 221
I L LT LE++YL N+I RID L L +L L L N ++ +++L L NL L ++
Sbjct: 150 ISTLKNLTILEKVYLKDNEIKRIDALEDLKELKELDLSSNEIKNLKSLTYLNNLKTLTMA 209
Query: 222 ENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENN 281
+NGL I++L S EKLE+L ++ N +SD + + V+ N
Sbjct: 210 DNGLKNIDDLGSLEKLESLTLS----------------------KNNISDISAIKVIRN- 246
Query: 282 KQLQTIYLDRNPV 294
L +Y+D N V
Sbjct: 247 --LTKLYIDDNQV 257
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 126/231 (54%), Gaps = 8/231 (3%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I+ L L N + I + + L+ L + DN +T ++ L +L L + N+I +G
Sbjct: 481 IKELKLNKNKVSDISIVANMKNLQRLYINDNNITTLKYLKDAKDLVWLTANNNKITSFEG 540
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKI---RIIENLDGLTNLEELYLG 177
L++L +++++++ +NKISK++ + +LK+L+ L N I + IENLD + NL YL
Sbjct: 541 LENLLDIKEIHVDNNKISKLDPLKNLKELETLSARTNVISDLKPIENLDYIKNL---YLY 597
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
+NKIS I L ++T + L L N ++ I + + ++T L L +N + I + E L
Sbjct: 598 ENKISDISPLKNMTGMLRLYLDKNNIKDISVVSNMKDVTTLSLGDNNIINIAPVAGLEDL 657
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIY 288
TLD+ N I I + +L L++ + +N + +N L +K ++ +Y
Sbjct: 658 ATLDIGDNDIKDITVLYNLPSLEKLVVTNNDNLPKHQINAL--SKDVKVVY 706
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 39/282 (13%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N IK ++++ L LK L + DN L I++L +L LE L LS N I +I
Sbjct: 181 LKELDLSSNEIKNLKSLTYLNNLKTLTMADNGLKNIDDLGSLEKLESLTLSKNNISDISA 240
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG------------- 167
+ + NL KLY+ N++ + + + L+ + L NKI+ IE L+
Sbjct: 241 IKVIRNLTKLYIDDNQVEDVYPLVGMDYLERINLDKNKIKNIEELEANKDNLKWVKYRGK 300
Query: 168 -----------------LTNLEELYLGKNKISRIDN------LASLTKLNILSLQCNRLR 204
+ N ++ L + +I+ LA + + L+L ++
Sbjct: 301 EITDIGTLKYIVEQANVVVNFKDKNLEREVRKKIEKPLGELRLADVEYIKELNLFAKNIK 360
Query: 205 TIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWI 264
I +E L L + L +N + I L E LE L + K+S I + L L++ I
Sbjct: 361 DISGMEYLRGLRWVNLGKNNIRDISPLKDLEDLEGLYLYKTKVSDITPLQGLENLKKLQI 420
Query: 265 NDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKL 306
+S+ + + L N L+ + L N + + + + IKL
Sbjct: 421 TATNLSELHPLKNLTN---LERLELGENKIFEVEDLQGLIKL 459
>gi|47091492|ref|ZP_00229289.1| internalin [Listeria monocytogenes str. 4b H7858]
gi|417314397|ref|ZP_12101097.1| internalin A [Listeria monocytogenes J1816]
gi|47020169|gb|EAL10905.1| internalin [Listeria monocytogenes str. 4b H7858]
gi|328467803|gb|EGF38849.1| internalin A [Listeria monocytogenes J1816]
Length = 589
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 117/201 (58%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L T+ L L ++ +E ++ L NL L L+ N++ +I L L NL L L N IS
Sbjct: 70 LDTINSLTLTSKGISSLEGMNYLTNLGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISD 129
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I + +LK L+ L++ D ++ I L GLTNL+ L L N++ + + SL +L L++
Sbjct: 130 ISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLRSLNVS 189
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N+L ++ L+AL+NL+ LY +EN + ++ L + L LD++ N+I +A LT++
Sbjct: 190 NNKLTNLDELQALSNLSVLYANENQINNLQGLSNLNNLFLLDLSANQIVDTTPLAGLTKV 249
Query: 260 QEFWINDNQVSDWNTVNVLEN 280
Q ++++NQ+SD ++ L N
Sbjct: 250 QTLYVSNNQISDVTGISSLIN 270
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 112/199 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+L N + I + LT L L+L N ++ I L L NL+ LD++ ++ +I
Sbjct: 95 LGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITP 154
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L +N++ + V+ L +L+ L + +NK+ ++ L L+NL LY +N+
Sbjct: 155 LSGLTNLKGLGLYNNQLENLSGVNSLHQLRSLNVSNNKLTNLDELQALSNLSVLYANENQ 214
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + L++L L +L L N++ L LT + LY+S N ++ + + S L+ L
Sbjct: 215 INNLQGLSNLNNLFLLDLSANQIVDTTPLAGLTKVQTLYVSNNQISDVTGISSLINLDWL 274
Query: 241 DVAYNKISIIQNIAHLTEL 259
D++ NKIS I+ + LT+L
Sbjct: 275 DISQNKISNIRPLNSLTKL 293
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%)
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
IS+I D L LG + + L + L L IS ++ + LT L L
Sbjct: 39 ISQIFPDDALATEIQTTLGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYLTNLGTL 98
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
L N++ I L+ LTNLT L LS N ++ I L + + L+ LD+ +++ I ++ L
Sbjct: 99 ILTGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGL 158
Query: 257 TELQEFWINDNQVSDWNTVNVLENNKQL 284
T L+ + +NQ+ + + VN L + L
Sbjct: 159 TNLKGLGLYNNQLENLSGVNSLHQLRSL 186
>gi|423626307|ref|ZP_17602084.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VD148]
gi|401252861|gb|EJR59112.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus VD148]
Length = 943
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 129/228 (56%), Gaps = 4/228 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L + +T I + L +L+ +DL+ N I+ I ++ L N+ L
Sbjct: 231 INEIAGLEHMTNLEKLTLRGSNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLENINML 290
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKIS + + +KK+K L+L N I I+ L L+ +++LYL N+IS + + L
Sbjct: 291 FLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQL 350
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ + +L + N++ +E++ ++NL +L ++++ + I L KL+ L++ N IS I
Sbjct: 351 SNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDI 410
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPV 294
+++LT+L E + N+++D V L + Q Q I+LD V
Sbjct: 411 SPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQKIFLDEASV 458
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 103/182 (56%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N IK I I L + L L DN+++ + L + ++ LDL N I +I+ L L+
Sbjct: 270 LTSNPIKNIHPIEQLENINMLFLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLS 329
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+++LYL +N+IS + ++ L +++L +G+NKI +E++ ++NL EL + ++I I
Sbjct: 330 TMKQLYLANNQISDLTGINQLSNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDIS 389
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L+ L KL +L+L+ N + I L LT+L ++ L N + + + K ++D+
Sbjct: 390 PLSKLGKLQVLNLEENYISDISPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQ 449
Query: 246 KI 247
KI
Sbjct: 450 KI 451
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 105/188 (55%), Gaps = 9/188 (4%)
Query: 111 SFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTN 170
S I EI GL+H+ NLEKL L + ++ I + L+ LK ++L N I+ I ++ L N
Sbjct: 227 SGEGINEIAGLEHMTNLEKLTLRGSNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLEN 286
Query: 171 LEELYLGKNKISRIDNLASLTKL---NILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
+ L+L NKIS +L L+K+ L L N + I+ L L+ + QLYL+ N ++
Sbjct: 287 INMLFLRDNKIS---DLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISD 343
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ + +E L + NKIS +++I+ ++ L E I D+++ D + ++ L +LQ +
Sbjct: 344 LTGINQLSNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKL---GKLQVL 400
Query: 288 YLDRNPVA 295
L+ N ++
Sbjct: 401 NLEENYIS 408
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 86/148 (58%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK I+ L L N I+ I+ + L+T+K+L L +NQ++ + ++ L N+E+L + N+I
Sbjct: 304 SKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQLSNVELLWIGNNKI 363
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++ + ++NL +L + ++I I + L KL+VL L +N I I L LT+L E+
Sbjct: 364 SNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDISPLSNLTDLHEMN 423
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRL 203
LG N+I+ + + L K + +Q ++
Sbjct: 424 LGANEIADVRPVEELGKRISIDIQRQKI 451
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+L ++ +
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 620
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
N+I I L L NL+ L L N I + + S+ L L+L N I ++ L L
Sbjct: 621 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNE---ICDVRPLIQLG 677
Query: 217 QLYLSENGLTTI 228
Q + + G TI
Sbjct: 678 QWFSIDVGRQTI 689
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 69/118 (58%)
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E++ +K L++L+ +I+ + L+ +TNLE L L + I+ +++L +LNI+++
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 620
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ I L +L NL L L++N + + + S L +L++A N+I ++ + L +
Sbjct: 621 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNEICDVRPLIQLGQ 678
>gi|347548625|ref|YP_004854953.1| putative internalin B [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346981696|emb|CBW85667.1| Putative internalin B (ivanovii) [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 1107
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 119/224 (53%), Gaps = 3/224 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
IK I+ + L+ L+++ NQ+ I +L +LI LE + L+ N+I +I L +L+ L L
Sbjct: 86 IKSIKGVQYLSNLRKIFFQKNQIKDISDLASLIKLEEVRLNGNQISDISALANLSKLNVL 145
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L +N+I I+ + +L KLK L L DN++ I L+ LT L+EL+ N+I+ I L+ L
Sbjct: 146 DLSNNQIKDIDALSNLVKLKSLNLDDNQLTDISKLESLTALKELFFTGNQITDIRVLSKL 205
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T L L N++ I L LTNLT L EN + I L+ KL TL + N++ I
Sbjct: 206 TNLTELVFNKNQVTNIAALSKLTNLTALGFRENNVKDIAPLVKLVKLTTLAFSQNQVKDI 265
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
+ L L + NQV D ++VL L + D N V
Sbjct: 266 SVLETLDILVYLAFDGNQVKD---ISVLAKLNHLAYLVFDDNQV 306
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 115/220 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ ++ + N IK I ++ L L+E+ L NQ++ I L L L +LDLS N+I++I
Sbjct: 98 LRKIFFQKNQIKDISDLASLIKLEEVRLNGNQISDISALANLSKLNVLDLSNNQIKDIDA 157
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L L+ L L N+++ I ++ L LK L N+I I L LTNL EL KN+
Sbjct: 158 LSNLVKLKSLNLDDNQLTDISKLESLTALKELFFTGNQITDIRVLSKLTNLTELVFNKNQ 217
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
++ I L+ LT L L + N ++ I L L LT L S+N + I L + + L L
Sbjct: 218 VTNIAALSKLTNLTALGFRENNVKDIAPLVKLVKLTTLAFSQNQVKDISVLETLDILVYL 277
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
N++ I +A L L +DNQV++ + + L N
Sbjct: 278 AFDGNQVKDISVLAKLNHLAYLVFDDNQVTNIDALAKLPN 317
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 112/224 (50%), Gaps = 3/224 (1%)
Query: 69 NLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
N IK I+ + L LK L L DNQLT I L++L L+ L + N+I +I+ L L NL
Sbjct: 150 NQIKDIDALSNLVKLKSLNLDDNQLTDISKLESLTALKELFFTGNQITDIRVLSKLTNLT 209
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
+L N+++ I + L L L +N ++ I L L L L +N++ I L
Sbjct: 210 ELVFNKNQVTNIAALSKLTNLTALGFRENNVKDIAPLVKLVKLTTLAFSQNQVKDISVLE 269
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
+L L L+ N+++ I L L +L L +N +T I+ L L + N++
Sbjct: 270 TLDILVYLAFDGNQVKDISVLAKLNHLAYLVFDDNQVTNIDALAKLPNLIGVMFNDNRVR 329
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
+ +A+LT+L++ N + D V L + +L+ + LDRN
Sbjct: 330 NMSPLANLTKLEKLHAEGNYIQD---VKALSSLTKLKELKLDRN 370
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 97/207 (46%)
Query: 74 IENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLC 133
I + LT LKEL NQ+T I L L NL L + N++ I L L NL L
Sbjct: 177 ISKLESLTALKELFFTGNQITDIRVLSKLTNLTELVFNKNQVTNIAALSKLTNLTALGFR 236
Query: 134 SNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKL 193
N + I + L KL L N+++ I L+ L L L N++ I LA L L
Sbjct: 237 ENNVKDIAPLVKLVKLTTLAFSQNQVKDISVLETLDILVYLAFDGNQVKDISVLAKLNHL 296
Query: 194 NILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNI 253
L N++ I+ L L NL + ++N + + L + KLE L N I ++ +
Sbjct: 297 AYLVFDDNQVTNIDALAKLPNLIGVMFNDNRVRNMSPLANLTKLEKLHAEGNYIQDVKAL 356
Query: 254 AHLTELQEFWINDNQVSDWNTVNVLEN 280
+ LT+L+E ++ N + D + + L N
Sbjct: 357 SSLTKLKELKLDRNCIVDISPLAGLNN 383
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ +E + L N I I + L+ L L+L +NQ+ I+ L L+ L+ L+L N++ +I
Sbjct: 118 IKLEEVRLNGNQISDISALANLSKLNVLDLSNNQIKDIDALSNLVKLKSLNLDDNQLTDI 177
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L+ L L++L+ N+I+ I + L L L N++ I L LTNL L +
Sbjct: 178 SKLESLTALKELFFTGNQITDIRVLSKLTNLTELVFNKNQVTNIAALSKLTNLTALGFRE 237
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N + I L L KL L+ N+++ I LE L L L N + I L L
Sbjct: 238 NNVKDIAPLVKLVKLTTLAFSQNQVKDISVLETLDILVYLAFDGNQVKDISVLAKLNHLA 297
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQV 269
L N+++ I +A L L NDN+V
Sbjct: 298 YLVFDDNQVTNIDALAKLPNLIGVMFNDNRV 328
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK + L+ N + I + LT L L +N + I L L+ L L S N++
Sbjct: 203 SKLTNLTELVFNKNQVTNIAALSKLTNLTALGFRENNVKDIAPLVKLVKLTTLAFSQNQV 262
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++I L+ L L L N++ I + L L L DN++ I+ L L NL +
Sbjct: 263 KDISVLETLDILVYLAFDGNQVKDISVLAKLNHLAYLVFDDNQVTNIDALAKLPNLIGVM 322
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
N++ + LA+LTKL L + N ++ ++ L +LT L +L L N + I L
Sbjct: 323 FNDNRVRNMSPLANLTKLEKLHAEGNYIQDVKALSSLTKLKELKLDRNCIVDISPLAGLN 382
Query: 236 KLETLDVA 243
L+ L+++
Sbjct: 383 NLDELELS 390
>gi|153954698|ref|YP_001395463.1| hypothetical protein CKL_2080 [Clostridium kluyveri DSM 555]
gi|219855167|ref|YP_002472289.1| hypothetical protein CKR_1824 [Clostridium kluyveri NBRC 12016]
gi|146347556|gb|EDK34092.1| Hypothetical protein CKL_2080 [Clostridium kluyveri DSM 555]
gi|219568891|dbj|BAH06875.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 369
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 127/248 (51%), Gaps = 24/248 (9%)
Query: 26 ENTHGNQMSLDNPDEESEAETTESKAEDEESKEVC--IERLLLRWNLIKKIENIHMLTTL 83
++T+ N ++ + + E E T +K + K I+ L + I+ I I LT L
Sbjct: 122 KDTNNNIVTFKDANLEQEIRTIINKPTGDIYKSDVENIKELDIELGGIQDISGIESLTNL 181
Query: 84 KELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENV 143
++L+LY N+++ I L L NL+ L+L +N+I +I L +L NL+KL L N+IS I +
Sbjct: 182 QKLDLYGNKISDITVLKDLTNLQELNLGYNKINDITTLKNLTNLQKLDLYVNQISDISAL 241
Query: 144 DHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRL 203
L LK L+L DN I I L+GL NL+ L L NKIS I L L L +S N++
Sbjct: 242 KDLTNLKTLDLEDNLISNISILEGLYNLKILDLDYNKISNISALKGLYNLQNISAYKNQI 301
Query: 204 RTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFW 263
I L+ L N L+TLD+ N+IS I + L L+ +
Sbjct: 302 SDISALKGLYN----------------------LKTLDLTDNQISDINVLKGLYNLRTLY 339
Query: 264 INDNQVSD 271
+ DNQ+SD
Sbjct: 340 LGDNQISD 347
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 105/192 (54%), Gaps = 3/192 (1%)
Query: 104 NLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE 163
N++ LD+ I++I G++ L NL+KL L NKIS I + L L+ L LG NKI I
Sbjct: 158 NIKELDIELGGIQDISGIESLTNLQKLDLYGNKISDITVLKDLTNLQELNLGYNKINDIT 217
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
L LTNL++L L N+IS I L LT L L L+ N + I LE L NL L L N
Sbjct: 218 TLKNLTNLQKLDLYVNQISDISALKDLTNLKTLDLEDNLISNISILEGLYNLKILDLDYN 277
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
++ I L L+ + N+IS I + L L+ + DNQ+SD +NVL+
Sbjct: 278 KISNISALKGLYNLQNISAYKNQISDISALKGLYNLKTLDLTDNQISD---INVLKGLYN 334
Query: 284 LQTIYLDRNPVA 295
L+T+YL N ++
Sbjct: 335 LRTLYLGDNQIS 346
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 97/179 (54%), Gaps = 5/179 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+++L L N I I + LT L+EL L N++ I L L NL+ LDL N+I +I
Sbjct: 181 LQKLDLYGNKISDITVLKDLTNLQELNLGYNKINDITTLKNLTNLQKLDLYVNQISDISA 240
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L N IS I ++ L LK+L+L NKI I L GL NL+ + KN+
Sbjct: 241 LKDLTNLKTLDLEDNLISNISILEGLYNLKILDLDYNKISNISALKGLYNLQNISAYKNQ 300
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT-----IENLLSN 234
IS I L L L L L N++ I L+ L NL LYL +N ++ ++N LSN
Sbjct: 301 ISDISALKGLYNLKTLDLTDNQISDINVLKGLYNLRTLYLGDNQISDTDKQLLQNALSN 359
>gi|156551189|ref|XP_001604735.1| PREDICTED: hypothetical protein LOC100121149 [Nasonia vitripennis]
Length = 938
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 121/230 (52%), Gaps = 32/230 (13%)
Query: 11 EVDNDNLVTLNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKE-VCIER------ 63
+ +ND + NV A++ T +E + S AE E++ + +C++R
Sbjct: 72 QAENDQVGGCNVVALQQT----------EEGKAVVASRSAAEREKNPDRICLDRRGLTTF 121
Query: 64 -----------LLLRWNLIKKIENIHM--LTTLKELELYDNQLTVIENLDTLINLEILDL 110
+ L+ NLI KIE H+ LT L L+LYDNQ+ N D+L NL +L +
Sbjct: 122 PKIIDEPKLRLISLQHNLISKIEREHLTQLTRLVFLDLYDNQIDRFCNFDSLENLRVLLM 181
Query: 111 SFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLD--GL 168
NRI++I+GL L LE L L N+I ++ ++ L LKVL L N I+II D GL
Sbjct: 182 GKNRIKKIEGLKGLTKLEVLDLHGNQIMQVSGLEELNLLKVLNLAGNNIKIIGYCDFQGL 241
Query: 169 TNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
++L+EL L +NKI ++ + +L L L N ++ IE++ ++ Q+
Sbjct: 242 SSLKELNLRRNKIKKLLGFENTPQLQKLYLSFNDIQKIEDMGSIAKALQI 291
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 10/168 (5%)
Query: 135 NKISKIE--NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTK 192
N ISKIE ++ L +L L+L DN+I N D L NL L +GKN+I +I+ L LTK
Sbjct: 138 NLISKIEREHLTQLTRLVFLDLYDNQIDRFCNFDSLENLRVLLMGKNRIKKIEGLKGLTK 197
Query: 193 LNILSLQCNRLRTIENLEALTNLTQLYLSEN-----GLTTIENLLSNEKLETLDVAYNKI 247
L +L L N++ + LE L L L L+ N G + L S L+ L++ NKI
Sbjct: 198 LEVLDLHGNQIMQVSGLEELNLLKVLNLAGNNIKIIGYCDFQGLSS---LKELNLRRNKI 254
Query: 248 SIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+ + +LQ+ +++ N + + + Q++ + +D NPV
Sbjct: 255 KKLLGFENTPQLQKLYLSFNDIQKIEDMGSIAKALQIREVTIDNNPVC 302
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 32/170 (18%)
Query: 157 NKIRIIENLDGLTNLEEL---------YLGKNKISRID--NLASLTKLNILSLQCNRLRT 205
N RI + GLT ++ L N IS+I+ +L LT+L L L N++
Sbjct: 107 NPDRICLDRRGLTTFPKIIDEPKLRLISLQHNLISKIEREHLTQLTRLVFLDLYDNQIDR 166
Query: 206 IENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWIN 265
N ++L NL L + +N + IE L KLE LD+ N+I + + L L+ +
Sbjct: 167 FCNFDSLENLRVLLMGKNRIKKIEGLKGLTKLEVLDLHGNQIMQVSGLEELNLLKVLNLA 226
Query: 266 DNQVS-----DWNTVNVL----------------ENNKQLQTIYLDRNPV 294
N + D+ ++ L EN QLQ +YL N +
Sbjct: 227 GNNIKIIGYCDFQGLSSLKELNLRRNKIKKLLGFENTPQLQKLYLSFNDI 276
>gi|449462407|ref|XP_004148932.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101214183 [Cucumis sativus]
Length = 479
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 129/237 (54%), Gaps = 2/237 (0%)
Query: 82 TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIE 141
T+ L+L L+ I L NLE LDL+FN + ++GL+ NL+ L + NK+ ++
Sbjct: 20 TITTLKLNQKALSDINGLSLFKNLEKLDLTFNNLTSLQGLESCTNLKWLSVVQNKLDNLK 79
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++ L +L VL G NK+R ++ + L L L N+I+ I L + LN L L N
Sbjct: 80 GIEGLSRLNVLNAGKNKLRSMDEIRPLVGFCALILNDNEIASICKLDQMKNLNTLVLSRN 139
Query: 202 RLRTI-ENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQN-IAHLTEL 259
+ +I ++L + ++ +L LS +IE+L +L+ L +A+N+I ++ N +AH +L
Sbjct: 140 PIHSIGDSLLKVNSMKKLSLSNCKHQSIESLKFCIELKELRLAHNEIRMLPNALAHNKKL 199
Query: 260 QEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
+ +N + W+ + VL + L+ IY+ NP+A+ +KI + P + ++A
Sbjct: 200 LNLDLGNNVIMRWSDLKVLSSLGYLRNIYVXGNPIAESAKLDKKICRLVPGLRVLNA 256
>gi|255017074|ref|ZP_05289200.1| internalin E [Listeria monocytogenes FSL F2-515]
Length = 474
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 50 SVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS 109
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL+ + L I+ + + L L+VL L N+I I L GL+NL+ L G
Sbjct: 110 ALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGST 169
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL-------- 231
++S + LA+L+KL L+ +++ + L L+NLT++YL EN ++ + L
Sbjct: 170 QVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSI 229
Query: 232 --LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L+N+ + V Y I+ N+ +T L I + +SD T
Sbjct: 230 VTLTNQTITNQPVFYQNKPIVPNV--VTGLSGELIAPDTISDNGT 272
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+GL +L NL +L L N+++ + + +L K+ L L N ++ + L GL NL+ +
Sbjct: 61 ITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTM 120
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L I+ + LA L+ L +L+L N++ I L L+NL L ++ + L +
Sbjct: 121 DLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANL 180
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL TL+ +K+S + + L+ L E ++ +NQ+SD + + L N L + L +
Sbjct: 181 SKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPN---LSIVTLTNQTI 237
Query: 295 AQDPNYRRKIKLVCPWIV 312
P + + K + P +V
Sbjct: 238 TNQPVFYQN-KPIVPNVV 254
>gi|404412362|ref|YP_006697949.1| internalin E [Listeria monocytogenes SLCC7179]
gi|404238061|emb|CBY59462.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC7179]
Length = 499
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 75 SVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS 134
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL+ + L I+ + + L L+VL L N+I I L GL+NL+ L G
Sbjct: 135 ALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGST 194
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL-------- 231
++S + LA+L+KL L+ +++ + L L+NLT++YL EN ++ + L
Sbjct: 195 QVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSI 254
Query: 232 --LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L+N+ + V Y I+ N+ +T L I + +SD T
Sbjct: 255 VTLTNQTITNQPVFYQNKPIVPNV--VTGLSGELIAPDTISDNGT 297
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+GL +L NL +L L N+++ + + +L K+ L L N ++ + L GL NL+ +
Sbjct: 86 ITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTM 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L I+ + LA L+ L +L+L N++ I L L+NL L ++ + L +
Sbjct: 146 DLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL TL+ +K+S + + L+ L E ++ +NQ+SD + + L N L + L +
Sbjct: 206 SKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPN---LSIVTLTNQTI 262
Query: 295 AQDPNYRRKIKLVCPWIV 312
P + + K + P +V
Sbjct: 263 TNQPVFYQN-KPIVPNVV 279
>gi|254444497|ref|ZP_05057973.1| Leucine Rich Repeat domain protein [Verrucomicrobiae bacterium
DG1235]
gi|198258805|gb|EDY83113.1| Leucine Rich Repeat domain protein [Verrucomicrobiae bacterium
DG1235]
Length = 1153
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 105/199 (52%), Gaps = 6/199 (3%)
Query: 104 NLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE 163
NL L L F I E+ L LANLE+L L N I+ + + L +L+VL + + +I +
Sbjct: 71 NLTELTLRFQTIEELSPLASLANLEQLDLSGNPITDLTQLGSLAQLRVLSISEAEITDLT 130
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
L L++L+ L+L KN IS + +A + L+ L + N + L +T LT L L
Sbjct: 131 PLASLSSLQWLFLSKNSISNLSPIAGIATLSYLDFEDNPIADFSPLSQITTLTTLNLRNT 190
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
G ++ L + L +LD + N +S ++ + L +LQ+F ++DN ++D + L
Sbjct: 191 GFNSLAPLAPLKSLRSLDASENLLSSLEGLNQLPQLQQFQVSDNYLTD---ITPLAEIAT 247
Query: 284 LQTIYLDRNPV---AQDPN 299
LQ I L+RN + A PN
Sbjct: 248 LQLIALNRNFIDFTAGTPN 266
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 2/187 (1%)
Query: 47 TESKAEDEESKEVC--IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLIN 104
+E+K D E + L LR+ I+++ + L L++L+L N +T + L +L
Sbjct: 56 SETKISDLTGIEYATNLTELTLRFQTIEELSPLASLANLEQLDLSGNPITDLTQLGSLAQ 115
Query: 105 LEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIEN 164
L +L +S I ++ L L++L+ L+L N IS + + + L L+ DN I
Sbjct: 116 LRVLSISEAEITDLTPLASLSSLQWLFLSKNSISNLSPIAGIATLSYLDFEDNPIADFSP 175
Query: 165 LDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENG 224
L +T L L L + + LA L L L N L ++E L L L Q +S+N
Sbjct: 176 LSQITTLTTLNLRNTGFNSLAPLAPLKSLRSLDASENLLSSLEGLNQLPQLQQFQVSDNY 235
Query: 225 LTTIENL 231
LT I L
Sbjct: 236 LTDITPL 242
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 3/189 (1%)
Query: 92 QLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKV 151
L I +LD++ N+ +L+ S ++ I L L LE + L + +S I ++ L
Sbjct: 679 SLDPIASLDSITNINVLNAS---LQNIDALSQLTRLETITLKNCGLSYIPILNCEDSLIS 735
Query: 152 LELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEA 211
L+LGDN I I L L+ +E L L N I + LA L +++ L L + + L+
Sbjct: 736 LDLGDNNIVDIAPLTPLSKIETLTLNYNPIEDLSALAELLEISYLDLSGTQPSDLAPLQG 795
Query: 212 LTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L+ + L LSE ++ I L S L +LD++ N+I ++ + +T L E + N+V D
Sbjct: 796 LSKVNTLNLSETEISEINALSSFSALISLDISANQIVSLEPLTTITSLTEIYGFSNEVED 855
Query: 272 WNTVNVLEN 280
+ L N
Sbjct: 856 LTPILKLPN 864
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 117/231 (50%), Gaps = 20/231 (8%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENL---DTLINLEILDLSFNRIREIKGLDHLANL 127
++ I+ + LT L+ + L + L+ I L D+LI+L++ D N I +I L L+ +
Sbjct: 699 LQNIDALSQLTRLETITLKNCGLSYIPILNCEDSLISLDLGD---NNIVDIAPLTPLSKI 755
Query: 128 EKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNL 187
E L L N I + + L ++ L+L + + L GL+ + L L + +IS I+ L
Sbjct: 756 ETLTLNYNPIEDLSALAELLEISYLDLSGTQPSDLAPLQGLSKVNTLNLSETEISEINAL 815
Query: 188 ASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKI 247
+S + L L + N++ ++E L +T+LT++Y N + + +L L ++ +NK+
Sbjct: 816 SSFSALISLDISANQIVSLEPLTTITSLTEIYGFSNEVEDLTPILKLPNLVRIEFPWNKV 875
Query: 248 S------IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQL--QTIYLD 290
I N+ HL ++ N ++D + + L N K+L Q +LD
Sbjct: 876 HDLSPFLISPNVEHLD------LSFNYITDLSPITNLPNLKELSVQGNFLD 920
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 137 ISKIENVDHLKKLKVLEL-GDNKIRI--IENLDGLTNLEELYLGKNKISRIDNLASLTKL 193
IS + + H L L + G I + I +LD +TN+ L + ID L+ LT+L
Sbjct: 655 ISSLNGLQHAVNLGSLSISGHTTISLDPIASLDSITNINVL---NASLQNIDALSQLTRL 711
Query: 194 NILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNI 253
++L+ L I L +L L L +N + I L K+ETL + YN I + +
Sbjct: 712 ETITLKNCGLSYIPILNCEDSLISLDLGDNNIVDIAPLTPLSKIETLTLNYNPIEDLSAL 771
Query: 254 AHLTELQEFWINDNQVSD 271
A L E+ ++ Q SD
Sbjct: 772 AELLEISYLDLSGTQPSD 789
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 96/240 (40%), Gaps = 5/240 (2%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
IE L L +N I+ + + L + L+L Q + + L L + L+LS I EI
Sbjct: 755 IETLTLNYNPIEDLSALAELLEISYLDLSGTQPSDLAPLQGLSKVNTLNLSETEISEINA 814
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L + L L + +N+I +E + + L + N++ + + L NL + NK
Sbjct: 815 LSSFSALISLDISANQIVSLEPLTTITSLTEIYGFSNEVEDLTPILKLPNLVRIEFPWNK 874
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
+ + + L L N + + + L NL +L + N L NE L+TL
Sbjct: 875 VHDLSPFLISPNVEHLDLSFNYITDLSPITNLPNLKELSVQGNFLDLSSGSAQNEHLQTL 934
Query: 241 D--VAYNKISIIQNIAHLTELQEFWINDNQ---VSDWNTVNVLENNKQLQTIYLDRNPVA 295
+ ++ E F + + +++ T L+ + I D +P A
Sbjct: 935 SEQGVTGSFDFQRALSGTVESSAFSVGPEKKTLSTNFTTTGRLKASTSANWISFDYDPFA 994
>gi|126143314|gb|ABN80100.1| IspA [Listeria monocytogenes]
Length = 589
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 113/192 (58%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L T+ L L ++ +E ++ L NL L L+ N++ +I L L NL L L N IS
Sbjct: 70 LDTINSLTLTSKGISSLEGMNYLTNLGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISD 129
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I + +LK L+ L++ D ++ I L GLTNL+ L L N++ + + SL +L L++
Sbjct: 130 ISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLRSLNVS 189
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N+L ++ L+AL+NL+ LY +EN + ++ L + L LD++ N+I +A LT++
Sbjct: 190 NNKLTNLDELQALSNLSVLYANENQINNLQGLSNLNNLFLLDLSANQIVDTTPLAGLTKV 249
Query: 260 QEFWINDNQVSD 271
Q ++++NQ+SD
Sbjct: 250 QTLYVSNNQISD 261
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 112/199 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+L N + I + LT L L+L N ++ I L L NL+ LD++ ++ +I
Sbjct: 95 LGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITP 154
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L +N++ + V+ L +L+ L + +NK+ ++ L L+NL LY +N+
Sbjct: 155 LSGLTNLKGLGLYNNQLENLSGVNSLHQLRSLNVSNNKLTNLDELQALSNLSVLYANENQ 214
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + L++L L +L L N++ L LT + LY+S N ++ + L S L+ L
Sbjct: 215 INNLQGLSNLNNLFLLDLSANQIVDTTPLAGLTKVQTLYVSNNQISDVTGLSSLINLDWL 274
Query: 241 DVAYNKISIIQNIAHLTEL 259
D++ NKIS I+ + LT+L
Sbjct: 275 DISQNKISNIRPLNSLTKL 293
>gi|226222980|ref|YP_002757087.1| internalin [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|254854502|ref|ZP_05243850.1| internalin [Listeria monocytogenes FSL R2-503]
gi|300766366|ref|ZP_07076324.1| internalin [Listeria monocytogenes FSL N1-017]
gi|386731118|ref|YP_006204614.1| internalin A [Listeria monocytogenes 07PF0776]
gi|404279907|ref|YP_006680805.1| hypothetical protein LMOSLCC2755_0355 [Listeria monocytogenes
SLCC2755]
gi|404285723|ref|YP_006692309.1| hypothetical protein LMOSLCC2482_0356 [Listeria monocytogenes
serotype 7 str. SLCC2482]
gi|406703127|ref|YP_006753481.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes L312]
gi|225875442|emb|CAS04139.1| Putative internalin, peptidoglycan bound protein (LPxTG motif)
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|258607901|gb|EEW20509.1| internalin [Listeria monocytogenes FSL R2-503]
gi|300512917|gb|EFK40006.1| internalin [Listeria monocytogenes FSL N1-017]
gi|384389876|gb|AFH78946.1| internalin A [Listeria monocytogenes 07PF0776]
gi|404226542|emb|CBY47947.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes SLCC2755]
gi|404244652|emb|CBY02877.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|406360157|emb|CBY66430.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes L312]
Length = 589
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 113/192 (58%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L T+ L L ++ +E ++ L NL L L+ N++ +I L L NL L L N IS
Sbjct: 70 LDTINSLTLTSKGISSLEGMNYLTNLGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISD 129
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I + +LK L+ L++ D ++ I L GLTNL+ L L N++ + + SL +L L++
Sbjct: 130 ISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLRSLNVS 189
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N+L ++ L+AL+NL+ LY +EN + ++ L + L LD++ N+I +A LT++
Sbjct: 190 NNKLTNLDELQALSNLSVLYANENQINNLQGLSNLNNLFLLDLSANQIVDTTPLAGLTKV 249
Query: 260 QEFWINDNQVSD 271
Q ++++NQ+SD
Sbjct: 250 QTLYVSNNQISD 261
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 112/199 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+L N + I + LT L L+L N ++ I L L NL+ LD++ ++ +I
Sbjct: 95 LGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITP 154
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L +N++ + V+ L +L+ L + +NK+ ++ L L+NL LY +N+
Sbjct: 155 LSGLTNLKGLGLYNNQLENLSGVNSLHQLRSLNVSNNKLTNLDELQALSNLSVLYANENQ 214
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + L++L L +L L N++ L LT + LY+S N ++ + L S L+ L
Sbjct: 215 INNLQGLSNLNNLFLLDLSANQIVDTTPLAGLTKVQTLYVSNNQISDVTGLSSLINLDWL 274
Query: 241 DVAYNKISIIQNIAHLTEL 259
D++ NKIS I+ + LT+L
Sbjct: 275 DISQNKISNIRPLNSLTKL 293
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%)
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
IS+I D L LG + + L + L L IS ++ + LT L L
Sbjct: 39 ISQIFPDDALATEIQTTLGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYLTNLGTL 98
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
L N++ I L+ LTNLT L LS N ++ I L + + L+ LD+ +++ I ++ L
Sbjct: 99 ILTGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGL 158
Query: 257 TELQEFWINDNQVSDWNTVNVLENNKQL 284
T L+ + +NQ+ + + VN L + L
Sbjct: 159 TNLKGLGLYNNQLENLSGVNSLHQLRSL 186
>gi|254825837|ref|ZP_05230838.1| IspA [Listeria monocytogenes FSL J1-194]
gi|254933353|ref|ZP_05266712.1| IspA [Listeria monocytogenes HPB2262]
gi|405748714|ref|YP_006672180.1| hypothetical protein LMOATCC19117_0379 [Listeria monocytogenes ATCC
19117]
gi|405754445|ref|YP_006677909.1| hypothetical protein LMOSLCC2540_0366 [Listeria monocytogenes
SLCC2540]
gi|417316641|ref|ZP_12103282.1| internalin A [Listeria monocytogenes J1-220]
gi|424822091|ref|ZP_18247104.1| Internalin [Listeria monocytogenes str. Scott A]
gi|293584914|gb|EFF96946.1| IspA [Listeria monocytogenes HPB2262]
gi|293595076|gb|EFG02837.1| IspA [Listeria monocytogenes FSL J1-194]
gi|328475973|gb|EGF46691.1| internalin A [Listeria monocytogenes J1-220]
gi|332310771|gb|EGJ23866.1| Internalin [Listeria monocytogenes str. Scott A]
gi|404217914|emb|CBY69278.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes ATCC 19117]
gi|404223645|emb|CBY75007.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes SLCC2540]
Length = 589
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 113/192 (58%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L T+ L L ++ +E ++ L NL L L+ N++ +I L L NL L L N IS
Sbjct: 70 LDTINSLTLTSKGISSLEGMNYLTNLGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISD 129
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I + +LK L+ L++ D ++ I L GLTNL+ L L N++ + + SL +L L++
Sbjct: 130 ISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLRSLNVS 189
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N+L ++ L+AL+NL+ LY +EN + ++ L + L LD++ N+I +A LT++
Sbjct: 190 NNKLTNLDELQALSNLSVLYANENQINNLQGLSNLNNLFLLDLSANQIVDTTPLAGLTKV 249
Query: 260 QEFWINDNQVSD 271
Q ++++NQ+SD
Sbjct: 250 QTLYVSNNQISD 261
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 112/199 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+L N + I + LT L L+L N ++ I L L NL+ LD++ ++ +I
Sbjct: 95 LGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITP 154
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L +N++ + V+ L +L+ L + +NK+ ++ L L+NL LY +N+
Sbjct: 155 LSGLTNLKGLGLYNNQLENLSGVNSLHQLRSLNVSNNKLTNLDELQALSNLSVLYANENQ 214
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + L++L L +L L N++ L LT + LY+S N ++ + L S L+ L
Sbjct: 215 INNLQGLSNLNNLFLLDLSANQIVDTTPLAGLTKVQTLYVSNNQISDVTGLSSLINLDWL 274
Query: 241 DVAYNKISIIQNIAHLTEL 259
D++ NKIS I+ + LT+L
Sbjct: 275 DISQNKISNIRPLNSLTKL 293
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%)
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
IS+I D L LG + + L + L L IS ++ + LT L L
Sbjct: 39 ISQIFPDDALATEIQTTLGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYLTNLGTL 98
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
L N++ I L+ LTNLT L LS N ++ I L + + L+ LD+ +++ I ++ L
Sbjct: 99 ILTGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGL 158
Query: 257 TELQEFWINDNQVSDWNTVNVLENNKQL 284
T L+ + +NQ+ + + VN L + L
Sbjct: 159 TNLKGLGLYNNQLENLSGVNSLHQLRSL 186
>gi|254992186|ref|ZP_05274376.1| internalin [Listeria monocytogenes FSL J2-064]
Length = 589
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 113/192 (58%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L T+ L L ++ +E ++ L NL L L+ N++ +I L L NL L L N IS
Sbjct: 70 LDTINSLTLTSKGISSLEGMNYLTNLGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISD 129
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I + +LK L+ L++ D ++ I L GLTNL+ L L N++ + + SL +L L++
Sbjct: 130 ISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLRSLNVS 189
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N+L ++ L+AL+NL+ LY +EN + ++ L + L LD++ N+I +A LT++
Sbjct: 190 NNKLTNLDELQALSNLSVLYANENQINNLQGLSNLNNLFLLDLSANQIVDTTPLAGLTKV 249
Query: 260 QEFWINDNQVSD 271
Q ++++NQ+SD
Sbjct: 250 QTLYVSNNQISD 261
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 112/199 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+L N + I + LT L L+L N ++ I L L NL+ LD++ ++ +I
Sbjct: 95 LGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITP 154
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L +N++ + V+ L +L+ L + +NK+ ++ L L+NL LY +N+
Sbjct: 155 LSGLTNLKGLGLYNNQLENLSGVNSLHQLRSLNVSNNKLTNLDELQALSNLSVLYANENQ 214
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + L++L L +L L N++ L LT + LY+S N ++ + L S L+ L
Sbjct: 215 INNLQGLSNLNNLFLLDLSANQIVDTTPLAGLTKVQTLYVSNNQISDVTGLSSLINLDWL 274
Query: 241 DVAYNKISIIQNIAHLTEL 259
D++ NKIS I+ + LT+L
Sbjct: 275 DISQNKISNIRPLNSLTKL 293
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%)
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
IS+I D L LG + + L + L L IS ++ + LT L L
Sbjct: 39 ISQIFPDDALATEIQTTLGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYLTNLGTL 98
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
L N++ I L+ LTNLT L LS N ++ I L + + L+ LD+ +++ I ++ L
Sbjct: 99 ILTGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGL 158
Query: 257 TELQEFWINDNQVSDWNTVNVLENNKQL 284
T L+ + +NQ+ + + VN L + L
Sbjct: 159 TNLKGLGLYNNQLENLSGVNSLHQLRSL 186
>gi|407708511|ref|YP_006832096.1| protein FeoA [Bacillus thuringiensis MC28]
gi|407386196|gb|AFU16697.1| internalin protein [Bacillus thuringiensis MC28]
Length = 887
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 129/228 (56%), Gaps = 4/228 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L L+ +DL+ N I+ I ++ L N+ L
Sbjct: 220 INEIAGLEHMTNLEKLTLRESNVTDISAISKLRYLKYVDLTSNPIKNIHPIEQLENINML 279
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKIS + + +KK+K L+L N I I+ L L+ +++LYL N+IS + + L
Sbjct: 280 FLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQL 339
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ + +L + N++ +E++ ++NL +L ++++ + I L KL+ L++ N IS I
Sbjct: 340 SNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDI 399
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPV 294
+++LT+L E + N+++D V L + Q Q I+LD V
Sbjct: 400 SPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQKIFLDEASV 447
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 103/182 (56%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N IK I I L + L L DN+++ + L + ++ LDL N I +I+ L L+
Sbjct: 259 LTSNPIKNIHPIEQLENINMLFLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLS 318
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+++LYL +N+IS + ++ L +++L +G+NKI +E++ ++NL EL + ++I I
Sbjct: 319 TMKQLYLANNQISDLTGINQLSNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDIS 378
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L+ L KL +L+L+ N + I L LT+L ++ L N + + + K ++D+
Sbjct: 379 PLSKLGKLQVLNLEENYISDISPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQ 438
Query: 246 KI 247
KI
Sbjct: 439 KI 440
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+L ++ +
Sbjct: 550 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 609
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
N+I I L L NL+ L L N I + + S+ L L+L N I ++ L L
Sbjct: 610 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNE---ICDVRPLIQLG 666
Query: 217 QLYLSENGLTTI 228
Q + + G TI
Sbjct: 667 QWFSIDVGRQTI 678
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 69/118 (58%)
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E++ +K L++L+ +I+ + L+ +TNLE L L + I+ +++L +LNI+++
Sbjct: 550 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 609
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ I L +L NL L L++N + + + S L +L++A N+I ++ + L +
Sbjct: 610 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNEICDVRPLIQLGQ 667
>gi|255522340|ref|ZP_05389577.1| internalin [Listeria monocytogenes FSL J1-175]
Length = 519
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 113/192 (58%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L T+ L L ++ +E ++ L NL L L+ N++ +I L L NL L L N IS
Sbjct: 70 LDTINSLTLTSKGISSLEGMNYLTNLGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISD 129
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I + +LK L+ L++ D ++ I L GLTNL+ L L N++ + + SL +L L++
Sbjct: 130 ISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLRSLNVS 189
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N+L ++ L+AL+NL+ LY +EN + ++ L + L LD++ N+I +A LT++
Sbjct: 190 NNKLTNLDELQALSNLSVLYANENQINNLQGLSNLNNLFLLDLSANQIVDTTPLAGLTKV 249
Query: 260 QEFWINDNQVSD 271
Q ++++NQ+SD
Sbjct: 250 QTLYVSNNQISD 261
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 112/199 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+L N + I + LT L L+L N ++ I L L NL+ LD++ ++ +I
Sbjct: 95 LGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITP 154
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L +N++ + V+ L +L+ L + +NK+ ++ L L+NL LY +N+
Sbjct: 155 LSGLTNLKGLGLYNNQLENLSGVNSLHQLRSLNVSNNKLTNLDELQALSNLSVLYANENQ 214
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + L++L L +L L N++ L LT + LY+S N ++ + L S L+ L
Sbjct: 215 INNLQGLSNLNNLFLLDLSANQIVDTTPLAGLTKVQTLYVSNNQISDVTGLSSLINLDWL 274
Query: 241 DVAYNKISIIQNIAHLTEL 259
D++ NKIS I+ + LT+L
Sbjct: 275 DISQNKISNIRPLNSLTKL 293
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%)
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
IS+I D L LG + + L + L L IS ++ + LT L L
