Query psy14735
Match_columns 340
No_of_seqs 147 out of 1438
Neff 9.5
Searched_HMMs 29240
Date Fri Aug 16 19:18:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14735.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14735hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ry7_A Ribokinase; transferase 100.0 4.3E-53 1.5E-57 382.7 30.1 301 14-324 2-304 (304)
2 1rkd_A Ribokinase; carbohydrat 100.0 9E-52 3.1E-56 374.9 31.9 306 12-327 2-307 (309)
3 2fv7_A Ribokinase; structural 100.0 7.5E-51 2.6E-55 372.2 34.1 304 13-323 23-328 (331)
4 3kzh_A Probable sugar kinase; 100.0 1.4E-50 4.9E-55 369.9 29.1 306 12-329 4-311 (328)
5 3ikh_A Carbohydrate kinase; tr 100.0 1E-50 3.5E-55 366.2 23.6 289 14-331 2-292 (299)
6 2rbc_A Sugar kinase, AGR_C_456 100.0 1.9E-49 6.4E-54 364.3 26.6 301 11-327 26-328 (343)
7 1vm7_A Ribokinase; TM0960, str 100.0 4.7E-49 1.6E-53 357.2 28.5 297 13-327 13-310 (311)
8 3go6_A Ribokinase RBSK; phosph 100.0 5.6E-49 1.9E-53 356.4 24.9 290 12-335 17-310 (310)
9 3iq0_A Putative ribokinase II; 100.0 5.9E-49 2E-53 359.5 23.9 302 12-332 1-317 (330)
10 3vas_A Putative adenosine kina 100.0 4E-49 1.4E-53 365.7 22.6 301 10-322 20-365 (370)
11 2nwh_A AGR_C_3442P, carbohydra 100.0 1.9E-48 6.6E-53 354.2 25.5 300 14-326 3-306 (317)
12 2c4e_A Sugar kinase MJ0406; tr 100.0 5.4E-49 1.8E-53 355.5 21.0 290 14-327 5-299 (302)
13 3ljs_A Fructokinase; fructokia 100.0 6.8E-49 2.3E-53 360.3 19.3 299 13-330 3-331 (338)
14 3pl2_A Sugar kinase, ribokinas 100.0 1.1E-47 3.7E-52 349.6 25.5 299 8-327 2-317 (319)
15 3h49_A Ribokinase; transferase 100.0 2.4E-47 8.1E-52 348.2 26.7 305 11-331 2-318 (325)
16 3ktn_A Carbohydrate kinase, PF 100.0 7.3E-48 2.5E-52 354.6 23.4 302 14-332 2-336 (346)
17 3hj6_A Fructokinase, FRK; fruc 100.0 2.8E-49 9.6E-54 361.2 13.7 304 2-326 9-326 (327)
18 3umo_A 6-phosphofructokinase i 100.0 1.6E-46 5.4E-51 340.4 30.5 296 14-329 1-308 (309)
19 4e3a_A Sugar kinase protein; s 100.0 2.6E-47 9E-52 351.3 22.9 296 11-323 22-348 (352)
20 4du5_A PFKB; structural genomi 100.0 5.5E-47 1.9E-51 347.2 24.2 290 14-324 26-334 (336)
21 3loo_A Anopheles gambiae adeno 100.0 1.4E-47 4.9E-52 354.9 18.9 298 12-322 21-362 (365)
22 3otx_A Adenosine kinase, putat 100.0 4.9E-47 1.7E-51 349.2 22.2 296 13-321 6-345 (347)
23 2v78_A Fructokinase; transfera 100.0 2.9E-46 1E-50 339.2 26.9 289 15-328 2-311 (313)
24 2jg1_A Tagatose-6-phosphate ki 100.0 1.5E-45 5.3E-50 336.8 29.4 294 15-329 21-326 (330)
25 2dcn_A Hypothetical fructokina 100.0 5.8E-46 2E-50 337.0 25.7 289 14-328 1-309 (311)
26 3cqd_A 6-phosphofructokinase i 100.0 1.8E-45 6.3E-50 333.4 28.4 293 15-328 2-307 (309)
27 2f02_A Tagatose-6-phosphate ki 100.0 2.2E-45 7.5E-50 334.9 28.8 294 15-329 3-309 (323)