Sbjct: 39 ISQIFPDDALATEIQTTLGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYLTNLGTL 98
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
L N++ I L+ LTNLT L LS N ++ I L + + L+ LD+ +++ I ++ L
Sbjct: 99 ILTGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGL 158
Query: 257 TELQEFWINDNQVSDWNTVNVLENNKQL 284
T L+ + +NQ+ + + VN L + L
Sbjct: 159 TNLKGLGLYNNQLENLSGVNSLHQLRSL 186
>gi|46906594|ref|YP_012983.1| internalin [Listeria monocytogenes serotype 4b str. F2365]
gi|405751575|ref|YP_006675040.1| hypothetical protein LMOSLCC2378_0371 [Listeria monocytogenes
SLCC2378]
gi|424713227|ref|YP_007013942.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|46879859|gb|AAT03160.1| internalin [Listeria monocytogenes serotype 4b str. F2365]
gi|404220775|emb|CBY72138.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes SLCC2378]
gi|424012411|emb|CCO62951.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
Length = 589
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 113/192 (58%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L T+ L L ++ +E ++ L NL L L+ N++ +I L L NL L L N IS
Sbjct: 70 LDTINSLTLTSKGISSLEGMNYLTNLGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISD 129
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I + +LK L+ L++ D ++ I L GLTNL+ L L N++ + + SL +L L++
Sbjct: 130 ISALSNLKNLQALDINDAQVTDITPLSGLTNLKGLGLYNNQLENLSGVNSLHQLRSLNVS 189
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N+L ++ L+AL+NL+ LY +EN + ++ L + L LD++ N+I +A LT++
Sbjct: 190 NNKLTNLDELQALSNLSVLYANENQINNLQGLSNLNNLFLLDLSANQIVDTTPLAGLTKV 249
Query: 260 QEFWINDNQVSD 271
Q ++++NQ+SD
Sbjct: 250 QTLYVSNNQISD 261
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 112/199 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+L N + I + LT L L+L N ++ I L L NL+ LD++ ++ +I
Sbjct: 95 LGTLILTGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITP 154
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L +N++ + V+ L +L+ L + +NK+ ++ L L+NL LY +N+
Sbjct: 155 LSGLTNLKGLGLYNNQLENLSGVNSLHQLRSLNVSNNKLTNLDELQALSNLSVLYANENQ 214
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ + L++L L +L L N++ L LT + LY+S N ++ + L S L+ L
Sbjct: 215 INNLQGLSNLNNLFLLDLSANQIVDTTPLAGLTKVQTLYVSNNQISDVTGLSSLINLDWL 274
Query: 241 DVAYNKISIIQNIAHLTEL 259
D++ NKIS I+ + LT+L
Sbjct: 275 DISQNKISNIRPLNSLTKL 293
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 72/148 (48%)
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNIL 196
IS+I D L LG + + L + L L IS ++ + LT L L
Sbjct: 39 ISQIFPDDALATEIQTTLGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYLTNLGTL 98
Query: 197 SLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHL 256
L N++ I L+ LTNLT L LS N ++ I L + + L+ LD+ +++ I ++ L
Sbjct: 99 ILTGNQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGL 158
Query: 257 TELQEFWINDNQVSDWNTVNVLENNKQL 284
T L+ + +NQ+ + + VN L + L
Sbjct: 159 TNLKGLGLYNNQLENLSGVNSLHQLRSL 186
>gi|400261301|pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
gi|400261302|pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 125/256 (48%), Gaps = 26/256 (10%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L++ + I+ I LT L+ L L NQ+T I L L+ L L + N+I +I
Sbjct: 45 SITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDIS 104
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN---------------------- 157
L +L NL +LYL + IS I + +L K L LG N
Sbjct: 105 ALQNLTNLRELYLNEDNISDISPLANLTKXYSLNLGANHNLSDLSPLSNXTGLNYLTVTE 164
Query: 158 -KIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
K++ + + LT+L L L N+I I LASLT L+ + N++ I + T L
Sbjct: 165 SKVKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANXTRLN 224
Query: 217 QLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN 276
L + N +T + L + +L L++ N+IS I + LT+L+ + NQ+SD ++
Sbjct: 225 SLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKXLNVGSNQISD---IS 281
Query: 277 VLENNKQLQTIYLDRN 292
VL N QL +++L+ N
Sbjct: 282 VLNNLSQLNSLFLNNN 297
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
+K + I LT L L L NQ+ I L +L +L N+I +I + + L L
Sbjct: 167 VKDVTPIANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITPVANXTRLNSL 226
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+ +NKI+ + + +L +L LE+G N+I I + LT L+ L +G N+IS I L +L
Sbjct: 227 KIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKXLNVGSNQISDISVLNNL 286
Query: 191 TKLNILSLQCNRLRT--IENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
++LN L L N+L E + LTNLT L+LS+N +T I L S K ++ D A
Sbjct: 287 SQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDIRPLASLSKXDSADFA 341
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 187 LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNK 246
L S+TKL + ++ +I+ +E LTNL L L+ N +T I L + KL L + NK
Sbjct: 43 LESITKLVV---AGEKVASIQGIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNK 99
Query: 247 ISIIQNIAHLTELQEFWINDNQVSD 271
I+ I + +LT L+E ++N++ +SD
Sbjct: 100 ITDISALQNLTNLRELYLNEDNISD 124
>gi|386042598|ref|YP_005961403.1| internalin E [Listeria monocytogenes 10403S]
gi|404409495|ref|YP_006695083.1| internalin E [Listeria monocytogenes SLCC5850]
gi|2347106|gb|AAB67971.1| inlE [Listeria monocytogenes]
gi|345535832|gb|AEO05272.1| internalin E [Listeria monocytogenes 10403S]
gi|404229321|emb|CBY50725.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC5850]
Length = 499
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 75 SVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLKNLTKITELRLSGNPLKDVS 134
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL+ + L I+ + + L L+VL L N+I I L GL+NL+ L G
Sbjct: 135 ALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGST 194
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL-------- 231
++S + LA+L+KL L+ +++ + L L+NLT++YL EN ++ + L
Sbjct: 195 QVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSI 254
Query: 232 --LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L+N+ + V Y I+ N+ +T L I + +SD T
Sbjct: 255 VTLTNQTITNQPVFYQNKPIVPNV--VTGLSGELIAPDTISDNGT 297
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+GL +L NL +L L N+++ + + +L K+ L L N ++ + L GL NL+ +
Sbjct: 86 ITTIEGLQYLTNLSELELIDNQVTDLNPLKNLTKITELRLSGNPLKDVSALAGLKNLKTM 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L I+ + LA L+ L +L+L N++ I L L+NL L ++ + L +
Sbjct: 146 DLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL TL+ +K+S + + L+ L E ++ +NQ+SD + + L N L + L +
Sbjct: 206 SKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPN---LSIVTLTNQTI 262
Query: 295 AQDPNYRRKIKLVCPWIV 312
P + + K + P +V
Sbjct: 263 TNQPVFYQN-KPIVPNVV 279
>gi|255017381|ref|ZP_05289507.1| internalin D [Listeria monocytogenes FSL F2-515]
Length = 352
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 136/278 (48%), Gaps = 32/278 (11%)
Query: 32 QMSLDNPDEESEAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDN 91
+++L P+ S+ TE + E + E I +E + L L L L +N
Sbjct: 56 KITLSKPNTTSDVSQTELDSISEVTAESSN---------IASLEGVQYLNNLDTLVLNNN 106
Query: 92 QLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKV 151
++T + L L L IL+ S N++ +I L ++ NL +L L N+I ++ V +L L+
Sbjct: 107 KITTLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNLINLET 166
Query: 152 LELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEA 211
+EL +N+I I + GL NL L + NKIS + ++ L+KLN L+ N+ I +L
Sbjct: 167 IELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQ---ISDLRP 223
Query: 212 LTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L+NL +E + + N+IS + IA+L L ++ +NQ+SD
Sbjct: 224 LSNLA-------------------AMEVMRLDGNQISDVTPIANLANLNYVFLAENQISD 264
Query: 272 WNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
+++ L N+ I LD + +P ++ +LV P
Sbjct: 265 ISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 301
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 87/165 (52%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI ++LAN K+ L + + L + + + I +E + L NL+ L
Sbjct: 42 INEIFTDENLANAIKITLSKPNTTSDVSQTELDSISEVTAESSNIASLEGVQYLNNLDTL 101
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L NKI+ ++ LA LTKL+IL N+L I L +TNL QL L N + + + +
Sbjct: 102 VLNNNKITTLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNL 161
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 162 INLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 206
>gi|395837056|ref|XP_003791461.1| PREDICTED: dynein assembly factor 1, axonemal [Otolemur garnettii]
Length = 706
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 162 IENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLS 221
IENL+ T L L+L N I RI+NL + T+L L LQ N LR IENLE L L L LS
Sbjct: 121 IENLEEYTGLRCLWLECNGIQRIENLEAQTELRCLFLQVNLLRKIENLEPLQKLDALNLS 180
Query: 222 ENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWIND---NQVSDWNTVNVL 278
N + TIENL L TL +A+N + +++I HL E Q + D N++SD ++VL
Sbjct: 181 NNYIRTIENLSCLPVLNTLQIAHNHLETVEDIQHLKECQRLCVLDLSHNKLSDPEILSVL 240
Query: 279 ENNKQLQTIYLDRNPVAQD-PNYRR 302
E+ L+ + L NPV ++ PNYRR
Sbjct: 241 ESMPDLRVLNLMGNPVIRNIPNYRR 265
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 87/177 (49%), Gaps = 13/177 (7%)
Query: 86 LELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDH 145
L L+ IENL+ L L L N I+ I+ L+ L L+L N + KIEN++
Sbjct: 111 LYLHYKGFDRIENLEEYTGLRCLWLECNGIQRIENLEAQTELRCLFLQVNLLRKIENLEP 170
Query: 146 LKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL---TKLNILSLQCNR 202
L+KL L L +N IR IENL L L L + N + ++++ L +L +L L N+
Sbjct: 171 LQKLDALNLSNNYIRTIENLSCLPVLNTLQIAHNHLETVEDIQHLKECQRLCVLDLSHNK 230
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
L E L L ++ L + NL+ N + + Y +I+ ++ + HLT L
Sbjct: 231 LSDPEILSVLESMPDLR--------VLNLMGNPVIRNI-PNYRRIATVR-LKHLTYL 277
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 7/152 (4%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L + +IEN+ T L+ L L N + IENL+ L L L N +R+I+ L+
Sbjct: 111 LYLHYKGFDRIENLEEYTGLRCLWLECNGIQRIENLEAQTELRCLFLQVNLLRKIENLEP 170
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY---LGKNK 180
L L+ L L +N I IEN+ L L L++ N + +E++ L + L L NK
Sbjct: 171 LQKLDALNLSNNYIRTIENLSCLPVLNTLQIAHNHLETVEDIQHLKECQRLCVLDLSHNK 230
Query: 181 ISRIDNLA---SLTKLNILSLQCNR-LRTIEN 208
+S + L+ S+ L +L+L N +R I N
Sbjct: 231 LSDPEILSVLESMPDLRVLNLMGNPVIRNIPN 262
>gi|254828724|ref|ZP_05233411.1| inlE [Listeria monocytogenes FSL N3-165]
gi|258601129|gb|EEW14454.1| inlE [Listeria monocytogenes FSL N3-165]
Length = 499
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 75 SVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLKNLTKITELRLSGNPLKDVS 134
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL+ + L I+ + + L L+VL L N+I I L GL+NL+ L G
Sbjct: 135 ALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGST 194
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL-------- 231
++S + LA+L+KL L+ +++ + L L+NLT++YL EN ++ + L
Sbjct: 195 QVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSI 254
Query: 232 --LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L+N+ + V Y I+ N+ +T L I + +SD T
Sbjct: 255 VTLTNQTITNQPVFYQNKPIVPNV--VTGLSGELIAPDTISDNGT 297
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+GL +L NL +L L N+++ + + +L K+ L L N ++ + L GL NL+ +
Sbjct: 86 ITTIEGLQYLTNLSELELIDNQVTDLNPLKNLTKITELRLSGNPLKDVSALAGLKNLKTM 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L I+ + LA L+ L +L+L N++ I L L+NL L ++ + L +
Sbjct: 146 DLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL TL+ +K+S + + L+ L E ++ +NQ+SD + + L N L + L +
Sbjct: 206 SKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPN---LSIVTLTNQTI 262
Query: 295 AQDPNYRRKIKLVCPWIV 312
P + + K + P +V
Sbjct: 263 TNQPVFYQN-KPIVPNVV 279
>gi|83629899|gb|ABC26611.1| internalin E [Listeria monocytogenes]
gi|83629915|gb|ABC26619.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 74 SVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLKNLTKITELRLSGNPLKDVS 133
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL+ + L I+ + + L L+VL L N+I I L GL+NL+ L G
Sbjct: 134 ALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGST 193
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL-------- 231
++S + LA+L+KL L+ +++ + L L+NLT++YL EN ++ + L
Sbjct: 194 QVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSI 253
Query: 232 --LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L+N+ + V Y I+ N+ +T L I + +SD T
Sbjct: 254 VTLTNQTITNQPVFYQNKPIVPNV--VTGLSGELIAPDTISDNGT 296
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+GL +L NL +L L N+++ + + +L K+ L L N ++ + L GL NL+ +
Sbjct: 85 ITTIEGLQYLTNLSELELIDNQVTDLNPLKNLTKITELRLSGNPLKDVSALAGLKNLKTM 144
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L I+ + LA L+ L +L+L N++ I L L+NL L ++ + L +
Sbjct: 145 DLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANL 204
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL TL+ +K+S + + L+ L E ++ +NQ+SD + + L N L + L +
Sbjct: 205 SKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPN---LSIVTLTNQTI 261
Query: 295 AQDPNYRRKIKLVCPWIV 312
P + + K + P +V
Sbjct: 262 TNQPVFYQN-KPIVPNVV 278
>gi|386052545|ref|YP_005970103.1| internalin E [Listeria monocytogenes Finland 1998]
gi|346645196|gb|AEO37821.1| internalin E [Listeria monocytogenes Finland 1998]
gi|441469815|emb|CCQ19570.1| Internalin-A [Listeria monocytogenes]
gi|441472952|emb|CCQ22706.1| Internalin-A [Listeria monocytogenes N53-1]
Length = 499
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 75 SVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS 134
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL+ + L I+ + + L L+VL L N+I I L GL+NL+ L G
Sbjct: 135 ALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGST 194
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL-------- 231
++S + LA+L+KL L+ +++ + L L+NLT++YL EN ++ + L
Sbjct: 195 QVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSI 254
Query: 232 --LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L+N+ + V Y I+ N+ +T L I + +SD T
Sbjct: 255 VTLTNQTITNQPVFYQNKPIVPNV--VTGLSGELIAPDTISDNGT 297
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+GL +L NL +L L N+++ + + +L K+ L L N ++ + L GL NL+ +
Sbjct: 86 ITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTM 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L I+ + LA L+ L +L+L N++ I L L+NL L ++ + L +
Sbjct: 146 DLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL TL+ +K+S + + L+ L E ++ +NQ+SD + + L N L + L +
Sbjct: 206 SKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPN---LSIVTLTNQTI 262
Query: 295 AQDPNYRRKIKLVCPWIV 312
P + + K + P +V
Sbjct: 263 TNQPVFYQN-KPIVPNVV 279
>gi|83629907|gb|ABC26615.1| internalin E [Listeria monocytogenes]
gi|83629941|gb|ABC26632.1| internalin E [Listeria monocytogenes]
gi|83629951|gb|ABC26637.1| internalin E [Listeria monocytogenes]
gi|83629955|gb|ABC26639.1| internalin E [Listeria monocytogenes]
gi|83629957|gb|ABC26640.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 74 SVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS 133
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL+ + L I+ + + L L+VL L N+I I L GL+NL+ L G
Sbjct: 134 ALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGST 193
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL-------- 231
++S + LA+L+KL L+ +++ + L L+NLT++YL EN ++ + L
Sbjct: 194 QVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSI 253
Query: 232 --LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L+N+ + V Y I+ N+ +T L I + +SD T
Sbjct: 254 VTLTNQTITNQPVFYQNKPIVPNV--VTGLSGELIAPDTISDNGT 296
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+GL +L NL +L L N+++ + + +L K+ L L N ++ + L GL NL+ +
Sbjct: 85 ITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTM 144
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L I+ + LA L+ L +L+L N++ I L L+NL L ++ + L +
Sbjct: 145 DLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANL 204
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL TL+ +K+S + + L+ L E ++ +NQ+SD + + L N L + L +
Sbjct: 205 SKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPN---LSIVTLTNQTI 261
Query: 295 AQDPNYRRKIKLVCPWIV 312
P + + K + P +V
Sbjct: 262 TNQPVFYQN-KPIVPNVV 278
>gi|83629947|gb|ABC26635.1| internalin E [Listeria monocytogenes]
gi|83629949|gb|ABC26636.1| internalin E [Listeria monocytogenes]
gi|83629971|gb|ABC26647.1| internalin E [Listeria monocytogenes]
gi|83629973|gb|ABC26648.1| internalin E [Listeria monocytogenes]
gi|83629975|gb|ABC26649.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 74 SVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS 133
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL+ + L I+ + + L L+VL L N+I I L GL+NL+ L G
Sbjct: 134 ALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGST 193
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL-------- 231
++S + LA+L+KL L+ +++ + L L+NLT++YL EN ++ + L
Sbjct: 194 QVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSI 253
Query: 232 --LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L+N+ + V Y I+ N+ +T L I + +SD T
Sbjct: 254 VTLTNQTITNQPVFYQNKPIVPNV--VTGLSGELIAPDTISDNGT 296
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+GL +L NL +L L N+++ + + +L K+ L L N ++ + L GL NL+ +
Sbjct: 85 ITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTM 144
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L I+ + LA L+ L +L+L N++ I L L+NL L ++ + L +
Sbjct: 145 DLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANL 204
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL TL+ +K+S + + L+ L E ++ +NQ+SD + + L N L + L +
Sbjct: 205 SKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPN---LSIVTLTNQTI 261
Query: 295 AQDPNYRRKIKLVCPWIV 312
P + + K + P +V
Sbjct: 262 TNQPVFYQN-KPIVPNVV 278
>gi|255026402|ref|ZP_05298388.1| internalin E [Listeria monocytogenes FSL J2-003]
Length = 480
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 56 SVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS 115
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL+ + L I+ + + L L+VL L N+I I L GL+NL+ L G
Sbjct: 116 ALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGST 175
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL-------- 231
++S + LA+L+KL L+ +++ + L L+NLT++YL EN ++ + L
Sbjct: 176 QVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSI 235
Query: 232 --LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L+N+ + V Y I+ N+ +T L I + +SD T
Sbjct: 236 VTLTNQTITNQPVFYQNKPIVPNV--VTGLSGELIAPDTISDNGT 278
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+GL +L NL +L L N+++ + + +L K+ L L N ++ + L GL NL+ +
Sbjct: 67 ITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTM 126
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L I+ + LA L+ L +L+L N++ I L L+NL L ++ + L +
Sbjct: 127 DLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANL 186
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL TL+ +K+S + + L+ L E ++ +NQ+SD + + L N L + L +
Sbjct: 187 SKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPN---LSIVTLTNQTI 243
Query: 295 AQDPNYRRKIKLVCPWIV 312
P + + K + P +V
Sbjct: 244 TNQPVFYQN-KPIVPNVV 260
>gi|255028875|ref|ZP_05300826.1| internalin E [Listeria monocytogenes LO28]
gi|284800562|ref|YP_003412427.1| internalin E [Listeria monocytogenes 08-5578]
gi|284993748|ref|YP_003415516.1| internalin E [Listeria monocytogenes 08-5923]
gi|386049193|ref|YP_005967184.1| internalin E [Listeria monocytogenes FSL R2-561]
gi|404282695|ref|YP_006683592.1| internalin E [Listeria monocytogenes SLCC2372]
gi|405757251|ref|YP_006686527.1| internalin E [Listeria monocytogenes SLCC2479]
gi|284056124|gb|ADB67065.1| internalin E [Listeria monocytogenes 08-5578]
gi|284059215|gb|ADB70154.1| internalin E [Listeria monocytogenes 08-5923]
gi|346423039|gb|AEO24564.1| internalin E [Listeria monocytogenes FSL R2-561]
gi|404232197|emb|CBY53600.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC2372]
gi|404235133|emb|CBY56535.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC2479]
Length = 499
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 75 SVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS 134
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL+ + L I+ + + L L+VL L N+I I L GL+NL+ L G
Sbjct: 135 ALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGST 194
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL-------- 231
++S + LA+L+KL L+ +++ + L L+NLT++YL EN ++ + L
Sbjct: 195 QVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSI 254
Query: 232 --LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L+N+ + V Y I+ N+ +T L I + +SD T
Sbjct: 255 VTLTNQTITNQPVFYQNKPIVPNV--VTGLSGELIAPDTISDNGT 297
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+GL +L NL +L L N+++ + + +L K+ L L N ++ + L GL NL+ +
Sbjct: 86 ITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTM 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L I+ + LA L+ L +L+L N++ I L L+NL L ++ + L +
Sbjct: 146 DLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL TL+ +K+S + + L+ L E ++ +NQ+SD + + L N L + L +
Sbjct: 206 SKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPN---LSIVTLTNQTI 262
Query: 295 AQDPNYRRKIKLVCPWIV 312
P + + K + P +V
Sbjct: 263 TNQPVFYQN-KPIVPNVV 279
>gi|410912040|ref|XP_003969498.1| PREDICTED: leucine-rich repeat-containing protein 49-like [Takifugu
rubripes]
Length = 654
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 112/197 (56%)
Query: 108 LDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG 167
+DL + E L+ + L+ L L NKI+ I+++ HL+KL L L DN I + ++
Sbjct: 28 IDLDRRCLVECPQLNVMDELQLLNLQHNKITTIQHLSHLQKLVFLNLNDNYISEMTGIEA 87
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
L +L L LG N+I +I LASL+KLNIL L N++ I+N+ L+ L L L+ N ++
Sbjct: 88 LGSLRILMLGNNRIRKICCLASLSKLNILDLHDNQICRIQNVSHLSELKVLNLAGNNISN 147
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+EN+ + L L++ N IS++ + L+ LQ +++ N +S + + L L +
Sbjct: 148 VENVQGLDNLTELNLRNNFISLLSEVGCLSSLQRLFLSCNNISSLDQLVCLGKLPSLCEL 207
Query: 288 YLDRNPVAQDPNYRRKI 304
LD NPVA + Y++ +
Sbjct: 208 TLDGNPVALETWYKQAV 224
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/153 (39%), Positives = 86/153 (56%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L+ N I I+++ L L L L DN ++ + ++ L +L IL L NRIR+I L L+
Sbjct: 52 LQHNKITTIQHLSHLQKLVFLNLNDNYISEMTGIEALGSLRILMLGNNRIRKICCLASLS 111
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
L L L N+I +I+NV HL +LKVL L N I +EN+ GL NL EL L N IS +
Sbjct: 112 KLNILDLHDNQICRIQNVSHLSELKVLNLAGNNISNVENVQGLDNLTELNLRNNFISLLS 171
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
+ L+ L L L CN + +++ L L L L
Sbjct: 172 EVGCLSSLQRLFLSCNNISSLDQLVCLGKLPSL 204
>gi|83629909|gb|ABC26616.1| internalin E [Listeria monocytogenes]
gi|83629919|gb|ABC26621.1| internalin E [Listeria monocytogenes]
gi|83629925|gb|ABC26624.1| internalin E [Listeria monocytogenes]
gi|83629945|gb|ABC26634.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 74 SVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS 133
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL+ + L I+ + + L L+VL L N+I I L GL+NL+ L G
Sbjct: 134 ALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGST 193
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL-------- 231
++S + LA+L+KL L+ +++ + L L+NLT++YL EN ++ + L
Sbjct: 194 QVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSI 253
Query: 232 --LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L+N+ + V Y I+ N+ +T L I + +SD T
Sbjct: 254 VTLTNQTITNQPVFYQNKPIVPNV--VTGLSGELIAPDTISDNGT 296
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+GL +L NL +L L N+++ + + +L K+ L L N ++ + L GL NL+ +
Sbjct: 85 ITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTM 144
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L I+ + LA L+ L +L+L N++ I L L+NL L ++ + L +
Sbjct: 145 DLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANL 204
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL TL+ +K+S + + L+ L E ++ +NQ+SD + + L N L + L +
Sbjct: 205 SKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPN---LSIVTLTNQTI 261
Query: 295 AQDPNYRRKIKLVCPWIV 312
P + + K + P +V
Sbjct: 262 TNQPVFYQN-KPIVPNVV 278
>gi|328951482|ref|YP_004368817.1| leucine-rich repeat-containing protein [Marinithermus
hydrothermalis DSM 14884]
gi|328451806|gb|AEB12707.1| leucine-rich repeat-containing protein [Marinithermus
hydrothermalis DSM 14884]
Length = 306
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 109/196 (55%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L L +LE +T ++ L+ NL L+L+ NR++++ L L +LE L L N++
Sbjct: 61 LADLTQLEASGAGVTSLQGLEHAPNLTRLELAVNRVQDLTPLAALEDLEYLELSFNRVQD 120
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
+ + HL +L+VL L N+I+ + L GLT L+EL L +N+++ + LA LT+L L L
Sbjct: 121 LTPLQHLTRLRVLFLRGNRIQDLTPLQGLTRLQELDLRRNRVADLTPLARLTELRFLVLS 180
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N++R + L+ L L L + N + T+ L L+TL ++ N+I + + L+ L
Sbjct: 181 FNQVRDLTPLQGLARLQGLVANHNQIQTLAPLQHLRALKTLLLSGNQIQDLTPLRPLSAL 240
Query: 260 QEFWINDNQVSDWNTV 275
+ ++ N V+D +
Sbjct: 241 EVLDLSANHVTDLTPL 256
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 92/182 (50%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ RL L N ++ + + L L+ LEL N++ + L L L +L L NRI+++
Sbjct: 86 LTRLELAVNRVQDLTPLAALEDLEYLELSFNRVQDLTPLQHLTRLRVLFLRGNRIQDLTP 145
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L++L L N+++ + + L +L+ L L N++R + L GL L+ L N+
Sbjct: 146 LQGLTRLQELDLRRNRVADLTPLARLTELRFLVLSFNQVRDLTPLQGLARLQGLVANHNQ 205
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I + L L L L L N+++ + L L+ L L LS N +T + L +N L
Sbjct: 206 IQTLAPLQHLRALKTLLLSGNQIQDLTPLRPLSALEVLDLSANHVTDLTPLAANAGLGMG 265
Query: 241 DV 242
DV
Sbjct: 266 DV 267
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 188 ASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKI 247
A L L L + +++ LE NLT+L L+ N + + L + E LE L++++N++
Sbjct: 59 ARLADLTQLEASGAGVTSLQGLEHAPNLTRLELAVNRVQDLTPLAALEDLEYLELSFNRV 118
Query: 248 SIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+ + HLT L+ ++ N++ D L+ +LQ + L RN VA
Sbjct: 119 QDLTPLQHLTRLRVLFLRGNRIQDLTP---LQGLTRLQELDLRRNRVA 163
>gi|12054796|emb|CAC20636.1| internalin E [Listeria monocytogenes]
Length = 499
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 75 SVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS 134
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL+ + L I+ + + L L+VL L N+I I L GL+NL+ L G
Sbjct: 135 ALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGST 194
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL-------- 231
++S + LA+L+KL L+ +++ + L L+NLT++YL EN ++ + L
Sbjct: 195 QVSDLTPLANLSKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSI 254
Query: 232 --LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L+N+ + V Y I+ N+ +T L I + +SD T
Sbjct: 255 VTLTNQTITNQPVFYQNKPIVPNV--VTGLSGELIAPDTISDNGT 297
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 4/198 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+GL +L NL +L L N+++ + + +L K+ L L N ++ + L GL NL+ +
Sbjct: 86 ITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTM 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L I+ + LA L+ L +L+L N++ I L L+NL L ++ + L +
Sbjct: 146 DLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL L+ +K+S + + L+ L E ++ +NQ+SD + + L N L + L +
Sbjct: 206 SKLTALNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPN---LSIVTLTNQTI 262
Query: 295 AQDPNYRRKIKLVCPWIV 312
P + + K + P +V
Sbjct: 263 TNQPVFYQN-KPIVPNVV 279
>gi|83629879|gb|ABC26601.1| internalin D [Listeria monocytogenes]
Length = 566
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 132/261 (50%), Gaps = 28/261 (10%)
Query: 49 SKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEIL 108
S+AE + ++V E + I +E + L L L L +N++T + L L L IL
Sbjct: 68 SQAELDSVRDVTAES-----SNIASLEGVQYLNNLDTLVLNNNKITTLNPLAGLTKLSIL 122
Query: 109 DLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGL 168
+ S N++ +I L ++ NL +L L N+I ++ V +L L+ +EL +N+I I + GL
Sbjct: 123 EASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGL 182
Query: 169 TNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTI 228
NL L + NKIS + ++ L+KLN L+ N+ I +L L+NL
Sbjct: 183 KNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQ---ISDLRPLSNL------------- 226
Query: 229 ENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIY 288
+E + + N+IS + IA+L L ++ +NQ+SD +++ L N+ I
Sbjct: 227 ------AAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGIT 280
Query: 289 LDRNPVAQDPNYRRKIKLVCP 309
LD + +P ++ +LV P
Sbjct: 281 LDNQKITSEPVLYQQ-ELVVP 300
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI ++LAN K L + + L ++ + + I +E + L NL+ L
Sbjct: 41 INEIFTDENLANAIKTTLSKPSTASAVSQAELDSVRDVTAESSNIASLEGVQYLNNLDTL 100
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIENL 231
L NKI+ ++ LA LTKL+IL N+L I L +TNL QL L N L + NL
Sbjct: 101 VLNNNKITTLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNL 160
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 161 IN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 205
>gi|16802310|ref|NP_463795.1| internalin E [Listeria monocytogenes EGD-e]
gi|3980136|emb|CAA07458.1| internalin E [Listeria monocytogenes]
gi|16409629|emb|CAD00791.1| internalin E [Listeria monocytogenes EGD-e]
Length = 499
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 75 SVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVS 134
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL+ + L I+ + + L L+VL L N+I I L GL+NL+ L G
Sbjct: 135 ALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGST 194
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL-------- 231
++S + LA+L+KL L+ +++ + L L+NLT++YL EN ++ + L
Sbjct: 195 QVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSI 254
Query: 232 --LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L+N+ + V Y I+ N+ +T L I + +SD T
Sbjct: 255 VTLTNQTITNQPVFYQNKPIVPNV--VTGLSGELIAPDTISDNGT 297
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+GL +L NL +L L N+++ + + +L K+ L L N ++ + L GL NL+ +
Sbjct: 86 ITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTM 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L I+ + LA L+ L +L+L N++ I L L+NL L ++ + L +
Sbjct: 146 DLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL TL+ +K+S + + L+ L E ++ +NQ+SD + + L N L + L +
Sbjct: 206 SKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPN---LSIVTLTNQTI 262
Query: 295 AQDPNYRRKIKLVCPWIV 312
P + + K + P +V
Sbjct: 263 TNQPVFYQN-KPIVPNVV 279
>gi|83629953|gb|ABC26638.1| internalin E [Listeria monocytogenes]
gi|83629959|gb|ABC26641.1| internalin E [Listeria monocytogenes]
gi|83629965|gb|ABC26644.1| internalin E [Listeria monocytogenes]
gi|83629967|gb|ABC26645.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 74 SVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLKNLTKITELRLSGNPLKDVS 133
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL+ + L I+ + + L L+VL L N+I I L GL+NL+ L G
Sbjct: 134 ALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGST 193
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL-------- 231
++S + LA+L+KL L+ +++ + L L+NLT++YL EN ++ + L
Sbjct: 194 QVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSI 253
Query: 232 --LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L+N+ + V Y I+ N+ +T L I + +SD T
Sbjct: 254 VTLTNQTITNQPVFYQNKPIVPNV--VTGLSGELIAPDTISDNGT 296
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+GL +L NL +L L N+++ + + +L K+ L L N ++ + L GL NL+ +
Sbjct: 85 ITTIEGLQYLTNLSELELIDNQVTDLNPLKNLTKITELRLSGNPLKDVSALAGLKNLKTM 144
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L I+ + LA L+ L +L+L N++ I L L+NL L ++ + L +
Sbjct: 145 DLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANL 204
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL TL+ +K+S + + L+ L E ++ +NQ+SD + + L N L + L +
Sbjct: 205 SKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPN---LSIVTLTNQTI 261
Query: 295 AQDPNYRRKIKLVCPWIV 312
P + + K + P +V
Sbjct: 262 TNQPVFYQN-KPIVPNVV 278
>gi|83629963|gb|ABC26643.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 74 SVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLKNLTKITELRLSGNPLKDVS 133
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L NL+ + L I+ + + L L+VL L N+I I L GL+NL+ L G
Sbjct: 134 ALAGLKNLKMMDLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGST 193
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL-------- 231
++S + LA+L+KL L+ +++ + L L+NLT++YL EN ++ + L
Sbjct: 194 QVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSI 253
Query: 232 --LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNT 274
L+N+ + V Y I+ N+ +T L I + +SD T
Sbjct: 254 VTLTNQTITNQPVFYQNKPIVPNV--VTGLSGELIAPDTISDNGT 296
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+GL +L NL +L L N+++ + + +L K+ L L N ++ + L GL NL+ +
Sbjct: 85 ITTIEGLQYLTNLSELELIDNQVTDLNPLKNLTKITELRLSGNPLKDVSALAGLKNLKMM 144
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L I+ + LA L+ L +L+L N++ I L L+NL L ++ + L +
Sbjct: 145 DLIYTDITDVTPLAGLSNLQVLNLDINQITDITPLAGLSNLQFLSFGSTQVSDLTPLANL 204
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL TL+ +K+S + + L+ L E ++ +NQ+SD + + L N L + L +
Sbjct: 205 SKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPN---LSIVTLTNQTI 261
Query: 295 AQDPNYRRKIKLVCPWIV 312
P + + K + P +V
Sbjct: 262 TNQPVFYQN-KPIVPNVV 278
>gi|229114149|ref|ZP_04243570.1| hypothetical protein bcere0017_4510 [Bacillus cereus Rock1-3]
gi|228669169|gb|EEL24590.1| hypothetical protein bcere0017_4510 [Bacillus cereus Rock1-3]
Length = 1006
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 131/231 (56%), Gaps = 4/231 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ +DL+ N I+ I ++ L N+ L
Sbjct: 220 INEIAGLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLENINML 279
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKIS + + +KK+K L+L N I I+ L L+ +++LYL N+IS + + L
Sbjct: 280 FLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQL 339
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ + +L + N++ +E++ ++NL +L ++++ + I L KL+ L++ N IS I
Sbjct: 340 SNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDI 399
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPVAQD 297
+++LT+L E + N+++D V L + Q Q I+L V ++
Sbjct: 400 SPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQKIFLGEASVDEE 450
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 103/182 (56%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N IK I I L + L L DN+++ + L + ++ LDL N I +I+ L L+
Sbjct: 259 LTSNPIKNIHPIEQLENINMLFLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLS 318
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+++LYL +N+IS + ++ L +++L +G+NKI +E++ ++NL EL + ++I I
Sbjct: 319 TMKQLYLANNQISDLTGINQLSNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDIS 378
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L+ L KL +L+L+ N + I L LT+L ++ L N + + + K ++D+
Sbjct: 379 PLSKLGKLQVLNLEENYISDISPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQ 438
Query: 246 KI 247
KI
Sbjct: 439 KI 440
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 108/190 (56%), Gaps = 13/190 (6%)
Query: 111 SFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTN 170
S I EI GL+H+ NLEKL L + ++ I + L+ LK ++L N I+ I ++ L N
Sbjct: 216 SGEGINEIAGLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLEN 275
Query: 171 LEELYLGKNKISRIDNLASLTKL---NILSLQCNRLRTIENLEALTNLTQLYLSENGLT- 226
+ L+L NKIS +L L+K+ L L N + I+ L L+ + QLYL+ N ++
Sbjct: 276 INMLFLRDNKIS---DLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISD 332
Query: 227 -TIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQ 285
T N LSN +E L + NKIS +++I+ ++ L E I D+++ D + ++ L +LQ
Sbjct: 333 LTGINQLSN--VELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKL---GKLQ 387
Query: 286 TIYLDRNPVA 295
+ L+ N ++
Sbjct: 388 VLNLEENYIS 397
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 106/196 (54%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E+L LR + + I I L LK ++L N + I ++ L N+ +L L N+I ++
Sbjct: 232 LEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLENINMLFLRDNKISDLTP 291
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L + ++ L L N I I+ + L +K L L +N+I + ++ L+N+E L++G NK
Sbjct: 292 LSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQLSNVELLWIGNNK 351
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS +++++ ++ L L + + ++ I L L L L L EN ++ I L + L +
Sbjct: 352 ISNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDISPLSNLTDLHEM 411
Query: 241 DVAYNKISIIQNIAHL 256
++ N+I+ ++ + L
Sbjct: 412 NLGANEIADVRPVEEL 427
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 86/148 (58%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK I+ L L N I+ I+ + L+T+K+L L +NQ++ + ++ L N+E+L + N+I
Sbjct: 293 SKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQLSNVELLWIGNNKI 352
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++ + ++NL +L + ++I I + L KL+VL L +N I I L LT+L E+
Sbjct: 353 SNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDISPLSNLTDLHEMN 412
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRL 203
LG N+I+ + + L K + +Q ++
Sbjct: 413 LGANEIADVRPVEELGKRISIDIQRQKI 440
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+L ++ +
Sbjct: 550 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 609
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
N+I I L L NL+ L L N I + + S+ L L+L N I ++ L L
Sbjct: 610 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNE---ICDVRPLIQLG 666
Query: 217 QLYLSENGLTTI 228
Q + + G TI
Sbjct: 667 QWFSIDVGRQTI 678
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 69/118 (58%)
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E++ +K L++L+ +I+ + L+ +TNLE L L + I+ +++L +LNI+++
Sbjct: 550 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 609
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ I L +L NL L L++N + + + S L +L++A N+I ++ + L +
Sbjct: 610 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNEICDVRPLIQLGQ 667
>gi|290892590|ref|ZP_06555583.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|404406720|ref|YP_006689435.1| hypothetical protein LMOSLCC2376_0237 [Listeria monocytogenes
SLCC2376]
gi|290557899|gb|EFD91420.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|404240869|emb|CBY62269.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes SLCC2376]
Length = 505
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 105/185 (56%), Gaps = 3/185 (1%)
Query: 42 SEAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDT 101
S AE ++ A + +K + +L + N I I + LT L +L+L+DNQ+T I +
Sbjct: 104 SNAEVSDISALKDLTK---LTKLEMYQNNISDINVLENLTNLTDLDLHDNQITDISPVRN 160
Query: 102 LINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRI 161
L NL L+L++N+I +I + L+ L KL+ N++S I V L L L LG N+I
Sbjct: 161 LTNLVELNLAYNQISDIGAVSTLSKLNKLWFTDNQVSDISAVAGLNNLSSLSLGYNQISD 220
Query: 162 IENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLS 221
I L LTNL+ L + N++S + +A+LT L + L N++ + + LTNLT++YLS
Sbjct: 221 ISILTNLTNLDGLGIDNNQVSDLTPIANLTNLTYVGLHNNQISDLTPIANLTNLTRMYLS 280
Query: 222 ENGLT 226
+T
Sbjct: 281 NQQIT 285
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 108/203 (53%), Gaps = 3/203 (1%)
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELG 155
IE + L NL L++S + +I L L L KL + N IS I +++L L L+L
Sbjct: 89 IEGIQYLTNLTELNISNAEVSDISALKDLTKLTKLEMYQNNISDINVLENLTNLTDLDLH 148
Query: 156 DNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNL 215
DN+I I + LTNL EL L N+IS I +++L+KLN L N++ I + L NL
Sbjct: 149 DNQITDISPVRNLTNLVELNLAYNQISDIGAVSTLSKLNKLWFTDNQVSDISAVAGLNNL 208
Query: 216 TQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV 275
+ L L N ++ I L + L+ L + N++S + IA+LT L +++NQ+SD +
Sbjct: 209 SSLSLGYNQISDISILTNLTNLDGLGIDNNQVSDLTPIANLTNLTYVGLHNNQISDLTPI 268
Query: 276 NVLENNKQLQTIYLDRNPVAQDP 298
L N L +YL + +P
Sbjct: 269 ANLTN---LTRMYLSNQQITNNP 288
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 101/212 (47%), Gaps = 27/212 (12%)
Query: 70 LIKKIENIHMLTTLKE----------------------LELYDNQLTVIENLDTLINLEI 107
LI IE I LT L E LE+Y N ++ I L+ L NL
Sbjct: 85 LIASIEGIQYLTNLTELNISNAEVSDISALKDLTKLTKLEMYQNNISDINVLENLTNLTD 144
Query: 108 LDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG 167
LDL N+I +I + +L NL +L L N+IS I V L KL L DN++ I + G