28 1v1a_A 2-keto-3-deoxygluconate 100.0 1.9E-45 6.5E-50 333.3 28.1 286 15-327 2-303 (309)
29 2ajr_A Sugar kinase, PFKB fami 100.0 9.5E-46 3.2E-50 338.4 26.3 296 12-328 10-325 (331)
30 2qcv_A Putative 5-dehydro-2-de 100.0 1.6E-45 5.6E-50 337.0 27.2 301 12-328 9-326 (332)
31 2hlz_A Ketohexokinase; non-pro 100.0 1.1E-44 3.7E-49 328.7 32.3 289 6-312 9-309 (312)
32 4e84_A D-beta-D-heptose 7-phos 100.0 1.6E-45 5.3E-50 339.2 26.4 294 11-322 50-351 (352)
33 2pkf_A Adenosine kinase; trans 100.0 3.6E-46 1.2E-50 341.6 21.6 295 15-328 11-320 (334)
34 3ie7_A LIN2199 protein; phosph 100.0 2.6E-45 8.8E-50 334.1 27.0 293 15-332 3-308 (320)
35 3lhx_A Ketodeoxygluconokinase; 100.0 1.9E-45 6.5E-50 334.7 23.7 280 15-321 5-310 (319)
36 1tyy_A Putative sugar kinase; 100.0 2.4E-46 8.1E-51 343.4 17.1 288 12-328 22-330 (339)
37 3b1n_A Ribokinase, putative; r 100.0 1.3E-45 4.5E-50 336.6 20.8 288 16-327 2-305 (326)
38 2abq_A Fructose 1-phosphate ki 100.0 4E-44 1.4E-48 324.2 30.0 288 17-328 3-298 (306)
39 1bx4_A Protein (adenosine kina 100.0 9.2E-46 3.1E-50 340.4 19.2 294 13-319 5-342 (345)
40 2jg5_A Fructose 1-phosphate ki 100.0 4.5E-44 1.5E-48 323.8 28.8 288 17-328 3-298 (306)
41 4e69_A 2-dehydro-3-deoxyglucon 100.0 2E-44 6.8E-49 329.1 26.4 275 12-313 21-317 (328)
42 3ewm_A Uncharacterized sugar k 100.0 1.7E-44 5.9E-49 327.6 25.5 287 14-332 1-305 (313)
43 3uq6_A Adenosine kinase, putat 100.0 9.4E-45 3.2E-49 336.7 24.1 303 14-325 26-370 (372)
44 3bf5_A Ribokinase related prot 100.0 8E-45 2.7E-49 328.5 16.6 278 11-327 17-300 (306)
45 2abs_A Adenosine kinase, AK; r 100.0 2.7E-43 9.1E-48 328.4 25.0 289 12-312 30-375 (383)
46 2afb_A 2-keto-3-deoxygluconate 100.0 1.5E-42 5E-47 319.8 27.9 297 12-327 10-343 (351)
47 2qhp_A Fructokinase; NP_810670 100.0 2.2E-42 7.4E-47 311.3 26.0 273 14-315 3-287 (296)
48 4gm6_A PFKB family carbohydrat 100.0 2.8E-43 9.6E-48 324.6 18.9 304 12-330 22-347 (351)
49 3kd6_A Carbohydrate kinase, PF 100.0 4E-42 1.4E-46 311.9 21.6 286 15-332 3-302 (313)
50 1vk4_A PFKB carbohydrate kinas 100.0 1.4E-39 4.8E-44 293.2 17.0 269 17-323 14-294 (298)
51 2yxt_A Pyridoxal kinase; beta 99.9 1.4E-24 4.9E-29 196.3 13.7 215 67-308 12-269 (312)
52 2ddm_A Pyridoxine kinase; pyri 99.9 6.6E-24 2.3E-28 189.3 15.0 212 71-310 27-268 (283)
53 1jxh_A Phosphomethylpyrimidine 99.9 3.7E-23 1.3E-27 184.9 13.9 173 130-310 76-270 (288)
54 1ub0_A THID, phosphomethylpyri 99.9 7.9E-23 2.7E-27 179.9 13.8 157 145-309 70-244 (258)
55 2i5b_A Phosphomethylpyrimidine 99.9 3.8E-21 1.3E-25 170.3 17.8 158 145-310 74-251 (271)
56 3pzs_A PM kinase, pyridoxamine 99.8 3.6E-19 1.2E-23 158.9 15.0 171 130-309 56-260 (289)
57 3h74_A Pyridoxal kinase; PSI-I 99.8 3.6E-19 1.2E-23 158.1 12.6 156 145-309 74-249 (282)
58 3mbh_A Putative phosphomethylp 99.8 2.1E-18 7.1E-23 154.0 16.3 176 145-328 77-279 (291)
59 3zs7_A Pyridoxal kinase; trans 99.8 3.9E-18 1.3E-22 152.7 16.0 175 130-309 55-262 (300)
60 1ekq_A Hydroxyethylthiazole ki 99.7 6.9E-16 2.4E-20 136.2 13.6 148 143-300 56-223 (272)
61 3rm5_A Hydroxymethylpyrimidine 99.6 5E-14 1.7E-18 136.1 15.1 157 145-306 91-273 (550)
62 1v8a_A Hydroxyethylthiazole ki 99.3 2E-11 6.9E-16 107.0 11.5 153 142-305 53-224 (265)
63 2r3b_A YJEF-related protein; p 99.1 4.9E-10 1.7E-14 100.1 10.6 147 143-307 109-267 (310)
64 3rpz_A ADP/ATP-dependent NAD(P 99.0 1.3E-09 4.4E-14 95.8 11.6 171 143-326 96-272 (279)
65 3bgk_A SMU.573, putative uncha 99.0 7.1E-10 2.4E-14 99.1 8.4 151 143-307 123-284 (311)
66 3rss_A Putative uncharacterize 99.0 4.8E-09 1.6E-13 99.6 13.1 181 131-326 306-494 (502)
67 3dzv_A 4-methyl-5-(beta-hydrox 98.9 3.5E-08 1.2E-12 86.2 16.6 156 133-301 49-229 (273)
68 3drw_A ADP-specific phosphofru 98.5 4.2E-07 1.5E-11 84.5 11.2 228 47-284 113-467 (474)
69 3nl6_A Thiamine biosynthetic b 98.4 1.3E-05 4.3E-10 76.7 17.9 154 140-301 300-495 (540)
70 3hpd_A Hydroxyethylthiazole ki 98.3 1.3E-05 4.3E-10 69.4 13.4 147 143-300 54-219 (265)
71 1ua4_A Glucokinase, ADP-depend 98.1 2E-05 6.9E-10 73.4 11.7 182 49-239 109-343 (455)
72 1l2l_A ADP-dependent glucokina 98.0 0.00019 6.4E-09 66.7 15.9 181 49-239 112-346 (457)
73 1gc5_A ADP-dependent glucokina 98.0 0.00016 5.6E-09 67.3 15.1 183 49-238 117-352 (467)
74 3k5w_A Carbohydrate kinase; 11 97.9 4.8E-05 1.7E-09 71.5 9.7 169 143-326 290-465 (475)
75 3sho_A Transcriptional regulat 61.5 17 0.00058 28.6 6.1 102 130-243 23-126 (187)
76 3vzx_A Heptaprenylglyceryl pho 47.9 65 0.0022 26.6 7.5 61 130-200 18-80 (228)
77 2fcj_A Small toprim domain pro 47.8 12 0.00041 27.6 2.7 69 135-206 15-87 (119)
78 3w01_A Heptaprenylglyceryl pho 47.4 1.1E+02 0.0038 25.4 8.8 64 127-200 20-85 (235)
79 3fxa_A SIS domain protein; str 46.9 19 0.00066 28.8 4.2 100 130-243 28-131 (201)
80 2xhz_A KDSD, YRBH, arabinose 5 45.3 27 0.00093 27.3 4.8 99 130-243 33-135 (183)
81 3etn_A Putative phosphosugar i 43.8 48 0.0017 26.9 6.2 102 130-243 38-147 (220)
82 3rd5_A Mypaa.01249.C; ssgcid, 34.9 54 0.0018 27.7 5.3 23 51-73 26-48 (291)
83 4fk1_A Putative thioredoxin re 34.9 28 0.00096 29.7 3.5 20 54-73 18-37 (304)
84 1m3s_A Hypothetical protein YC 33.7 1.1E+02 0.0037 23.7 6.7 97 129-243 20-118 (186)
85 3ijl_A Muconate cycloisomerase 33.5 1.5E+02 0.005 25.9 8.0 100 126-236 179-279 (338)
86 1vim_A Hypothetical protein AF 32.9 96 0.0033 24.6 6.3 95 131-243 32-128 (200)
87 2gk4_A Conserved hypothetical 32.4 43 0.0015 27.8 4.0 25 49-73 27-51 (232)