Sbjct: 145 LDLHDNQITDISPVRNLTNLVELNLAYNQISDIGAVSTLSKLNKLWFTDNQVSDISAVAG 204
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---G 224
L NL L LG N+IS I L +LT L+ L + N++ + + LTNLT + L N
Sbjct: 205 LNNLSSLSLGYNQISDISILTNLTNLDGLGIDNNQVSDLTPIANLTNLTYVGLHNNQISD 264
Query: 225 LTTIENL--LSNEKLETLDVAYNKISIIQNIA 254
LT I NL L+ L + N I NIA
Sbjct: 265 LTPIANLTNLTRMYLSNQQITNNPIPFHSNIA 296
>gi|217074948|gb|ACJ85834.1| unknown [Medicago truncatula]
gi|388508012|gb|AFK42072.1| unknown [Medicago truncatula]
Length = 468
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 128/239 (53%), Gaps = 3/239 (1%)
Query: 81 TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKI 140
+++ L L L+ + L + LE LDL FN + ++GL L+ L + NK+ +
Sbjct: 19 SSISSLHLTHKALSDVSCLASFNKLEKLDLKFNNLTSLEGLRACVTLKWLSVVENKLESL 78
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E + L KL VL G NK++ ++ + L+ + L L N+I I NL + +LN L L
Sbjct: 79 EGIQGLTKLTVLNAGKNKLKSMDEIGSLSTIRALILNDNEIVSICNLDQMKELNTLVLSK 138
Query: 201 NRLRTI-ENLEALTNLTQLYLSENGLTTIENLLS-NEKLETLDVAYNKI-SIIQNIAHLT 257
N +R I E L+ + ++T+L LS L I+ L +L L +A+N I S+ + + H +
Sbjct: 139 NPIRKIGEALKKVKSITKLSLSHCQLEGIDTSLKFCVELTELRLAHNDIKSLPEELMHNS 198
Query: 258 ELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
+L+ + +N ++ W+ + VL++ +L+ + L NPVA + RKIK P + +A
Sbjct: 199 KLRNLDLGNNVIAKWSDIKVLKSLTKLRNLNLQGNPVATNEKVIRKIKNALPKLQVFNA 257
>gi|357453175|ref|XP_003596864.1| Protein phosphatase 1 regulatory subunit [Medicago truncatula]
gi|355485912|gb|AES67115.1| Protein phosphatase 1 regulatory subunit [Medicago truncatula]
Length = 468
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 128/239 (53%), Gaps = 3/239 (1%)
Query: 81 TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKI 140
+++ L L L+ + L + LE LDL FN + ++GL L+ L + NK+ +
Sbjct: 19 SSISSLHLTHKALSDVSCLASFNKLEKLDLKFNNLTSLEGLRACVTLKWLSVVENKLESL 78
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E + L KL VL G NK++ ++ + L+ + L L N+I I NL + +LN L L
Sbjct: 79 EGIQGLTKLTVLNAGKNKLKSMDEIGSLSTIRALILNDNEIVSICNLDQMKELNTLVLSK 138
Query: 201 NRLRTI-ENLEALTNLTQLYLSENGLTTIENLLS-NEKLETLDVAYNKI-SIIQNIAHLT 257
N +R I E L+ + ++T+L LS L I+ L +L L +A+N I S+ + + H +
Sbjct: 139 NPIRKIGEALKKVKSITKLSLSHCQLEGIDTSLKFCVELTELRLAHNDIKSLPEELMHNS 198
Query: 258 ELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
+L+ + +N ++ W+ + VL++ +L+ + L NPVA + RKIK P + +A
Sbjct: 199 KLRNLDLGNNVIAKWSDIKVLKSLTKLRNLNLQGNPVATNEKVIRKIKNALPKLQVFNA 257
>gi|449533584|ref|XP_004173754.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Cucumis
sativus]
Length = 351
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 128/237 (54%), Gaps = 2/237 (0%)
Query: 82 TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIE 141
T+ L+L L+ I L NLE LDL+FN + ++GL+ NL+ L + NK+ ++
Sbjct: 20 TITTLKLNQKALSDINGLSLFKNLEKLDLTFNNLTSLQGLESCTNLKWLSVVQNKLDNLK 79
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++ L +L VL G NK+R ++ + L L L N+I I L + LN L L N
Sbjct: 80 GIEGLSRLNVLNAGKNKLRSMDEIRPLVGFCALILNDNEIVSICKLDQMKNLNTLVLSRN 139
Query: 202 RLRTI-ENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQN-IAHLTEL 259
+ +I ++L + ++ +L LS +IE+L +L+ L +A+N+I ++ N +AH +L
Sbjct: 140 PIHSIGDSLLKVNSMKKLSLSNCKHQSIESLKFCIELKELRLAHNEIRMLPNALAHNKKL 199
Query: 260 QEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
+ +N + W+ + VL + L+ IY+ NP+A+ +KI + P + ++A
Sbjct: 200 LNLDLGNNVIMRWSDLKVLSSLGYLRNIYVRGNPIAESAKLDKKICRLVPGLRVLNA 256
>gi|423542724|ref|ZP_17519113.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB4-10]
gi|401168220|gb|EJQ75487.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB4-10]
Length = 964
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 129/228 (56%), Gaps = 4/228 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ +DL+ N I+ I ++ L N+ L
Sbjct: 220 INEIAGLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLENINML 279
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKIS + + +KK+K L+L N I I+ L L+ +++LYL N+IS + + L
Sbjct: 280 FLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQL 339
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ + +L + N++ +E++ ++NL +L ++++ + I L KL+ L++ N IS I
Sbjct: 340 SNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDI 399
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPV 294
+++LT+L E + N+++D V L + Q Q I+L V
Sbjct: 400 SPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQKIFLGEASV 447
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 103/182 (56%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N IK I I L + L L DN+++ + L + ++ LDL N I +I+ L L+
Sbjct: 259 LTSNPIKNIHPIEQLENINMLFLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLS 318
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+++LYL +N+IS + ++ L +++L +G+NKI +E++ ++NL EL + ++I I
Sbjct: 319 TMKQLYLANNQISDLTGINQLSNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDIS 378
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L+ L KL +L+L+ N + I L LT+L ++ L N + + + K ++D+
Sbjct: 379 PLSKLGKLQVLNLEENYISDISPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQ 438
Query: 246 KI 247
KI
Sbjct: 439 KI 440
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 108/190 (56%), Gaps = 13/190 (6%)
Query: 111 SFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTN 170
S I EI GL+H+ NLEKL L + ++ I + L+ LK ++L N I+ I ++ L N
Sbjct: 216 SGEGINEIAGLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLEN 275
Query: 171 LEELYLGKNKISRIDNLASLTKL---NILSLQCNRLRTIENLEALTNLTQLYLSENGLT- 226
+ L+L NKIS +L L+K+ L L N + I+ L L+ + QLYL+ N ++
Sbjct: 276 INMLFLRDNKIS---DLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISD 332
Query: 227 -TIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQ 285
T N LSN +E L + NKIS +++I+ ++ L E I D+++ D + ++ L +LQ
Sbjct: 333 LTGINQLSN--VELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKL---GKLQ 387
Query: 286 TIYLDRNPVA 295
+ L+ N ++
Sbjct: 388 VLNLEENYIS 397
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 106/196 (54%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E+L LR + + I I L LK ++L N + I ++ L N+ +L L N+I ++
Sbjct: 232 LEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLENINMLFLRDNKISDLTP 291
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L + ++ L L N I I+ + L +K L L +N+I + ++ L+N+E L++G NK
Sbjct: 292 LSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQLSNVELLWIGNNK 351
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS +++++ ++ L L + + ++ I L L L L L EN ++ I L + L +
Sbjct: 352 ISNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDISPLSNLTDLHEM 411
Query: 241 DVAYNKISIIQNIAHL 256
++ N+I+ ++ + L
Sbjct: 412 NLGANEIADVRPVEEL 427
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 86/148 (58%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK I+ L L N I+ I+ + L+T+K+L L +NQ++ + ++ L N+E+L + N+I
Sbjct: 293 SKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQLSNVELLWIGNNKI 352
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++ + ++NL +L + ++I I + L KL+VL L +N I I L LT+L E+
Sbjct: 353 SNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDISPLSNLTDLHEMN 412
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRL 203
LG N+I+ + + L K + +Q ++
Sbjct: 413 LGANEIADVRPVEELGKRISIDIQRQKI 440
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+L ++ +
Sbjct: 550 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 609
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
N+I I L L NL+ L L N I + + S+ L L+L N I ++ L L
Sbjct: 610 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNE---ICDVRPLIQLG 666
Query: 217 QLYLSENGLTTI 228
Q + + G TI
Sbjct: 667 QWFSIDVGRQTI 678
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 69/118 (58%)
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E++ +K L++L+ +I+ + L+ +TNLE L L + I+ +++L +LNI+++
Sbjct: 550 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 609
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ I L +L NL L L++N + + + S L +L++A N+I ++ + L +
Sbjct: 610 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNEICDVRPLIQLGQ 667
>gi|449534094|ref|XP_004174003.1| PREDICTED: protein phosphatase 1 regulatory subunit 7-like, partial
[Cucumis sativus]
Length = 255
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 126/232 (54%), Gaps = 2/232 (0%)
Query: 82 TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIE 141
T+ L+L L+ I L NLE LDL+FN + ++GL+ NL+ L + NK+ ++
Sbjct: 20 TITTLKLNQKALSDINGLSLFKNLEKLDLTFNNLTSLQGLESCTNLKWLSVVQNKLDNLK 79
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++ L +L VL G NK+R ++ + L L L N+I+ I L + LN L L N
Sbjct: 80 GIEGLSRLNVLNAGKNKLRSMDEIRPLVGFCALILNDNEIASICKLDQMKNLNTLVLSRN 139
Query: 202 RLRTI-ENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQN-IAHLTEL 259
+ +I ++L + ++ +L LS +IE+L +L+ L +A+N+I ++ N +AH +L
Sbjct: 140 PIHSIGDSLLKVNSMKKLSLSNCKHQSIESLKFCIELKELRLAHNEIRMLPNALAHNKKL 199
Query: 260 QEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWI 311
+ +N + W+ + VL + L+ IY+ NP+A+ +KI + P +
Sbjct: 200 LNLDLGNNVIMRWSDLKVLSSLGYLRNIYVRGNPIAESAKLDKKICRLVPGL 251
>gi|328781792|ref|XP_397479.4| PREDICTED: leucine-rich repeat-containing protein 49-like [Apis
mellifera]
Length = 984
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 119/221 (53%), Gaps = 22/221 (9%)
Query: 20 LNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKE-VCIER--------------- 63
N+E + N ++L E T + +E E++ + +C++R
Sbjct: 96 FNIEYDKVNGSNSVNLQWTSEGKTVMATRTASEKEKNPDRICLDRRGLTSFPNIIGEPRL 155
Query: 64 --LLLRWNLIKKIENIHML--TTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
L L+ NL+ KIEN + L T L L+LYDNQ+ I N + L NL +L + NRI+ I+
Sbjct: 156 RLLSLQHNLLTKIENCNFLQLTKLVFLDLYDNQIERICNFEILENLRVLLIGKNRIKRIE 215
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLD--GLTNLEELYLG 177
GL+HL+ LE L L N+I +I ++++L LKVL L N I+II + D GLT+L+EL L
Sbjct: 216 GLNHLSKLEVLDLHGNQIVQISDLNNLISLKVLNLAGNNIKIIGHNDFQGLTSLKELNLR 275
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
+NKI ++ +L L L N + IE++ L QL
Sbjct: 276 RNKIKKLLGFDETRQLQKLYLSNNDIHKIEDIGNLAKALQL 316
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 10/192 (5%)
Query: 119 KGLDHLAN------LEKLYLCSNKISKIENVDHLK--KLKVLELGDNKIRIIENLDGLTN 170
+GL N L L L N ++KIEN + L+ KL L+L DN+I I N + L N
Sbjct: 141 RGLTSFPNIIGEPRLRLLSLQHNLLTKIENCNFLQLTKLVFLDLYDNQIERICNFEILEN 200
Query: 171 LEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIEN 230
L L +GKN+I RI+ L L+KL +L L N++ I +L L +L L L+ N + I +
Sbjct: 201 LRVLLIGKNRIKRIEGLNHLSKLEVLDLHGNQIVQISDLNNLISLKVLNLAGNNIKIIGH 260
Query: 231 --LLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIY 288
L+ L++ NKI + +LQ+ ++++N + + L QL+ I
Sbjct: 261 NDFQGLTSLKELNLRRNKIKKLLGFDETRQLQKLYLSNNDIHKIEDIGNLAKALQLREIT 320
Query: 289 LDRNPVAQDPNY 300
+D NP+ + +Y
Sbjct: 321 IDGNPITLNGDY 332
>gi|348677622|gb|EGZ17439.1| hypothetical protein PHYSODRAFT_501149 [Phytophthora sojae]
Length = 614
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 137/255 (53%), Gaps = 8/255 (3%)
Query: 68 WNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA-- 125
+N I + N+ L+EL++Y+N+LT L NLE L ++ N+I EI D LA
Sbjct: 58 FNKITSLRNVSTARELRELKIYNNKLTNTIGLKANSNLEGLQMNDNQIEEISS-DFLALG 116
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIR--IIENLDGLTNLEELYLGKNKISR 183
L+ L+L N+I+ ++N+ + L L+LG N+++ E LD LTNL+ L L N++S
Sbjct: 117 RLKNLWLNGNRIASVQNLRGCRLLVHLDLGRNRLQGAASEGLDALTNLKHLNLAGNELSS 176
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN-EKLETLDV 242
NLA LTKL L+L N+L +++ + NL L ++ N ++ + + + EKL L
Sbjct: 177 GGNLAYLTKLEELNLSENKLTSLQGIMP-PNLLVLRVNGNQISDFQGMATPLEKLNELYA 235
Query: 243 AYNKISIIQNIA-HLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYR 301
N I I+++ +L+ + +NQ++ + + +L + LQ I+L NP +Y
Sbjct: 236 HDNMIVDIESLPTRCPQLESVDLRNNQIASCSQIGILATCEGLQDIWLQGNPCCYSSSYL 295
Query: 302 RKIKLVCPWIVQIDA 316
+ P + +DA
Sbjct: 296 IDVMSALPELKTLDA 310
>gi|423099328|ref|ZP_17087035.1| repeat protein [Listeria innocua ATCC 33091]
gi|370794226|gb|EHN62008.1| repeat protein [Listeria innocua ATCC 33091]
Length = 505
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 104/185 (56%), Gaps = 3/185 (1%)
Query: 42 SEAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDT 101
S AE ++ A + +K + +L + N I I + LT + +L+L+DNQ+ I +
Sbjct: 104 SNAEVSDISALKDLTK---LTKLEMYQNNISDINVLENLTNITDLDLHDNQIADISPVRN 160
Query: 102 LINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRI 161
L NL L+L++N+I +I + L+ L KL+ N++S I V L L L LG N+I
Sbjct: 161 LTNLVELNLAYNQISDISAVSTLSKLNKLWFTDNQVSDISAVAGLNNLSSLSLGYNQISD 220
Query: 162 IENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLS 221
I L LTNL+ L + N+IS + +A+LT L + L N++ + + LTNLT++YLS
Sbjct: 221 ISILTNLTNLDGLSIDHNQISDLTPIANLTNLTFVGLHNNQISDLTPIANLTNLTRMYLS 280
Query: 222 ENGLT 226
+T
Sbjct: 281 GQQIT 285
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 4/212 (1%)
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELG 155
IE + L NL L++S + +I L L L KL + N IS I +++L + L+L
Sbjct: 89 IEGIQYLTNLTELNISNAEVSDISALKDLTKLTKLEMYQNNISDINVLENLTNITDLDLH 148
Query: 156 DNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNL 215
DN+I I + LTNL EL L N+IS I +++L+KLN L N++ I + L NL
Sbjct: 149 DNQIADISPVRNLTNLVELNLAYNQISDISAVSTLSKLNKLWFTDNQVSDISAVAGLNNL 208
Query: 216 TQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV 275
+ L L N ++ I L + L+ L + +N+IS + IA+LT L +++NQ+SD +
Sbjct: 209 SSLSLGYNQISDISILTNLTNLDGLSIDHNQISDLTPIANLTNLTFVGLHNNQISDLTPI 268
Query: 276 NVLENNKQLQTIYLDRNPVAQDP-NYRRKIKL 306
L N L +YL + +P Y I +
Sbjct: 269 ANLTN---LTRMYLSGQQITNNPIPYHSNIAI 297
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 105/217 (48%), Gaps = 28/217 (12%)
Query: 66 LRWNL-IKKIENIHMLTTLKE----------------------LELYDNQLTVIENLDTL 102
LR NL I IE I LT L E LE+Y N ++ I L+ L
Sbjct: 80 LRSNLPIASIEGIQYLTNLTELNISNAEVSDISALKDLTKLTKLEMYQNNISDINVLENL 139
Query: 103 INLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII 162
N+ LDL N+I +I + +L NL +L L N+IS I V L KL L DN++ I
Sbjct: 140 TNITDLDLHDNQIADISPVRNLTNLVELNLAYNQISDISAVSTLSKLNKLWFTDNQVSDI 199
Query: 163 ENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSE 222
+ GL NL L LG N+IS I L +LT L+ LS+ N++ + + LTNLT + L
Sbjct: 200 SAVAGLNNLSSLSLGYNQISDISILTNLTNLDGLSIDHNQISDLTPIANLTNLTFVGLHN 259
Query: 223 N---GLTTIENL--LSNEKLETLDVAYNKISIIQNIA 254
N LT I NL L+ L + N I NIA
Sbjct: 260 NQISDLTPIANLTNLTRMYLSGQQITNNPIPYHSNIA 296
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 92/166 (55%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L + + ++S I + L KL LE+ N I I L+ LTN+ +L
Sbjct: 86 IASIEGIQYLTNLTELNISNAEVSDISALKDLTKLTKLEMYQNNISDINVLENLTNITDL 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N+I+ I + +LT L L+L N++ I + L+ L +L+ ++N ++ I +
Sbjct: 146 DLHDNQIADISPVRNLTNLVELNLAYNQISDISAVSTLSKLNKLWFTDNQVSDISAVAGL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
L +L + YN+IS I + +LT L I+ NQ+SD + L N
Sbjct: 206 NNLSSLSLGYNQISDISILTNLTNLDGLSIDHNQISDLTPIANLTN 251
>gi|255523032|ref|ZP_05390004.1| leucine-rich repeat protein [Clostridium carboxidivorans P7]
gi|255513147|gb|EET89415.1| leucine-rich repeat protein [Clostridium carboxidivorans P7]
Length = 676
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 137/280 (48%), Gaps = 22/280 (7%)
Query: 20 LNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKEV-CIERLLLRWNLIKKIENIH 78
NV+ N+ G D E+ + E + D +V I L + N IK I
Sbjct: 118 FNVKRKPNSGGIVTFKDKSLEQEIRDEIEKPSGDIYQSDVDYITELYMANNKIKDFSGIE 177
Query: 79 MLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKIS 138
LT LK+L L ++++ I L L+ L+ +DLS+N+I +I L +L NL+KL L +NK+
Sbjct: 178 NLTNLKQLNLRESEINDISELKNLVKLQSIDLSYNKISDISALKNLTNLKKLNLGNNKVR 237
Query: 139 KIENVDHLKKLKVLELG---------------DNKIRIIENLDGLTNLEELYLGKNKISR 183
I + L L+ L LG N+I I L LTNL+ L LG KI
Sbjct: 238 DISVLSKLTNLQELNLGYIPYHDFETPDPEANYNEISDISALKNLTNLQTLNLGYTKIKD 297
Query: 184 IDNLASLTKLNILSLQCNRLRTIEN----LEALTNLTQLYLSENGLTTIENLLSNEKLET 239
++ L L L L L N++ I + L+ LT+L L LS N ++ I+ L L+
Sbjct: 298 LNALKGLNNLKTLDLSGNQISDISSIVNVLKELTSLNDLNLSTNEISNIDELNKLTSLKM 357
Query: 240 LDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
L + NKIS I + L+ LQ ++ NQ+SD T N L+
Sbjct: 358 LKLNSNKISNINRLKGLSNLQTLDLSSNQISD--TANTLK 395
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 113/209 (54%), Gaps = 5/209 (2%)
Query: 68 WNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG----LDH 123
+N I I + LT L+ L L ++ + L L NL+ LDLS N+I +I L
Sbjct: 270 YNEISDISALKNLTNLQTLNLGYTKIKDLNALKGLNNLKTLDLSGNQISDISSIVNVLKE 329
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L +L L L +N+IS I+ ++ L LK+L+L NKI I L GL+NL+ L L N+IS
Sbjct: 330 LTSLNDLNLSTNEISNIDELNKLTSLKMLKLNSNKISNINRLKGLSNLQTLDLSSNQISD 389
Query: 184 IDN-LASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDV 242
N L L LN L+L N++ I L LTNL L L N ++ I L L+ +D+
Sbjct: 390 TANTLKELNNLNDLNLSNNQISNIGELNKLTNLKALNLYYNKISDISALKGLSNLQMIDL 449
Query: 243 AYNKISIIQNIAHLTELQEFWINDNQVSD 271
+YN+IS I +L L+E + N +SD
Sbjct: 450 SYNEISDISVFENLANLRELILLSNPISD 478
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 25/187 (13%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKIS- 138
LT+L +L L N+++ I+ L+ L +L++L L+ N+I I L L+NL+ L L SN+IS
Sbjct: 330 LTSLNDLNLSTNEISNIDELNKLTSLKMLKLNSNKISNINRLKGLSNLQTLDLSSNQISD 389
Query: 139 -------------------KIENVDHLKKL---KVLELGDNKIRIIENLDGLTNLEELYL 176
+I N+ L KL K L L NKI I L GL+NL+ + L
Sbjct: 390 TANTLKELNNLNDLNLSNNQISNIGELNKLTNLKALNLYYNKISDISALKGLSNLQMIDL 449
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTN-LTQLYLSENGLTTIENLLSNE 235
N+IS I +L L L L N + ++ ++AL N L Q +++E + L +
Sbjct: 450 SYNEISDISVFENLANLRELILLSNPISDVD-IQALKNALPQCHINEIPVKKPNIYLYPQ 508
Query: 236 KLETLDV 242
K E L V
Sbjct: 509 KTEELSV 515
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 23/143 (16%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIRE-------- 117
L N I I+ ++ LT+LK L+L N+++ I L L NL+ LDLS N+I +
Sbjct: 338 LSTNEISNIDELNKLTSLKMLKLNSNKISNINRLKGLSNLQTLDLSSNQISDTANTLKEL 397
Query: 118 ---------------IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII 162
I L+ L NL+ L L NKIS I + L L++++L N+I I
Sbjct: 398 NNLNDLNLSNNQISNIGELNKLTNLKALNLYYNKISDISALKGLSNLQMIDLSYNEISDI 457
Query: 163 ENLDGLTNLEELYLGKNKISRID 185
+ L NL EL L N IS +D
Sbjct: 458 SVFENLANLRELILLSNPISDVD 480
>gi|423381480|ref|ZP_17358764.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG1O-2]
gi|401629741|gb|EJS47553.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG1O-2]
Length = 1003
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 131/231 (56%), Gaps = 4/231 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ +DL+ N I+ I ++ L N+ L
Sbjct: 231 INEIAGLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLENINML 290
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKIS + + +KK+K L+L N I I+ L L+ +++LYL N+IS + + L
Sbjct: 291 FLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQL 350
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ + +L + N++ +E++ ++NL +L ++++ + I L KL+ L++ N IS I
Sbjct: 351 SNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDI 410
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPVAQD 297
+++LT+L E + N+++D V L + Q Q I+L V ++
Sbjct: 411 SPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQKIFLGEASVDEE 461
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 103/182 (56%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N IK I I L + L L DN+++ + L + ++ LDL N I +I+ L L+
Sbjct: 270 LTSNPIKNIHPIEQLENINMLFLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLS 329
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+++LYL +N+IS + ++ L +++L +G+NKI +E++ ++NL EL + ++I I
Sbjct: 330 TMKQLYLANNQISDLTGINQLSNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDIS 389
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L+ L KL +L+L+ N + I L LT+L ++ L N + + + K ++D+
Sbjct: 390 PLSKLGKLQVLNLEENYISDISPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQ 449
Query: 246 KI 247
KI
Sbjct: 450 KI 451
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 108/190 (56%), Gaps = 13/190 (6%)
Query: 111 SFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTN 170
S I EI GL+H+ NLEKL L + ++ I + L+ LK ++L N I+ I ++ L N
Sbjct: 227 SGEGINEIAGLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLEN 286
Query: 171 LEELYLGKNKISRIDNLASLTKL---NILSLQCNRLRTIENLEALTNLTQLYLSENGLT- 226
+ L+L NKIS +L L+K+ L L N + I+ L L+ + QLYL+ N ++
Sbjct: 287 INMLFLRDNKIS---DLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISD 343
Query: 227 -TIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQ 285
T N LSN +E L + NKIS +++I+ ++ L E I D+++ D + ++ L +LQ
Sbjct: 344 LTGINQLSN--VELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKL---GKLQ 398
Query: 286 TIYLDRNPVA 295
+ L+ N ++
Sbjct: 399 VLNLEENYIS 408
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 86/148 (58%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK I+ L L N I+ I+ + L+T+K+L L +NQ++ + ++ L N+E+L + N+I
Sbjct: 304 SKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQLSNVELLWIGNNKI 363
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++ + ++NL +L + ++I I + L KL+VL L +N I I L LT+L E+
Sbjct: 364 SNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDISPLSNLTDLHEMN 423
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRL 203
LG N+I+ + + L K + +Q ++
Sbjct: 424 LGANEIADVRPVEELGKRISIDIQRQKI 451
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+L ++ +
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 620
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
N+I I L L NL+ L L N I + + S+ L L+L N I ++ L L
Sbjct: 621 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNE---ICDVRPLIQLG 677
Query: 217 QLYLSENGLTTI 228
Q + + G TI
Sbjct: 678 QWFSIDVGRQTI 689
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 69/118 (58%)
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E++ +K L++L+ +I+ + L+ +TNLE L L + I+ +++L +LNI+++
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 620
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ I L +L NL L L++N + + + S L +L++A N+I ++ + L +
Sbjct: 621 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNEICDVRPLIQLGQ 678
>gi|423450497|ref|ZP_17427375.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG5O-1]
gi|401124882|gb|EJQ32643.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG5O-1]
Length = 975
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 131/231 (56%), Gaps = 4/231 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ +DL+ N I+ I ++ L N+ L
Sbjct: 231 INEIAGLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLENINML 290
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKIS + + +KK+K L+L N I I+ L L+ +++LYL N+IS + + L
Sbjct: 291 FLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQL 350
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ + +L + N++ +E++ ++NL +L ++++ + I L KL+ L++ N IS I
Sbjct: 351 SNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDI 410
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPVAQD 297
+++LT+L E + N+++D V L + Q Q I+L V ++
Sbjct: 411 SPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQKIFLGEASVDEE 461
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 103/182 (56%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N IK I I L + L L DN+++ + L + ++ LDL N I +I+ L L+
Sbjct: 270 LTSNPIKNIHPIEQLENINMLFLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLS 329
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+++LYL +N+IS + ++ L +++L +G+NKI +E++ ++NL EL + ++I I
Sbjct: 330 TMKQLYLANNQISDLTGINQLSNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDIS 389
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L+ L KL +L+L+ N + I L LT+L ++ L N + + + K ++D+
Sbjct: 390 PLSKLGKLQVLNLEENYISDISPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQ 449
Query: 246 KI 247
KI
Sbjct: 450 KI 451
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 108/190 (56%), Gaps = 13/190 (6%)
Query: 111 SFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTN 170
S I EI GL+H+ NLEKL L + ++ I + L+ LK ++L N I+ I ++ L N
Sbjct: 227 SGEGINEIAGLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLEN 286
Query: 171 LEELYLGKNKISRIDNLASLTKL---NILSLQCNRLRTIENLEALTNLTQLYLSENGLT- 226
+ L+L NKIS +L L+K+ L L N + I+ L L+ + QLYL+ N ++
Sbjct: 287 INMLFLRDNKIS---DLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISD 343
Query: 227 -TIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQ 285
T N LSN +E L + NKIS +++I+ ++ L E I D+++ D + ++ L +LQ
Sbjct: 344 LTGINQLSN--VELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKL---GKLQ 398
Query: 286 TIYLDRNPVA 295
+ L+ N ++
Sbjct: 399 VLNLEENYIS 408
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 106/196 (54%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E+L LR + + I I L LK ++L N + I ++ L N+ +L L N+I ++
Sbjct: 243 LEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLENINMLFLRDNKISDLTP 302
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L + ++ L L N I I+ + L +K L L +N+I + ++ L+N+E L++G NK
Sbjct: 303 LSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQLSNVELLWIGNNK 362
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS +++++ ++ L L + + ++ I L L L L L EN ++ I L + L +
Sbjct: 363 ISNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDISPLSNLTDLHEM 422
Query: 241 DVAYNKISIIQNIAHL 256
++ N+I+ ++ + L
Sbjct: 423 NLGANEIADVRPVEEL 438
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 86/148 (58%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK I+ L L N I+ I+ + L+T+K+L L +NQ++ + ++ L N+E+L + N+I
Sbjct: 304 SKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQLSNVELLWIGNNKI 363
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++ + ++NL +L + ++I I + L KL+VL L +N I I L LT+L E+
Sbjct: 364 SNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDISPLSNLTDLHEMN 423
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRL 203
LG N+I+ + + L K + +Q ++
Sbjct: 424 LGANEIADVRPVEELGKRISIDIQRQKI 451
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+L ++ +
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 620
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
N+I I L L NL+ L L N I + + S+ L L+L N I ++ L L
Sbjct: 621 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNE---ICDVRPLIQLG 677
Query: 217 QLYLSENGLTTI 228
Q + + G TI
Sbjct: 678 QWFSIDVGRQTI 689
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 69/118 (58%)
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E++ +K L++L+ +I+ + L+ +TNLE L L + I+ +++L +LNI+++
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 620
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ I L +L NL L L++N + + + S L +L++A N+I ++ + L +
Sbjct: 621 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNEICDVRPLIQLGQ 678
>gi|422411636|ref|ZP_16488595.1| internalin A, partial [Listeria innocua FSL S4-378]
gi|313620890|gb|EFR92078.1| internalin A [Listeria innocua FSL S4-378]
Length = 409
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 104/185 (56%), Gaps = 3/185 (1%)
Query: 42 SEAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDT 101
S AE ++ A + +K + +L + N I I + LT + +L+L+DNQ+ I +
Sbjct: 89 SNAEVSDISALKDLTK---LTKLEMYQNNISDINVLENLTNITDLDLHDNQIADISPVRN 145
Query: 102 LINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRI 161
L NL L+L++N+I +I + L+ L KL+ N++S I V L L L LG N+I
Sbjct: 146 LTNLVELNLAYNQISDISAVSTLSKLNKLWFTDNQVSDISAVAGLNNLSSLSLGYNQISD 205
Query: 162 IENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLS 221
I L LTNL+ L + N+IS + +A+LT L + L N++ + + LTNLT++YLS
Sbjct: 206 ISILTNLTNLDGLSIDHNQISDLTPIANLTNLTFVGLHNNQISDLTPIANLTNLTRMYLS 265
Query: 222 ENGLT 226
+T
Sbjct: 266 GQQIT 270
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 4/212 (1%)
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELG 155
IE + L NL L++S + +I L L L KL + N IS I +++L + L+L
Sbjct: 74 IEGIQYLTNLTELNISNAEVSDISALKDLTKLTKLEMYQNNISDINVLENLTNITDLDLH 133
Query: 156 DNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNL 215
DN+I I + LTNL EL L N+IS I +++L+KLN L N++ I + L NL
Sbjct: 134 DNQIADISPVRNLTNLVELNLAYNQISDISAVSTLSKLNKLWFTDNQVSDISAVAGLNNL 193
Query: 216 TQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV 275
+ L L N ++ I L + L+ L + +N+IS + IA+LT L +++NQ+SD +
Sbjct: 194 SSLSLGYNQISDISILTNLTNLDGLSIDHNQISDLTPIANLTNLTFVGLHNNQISDLTPI 253
Query: 276 NVLENNKQLQTIYLDRNPVAQDP-NYRRKIKL 306
L N L +YL + +P Y I +
Sbjct: 254 ANLTN---LTRMYLSGQQITNNPIPYHSNIAI 282
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 105/217 (48%), Gaps = 28/217 (12%)
Query: 66 LRWNL-IKKIENIHMLTTLKE----------------------LELYDNQLTVIENLDTL 102
LR NL I IE I LT L E LE+Y N ++ I L+ L
Sbjct: 65 LRSNLPIASIEGIQYLTNLTELNISNAEVSDISALKDLTKLTKLEMYQNNISDINVLENL 124
Query: 103 INLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII 162
N+ LDL N+I +I + +L NL +L L N+IS I V L KL L DN++ I
Sbjct: 125 TNITDLDLHDNQIADISPVRNLTNLVELNLAYNQISDISAVSTLSKLNKLWFTDNQVSDI 184
Query: 163 ENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSE 222
+ GL NL L LG N+IS I L +LT L+ LS+ N++ + + LTNLT + L
Sbjct: 185 SAVAGLNNLSSLSLGYNQISDISILTNLTNLDGLSIDHNQISDLTPIANLTNLTFVGLHN 244
Query: 223 N---GLTTIENL--LSNEKLETLDVAYNKISIIQNIA 254
N LT I NL L+ L + N I NIA
Sbjct: 245 NQISDLTPIANLTNLTRMYLSGQQITNNPIPYHSNIA 281
>gi|229095201|ref|ZP_04226193.1| hypothetical protein bcere0020_4580 [Bacillus cereus Rock3-29]
gi|228688060|gb|EEL41946.1| hypothetical protein bcere0020_4580 [Bacillus cereus Rock3-29]
Length = 866
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 129/228 (56%), Gaps = 4/228 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ +DL+ N I+ I ++ L N+ L
Sbjct: 220 INEIAGLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLENINML 279
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKIS + + +KK+K L+L N I I+ L L+ +++LYL N+IS + + L
Sbjct: 280 FLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQL 339
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ + +L + N++ +E++ ++NL +L ++++ + I L KL+ L++ N IS I
Sbjct: 340 SNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDI 399
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPV 294
+++LT+L E + N+++D V L + Q Q I+L V
Sbjct: 400 SPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQKIFLGEASV 447
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 103/182 (56%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N IK I I L + L L DN+++ + L + ++ LDL N I +I+ L L+
Sbjct: 259 LTSNPIKNIHPIEQLENINMLFLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLS 318
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+++LYL +N+IS + ++ L +++L +G+NKI +E++ ++NL EL + ++I I
Sbjct: 319 TMKQLYLANNQISDLTGINQLSNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDIS 378
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L+ L KL +L+L+ N + I L LT+L ++ L N + + + K ++D+
Sbjct: 379 PLSKLGKLQVLNLEENYISDISPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQ 438
Query: 246 KI 247
KI
Sbjct: 439 KI 440
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 105/188 (55%), Gaps = 9/188 (4%)
Query: 111 SFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTN 170
S I EI GL+H+ NLEKL L + ++ I + L+ LK ++L N I+ I ++ L N
Sbjct: 216 SGEGINEIAGLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLEN 275
Query: 171 LEELYLGKNKISRIDNLASLTKL---NILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
+ L+L NKIS +L L+K+ L L N + I+ L L+ + QLYL+ N ++
Sbjct: 276 INMLFLRDNKIS---DLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISD 332
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ + +E L + NKIS +++I+ ++ L E I D+++ D + ++ L +LQ +
Sbjct: 333 LTGINQLSNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKL---GKLQVL 389
Query: 288 YLDRNPVA 295
L+ N ++
Sbjct: 390 NLEENYIS 397
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 86/148 (58%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK I+ L L N I+ I+ + L+T+K+L L +NQ++ + ++ L N+E+L + N+I
Sbjct: 293 SKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQLSNVELLWIGNNKI 352
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++ + ++NL +L + ++I I + L KL+VL L +N I I L LT+L E+
Sbjct: 353 SNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDISPLSNLTDLHEMN 412
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRL 203
LG N+I+ + + L K + +Q ++
Sbjct: 413 LGANEIADVRPVEELGKRISIDIQRQKI 440
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+L ++ +
Sbjct: 550 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 609
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
N+I I L L NL+ L L N I + + S+ L L+L N I ++ L L
Sbjct: 610 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNE---ICDVRPLIQLG 666
Query: 217 QLYLSENGLTTI 228
Q + + G TI
Sbjct: 667 QWFSIDVGRQTI 678
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 69/118 (58%)
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E++ +K L++L+ +I+ + L+ +TNLE L L + I+ +++L +LNI+++
Sbjct: 550 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 609
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ I L +L NL L L++N + + + S L +L++A N+I ++ + L +
Sbjct: 610 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNEICDVRPLIQLGQ 667
>gi|83629895|gb|ABC26609.1| internalin D [Listeria monocytogenes]
Length = 566
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 23/239 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +E + L L L L +N++T + L L L IL+ S N++ +I L ++ NL +L
Sbjct: 85 IASLEGVQYLNNLDTLVLNNNKITTLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQL 144
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+I ++ V +L L+ +EL +N+I I + GL NL L + NKIS + ++ L
Sbjct: 145 RLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGL 204
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+KLN L+ N+ I +L L+NL +E + + N+IS +
Sbjct: 205 SKLNHLTADSNQ---ISDLRPLSNL-------------------AAMEVMRLDGNQISDV 242
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
IA+L L ++ +NQ+SD +++ L N+ I LD + +P ++ +LV P
Sbjct: 243 TPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 300
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 96/171 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L+L N I + + LT L LE +NQL+ I L + NL L L N+I+++ G
Sbjct: 97 LDTLVLNNNKITTLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNG 156
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ +L NLE + L +N+I+ I V LK L L + +NKI + + GL+ L L N+
Sbjct: 157 VSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQ 216
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
IS + L++L + ++ L N++ + + L NL ++L+EN ++ I +L
Sbjct: 217 ISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSL 267
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI ++LAN K L + + L ++ + + I +E + L NL+ L
Sbjct: 41 INEIFTDENLANAIKTTLSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYLNNLDTL 100
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIENL 231
L NKI+ ++ LA LTKL+IL N+L I L +TNL QL L N L + NL
Sbjct: 101 VLNNNKITTLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNL 160
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 161 IN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 205
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINL--------EILDLS- 111
+ +L L N IK++ + L L+ +EL +NQ+T I + L NL +I DLS
Sbjct: 141 LHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSP 200
Query: 112 -------------FNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
N+I +++ L +LA +E + L N+IS + + +L L + L +N+
Sbjct: 201 ISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQ 260
Query: 159 IRIIENLDGLTNLEELY 175
I I +L L N +
Sbjct: 261 ISDISSLQPLFNSPNFF 277
>gi|423455897|ref|ZP_17432750.1| hypothetical protein IEE_04641, partial [Bacillus cereus BAG5X1-1]
gi|401133580|gb|EJQ41207.1| hypothetical protein IEE_04641, partial [Bacillus cereus BAG5X1-1]
Length = 803
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 125/228 (54%), Gaps = 4/228 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T+L++L L ++ +T I + L L+ LDLS N I I+ + L NL+ L
Sbjct: 233 INEIAGLEYMTSLEKLTLRESNVTDISAISELRYLKFLDLSSNPIESIQPVSKLENLDML 292
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKI+ + + +KK+K L+L N I+ + L +++L+E+YL N+IS + + L
Sbjct: 293 FLRDNKIADLTPLSQMKKIKTLDLIGNNIKDLTPLFTVSSLKEVYLANNQISNLSGIEKL 352
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ +L + N++ +E + ++NL +L ++++ + I L KL+ L++ N IS I
Sbjct: 353 KNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDI 412
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPV 294
+ LT L E + N++ D V L + Q Q I+LD V
Sbjct: 413 SALGELTNLHEVNLAANEIFDIRPVQELGKRIWIDIQRQKIFLDEASV 460
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 95/158 (60%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I+ I+ + L L L L DN++ + L + ++ LDL N I+++ L ++
Sbjct: 272 LSSNPIESIQPVSKLENLDMLFLRDNKIADLTPLSQMKKIKTLDLIGNNIKDLTPLFTVS 331
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+L+++YL +N+IS + ++ LK +K+L +G+NKI +E + ++NL EL + ++I I
Sbjct: 332 SLKEVYLANNQISNLSGIEKLKNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDIS 391
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
L+ L KL +L+L+ N + I L LTNL ++ L+ N
Sbjct: 392 PLSKLGKLQVLNLEENYISDISALGELTNLHEVNLAAN 429
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 85/152 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N I + + + +K L+L N + + L T+ +L+ + L+ N+I + G
Sbjct: 289 LDMLFLRDNKIADLTPLSQMKKIKTLDLIGNNIKDLTPLFTVSSLKEVYLANNQISNLSG 348
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
++ L N++ L++ +NKIS +E + + L LE+ D++I+ I L L L+ L L +N
Sbjct: 349 IEKLKNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENY 408
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEAL 212
IS I L LT L+ ++L N + I ++ L
Sbjct: 409 ISDISALGELTNLHEVNLAANEIFDIRPVQEL 440
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 82/143 (57%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I+ L L N IK + + +++LKE+ L +NQ++ + ++ L N+++L + N+I +++
Sbjct: 311 IKTLDLIGNNIKDLTPLFTVSSLKEVYLANNQISNLSGIEKLKNVKLLWIGNNKISDVEP 370
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ ++NL +L + ++I I + L KL+VL L +N I I L LTNL E+ L N+
Sbjct: 371 ISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDISALGELTNLHEVNLAANE 430
Query: 181 ISRIDNLASLTKLNILSLQCNRL 203
I I + L K + +Q ++
Sbjct: 431 IFDIRPVQELGKRIWIDIQRQKI 453
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+ + NLE L L + IE + +LK+L + +
Sbjct: 563 EDLLQIKTLEILKEKGKEIKDVTGLESMVNLENLTLEGVGLKNIEFISNLKQLNAMNVSH 622
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
N+I I L L NL+ L L N++ + L S+ L L L N +R + L
Sbjct: 623 NQIEDITPLSLLKNLQWLNLADNRVKDVSVLGSMLDLISLKLAGNEIRDVRPL 675
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V +E L L +K IE I L L + + NQ+ I L L NL+ L+L+ NR++++
Sbjct: 591 VNLENLTLEGVGLKNIEFISNLKQLNAMNVSHNQIEDITPLSLLKNLQWLNLADNRVKDV 650
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKI 159
L + +L L L N+I + + L + +++G KI
Sbjct: 651 SVLGSMLDLISLKLAGNEIRDVRPLIQLGQWFTIDVGRQKI 691
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 62/118 (52%)
Query: 75 ENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCS 134
E++ + TL+ L+ ++ + L++++NLE L L ++ I+ + +L L + +
Sbjct: 563 EDLLQIKTLEILKEKGKEIKDVTGLESMVNLENLTLEGVGLKNIEFISNLKQLNAMNVSH 622
Query: 135 NKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTK 192
N+I I + LK L+ L L DN+++ + L + +L L L N+I + L L +
Sbjct: 623 NQIEDITPLSLLKNLQWLNLADNRVKDVSVLGSMLDLISLKLAGNEIRDVRPLIQLGQ 680
>gi|404412361|ref|YP_006697948.1| internalin D [Listeria monocytogenes SLCC7179]
gi|404238060|emb|CBY59461.1| internalin D (LPXTG motif) [Listeria monocytogenes SLCC7179]
Length = 567
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 136/278 (48%), Gaps = 32/278 (11%)
Query: 32 QMSLDNPDEESEAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDN 91
+++L P+ S+ TE + E + E I +E + L L L L +N
Sbjct: 56 KITLSKPNTTSDVSQTELDSISEVTAESSN---------IASLEGVQYLNNLDTLVLNNN 106
Query: 92 QLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKV 151
++T + L L L IL+ S N++ +I L ++ NL +L L N+I ++ V +L L+
Sbjct: 107 KITTLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNLINLET 166
Query: 152 LELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEA 211
+EL +N+I I + GL NL L + NKIS + ++ L+KLN L+ N+ I +L
Sbjct: 167 IELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQ---ISDLRP 223
Query: 212 LTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L+NL +E + + N+IS + IA+L L ++ +NQ+SD
Sbjct: 224 LSNL-------------------AAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISD 264
Query: 272 WNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
+++ L N+ I LD + +P ++ +LV P
Sbjct: 265 ISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 301
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI ++LAN K+ L + + L + + + I +E + L NL+ L
Sbjct: 42 INEIFTDENLANAIKITLSKPNTTSDVSQTELDSISEVTAESSNIASLEGVQYLNNLDTL 101
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIENL 231
L NKI+ ++ LA LTKL+IL N+L I L +TNL QL L N L + NL
Sbjct: 102 VLNNNKITTLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNL 161
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 162 IN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 206
>gi|83629833|gb|ABC26578.1| internalin D [Listeria monocytogenes]
Length = 566
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 136/278 (48%), Gaps = 32/278 (11%)
Query: 32 QMSLDNPDEESEAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDN 91
+++L P+ S+ TE + E + E I +E + L L L L +N
Sbjct: 55 KITLSKPNTTSDVSQTELDSISEVTAESSN---------IASLEGVQYLNNLDTLVLNNN 105
Query: 92 QLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKV 151
++T + L L L IL+ S N++ +I L ++ NL +L L N+I ++ V +L L+
Sbjct: 106 KITTLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNLINLET 165
Query: 152 LELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEA 211
+EL +N+I I + GL NL L + NKIS + ++ L+KLN L+ N+ I +L
Sbjct: 166 IELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQ---ISDLRP 222
Query: 212 LTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L+NL +E + + N+IS + IA+L L ++ +NQ+SD
Sbjct: 223 LSNL-------------------AAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISD 263
Query: 272 WNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
+++ L N+ I LD + +P ++ +LV P
Sbjct: 264 ISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 300
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI ++LAN K+ L + + L + + + I +E + L NL+ L
Sbjct: 41 INEIFTDENLANAIKITLSKPNTTSDVSQTELDSISEVTAESSNIASLEGVQYLNNLDTL 100
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIENL 231
L NKI+ ++ LA LTKL+IL N+L I L +TNL QL L N L + NL
Sbjct: 101 VLNNNKITTLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNL 160
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 161 IN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 205
>gi|418678197|ref|ZP_13239471.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418686545|ref|ZP_13247711.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418740868|ref|ZP_13297244.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
gi|400321387|gb|EJO69247.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410738978|gb|EKQ83710.1| leucine rich repeat protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410751463|gb|EKR08440.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
str. 200702274]
Length = 400
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 142/242 (58%), Gaps = 13/242 (5%)
Query: 77 IHMLTTLKELELYDNQL-TVIENLDTLINLEILDLSFNRIREI-KGLDHLANLEKLYLCS 134
I L L+ L L++NQL T+ E + L NL++L+LS+N+I+ I K ++ L L+ L L +
Sbjct: 157 IGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGN 216
Query: 135 NKISKIEN-VDHLKKLKVLELGDNKIRIIENLDG-LTNLEELYLGKNKISRIDN-LASLT 191
N+++ + N + L+KL+ L L N++ + N G L NL++LYLG N+++ + N + L
Sbjct: 217 NQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLK 276
Query: 192 KLNILSLQCNRLRTI-ENLEALTNLTQLYLSENGLTTIENLLSNEK-LETLDVAYNKISI 249
L L L+ NRL T+ +++E L NL L L N LTT + K L+ LD+ N+++
Sbjct: 277 NLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTT 336
Query: 250 I-QNIAHLTELQEFWINDNQVSDW-NTVNVLENNKQLQTIYLDRNPVAQDPNYR-RKIKL 306
+ + I L LQ F +N+NQ++ N + L+N LQ +YL N ++ + R RK+
Sbjct: 337 LPKEIGQLKNLQVFELNNNQLTTLPNEIGQLQN---LQELYLIDNQLSSEEKERIRKLLP 393
Query: 307 VC 308
C
Sbjct: 394 KC 395
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 143/270 (52%), Gaps = 34/270 (12%)
Query: 61 IERLLLRWNLIKKI-ENIHMLTTLKELELYDNQL-TVIENLDTLINLEILDLSFNRIREI 118
++ L L +N +K + + I L L+ LEL NQL T+ E ++ L NL+ L LS+N+++ +
Sbjct: 71 LQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTL 130
Query: 119 -KGLDHLANLEKLYLCSNKISKI------------------------ENVDHLKKLKVLE 153
K + L NL++LYL N+++ + E + LK L+VLE
Sbjct: 131 PKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLE 190
Query: 154 LGDNKIRII-ENLDGLTNLEELYLGKNKISRIDN-LASLTKLNILSLQCNRLRTIEN-LE 210
L N+I+ I + ++ L L+ L LG N+++ + N + L KL LSL NRL T+ N +
Sbjct: 191 LSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIG 250
Query: 211 ALTNLTQLYLSENGLTTIENLLSNEK-LETLDVAYNKISII-QNIAHLTELQEFWINDNQ 268
L NL LYL N LT + N + K L+TL + N+++ + ++I L L+ + +NQ
Sbjct: 251 QLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQ 310
Query: 269 VSDWNTVNVLENNKQLQTIYLDRNPVAQDP 298
++ + +E K LQ + L N + P
Sbjct: 311 LTTF--PKEIEQLKNLQVLDLGSNQLTTLP 338
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 117/205 (57%), Gaps = 11/205 (5%)
Query: 103 INLEILDLSFNRIREI-KGLDHLANLEKLYLCSNKISKI-ENVDHLKKLKVLELGDNKIR 160
+++ +LDLS +++ + K + L NL++LYL N++ + + + L+ L+VLEL N+++
Sbjct: 46 LDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLK 105
Query: 161 II-ENLDGLTNLEELYLGKNKISRIDN-LASLTKLNILSLQCNRLRTIEN-LEALTNLTQ 217
+ E ++ L NL+ LYL N++ + + L L L L+ N+L T+ + L NL +
Sbjct: 106 TLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQR 165
Query: 218 LYLSENGLTTIENLLSNEK-LETLDVAYNKI-SIIQNIAHLTELQEFWINDNQVSDW-NT 274
L+L N L T+ + K L+ L+++YN+I +I + I L +LQ + +NQ++ N
Sbjct: 166 LHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNE 225
Query: 275 VNVLENNKQLQTIYLDRNPVAQDPN 299
+ L+ +LQ + L N + PN
Sbjct: 226 IGQLQ---KLQELSLSTNRLTTLPN 247
>gi|423543966|ref|ZP_17520324.1| hypothetical protein IGO_00401, partial [Bacillus cereus HuB5-5]
gi|401185670|gb|EJQ92762.1| hypothetical protein IGO_00401, partial [Bacillus cereus HuB5-5]
Length = 799
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 129/228 (56%), Gaps = 4/228 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ +DL+ N I+ I ++ L N+ L
Sbjct: 231 INEIAGLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLENINML 290
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKIS + + +KK+K L+L N I I+ L L+ +++LYL N+IS + + L
Sbjct: 291 FLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQL 350
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ + +L + N++ +E++ ++NL +L ++++ + I L KL+ L++ N IS I
Sbjct: 351 SNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDI 410
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPV 294
+++LT+L E + N+++D V L + Q Q I+L V
Sbjct: 411 SPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQKIFLGEASV 458
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 103/182 (56%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N IK I I L + L L DN+++ + L + ++ LDL N I +I+ L L+
Sbjct: 270 LTSNPIKNIHPIEQLENINMLFLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLS 329
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+++LYL +N+IS + ++ L +++L +G+NKI +E++ ++NL EL + ++I I
Sbjct: 330 TMKQLYLANNQISDLTGINQLSNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDIS 389
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L+ L KL +L+L+ N + I L LT+L ++ L N + + + K ++D+
Sbjct: 390 PLSKLGKLQVLNLEENYISDISPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQ 449
Query: 246 KI 247
KI
Sbjct: 450 KI 451
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 105/188 (55%), Gaps = 9/188 (4%)
Query: 111 SFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTN 170
S I EI GL+H+ NLEKL L + ++ I + L+ LK ++L N I+ I ++ L N
Sbjct: 227 SGEGINEIAGLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLEN 286
Query: 171 LEELYLGKNKISRIDNLASLTKL---NILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
+ L+L NKIS +L L+K+ L L N + I+ L L+ + QLYL+ N ++
Sbjct: 287 INMLFLRDNKIS---DLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISD 343
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ + +E L + NKIS +++I+ ++ L E I D+++ D + ++ L +LQ +
Sbjct: 344 LTGINQLSNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKL---GKLQVL 400
Query: 288 YLDRNPVA 295
L+ N ++
Sbjct: 401 NLEENYIS 408
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 107/198 (54%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E+L LR + + I I L LK ++L N + I ++ L N+ +L L N+I ++
Sbjct: 243 LEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLENINMLFLRDNKISDLTP 302
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L + ++ L L N I I+ + L +K L L +N+I + ++ L+N+E L++G NK
Sbjct: 303 LSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQLSNVELLWIGNNK 362
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
IS +++++ ++ L L + + ++ I L L L L L EN ++ I L + L +
Sbjct: 363 ISNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDISPLSNLTDLHEM 422
Query: 241 DVAYNKISIIQNIAHLTE 258
++ N+I+ ++ + L +
Sbjct: 423 NLGANEIADVRPVEELGK 440
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 86/148 (58%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK I+ L L N I+ I+ + L+T+K+L L +NQ++ + ++ L N+E+L + N+I
Sbjct: 304 SKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQLSNVELLWIGNNKI 363
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++ + ++NL +L + ++I I + L KL+VL L +N I I L LT+L E+
Sbjct: 364 SNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDISPLSNLTDLHEMN 423
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRL 203
LG N+I+ + + L K + +Q ++
Sbjct: 424 LGANEIADVRPVEELGKRISIDIQRQKI 451
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+L ++ +
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 620
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
N+I I L L NL+ L L N I + + S+ L L+L N I ++ L L
Sbjct: 621 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNE---ICDVRPLIQLG 677
Query: 217 QLYLSENGLTTI 228
Q + + G TI
Sbjct: 678 QWFSIDVGRQTI 689
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 69/118 (58%)
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E++ +K L++L+ +I+ + L+ +TNLE L L + I+ +++L +LNI+++
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 620
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ I L +L NL L L++N + + + S L +L++A N+I ++ + L +
Sbjct: 621 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNEICDVRPLIQLGQ 678
>gi|113475864|ref|YP_721925.1| hypothetical protein Tery_2223 [Trichodesmium erythraeum IMS101]
gi|110166912|gb|ABG51452.1| Leucine-rich repeat, typical subtype [Trichodesmium erythraeum
IMS101]
Length = 347
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 135/236 (57%), Gaps = 3/236 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I +L L N I ++ + L L L L +N++ I +L L NL L ++ N+I+ +
Sbjct: 102 ITQLSLNNNEISELFPLSKLQKLTHLYLDNNRIINIADLSQLTNLTHLSINDNKIKNLSS 161
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L +L L L L N+I I ++ +L +L L LG N I+ I+ L LTNL LYL N
Sbjct: 162 LSNLGKLTHLNLIFNQIEDISSLSNLTQLTRLNLGVNHIKNIKPLRNLTNLTHLYLNDNN 221
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I + L+SLT L L L N++ I +L LTNLT L LS+N + I NL + L++L
Sbjct: 222 IKELSPLSSLTNLTNLYLYRNQISHISSLSNLTNLTYLSLSDNYIKEISNLSNLNHLKSL 281
Query: 241 DVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQ 296
+ +N+I+ + +++ L +L ++ N+++D ++++ L +L++++L NP+ Q
Sbjct: 282 LLVFNQITKVDSLSTLNDLTLLDLSRNKITDISSLSTLA---KLKSLHLRNNPLTQ 334
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 116/209 (55%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L+ L L +NQ+ I + TL N+ L L+ N I E+ L L L LYL +N+I
Sbjct: 77 LSQLSYFSLNNNQIRNILPISTLKNITQLSLNNNEISELFPLSKLQKLTHLYLDNNRIIN 136
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
I ++ L L L + DNKI+ + +L L L L L N+I I +L++LT+L L+L
Sbjct: 137 IADLSQLTNLTHLSINDNKIKNLSSLSNLGKLTHLNLIFNQIEDISSLSNLTQLTRLNLG 196
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N ++ I+ L LTNLT LYL++N + + L S L L + N+IS I ++++LT L
Sbjct: 197 VNHIKNIKPLRNLTNLTHLYLNDNNIKELSPLSSLTNLTNLYLYRNQISHISSLSNLTNL 256
Query: 260 QEFWINDNQVSDWNTVNVLENNKQLQTIY 288
++DN + + + ++ L + K L ++
Sbjct: 257 TYLSLSDNYIKEISNLSNLNHLKSLLLVF 285
>gi|423467598|ref|ZP_17444366.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG6O-1]
gi|423536999|ref|ZP_17513417.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB2-9]
gi|402413536|gb|EJV45879.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG6O-1]
gi|402460581|gb|EJV92302.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus HuB2-9]
Length = 877
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 129/228 (56%), Gaps = 4/228 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ +DL+ N I+ I ++ L N+ L
Sbjct: 231 INEIAGLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLENINML 290
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKIS + + +KK+K L+L N I I+ L L+ +++LYL N+IS + + L
Sbjct: 291 FLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQL 350
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ + +L + N++ +E++ ++NL +L ++++ + I L KL+ L++ N IS I
Sbjct: 351 SNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDI 410
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPV 294
+++LT+L E + N+++D V L + Q Q I+L V
Sbjct: 411 SPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQKIFLGEASV 458
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 103/182 (56%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N IK I I L + L L DN+++ + L + ++ LDL N I +I+ L L+
Sbjct: 270 LTSNPIKNIHPIEQLENINMLFLRDNKISDLTPLSKMKKIKTLDLVGNNIEDIQPLFTLS 329
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+++LYL +N+IS + ++ L +++L +G+NKI +E++ ++NL EL + ++I I
Sbjct: 330 TMKQLYLANNQISDLTGINQLSNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDIS 389
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L+ L KL +L+L+ N + I L LT+L ++ L N + + + K ++D+
Sbjct: 390 PLSKLGKLQVLNLEENYISDISPLSNLTDLHEMNLGANEIADVRPVEELGKRISIDIQRQ 449
Query: 246 KI 247
KI
Sbjct: 450 KI 451
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 105/188 (55%), Gaps = 9/188 (4%)
Query: 111 SFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTN 170
S I EI GL+H+ NLEKL L + ++ I + L+ LK ++L N I+ I ++ L N
Sbjct: 227 SGEGINEIAGLEHMTNLEKLTLRESNVTDISAISKLRDLKYVDLTSNPIKNIHPIEQLEN 286
Query: 171 LEELYLGKNKISRIDNLASLTKL---NILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
+ L+L NKIS +L L+K+ L L N + I+ L L+ + QLYL+ N ++
Sbjct: 287 INMLFLRDNKIS---DLTPLSKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISD 343
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
+ + +E L + NKIS +++I+ ++ L E I D+++ D + ++ L +LQ +
Sbjct: 344 LTGINQLSNVELLWIGNNKISNVESISKMSNLIELEIADSEIKDISPLSKL---GKLQVL 400
Query: 288 YLDRNPVA 295
L+ N ++
Sbjct: 401 NLEENYIS 408
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 86/148 (58%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK I+ L L N I+ I+ + L+T+K+L L +NQ++ + ++ L N+E+L + N+I
Sbjct: 304 SKMKKIKTLDLVGNNIEDIQPLFTLSTMKQLYLANNQISDLTGINQLSNVELLWIGNNKI 363
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++ + ++NL +L + ++I I + L KL+VL L +N I I L LT+L E+
Sbjct: 364 SNVESISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDISPLSNLTDLHEMN 423
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRL 203
LG N+I+ + + L K + +Q ++
Sbjct: 424 LGANEIADVRPVEELGKRISIDIQRQKI 451
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+L ++ +
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 620
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
N+I I L L NL+ L L N I + + S+ L L+L N I ++ L L
Sbjct: 621 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNE---ICDVRPLIQLG 677
Query: 217 QLYLSENGLTTI 228
Q + + G TI
Sbjct: 678 QWFSIDVGRQTI 689
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 69/118 (58%)
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E++ +K L++L+ +I+ + L+ +TNLE L L + I+ +++L +LNI+++
Sbjct: 561 EDLLQIKTLEILKEKGKEIKDVTGLEYMTNLENLTLEGVGLKNIEFISNLKQLNIVNVSH 620
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTE 258
N++ I L +L NL L L++N + + + S L +L++A N+I ++ + L +
Sbjct: 621 NQIEDITPLSSLKNLQWLNLADNHIKDVTVIGSMLDLLSLNLAGNEICDVRPLIQLGQ 678
>gi|422420873|ref|ZP_16497826.1| leucine-rich repeat-containing protein [Listeria seeligeri FSL
S4-171]
gi|313639696|gb|EFS04472.1| leucine-rich repeat-containing protein [Listeria seeligeri FSL
S4-171]
Length = 364
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 111/209 (53%), Gaps = 5/209 (2%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L T+ EL D + + ++ L NL LDLS N I + L +L+NLE L L SNKI+
Sbjct: 81 LNTITELVYVDFGVEDLTGMEYLSNLNTLDLSQNNISNLDSLANLSNLESLSLNSNKITN 140
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
+ + +L KL LELG N++ + + + LTNLE L L N++ I L + L LS+
Sbjct: 141 LTALLNLPKLNDLELGVNQLSTLPSFENLTNLEILNLSSNQLDDISELKTAPGLTNLSIS 200
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N + I + L L Y N +T++E N L L ++NKI+ I ++ + L
Sbjct: 201 NNNITDISVVSDLNQLQVFYCDYNEITSLEGFRDNTTLTDLSASFNKITDITPLSSIPTL 260
Query: 260 QEFWINDNQVSDWNTVNVLENNKQLQTIY 288
+ I NQ+SD+++ LEN QL T +
Sbjct: 261 RSLTIEGNQISDFSS---LEN--QLLTTF 284
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 81/149 (54%)
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
+ L + +L + + +++L L L+L N I +++L L+NLE L L NKI
Sbjct: 79 EQLNTITELVYVDFGVEDLTGMEYLSNLNTLDLSQNNISNLDSLANLSNLESLSLNSNKI 138
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + L +L KLN L L N+L T+ + E LTNL L LS N L I L + L L
Sbjct: 139 TNLTALLNLPKLNDLELGVNQLSTLPSFENLTNLEILNLSSNQLDDISELKTAPGLTNLS 198
Query: 242 VAYNKISIIQNIAHLTELQEFWINDNQVS 270
++ N I+ I ++ L +LQ F+ + N+++
Sbjct: 199 ISNNNITDISVVSDLNQLQVFYCDYNEIT 227
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 12/182 (6%)
Query: 128 EKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG---LTNLEELYLGKNKISRI 184
+KL + + + E ++ + +L ++ G +E+L G L+NL L L +N IS +
Sbjct: 66 QKLGVSEDTVVTQEQLNTITELVYVDFG------VEDLTGMEYLSNLNTLDLSQNNISNL 119
Query: 185 DNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAY 244
D+LA+L+ L LSL N++ + L L L L L N L+T+ + + LE L+++
Sbjct: 120 DSLANLSNLESLSLNSNKITNLTALLNLPKLNDLELGVNQLSTLPSFENLTNLEILNLSS 179
Query: 245 NKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKI 304
N++ I + L I++N ++D ++V+ + QLQ Y D N + +R
Sbjct: 180 NQLDDISELKTAPGLTNLSISNNNITD---ISVVSDLNQLQVFYCDYNEITSLEGFRDNT 236
Query: 305 KL 306
L
Sbjct: 237 TL 238
>gi|422808467|ref|ZP_16856878.1| Internalin-like protein [Listeria monocytogenes FSL J1-208]
gi|378753501|gb|EHY64085.1| Internalin-like protein [Listeria monocytogenes FSL J1-208]
Length = 607
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 130/249 (52%), Gaps = 6/249 (2%)
Query: 38 PDEESEAETTESKAEDEESKEV------CIERLLLRWNLIKKIENIHMLTTLKELELYDN 91
PDE E S + S V I L + +E ++ L+ L +N
Sbjct: 44 PDEALAEEIQTSLGKASTSDTVTQTELNSITTLDASGKSVSSLEGMNYLSNLSYFSFSNN 103
Query: 92 QLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKV 151
Q++ + L L +L L L N++ I L +L+NL+ L L N IS ++ + +LK+L
Sbjct: 104 QVSDLSPLTNLTSLTTLALYDNQVSAIAPLANLSNLKLLQLSGNPISDLQPLANLKELTA 163
Query: 152 LELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEA 211
L++ D + I+ L GLT L L L N++S ++ L +L +L L++ N+L + L+
Sbjct: 164 LDVNDANVSNIQPLTGLTKLVALGLSNNQVSDLNALKALHQLISLNIGQNKLTNLNGLQD 223
Query: 212 LTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
LT LT L+ EN +T ++ L L TL+++ N+I+ IQ +A LT LQ ++ +NQ+SD
Sbjct: 224 LTRLTTLFAKENQITNVQPLSGLINLSTLELSTNQITDIQPLAGLTNLQTLYLLNNQISD 283
Query: 272 WNTVNVLEN 280
+ L N
Sbjct: 284 VTGLASLTN 292
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 107/191 (56%)
Query: 89 YDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKK 148
YDNQ++ I L L NL++L LS N I +++ L +L L L + +S I+ + L K
Sbjct: 123 YDNQVSAIAPLANLSNLKLLQLSGNPISDLQPLANLKELTALDVNDANVSNIQPLTGLTK 182
Query: 149 LKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIEN 208
L L L +N++ + L L L L +G+NK++ ++ L LT+L L + N++ ++
Sbjct: 183 LVALGLSNNQVSDLNALKALHQLISLNIGQNKLTNLNGLQDLTRLTTLFAKENQITNVQP 242
Query: 209 LEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQ 268
L L NL+ L LS N +T I+ L L+TL + N+IS + +A LT L IN N+
Sbjct: 243 LSGLINLSTLELSTNQITDIQPLAGLTNLQTLYLLNNQISDVTGLASLTNLDWLNINKNK 302
Query: 269 VSDWNTVNVLE 279
+S+ +N L+
Sbjct: 303 ISNIRPLNSLK 313
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L N I ++ + L L L++ D ++ I+ L L L L LS N++ ++ L
Sbjct: 142 LQLSGNPISDLQPLANLKELTALDVNDANVSNIQPLTGLTKLVALGLSNNQVSDLNALKA 201
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L L L + NK++ + + L +L L +N+I ++ L GL NL L L N+I+
Sbjct: 202 LHQLISLNIGQNKLTNLNGLQDLTRLTTLFAKENQITNVQPLSGLINLSTLELSTNQITD 261
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I LA LT L L L N++ + L +LTNL L +++N ++ I L S +KL + ++
Sbjct: 262 IQPLAGLTNLQTLYLLNNQISDVTGLASLTNLDWLNINKNKISNIRPLNSLKKLTIIQMS 321
>gi|47091400|ref|ZP_00229197.1| internalin E [Listeria monocytogenes str. 4b H7858]
gi|417314312|ref|ZP_12101013.1| internalin E [Listeria monocytogenes J1816]
gi|47020077|gb|EAL10813.1| internalin E [Listeria monocytogenes str. 4b H7858]
gi|328467873|gb|EGF38913.1| internalin E [Listeria monocytogenes J1816]
Length = 499
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 75 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVS 134
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L +L ++L I+ + ++ L L+ L L N+I I L LTNL+ L LG
Sbjct: 135 ALAGLKSLTTMHLIYTDITDVTPLEGLTNLQELNLDINQITDISPLAALTNLQTLSLGYT 194
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + +A+L+KL IL+ + +++ I L +L++LT++YL EN ++ + L
Sbjct: 195 QVSDLTPIANLSKLTILNAENSKVSDISPLASLSSLTEVYLRENQISDVSPL 246
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 10/202 (4%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + L GL +L +
Sbjct: 86 ITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLTTM 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL---YLSENGLTTIENL 231
+L I+ + L LT L L+L N++ I L ALTNL L Y + LT I NL
Sbjct: 146 HLIYTDITDVTPLEGLTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLTPIANL 205
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
KL L+ +K+S I +A L+ L E ++ +NQ+SD V+ L N L I L
Sbjct: 206 ---SKLTILNAENSKVSDISPLASLSSLTEVYLRENQISD---VSPLANIPNLSIIELTD 259
Query: 292 NPVAQDPNYRRKIKLVCPWIVQ 313
+ P Y + K++ P +++
Sbjct: 260 QIITNQPVYYQN-KIIVPNVIK 280
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 77/138 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + + L +L + L +T + L+ L NL+ L+L N+I +I
Sbjct: 120 ITELGLSGNPLKDVSALAGLKSLTTMHLIYTDITDVTPLEGLTNLQELNLDINQITDISP 179
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L ++S + + +L KL +L ++K+ I L L++L E+YL +N+
Sbjct: 180 LAALTNLQTLSLGYTQVSDLTPIANLSKLTILNAENSKVSDISPLASLSSLTEVYLRENQ 239
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 240 ISDVSPLANIPNLSIIEL 257
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N I I + LT L+ L L Q++ + + L L IL+ +++ +I
Sbjct: 164 LQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLTPIANLSKLTILNAENSKVSDISP 223
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKI 159
L L++L ++YL N+IS + + ++ L ++EL D I
Sbjct: 224 LASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQII 262
>gi|83629917|gb|ABC26620.1| internalin E [Listeria monocytogenes]
gi|83629931|gb|ABC26627.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 74 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVS 133
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L +L ++L I+ + ++ L L+ L L N+I I L LTNL+ L LG
Sbjct: 134 ALAGLKSLTTMHLIYTDITDVTPLEGLTNLQELNLDINQITDISPLAALTNLQTLSLGYT 193
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + +A+L+KL IL+ + +++ I L +L++LT++YL EN ++ + L
Sbjct: 194 QVSDLTPIANLSKLTILNAENSKVSDISPLASLSSLTEVYLRENQISDVSPL 245
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 105/202 (51%), Gaps = 10/202 (4%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + L GL +L +
Sbjct: 85 ITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLTTM 144
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL---YLSENGLTTIENL 231
+L I+ + L LT L L+L N++ I L ALTNL L Y + LT I NL
Sbjct: 145 HLIYTDITDVTPLEGLTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLTPIANL 204
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
KL L+ +K+S I +A L+ L E ++ +NQ+SD V+ L N L I L
Sbjct: 205 ---SKLTILNAENSKVSDISPLASLSSLTEVYLRENQISD---VSPLANIPNLSIIELTD 258
Query: 292 NPVAQDPNYRRKIKLVCPWIVQ 313
+ P Y + K++ P +++
Sbjct: 259 QIITNQPVYYQN-KIIVPNVIK 279
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 77/138 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + + L +L + L +T + L+ L NL+ L+L N+I +I
Sbjct: 119 ITELGLSGNPLKDVSALAGLKSLTTMHLIYTDITDVTPLEGLTNLQELNLDINQITDISP 178
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L ++S + + +L KL +L ++K+ I L L++L E+YL +N+
Sbjct: 179 LAALTNLQTLSLGYTQVSDLTPIANLSKLTILNAENSKVSDISPLASLSSLTEVYLRENQ 238
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 239 ISDVSPLANIPNLSIIEL 256
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L L N I I + LT L+ L L Q++ + + L L IL+ +++ +I
Sbjct: 163 LQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLTPIANLSKLTILNAENSKVSDISP 222
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKI 159
L L++L ++YL N+IS + + ++ L ++EL D I
Sbjct: 223 LASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQII 261
>gi|328871942|gb|EGG20312.1| hypothetical protein DFA_07435 [Dictyostelium fasciculatum]
Length = 717
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 129/248 (52%), Gaps = 26/248 (10%)
Query: 72 KKIENIHMLTT---LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLE 128
K+I++I++ LK++ + DN++T + + L +E+L+ + N I + + L L+
Sbjct: 26 KQIDSINLTVACPQLKKVSINDNKITSLGGISKLSTMEMLNAAHNSIDSMLDVKTLTKLK 85
Query: 129 KLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLA 188
L + NK+ KIE + + L L L DN+I +IENL+GLTNL L L NKI + +
Sbjct: 86 VLNISYNKLKKIEGLGKMDSLNALVLNDNEITVIENLEGLTNLNTLVLSNNKIDNVRGIE 145
Query: 189 SLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN-EKLETLDVAYNKI 247
L L LS+ N ++ I +L A L ++ ++ N LT+I+ + + LE LD ++N I
Sbjct: 146 PLKALTKLSISHNLIKQIPDLTAHPKLKEIRMAHNRLTSIDEKIKDLPNLEILDFSHNGI 205
Query: 248 SIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLV 307
I++I LT++ +L+++ L NPVA YR +K +
Sbjct: 206 KTIKDIQILTKVG----------------------KLRSLNLIGNPVAAIEGYRDFVKDL 243
Query: 308 CPWIVQID 315
P + +D
Sbjct: 244 FPGLDSLD 251
>gi|47213972|emb|CAG00663.1| unnamed protein product [Tetraodon nigroviridis]
Length = 260
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 119/227 (52%), Gaps = 12/227 (5%)
Query: 102 LINLEILDLSFNRIREIKGL---DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
L+ E++ S N ++ +GL ++L + L+L + I I ++ + L VL L DN+
Sbjct: 3 LLTTELISKSRNHVKRKRGLSLQEYLRTVTHLHLSNKNIEAIGDISACRNLAVLYLYDNQ 62
Query: 159 IRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
I I NLD ++L L+L N I+R++NL+SL KL+ L L NR+ +E LE LT L +L
Sbjct: 63 ITHIRNLDFASSLTHLFLQNNNITRMENLSSLQKLSKLYLGGNRIAVVEGLEKLTELREL 122
Query: 219 YLSENGLTTIENLLSNE--------KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVS 270
++ L E LL + L L++++N I I ++ L +L F DN++
Sbjct: 123 HVHNQRLAPGEKLLFDPGMLHSLAGSLCVLNISHNNIDDIGDLRALRKLHHFSAADNKLH 182
Query: 271 DWNTV-NVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
+ +V + +L + L NPV + YR + VC +V +D+
Sbjct: 183 HIQDLEDVFTHWPELLEMDLRGNPVCKTQKYRELLTTVCRSLVILDS 229
>gi|83629969|gb|ABC26646.1| internalin E [Listeria monocytogenes]
gi|85679293|gb|ABC72062.1| InlE [Listeria monocytogenes]
Length = 498
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 98/172 (56%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 74 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVS 133
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L +L+ L+L I+ + ++ L L+ L L N+I I L LTNL+ L LG
Sbjct: 134 ALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYT 193
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + LA+L+KL IL+ + ++ I L +L++LT++YL EN ++ + L
Sbjct: 194 QVSDLTPLANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPL 245
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 106/199 (53%), Gaps = 4/199 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + L GL +L+ L
Sbjct: 85 ITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLKML 144
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+L I+ + +LA LT L L+L N++ I L ALTNL L L ++ + L +
Sbjct: 145 HLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLTPLANL 204
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL L+ K+S I +A L+ L E ++ +NQ+SD V+ L N L I L +
Sbjct: 205 SKLTILNAENCKVSDISPLASLSSLTEVYLRENQISD---VSPLANIPNLSIIELTDQII 261
Query: 295 AQDPNYRRKIKLVCPWIVQ 313
P Y + K++ P +++
Sbjct: 262 TNQPVYYQN-KIIVPNVIK 279
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + + L +LK L L +T + +L L NL+ L+L N+I +I
Sbjct: 119 ITELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISP 178
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L ++S + + +L KL +L + K+ I L L++L E+YL +N+
Sbjct: 179 LAALTNLQTLSLGYTQVSDLTPLANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQ 238
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 239 ISDVSPLANIPNLSIIEL 256
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFN------ 113
++ L L + I + ++ LT L+EL L NQ+T I L L NL+ L L +
Sbjct: 140 SLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLT 199
Query: 114 ----------------RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
++ +I L L++L ++YL N+IS + + ++ L ++EL D
Sbjct: 200 PLANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQ 259
Query: 158 KI 159
I
Sbjct: 260 II 261
>gi|422414715|ref|ZP_16491672.1| internalin A, partial [Listeria innocua FSL J1-023]
gi|313625328|gb|EFR95135.1| internalin A [Listeria innocua FSL J1-023]
Length = 374
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 97/166 (58%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ +L + N I I + LT + +L+L+DNQ+T I + L NL L+L++N+I +I
Sbjct: 105 LTKLEMYQNNISDINVLENLTNITDLDLHDNQITDISPVRNLTNLVELNLAYNQISDIST 164
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ L+ L KL+ N++S I V L L L LG N+I I L LTNL+ L + N+
Sbjct: 165 VSTLSKLNKLWFTDNQVSDISAVAGLNNLSSLSLGYNQISDISILTNLTNLDGLGIEHNQ 224
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
IS + +A+LT L + L N++ + + LTNLT++YLS+ +T
Sbjct: 225 ISDLTPIANLTNLTYVGLHNNQISDLTPIANLTNLTRMYLSDQQIT 270
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 118/234 (50%), Gaps = 15/234 (6%)
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELG 155
IE + L NL L++S + +I L L L KL + N IS I +++L + L+L
Sbjct: 74 IEGIQYLTNLTELNISNAEVSDISALKDLTRLTKLEMYQNNISDINVLENLTNITDLDLH 133
Query: 156 DNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNL 215
DN+I I + LTNL EL L N+IS I +++L+KLN L N++ I + L NL
Sbjct: 134 DNQITDISPVRNLTNLVELNLAYNQISDISTVSTLSKLNKLWFTDNQVSDISAVAGLNNL 193
Query: 216 TQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV 275
+ L L N ++ I L + L+ L + +N+IS + IA+LT L +++NQ+SD +
Sbjct: 194 SSLSLGYNQISDISILTNLTNLDGLGIEHNQISDLTPIANLTNLTYVGLHNNQISDLTPI 253
Query: 276 NVLENNKQLQTIYLDRNPVAQDP-NYRRKIKL-----------VCPWIVQIDAT 317
L N L +YL + +P Y I + + P ++ D T
Sbjct: 254 ANLTN---LTRMYLSDQQITNNPIPYHSNIAISNNVKNNKNDVIAPLVISNDGT 304
>gi|153868931|ref|ZP_01998653.1| receptor protein kinase [Beggiatoa sp. PS]
gi|152074497|gb|EDN71345.1| receptor protein kinase [Beggiatoa sp. PS]
Length = 3115
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 120/211 (56%), Gaps = 10/211 (4%)
Query: 70 LIKKIENIHMLTTLKELELYDNQLT-VIENLDTLINLEILDLSFNRI-REIKGLDHLANL 127
+ N+ LT L+EL L+ NQLT I L L L+ L N++ I L L L
Sbjct: 531 FTGSVPNLSALTNLEELRLHTNQLTGSIPELSALTKLQFLSFGNNKLTGTIPELSALTKL 590
Query: 128 EKLYLCSNKIS-KIENVDHLKKLKVLELGDNKI-RIIENLDGLTNLEELYLGKNKI--SR 183
+ L L SN+++ I ++ L +L+ L LGDN++ + +L LTNL+EL L N++ S
Sbjct: 591 QDLRLYSNQLTGSIPDLSALTQLQFLSLGDNQLTGTMPDLSALTNLQELRLYDNQLTGSI 650
Query: 184 IDNLASLTKLNILSLQCNRL-RTIENLEALTNLTQLYLSENGLT-TIENLLSNEKLETLD 241
D L++LT+L IL L+ N+ TI +L ALT LT L LS+N LT +I ++ E L+
Sbjct: 651 PDELSNLTQLEILRLEDNQFTGTIPDLSALTLLTDLRLSKNQLTGSIPDVSGAENLQYFY 710
Query: 242 VAYNKIS--IIQNIAHLTELQEFWINDNQVS 270
+ YN +S + I LT+L+ ++NDN +
Sbjct: 711 LQYNDLSGEMPSWINTLTDLERLYLNDNDFT 741
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 119/233 (51%), Gaps = 21/233 (9%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYD-----------NQLTV-IENLDTLINLE 106
V E LL NLI + ++ LT L+ L LY NQLT I +L L NL+
Sbjct: 1644 VVTEIKLLDNNLIGTLPDLSALTGLEHLALYSAVDEEKKSLTPNQLTGNIPDLSALTNLK 1703
Query: 107 ILDLSFNRI-REIKGLDHLANLEKLYLCSNKISK--IENVDHLKKLKVLELGDNKI-RII 162
+L L N++ I + L L+ L L NK+S E V L L +L L N++ I
Sbjct: 1704 VLHLVGNQLDGPIPDMSALTQLQFLALGFNKLSGQIPEFVSTLTNLTMLHLPTNQLTGTI 1763
Query: 163 ENLDGLTNLEELYLGKNKISR-IDNLASLTKLNILSLQCNRLRTI--ENLEALTNLTQLY 219
+L LT L+ + L +N+++ I L T+L IL+L N+ E++ LTNLT LY
Sbjct: 1764 PDLSALTKLQAISLHRNQLTGPIPELKEQTQLRILTLSANKFSGTIPESISTLTNLTGLY 1823
Query: 220 LSENGLT-TIENLLSNEKLETLDVAYNKISI-IQNIAHLTELQEFWINDNQVS 270
L+ N LT TI +L + KLE + + N+ + +++ LQ+ + DN +S
Sbjct: 1824 LAANQLTGTIPDLSALTKLEYIHLHLNQFTGQFPDVSGAGNLQDISVADNSLS 1876
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 89/185 (48%), Gaps = 31/185 (16%)
Query: 70 LIKKIENIHMLTTLKELELYDNQLT-VIENLDTLINLEILDLSFNRIREI--KGLDHLAN 126
L I ++ LT L+ + L+ NQLT I L L IL LS N+ + + L N
Sbjct: 1759 LTGTIPDLSALTKLQAISLHRNQLTGPIPELKEQTQLRILTLSANKFSGTIPESISTLTN 1818
Query: 127 LEKLYLCSNKISK-IENVDHLKKLKVLELGDNK----------------IRIIEN----- 164
L LYL +N+++ I ++ L KL+ + L N+ I + +N
Sbjct: 1819 LTGLYLAANQLTGTIPDLSALTKLEYIHLHLNQFTGQFPDVSGAGNLQDISVADNSLSGE 1878
Query: 165 ----LDGLTNLEELYLGKNKISR-IDNLASLTKLNILSLQCNRL-RTIENLEALTNLTQL 218
L+ LTNLE L+L N + I L+ L++L ILSLQ N+L I +L ++L L
Sbjct: 1879 LPSWLNTLTNLEWLHLHDNSFTGEIPELSQLSQLQILSLQDNQLTGPIPDLAQFSDLETL 1938
Query: 219 YLSEN 223
L+ N
Sbjct: 1939 TLTNN 1943
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 24/225 (10%)
Query: 70 LIKKIENIHMLTTLKELELYDNQLTV-IENLDTLINLEILDLSFNRI-REIKGLDHLANL 127
L +I N++ L+ L L L DNQLT + +L L ++++L L N++ I L L NL
Sbjct: 308 LTGEIPNVNTLSNLGHLALNDNQLTGNVPDLSGLTSIQLLWLHNNQLEGPIPALTALTNL 367
Query: 128 EKLYLCSNKISKIENVDHLKKLKV-----LELGDNKIRIIEN-LDGLTNLEELYLGKNKI 181
++L L N + + N D+ + +V + D +++ +N + L L + G N
Sbjct: 368 DELNLSDNSLCQDSNTDYAGRSEVDAFPTCSICDTAVQMQKNQCETLFALYDNTNGDNWS 427
Query: 182 SRIDNLASLTKLNILSLQCNR--------------LRTIENLEALTNLTQLYLSENGLT- 226
+ + T + CN + T+ +L LT L + LS N LT
Sbjct: 428 RKTGWKQTNTPCGWEGIICNSDGYVTNISLYNNQLVGTLPDLSVLTELLYVSLSGNQLTG 487
Query: 227 TIENLLSNEKLETLDVAYNKIS-IIQNIAHLTELQEFWINDNQVS 270
++ +L ++ KL TL N++S + +++ LT+L+ + +DNQ +
Sbjct: 488 SLPDLSASTKLHTLAADNNQLSGTLPDLSALTQLKTLYFHDNQFT 532
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
Query: 70 LIKKIENIHMLTTLKELELYDNQLT--VIENLDTLINLEILDLSFNRI-REIKGLDHLAN 126
L + ++ LT L+EL LYDNQLT + + L L LEIL L N+ I L L
Sbjct: 623 LTGTMPDLSALTNLQELRLYDNQLTGSIPDELSNLTQLEILRLEDNQFTGTIPDLSALTL 682
Query: 127 LEKLYLCSNKIS-KIENVDHLKKLKVLELGDNKIR--IIENLDGLTNLEELYLGKNKISR 183
L L L N+++ I +V + L+ L N + + ++ LT+LE LYL N +
Sbjct: 683 LTDLRLSKNQLTGSIPDVSGAENLQYFYLQYNDLSGEMPSWINTLTDLERLYLNDNDFTG 742
Query: 184 -IDNLASLTKLNILSLQCNRL 203
I +L++LT + L++ N L
Sbjct: 743 PIPDLSALTNVQYLTVSVNPL 763
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 25/153 (16%)
Query: 77 IHMLTTLKELELYDNQLT-VIENLDTLINLEILDLSFNRIR-EIKGLDHLANLEKLYLCS 134
I LT L+ ++ NQLT I NL L L++L+L+ N++ I L L L +
Sbjct: 246 ISTLTQLENIQFNKNQLTGSIPNLSALTQLQVLNLNKNQLSGSIPELSALTQLSHFSANT 305
Query: 135 NKIS-KIENVDHLKKLKVLELGDNKIRI-IENLDGLTNLEELYLGKNKISRIDNLASLTK 192
N+++ +I NV+ L L L L DN++ + +L GLT+++ L+L N++
Sbjct: 306 NQLTGEIPNVNTLSNLGHLALNDNQLTGNVPDLSGLTSIQLLWLHNNQLEG--------- 356
Query: 193 LNILSLQCNRLRTIENLEALTNLTQLYLSENGL 225
I L ALTNL +L LS+N L
Sbjct: 357 ------------PIPALTALTNLDELNLSDNSL 377
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 107/212 (50%), Gaps = 28/212 (13%)
Query: 65 LLRWNLIKKIENIHMLTTLKELELYDNQLT-VIENLDTLINLEILDLSFNRI-REIKGLD 122
LL NLI + ++ LT L+ L L NQL+ I +L L L+ L L N+ I L
Sbjct: 164 LLDNNLIGTLPDLSNLTNLQYLWLQTNQLSGTIPDLSQLTQLQSLILHSNQFTGTIPDLS 223
Query: 123 HLANLEKLYLCSNKISKI--ENVDHLKKLKVLELGDNKI-RIIENLDGLTNLEELYLGKN 179
+NL++L L N++S + L +L+ ++ N++ I NL LT L+ L L KN
Sbjct: 224 ASSNLQQLELQLNQLSGTIPTWISTLTQLENIQFNKNQLTGSIPNLSALTQLQVLNLNKN 283
Query: 180 KIS-RIDNLASLTKLNILSLQCNRLRT-IENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
++S I L++LT+L+ S N+L I N+ L+NL L L++N LT
Sbjct: 284 QLSGSIPELSALTQLSHFSANTNQLTGEIPNVNTLSNLGHLALNDNQLT----------- 332
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQV 269
+ +++ LT +Q W+++NQ+
Sbjct: 333 ----------GNVPDLSGLTSIQLLWLHNNQL 354
>gi|145547368|ref|XP_001459366.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427190|emb|CAK91969.1| unnamed protein product [Paramecium tetraurelia]
Length = 668
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 104/169 (61%)
Query: 57 KEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIR 116
++ E+L L W + + + LK L N++ VI+NL +L NL LDL N+I+
Sbjct: 117 RQANAEKLSLDWLDLSHMPLLEGEEKLKILTFQHNRIGVIQNLVSLPNLLYLDLYDNQIK 176
Query: 117 EIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYL 176
EI+ L + L+ L + N+I KI+N+D+L KL+VL+L NKI +E L+ L +L+ L L
Sbjct: 177 EIEELKQVQKLKVLLMPKNQIRKIQNLDYLLKLEVLDLHSNKITNLEGLNKLKSLKVLNL 236
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGL 225
G N I +++ L LT LN L+L+ N++ I+++ L L +L+LS+N +
Sbjct: 237 GNNLIQKLEGLEELTSLNELNLKINQIEFIDHISVLPQLQKLFLSQNKI 285
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 100/163 (61%), Gaps = 3/163 (1%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L + N I I+N+ L L L+LYDNQ+ IE L + L++L + N+IR+I+ LD+
Sbjct: 146 LTFQHNRIGVIQNLVSLPNLLYLDLYDNQIKEIEELKQVQKLKVLLMPKNQIRKIQNLDY 205
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR 183
L LE L L SNKI+ +E ++ LK LKVL LG+N I+ +E L+ LT+L EL L N+I
Sbjct: 206 LLKLEVLDLHSNKITNLEGLNKLKSLKVLNLGNNLIQKLEGLEELTSLNELNLKINQIEF 265
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLT 226
ID+++ L +L L L N+ I + +L +LYL N ++
Sbjct: 266 IDHISVLPQLQKLFLSQNK---INQYPFIFDLLELYLENNPIS 305
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 110/205 (53%), Gaps = 32/205 (15%)
Query: 105 LEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIEN 164
L+IL NRI I+ L L NL L L N+I +IE + ++KLKVL + N+IR I+N
Sbjct: 143 LKILTFQHNRIGVIQNLVSLPNLLYLDLYDNQIKEIEELKQVQKLKVLLMPKNQIRKIQN 202
Query: 165 LDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENG 224
LD L LE L L NKI+ ++ L L L +L+L N ++ +E LE LT+L +
Sbjct: 203 LDYLLKLEVLDLHSNKITNLEGLNKLKSLKVLNLGNNLIQKLEGLEELTSLNE------- 255
Query: 225 LTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV-NVLENNKQ 283
L++ N+I I +I+ L +LQ+ +++ N+++ + + ++LE
Sbjct: 256 ---------------LNLKINQIEFIDHISVLPQLQKLFLSQNKINQYPFIFDLLE---- 296
Query: 284 LQTIYLDRNPVAQDPNYRRKIKLVC 308
+YL+ NP++Q N K +C
Sbjct: 297 ---LYLENNPISQ--NKSEYHKYIC 316
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
Query: 112 FNRIREIKG--------LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE 163
F+ +++I G L+ AN EKL L +S + ++ +KLK+L N+I +I+
Sbjct: 98 FSELQQIPGIWVCYRRPLERQANAEKLSLDWLDLSHMPLLEGEEKLKILTFQHNRIGVIQ 157
Query: 164 NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
NL L NL L L N+I I+ L + KL +L + N++R I+NL+ L L L L N
Sbjct: 158 NLVSLPNLLYLDLYDNQIKEIEELKQVQKLKVLLMPKNQIRKIQNLDYLLKLEVLDLHSN 217
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
+T +E L + L+ L++ N I ++ + LT L E + NQ+ + ++VL Q
Sbjct: 218 KITNLEGLNKLKSLKVLNLGNNLIQKLEGLEELTSLNELNLKINQIEFIDHISVLP---Q 274
Query: 284 LQTIYLDRNPVAQDP 298
LQ ++L +N + Q P
Sbjct: 275 LQKLFLSQNKINQYP 289
>gi|323347700|gb|EGA81964.1| Sds22p [Saccharomyces cerevisiae Lalvin QA23]
Length = 189
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 82/122 (67%), Gaps = 5/122 (4%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLK--ELELYDNQLTVIE-NLDTLINLEILDLSFNRIRE 117
+++L LR NLI+ I + +L K +L+ YDN++ I N++ L L LDLSFN+I+
Sbjct: 68 LKQLCLRQNLIESISEVEVLPHDKIVDLDFYDNKIKHISSNVNKLTKLTSLDLSFNKIKH 127