88 1yxm_A Pecra, peroxisomal tran 31.4 53 0.0018 27.9 4.7 23 51-73 28-50 (303)
89 3v7e_A Ribosome-associated pro 30.7 43 0.0015 22.6 3.2 35 144-181 26-60 (82)
90 3c8f_A Pyruvate formate-lyase 30.1 2.1E+02 0.0072 22.8 10.1 82 147-234 71-163 (245)
91 3urh_A Dihydrolipoyl dehydroge 29.5 44 0.0015 30.9 4.1 21 53-73 36-56 (491)
92 1u7z_A Coenzyme A biosynthesis 29.2 51 0.0017 27.2 4.0 24 49-72 32-55 (226)
93 4iin_A 3-ketoacyl-acyl carrier 28.3 79 0.0027 26.3 5.2 43 51-95 39-81 (271)
94 3can_A Pyruvate-formate lyase- 26.6 2.2E+02 0.0074 21.8 9.3 72 157-234 18-95 (182)
95 1y7p_A Hypothetical protein AF 26.6 83 0.0029 25.8 4.6 58 142-209 142-200 (223)
96 2l82_A Designed protein OR32; 25.7 1.6E+02 0.0056 20.9 5.5 45 135-182 67-111 (162)
97 1jeo_A MJ1247, hypothetical pr 25.7 95 0.0032 23.9 4.9 94 132-243 26-121 (180)
98 2hqm_A GR, grase, glutathione 24.8 44 0.0015 30.8 3.1 20 54-73 23-42 (479)
99 3k96_A Glycerol-3-phosphate de 24.4 64 0.0022 28.6 4.0 41 50-97 37-77 (356)
100 2dha_A FLJ20171 protein; RRM d 24.4 89 0.003 22.8 4.2 44 49-93 6-49 (123)
101 3jva_A Dipeptide epimerase; en 24.2 2.6E+02 0.0088 24.5 8.0 98 127-235 190-289 (354)
102 1evy_A Glycerol-3-phosphate de 23.8 36 0.0012 30.1 2.2 43 1-71 1-44 (366)
103 1mo9_A ORF3; nucleotide bindin 23.5 81 0.0028 29.4 4.8 23 51-73 52-74 (523)
104 3ouz_A Biotin carboxylase; str 23.2 59 0.002 29.6 3.7 20 53-72 17-36 (446)
105 1ryi_A Glycine oxidase; flavop 22.7 57 0.0019 28.6 3.4 23 51-73 26-48 (382)
106 3i3l_A Alkylhalidase CMLS; fla 22.3 73 0.0025 30.4 4.2 21 53-73 34-54 (591)
107 3j21_Z 50S ribosomal protein L 21.9 1.1E+02 0.0039 21.1 4.2 33 144-179 30-62 (99)
108 3nvt_A 3-deoxy-D-arabino-heptu 21.5 2.8E+02 0.0095 24.8 7.6 81 156-241 191-287 (385)
109 3mvn_A UDP-N-acetylmuramate:L- 21.4 2.7E+02 0.0092 21.1 7.1 26 219-244 124-150 (163)
110 2lkz_A RNA-binding protein 5; 21.4 1.4E+02 0.0047 20.4 4.5 41 65-106 8-49 (95)
111 3r0u_A Enzyme of enolase super 21.3 2.3E+02 0.0079 25.1 7.1 97 127-234 193-293 (379)
112 2gag_B Heterotetrameric sarcos 21.0 81 0.0028 27.8 4.1 23 51-73 30-54 (405)
113 2wqp_A Polysialic acid capsule 21.0 1.3E+02 0.0045 26.5 5.3 79 155-238 88-181 (349)
114 1vs1_A 3-deoxy-7-phosphoheptul 20.9 1.8E+02 0.0062 24.7 6.0 80 157-241 88-183 (276)
115 3o0h_A Glutathione reductase; 20.6 67 0.0023 29.6 3.5 23 51-73 35-57 (484)
116 3cpq_A 50S ribosomal protein L 20.6 97 0.0033 22.1 3.6 32 144-178 36-67 (110)
117 3i4e_A Isocitrate lyase; struc 20.5 4.2E+02 0.014 24.2 8.5 79 134-239 272-353 (439)
118 3v7q_A Probable ribosomal prot 20.0 1.3E+02 0.0044 21.0 4.1 34 144-180 34-67 (101)
No 1