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE--NLDGLTNLEELY 175
IK L++L +LE LY N ISKIEN+ LK LK LELG NK+ IE + +GL+NLEE+
Sbjct: 128 IKNLENLTDLENLYFVQNSISKIENLSTLKSLKNLELGGNKVHSIEPDSFEGLSNLEEIL 187
Query: 176 LG 177
+G
Sbjct: 188 VG 189
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 27/168 (16%)
Query: 104 NLEILDLSFNRIREIKGLD--HLANLEKLYLCSNKISKIENVDHLKKLKVLELG--DNKI 159
++E++DL +I+ ++ L+ NL++L L N I I V+ L K+++L DNKI
Sbjct: 43 DVEVIDLVHLKIKSLEDLNLYRFKNLKQLCLRQNLIESISEVEVLPHDKIVDLDFYDNKI 102
Query: 160 RIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLY 219
+ I + N+ LTKL L L N+++ I+NLE LT+L LY
Sbjct: 103 KHISS---------------------NVNKLTKLTSLDLSFNKIKHIKNLENLTDLENLY 141
Query: 220 LSENGLTTIENLLSNEKLETLDVAYNKISIIQ--NIAHLTELQEFWIN 265
+N ++ IENL + + L+ L++ NK+ I+ + L+ L+E +
Sbjct: 142 FVQNSISKIENLSTLKSLKNLELGGNKVHSIEPDSFEGLSNLEEILVG 189
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 149 LKVLELGDNKIRIIE--NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC--NRLR 204
++V++L KI+ +E NL NL++L L +N I I + L I+ L N+++
Sbjct: 44 VEVIDLVHLKIKSLEDLNLYRFKNLKQLCLRQNLIESISEVEVLPHDKIVDLDFYDNKIK 103
Query: 205 TIE-NLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFW 263
I N+ LT LT L LS N + I+NL + LE L N IS I+N++ L L+
Sbjct: 104 HISSNVNKLTKLTSLDLSFNKIKHIKNLENLTDLENLYFVQNSISKIENLSTLKSLKNLE 163
Query: 264 INDNQV 269
+ N+V
Sbjct: 164 LGGNKV 169
>gi|300868028|ref|ZP_07112666.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
gi|300333948|emb|CBN57844.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
Length = 376
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 61 IERLLLRWNLIKKI-ENIHMLTTLKELELYDNQLT-VIENLDTLINLEILDLSFNRIREI 118
++RL L N + K+ E I L+ L+ L L +N+LT V E + +L L+ L+L +N++ E+
Sbjct: 45 LQRLDLDCNQLTKVPEAIASLSQLQILNLSNNKLTEVPEAIASLSQLQTLNLIYNKLTEV 104
Query: 119 -KGLDHLANLEKLYLCSNKISKI-ENVDHLKKLKVLELGDNKI-RIIENLDGLTNLEELY 175
+ + L L+KLYL +N+++++ E + L +L+ L L N++ + E + L+ L L
Sbjct: 105 PEAIATLTQLQKLYLSNNQLTQVPEAIASLSQLQTLNLNFNQLTEVPEAIASLSQLRRLN 164
Query: 176 LGKNKISRI-DNLASLTKLNILSLQCNRLRTI-ENLEALTNLTQLYLSENGLTTI-ENLL 232
L N+++ + + +ASLT+L L L N+LR + E + +LT L +L LS+N LT + E +
Sbjct: 165 LSYNQLTEVPETIASLTQLEWLYLNNNQLRKVPEAIASLTQLQRLSLSDNELTAVPEAIA 224
Query: 233 SNEKLETLDVAYNKIS-IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
S +L +L+++ N+++ + + IA LT+LQE ++ NQ+++ + + QLQ +YL
Sbjct: 225 SLSQLRSLNLSNNQLTELPEAIASLTQLQELYLVGNQLTELP--EAIASLTQLQELYLVG 282
Query: 292 NPVAQDP 298
N + P
Sbjct: 283 NELTAVP 289
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 153/265 (57%), Gaps = 13/265 (4%)
Query: 61 IERLLLRWNLIKKI-ENIHMLTTLKELELYDNQLT-VIENLDTLINLEILDLSFNRIREI 118
+++L L N + ++ E I L+ L+ L L NQLT V E + +L L L+LS+N++ E+
Sbjct: 114 LQKLYLSNNQLTQVPEAIASLSQLQTLNLNFNQLTEVPEAIASLSQLRRLNLSYNQLTEV 173
Query: 119 -KGLDHLANLEKLYLCSNKISKI-ENVDHLKKLKVLELGDNKIRII-ENLDGLTNLEELY 175
+ + L LE LYL +N++ K+ E + L +L+ L L DN++ + E + L+ L L
Sbjct: 174 PETIASLTQLEWLYLNNNQLRKVPEAIASLTQLQRLSLSDNELTAVPEAIASLSQLRSLN 233
Query: 176 LGKNKISRI-DNLASLTKLNILSLQCNRLRTI-ENLEALTNLTQLYLSENGLTTI-ENLL 232
L N+++ + + +ASLT+L L L N+L + E + +LT L +LYL N LT + E +
Sbjct: 234 LSNNQLTELPEAIASLTQLQELYLVGNQLTELPEAIASLTQLQELYLVGNELTAVPEAIA 293
Query: 233 SNEKLETLDVAYNKISII-QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
S +L+ L ++ N+++ + + IA LT LQ ++ NQ++ + + QLQ +YLD
Sbjct: 294 SLTQLQRLSLSDNELTAVPEAIASLTHLQGLDLSYNQLTQ--VPEAIASLSQLQELYLDD 351
Query: 292 NPVAQD--PNYRRKIKLVCPWIVQI 314
NP+ D Y + I+ V +++ I
Sbjct: 352 NPLNPDLAAAYEQGIEAVKEYLLDI 376
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 86/139 (61%), Gaps = 13/139 (9%)
Query: 166 DGLTNLEELYLGKNKISRI-DNLASLTKLNILSLQCNRLRTIENLEALTNLTQLY---LS 221
+G T L+ LG +++ + + +A+LT+L L L CN+L + EA+ +L+QL LS
Sbjct: 20 EGATKLD---LGYMELTEVPEAIATLTQLQRLDLDCNQLTKVP--EAIASLSQLQILNLS 74
Query: 222 ENGLTTI-ENLLSNEKLETLDVAYNKIS-IIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
N LT + E + S +L+TL++ YNK++ + + IA LT+LQ+ ++++NQ++ +
Sbjct: 75 NNKLTEVPEAIASLSQLQTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQLTQ--VPEAIA 132
Query: 280 NNKQLQTIYLDRNPVAQDP 298
+ QLQT+ L+ N + + P
Sbjct: 133 SLSQLQTLNLNFNQLTEVP 151
>gi|85679297|gb|ABC72064.1| InlE [Listeria monocytogenes]
Length = 488
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 74 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVS 133
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L +L ++L I+ + ++ L L+ L L N+I I L LTNL+ L LG
Sbjct: 134 ALAGLKSLTTMHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYT 193
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + +A+L+KL IL+ + +++ I L +L++LT++YL EN ++ + L
Sbjct: 194 QVSDLTPIANLSKLTILNAENSKVSDISPLASLSSLTEVYLRENQISDVSPL 245
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 10/202 (4%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + L GL +L +
Sbjct: 85 ITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLTTM 144
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL---YLSENGLTTIENL 231
+L I+ + +LA LT L L+L N++ I L ALTNL L Y + LT I NL
Sbjct: 145 HLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLTPIANL 204
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
KL L+ +K+S I +A L+ L E ++ +NQ+SD V+ L N L I L
Sbjct: 205 ---SKLTILNAENSKVSDISPLASLSSLTEVYLRENQISD---VSPLANIPNLSIIELTD 258
Query: 292 NPVAQDPNYRRKIKLVCPWIVQ 313
+ P Y + K++ P +++
Sbjct: 259 QIITNQPVYYQN-KIIVPNVIK 279
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 77/138 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + + L +L + L +T + +L L NL+ L+L N+I +I
Sbjct: 119 ITELGLSGNPLKDVSALAGLKSLTTMHLIYTDITDVTSLAGLTNLQELNLDINQITDISP 178
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L ++S + + +L KL +L ++K+ I L L++L E+YL +N+
Sbjct: 179 LAALTNLQTLSLGYTQVSDLTPIANLSKLTILNAENSKVSDISPLASLSSLTEVYLRENQ 238
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 239 ISDVSPLANIPNLSIIEL 256
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 22/111 (19%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSF------------------ 112
I + ++ LT L+EL L NQ+T I L L NL+ L L +
Sbjct: 151 ITDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLTPIANLSKLTIL 210
Query: 113 ----NRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKI 159
+++ +I L L++L ++YL N+IS + + ++ L ++EL D I
Sbjct: 211 NAENSKVSDISPLASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQII 261
>gi|47096524|ref|ZP_00234115.1| internalin D [Listeria monocytogenes str. 1/2a F6854]
gi|254913500|ref|ZP_05263512.1| internalin D [Listeria monocytogenes J2818]
gi|254937919|ref|ZP_05269616.1| internalin D [Listeria monocytogenes F6900]
gi|386045907|ref|YP_005964239.1| internalin D [Listeria monocytogenes J0161]
gi|47015115|gb|EAL06057.1| internalin D [Listeria monocytogenes str. 1/2a F6854]
gi|258610528|gb|EEW23136.1| internalin D [Listeria monocytogenes F6900]
gi|293591508|gb|EFF99842.1| internalin D [Listeria monocytogenes J2818]
gi|345532898|gb|AEO02339.1| internalin D [Listeria monocytogenes J0161]
Length = 567
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 135/278 (48%), Gaps = 32/278 (11%)
Query: 32 QMSLDNPDEESEAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDN 91
+++L P+ S+ TE + E + E I +E L L L L +N
Sbjct: 56 KITLSKPNTTSDVSQTELDSISEVTAESSN---------IASLEGTQYLNNLDTLVLNNN 106
Query: 92 QLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKV 151
++T + L L L IL+ S N++ +I L ++ NL +L L N+I ++ V +L L+
Sbjct: 107 KITTLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNLINLET 166
Query: 152 LELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEA 211
+EL +N+I I + GL NL L + NKIS + ++ L+KLN L+ N+ I +L
Sbjct: 167 IELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQ---ISDLRP 223
Query: 212 LTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L+NL +E + + N+IS + IA+L L ++ +NQ+SD
Sbjct: 224 LSNL-------------------AAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISD 264
Query: 272 WNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
+++ L N+ I LD + +P ++ +LV P
Sbjct: 265 ISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 301
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 88/168 (52%), Gaps = 6/168 (3%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI ++LAN K+ L + + L + + + I +E L NL+ L
Sbjct: 42 INEIFTDENLANAIKITLSKPNTTSDVSQTELDSISEVTAESSNIASLEGTQYLNNLDTL 101
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIENL 231
L NKI+ ++ LA LTKL+IL N+L I L +TNL QL L N L + NL
Sbjct: 102 VLNNNKITTLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNL 161
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 162 IN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 206
>gi|386042597|ref|YP_005961402.1| internalin D [Listeria monocytogenes 10403S]
gi|404409494|ref|YP_006695082.1| internalin D [Listeria monocytogenes SLCC5850]
gi|2347105|gb|AAB67970.1| inlD [Listeria monocytogenes]
gi|345535831|gb|AEO05271.1| internalin D [Listeria monocytogenes 10403S]
gi|404229320|emb|CBY50724.1| internalin D (LPXTG motif) [Listeria monocytogenes SLCC5850]
Length = 567
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 23/239 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +E + L L L L +N++T + L L L IL+ S N++ +I L ++ NL +L
Sbjct: 86 IASLEGVQYLNNLDTLVLNNNKITDLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQL 145
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+I ++ V +L L+ +EL +N+I I + GL NL L + NKIS + ++ L
Sbjct: 146 RLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGL 205
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+KLN L+ N+ I +L L+NL +E + + N+IS +
Sbjct: 206 SKLNHLTADSNQ---ISDLRPLSNL-------------------AAMEVMRLDGNQISDV 243
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
IA+L L ++ +NQ+SD +++ L N+ I LD + +P ++ +LV P
Sbjct: 244 TPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 301
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 96/171 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L+L N I + + LT L LE +NQL+ I L + NL L L N+I+++ G
Sbjct: 98 LDTLVLNNNKITDLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNG 157
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ +L NLE + L +N+I+ I V LK L L + +NKI + + GL+ L L N+
Sbjct: 158 VSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQ 217
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
IS + L++L + ++ L N++ + + L NL ++L+EN ++ I +L
Sbjct: 218 ISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSL 268
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI ++LAN K L + + L ++ + + I +E + L NL+ L
Sbjct: 42 INEIFTDENLANAIKTTLSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYLNNLDTL 101
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIENL 231
L NKI+ ++ LA LTKL+IL N+L I L +TNL QL L N L + NL
Sbjct: 102 VLNNNKITDLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNL 161
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 162 IN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 206
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINL--------EILDLS- 111
+ +L L N IK++ + L L+ +EL +NQ+T I + L NL +I DLS
Sbjct: 142 LHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSP 201
Query: 112 -------------FNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
N+I +++ L +LA +E + L N+IS + + +L L + L +N+
Sbjct: 202 ISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQ 261
Query: 159 IRIIENLDGLTNLEELY 175
I I +L L N +
Sbjct: 262 ISDISSLQPLFNSPNFF 278
>gi|28210241|ref|NP_781185.1| internalin A-like protein/ S-layer protein [Clostridium tetani E88]
gi|28202677|gb|AAO35122.1| internalin A-like protein/putative S-layer protein [Clostridium
tetani E88]
Length = 695
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 126/250 (50%), Gaps = 25/250 (10%)
Query: 77 IHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNK 136
I L L+ L L DN+L + ++ L+NLE LD++ N + + + L NL+ L + N
Sbjct: 421 IKNLINLERLTLGDNKLVSLAGIENLVNLESLDINKNNVSNLASIRDLTNLKSLNINENN 480
Query: 137 ISKIENVDHLKKLKVLELGDNKIRIIENL-------------DGLTN---------LEEL 174
++ + V +LK L+ + L N + + L +GLT+ L+EL
Sbjct: 481 VTDLSVVTNLKNLERISLNKNGVTSLGALAALPELEWVTAKENGLTSTVGLQNALKLKEL 540
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+L N+IS + +LA+LT L LSL+ N + + +L LT + LYL +N + +I L S
Sbjct: 541 FLDSNQISDLSSLANLTSLETLSLRTNNISDVSSLSDLTRMKNLYLHKNNIGSIAPLASM 600
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQT---IYLDR 291
E L L V N IS I +A++ L+ I +N VS+ V+ L++ + L D
Sbjct: 601 ENLTRLYVGKNNISDISAVANMKNLKTLSIGENMVSNIGPVSGLQSLETLDVADNFITDA 660
Query: 292 NPVAQDPNYR 301
+P PN +
Sbjct: 661 SPAIGLPNLK 670
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 103/187 (55%)
Query: 85 ELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVD 144
+L L + I L+ NL+ LDLS N I+++ L L L++L L NKI+ ++ +D
Sbjct: 85 KLNLKSKNIKDISGLEFFENLQSLDLSNNEIKDLGSLSGLKYLKELTLYKNKITDVKALD 144
Query: 145 HLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR 204
LK L+ L L DNK++ IE L GL L EL LGKN + + L L L IL+L+ N +
Sbjct: 145 GLKNLEKLNLRDNKVKNIEGLKGLEKLRELDLGKNSVFQPKPLKDLKNLRILNLESNGIG 204
Query: 205 TIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWI 264
E+LE L + L LS N + +E LL+ + L + N ++ I + +T L+ I
Sbjct: 205 NAEDLEELKQVEHLILSNNTVDDVEPLLTLTNVNKLYLDDNPVTHIGKLKDMTNLKRLNI 264
Query: 265 NDNQVSD 271
N++ + D
Sbjct: 265 NNDSIED 271
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 118/222 (53%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V +E L + N + + +I LT LK L + +N +T + + L NLE + L+ N + +
Sbjct: 447 VNLESLDINKNNVSNLASIRDLTNLKSLNINENNVTDLSVVTNLKNLERISLNKNGVTSL 506
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGK 178
L L LE + N ++ + + KLK L L N+I + +L LT+LE L L
Sbjct: 507 GALAALPELEWVTAKENGLTSTVGLQNALKLKELFLDSNQISDLSSLANLTSLETLSLRT 566
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
N IS + +L+ LT++ L L N + +I L ++ NLT+LY+ +N ++ I + + + L+
Sbjct: 567 NNISDVSSLSDLTRMKNLYLHKNNIGSIAPLASMENLTRLYVGKNNISDISAVANMKNLK 626
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLEN 280
TL + N +S I ++ L L+ + DN ++D + L N
Sbjct: 627 TLSIGENMVSNIGPVSGLQSLETLDVADNFITDASPAIGLPN 668
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 2/222 (0%)
Query: 43 EAETTESKAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTL 102
EA E A ++ + +L L+ IK I + L+ L+L +N++ + +L L
Sbjct: 65 EATNKEPDATLTKNDFKMVTKLNLKSKNIKDISGLEFFENLQSLDLSNNEIKDLGSLSGL 124
Query: 103 INLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRII 162
L+ L L N+I ++K LD L NLEKL L NK+ IE + L+KL+ L+LG N +
Sbjct: 125 KYLKELTLYKNKITDVKALDGLKNLEKLNLRDNKVKNIEGLKGLEKLRELDLGKNSVFQP 184
Query: 163 ENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSE 222
+ L L NL L L N I ++L L ++ L L N + +E L LTN+ +LYL +
Sbjct: 185 KPLKDLKNLRILNLESNGIGNAEDLEELKQVEHLILSNNTVDDVEPLLTLTNVNKLYLDD 244
Query: 223 NGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWI 264
N +T I L L+ L++ + I + + LQ W+
Sbjct: 245 NPVTHIGKLKDMTNLKRLNINNDSIEDLAELKKFKNLQ--WL 284
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 122/238 (51%), Gaps = 25/238 (10%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L + +L+L+D +T + ++ LI+L +L+ N I ++ L + NLE LYL K+
Sbjct: 336 LQRVTQLDLWDKNVTNLAGIENLIDLRVLNAGKNNISNLEPLKSMDNLENLYLTKTKVVS 395
Query: 140 IENVDHLKKLKVL----------------------ELGDNKIRIIENLDGLTNLEELYLG 177
+E + L LK L LGDNK+ + ++ L NLE L +
Sbjct: 396 LEPLRGLTNLKALVINETNVSDLTPIKNLINLERLTLGDNKLVSLAGIENLVNLESLDIN 455
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN +S + ++ LT L L++ N + + + L NL ++ L++NG+T++ L + +L
Sbjct: 456 KNNVSNLASIRDLTNLKSLNINENNVTDLSVVTNLKNLERISLNKNGVTSLGALAALPEL 515
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
E + N ++ + + +L+E +++ NQ+SD ++ L N L+T+ L N ++
Sbjct: 516 EWVTAKENGLTSTVGLQNALKLKELFLDSNQISDLSS---LANLTSLETLSLRTNNIS 570
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 112/277 (40%), Gaps = 66/277 (23%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI----- 115
+E+L LR N +K IE + L L+EL+L N + + L L NL IL+L N I
Sbjct: 149 LEKLNLRDNKVKNIEGLKGLEKLRELDLGKNSVFQPKPLKDLKNLRILNLESNGIGNAED 208
Query: 116 -REIKGLDHL----------------ANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
E+K ++HL N+ KLYL N ++ I + + LK L + ++
Sbjct: 209 LEELKQVEHLILSNNTVDDVEPLLTLTNVNKLYLDDNPVTHIGKLKDMTNLKRLNINNDS 268
Query: 159 IRIIENLDGLTNLEELYL----------------------------------------GK 178
I + L NL+ L K
Sbjct: 269 IEDLAELKKFKNLQWLKFKNQEMVLDNKKLNDLLVDPNKEVKFADKNLEFAIRDKIEKPK 328
Query: 179 NKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
I + D L +T+L++ L IENL +L L +N ++ +E L S + LE
Sbjct: 329 GAIKKAD-LQRVTQLDLWDKNVTNLAGIENL---IDLRVLNAGKNNISNLEPLKSMDNLE 384
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV 275
L + K+ ++ + LT L+ IN+ VSD +
Sbjct: 385 NLYLTKTKVVSLEPLRGLTNLKALVINETNVSDLTPI 421
>gi|83629883|gb|ABC26603.1| internalin D [Listeria monocytogenes]
gi|83629889|gb|ABC26606.1| internalin D [Listeria monocytogenes]
Length = 566
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 23/239 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +E + L L L L +N++T + L L L IL+ S N++ +I L ++ NL +L
Sbjct: 85 IASLEGVQYLNNLDTLVLNNNKITDLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQL 144
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+I ++ V +L L+ +EL +N+I I + GL NL L + NKIS + ++ L
Sbjct: 145 RLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGL 204
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+KLN L+ N+ I +L L+NL +E + + N+IS +
Sbjct: 205 SKLNHLTADSNQ---ISDLRPLSNL-------------------AAMEVMRLDGNQISDV 242
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
IA+L L ++ +NQ+SD +++ L N+ I LD + +P ++ +LV P
Sbjct: 243 TPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 300
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 96/171 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L+L N I + + LT L LE +NQL+ I L + NL L L N+I+++ G
Sbjct: 97 LDTLVLNNNKITDLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNG 156
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ +L NLE + L +N+I+ I V LK L L + +NKI + + GL+ L L N+
Sbjct: 157 VSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQ 216
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
IS + L++L + ++ L N++ + + L NL ++L+EN ++ I +L
Sbjct: 217 ISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSL 267
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI ++LAN K L + + L ++ + + I +E + L NL+ L
Sbjct: 41 INEIFTDENLANAIKTTLSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYLNNLDTL 100
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIENL 231
L NKI+ ++ LA LTKL+IL N+L I L +TNL QL L N L + NL
Sbjct: 101 VLNNNKITDLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNL 160
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 161 IN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 205
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINL--------EILDLS- 111
+ +L L N IK++ + L L+ +EL +NQ+T I + L NL +I DLS
Sbjct: 141 LHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSP 200
Query: 112 -------------FNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
N+I +++ L +LA +E + L N+IS + + +L L + L +N+
Sbjct: 201 ISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQ 260
Query: 159 IRIIENLDGLTNLEELY 175
I I +L L N +
Sbjct: 261 ISDISSLQPLFNSPNFF 277
>gi|85679291|gb|ABC72061.1| InlE [Listeria monocytogenes]
Length = 498
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 99/172 (57%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 74 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSLLANLTKITELGLSGNPLKDVS 133
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L +L+ L+L I+ + ++ L L+ L L N+I I L LTNL+ L LG
Sbjct: 134 ALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYT 193
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + +A+L+KL IL+ + +++ I L +L++LT++YL EN ++ + L
Sbjct: 194 QVSDLTPIANLSKLTILNAENSKVSDISPLASLSSLTEVYLRENQISDVSPL 245
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 108/202 (53%), Gaps = 10/202 (4%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + L GL +L+ L
Sbjct: 85 ITTIEGMQYLTNLSELELTDNQITDVSLLANLTKITELGLSGNPLKDVSALAGLKSLKML 144
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL---YLSENGLTTIENL 231
+L I+ + +LA LT L L+L N++ I L ALTNL L Y + LT I NL
Sbjct: 145 HLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLTPIANL 204
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
KL L+ +K+S I +A L+ L E ++ +NQ+SD V+ L N L I L
Sbjct: 205 ---SKLTILNAENSKVSDISPLASLSSLTEVYLRENQISD---VSPLANIPNLSIIELTD 258
Query: 292 NPVAQDPNYRRKIKLVCPWIVQ 313
+ P Y + K++ P +++
Sbjct: 259 QIITNQPVYYQN-KIIVPNVIK 279
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + + L +LK L L +T + +L L NL+ L+L N+I +I
Sbjct: 119 ITELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISP 178
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L ++S + + +L KL +L ++K+ I L L++L E+YL +N+
Sbjct: 179 LAALTNLQTLSLGYTQVSDLTPIANLSKLTILNAENSKVSDISPLASLSSLTEVYLRENQ 238
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 239 ISDVSPLANIPNLSIIEL 256
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 22/122 (18%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSF------- 112
++ L L + I + ++ LT L+EL L NQ+T I L L NL+ L L +
Sbjct: 140 SLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLT 199
Query: 113 ---------------NRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
+++ +I L L++L ++YL N+IS + + ++ L ++EL D
Sbjct: 200 PIANLSKLTILNAENSKVSDISPLASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQ 259
Query: 158 KI 159
I
Sbjct: 260 II 261
>gi|451820472|ref|YP_007456673.1| hypothetical protein Cspa_c36590 [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451786451|gb|AGF57419.1| hypothetical protein Cspa_c36590 [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 356
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 123/232 (53%), Gaps = 23/232 (9%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTV--IENLDTLINLEIL----DLSF-- 112
IE L L +N I+ ++ I L LK L L++ Q V I N ++++ IL DL F
Sbjct: 109 IEYLNLSYNPIENVDVIEKLPNLKHLNLFETQAKVPKIMNPTEILSIGILNNCMDLEFLT 168
Query: 113 --NRIREI-------------KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
+ ++EI K + ++ +EKLYL ++KI + +++ LK L+L N
Sbjct: 169 KYDNVKEIFAPKWIDDFNTIKKYIKYVDAIEKLYLYNSKIRTLNSLEGFINLKTLDLSAN 228
Query: 158 KIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQ 217
I I L LTNL EL L NKIS I ++ L KL LSL N + I LE L NL +
Sbjct: 229 SIADITGLKYLTNLVELDLSINKISDISFISHLEKLEKLSLDSNLIHDISALENLKNLKE 288
Query: 218 LYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQV 269
L L E G+ I L LE L + YNKI+ I +I +L++LQ WI+ N++
Sbjct: 289 LRLMECGIKDISALKYLVNLEKLYLDYNKITDISSIENLSKLQVLWIDGNKI 340
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
IE+L L + I+ + ++ LK L+L N + I L L NL LDLS N+I +I
Sbjct: 197 AIEKLYLYNSKIRTLNSLEGFINLKTLDLSANSIADITGLKYLTNLVELDLSINKISDIS 256
Query: 120 GLDHLANLEKLYLCSN---KISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYL 176
+ HL LEKL L SN IS +EN+ +LK+L+++E G I+ I L L NLE+LYL
Sbjct: 257 FISHLEKLEKLSLDSNLIHDISALENLKNLKELRLMECG---IKDISALKYLVNLEKLYL 313
Query: 177 GKNKISRIDNLASLTKLNILSLQCNRLRTIENLEAL 212
NKI+ I ++ +L+KL +L + N++ E L+ L
Sbjct: 314 DYNKITDISSIENLSKLQVLWIDGNKINNQEILKKL 349
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 127/287 (44%), Gaps = 50/287 (17%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I IE I LK+LEL + + I L L LE LDLS N I++I + L +E L
Sbjct: 53 ITSIEGIQYCENLKKLELIEIGIRDISLLKNLKKLEYLDLSNNYIKDINEIRDLNLIEYL 112
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRI--------------------IENLDGLTN 170
L N I ++ ++ L LK L L + + ++ +E L N
Sbjct: 113 NLSYNPIENVDVIEKLPNLKHLNLFETQAKVPKIMNPTEILSIGILNNCMDLEFLTKYDN 172
Query: 171 LEELYLGKNKISRIDNLASLTK-------LNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
++E++ K ID+ ++ K + L L +++RT+ +LE NL L LS N
Sbjct: 173 VKEIFAPK----WIDDFNTIKKYIKYVDAIEKLYLYNSKIRTLNSLEGFINLKTLDLSAN 228
Query: 224 GLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQ 283
+ I L L LD++ NKIS I I+HL +L++ ++ N + D + + L+N K+
Sbjct: 229 SIADITGLKYLTNLVELDLSINKISDISFISHLEKLEKLSLDSNLIHDISALENLKNLKE 288
Query: 284 -------------------LQTIYLDRNPVAQDPNYRRKIKLVCPWI 311
L+ +YLD N + + KL WI
Sbjct: 289 LRLMECGIKDISALKYLVNLEKLYLDYNKITDISSIENLSKLQVLWI 335
>gi|83629825|gb|ABC26574.1| internalin D [Listeria monocytogenes]
Length = 566
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 23/239 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +E + L L L L +N++T + L L L IL+ S N++ +I L ++ NL +L
Sbjct: 85 IASLEGVQYLNNLDTLVLNNNKITDLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQL 144
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+I ++ V +L L+ +EL +N+I I + GL NL L + NKIS + ++ L
Sbjct: 145 RLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGL 204
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+KLN L+ N+ I +L L+NL +E + + N+IS +
Sbjct: 205 SKLNHLTADSNQ---ISDLRPLSNL-------------------AAMEVMRLDGNQISDV 242
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
IA+L L ++ +NQ+SD +++ L N+ I LD + +P ++ +LV P
Sbjct: 243 TPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 300
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 96/171 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L+L N I + + LT L LE +NQL+ I L + NL L L N+I+++ G
Sbjct: 97 LDTLVLNNNKITDLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNG 156
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ +L NLE + L +N+I+ I V LK L L + +NKI + + GL+ L L N+
Sbjct: 157 VSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQ 216
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
IS + L++L + ++ L N++ + + L NL ++L+EN ++ I +L
Sbjct: 217 ISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSL 267
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI ++LAN K L + + L ++ + + I +E + L NL+ L
Sbjct: 41 INEIFTDENLANAIKTTLSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYLNNLDTL 100
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIENL 231
L NKI+ ++ LA LTKL+IL N+L I L +TNL QL L N L + NL
Sbjct: 101 VLNNNKITDLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNL 160
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 161 IN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 205
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINL--------EILDLS- 111
+ +L L N IK++ + L L+ +EL +NQ+T I + L NL +I DLS
Sbjct: 141 LHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSP 200
Query: 112 -------------FNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
N+I +++ L +LA +E + L N+IS + + +L L + L +N+
Sbjct: 201 ISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQ 260
Query: 159 IRIIENLDGLTNLEELY 175
I I +L L N +
Sbjct: 261 ISDISSLQPLFNSPNFF 277
>gi|83629887|gb|ABC26605.1| internalin D [Listeria monocytogenes]
Length = 566
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 23/239 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +E + L L L L +N++T + L L L IL+ S N++ +I L ++ NL +L
Sbjct: 85 IASLEGVQYLNNLDTLVLNNNKITDLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQL 144
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+I ++ V +L L+ +EL +N+I I + GL NL L + NKIS + ++ L
Sbjct: 145 RLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGL 204
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+KLN L+ N+ I +L L+NL +E + + N+IS +
Sbjct: 205 SKLNHLTADSNQ---ISDLRPLSNL-------------------AAMEVMRLDGNQISDV 242
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
IA+L L ++ +NQ+SD +++ L N+ I LD + +P ++ +LV P
Sbjct: 243 TPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 300
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 96/171 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L+L N I + + LT L LE +NQL+ I L + NL L L N+I+++ G
Sbjct: 97 LDTLVLNNNKITDLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNG 156
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ +L NLE + L +N+I+ I V LK L L + +NKI + + GL+ L L N+
Sbjct: 157 VSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQ 216
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
IS + L++L + ++ L N++ + + L NL ++L+EN ++ I +L
Sbjct: 217 ISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSL 267
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI ++LAN K L + + L ++ + + I +E + L NL+ L
Sbjct: 41 INEIFTDENLANAIKTTLSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYLNNLDTL 100
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIENL 231
L NKI+ ++ LA LTKL+IL N+L I L +TNL QL L N L + NL
Sbjct: 101 VLNNNKITDLNPLAGLTKLSILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNL 160
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 161 IN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 205
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINL--------EILDLS- 111
+ +L L N IK++ + L L+ +EL +NQ+T I + L NL +I DLS
Sbjct: 141 LHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSP 200
Query: 112 -------------FNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
N+I +++ L +LA +E + L N+IS + + +L L + L +N+
Sbjct: 201 ISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQ 260
Query: 159 IRIIENLDGLTNLEELY 175
I I +L L N +
Sbjct: 261 ISDISSLQPLFNSPNFF 277
>gi|443652792|ref|ZP_21130908.1| small GTP-binding domain protein [Microcystis aeruginosa
DIANCHI905]
gi|443334234|gb|ELS48757.1| small GTP-binding domain protein [Microcystis aeruginosa
DIANCHI905]
Length = 875
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 144/254 (56%), Gaps = 14/254 (5%)
Query: 50 KAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLT-VIENLDTLINLEIL 108
+A+DE ++++ + NL + I LT+L+EL L +NQ++ + E L L +L+ L
Sbjct: 12 RAKDERAEKLDLSGR----NLTEIPPEIPHLTSLQELNLSNNQISEIPEALAQLTSLQRL 67
Query: 109 DLSFNRIREIK-GLDHLANLEKLYLCSNKISKI-ENVDHLKKLKVLELGDNKIR-IIENL 165
L N+IREI L HL +L+ LYL +N+IS+I E + L L+ L+L DN+IR I + L
Sbjct: 68 YLKNNQIREIPEALTHLTSLQVLYLNNNQISEIPEALAQLTSLQRLDLSDNQIREIPKAL 127
Query: 166 DGLTNLEELYLGKNKISRI-DNLASLTKLNILSLQCNRLRTI-ENLEALTNLTQLYLSEN 223
LT+L+EL L N+I I + LA LT L +L L N+++ I E L LT+L LYLS N
Sbjct: 128 AHLTSLQELDLSDNQIREIPEALAHLTSLELLFLNNNQIKEIPEALAHLTSLQVLYLSNN 187
Query: 224 GLTTIENLLSN-EKLETLDVAYNKIS-IIQNIAHLTELQEFWINDNQVSDWNTVNVLENN 281
+ I L+ L+ L + N+I I + +AHL L+ + +N ++ N +
Sbjct: 188 QIREIPEALAQLTSLQNLHLKNNQIREIPEALAHLVNLKRLVLQNNPIT--NVPPEIIRQ 245
Query: 282 KQLQTIYLDRNPVA 295
+TI D NP A
Sbjct: 246 GWGKTILDDGNPQA 259
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 85/148 (57%), Gaps = 6/148 (4%)
Query: 155 GDNKIRIIENLDGLTNLEELYLGKNKISRI-DNLASLTKLNILSLQCNRLRTI-ENLEAL 212
G N I + LT+L+EL L N+IS I + LA LT L L L+ N++R I E L L
Sbjct: 25 GRNLTEIPPEIPHLTSLQELNLSNNQISEIPEALAQLTSLQRLYLKNNQIREIPEALTHL 84
Query: 213 TNLTQLYLSENGLTTIENLLSN-EKLETLDVAYNKIS-IIQNIAHLTELQEFWINDNQVS 270
T+L LYL+ N ++ I L+ L+ LD++ N+I I + +AHLT LQE ++DNQ+
Sbjct: 85 TSLQVLYLNNNQISEIPEALAQLTSLQRLDLSDNQIREIPKALAHLTSLQELDLSDNQIR 144
Query: 271 DWNTVNVLENNKQLQTIYLDRNPVAQDP 298
+ L + L+ ++L+ N + + P
Sbjct: 145 E--IPEALAHLTSLELLFLNNNQIKEIP 170
>gi|289433621|ref|YP_003463493.1| hypothetical protein lse_0252 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289169865|emb|CBH26403.1| leucine rich repeat domain protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 364
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 111/209 (53%), Gaps = 5/209 (2%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L T+ EL D + + ++ L NL L+LS N I + L +L+NLE L L SNKI+
Sbjct: 81 LNTITELVYVDFGVEDLTGMEYLSNLNTLNLSQNNISNLDSLANLSNLEVLSLNSNKITN 140
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQ 199
+ + +L KL LELG N+I + + + LTNLE L L N++ I L + L LS+
Sbjct: 141 LTALMNLPKLNDLELGINQISTLPSFENLTNLEILNLSSNQLDDISELKTAPGLTNLSVS 200
Query: 200 CNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
N + I + L L Y N +T++E N L L ++NKI+ I ++ + L
Sbjct: 201 SNNITDISVVSELDQLQVFYCDYNEITSLEGFRDNTTLTDLSASFNKITDITPLSSIPTL 260
Query: 260 QEFWINDNQVSDWNTVNVLENNKQLQTIY 288
+ I NQ+SD+++ LEN QL T +
Sbjct: 261 RSLTIEVNQISDFSS---LEN--QLLTTF 284
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%)
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
D L + +L + + +++L L L L N I +++L L+NLE L L NKI
Sbjct: 79 DQLNTITELVYVDFGVEDLTGMEYLSNLNTLNLSQNNISNLDSLANLSNLEVLSLNSNKI 138
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLD 241
+ + L +L KLN L L N++ T+ + E LTNL L LS N L I L + L L
Sbjct: 139 TNLTALMNLPKLNDLELGINQISTLPSFENLTNLEILNLSSNQLDDISELKTAPGLTNLS 198
Query: 242 VAYNKISIIQNIAHLTELQEFWINDNQVS 270
V+ N I+ I ++ L +LQ F+ + N+++
Sbjct: 199 VSSNNITDISVVSELDQLQVFYCDYNEIT 227
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L L N I + + L L +LEL NQ++ + + + L NLEIL+LS N++ +I
Sbjct: 128 LEVLSLNSNKITNLTALMNLPKLNDLELGINQISTLPSFENLTNLEILNLSSNQLDDISE 187
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L L + SN I+ I V L +L+V N+I +E T L +L NK
Sbjct: 188 LKTAPGLTNLSVSSNNITDISVVSELDQLQVFYCDYNEITSLEGFRDNTTLTDLSASFNK 247
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLE 210
I+ I L+S+ L L+++ N++ +LE
Sbjct: 248 ITDITPLSSIPTLRSLTIEVNQISDFSSLE 277
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 144 DHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRL 203
D L + L D + + ++ L+NL L L +N IS +D+LA+L+ L +LSL N+
Sbjct: 79 DQLNTITELVYVDFGVEDLTGMEYLSNLNTLNLSQNNISNLDSLANLSNLEVLSLNSNK- 137
Query: 204 RTIENLEALTNLTQLYLSENGLTTIENLLSNE---KLETLDVAYNKISIIQNIAHLTELQ 260
I NL AL NL +L E G+ I L S E LE L+++ N++ I + L
Sbjct: 138 --ITNLTALMNLPKLNDLELGINQISTLPSFENLTNLEILNLSSNQLDDISELKTAPGLT 195
Query: 261 EFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKL 306
++ N ++D + V+ L+ QLQ Y D N + +R L
Sbjct: 196 NLSVSSNNITDISVVSELD---QLQVFYCDYNEITSLEGFRDNTTL 238
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 8/221 (3%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I ++++ L+ L+ L L N++T + L L L L+L N+I + ++L
Sbjct: 111 LSQNNISNLDSLANLSNLEVLSLNSNKITNLTALMNLPKLNDLELGINQISTLPSFENLT 170
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
NLE L L SN++ I + L L + N I I + L L+ Y N+I+ ++
Sbjct: 171 NLEILNLSSNQLDDISELKTAPGLTNLSVSSNNITDISVVSELDQLQVFYCDYNEITSLE 230
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
T L LS N++ I L ++ L L + N ++ + L N+ L T D
Sbjct: 231 GFRDNTTLTDLSASFNKITDITPLSSIPTLRSLTIEVNQISDFSS-LENQLLTTFDATGQ 289
Query: 246 KISIIQNIAHLTELQEFWINDNQVSD-----WNTVNVLENN 281
++ + L E + I DN+ + W T ENN
Sbjct: 290 EVYLPS--VALGESTDIVIKDNKGATLTDWVWYTPGTYENN 328
>gi|290892592|ref|ZP_06555585.1| InlE protein [Listeria monocytogenes FSL J2-071]
gi|404406718|ref|YP_006689433.1| internalin E [Listeria monocytogenes SLCC2376]
gi|290557901|gb|EFD91422.1| InlE protein [Listeria monocytogenes FSL J2-071]
gi|404240867|emb|CBY62267.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC2376]
Length = 499
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 75 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVS 134
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ L +L+ L+L I+ + ++ L L+ L L N+I I L LTNL+ L LG
Sbjct: 135 AIAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYT 194
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + LA+L+KL IL+ + +++ I L +L++L ++YL EN ++ + L
Sbjct: 195 QVSDLTPLANLSKLTILNAENSKVSDISPLASLSSLAEVYLRENQISDVSPL 246
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 107/199 (53%), Gaps = 4/199 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + + GL +L+ L
Sbjct: 86 ITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSAIAGLKSLKML 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+L I+ + +LA LT L L+L N++ I L ALTNL L L ++ + L +
Sbjct: 146 HLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLTPLANL 205
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL L+ +K+S I +A L+ L E ++ +NQ+SD V+ L N L I L +
Sbjct: 206 SKLTILNAENSKVSDISPLASLSSLAEVYLRENQISD---VSPLANIPNLSIIELTDQII 262
Query: 295 AQDPNYRRKIKLVCPWIVQ 313
P Y + K++ P +++
Sbjct: 263 TNQPVYYQN-KIIVPNVIK 280
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 78/138 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + I L +LK L L +T + +L L NL+ L+L N+I +I
Sbjct: 120 ITELGLSGNPLKDVSAIAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISP 179
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L ++S + + +L KL +L ++K+ I L L++L E+YL +N+
Sbjct: 180 LAALTNLQTLSLGYTQVSDLTPLANLSKLTILNAENSKVSDISPLASLSSLAEVYLRENQ 239
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 240 ISDVSPLANIPNLSIIEL 257
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 22/122 (18%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSF------- 112
++ L L + I + ++ LT L+EL L NQ+T I L L NL+ L L +
Sbjct: 141 SLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLT 200
Query: 113 ---------------NRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
+++ +I L L++L ++YL N+IS + + ++ L ++EL D
Sbjct: 201 PLANLSKLTILNAENSKVSDISPLASLSSLAEVYLRENQISDVSPLANIPNLSIIELTDQ 260
Query: 158 KI 159
I
Sbjct: 261 II 262
>gi|85679295|gb|ABC72063.1| InlE [Listeria monocytogenes]
Length = 498
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 74 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVS 133
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
+ L +L+ L+L I+ + ++ L L+ L L N+I I L LTNL+ L LG
Sbjct: 134 AIAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYT 193
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + LA+L+KL IL+ + +++ I L +L++L ++YL EN ++ + L
Sbjct: 194 QVSDLTPLANLSKLTILNAENSKVSDISPLASLSSLAEVYLRENQISDVSPL 245
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 107/199 (53%), Gaps = 4/199 (2%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + + GL +L+ L
Sbjct: 85 ITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSAIAGLKSLKML 144
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
+L I+ + +LA LT L L+L N++ I L ALTNL L L ++ + L +
Sbjct: 145 HLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLTPLANL 204
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
KL L+ +K+S I +A L+ L E ++ +NQ+SD V+ L N L I L +
Sbjct: 205 SKLTILNAENSKVSDISPLASLSSLAEVYLRENQISD---VSPLANIPNLSIIELTDQII 261
Query: 295 AQDPNYRRKIKLVCPWIVQ 313
P Y + K++ P +++
Sbjct: 262 TNQPVYYQN-KIIVPNVIK 279
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 78/138 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + I L +LK L L +T + +L L NL+ L+L N+I +I
Sbjct: 119 ITELGLSGNPLKDVSAIAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISP 178
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL+ L L ++S + + +L KL +L ++K+ I L L++L E+YL +N+
Sbjct: 179 LAALTNLQTLSLGYTQVSDLTPLANLSKLTILNAENSKVSDISPLASLSSLAEVYLRENQ 238
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 239 ISDVSPLANIPNLSIIEL 256
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 22/122 (18%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSF------- 112
++ L L + I + ++ LT L+EL L NQ+T I L L NL+ L L +
Sbjct: 140 SLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLT 199
Query: 113 ---------------NRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
+++ +I L L++L ++YL N+IS + + ++ L ++EL D
Sbjct: 200 PLANLSKLTILNAENSKVSDISPLASLSSLAEVYLRENQISDVSPLANIPNLSIIELTDQ 259
Query: 158 KI 159
I
Sbjct: 260 II 261
>gi|449443646|ref|XP_004139588.1| PREDICTED: leucine-rich repeat-containing protein 9-like [Cucumis
sativus]
Length = 478
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 131/238 (55%), Gaps = 5/238 (2%)
Query: 82 TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIE 141
T+ L+L L+ I L NLE LDL+FN + ++GL+ NL+ L + NK+ ++
Sbjct: 20 TITTLKLNQKALSDITGLSLFKNLEKLDLTFNNLTSLQGLESCTNLKWLSVVQNKLDNLK 79
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
+ L KL VL G NK+R ++ + L L L L N+I+ I L + LN L L N
Sbjct: 80 GI--LSKLTVLNAGKNKLRSMDEIRPLVGLCALILNDNEIASICKLDQMKNLNTLVLSRN 137
Query: 202 RLRTI-ENLEALTNLTQLYLSENGLTTIENLL-SNEKLETLDVAYNKISIIQN-IAHLTE 258
+R+I ++L + ++ +L S L +I++ L S +L+ L +A+N+I ++ N +AH +
Sbjct: 138 PIRSIGDSLLKVKSMKKLSFSNCKLQSIDSSLKSCVQLKELRLAHNEIRMLPNDLAHNKK 197
Query: 259 LQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCPWIVQIDA 316
L + +N + W+ + VL + L+ + L NP+A+ +KI+ + P + ++A
Sbjct: 198 LLNLDLGNNVIVRWSDLKVLSSLGYLRNLNLQGNPIAESAKLDKKIRRLVPGLRVLNA 255
>gi|83629881|gb|ABC26602.1| internalin D [Listeria monocytogenes]
Length = 566
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 23/239 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +E + L L L L +N++T + L L L IL+ S N++ +I L ++ NL +L
Sbjct: 85 IASLEGVQYLNNLDTLVLNNNKITDLNPLAGLTKLNILEASNNQLSDISALSNVTNLHQL 144
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+I ++ V +L L+ +EL +N+I I + GL NL L + NKIS + ++ L
Sbjct: 145 RLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGL 204
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+KLN L+ N+ I +L L+NL +E + + N+IS +
Sbjct: 205 SKLNHLTADSNQ---ISDLRPLSNL-------------------AAMEVMRLDGNQISDV 242
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
IA+L L ++ +NQ+SD +++ L N+ I LD + +P ++ +LV P
Sbjct: 243 TPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 300
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 96/171 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L+L N I + + LT L LE +NQL+ I L + NL L L N+I+++ G
Sbjct: 97 LDTLVLNNNKITDLNPLAGLTKLNILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNG 156
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ +L NLE + L +N+I+ I V LK L L + +NKI + + GL+ L L N+
Sbjct: 157 VSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQ 216
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
IS + L++L + ++ L N++ + + L NL ++L+EN ++ I +L
Sbjct: 217 ISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSL 267
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI ++LAN K L + + L ++ + + I +E + L NL+ L
Sbjct: 41 INEIFTDENLANAIKTTLSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYLNNLDTL 100
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIENL 231
L NKI+ ++ LA LTKLNIL N+L I L +TNL QL L N L + NL
Sbjct: 101 VLNNNKITDLNPLAGLTKLNILEASNNQLSDISALSNVTNLHQLRLDGNQIKQLNGVSNL 160
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 161 IN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 205
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINL--------EILDLS- 111
+ +L L N IK++ + L L+ +EL +NQ+T I + L NL +I DLS
Sbjct: 141 LHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSP 200
Query: 112 -------------FNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
N+I +++ L +LA +E + L N+IS + + +L L + L +N+
Sbjct: 201 ISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQ 260
Query: 159 IRIIENLDGLTNLEELY 175
I I +L L N +
Sbjct: 261 ISDISSLQPLFNSPNFF 277
>gi|119487242|ref|ZP_01620993.1| Rab family protein [Lyngbya sp. PCC 8106]
gi|119455797|gb|EAW36932.1| Rab family protein [Lyngbya sp. PCC 8106]
Length = 282
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 108/202 (53%), Gaps = 12/202 (5%)
Query: 108 LDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG 167
L+L+ I +++ L L +L L N I+ + + L +LK+L + N++ ++ L
Sbjct: 84 LNLTATGISDLRPLSSFTRLNRLILHKNNITDLAPLTTLPELKILYVAGNQVEDLKPLSS 143
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
++ L EL L NKIS I L+SLT L +L L N++ ++ L +LTNLT+L L N ++
Sbjct: 144 MSGLTELVLQTNKISDISPLSSLTNLKLLYLGFNQVSDLKPLSSLTNLTELSLPGNKISD 203
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
I L S + L+++ N+IS ++ + LT+L E +N N VS+ + L N L I
Sbjct: 204 ISPLSSLTNVTELNLSSNQISDLRPLQPLTQLSELNLNGNNVSNIIPLTTLPN---LTEI 260
Query: 288 YLDRNPVAQDPNYRRKIKLVCP 309
YL NPV VCP
Sbjct: 261 YLFNNPVESQ---------VCP 273
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 96/167 (57%), Gaps = 6/167 (3%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I + + T L L L+ N +T + L TL L+IL ++ N++ ++K L ++ L +L
Sbjct: 91 ISDLRPLSSFTRLNRLILHKNNITDLAPLTTLPELKILYVAGNQVEDLKPLSSMSGLTEL 150
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L +NKIS I + L LK+L LG N++ ++ L LTNL EL L NKIS I L+SL
Sbjct: 151 VLQTNKISDISPLSSLTNLKLLYLGFNQVSDLKPLSSLTNLTELSLPGNKISDISPLSSL 210
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSEN------GLTTIENL 231
T + L+L N++ + L+ LT L++L L+ N LTT+ NL
Sbjct: 211 TNVTELNLSSNQISDLRPLQPLTQLSELNLNGNNVSNIIPLTTLPNL 257
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 65/121 (53%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ L+L+ N I I + LT LK L L NQ++ ++ L +L NL L L N+I +I
Sbjct: 147 LTELVLQTNKISDISPLSSLTNLKLLYLGFNQVSDLKPLSSLTNLTELSLPGNKISDISP 206
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L N+ +L L SN+IS + + L +L L L N + I L L NL E+YL N
Sbjct: 207 LSSLTNVTELNLSSNQISDLRPLQPLTQLSELNLNGNNVSNIIPLTTLPNLTEIYLFNNP 266
Query: 181 I 181
+
Sbjct: 267 V 267
>gi|427722688|ref|YP_007069965.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
gi|427354408|gb|AFY37131.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
Length = 1183
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 145/251 (57%), Gaps = 11/251 (4%)
Query: 59 VCIERLLLRWNLIKKI-ENIHMLTTLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIR 116
V +++L L IK+I +++ L L++L LY+NQ+ I ++L L NL+ L L+FNRI+
Sbjct: 186 VSLQQLHLNDTGIKEIPDSLAALVNLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIK 245
Query: 117 EIK-GLDHLANLEKLYLCSNKISKI-ENVDHLKKLKVLELGDNKIRIIENLDG-LTNLEE 173
+I L LA+L++L L N+IS+I ++ LK L+ L+LG N+I+ I + G L +L++
Sbjct: 246 KIPDSLAKLASLQQLDLNINQISEIPDSFATLKNLQKLDLGSNQIKKIPDSFGKLASLQQ 305
Query: 174 LYLGKNKISRI-DNLASLTKLNILSLQCNRLRTI-ENLEALTNLTQLYLSENGLTTIENL 231
L LG N+I +I D+ L L L+L N++ I ++ L NL QLYL N + + +
Sbjct: 306 LNLGSNQIKKIPDSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQLYLYNNPIKEVPDS 365
Query: 232 LSN-EKLETLDVAYNKIS-IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYL 289
L+ L+ L + N+I I ++A L LQ+ I+ NQ+ + + L LQ + L
Sbjct: 366 LATLVNLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKE--IPDSLAALTHLQNLGL 423
Query: 290 DRNPVAQDPNY 300
+ + P++
Sbjct: 424 SSTQITEIPDF 434
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 115/226 (50%), Gaps = 33/226 (14%)
Query: 77 IHMLTTLKELELYDNQLTVI-ENLDTLINLEILDLSFN-RIREIK--------------- 119
I LK+L L NQ+ I E+L LINL+ LDLS N +I+EI
Sbjct: 88 ITKFPKLKQLNLSFNQIKEIPESLSALINLQQLDLSANHQIKEIPDSLSALINLQQLDLS 147
Query: 120 ----------GLDHLANLEKLYLCSNKISKIENV-DHLKKLKVLELGDNKIR-IIENLDG 167
L L NL++L L N I +I V L L+ L L D I+ I ++L
Sbjct: 148 ANHQIKEIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLAA 207
Query: 168 LTNLEELYLGKNKISRI-DNLASLTKLNILSLQCNRLRTI-ENLEALTNLTQLYLSENGL 225
L NL++LYL N+I I D+LA+L+ L L L NR++ I ++L L +L QL L+ N +
Sbjct: 208 LVNLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQQLDLNINQI 267
Query: 226 TTIENLLSNEK-LETLDVAYNKI-SIIQNIAHLTELQEFWINDNQV 269
+ I + + K L+ LD+ N+I I + L LQ+ + NQ+
Sbjct: 268 SEIPDSFATLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQI 313
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 81/132 (61%), Gaps = 7/132 (5%)
Query: 59 VCIERLLLRWNLIKKI-ENIHMLTTLKELELYDNQLTVIEN-LDTLINLEILDLSFNRIR 116
V +++L + N IK+I +++ LT L+ L L Q+T I + L TL+NL+ L+LSFN+I+
Sbjct: 393 VNLQQLDISSNQIKEIPDSLAALTHLQNLGLSSTQITEIPDFLSTLVNLQQLNLSFNQIK 452
Query: 117 EIK-GLDHLANLEKLYLCSNKISKIEN-VDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
+I LA+L+ LYLCSN+I+KI + +++L L+ L+L N I + + G EEL
Sbjct: 453 KIPDSFVKLASLQALYLCSNQITKIPSFLENLPALQKLDLRLNPIPVSPEILG---SEEL 509
Query: 175 YLGKNKISRIDN 186
Y + I N
Sbjct: 510 YENPGSVKDIFN 521
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 103/183 (56%), Gaps = 15/183 (8%)
Query: 59 VCIERLLLRWNLIKKI-ENIHMLTTLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIR 116
V +++L L N IK++ +++ L L++L NQ+ I ++L TL+NL+ LD+S N+I+
Sbjct: 347 VNLQQLYLYNNPIKEVPDSLATLVNLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIK 406
Query: 117 EIK-GLDHLANLEKLYLCSNKISKIEN-VDHLKKLKVLELGDNKI-RIIENLDGLTNLEE 173
EI L L +L+ L L S +I++I + + L L+ L L N+I +I ++ L +L+
Sbjct: 407 EIPDSLAALTHLQNLGLSSTQITEIPDFLSTLVNLQQLNLSFNQIKKIPDSFVKLASLQA 466
Query: 174 LYLGKNKISRI----DNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
LYL N+I++I +NL +L KL++ RL I + +LY + + I
Sbjct: 467 LYLCSNQITKIPSFLENLPALQKLDL------RLNPIPVSPEILGSEELYENPGSVKDIF 520
Query: 230 NLL 232
N L
Sbjct: 521 NYL 523
>gi|419761284|ref|ZP_14287540.1| internalin-A [Thermosipho africanus H17ap60334]
gi|407513590|gb|EKF48487.1| internalin-A [Thermosipho africanus H17ap60334]
Length = 598
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 132/242 (54%), Gaps = 9/242 (3%)
Query: 54 EESKEVCI------ERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEI 107
EE K++ + E L L ++ ++ + + L+ L+L ++++ + L L L
Sbjct: 36 EEDKDITVQDMWELENLSLSFSSVRDLSGLEYAVNLESLDLSNSEVPDLSPLAKLPKLVK 95
Query: 108 LDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG 167
LDLS I ++ L +L NL L L N+IS I + KL++L+L N I I L
Sbjct: 96 LDLSGCGIEDLSLLPNLPNLISLRLSGNEISDISPLTKFSKLRMLDLSSNIISDISPLKD 155
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
L NLEEL L NKIS I L++LTKL L L NR+ I +L LTNL +L LS N ++
Sbjct: 156 LPNLEELNLSVNKISDITPLSNLTKLKRLDLSYNRISDISSLTNLTNLEELVLSYNEISD 215
Query: 228 IENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTI 287
I L + L LD++ N+IS I + LT L+ + +N++SD +++L N L+ +
Sbjct: 216 ISPLANLPNLAGLDLSNNEISDISPLKDLTNLELLDLAENEISD---ISLLFNLTSLREL 272
Query: 288 YL 289
Y+
Sbjct: 273 YV 274
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 99/209 (47%), Gaps = 25/209 (11%)
Query: 105 LEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD-------- 156
LE L LSF+ +R++ GL++ NLE L L ++++ + + L KL L+L
Sbjct: 366 LENLSLSFSSVRDLSGLEYAVNLESLDLSNSEVPDLSPLAKLPKLVKLDLSGCGIEDLSL 425
Query: 157 --------------NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
N+I I L + L L L N IS I LA LTKL L L N
Sbjct: 426 LPNLPNLISLRLSGNEISDISPLTKFSKLRMLDLSSNIISDISPLAKLTKLRFLDLYANE 485
Query: 203 LRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEF 262
+ + L LT L L S+N + I L+ KL L++ YNKI+ I +++LT L
Sbjct: 486 VSDVSPLAKLTKLRVLDFSQNKVNDISPLVKLTKLRVLELQYNKINDISPLSNLTNLIGL 545
Query: 263 WINDNQVSDWNTVNVLENNKQLQTIYLDR 291
+ N++SD + + L L+ +Y R
Sbjct: 546 DLTGNKISDISPLFSLSG---LKGLYFSR 571
>gi|423473486|ref|ZP_17450228.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG6O-2]
gi|402425355|gb|EJV57502.1| LPXTG-domain-containing protein cell wall anchor domain [Bacillus
cereus BAG6O-2]
Length = 969
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 125/228 (54%), Gaps = 4/228 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ LDLS N I I+ + L NL+ L
Sbjct: 233 INEIAGLEYMTNLEKLTLRESNVTDISVISELRHLKYLDLSSNPIESIQPVSKLENLDML 292
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKI+ + + +KK+K L+L N I+ + L +++L+E+YL N+IS + + L
Sbjct: 293 FLRDNKIADLTPLSQMKKIKTLDLIGNNIKDLTPLFTVSSLKEVYLANNQISNLSGIEKL 352
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ +L + N++ +E + ++NL +L ++++ + I L KL+ L++ N IS I
Sbjct: 353 KDVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENYISDI 412
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPV 294
+ LT L E + N++ D V L + Q Q I+LD V
Sbjct: 413 SALGELTNLHEVNLVANEIFDIRPVQELGKRIWIDIQRQKIFLDEASV 460
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 94/158 (59%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I+ I+ + L L L L DN++ + L + ++ LDL N I+++ L ++
Sbjct: 272 LSSNPIESIQPVSKLENLDMLFLRDNKIADLTPLSQMKKIKTLDLIGNNIKDLTPLFTVS 331
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+L+++YL +N+IS + ++ LK +K+L +G+NKI +E + ++NL EL + ++I I
Sbjct: 332 SLKEVYLANNQISNLSGIEKLKDVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDIS 391
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN 223
L+ L KL +L+L+ N + I L LTNL ++ L N
Sbjct: 392 PLSKLGKLQVLNLEENYISDISALGELTNLHEVNLVAN 429
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 85/152 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L LR N I + + + +K L+L N + + L T+ +L+ + L+ N+I + G
Sbjct: 289 LDMLFLRDNKIADLTPLSQMKKIKTLDLIGNNIKDLTPLFTVSSLKEVYLANNQISNLSG 348
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
++ L +++ L++ +NKIS +E + + L LE+ D++I+ I L L L+ L L +N
Sbjct: 349 IEKLKDVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISPLSKLGKLQVLNLEENY 408
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEAL 212
IS I L LT L+ ++L N + I ++ L
Sbjct: 409 ISDISALGELTNLHEVNLVANEIFDIRPVQEL 440
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 58/113 (51%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+ + NLE L L + IE + +LK+L + +
Sbjct: 563 EDLLQIKTLEILREKGKEIKDVTGLESMVNLENLTLEGVGLKNIEFISNLKQLNAMNVSH 622
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
N+I I L L NL+ L L N++ + L S+ L L L N +R + L
Sbjct: 623 NQIEDITPLSLLKNLQWLNLADNRVKDVSVLGSMLDLISLKLAGNEIRDVRPL 675
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V +E L L +K IE I L L + + NQ+ I L L NL+ L+L+ NR++++
Sbjct: 591 VNLENLTLEGVGLKNIEFISNLKQLNAMNVSHNQIEDITPLSLLKNLQWLNLADNRVKDV 650
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKI 159
L + +L L L N+I + + L + +++G KI
Sbjct: 651 SVLGSMLDLISLKLAGNEIRDVRPLIQLGQWFTIDVGRQKI 691
>gi|313216177|emb|CBY37534.1| unnamed protein product [Oikopleura dioica]
gi|313222335|emb|CBY39282.1| unnamed protein product [Oikopleura dioica]
Length = 442
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 112/197 (56%)
Query: 105 LEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIEN 164
LE LDL ++ ++ L +L+ + L N+I+ + N+ +L+ L L+L DN+I + +
Sbjct: 85 LERLDLENRQLEKVPDLRQEESLKLINLQQNRINDLTNLKYLRNLVFLDLYDNEISDLFH 144
Query: 165 LDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENG 224
L L NL L LGKNKI RI L +LTKL++L + N + + L ++L L L+ N
Sbjct: 145 LQPLINLRVLMLGKNKIDRIHGLENLTKLDVLDMHSNNISELSGLTHQSSLRVLNLAGNK 204
Query: 225 LTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQL 284
++ + L E L L+V+ N++ +Q++ L L +++ N+++ W + L ++ L
Sbjct: 205 ISQVHGLQKLESLAELNVSRNQVVNVQDLEKLPYLASVYLSYNKIAKWEDIWCLGDSVSL 264
Query: 285 QTIYLDRNPVAQDPNYR 301
+ + LD NP+ + +YR
Sbjct: 265 KELALDGNPLTFENSYR 281
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 10/186 (5%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L+ N I + N+ L L L+LYDN+++ + +L LINL +L L N+I I GL++L
Sbjct: 112 LQQNRINDLTNLKYLRNLVFLDLYDNEISDLFHLQPLINLRVLMLGKNKIDRIHGLENLT 171
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
L+ L + SN IS++ + H L+VL L NKI + L L +L EL + +N++ +
Sbjct: 172 KLDVLDMHSNNISELSGLTHQSSLRVLNLAGNKISQVHGLQKLESLAELNVSRNQVVNVQ 231
Query: 186 NLASLTKLNILSLQCNRLRTIENLEAL---TNLTQLYLSENGLTTIEN------LLSNEK 236
+L L L + L N++ E++ L +L +L L N L T EN L S K
Sbjct: 232 DLEKLPYLASVYLSYNKIAKWEDIWCLGDSVSLKELALDGNPL-TFENSYRYTVLASGIK 290
Query: 237 LETLDV 242
L+ LD
Sbjct: 291 LKMLDA 296
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 93/171 (54%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+ERL L ++K+ ++ +LK + L N++ + NL L NL LDL N I ++
Sbjct: 85 LERLDLENRQLEKVPDLRQEESLKLINLQQNRINDLTNLKYLRNLVFLDLYDNEISDLFH 144
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L NL L L NKI +I +++L KL VL++ N I + L ++L L L NK
Sbjct: 145 LQPLINLRVLMLGKNKIDRIHGLENLTKLDVLDMHSNNISELSGLTHQSSLRVLNLAGNK 204
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
IS++ L L L L++ N++ +++LE L L +YLS N + E++
Sbjct: 205 ISQVHGLQKLESLAELNVSRNQVVNVQDLEKLPYLASVYLSYNKIAKWEDI 255
>gi|386052544|ref|YP_005970102.1| internalin D [Listeria monocytogenes Finland 1998]
gi|346645195|gb|AEO37820.1| internalin D [Listeria monocytogenes Finland 1998]
Length = 567
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 23/239 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +E + L L L L +N++T + L L L IL+ S N++ +I L ++ NL +L
Sbjct: 86 IASLEGVQYLNNLDTLVLNNNKITDLNPLAGLTKLNILEASNNQLSDINALSNVTNLHQL 145
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+I ++ V +L L+ +EL +N+I I + GL NL L + NKIS + ++ L
Sbjct: 146 RLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGL 205
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+KLN L+ N+ I +L L+NL +E + + N+IS +
Sbjct: 206 SKLNHLTADSNQ---ISDLRPLSNL-------------------AAMEVMRLDGNQISDV 243
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
IA+L L ++ +NQ+SD +++ L N+ I LD + +P ++ +LV P
Sbjct: 244 TPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 301
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 96/171 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L+L N I + + LT L LE +NQL+ I L + NL L L N+I+++ G
Sbjct: 98 LDTLVLNNNKITDLNPLAGLTKLNILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNG 157
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ +L NLE + L +N+I+ I V LK L L + +NKI + + GL+ L L N+
Sbjct: 158 VSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQ 217
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
IS + L++L + ++ L N++ + + L NL ++L+EN ++ I +L
Sbjct: 218 ISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSL 268
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI ++LAN K L + + L ++ + + I +E + L NL+ L
Sbjct: 42 INEIFTDENLANAIKTTLSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYLNNLDTL 101
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIENL 231
L NKI+ ++ LA LTKLNIL N+L I L +TNL QL L N L + NL
Sbjct: 102 VLNNNKITDLNPLAGLTKLNILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNGVSNL 161
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 162 IN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 206
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINL--------EILDLS- 111
+ +L L N IK++ + L L+ +EL +NQ+T I + L NL +I DLS
Sbjct: 142 LHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSP 201
Query: 112 -------------FNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
N+I +++ L +LA +E + L N+IS + + +L L + L +N+
Sbjct: 202 ISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQ 261
Query: 159 IRIIENLDGLTNLEELY 175
I I +L L N +
Sbjct: 262 ISDISSLQPLFNSPNFF 278
>gi|421090942|ref|ZP_15551731.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
gi|410000269|gb|EKO50914.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
Length = 400
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 141/242 (58%), Gaps = 13/242 (5%)
Query: 77 IHMLTTLKELELYDNQL-TVIENLDTLINLEILDLSFNRIREI-KGLDHLANLEKLYLCS 134
I L L+ L L++NQL T+ E + L NL++L+LS+N+I+ I K ++ L L+ L L +
Sbjct: 157 IGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGN 216
Query: 135 NKISKIEN-VDHLKKLKVLELGDNKIRIIENLDG-LTNLEELYLGKNKISRIDN-LASLT 191
N+++ + N + L+KL+ L L N++ + N G L NL++LYLG N+++ + N + L
Sbjct: 217 NQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLK 276
Query: 192 KLNILSLQCNRLRTI-ENLEALTNLTQLYLSENGLTTIENLLSNEK-LETLDVAYNKISI 249
L L L+ NRL T+ +++E L NL L L N LTT + K L+ LD+ N+++
Sbjct: 277 NLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTT 336
Query: 250 I-QNIAHLTELQEFWINDNQVSDW-NTVNVLENNKQLQTIYLDRNPVAQDPNYR-RKIKL 306
+ + I L LQ F +N+NQ++ + L+N LQ +YL N ++ + R RK+
Sbjct: 337 LPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQN---LQELYLIDNQLSSEEKERIRKLLP 393
Query: 307 VC 308
C
Sbjct: 394 KC 395
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 143/270 (52%), Gaps = 34/270 (12%)
Query: 61 IERLLLRWNLIKKI-ENIHMLTTLKELELYDNQL-TVIENLDTLINLEILDLSFNRIREI 118
++ L L +N +K + + I L L+ LEL NQL T+ E ++ L NL+ L LS+N+++ +
Sbjct: 71 LQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTL 130
Query: 119 -KGLDHLANLEKLYLCSNKISKI------------------------ENVDHLKKLKVLE 153
K + L NL++LYL N+++ + E + LK L+VLE
Sbjct: 131 PKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLE 190
Query: 154 LGDNKIRII-ENLDGLTNLEELYLGKNKISRIDN-LASLTKLNILSLQCNRLRTIEN-LE 210
L N+I+ I + ++ L L+ L LG N+++ + N + L KL LSL NRL T+ N +
Sbjct: 191 LSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIG 250
Query: 211 ALTNLTQLYLSENGLTTIENLLSNEK-LETLDVAYNKISII-QNIAHLTELQEFWINDNQ 268
L NL LYL N LT + N + K L+TL + N+++ + ++I L L+ + +NQ
Sbjct: 251 QLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQ 310
Query: 269 VSDWNTVNVLENNKQLQTIYLDRNPVAQDP 298
++ + +E K LQ + L N + P
Sbjct: 311 LTTF--PKEIEQLKNLQVLDLGSNQLTTLP 338
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 117/205 (57%), Gaps = 11/205 (5%)
Query: 103 INLEILDLSFNRIREI-KGLDHLANLEKLYLCSNKISKI-ENVDHLKKLKVLELGDNKIR 160
+++ +LDLS +++ + K + L NL++LYL N++ + + + L+ L+VLEL N+++
Sbjct: 46 LDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLK 105
Query: 161 II-ENLDGLTNLEELYLGKNKISRIDN-LASLTKLNILSLQCNRLRTIEN-LEALTNLTQ 217
+ E ++ L NL+ LYL N++ + + L L L L+ N+L T+ + L NL +
Sbjct: 106 TLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQR 165
Query: 218 LYLSENGLTTIENLLSNEK-LETLDVAYNKI-SIIQNIAHLTELQEFWINDNQVSDW-NT 274
L+L N L T+ + K L+ L+++YN+I +I + I L +LQ + +NQ++ N
Sbjct: 166 LHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNE 225
Query: 275 VNVLENNKQLQTIYLDRNPVAQDPN 299
+ L+ +LQ + L N + PN
Sbjct: 226 IGQLQ---KLQELSLSTNRLTTLPN 247
>gi|405756198|ref|YP_006679662.1| hypothetical protein LMOSLCC2540_2119 [Listeria monocytogenes
SLCC2540]
gi|404225398|emb|CBY76760.1| leucine-rich repeat domain protein (LPXTG motif) [Listeria
monocytogenes SLCC2540]
Length = 572
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 110/201 (54%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I IE + LT L+ L + +NQ++ + + L NLE L L+ N+I ++ L L N+ L
Sbjct: 88 IASIEGVQYLTNLRNLYMDNNQISNLTPISGLANLETLHLNNNQISDLGSLSGLINIRNL 147
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+ +N++S + + L L+ L+L +N+I + +L TNL L + N+IS + ++ L
Sbjct: 148 IMDNNQVSDLTPLSGLISLQTLQLNNNQISDLSSLSNATNLWALSINNNQISDLTPISRL 207
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
T L +L L N++ + + TNL LYL N ++ + + L L + N+IS I
Sbjct: 208 TNLEVLHLNNNQVSNLTPISDFTNLAILYLDNNQVSDLTPISGFTNLSILHLNNNQISNI 267
Query: 251 QNIAHLTELQEFWINDNQVSD 271
++ T L E +++NQ+SD
Sbjct: 268 GVLSDFTSLSEILLDNNQISD 288
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 107/198 (54%), Gaps = 7/198 (3%)
Query: 99 LDTLINLEILD-LSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
L+ + +E+ D LS I I+G+ +L NL LY+ +N+IS + + L L+ L L +N
Sbjct: 74 LNVVGGIEVFDELS---IASIEGVQYLTNLRNLYMDNNQISNLTPISGLANLETLHLNNN 130
Query: 158 KIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQ 217
+I + +L GL N+ L + N++S + L+ L L L L N++ + +L TNL
Sbjct: 131 QISDLGSLSGLINIRNLIMDNNQVSDLTPLSGLISLQTLQLNNNQISDLSSLSNATNLWA 190
Query: 218 LYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNV 277
L ++ N ++ + + LE L + N++S + I+ T L ++++NQVSD ++
Sbjct: 191 LSINNNQISDLTPISRLTNLEVLHLNNNQVSNLTPISDFTNLAILYLDNNQVSDLTPISG 250
Query: 278 LENNKQLQTIYLDRNPVA 295
N L ++L+ N ++
Sbjct: 251 FTN---LSILHLNNNQIS 265
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 95/171 (55%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L L N I + ++ L ++ L + +NQ++ + L LI+L+ L L+ N+I ++
Sbjct: 122 LETLHLNNNQISDLGSLSGLINIRNLIMDNNQVSDLTPLSGLISLQTLQLNNNQISDLSS 181
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L + NL L + +N+IS + + L L+VL L +N++ + + TNL LYL N+
Sbjct: 182 LSNATNLWALSINNNQISDLTPISRLTNLEVLHLNNNQVSNLTPISDFTNLAILYLDNNQ 241
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
+S + ++ T L+IL L N++ I L T+L+++ L N ++ + L
Sbjct: 242 VSDLTPISGFTNLSILHLNNNQISNIGVLSDFTSLSEILLDNNQISDLSAL 292
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 89/161 (55%), Gaps = 3/161 (1%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
S + I L++ N + + + L +L+ L+L +NQ++ + +L NL L ++ N+I
Sbjct: 139 SGLINIRNLIMDNNQVSDLTPLSGLISLQTLQLNNNQISDLSSLSNATNLWALSINNNQI 198
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++ + L NLE L+L +N++S + + L +L L +N++ + + G TNL L+
Sbjct: 199 SDLTPISRLTNLEVLHLNNNQVSNLTPISDFTNLAILYLDNNQVSDLTPISGFTNLSILH 258
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
L N+IS I L+ T L+ + L N+ I +L AL +++
Sbjct: 259 LNNNQISNIGVLSDFTSLSEILLDNNQ---ISDLSALKDIS 296
>gi|428181204|gb|EKX50069.1| hypothetical protein GUITHDRAFT_67394, partial [Guillardia theta
CCMP2712]
Length = 1326
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 129/246 (52%), Gaps = 28/246 (11%)
Query: 43 EAETTESKAEDEESKEV-CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDT 101
EA K EE + V IE L ++ KI+++ + T L L + + IE LD
Sbjct: 20 EANGISDKVAQEEPESVKQIEMFLFNFS---KIQSLDIFTGLTSLFICQQAIYEIECLDA 76
Query: 102 LINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRI 161
L +LE L + I +IKGLD+ LE+L+L SNKI K+EN+ HL ++ L L DN+I
Sbjct: 77 LRHLESLWICETNISKIKGLDNNIKLERLFLYSNKIRKLENLQHLTLIQTLWLQDNEISE 136
Query: 162 IENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLS 221
IENLD L NL++L L +NKI I + +L++ TNL++L L+
Sbjct: 137 IENLDSLCNLKQLSLARNKIHEIGS---------------------SLDSCTNLSELNLA 175
Query: 222 ENGLTTIENLLSNEKLETL-DVAYNKISIIQN-IAHLTELQEF-WINDNQVSDWNTVNVL 278
N L + ++LL+ + +L +A+N N + L Q + + + Q+S +T+ +
Sbjct: 176 GNELWSFKDLLNITRSTSLRKLAFNDPDWGDNPVCDLCNYQTYVFFHLQQLSHMDTLPIP 235
Query: 279 ENNKQL 284
E KQL
Sbjct: 236 EEGKQL 241
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 95/173 (54%), Gaps = 17/173 (9%)
Query: 104 NLEILDLSFNRIREIKGLDHLANLEKLYLCSNKI-------------SKIENVDHLKKLK 150
NL IL+L N I ++ G+ L++L L L N+I + + V L+
Sbjct: 1067 NLRILNLDNNLITDLTGIADLSSLSVLRLNHNRIENLLPEKQRNGSDAPVVPVIAFSSLE 1126
Query: 151 VLELGDNKIRIIENLD--GLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIE- 207
VL+LG N+I + +L L+NL+ L++ N ISRID L +LT++ L L N++R +E
Sbjct: 1127 VLQLGFNEIHSLASLRLLPLSNLKVLFVQGNDISRIDGLENLTQVRELVLDKNKIRHVEY 1186
Query: 208 -NLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTEL 259
L NL +LY+ ENGL ++ N L KL+ L V N+IS + +I L+ L
Sbjct: 1187 GAFSPLKNLRELYIEENGLKSLSNFLPLPKLQVLHVGSNRISEMSDIDKLSPL 1239
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 130/296 (43%), Gaps = 75/296 (25%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTL----INLEILDLSFNR 114
V ++ L L +NLI++++N+ L+TL LE+ +N L E+L L NL +L+LS N
Sbjct: 719 VSLKTLDLSFNLIRRLDNLKTLSTLTSLEVNNNLLYRAEDLSALRKYTPNLIVLNLSNNA 778
Query: 115 IREIKG-----LDHLANLEKL--------------------------------------- 130
+ E+K L L LE L
Sbjct: 779 VCELKSYRFYVLRRLLKLEMLDGRKVSESERQEALTNTSSIKLNMIKECAFVQRRSTWSL 838
Query: 131 -----YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
L + K+ N++ L L+VL + DN+I ++ L+ T LEEL + +N+IS+I+
Sbjct: 839 LPQSHRLNHRHLRKLSNLEKLVNLRVLSVCDNEILSLQGLERCTLLEELLMEENRISKIE 898
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
L++L L L L N++ IE LE LTN+ QL L +N + T+ L + L L V N
Sbjct: 899 FLSTLVNLKKLDLGKNKIARIEGLEGLTNIVQLSLEDNEIETLSGLNTLTTLLELYVGNN 958
Query: 246 KISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYR 301
K+ + I L L + I D L NPVA +YR
Sbjct: 959 KVEETKQILQLRPLPKLIIFD----------------------LSGNPVATRGDYR 992
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Query: 50 KAEDEESKEVCIERLLLRWNLIKKIENIHMLTTLKEL----ELYDNQLTVIENLDTLINL 105
K + E +E ++ N+IK+ + +T L L L + NL+ L+NL
Sbjct: 803 KVSESERQEALTNTSSIKLNMIKECAFVQRRSTWSLLPQSHRLNHRHLRKLSNLEKLVNL 862
Query: 106 EILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENL 165
+L + N I ++GL+ LE+L + N+ISKIE + L LK L+LG NKI IE L
Sbjct: 863 RVLSVCDNEILSLQGLERCTLLEELLMEENRISKIEFLSTLVNLKKLDLGKNKIARIEGL 922
Query: 166 DGLTNLEELYLGKNKI 181
+GLTN+ +L L N+I
Sbjct: 923 EGLTNIVQLSLEDNEI 938
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L+ +K L L+ N + +ENL L+NLE L LSFN I +I+GL+ +L+ L L N I +
Sbjct: 674 LSNVKYLNLHSNSIKKLENLTGLVNLETLILSFNEISKIEGLETFVSLKTLDLSFNLIRR 733
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGL----TNLEELYLGKNKIS-----RIDNLASL 190
++N+ L L LE+ +N + E+L L NL L L N + R L L
Sbjct: 734 LDNLKTLSTLTSLEVNNNLLYRAEDLSALRKYTPNLIVLNLSNNAVCELKSYRFYVLRRL 793
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYL 220
KL + L ++ E EALTN + + L
Sbjct: 794 LKLEM--LDGRKVSESERQEALTNTSSIKL 821
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%)
Query: 146 LKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRT 205
L +K L L N I+ +ENL GL NLE L L N+IS+I+ L + L L L N +R
Sbjct: 674 LSNVKYLNLHSNSIKKLENLTGLVNLETLILSFNEISKIEGLETFVSLKTLDLSFNLIRR 733
Query: 206 IENLEALTNLTQLYLSENGLTTIENL 231
++NL+ L+ LT L ++ N L E+L
Sbjct: 734 LDNLKTLSTLTSLEVNNNLLYRAEDL 759
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 110 LSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLT 169
L+ +R++ L+ L NL L +C N+I ++ ++ L+ L + +N+I IE L L
Sbjct: 845 LNHRHLRKLSNLEKLVNLRVLSVCDNEILSLQGLERCTLLEELLMEENRISKIEFLSTLV 904
Query: 170 NLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE 229
NL++L LGKNKI+RI+ L LT + LSL+ N + T+ L LT L +LY+ N + +
Sbjct: 905 NLKKLDLGKNKIARIEGLEGLTNIVQLSLEDNEIETLSGLNTLTTLLELYVGNNKVEETK 964
Query: 230 NLLSNEKLETL---DVAYNKISI-----IQNIAHLTELQ 260
+L L L D++ N ++ + I HL +L+
Sbjct: 965 QILQLRPLPKLIIFDLSGNPVATRGDYRLYTIFHLKKLK 1003
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 118/242 (48%), Gaps = 31/242 (12%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
V +E L+L +N I KIE + +LK L+L N + ++NL TL L L+++ N +
Sbjct: 697 VNLETLILSFNEISKIEGLETFVSLKTLDLSFNLIRRLDNLKTLSTLTSLEVNNNLLYRA 756
Query: 119 KGLDHL----ANLEKLYLCSNKISKIENVDH--LKKLKVLELGDN-KIRIIENLDGLTNL 171
+ L L NL L L +N + ++++ L++L LE+ D K+ E + LTN
Sbjct: 757 EDLSALRKYTPNLIVLNLSNNAVCELKSYRFYVLRRLLKLEMLDGRKVSESERQEALTNT 816
Query: 172 EELYLGKNK------------------------ISRIDNLASLTKLNILSLQCNRLRTIE 207
+ L K + ++ NL L L +LS+ N + +++
Sbjct: 817 SSIKLNMIKECAFVQRRSTWSLLPQSHRLNHRHLRKLSNLEKLVNLRVLSVCDNEILSLQ 876
Query: 208 NLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDN 267
LE T L +L + EN ++ IE L + L+ LD+ NKI+ I+ + LT + + + DN
Sbjct: 877 GLERCTLLEELLMEENRISKIEFLSTLVNLKKLDLGKNKIARIEGLEGLTNIVQLSLEDN 936
Query: 268 QV 269
++
Sbjct: 937 EI 938
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 13/188 (6%)
Query: 80 LTTLKELELYDNQLTVIENLD--TLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKI 137
++L+ L+L N++ + +L L NL++L + N I I GL++L + +L L NKI
Sbjct: 1122 FSSLEVLQLGFNEIHSLASLRLLPLSNLKVLFVQGNDISRIDGLENLTQVRELVLDKNKI 1181
Query: 138 SKIE--NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISR---IDNLASLTK 192
+E LK L+ L + +N ++ + N L L+ L++G N+IS ID L+ L
Sbjct: 1182 RHVEYGAFSPLKNLRELYIEENGLKSLSNFLPLPKLQVLHVGSNRISEMSDIDKLSPLPA 1241
Query: 193 LNILSLQCNRL--RTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA----YNK 246
+ L+L N + + + A+ L L L +N T+E + L T+D Y
Sbjct: 1242 VVDLTLANNPVARKQLYRATAIQKLPTLKLLDNKEVTVEERERVDILFTIDARNNSNYPS 1301
Query: 247 ISIIQNIA 254
++ Q +A
Sbjct: 1302 QAVAQAVA 1309
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 188 ASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKI 247
A L+ + L+L N ++ +ENL L NL L LS N ++ IE L + L+TLD+++N I
Sbjct: 672 ADLSNVKYLNLHSNSIKKLENLTGLVNLETLILSFNEISKIEGLETFVSLKTLDLSFNLI 731
Query: 248 SIIQNIAHLTELQEFWINDN 267
+ N+ L+ L +N+N
Sbjct: 732 RRLDNLKTLSTLTSLEVNNN 751
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 61 IERLLLRWNLIKKIE--NIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+ L+L N I+ +E L L+EL + +N L + N L L++L + NRI E+
Sbjct: 1171 VRELVLDKNKIRHVEYGAFSPLKNLRELYIEENGLKSLSNFLPLPKLQVLHVGSNRISEM 1230
Query: 119 KGLDHLANLEK---LYLCSNKISK--IENVDHLKKLKVLELGDNK 158
+D L+ L L L +N +++ + ++KL L+L DNK
Sbjct: 1231 SDIDKLSPLPAVVDLTLANNPVARKQLYRATAIQKLPTLKLLDNK 1275
>gi|229056326|ref|ZP_04195744.1| hypothetical protein bcere0026_4560 [Bacillus cereus AH603]
gi|228720994|gb|EEL72536.1| hypothetical protein bcere0026_4560 [Bacillus cereus AH603]
Length = 1125
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 129/226 (57%), Gaps = 9/226 (3%)
Query: 78 HMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKI 137
HM+ L++ L++++++ + + L NL+ LDL N+I I+ + L ++ LYL +N+I
Sbjct: 227 HMVN-LEKFRLHESEVSDLSPIANLNNLKFLDLYSNQIENIEPIAGLNKIQDLYLRNNQI 285
Query: 138 SKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILS 197
+ ++ + L K++VL+L NKI I L + +L LY+ N IS + + L K+ LS
Sbjct: 286 TDLKPLSKLSKVRVLDLIGNKIEDITPLFTMASLGNLYVANNNISDLTGMEHLNKVKELS 345
Query: 198 LQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLT 257
+ N + +E++ + +LT+L +S+ +T I L +KL++LD+ N IS + +++ LT
Sbjct: 346 IGNNNITNLESISKMESLTKLAVSDAEITDITPLAKMKKLQSLDLEENYISDVSSLSGLT 405
Query: 258 ELQEFWINDNQVSDWNTVNVLENNKQL------QTIYLDRNPVAQD 297
L E ++ N++SD + E K+ Q I+L+ V +D
Sbjct: 406 NLYELNLSSNEISDVRPIQ--EFGKRFVVQVHRQKIFLNEGVVNED 449
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 103/182 (56%)
Query: 66 LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLA 125
L N I+ IE I L +++L L +NQ+T ++ L L + +LDL N+I +I L +A
Sbjct: 258 LYSNQIENIEPIAGLNKIQDLYLRNNQITDLKPLSKLSKVRVLDLIGNKIEDITPLFTMA 317
Query: 126 NLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRID 185
+L LY+ +N IS + ++HL K+K L +G+N I +E++ + +L +L + +I+ I
Sbjct: 318 SLGNLYVANNNISDLTGMEHLNKVKELSIGNNNITNLESISKMESLTKLAVSDAEITDIT 377
Query: 186 NLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYN 245
LA + KL L L+ N + + +L LTNL +L LS N ++ + + K + V
Sbjct: 378 PLAKMKKLQSLDLEENYISDVSSLSGLTNLYELNLSSNEISDVRPIQEFGKRFVVQVHRQ 437
Query: 246 KI 247
KI
Sbjct: 438 KI 439
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 106/181 (58%), Gaps = 3/181 (1%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I + GL+H+ NLEK L +++S + + +L LK L+L N+I IE + GL +++L
Sbjct: 219 INNLAGLEHMVNLEKFRLHESEVSDLSPIANLNNLKFLDLYSNQIENIEPIAGLNKIQDL 278
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
YL N+I+ + L+ L+K+ +L L N++ I L + +L LY++ N ++ + +
Sbjct: 279 YLRNNQITDLKPLSKLSKVRVLDLIGNKIEDITPLFTMASLGNLYVANNNISDLTGMEHL 338
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV 294
K++ L + N I+ +++I+ + L + ++D +++D + L K+LQ++ L+ N +
Sbjct: 339 NKVKELSIGNNNITNLESISKMESLTKLAVSDAEITD---ITPLAKMKKLQSLDLEENYI 395
Query: 295 A 295
+
Sbjct: 396 S 396
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 2/178 (1%)
Query: 72 KKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLY 131
K I I L +LK + L NQ+ IE L LE L++S N ++ I+ L + +L+KL
Sbjct: 589 KNIAFISNLRSLKSVSLAHNQIENIEPFSKLEKLEKLNISNNNVKNIEPLFKINSLKKLT 648
Query: 132 LCSNKIS--KIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLAS 189
+NKI+ I+ + LK L VL L DN+I +E + ++ L EL L N++ I+ L+
Sbjct: 649 ASNNKINNDTIQGIQELKNLSVLILNDNEISSVEAISEISMLNELELIGNQVVDIEPLSK 708
Query: 190 LTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKI 247
L L L+L NR++ I ++ +L L L N + I ++ + T+D+ KI
Sbjct: 709 LKNLQWLNLSDNRIKDISIFASMLDLISLKLPGNEIQDIRPIIQLSQWSTIDIRRQKI 766
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 20/200 (10%)
Query: 99 LDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
+ L +L+ + L+ N+I I+ L LEKL + +N + IE + + LK L +NK
Sbjct: 594 ISNLRSLKSVSLAHNQIENIEPFSKLEKLEKLNISNNNVKNIEPLFKINSLKKLTASNNK 653
Query: 159 IR--IIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLT 216
I I+ + L NL L L N+IS ++ ++ ++ LN L L N++ IE L L NL
Sbjct: 654 INNDTIQGIQELKNLSVLILNDNEISSVEAISEISMLNELELIGNQVVDIEPLSKLKNLQ 713
Query: 217 QLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVN 276
L LS+N + I S L +L + N+I I+ I Q+S W+T++
Sbjct: 714 WLNLSDNRIKDISIFASMLDLISLKLPGNEIQDIRPII-------------QLSQWSTID 760
Query: 277 VLENNKQLQTIYLDRNPVAQ 296
+ + Q I+LD V Q
Sbjct: 761 I-----RRQKIFLDDAQVNQ 775
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 97/177 (54%), Gaps = 2/177 (1%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + +I + N I+++ G+ ++NLE L L + ++ I + +L+ LK + L
Sbjct: 548 EDLLKIKTFKITNGQGNDIKDVSGIAFMSNLESLELENLELKNIAFISNLRSLKSVSLAH 607
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR--TIENLEALTN 214
N+I IE L LE+L + N + I+ L + L L+ N++ TI+ ++ L N
Sbjct: 608 NQIENIEPFSKLEKLEKLNISNNNVKNIEPLFKINSLKKLTASNNKINNDTIQGIQELKN 667
Query: 215 LTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
L+ L L++N ++++E + L L++ N++ I+ ++ L LQ ++DN++ D
Sbjct: 668 LSVLILNDNEISSVEAISEISMLNELELIGNQVVDIEPLSKLKNLQWLNLSDNRIKD 724
>gi|83629851|gb|ABC26587.1| internalin D [Listeria monocytogenes]
Length = 566
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 23/239 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +E + L L L L +N++T + L L L IL+ S N++ +I L ++ NL +L
Sbjct: 85 IASLEGVQYLNNLDTLVLNNNKITDLNPLAGLTKLNILEASNNQLSDINALSNVTNLHQL 144
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+I ++ V +L L+ +EL +N+I I + GL NL L + NKIS + ++ L
Sbjct: 145 RLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGL 204
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+KLN L+ N+ I +L L+NL +E + + N+IS +
Sbjct: 205 SKLNHLTADSNQ---ISDLRPLSNL-------------------AAMEVMRLDGNQISDV 242
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
IA+L L ++ +NQ+SD +++ L N+ I LD + +P ++ +LV P
Sbjct: 243 TPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 300
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 96/171 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L+L N I + + LT L LE +NQL+ I L + NL L L N+I+++ G
Sbjct: 97 LDTLVLNNNKITDLNPLAGLTKLNILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNG 156
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ +L NLE + L +N+I+ I V LK L L + +NKI + + GL+ L L N+
Sbjct: 157 VSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQ 216
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
IS + L++L + ++ L N++ + + L NL ++L+EN ++ I +L
Sbjct: 217 ISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSL 267
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI ++LAN K L + + L ++ + + I +E + L NL+ L
Sbjct: 41 INEIFTDENLANAIKTTLSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYLNNLDTL 100
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIENL 231
L NKI+ ++ LA LTKLNIL N+L I L +TNL QL L N L + NL
Sbjct: 101 VLNNNKITDLNPLAGLTKLNILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNGVSNL 160
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 161 IN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 205
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINL--------EILDLS- 111
+ +L L N IK++ + L L+ +EL +NQ+T I + L NL +I DLS
Sbjct: 141 LHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSP 200
Query: 112 -------------FNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
N+I +++ L +LA +E + L N+IS + + +L L + L +N+
Sbjct: 201 ISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQ 260
Query: 159 IRIIENLDGLTNLEELY 175
I I +L L N +
Sbjct: 261 ISDISSLQPLFNSPNFF 277
>gi|260832458|ref|XP_002611174.1| hypothetical protein BRAFLDRAFT_88427 [Branchiostoma floridae]
gi|229296545|gb|EEN67184.1| hypothetical protein BRAFLDRAFT_88427 [Branchiostoma floridae]
Length = 896
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 129/230 (56%), Gaps = 17/230 (7%)
Query: 79 MLTTLKELELYDNQLTVIE--NLDTLINLEILDLSFNRIREIKG--LDHLANLEKLYLCS 134
+ T+L +L+L N++T+I+ L L+ L L FN+I ++G +L L+KLYL +
Sbjct: 48 LPTSLTQLDLKRNEITLIQPGTFANLPRLQELQLYFNKIIMLQGGTFANLPRLQKLYLSN 107
Query: 135 NKISKIENVD--HLKKLKVLELGDNKIRII--ENLDGLTNLEELYLGKNKISRI--DNLA 188
N I+ IE +L KL++L L N+I I ++ L L+++ L NKI+ I + A
Sbjct: 108 NLIAMIEPGAFLNLPKLEILRLHHNRITKIHPDSFAYLPQLQKIVLSANKITMIQEGSFA 167
Query: 189 SLTKLNILSLQCNRLRTIEN--LEALTNLTQLYLSENGLTTIE--NLLSNEKLETLDVAY 244
+L +L +L L NR+ I+ L NL QLY + N +T I+ S +L+ LD++Y
Sbjct: 168 NLARLKLLRLHSNRITKIQPGAFVNLPNLQQLYFAYNQITMIQAGTFASLLQLQILDLSY 227
Query: 245 NKISIIQ--NIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN 292
N+I++IQ A+L LQ ++DNQ++ + + QLQ ++L N
Sbjct: 228 NQITLIQTGTFANLPRLQMLGLSDNQITMIQ-AGIFVSLPQLQVLWLSSN 276
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 73/135 (54%), Gaps = 10/135 (7%)
Query: 64 LLLRWNLIKKIENIHM--LTTLKELELYDNQLTVIE--NLDTLINLEILDLSFNRIREIK 119
L L N I KI+ L L++L NQ+T+I+ +L+ L+ILDLS+N+I I+
Sbjct: 175 LRLHSNRITKIQPGAFVNLPNLQQLYFAYNQITMIQAGTFASLLQLQILDLSYNQITLIQ 234
Query: 120 --GLDHLANLEKLYLCSNKISKIEN--VDHLKKLKVLELGDNKIRIIE--NLDGLTNLEE 173
+L L+ L L N+I+ I+ L +L+VL L N+I +I+ L L+
Sbjct: 235 TGTFANLPRLQMLGLSDNQITMIQAGIFVSLPQLQVLWLSSNQITMIQAGAFANLPKLQH 294
Query: 174 LYLGKNKISRIDNLA 188
LYL N +S I NLA
Sbjct: 295 LYLINNNMSEIANLA 309
>gi|402471210|gb|EJW05067.1| hypothetical protein EDEG_00848 [Edhazardia aedis USNM 41457]
Length = 218
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 96/147 (65%), Gaps = 2/147 (1%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E+L++ N I +I ++ +L EL++ DN + IE L+ L L+ LDLSFN I +I+
Sbjct: 21 LEKLIIYHNKISEITDLP--DSLVELDISDNTIKRIEKLENLNELQTLDLSFNLISKIEN 78
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L++ LE+L L +N I+ IEN++ L LK L++ N+I++IENL+ LE+LYL N
Sbjct: 79 LENNTKLERLSLFANDITTIENLESLVNLKHLDISCNEIKVIENLNNNVKLEQLYLANNS 138
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIE 207
IS + +L LT+L +L LQ N+ + I+
Sbjct: 139 ISELPDLTFLTELKVLGLQNNKFKVID 165
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 111/191 (58%), Gaps = 12/191 (6%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
+++I LD NLEKL + NKIS+I D L L++ DN I+ IE L+ L L+ L