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=100.00 E-value=4.3e-53 Score=382.68 Aligned_cols=301 Identities=28% Similarity=0.405 Sum_probs=279.8
Q ss_pred CCcEEEEcccccceeeecCCCCCCCCee-ecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcC
Q psy14735 14 EADIVVVGSCLVEFITYVQTLPKPEETV-KGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNS 92 (340)
Q Consensus 14 ~~~I~viG~~~iD~~~~~~~~~~~~~~~-~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~g 92 (340)
|++|+++|++++|+++.++++|.+++++ +.......+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .|
T Consensus 2 m~~v~viG~~~~D~~~~~~~~p~~g~~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~~~~vG~D~~g~~i~~~l~~-~g 80 (304)
T 3ry7_A 2 TNKVVILGSTNVDQFLTVERYAQPGETLHVEEAQKAFGGGKGANQAIATARMQADTTFITKIGTDGVADFILEDFKV-AH 80 (304)
T ss_dssp CCEEEEECCCEEEEEEECSSCCCTTCCCCCSSCCEEEEECHHHHHHHHHHHTTCEEEEECEEESSCTTHHHHHHHHH-TT
T ss_pred CCcEEEEccceeEEEEeccCCCCCCCceecccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCChHHHHHHHHHHH-cC
Confidence 5799999999999999999999999988 888899999999999999999999999999999999999999999999 99
Q ss_pred CcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEEEEeCCCCHHHHHHHHHhchhccc
Q psy14735 93 INTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVIMFQGETPWETTLYCLSKLHVSLE 172 (340)
Q Consensus 93 i~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~a~~~~~ 172 (340)
|+++++.+.++.+|+.+++.++++|+++++.+.+++..+++++++.+.+.+++++++++++..+.+...++++.+ ++
T Consensus 81 v~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a---~~ 157 (304)
T 3ry7_A 81 IDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVINAKDAIINADFVVAQLEVPIPAIISAFEIA---KA 157 (304)
T ss_dssp CBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHTTHHHHHTCSEEEEETTSCHHHHHHHHHHH---HH
T ss_pred CcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHHHHHHhccCCEEEEcCCCCHHHHHHHHHHH---HH
Confidence 999999887788999999999999999988888888889999887655568899999999999999999999999 99
Q ss_pred CCceEEEeCCCCCCCCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCceEEEecCCC
Q psy14735 173 SRAKIIVNPSPAVYPLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSGVVYATRDNP 252 (340)
Q Consensus 173 ~~~~v~~d~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~ 252 (340)
++.++++|+.+. .+....+++++|++++|++|++.|++....+.+++.++++.|+++|++.++||+|++|+++++++
T Consensus 158 ~~~~v~~D~~~~-~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~-- 234 (304)
T 3ry7_A 158 HGVTTVLNPAPA-KALPNELLSLIDIIVPNETEAELLSGIKVTNEQSMKDNANYFLSIGIKTVLITLGKQGTYFATKN-- 234 (304)
T ss_dssp TTCEEEEECCSC-CCCCHHHHTTCSEECCBHHHHHHHHSCCCCSHHHHHHHHHHHHHTTCCEEEEECGGGCEEEECSS--
T ss_pred cCCEEEEeCCcc-ccccHHHHHhCCEEecCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEeCCCceEEEECC--