Sbjct: 11 LKKIPELD--KNLEKLIIYHNKISEI--TDLPDSLVELDISDNTIKRIEKLENLNELQTL 66
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSN 234
L N IS+I+NL + TKL LSL N + TIENLE+L NL L +S N + IENL +N
Sbjct: 67 DLSFNLISKIENLENNTKLERLSLFANDITTIENLESLVNLKHLDISCNEIKVIENLNNN 126
Query: 235 EKLETLDVAYNKISIIQNIAHLTELQEFWINDN--QVSDWNTVNVLENNKQLQTIYLDRN 292
KLE L +A N IS + ++ LTEL+ + +N +V D N + K + T+ L +N
Sbjct: 127 VKLEQLYLANNSISELPDLTFLTELKVLGLQNNKFKVIDCNLL-----PKSIHTLLLGQN 181
Query: 293 P-VAQDPNYRR 302
+A N +R
Sbjct: 182 SQLANVVNLKR 192
>gi|186681684|ref|YP_001864880.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
gi|186464136|gb|ACC79937.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
Length = 1185
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 131/227 (57%), Gaps = 10/227 (4%)
Query: 80 LTTLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIREI-KGLDHLANLEKLYLCSNKI 137
LT L +L L NQ+T I E L L NL L LS N+I EI + L +L NL +LYL SN+I
Sbjct: 286 LTNLMQLHLSSNQITEIPEALANLTNLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQI 345
Query: 138 SKI-ENVDHLKKLKVLELGDNKI-RIIENLDGLTNLEELYLGKNKISRI-DNLASLTKLN 194
++I E + +L L L L N+I I E L LTNL +L L N+I+ I + LA LT L
Sbjct: 346 TEIPEALANLTNLIQLVLFSNQIAEIPETLANLTNLIQLVLFSNQIAEIPETLAKLTNLT 405
Query: 195 ILSLQCNRLRTIENLEA-LTNLTQLYLSENGLTTIENLLSN-EKLETLDVAYNKISIIQN 252
L L+ N++ I + A LTNLT+L+LS N +T I L+N L L + N+I+ I
Sbjct: 406 RLDLRFNQITQIPKVIANLTNLTELHLSSNQITQIPEALANLTNLTQLYFSSNQITQIPG 465
Query: 253 -IAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDP 298
IA LT L + ++ NQ+++ +E+ +L+ + L NP+ P
Sbjct: 466 AIAKLTNLTQLDLSGNQITE--IPEAIESLSKLEKLDLRGNPLPISP 510
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 130/232 (56%), Gaps = 10/232 (4%)
Query: 75 ENIHMLTTLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIREI-KGLDHLANLEKLYL 132
E I LT L L L NQ+T I E + L NL +L LS N+I EI + + L NL L L
Sbjct: 166 EAIANLTNLTRLNLSSNQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDL 225
Query: 133 CSNKISKI-ENVDHLKKLKVLELGDNKI-RIIENLDGLTNLEELYLGKNKISRI-DNLAS 189
NKI++I E + L VL+L N+I +I E + LTNL+ LYL N+I+ I + LA+
Sbjct: 226 SDNKITEIPEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEALAN 285
Query: 190 LTKLNILSLQCNRLRTI-ENLEALTNLTQLYLSENGLTTIENLLSN-EKLETLDVAYNKI 247
LT L L L N++ I E L LTNLTQLYLS N +T I L+N L L + N+I
Sbjct: 286 LTNLMQLHLSSNQITEIPEALANLTNLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQI 345
Query: 248 S-IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDP 298
+ I + +A+LT L + + NQ+++ L N L + L N +A+ P
Sbjct: 346 TEIPEALANLTNLIQLVLFSNQIAE--IPETLANLTNLIQLVLFSNQIAEIP 395
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 137/245 (55%), Gaps = 10/245 (4%)
Query: 62 ERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVI-ENLDTLINLEILDLSFNRIREI-K 119
E +L+R L + + I LT L +L L NQ+T I E + L NL +L S N+I +I +
Sbjct: 107 ELILIRVELTEIPDAIANLTNLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNKITQIPE 166
Query: 120 GLDHLANLEKLYLCSNKISKI-ENVDHLKKLKVLELGDNKI-RIIENLDGLTNLEELYLG 177
+ +L NL +L L SN+I++I E + L L +L L N+I I E + LTNL L L
Sbjct: 167 AIANLTNLTRLNLSSNQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLS 226
Query: 178 KNKISRI-DNLASLTKLNILSLQCNRLRTI-ENLEALTNLTQLYLSENGLTTIENLLSN- 234
NKI+ I + + T L +L L N++ I E + LTNL LYLS+N +T I L+N
Sbjct: 227 DNKITEIPEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEALANL 286
Query: 235 EKLETLDVAYNKIS-IIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNP 293
L L ++ N+I+ I + +A+LT L + +++ NQ+++ L N L +YL N
Sbjct: 287 TNLMQLHLSSNQITEIPEALANLTNLTQLYLSGNQITE--IPEALANLPNLTRLYLYSNQ 344
Query: 294 VAQDP 298
+ + P
Sbjct: 345 ITEIP 349
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 96/199 (48%), Gaps = 16/199 (8%)
Query: 108 LDLSFNRIREIK-GLDHLANLEKLYLCSNKISKIENV-DH-LKKLKVLELGDNKIRIIEN 164
LDLS + E+ + L LE L L K+ E V DH L+K+ G+N +
Sbjct: 21 LDLSGQELTELPVEIGKLQQLESLIL-GKKVEGYERVGDHFLEKVS----GNNLKTLPLE 75
Query: 165 LDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEA---LTNLTQLYLS 221
L GL NL +L + N + I ++ + L++ L R+ E +A LTNLTQL LS
Sbjct: 76 LLGLPNLRKLDISGNPLESIPDVVTQI-LHLEELILIRVELTEIPDAIANLTNLTQLILS 134
Query: 222 ENGLTTIENLLSN-EKLETLDVAYNKIS-IIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
N +T I ++ L L + NKI+ I + IA+LT L ++ NQ++ V+
Sbjct: 135 YNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQIT--QIPEVIA 192
Query: 280 NNKQLQTIYLDRNPVAQDP 298
L +YL N + + P
Sbjct: 193 KLTNLTLLYLSGNQITEIP 211
>gi|229165490|ref|ZP_04293271.1| hypothetical protein bcere0007_4770 [Bacillus cereus AH621]
gi|228617977|gb|EEK75021.1| hypothetical protein bcere0007_4770 [Bacillus cereus AH621]
Length = 955
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 128/231 (55%), Gaps = 4/231 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ + I + L +L+ LDLS N I I+ + L NL+ L
Sbjct: 222 INEIAGLEYMTNLEKLTLRESNVADISVISGLRHLKYLDLSSNPIESIQPVSKLENLDML 281
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKI+ + + +KK+K+L+L N I+ + +L + +LEE+YL N+IS + + L
Sbjct: 282 FLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTSLFTVLSLEEVYLANNQISNLSGIEKL 341
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ +L + N++ +E + ++NL +L ++++ + I L L+ L++ N IS I
Sbjct: 342 KNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISPLSKLVTLQVLNLEENYISDI 401
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPVAQD 297
+++LT L E + N++ D V L + Q Q I+LD V ++
Sbjct: 402 SPLSNLTNLHEMNLGANEIVDVRPVEELGKRISIDIQRQKIFLDEASVDEE 452
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+LK + +
Sbjct: 552 EDLLQIKTLEILKEKGKEIKDLTGLEYMTNLENLTLEGVGLKNIEFISNLKQLKDVNVSH 611
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
NKI I L L NL+ L L N I + L S+ L L L N +R + L
Sbjct: 612 NKIEDITPLSSLENLQWLNLADNHIKDVSVLGSMLDLLSLKLAGNEIRDVRPL 664
>gi|383852712|ref|XP_003701869.1| PREDICTED: leucine-rich repeat-containing protein 49-like
[Megachile rotundata]
Length = 985
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 116/221 (52%), Gaps = 22/221 (9%)
Query: 20 LNVEAVENTHGNQMSLDNPDEESEAETTESKAEDEESKE-VCIER--------------- 63
N+E + N ++L E T + AE E++ + +C++R
Sbjct: 94 FNIEHDKVEGSNTVTLQWSSEGKNIVATRTAAEKEKNPDRICLDRRGLTTFPNIVGEPRL 153
Query: 64 --LLLRWNLIKKIEN--IHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
L L+ NL+ KIEN LT L L+LYDNQ+ I N + L NL +L + NRI++I+
Sbjct: 154 RLLSLQHNLLTKIENSNFSKLTKLVFLDLYDNQIERICNFELLENLRVLLIGKNRIKKIE 213
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIE--NLDGLTNLEELYLG 177
GL L+ LE L L N+I +I ++++L LKVL L N I++I + GLT L+EL L
Sbjct: 214 GLKSLSKLEVLDLHGNQIVQISDLNNLVSLKVLNLAGNNIKVIGYNDFQGLTALKELNLR 273
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL 218
+NKI R+ +L L L N + IE++ +L QL
Sbjct: 274 RNKIKRLLAFDETPQLQKLYLSNNDIHKIEDIGSLAKALQL 314
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 10/192 (5%)
Query: 119 KGLDHLAN------LEKLYLCSNKISKIEN--VDHLKKLKVLELGDNKIRIIENLDGLTN 170
+GL N L L L N ++KIEN L KL L+L DN+I I N + L N
Sbjct: 139 RGLTTFPNIVGEPRLRLLSLQHNLLTKIENSNFSKLTKLVFLDLYDNQIERICNFELLEN 198
Query: 171 LEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIE- 229
L L +GKN+I +I+ L SL+KL +L L N++ I +L L +L L L+ N + I
Sbjct: 199 LRVLLIGKNRIKKIEGLKSLSKLEVLDLHGNQIVQISDLNNLVSLKVLNLAGNNIKVIGY 258
Query: 230 -NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIY 288
+ L+ L++ NKI + +LQ+ ++++N + + L QL+ I
Sbjct: 259 NDFQGLTALKELNLRRNKIKRLLAFDETPQLQKLYLSNNDIHKIEDIGSLAKALQLREIT 318
Query: 289 LDRNPVAQDPNY 300
+D NPV +Y
Sbjct: 319 IDGNPVTLTGDY 330
>gi|156356312|ref|XP_001623870.1| predicted protein [Nematostella vectensis]
gi|156210608|gb|EDO31770.1| predicted protein [Nematostella vectensis]
Length = 480
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 19/200 (9%)
Query: 38 PDEESEAETTESKAEDEESKEVC------------------IERLLLRWNLIKKIENIHM 79
P S ++ K +D+ +++C I L + ++ +I + +
Sbjct: 24 PAASSHKKSPCPKGKDDHVRDLCTANGINYEKLKKGQSSKKIHTLEMFFSGFPRISGMEL 83
Query: 80 LTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISK 139
L+ L L ++ V++NLD L +L L +S + ++E+ G+D NL+K+Y N ISK
Sbjct: 84 FPGLQVLTLIGQEIEVLQNLDCLPHLTELCVSESSLKELSGIDKCTNLKKVYFYDNHISK 143
Query: 140 IENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRI-DNLASLTKLNILSL 198
IEN+ L +L VL L +N I+ IE L+ L L +L L NKI+ I D L T L +L L
Sbjct: 144 IENLSSLTRLTVLWLNNNNIQAIEGLESLAQLTDLNLASNKITSIGDTLQRNTHLEVLDL 203
Query: 199 QCNRLRTIENLEALTNLTQL 218
NR+ + ++L L +L L
Sbjct: 204 SANRIGSFKDLTNLVHLPHL 223
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 102/180 (56%), Gaps = 5/180 (2%)
Query: 105 LEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIEN 164
+ L++ F+ I G++ L+ L L +I ++N+D L L L + ++ ++ +
Sbjct: 65 IHTLEMFFSGFPRISGMELFPGLQVLTLIGQEIEVLQNLDCLPHLTELCVSESSLKELSG 124
Query: 165 LDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENG 224
+D TNL+++Y N IS+I+NL+SLT+L +L L N ++ IE LE+L LT L L+ N
Sbjct: 125 IDKCTNLKKVYFYDNHISKIENLSSLTRLTVLWLNNNNIQAIEGLESLAQLTDLNLASNK 184
Query: 225 LTTIENLLS-NEKLETLDVAYNKISIIQ---NIAHLTELQEFWINDNQVSDWNTVNVLEN 280
+T+I + L N LE LD++ N+I + N+ HL L+ + D N V++L N
Sbjct: 185 ITSIGDTLQRNTHLEVLDLSANRIGSFKDLTNLVHLPHLKSLSLKDPTYGP-NPVSLLCN 243
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 147 KKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTI 206
KK+ LE+ + I ++ L+ L L +I + NL L L L + + L+ +
Sbjct: 63 KKIHTLEMFFSGFPRISGMELFPGLQVLTLIGQEIEVLQNLDCLPHLTELCVSESSLKEL 122
Query: 207 ENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWIND 266
++ TNL ++Y +N ++ IENL S +L L + N I I+ + L +L + +
Sbjct: 123 SGIDKCTNLKKVYFYDNHISKIENLSSLTRLTVLWLNNNNIQAIEGLESLAQLTDLNLAS 182
Query: 267 NQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
N+++ + L+ N L+ + L N +
Sbjct: 183 NKITSIG--DTLQRNTHLEVLDLSANRIG 209
>gi|83629835|gb|ABC26579.1| internalin D [Listeria monocytogenes]
gi|83629841|gb|ABC26582.1| internalin D [Listeria monocytogenes]
gi|83629845|gb|ABC26584.1| internalin D [Listeria monocytogenes]
gi|83629873|gb|ABC26598.1| internalin D [Listeria monocytogenes]
Length = 566
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 23/239 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +E + L L L L +N++T + L L L IL+ S N++ +I L ++ NL +L
Sbjct: 85 IASLEGVQYLNNLDTLVLNNNKITDLNPLAGLTKLNILEASNNQLSDINALSNVTNLHQL 144
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+I ++ V +L L+ +EL +N+I I + GL NL L + NKIS + ++ L
Sbjct: 145 RLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGL 204
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+KLN L+ N+ I +L L+NL +E + + N+IS +
Sbjct: 205 SKLNHLTADSNQ---ISDLRPLSNL-------------------AAMEVMRLDGNQISDV 242
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
IA+L L ++ +NQ+SD +++ L N+ I LD + +P ++ +LV P
Sbjct: 243 TPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 300
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 96/171 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L+L N I + + LT L LE +NQL+ I L + NL L L N+I+++ G
Sbjct: 97 LDTLVLNNNKITDLNPLAGLTKLNILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNG 156
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ +L NLE + L +N+I+ I V LK L L + +NKI + + GL+ L L N+
Sbjct: 157 VSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQ 216
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
IS + L++L + ++ L N++ + + L NL ++L+EN ++ I +L
Sbjct: 217 ISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSL 267
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI ++LAN K L + + L ++ + + I +E + L NL+ L
Sbjct: 41 INEIFTDENLANAIKTTLSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYLNNLDTL 100
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIENL 231
L NKI+ ++ LA LTKLNIL N+L I L +TNL QL L N L + NL
Sbjct: 101 VLNNNKITDLNPLAGLTKLNILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNGVSNL 160
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 161 IN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 205
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINL--------EILDLS- 111
+ +L L N IK++ + L L+ +EL +NQ+T I + L NL +I DLS
Sbjct: 141 LHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSP 200
Query: 112 -------------FNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
N+I +++ L +LA +E + L N+IS + + +L L + L +N+
Sbjct: 201 ISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQ 260
Query: 159 IRIIENLDGLTNLEELY 175
I I +L L N +
Sbjct: 261 ISDISSLQPLFNSPNFF 277
>gi|83629885|gb|ABC26604.1| internalin D [Listeria monocytogenes]
gi|83629891|gb|ABC26607.1| internalin D [Listeria monocytogenes]
Length = 566
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 23/239 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +E + L L L L +N++T + L L L IL+ S N++ +I L ++ NL +L
Sbjct: 85 IASLEGVQYLNNLDTLVLNNNKITDLNPLAGLTKLNILEASNNQLSDINALSNVTNLHQL 144
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+I ++ V +L L+ +EL +N+I I + GL NL L + NKIS + ++ L
Sbjct: 145 RLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGL 204
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+KLN L+ N+ I +L L+NL +E + + N+IS +
Sbjct: 205 SKLNHLTADSNQ---ISDLRPLSNL-------------------AAMEVMRLDGNQISDV 242
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
IA+L L ++ +NQ+SD +++ L N+ I LD + +P ++ +LV P
Sbjct: 243 TPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 300
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 96/171 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L+L N I + + LT L LE +NQL+ I L + NL L L N+I+++ G
Sbjct: 97 LDTLVLNNNKITDLNPLAGLTKLNILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNG 156
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ +L NLE + L +N+I+ I V LK L L + +NKI + + GL+ L L N+
Sbjct: 157 VSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQ 216
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
IS + L++L + ++ L N++ + + L NL ++L+EN ++ I +L
Sbjct: 217 ISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSL 267
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI ++LAN K L + + L ++ + + I +E + L NL+ L
Sbjct: 41 INEIFTDENLANAIKTTLSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYLNNLDTL 100
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIENL 231
L NKI+ ++ LA LTKLNIL N+L I L +TNL QL L N L + NL
Sbjct: 101 VLNNNKITDLNPLAGLTKLNILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNGVSNL 160
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 161 IN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 205
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINL--------EILDLS- 111
+ +L L N IK++ + L L+ +EL +NQ+T I + L NL +I DLS
Sbjct: 141 LHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSP 200
Query: 112 -------------FNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
N+I +++ L +LA +E + L N+IS + + +L L + L +N+
Sbjct: 201 ISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQ 260
Query: 159 IRIIENLDGLTNLEELY 175
I I +L L N +
Sbjct: 261 ISDISSLQPLFNSPNFF 277
>gi|255522174|ref|ZP_05389411.1| internalin E [Listeria monocytogenes FSL J1-175]
Length = 499
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 75 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVS 134
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L +L+ L+L I+ + ++ L L+ L L N+I I L L+NL+ L LG
Sbjct: 135 ALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYT 194
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + +A+L+KL IL+ + ++ I L +L++LT++YL EN ++ + L
Sbjct: 195 QVSDLTPIANLSKLTILNAENCKVSDISTLASLSSLTEVYLRENQISDVSPL 246
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 10/202 (4%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + L GL +L+ L
Sbjct: 86 ITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLKML 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL---YLSENGLTTIENL 231
+L I+ + +LA LT L L+L N++ I L AL+NL L Y + LT I NL
Sbjct: 146 HLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLTPIANL 205
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
KL L+ K+S I +A L+ L E ++ +NQ+SD V+ L N L I L
Sbjct: 206 ---SKLTILNAENCKVSDISTLASLSSLTEVYLRENQISD---VSPLANIPNLSIIELTD 259
Query: 292 NPVAQDPNYRRKIKLVCPWIVQ 313
+ P Y + K++ P +++
Sbjct: 260 QIITNQPVYYQN-KIIVPNVIK 280
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + + L +LK L L +T + +L L NL+ L+L N+I +I
Sbjct: 120 ITELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISP 179
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+NL+ L L ++S + + +L KL +L + K+ I L L++L E+YL +N+
Sbjct: 180 LAALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISTLASLSSLTEVYLRENQ 239
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 240 ISDVSPLANIPNLSIIEL 257
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFN------ 113
++ L L + I + ++ LT L+EL L NQ+T I L L NL+ L L +
Sbjct: 141 SLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLT 200
Query: 114 ----------------RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
++ +I L L++L ++YL N+IS + + ++ L ++EL D
Sbjct: 201 PIANLSKLTILNAENCKVSDISTLASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQ 260
Query: 158 KI 159
I
Sbjct: 261 II 262
>gi|433448864|ref|ZP_20411729.1| Internalin A [Weissella ceti NC36]
gi|429539253|gb|ELA07290.1| Internalin A [Weissella ceti NC36]
Length = 1042
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 134/249 (53%), Gaps = 12/249 (4%)
Query: 72 KKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLY 131
+K+ I LTTL+ LE+ +N+LT + +L L NL L ++ N++ ++ G+ ++ L L
Sbjct: 153 QKMAAISHLTTLETLEMQNNKLTQLPDLSQLTNLRFLGVAGNKLTDVSGVKNMVRLTGLE 212
Query: 132 LCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKIS--RIDNLAS 189
+ SN+I+ E + HL L+ L +G+N+ I +L LT L++ + +S ++ A
Sbjct: 213 VNSNQITDFEPISHLTNLERLHVGNNRSSDISSLKTLTKLKKGNFSQMGLSNEQMTVFAG 272
Query: 190 LTKLNILSLQCN-RLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
+ + L++ N ++ + +L LTNLT L S++G+T++ L L+TL + NK+S
Sbjct: 273 MKDMESLAIDFNDQISDLSSLSQLTNLTTLDFSKDGVTSLAPLAGLTNLQTLGFSNNKVS 332
Query: 249 IIQNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPVAQDPNYRRKI 304
I + ++ L + NQ+ D + + L N + Q++ L V N ++ I
Sbjct: 333 DISVLKNMPNLSSLTMLRNQIFDLSPLQNLSQLTWVNAKYQSVTLPAMAV----NEQKGI 388
Query: 305 KLVCPWIVQ 313
LV P +V+
Sbjct: 389 DLV-PIVVK 396
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 101/183 (55%), Gaps = 6/183 (3%)
Query: 102 LINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRI 161
L+ +E L+L+++ + ++ GL+ NL+ L L N IS +E + + L L L NK +
Sbjct: 67 LLKIESLNLTYSGVTDLSGLEEAKNLKWLDLTGNAISSLEPLGQVHNLSFLSLRFNKTKD 126
Query: 162 IENLDGL--TNLEELYLGKNKIS----RIDNLASLTKLNILSLQCNRLRTIENLEALTNL 215
I +L L T ++EL L N ++ ++ LT L L +Q N+L + +L LTNL
Sbjct: 127 IPDLAPLKTTAIKELNLVGNDYGLEPQKMAAISHLTTLETLEMQNNKLTQLPDLSQLTNL 186
Query: 216 TQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTV 275
L ++ N LT + + + +L L+V N+I+ + I+HLT L+ + +N+ SD +++
Sbjct: 187 RFLGVAGNKLTDVSGVKNMVRLTGLEVNSNQITDFEPISHLTNLERLHVGNNRSSDISSL 246
Query: 276 NVL 278
L
Sbjct: 247 KTL 249
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 116/216 (53%), Gaps = 17/216 (7%)
Query: 59 VCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREI 118
+E L ++ N + ++ ++ LT L+ L + N+LT + + ++ L L+++ N+I +
Sbjct: 162 TTLETLEMQNNKLTQLPDLSQLTNLRFLGVAGNKLTDVSGVKNMVRLTGLEVNSNQITDF 221
Query: 119 KGLDHLANLEKLYLCSNKISKIENVDHLKKLKV-----LELGDNKIRIIENLDGLTNLEE 173
+ + HL NLE+L++ +N+ S I ++ L KLK + L + ++ + G+ ++E
Sbjct: 222 EPISHLTNLERLHVGNNRSSDISSLKTLTKLKKGNFSQMGLSNEQMTVFA---GMKDMES 278
Query: 174 LYLGKN-KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLL 232
L + N +IS + +L+ LT L L + + ++ L LTNL L S N ++ I L
Sbjct: 279 LAIDFNDQISDLSSLSQLTNLTTLDFSKDGVTSLAPLAGLTNLQTLGFSNNKVSDISVLK 338
Query: 233 SNEKLETLDVAYNKI---SIIQNIAHLTELQEFWIN 265
+ L +L + N+I S +QN++ LT W+N
Sbjct: 339 NMPNLSSLTMLRNQIFDLSPLQNLSQLT-----WVN 369
>gi|423596688|ref|ZP_17572714.1| hypothetical protein IIG_05551, partial [Bacillus cereus VD048]
gi|401219043|gb|EJR25710.1| hypothetical protein IIG_05551, partial [Bacillus cereus VD048]
Length = 785
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 128/231 (55%), Gaps = 4/231 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ + I + L +L+ LDLS N I I+ + L NL+ L
Sbjct: 233 INEIAGLEYMTNLEKLTLRESNVADISVISGLRHLKYLDLSSNPIESIQPVSKLENLDML 292
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKI+ + + +KK+K+L+L N I+ + +L + +LEE+YL N+IS + + L
Sbjct: 293 FLRDNKIADLTPLSQMKKIKILDLIGNNIKDLTSLFTVLSLEEVYLANNQISNLSGIEKL 352
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ +L + N++ +E + ++NL +L ++++ + I L L+ L++ N IS I
Sbjct: 353 KNVKLLWIGNNKISDVEPISKMSNLIELEIADSEIKDISPLSKLVTLQVLNLEENYISDI 412
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPVAQD 297
+++LT L E + N++ D V L + Q Q I+LD V ++
Sbjct: 413 SPLSNLTNLHEMNLGANEIVDVRPVEELGKRISIDIQRQKIFLDEASVDEE 463
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 59/113 (52%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL I+++ GL+++ NLE L L + IE + +LK+LK + +
Sbjct: 563 EDLLQIKTLEILKEKGKEIKDLTGLEYMTNLENLTLEGVGLKNIEFISNLKQLKDVNVSH 622
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
NKI I L L NL+ L L N I + L S+ L L L N +R + L
Sbjct: 623 NKIEDITPLSSLENLQWLNLADNHIKDVSVLGSMLDLLSLKLAGNEIRDVRPL 675
>gi|226222899|ref|YP_002757006.1| internalin E [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|254853463|ref|ZP_05242811.1| internalin E [Listeria monocytogenes FSL R2-503]
gi|300764605|ref|ZP_07074597.1| internalin E [Listeria monocytogenes FSL N1-017]
gi|386731036|ref|YP_006204532.1| internalin E [Listeria monocytogenes 07PF0776]
gi|404279820|ref|YP_006680718.1| internalin E [Listeria monocytogenes SLCC2755]
gi|404285637|ref|YP_006692223.1| internalin E [Listeria monocytogenes serotype 7 str. SLCC2482]
gi|406703044|ref|YP_006753398.1| internalin E (LPXTG motif) [Listeria monocytogenes L312]
gi|225875361|emb|CAS04058.1| internalin E [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|258606834|gb|EEW19442.1| internalin E [Listeria monocytogenes FSL R2-503]
gi|300514712|gb|EFK41767.1| internalin E [Listeria monocytogenes FSL N1-017]
gi|384389794|gb|AFH78864.1| internalin E [Listeria monocytogenes 07PF0776]
gi|404226455|emb|CBY47860.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC2755]
gi|404244566|emb|CBY02791.1| internalin E (LPXTG motif) [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406360074|emb|CBY66347.1| internalin E (LPXTG motif) [Listeria monocytogenes L312]
Length = 499
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 75 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVS 134
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L +L+ L+L I+ + ++ L L+ L L N+I I L L+NL+ L LG
Sbjct: 135 ALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYT 194
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + +A+L+KL IL+ + ++ I L +L++LT++YL EN ++ + L
Sbjct: 195 QVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPL 246
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 10/202 (4%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + L GL +L+ L
Sbjct: 86 ITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLKML 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL---YLSENGLTTIENL 231
+L I+ + +LA LT L L+L N++ I L AL+NL L Y + LT I NL
Sbjct: 146 HLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLTPIANL 205
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
KL L+ K+S I +A L+ L E ++ +NQ+SD V+ L N L I L
Sbjct: 206 ---SKLTILNAENCKVSDISPLASLSSLTEVYLRENQISD---VSPLANIPNLSIIELTD 259
Query: 292 NPVAQDPNYRRKIKLVCPWIVQ 313
+ P Y + K++ P +++
Sbjct: 260 QIITNQPVYYQN-KIIVPNVIK 280
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + + L +LK L L +T + +L L NL+ L+L N+I +I
Sbjct: 120 ITELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISP 179
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+NL+ L L ++S + + +L KL +L + K+ I L L++L E+YL +N+
Sbjct: 180 LAALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQ 239
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 240 ISDVSPLANIPNLSIIEL 257
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFN------ 113
++ L L + I + ++ LT L+EL L NQ+T I L L NL+ L L +
Sbjct: 141 SLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLT 200
Query: 114 ----------------RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
++ +I L L++L ++YL N+IS + + ++ L ++EL D
Sbjct: 201 PIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQ 260
Query: 158 KI 159
I
Sbjct: 261 II 262
>gi|254932490|ref|ZP_05265849.1| internalin E [Listeria monocytogenes HPB2262]
gi|405748615|ref|YP_006672081.1| internalin E [Listeria monocytogenes ATCC 19117]
gi|417316569|ref|ZP_12103213.1| internalin E [Listeria monocytogenes J1-220]
gi|424822001|ref|ZP_18247014.1| Internalin E [Listeria monocytogenes str. Scott A]
gi|293584046|gb|EFF96078.1| internalin E [Listeria monocytogenes HPB2262]
gi|328476104|gb|EGF46813.1| internalin E [Listeria monocytogenes J1-220]
gi|332310681|gb|EGJ23776.1| Internalin E [Listeria monocytogenes str. Scott A]
gi|404217815|emb|CBY69179.1| internalin E (LPXTG motif) [Listeria monocytogenes ATCC 19117]
Length = 499
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 75 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVS 134
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L +L+ L+L I+ + ++ L L+ L L N+I I L L+NL+ L LG
Sbjct: 135 ALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYT 194
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + +A+L+KL IL+ + ++ I L +L++LT++YL EN ++ + L
Sbjct: 195 QVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPL 246
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 10/202 (4%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + L GL +L+ L
Sbjct: 86 ITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLKML 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL---YLSENGLTTIENL 231
+L I+ + +LA LT L L+L N++ I L AL+NL L Y + LT I NL
Sbjct: 146 HLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLTPIANL 205
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
KL L+ K+S I +A L+ L E ++ +NQ+SD V+ L N L I L
Sbjct: 206 ---SKLTILNAENCKVSDISPLASLSSLTEVYLRENQISD---VSPLANIPNLSIIELTD 259
Query: 292 NPVAQDPNYRRKIKLVCPWIVQ 313
+ P Y + K++ P +++
Sbjct: 260 QIITNQPVYYQN-KIIVPNVIK 280
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + + L +LK L L +T + +L L NL+ L+L N+I +I
Sbjct: 120 ITELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISP 179
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+NL+ L L ++S + + +L KL +L + K+ I L L++L E+YL +N+
Sbjct: 180 LAALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQ 239
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 240 ISDVSPLANIPNLSIIEL 257
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFN------ 113
++ L L + I + ++ LT L+EL L NQ+T I L L NL+ L L +
Sbjct: 141 SLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLT 200
Query: 114 ----------------RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
++ +I L L++L ++YL N+IS + + ++ L ++EL D
Sbjct: 201 PIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQ 260
Query: 158 KI 159
I
Sbjct: 261 II 262
>gi|83629875|gb|ABC26599.1| internalin D [Listeria monocytogenes]
gi|83629877|gb|ABC26600.1| internalin D [Listeria monocytogenes]
Length = 567
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 23/239 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +E L L L L +N++T + L L L IL+ S N++ +I L ++ NL +L
Sbjct: 86 IASLEGTQYLNNLDTLVLNNNKITTLNPLAGLTKLSILEASNNQLSDISVLSNVTNLHQL 145
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+I ++ V +L L+ +EL +N+I I + GL NL L + NKIS + ++ L
Sbjct: 146 RLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGL 205
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+KLN L+ N+ I +L L+NL +E + + N+IS +
Sbjct: 206 SKLNHLTADSNQ---ISDLRPLSNL-------------------AAMEVMRLDGNQISDV 243
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
IA+L L ++ +NQ+SD +++ L N+ I LD + +P ++ +LV P
Sbjct: 244 TPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 301
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 32 QMSLDNPDEESEAETTE----SKAEDEESKEVCIER---------LLLRWNLIKKIENIH 78
+ +L+ P+ S+ TE S+ E S +E L+L N I + +
Sbjct: 56 KATLNKPNTTSDVSQTELDSISEVTAESSNIASLEGTQYLNNLDTLVLNNNKITTLNPLA 115
Query: 79 MLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKIS 138
LT L LE +NQL+ I L + NL L L N+I+++ G+ +L NLE + L +N+I+
Sbjct: 116 GLTKLSILEASNNQLSDISVLSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQIT 175
Query: 139 KIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSL 198
I V LK L L + +NKI + + GL+ L L N+IS + L++L + ++ L
Sbjct: 176 AISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRL 235
Query: 199 QCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
N++ + + L NL ++L+EN ++ I +L
Sbjct: 236 DGNQISDVTPIANLANLNYVFLAENQISDISSL 268
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 10/170 (5%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDH--LKKLKVLELGDNKIRIIENLDGLTNLE 172
I EI ++LAN K L NK + +V L + + + I +E L NL+
Sbjct: 42 INEIFTDENLANAIKATL--NKPNTTSDVSQTELDSISEVTAESSNIASLEGTQYLNNLD 99
Query: 173 ELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIE 229
L L NKI+ ++ LA LTKL+IL N+L I L +TNL QL L N L +
Sbjct: 100 TLVLNNNKITTLNPLAGLTKLSILEASNNQLSDISVLSNVTNLHQLRLDGNQIKQLNGVS 159
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
NL++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 160 NLIN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 206
>gi|405754355|ref|YP_006677819.1| internalin E [Listeria monocytogenes SLCC2540]
gi|404223555|emb|CBY74917.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC2540]
Length = 499
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 75 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVS 134
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L +L+ L+L I+ + ++ L L+ L L N+I I L L+NL+ L LG
Sbjct: 135 ALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYT 194
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + +A+L+KL IL+ + ++ I L +L++LT++YL EN ++ + L
Sbjct: 195 QVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPL 246
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 10/202 (4%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + L GL +L+ L
Sbjct: 86 ITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLKML 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL---YLSENGLTTIENL 231
+L I+ + +LA LT L L+L N++ I L AL+NL L Y + LT I NL
Sbjct: 146 HLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLTPIANL 205
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
KL L+ K+S I +A L+ L E ++ +NQ+SD V+ L N L I L
Sbjct: 206 ---SKLTILNAENCKVSDISPLASLSSLTEVYLRENQISD---VSPLANIPNLSIIELTD 259
Query: 292 NPVAQDPNYRRKIKLVCPWIVQ 313
+ P Y + K++ P +++
Sbjct: 260 QIITNQPVYYQD-KIIVPNVIK 280
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + + L +LK L L +T + +L L NL+ L+L N+I +I
Sbjct: 120 ITELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISP 179
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+NL+ L L ++S + + +L KL +L + K+ I L L++L E+YL +N+
Sbjct: 180 LAALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQ 239
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 240 ISDVSPLANIPNLSIIEL 257
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFN------ 113
++ L L + I + ++ LT L+EL L NQ+T I L L NL+ L L +
Sbjct: 141 SLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLT 200
Query: 114 ----------------RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
++ +I L L++L ++YL N+IS + + ++ L ++EL D
Sbjct: 201 PIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQ 260
Query: 158 KI 159
I
Sbjct: 261 II 262
>gi|83629901|gb|ABC26612.1| internalin E [Listeria monocytogenes]
gi|83629911|gb|ABC26617.1| internalin E [Listeria monocytogenes]
gi|83629913|gb|ABC26618.1| internalin E [Listeria monocytogenes]
gi|83629921|gb|ABC26622.1| internalin E [Listeria monocytogenes]
gi|83629929|gb|ABC26626.1| internalin E [Listeria monocytogenes]
gi|83629939|gb|ABC26631.1| internalin E [Listeria monocytogenes]
gi|83629961|gb|ABC26642.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 74 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVS 133
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L +L+ L+L I+ + ++ L L+ L L N+I I L L+NL+ L LG
Sbjct: 134 ALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYT 193
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + +A+L+KL IL+ + ++ I L +L++LT++YL EN ++ + L
Sbjct: 194 QVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPL 245
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 10/202 (4%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + L GL +L+ L
Sbjct: 85 ITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLKML 144
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL---YLSENGLTTIENL 231
+L I+ + +LA LT L L+L N++ I L AL+NL L Y + LT I NL
Sbjct: 145 HLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLTPIANL 204
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
KL L+ K+S I +A L+ L E ++ +NQ+SD V+ L N L I L
Sbjct: 205 ---SKLTILNAENCKVSDISPLASLSSLTEVYLRENQISD---VSPLANIPNLSIIELTD 258
Query: 292 NPVAQDPNYRRKIKLVCPWIVQ 313
+ P Y + K++ P +++
Sbjct: 259 QIITNQPVYYQN-KIIVPNVIK 279
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + + L +LK L L +T + +L L NL+ L+L N+I +I
Sbjct: 119 ITELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISP 178
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+NL+ L L ++S + + +L KL +L + K+ I L L++L E+YL +N+
Sbjct: 179 LAALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQ 238
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 239 ISDVSPLANIPNLSIIEL 256
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFN------ 113
++ L L + I + ++ LT L+EL L NQ+T I L L NL+ L L +
Sbjct: 140 SLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLT 199
Query: 114 ----------------RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
++ +I L L++L ++YL N+IS + + ++ L ++EL D
Sbjct: 200 PIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQ 259
Query: 158 KI 159
I
Sbjct: 260 II 261
>gi|224131776|ref|XP_002328105.1| predicted protein [Populus trichocarpa]
gi|222837620|gb|EEE75985.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 125/231 (54%), Gaps = 3/231 (1%)
Query: 82 TLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIE 141
T+ + L L+ I L NLE LDL+FN + ++GL L+ L + NK+ ++
Sbjct: 20 TITSISLTHRNLSDISCLSEFQNLERLDLAFNNLTSLQGLSSCVKLKWLSVVQNKLESLK 79
Query: 142 NVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCN 201
++ L L VL G NKI+ I+ + L +L L L N+I I L + +LN L L N
Sbjct: 80 GIESLSNLTVLNAGKNKIKSIDEVRSLVSLRALILNDNEIVSICKLDQMKELNTLVLSRN 139
Query: 202 RLRTI-ENLEALTNLTQLYLSENGLTTI-ENLLSNEKLETLDVAYNKI-SIIQNIAHLTE 258
+R I E+L + ++T+L LS L TI +L S +L+ L +A+N I ++ +A+ +
Sbjct: 140 PIREIGESLFKVKSMTKLSLSNCHLQTIGSSLKSCIELKELRLAHNDIKTLPAELAYNKK 199
Query: 259 LQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
LQ + +N ++ W+ V VL + L+ + L NP+A++ +K++ P
Sbjct: 200 LQNLDLGNNLITRWSDVKVLSSLVDLKNLNLLGNPIAENAKITKKVQKFLP 250
>gi|254828723|ref|ZP_05233410.1| internalin D [Listeria monocytogenes FSL N3-165]
gi|258601128|gb|EEW14453.1| internalin D [Listeria monocytogenes FSL N3-165]
Length = 568
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 121/239 (50%), Gaps = 23/239 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +E L L L L +N++T + L L L IL+ S N++ +I L ++ NL +L
Sbjct: 87 IASLEGTQYLNNLDTLVLNNNKITTLNPLAGLTKLSILEASNNQLSDISVLSNVTNLHQL 146
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+I ++ V +L L+ +EL +N+I I + GL NL L + NKIS + ++ L
Sbjct: 147 RLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGL 206
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+KLN L+ N+ I +L L+NL +E + + N+IS +
Sbjct: 207 SKLNHLTADSNQ---ISDLRPLSNL-------------------AAMEVMRLDGNQISDV 244
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
IA+L L ++ +NQ+SD +++ L N+ I LD + +P ++ +LV P
Sbjct: 245 TPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 302
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 110/213 (51%), Gaps = 13/213 (6%)
Query: 32 QMSLDNPDEESEAETTE----SKAEDEESKEVCIER---------LLLRWNLIKKIENIH 78
+ +L+ P+ S+ TE S+ E S +E L+L N I + +
Sbjct: 57 KATLNKPNTTSDVSQTELDSISEVTAESSNIASLEGTQYLNNLDTLVLNNNKITTLNPLA 116
Query: 79 MLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKIS 138
LT L LE +NQL+ I L + NL L L N+I+++ G+ +L NLE + L +N+I+
Sbjct: 117 GLTKLSILEASNNQLSDISVLSNVTNLHQLRLDGNQIKQLNGVSNLINLETIELSNNQIT 176
Query: 139 KIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSL 198
I V LK L L + +NKI + + GL+ L L N+IS + L++L + ++ L
Sbjct: 177 AISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRL 236
Query: 199 QCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
N++ + + L NL ++L+EN ++ I +L
Sbjct: 237 DGNQISDVTPIANLANLNYVFLAENQISDISSL 269
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 10/170 (5%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDH--LKKLKVLELGDNKIRIIENLDGLTNLE 172
I EI ++LAN K L NK + +V L + + + I +E L NL+
Sbjct: 43 INEIFTDENLANAIKATL--NKPNTTSDVSQTELDSISEVTAESSNIASLEGTQYLNNLD 100
Query: 173 ELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIE 229
L L NKI+ ++ LA LTKL+IL N+L I L +TNL QL L N L +
Sbjct: 101 TLVLNNNKITTLNPLAGLTKLSILEASNNQLSDISVLSNVTNLHQLRLDGNQIKQLNGVS 160
Query: 230 NLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
NL++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 161 NLIN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 207
>gi|83629897|gb|ABC26610.1| internalin E [Listeria monocytogenes]
gi|83629903|gb|ABC26613.1| internalin E [Listeria monocytogenes]
gi|83629933|gb|ABC26628.1| internalin E [Listeria monocytogenes]
gi|83629935|gb|ABC26629.1| internalin E [Listeria monocytogenes]
gi|83629937|gb|ABC26630.1| internalin E [Listeria monocytogenes]
gi|83629943|gb|ABC26633.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 74 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVS 133
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L +L+ L+L I+ + ++ L L+ L L N+I I L L+NL+ L LG
Sbjct: 134 ALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYT 193
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + +A+L+KL IL+ + ++ I L +L++LT++YL EN ++ + L
Sbjct: 194 QVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPL 245
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 10/202 (4%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + L GL +L+ L
Sbjct: 85 ITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLKML 144
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL---YLSENGLTTIENL 231
+L I+ + +LA LT L L+L N++ I L AL+NL L Y + LT I NL
Sbjct: 145 HLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLTPIANL 204
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
KL L+ K+S I +A L+ L E ++ +NQ+SD V+ L N L I L
Sbjct: 205 ---SKLTILNAENCKVSDISPLASLSSLTEVYLRENQISD---VSPLANIPNLSIIELTD 258
Query: 292 NPVAQDPNYRRKIKLVCPWIVQ 313
+ P Y + K++ P +++
Sbjct: 259 QIITNQPVYYQN-KIIVPNVIK 279
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + + L +LK L L +T + +L L NL+ L+L N+I +I
Sbjct: 119 ITELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISP 178
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+NL+ L L ++S + + +L KL +L + K+ I L L++L E+YL +N+
Sbjct: 179 LAALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQ 238
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 239 ISDVSPLANIPNLSIIEL 256
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFN------ 113
++ L L + I + ++ LT L+EL L NQ+T I L L NL+ L L +
Sbjct: 140 SLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLT 199
Query: 114 ----------------RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
++ +I L L++L ++YL N+IS + + ++ L ++EL D
Sbjct: 200 PIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQ 259
Query: 158 KI 159
I
Sbjct: 260 II 261
>gi|83629905|gb|ABC26614.1| internalin E [Listeria monocytogenes]
gi|83629927|gb|ABC26625.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 74 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVS 133
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L +L+ L+L I+ + ++ L L+ L L N+I I L L+NL+ L LG
Sbjct: 134 ALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYT 193
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + +A+L+KL IL+ + ++ I L +L++LT++YL EN ++ + L
Sbjct: 194 QVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPL 245
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 10/202 (4%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + L GL +L+ L
Sbjct: 85 ITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLKML 144
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL---YLSENGLTTIENL 231
+L I+ + +LA LT L L+L N++ I L AL+NL L Y + LT I NL
Sbjct: 145 HLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLTPIANL 204
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
KL L+ K+S I +A L+ L E ++ +NQ+SD V+ L N L I L
Sbjct: 205 ---SKLTILNAENCKVSDISPLASLSSLTEVYLRENQISD---VSPLANIPNLSIIELTD 258
Query: 292 NPVAQDPNYRRKIKLVCPWIVQ 313
+ P Y + K++ P +++
Sbjct: 259 QIITNQPVYYQN-KIIVPNVIK 279
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + + L +LK L L +T + +L L NL+ L+L N+I +I
Sbjct: 119 ITELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISP 178
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+NL+ L L ++S + + +L KL +L + K+ I L L++L E+YL +N+
Sbjct: 179 LAALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQ 238
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 239 ISDVSPLANIPNLSIIEL 256
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFN------ 113
++ L L + I + ++ LT L+EL L NQ+T I L L NL+ L L +
Sbjct: 140 SLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLT 199
Query: 114 ----------------RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
++ +I L L++L ++YL N+IS + + ++ L ++EL D
Sbjct: 200 PIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQ 259
Query: 158 KI 159
I
Sbjct: 260 II 261
>gi|46906504|ref|YP_012893.1| internalin E [Listeria monocytogenes serotype 4b str. F2365]
gi|254825685|ref|ZP_05230686.1| internalin E [Listeria monocytogenes FSL J1-194]
gi|405751488|ref|YP_006674953.1| internalin E [Listeria monocytogenes SLCC2378]
gi|424713136|ref|YP_007013851.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
gi|46879769|gb|AAT03070.1| internalin E [Listeria monocytogenes serotype 4b str. F2365]
gi|293594929|gb|EFG02690.1| internalin E [Listeria monocytogenes FSL J1-194]
gi|404220688|emb|CBY72051.1| internalin E (LPXTG motif) [Listeria monocytogenes SLCC2378]
gi|424012320|emb|CCO62860.1| Internalin-A [Listeria monocytogenes serotype 4b str. LL195]
Length = 499
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 75 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVS 134
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L +L+ L+L I+ + ++ L L+ L L N+I I L L+NL+ L LG
Sbjct: 135 ALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYT 194
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + +A+L+KL IL+ + ++ I L +L++LT++YL EN ++ + L
Sbjct: 195 QVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPL 246
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 10/202 (4%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + L GL +L+ L
Sbjct: 86 ITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLKML 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL---YLSENGLTTIENL 231
+L I+ + +LA LT L L+L N++ I L AL+NL L Y + LT I NL
Sbjct: 146 HLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLTPIANL 205
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
KL L+ K+S I +A L+ L E ++ +NQ+SD V+ L N L I L
Sbjct: 206 ---SKLTILNAENCKVSDISPLASLSSLTEVYLRENQISD---VSPLANIPNLSIIELTD 259
Query: 292 NPVAQDPNYRRKIKLVCPWIVQ 313
+ P Y + K++ P +++
Sbjct: 260 QIITNQPVYYQN-KIIVPNVIK 280
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + + L +LK L L +T + +L L NL+ L+L N+I +I
Sbjct: 120 ITELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISP 179
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+NL+ L L ++S + + +L KL +L + K+ I L L++L E+YL +N+
Sbjct: 180 LAALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQ 239
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 240 ISDVSPLANIPNLSIIEL 257
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFN------ 113
++ L L + I + ++ LT L+EL L NQ+T I L L NL+ L L +
Sbjct: 141 SLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLT 200
Query: 114 ----------------RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
++ +I L L++L ++YL N+IS + + ++ L ++EL D
Sbjct: 201 PIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQ 260
Query: 158 KI 159
I
Sbjct: 261 II 262
>gi|284800561|ref|YP_003412426.1| internalin H [Listeria monocytogenes 08-5578]
gi|284993747|ref|YP_003415515.1| internalin H [Listeria monocytogenes 08-5923]
gi|284056123|gb|ADB67064.1| internalin H [Listeria monocytogenes 08-5578]
gi|284059214|gb|ADB70153.1| internalin H [Listeria monocytogenes 08-5923]
Length = 567
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 122/239 (51%), Gaps = 23/239 (9%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +E + L L L L +N++T + L L L IL+ S N++ +I L ++ NL +L
Sbjct: 86 IASLEGVQYLNNLDTLVLNNNKITDLNPLAGLSKLNILEASNNQLSDINALSNVTNLHQL 145
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
L N+I ++ V +L L+ +EL +N+I I + GL NL L + NKIS + ++ L
Sbjct: 146 RLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGL 205
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+KLN L+ N+ I +L L+NL +E + + N+IS +
Sbjct: 206 SKLNHLTADSNQ---ISDLRPLSNL-------------------AAMEVMRLDGNQISDV 243
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYRRKIKLVCP 309
IA+L L ++ +NQ+SD +++ L N+ I LD + +P ++ +LV P
Sbjct: 244 TPIANLANLNYVFLAENQISDISSLQPLFNSPNFFGITLDNQKITSEPVLYQQ-ELVVP 301
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 96/171 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
++ L+L N I + + L+ L LE +NQL+ I L + NL L L N+I+++ G
Sbjct: 98 LDTLVLNNNKITDLNPLAGLSKLNILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNG 157
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
+ +L NLE + L +N+I+ I V LK L L + +NKI + + GL+ L L N+
Sbjct: 158 VSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLSKLNHLTADSNQ 217
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
IS + L++L + ++ L N++ + + L NL ++L+EN ++ I +L
Sbjct: 218 ISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQISDISSL 268
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I EI ++LAN K L + + L ++ + + I +E + L NL+ L
Sbjct: 42 INEIFTDENLANAIKTTLSKPSTASAVSQVELDSVRDVTAESSNIASLEGVQYLNNLDTL 101
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSEN---GLTTIENL 231
L NKI+ ++ LA L+KLNIL N+L I L +TNL QL L N L + NL
Sbjct: 102 VLNNNKITDLNPLAGLSKLNILEASNNQLSDINALSNVTNLHQLRLDGNQIKQLNGVSNL 161
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLE 279
++ LET++++ N+I+ I ++ L L I++N++SD + ++ L
Sbjct: 162 IN---LETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSPISGLS 206
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 22/137 (16%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINL--------EILDLS- 111
+ +L L N IK++ + L L+ +EL +NQ+T I + L NL +I DLS
Sbjct: 142 LHQLRLDGNQIKQLNGVSNLINLETIELSNNQITAISPVSGLKNLVGLGIDNNKISDLSP 201
Query: 112 -------------FNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNK 158
N+I +++ L +LA +E + L N+IS + + +L L + L +N+
Sbjct: 202 ISGLSKLNHLTADSNQISDLRPLSNLAAMEVMRLDGNQISDVTPIANLANLNYVFLAENQ 261
Query: 159 IRIIENLDGLTNLEELY 175
I I +L L N +
Sbjct: 262 ISDISSLQPLFNSPNFF 278
>gi|410960946|ref|XP_003987048.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
protein 49 [Felis catus]
Length = 642
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 93/152 (61%), Gaps = 1/152 (0%)
Query: 63 RLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGL 121
RLL + N I +I+NI L L L+LYDNQ+ I L TL +L +L L NRI++I L
Sbjct: 115 RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISNL 174
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKI 181
++L +L+ L L N+I++IENV HL L+VL L N + ++NL+GL +L EL L N+I
Sbjct: 175 ENLKSLDVLDLHGNQITRIENVSHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQI 234
Query: 182 SRIDNLASLTKLNILSLQCNRLRTIENLEALT 213
+ + ++ +L L L L N + T + + T
Sbjct: 235 TFVRDVDNLPSLQRLFLSFNNISTTKAFKVPT 266
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 88/145 (60%)
Query: 83 LKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIEN 142
L+ L N +T I+N+ L L LDL N+I EI GL L +L L L N+I KI N
Sbjct: 114 LRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLGKNRIKKISN 173
Query: 143 VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNR 202
+++LK L VL+L N+I IEN+ L +L L L +N +S +DNL L L L+L+ N+
Sbjct: 174 LENLKSLDVLDLHGNQITRIENVSHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQ 233
Query: 203 LRTIENLEALTNLTQLYLSENGLTT 227
+ + +++ L +L +L+LS N ++T
Sbjct: 234 ITFVRDVDNLPSLQRLFLSFNNIST 258
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 104/184 (56%), Gaps = 10/184 (5%)
Query: 118 IKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLG 177
I G +HL L N I++I+N+ +L++L L+L DN+I I L L +L L LG
Sbjct: 108 IDGEEHL---RLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLSTLRSLRVLLLG 164
Query: 178 KNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKL 237
KN+I +I NL +L L++L L N++ IEN+ L +L L L+ N L+ ++NL + L
Sbjct: 165 KNRIKKISNLENLKSLDVLDLHGNQITRIENVSHLCDLRVLNLARNLLSHVDNLNGLDSL 224
Query: 238 ETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQD 297
L++ +N+I+ ++++ +L LQ +++ N +S V T++ +P+A++
Sbjct: 225 TELNLRHNQITFVRDVDNLPSLQRLFLSFNNISTTKAFKV-------PTMWSFTDPIAEE 277
Query: 298 PNYR 301
R
Sbjct: 278 EERR 281
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 96/164 (58%)
Query: 85 ELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVD 144
L L +LTV +D +L +L+ N I I+ + +L L L L N+I +I +
Sbjct: 94 RLTLERQKLTVCPIIDGEEHLRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGLS 153
Query: 145 HLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR 204
L+ L+VL LG N+I+ I NL+ L +L+ L L N+I+RI+N++ L L +L+L N L
Sbjct: 154 TLRSLRVLLLGKNRIKKISNLENLKSLDVLDLHGNQITRIENVSHLCDLRVLNLARNLLS 213
Query: 205 TIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKIS 248
++NL L +LT+L L N +T + ++ + L+ L +++N IS
Sbjct: 214 HVDNLNGLDSLTELNLRHNQITFVRDVDNLPSLQRLFLSFNNIS 257
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 89/174 (51%), Gaps = 3/174 (1%)
Query: 128 EKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNL 187
++L L K++ +D + L++L N I I+N+ L L L L N+I I L
Sbjct: 93 DRLTLERQKLTVCPIIDGEEHLRLLNFQHNFITRIQNISNLQRLIFLDLYDNQIEEISGL 152
Query: 188 ASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKI 247
++L L +L L NR++ I NLE L +L L L N +T IEN+ L L++A N +
Sbjct: 153 STLRSLRVLLLGKNRIKKISNLENLKSLDVLDLHGNQITRIENVSHLCDLRVLNLARNLL 212
Query: 248 SIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVAQDPNYR 301
S + N+ L L E + NQ++ V ++N LQ ++L N ++ ++
Sbjct: 213 SHVDNLNGLDSLTELNLRHNQIT---FVRDVDNLPSLQRLFLSFNNISTTKAFK 263
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 54 EESKEVCIERLL-LRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSF 112
E +C R+L L NL+ ++N++ L +L EL L NQ+T + ++D L +L+ L LSF
Sbjct: 194 ENVSHLCDLRVLNLARNLLSHVDNLNGLDSLTELNLRHNQITFVRDVDNLPSLQRLFLSF 253
Query: 113 NRIREIKGL 121
N I K
Sbjct: 254 NNISTTKAF 262
>gi|83629923|gb|ABC26623.1| internalin E [Listeria monocytogenes]
Length = 498
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 74 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVS 133
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L +L+ L+L I+ + ++ L L+ L L N+I I L L+NL+ L LG
Sbjct: 134 ALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYT 193
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + +A+L+KL IL+ + ++ I L +L++LT++YL EN ++ + L
Sbjct: 194 QVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPL 245
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 10/202 (4%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + L GL +L+ L
Sbjct: 85 ITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLKML 144
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL---YLSENGLTTIENL 231
+L I+ + +LA LT L L+L N++ I L AL+NL L Y + LT I NL
Sbjct: 145 HLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLTPIANL 204
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
KL L+ K+S I +A L+ L E ++ +NQ+SD V+ L N L I L
Sbjct: 205 ---SKLTILNAENCKVSDISPLASLSSLTEVYLRENQISD---VSPLANIPNLSIIELTD 258
Query: 292 NPVAQDPNYRRKIKLVCPWIVQ 313
+ P Y + K++ P +++
Sbjct: 259 QIITNQPVYYQN-KIIVPNVIK 279
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + + L +LK L L +T + +L L NL+ L+L N+I +I
Sbjct: 119 ITELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISP 178
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+NL+ L L ++S + + +L KL +L + K+ I L L++L E+YL +N+
Sbjct: 179 LAALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQ 238
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 239 ISDVSPLANIPNLSIIEL 256
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFN------ 113
++ L L + I + ++ LT L+EL L NQ+T I L L NL+ L L +
Sbjct: 140 SLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLT 199
Query: 114 ----------------RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
++ +I L L++L ++YL N+IS + + ++ L ++EL D
Sbjct: 200 PIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQ 259
Query: 158 KI 159
I
Sbjct: 260 II 261
>gi|335429117|ref|ZP_08556021.1| Rab family protein [Haloplasma contractile SSD-17B]
gi|334890533|gb|EGM28798.1| Rab family protein [Haloplasma contractile SSD-17B]
Length = 1202
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 119/221 (53%), Gaps = 4/221 (1%)
Query: 75 ENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCS 134
EN + L L L NQ+T + L T L LDLS N+I ++ D L L L L
Sbjct: 917 ENFSNMLNLNGLHLSGNQITDVTPLSTAPALIELDLSNNQITDLTNYDLLTYLFSLNLND 976
Query: 135 NKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLN 194
N IS + + +L KL L L +N+I + L GLTNL LY N IS + L +L K+
Sbjct: 977 NSISDLTPLANLTKLSSLRLNNNQISDLTPLGGLTNLTHLYAENNAISDLTPLTNLNKIW 1036
Query: 195 ILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIA 254
L L N++ + L +LT+L+ L ++ N +T + L N +L L + N IS + +A
Sbjct: 1037 YLVLNGNQISDLTALSSLTDLSYLRMNNNQITDLSP-LQNLRLSDLQLNNNLISDLSYLA 1095
Query: 255 HLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+ T + + +N+NQ+SD ++V+ N L+T+ LD N ++
Sbjct: 1096 NSTSISKLLLNNNQISD---ISVISNFTGLRTLELDDNMIS 1133
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 125/237 (52%), Gaps = 4/237 (1%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I+ +E + T L +++L N ++ I L+ L LE ++L+ N ++
Sbjct: 791 SLTSLYAGFYYIRSVEGLQYFTNLTKIDLLYNDISDITPLENLPLLEDINLNNNNFSDLS 850
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L ++ L+ L+L +N I+ + + +L L L L +N++ + L L NL+ +YL N
Sbjct: 851 SLQNIKTLKNLWLENNNITDLSVLANLSNLDSLYLSNNQVSDLTPLINLANLQNVYLSNN 910
Query: 180 KISRI-DNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
+++ + +N +++ LN L L N++ + L L +L LS N +T + N L
Sbjct: 911 QVTTLPENFSNMLNLNGLHLSGNQITDVTPLSTAPALIELDLSNNQITDLTNYDLLTYLF 970
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+L++ N IS + +A+LT+L +N+NQ+SD + L N L +Y + N ++
Sbjct: 971 SLNLNDNSISDLTPLANLTKLSSLRLNNNQISDLTPLGGLTN---LTHLYAENNAIS 1024
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 132/260 (50%), Gaps = 8/260 (3%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
S + L L N I + N +LT L L L DN ++ + L L L L L+ N+I
Sbjct: 942 STAPALIELDLSNNQITDLTNYDLLTYLFSLNLNDNSISDLTPLANLTKLSSLRLNNNQI 1001
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++ L L NL LY +N IS + + +L K+ L L N+I + L LT+L L
Sbjct: 1002 SDLTPLGGLTNLTHLYAENNAISDLTPLTNLNKIWYLVLNGNQISDLTALSSLTDLSYLR 1061
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
+ N+I+ + L +L +L+ L L N + + L T++++L L+ N ++ I + +
Sbjct: 1062 MNNNQITDLSPLQNL-RLSDLQLNNNLISDLSYLANSTSISKLLLNNNQISDISVISNFT 1120
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV- 294
L TL++ N IS + ++ T L+ ++ +N +SD V L + L +YLD N +
Sbjct: 1121 GLRTLELDDNMISDLSALSSQTNLELLYLRNNLISD---VTPLTSLTTLWRLYLDGNNID 1177
Query: 295 AQDPNYRR---KIKLVCPWI 311
QDP+ +IKL P++
Sbjct: 1178 LQDPDTISALDEIKLSSPYV 1197
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+ I +LLL N I I I T L+ LEL DN ++ + L + NLE+L L N I
Sbjct: 1095 ANSTSISKLLLNNNQISDISVISNFTGLRTLELDDNMISDLSALSSQTNLELLYLRNNLI 1154
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRI 161
++ L L L +LYL N I +++ D + L ++L + I
Sbjct: 1155 SDVTPLTSLTTLWRLYLDGNNI-DLQDPDTISALDEIKLSSPYVTI 1199
>gi|402562421|ref|YP_006605145.1| internalin protein [Bacillus thuringiensis HD-771]
gi|401791073|gb|AFQ17112.1| internalin protein [Bacillus thuringiensis HD-771]
Length = 1009
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 126/228 (55%), Gaps = 4/228 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ +DL+ N I I + L N+ L
Sbjct: 230 INEIAGLEYMTNLEKLTLRESNVTDISAISKLRSLKYVDLTSNSIESIHPIGQLENINML 289
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKIS + + +KK+K L+L N I+ I+ L L+ +++LYL N+IS ++ + L
Sbjct: 290 FLRDNKISDLTPLSKMKKIKTLDLIGNNIKDIQPLFTLSTMKQLYLANNQISDLNGIDRL 349
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ +L + N++ +E++ ++NL +L ++++ + I L L+ L++ N IS I
Sbjct: 350 NNVELLWIGNNKINNVESISKMSNLIELEIADSEIKDISPLSQLGNLQVLNLEENYISDI 409
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPV 294
++ LT L E + N++SD V L + Q Q I+L+ V
Sbjct: 410 SPLSTLTNLHEINLGANEISDVRPVEELGKRISIDIQRQKIFLNEASV 457
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 109/192 (56%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK ++ + L N I+ I I L + L L DN+++ + L + ++ LDL N I
Sbjct: 259 SKLRSLKYVDLTSNSIESIHPIGQLENINMLFLRDNKISDLTPLSKMKKIKTLDLIGNNI 318
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++I+ L L+ +++LYL +N+IS + +D L +++L +G+NKI +E++ ++NL EL
Sbjct: 319 KDIQPLFTLSTMKQLYLANNQISDLNGIDRLNNVELLWIGNNKINNVESISKMSNLIELE 378
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
+ ++I I L+ L L +L+L+ N + I L LTNL ++ L N ++ + +
Sbjct: 379 IADSEIKDISPLSQLGNLQVLNLEENYISDISPLSTLTNLHEINLGANEISDVRPVEELG 438
Query: 236 KLETLDVAYNKI 247
K ++D+ KI
Sbjct: 439 KRISIDIQRQKI 450
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 106/196 (54%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E+L LR + + I I L +LK ++L N + I + L N+ +L L N+I ++
Sbjct: 242 LEKLTLRESNVTDISAISKLRSLKYVDLTSNSIESIHPIGQLENINMLFLRDNKISDLTP 301
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L + ++ L L N I I+ + L +K L L +N+I + +D L N+E L++G NK
Sbjct: 302 LSKMKKIKTLDLIGNNIKDIQPLFTLSTMKQLYLANNQISDLNGIDRLNNVELLWIGNNK 361
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ +++++ ++ L L + + ++ I L L NL L L EN ++ I L + L +
Sbjct: 362 INNVESISKMSNLIELEIADSEIKDISPLSQLGNLQVLNLEENYISDISPLSTLTNLHEI 421
Query: 241 DVAYNKISIIQNIAHL 256
++ N+IS ++ + L
Sbjct: 422 NLGANEISDVRPVEEL 437
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL N I++I GL+++ NLE L L + I+ + +LK+L + +
Sbjct: 560 EDLLQVKKLEILKEKGNEIKDITGLEYMTNLENLTLEGVGLKNIDFISNLKRLNNVNVSH 619
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
N+I I L L NL+ L L +N+I+ + L S+ L L L N +R + L
Sbjct: 620 NQIEDITPLSSLKNLQWLNLTENRITDVTVLGSMLDLLSLKLAENEIRDVRPL 672
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E++ +KKL++L+ N+I+ I L+ +TNLE L L + ID +++L +LN +++
Sbjct: 560 EDLLQVKKLEILKEKGNEIKDITGLEYMTNLENLTLEGVGLKNIDFISNLKRLNNVNVSH 619
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQ 260
N++ I L +L NL L L+EN +T + L S L +L +A N+I ++ + L +
Sbjct: 620 NQIEDITPLSSLKNLQWLNLTENRITDVTVLGSMLDLLSLKLAENEIRDVRPLIQLGQ-- 677
Query: 261 EFWI 264
W+
Sbjct: 678 --WV 679
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 51/87 (58%)
Query: 185 DNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAY 244
++L + KL IL + N ++ I LE +TNL L L GL I+ + + ++L ++V++
Sbjct: 560 EDLLQVKKLEILKEKGNEIKDITGLEYMTNLENLTLEGVGLKNIDFISNLKRLNNVNVSH 619
Query: 245 NKISIIQNIAHLTELQEFWINDNQVSD 271
N+I I ++ L LQ + +N+++D
Sbjct: 620 NQIEDITPLSSLKNLQWLNLTENRITD 646
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 26/151 (17%)
Query: 146 LKKLKVLELGDNK-IRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLR 204
L ++K L + K I I L+ +TNLE+L L ++ ++ I ++ L L + L N +
Sbjct: 216 LLQIKTLSIYSGKGINEIAGLEYMTNLEKLTLRESNVTDISAISKLRSLKYVDLTSNSIE 275
Query: 205 TIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWI 264
+I + L N+ L+L +N ++ + L +K++TLD+ N I IQ + L+ +++
Sbjct: 276 SIHPIGQLENINMLFLRDNKISDLTPLSKMKKIKTLDLIGNNIKDIQPLFTLSTMKQ--- 332
Query: 265 NDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+YL N ++
Sbjct: 333 ----------------------LYLANNQIS 341
>gi|254992468|ref|ZP_05274658.1| internalin E [Listeria monocytogenes FSL J2-064]
Length = 499
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
I +L + I IE + LT L ELEL DNQ+T + L L + L LS N ++++
Sbjct: 75 SITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVS 134
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L L +L+ L+L I+ + ++ L L+ L L N+I I L L+NL+ L LG
Sbjct: 135 ALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYT 194
Query: 180 KISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENL 231
++S + +A+L+KL IL+ + ++ I L +L++LT++YL EN ++ + L
Sbjct: 195 QVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPL 246
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 107/202 (52%), Gaps = 10/202 (4%)
Query: 115 IREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEEL 174
I I+G+ +L NL +L L N+I+ + + +L K+ L L N ++ + L GL +L+ L
Sbjct: 86 ITTIEGMQYLTNLSELELTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLKML 145
Query: 175 YLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQL---YLSENGLTTIENL 231
+L I+ + +LA LT L L+L N++ I L AL+NL L Y + LT I NL
Sbjct: 146 HLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLTPIANL 205
Query: 232 LSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDR 291
KL L+ K+S I +A L+ L E ++ +NQ+SD V+ L N L I L
Sbjct: 206 ---SKLTILNAENCKVSDISPLASLSSLTEVYLRENQISD---VSPLANIPNLSIIELTD 259
Query: 292 NPVAQDPNYRRKIKLVCPWIVQ 313
+ P Y + K++ P +++
Sbjct: 260 QIITNQPVYYQN-KIIVPNVIK 280
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
I L L N +K + + L +LK L L +T + +L L NL+ L+L N+I +I
Sbjct: 120 ITELGLSGNPLKDVSALAGLKSLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISP 179
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L L+NL+ L L ++S + + +L KL +L + K+ I L L++L E+YL +N+
Sbjct: 180 LAALSNLQTLSLGYTQVSDLTPIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQ 239
Query: 181 ISRIDNLASLTKLNILSL 198
IS + LA++ L+I+ L
Sbjct: 240 ISDVSPLANIPNLSIIEL 257
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFN------ 113
++ L L + I + ++ LT L+EL L NQ+T I L L NL+ L L +
Sbjct: 141 SLKMLHLIYTDITDVTSLAGLTNLQELNLDINQITDISPLAALSNLQTLSLGYTQVSDLT 200
Query: 114 ----------------RIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDN 157
++ +I L L++L ++YL N+IS + + ++ L ++EL D
Sbjct: 201 PIANLSKLTILNAENCKVSDISPLASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQ 260
Query: 158 KI 159
I
Sbjct: 261 II 262
>gi|119615907|gb|EAW95501.1| leucine rich repeat containing 50, isoform CRA_b [Homo sapiens]
Length = 609
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 86/147 (58%), Gaps = 4/147 (2%)
Query: 162 IENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLS 221
IENL+ T L L+L N I +I+NL + T+L L LQ N LR IENLE L L L LS
Sbjct: 122 IENLEEYTGLRCLWLQSNGIQKIENLEAQTELRCLFLQMNLLRKIENLEPLQKLDALNLS 181
Query: 222 ENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWIND---NQVSDWNTVNVL 278
N + TIENL L TL +A+N + +++I HL E + D N++SD +++L
Sbjct: 182 NNYIKTIENLSCLPVLNTLQMAHNHLETVEDIQHLQECLRLCVLDLSHNKLSDPEILSIL 241
Query: 279 ENNKQLQTIYLDRNPV-AQDPNYRRKI 304
E+ L+ + L NPV Q PNYRR +
Sbjct: 242 ESMPDLRVLNLMGNPVIRQIPNYRRTV 268
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 7/152 (4%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDH 123
L L + +IEN+ T L+ L L N + IENL+ L L L N +R+I+ L+
Sbjct: 112 LYLHFKGFDRIENLEEYTGLRCLWLQSNGIQKIENLEAQTELRCLFLQMNLLRKIENLEP 171
Query: 124 LANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLT---NLEELYLGKNK 180
L L+ L L +N I IEN+ L L L++ N + +E++ L L L L NK
Sbjct: 172 LQKLDALNLSNNYIKTIENLSCLPVLNTLQMAHNHLETVEDIQHLQECLRLCVLDLSHNK 231
Query: 181 ISRIDNLA---SLTKLNILSLQCNR-LRTIEN 208
+S + L+ S+ L +L+L N +R I N
Sbjct: 232 LSDPEILSILESMPDLRVLNLMGNPVIRQIPN 263
>gi|335427390|ref|ZP_08554321.1| Rab family protein [Haloplasma contractile SSD-17B]
gi|334895063|gb|EGM33243.1| Rab family protein [Haloplasma contractile SSD-17B]
Length = 1451
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 119/221 (53%), Gaps = 4/221 (1%)
Query: 75 ENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCS 134
EN + L L L NQ+T + L T L LDLS N+I ++ D L L L L
Sbjct: 1166 ENFSNMLNLNGLHLSGNQITDVTPLSTAPALIELDLSNNQITDLTNYDLLTYLFSLNLND 1225
Query: 135 NKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLN 194
N IS + + +L KL L L +N+I + L GLTNL LY N IS + L +L K+
Sbjct: 1226 NSISDLTPLANLTKLSSLRLNNNQISDLTPLGGLTNLTHLYAENNAISDLTPLTNLNKIW 1285
Query: 195 ILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIA 254
L L N++ + L +LT+L+ L ++ N +T + L N +L L + N IS + +A
Sbjct: 1286 YLVLNGNQISDLTALSSLTDLSYLRMNNNQITDLS-PLQNLRLSDLQLNNNLISDLSYLA 1344
Query: 255 HLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+ T + + +N+NQ+SD ++V+ N L+T+ LD N ++
Sbjct: 1345 NSTSISKLLLNNNQISD---ISVISNFTGLRTLELDDNMIS 1382
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 125/237 (52%), Gaps = 4/237 (1%)
Query: 60 CIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIK 119
+ L + I+ +E + T L +++L N ++ I L+ L LE ++L+ N ++
Sbjct: 1040 SLTSLYAGFYYIRSVEGLQYFTNLTKIDLLYNDISDITPLENLPLLEDINLNNNNFSDLS 1099
Query: 120 GLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKN 179
L ++ L+ L+L +N I+ + + +L L L L +N++ + L L NL+ +YL N
Sbjct: 1100 SLQNIKTLKNLWLENNNITDLSVLANLSNLDSLYLSNNQVSDLTPLINLANLQNVYLSNN 1159
Query: 180 KISRI-DNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLE 238
+++ + +N +++ LN L L N++ + L L +L LS N +T + N L
Sbjct: 1160 QVTTLPENFSNMLNLNGLHLSGNQITDVTPLSTAPALIELDLSNNQITDLTNYDLLTYLF 1219
Query: 239 TLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+L++ N IS + +A+LT+L +N+NQ+SD + L N L +Y + N ++
Sbjct: 1220 SLNLNDNSISDLTPLANLTKLSSLRLNNNQISDLTPLGGLTN---LTHLYAENNAIS 1273
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 132/260 (50%), Gaps = 8/260 (3%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
S + L L N I + N +LT L L L DN ++ + L L L L L+ N+I
Sbjct: 1191 STAPALIELDLSNNQITDLTNYDLLTYLFSLNLNDNSISDLTPLANLTKLSSLRLNNNQI 1250
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++ L L NL LY +N IS + + +L K+ L L N+I + L LT+L L
Sbjct: 1251 SDLTPLGGLTNLTHLYAENNAISDLTPLTNLNKIWYLVLNGNQISDLTALSSLTDLSYLR 1310
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
+ N+I+ + L +L +L+ L L N + + L T++++L L+ N ++ I + +
Sbjct: 1311 MNNNQITDLSPLQNL-RLSDLQLNNNLISDLSYLANSTSISKLLLNNNQISDISVISNFT 1369
Query: 236 KLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPV- 294
L TL++ N IS + ++ T L+ ++ +N +SD V L + L +YLD N +
Sbjct: 1370 GLRTLELDDNMISDLSALSSQTNLELLYLRNNLISD---VTPLTSLTTLWRLYLDGNNID 1426
Query: 295 AQDPNYRR---KIKLVCPWI 311
QDP+ +IKL P++
Sbjct: 1427 LQDPDTISALDEIKLSSPYV 1446
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
+ I +LLL N I I I T L+ LEL DN ++ + L + NLE+L L N I
Sbjct: 1344 ANSTSISKLLLNNNQISDISVISNFTGLRTLELDDNMISDLSALSSQTNLELLYLRNNLI 1403
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRI 161
++ L L L +LYL N I +++ D + L ++L + I
Sbjct: 1404 SDVTPLTSLTTLWRLYLDGNNI-DLQDPDTISALDEIKLSSPYVTI 1448
>gi|395510211|ref|XP_003759374.1| PREDICTED: leucine-rich repeat-containing protein 9 [Sarcophilus
harrisii]
Length = 1382
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 97/165 (58%), Gaps = 4/165 (2%)
Query: 108 LDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDG 167
L++ F+ I GL NL L + + ISKI ++ LK L L + I IE L+
Sbjct: 37 LEMFFSGYPCIVGLASFPNLTSLTVVAQNISKISGLESCTLLKELWLAECHITKIEGLEE 96
Query: 168 LTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTT 227
NLE+L+L NKI+ I+NL SLTKL ++ L N +R IE L+ L NL L L+ N +++
Sbjct: 97 CKNLEKLFLYYNKITEIENLESLTKLEVIWLNYNGIRAIEGLQNLKNLKDLNLAGNFISS 156
Query: 228 IENLLS-NEKLETLDVAYNKISIIQNIAHLTE---LQEFWINDNQ 268
I L NEK+E L+++ N+I ++ + HLT+ L++ +ND Q
Sbjct: 157 IGQCLDYNEKIERLNLSGNQICSLKELTHLTKLSRLKDLSLNDPQ 201
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 3/167 (1%)
Query: 53 DEESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSF 112
D+E E +L + ++ I + L L + ++ I L++ L+ L L+
Sbjct: 28 DQEGPETF--KLEMFFSGYPCIVGLASFPNLTSLTVVAQNISKISGLESCTLLKELWLAE 85
Query: 113 NRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLE 172
I +I+GL+ NLEKL+L NKI++IEN++ L KL+V+ L N IR IE L L NL+
Sbjct: 86 CHITKIEGLEECKNLEKLFLYYNKITEIENLESLTKLEVIWLNYNGIRAIEGLQNLKNLK 145
Query: 173 ELYLGKNKISRIDNLASLT-KLNILSLQCNRLRTIENLEALTNLTQL 218
+L L N IS I K+ L+L N++ +++ L LT L++L
Sbjct: 146 DLNLAGNFISSIGQCLDYNEKIERLNLSGNQICSLKELTHLTKLSRL 192
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 184 IDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVA 243
I LAS L L++ + I LE+ T L +L+L+E +T IE L + LE L +
Sbjct: 47 IVGLASFPNLTSLTVVAQNISKISGLESCTLLKELWLAECHITKIEGLEECKNLEKLFLY 106
Query: 244 YNKISIIQNIAHLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRN---PVAQDPNY 300
YNKI+ I+N+ LT+L+ W+N N + + L+N K L+ + L N + Q +Y
Sbjct: 107 YNKITEIENLESLTKLEVIWLNYNGI---RAIEGLQNLKNLKDLNLAGNFISSIGQCLDY 163
Query: 301 RRKI 304
KI
Sbjct: 164 NEKI 167
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 73/119 (61%), Gaps = 7/119 (5%)
Query: 146 LKKLKVLELGDNKI-RIIE-NLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRL 203
++ L+VL LG N I +I+ L+ L NL+ L+L N+IS+++ L +L+ L L L NR+
Sbjct: 1119 MQSLEVLHLGYNGICNLIQLQLNRLRNLKFLFLQGNEISQVEGLDNLSSLQELVLDHNRI 1178
Query: 204 RTIENLEAL--TNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQ 260
RTI + + ++L L+L EN L + +L KLE L + YNK IQ++A L +L+
Sbjct: 1179 RTITDSAFVKPSSLVALHLEENRLRELTHLKPLIKLEKLFLGYNK---IQDMAELEKLE 1234
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Query: 152 LELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEA 211
LE+ + I L NL L + IS+I L S T L L L + IE LE
Sbjct: 37 LEMFFSGYPCIVGLASFPNLTSLTVVAQNISKISGLESCTLLKELWLAECHITKIEGLEE 96
Query: 212 LTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWINDNQVSD 271
NL +L+L N +T IENL S KLE + + YN I I+ + +L L++ + N +S
Sbjct: 97 CKNLEKLFLYYNKITEIENLESLTKLEVIWLNYNGIRAIEGLQNLKNLKDLNLAGNFISS 156
Query: 272 WNTVNVLENNKQLQTIYLDRNPVA 295
L+ N++++ + L N +
Sbjct: 157 IG--QCLDYNEKIERLNLSGNQIC 178
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 78/148 (52%), Gaps = 26/148 (17%)
Query: 94 TVIENLDTLI-NLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVL 152
+V ENL ++ +LE+L L +N I NL +L L + L+ LK L
Sbjct: 1110 SVSENLPPIMQSLEVLHLGYNGI---------CNLIQLQL-----------NRLRNLKFL 1149
Query: 153 ELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL--TKLNILSLQCNRLRTIENLE 210
L N+I +E LD L++L+EL L N+I I + A + + L L L+ NRLR + +L+
Sbjct: 1150 FLQGNEISQVEGLDNLSSLQELVLDHNRIRTITDSAFVKPSSLVALHLEENRLRELTHLK 1209
Query: 211 ALTNLTQLYLSENGLTTIENLLSNEKLE 238
L L +L+L G I+++ EKLE
Sbjct: 1210 PLIKLEKLFL---GYNKIQDMAELEKLE 1234
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 123/281 (43%), Gaps = 44/281 (15%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK I++L++ +N +++++ L L+ L+ N + +E L+ L+ LDLS+N++
Sbjct: 707 SKLTGIQKLIISFNEFTCLDDVYYLYNLEYLDASHNHVITLEGFRGLVKLKYLDLSWNQL 766
Query: 116 REIKG-----LDHLANLEKLYLCSNK-----------ISKIENVDHLKKLKVLELGDNKI 159
++ H +NL L + N I +++ + HL L + E + KI
Sbjct: 767 KKTGDEINILCKHTSNLLNLDIRHNPWQKPATLRPSVIGRLKTLTHLNGLMITE--EEKI 824
Query: 160 RIIENLDG--LTNLEELYLGK------------------NKISRIDNLASL-----TKLN 194
+ G +T + L+ + ++++ + + +K+
Sbjct: 825 AATNFIAGTKITQVALLHHSRTNEARPRILSIWPSAKILTQMTKAEPFSHFGGNWYSKIT 884
Query: 195 ILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIA 254
L+L L I NLE L NL S N LT IE L S LE L + N IS ++ I+
Sbjct: 885 ALNLDGQNLFEITNLEKLVNLRWASFSNNNLTKIEGLDSCVNLEELTLDGNCISKLEGIS 944
Query: 255 HLTELQEFWINDNQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
L L IN+N ++ ++ EN L + L+ N +
Sbjct: 945 KLIRLTHLSINNNLLTGLEK-HIFENMLHLHYLSLENNKIT 984
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 44 AETTESKAED-EESKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTL 102
AE +K E EE K +E+L L +N I +IEN+ LT L+ + L N + IE L L
Sbjct: 84 AECHITKIEGLEECKN--LEKLFLYYNKITEIENLESLTKLEVIWLNYNGIRAIEGLQNL 141
Query: 103 INLEILDLSFNRIREI-KGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLE 153
NL+ L+L+ N I I + LD+ +E+L L N+I ++ + HL KL L+
Sbjct: 142 KNLKDLNLAGNFISSIGQCLDYNEKIERLNLSGNQICSLKELTHLTKLSRLK 193
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 96 IENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELG 155
I NL+ L+NL S N + +I+GLD NLE+L L N ISK+E + L +L L +
Sbjct: 896 ITNLEKLVNLRWASFSNNNLTKIEGLDSCVNLEELTLDGNCISKLEGISKLIRLTHLSIN 955
Query: 156 DNKIRIIEN--LDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRT---IENLE 210
+N + +E + + +L L L NKI+ + L + L + N + T I NL+
Sbjct: 956 NNLLTGLEKHIFENMLHLHYLSLENNKITSLVGLQKAYTIIELYINNNFIATNQEIYNLK 1015
Query: 211 ALTNLTQLYLSEN 223
L NL L L N
Sbjct: 1016 GLYNLVILDLCGN 1028
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 74 IENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLC 133
I N+ L L+ +N LT IE LD+ +NLE L L N I +++G+ L L L +
Sbjct: 896 ITNLEKLVNLRWASFSNNNLTKIEGLDSCVNLEELTLDGNCISKLEGISKLIRLTHLSIN 955
Query: 134 SNKISKIEN--VDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKIS---RIDNLA 188
+N ++ +E +++ L L L +NKI + L + ELY+ N I+ I NL
Sbjct: 956 NNLLTGLEKHIFENMLHLHYLSLENNKITSLVGLQKAYTIIELYINNNFIATNQEIYNLK 1015
Query: 189 SLTKLNILSLQCN 201
L L IL L N
Sbjct: 1016 GLYNLVILDLCGN 1028
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 64 LLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTL--INLEILDLSFNRIREIKGL 121
L L+ N I ++E + L++L+EL L N++ I + + +L L L NR+RE+ L
Sbjct: 1149 LFLQGNEISQVEGLDNLSSLQELVLDHNRIRTITDSAFVKPSSLVALHLEENRLRELTHL 1208
Query: 122 DHLANLEKLYLCSNKISKIENVDHLKKLKVL 152
L LEKL+L NKI +++ L+KL+++
Sbjct: 1209 KPLIKLEKLFLGYNKI---QDMAELEKLEIV 1236
>gi|434373600|ref|YP_006608244.1| internalin protein [Bacillus thuringiensis HD-789]
gi|401872157|gb|AFQ24324.1| internalin protein [Bacillus thuringiensis HD-789]
Length = 1009
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 128/231 (55%), Gaps = 4/231 (1%)
Query: 71 IKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKGLDHLANLEKL 130
I +I + +T L++L L ++ +T I + L +L+ +DL+ N I I + L N+ L
Sbjct: 230 INEIAGLEYMTNLEKLTLRESNVTDISAISKLRSLKYVDLTSNSIESIHPIGQLENINML 289
Query: 131 YLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASL 190
+L NKIS + + +KK+K L+L N I+ I+ L L+ +++LYL N+IS ++ + L
Sbjct: 290 FLRDNKISDLTPLSKMKKIKTLDLIGNNIKDIQPLFTLSTMKQLYLANNQISDLNGIDRL 349
Query: 191 TKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISII 250
+ +L + N++ +E++ ++NL +L ++++ + I L L+ L++ N IS I
Sbjct: 350 NNVELLWIGNNKINNVESISKMSNLIELEIADSEIKDISPLSQLGNLQVLNLEENYISDI 409
Query: 251 QNIAHLTELQEFWINDNQVSDWNTVNVLEN----NKQLQTIYLDRNPVAQD 297
++ LT L E + N++SD V L + Q Q I+L+ V ++
Sbjct: 410 SPLSTLTNLHEINLGANEISDVRPVEELGKRISIDIQRQKIFLNEASVDEE 460
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 109/192 (56%)
Query: 56 SKEVCIERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRI 115
SK ++ + L N I+ I I L + L L DN+++ + L + ++ LDL N I
Sbjct: 259 SKLRSLKYVDLTSNSIESIHPIGQLENINMLFLRDNKISDLTPLSKMKKIKTLDLIGNNI 318
Query: 116 REIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELY 175
++I+ L L+ +++LYL +N+IS + +D L +++L +G+NKI +E++ ++NL EL
Sbjct: 319 KDIQPLFTLSTMKQLYLANNQISDLNGIDRLNNVELLWIGNNKINNVESISKMSNLIELE 378
Query: 176 LGKNKISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNE 235
+ ++I I L+ L L +L+L+ N + I L LTNL ++ L N ++ + +
Sbjct: 379 IADSEIKDISPLSQLGNLQVLNLEENYISDISPLSTLTNLHEINLGANEISDVRPVEELG 438
Query: 236 KLETLDVAYNKI 247
K ++D+ KI
Sbjct: 439 KRISIDIQRQKI 450
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 106/196 (54%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E+L LR + + I I L +LK ++L N + I + L N+ +L L N+I ++
Sbjct: 242 LEKLTLRESNVTDISAISKLRSLKYVDLTSNSIESIHPIGQLENINMLFLRDNKISDLTP 301
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNK 180
L + ++ L L N I I+ + L +K L L +N+I + +D L N+E L++G NK
Sbjct: 302 LSKMKKIKTLDLIGNNIKDIQPLFTLSTMKQLYLANNQISDLNGIDRLNNVELLWIGNNK 361
Query: 181 ISRIDNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETL 240
I+ +++++ ++ L L + + ++ I L L NL L L EN ++ I L + L +
Sbjct: 362 INNVESISKMSNLIELEIADSEIKDISPLSQLGNLQVLNLEENYISDISPLSTLTNLHEI 421
Query: 241 DVAYNKISIIQNIAHL 256
++ N+IS ++ + L
Sbjct: 422 NLGANEISDVRPVEEL 437
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%)
Query: 97 ENLDTLINLEILDLSFNRIREIKGLDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGD 156
E+L + LEIL N I++I GL+++ NLE L L + I+ + +LK+L + +
Sbjct: 560 EDLLQVKKLEILKEKGNEIKDITGLEYMTNLENLTLEGVGLKNIDFISNLKRLNNVNVSH 619
Query: 157 NKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTIENL 209
N+I I L L NL+ L L +N+I+ + L S+ L L L N +R + L
Sbjct: 620 NQIEDITPLSSLKNLQWLNLTENRITDVTVLGSMLDLLSLKLAENEIRDVRPL 672
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 141 ENVDHLKKLKVLELGDNKIRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQC 200
E++ +KKL++L+ N+I+ I L+ +TNLE L L + ID +++L +LN +++
Sbjct: 560 EDLLQVKKLEILKEKGNEIKDITGLEYMTNLENLTLEGVGLKNIDFISNLKRLNNVNVSH 619
Query: 201 NRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQ 260
N++ I L +L NL L L+EN +T + L S L +L +A N+I ++ + L +
Sbjct: 620 NQIEDITPLSSLKNLQWLNLTENRITDVTVLGSMLDLLSLKLAENEIRDVRPLIQLGQ-- 677
Query: 261 EFWI 264
W+
Sbjct: 678 --WV 679
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 51/87 (58%)
Query: 185 DNLASLTKLNILSLQCNRLRTIENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAY 244
++L + KL IL + N ++ I LE +TNL L L GL I+ + + ++L ++V++
Sbjct: 560 EDLLQVKKLEILKEKGNEIKDITGLEYMTNLENLTLEGVGLKNIDFISNLKRLNNVNVSH 619
Query: 245 NKISIIQNIAHLTELQEFWINDNQVSD 271
N+I I ++ L LQ + +N+++D
Sbjct: 620 NQIEDITPLSSLKNLQWLNLTENRITD 646
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 108/240 (45%), Gaps = 40/240 (16%)
Query: 61 IERLLLRWNLIKKIENIHMLTTLKELELYDNQLTVIENLDTLINLEILDLSFNRIREIKG 120
+E L + N I +E+I ++ L ELE+ D+++ I L L NL++L+L N I +I
Sbjct: 352 VELLWIGNNKINNVESISKMSNLIELEIADSEIKDISPLSQLGNLQVLNLEENYISDISP 411
Query: 121 LDHLANLEKLYLCSNKISKIENVDHLKKLKVLELGDNKIRI------------IENLDG- 167
L L NL ++ L +N+IS + V+ L K +++ KI + + NL G
Sbjct: 412 LSTLTNLHEINLGANEISDVRPVEELGKRISIDIQRQKIFLNEASVDEELKIPVYNLKGE 471
Query: 168 -LTNL----EELYLGKNKIS-----------RIDNLASLTKL--------NILSLQCNRL 203
L N+ E L I ++D ++ +K+ NI+ Q R
Sbjct: 472 PLQNINVKSEGATLNNGFIKWNSPGEKIYEFKLDTNSTESKIRFNGTVIQNIVEKQKERA 531
Query: 204 RTIENLEALTNLTQLYLSE---NGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQ 260
I + ++ + L N T E+LL +KLE L N+I I + ++T L+
Sbjct: 532 NVILDKTLQQHINKENLGRENLNAPITKEDLLQVKKLEILKEKGNEIKDITGLEYMTNLE 591
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 26/149 (17%)
Query: 148 KLKVLELGDNK-IRIIENLDGLTNLEELYLGKNKISRIDNLASLTKLNILSLQCNRLRTI 206
++K L + K I I L+ +TNLE+L L ++ ++ I ++ L L + L N + +I
Sbjct: 218 QIKTLSIYSGKGINEIAGLEYMTNLEKLTLRESNVTDISAISKLRSLKYVDLTSNSIESI 277
Query: 207 ENLEALTNLTQLYLSENGLTTIENLLSNEKLETLDVAYNKISIIQNIAHLTELQEFWIND 266
+ L N+ L+L +N ++ + L +K++TLD+ N I IQ + L+ +++
Sbjct: 278 HPIGQLENINMLFLRDNKISDLTPLSKMKKIKTLDLIGNNIKDIQPLFTLSTMKQ----- 332
Query: 267 NQVSDWNTVNVLENNKQLQTIYLDRNPVA 295
+YL N ++
Sbjct: 333 --------------------LYLANNQIS 341
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.132 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,516,330,447
Number of Sequences: 23463169
Number of extensions: 177153705
Number of successful extensions: 842885
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5201
Number of HSP's successfully gapped in prelim test: 22803
Number of HSP's that attempted gapping in prelim test: 709703
Number of HSP's gapped (non-prelim): 81525
length of query: 319
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 177
effective length of database: 9,027,425,369
effective search space: 1597854290313
effective search space used: 1597854290313
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)