Confidence 999999999875 34667899999999999999999999887777888999999999999999999999999999876
Q ss_pred ceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHHHHhcccCCCCCCCCccCcchh
Q psy14735 253 RLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQ-LPLGEIILRSCHVARQSLFNVGLQNSFPDKETLPDN 324 (340)
Q Consensus 253 ~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g-~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~~~ 324 (340)
+.+++|+ ++++++|++||||+|.|+|++++++ | +++++|+++|+++|+.+|++.|+.+++|++++++++
T Consensus 235 ~~~~~~~-~~v~~vdttGAGDaf~a~~~~~l~~--g~~~~~~a~~~A~~~aa~~~~~~G~~~~~p~~~ev~~~ 304 (304)
T 3ry7_A 235 QSQHIEA-YKVNAIDTTAAGDTFIGAFVSRLNK--SQDNLADAIDFGNKASSLTVQKHGAQASIPLLEEVNQV 304 (304)
T ss_dssp CEEEECC-SSCCSSCCSSHHHHHHHHHHHHCCT--TCTTHHHHHHHHHHHHHTTSCCCCTGGGCCCHHHHHTC
T ss_pred eeEEecC-CCcccCCCCCchHHHHHHHHHHHHc--CCCCHHHHHHHHHHHHHHHhCCCCccccCCCHHHHhhC
Confidence 6889999 8899999999999999999999999 9 999999999999999999999999899999998753
No 2
>1rkd_A Ribokinase; carbohydrate kinase, ribose, nucleotide binding, transferase; HET: RIB ADP; 1.84A {Escherichia coli} SCOP: c.72.1.1 PDB: 1gqt_A* 1rka_A 1rk2_A* 1rks_A*
Probab=100.00 E-value=9e-52 Score=374.87 Aligned_cols=306 Identities=31% Similarity=0.443 Sum_probs=277.7
Q ss_pred CCCCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhc
Q psy14735 12 KDEADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYN 91 (340)
Q Consensus 12 ~~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~ 91 (340)
++|++|+++|++++|+++.++++|.++++++.......+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .
T Consensus 2 ~~~~~v~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~N~A~~la~lG~~~~~~~~vG~D~~g~~i~~~L~~-~ 80 (309)
T 1rkd_A 2 QNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLAT-D 80 (309)
T ss_dssp --CCEEEEECCCEEEEEEECSSCCCTTCCCCCCCEEEEEECHHHHHHHHHHHHTCEEEEEEEEESSTTHHHHHHHHHT-T
T ss_pred CCCCeEEEECcceEeEEEecCCCCCCCCeeecCceeecCCCHHHHHHHHHHhCCCceEEEEEECCCHHHHHHHHHHHH-c
Confidence 345689999999999999999999999988888899999999999999999999999999999999999999999999 9
Q ss_pred CCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEEEEeCCCCHHHHHHHHHhchhcc
Q psy14735 92 SINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVIMFQGETPWETTLYCLSKLHVSL 171 (340)
Q Consensus 92 gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~a~~~~ 171 (340)
||+++++.+.++.+|+.+++.++++|++++....+++..+++++++.+.+.++.++++++++..+.+...++++.+ +
T Consensus 81 gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a---~ 157 (309)
T 1rkd_A 81 NIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIA---H 157 (309)
T ss_dssp TEECTTEEEETTCCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHTTHHHHHHCSEEEECSSSCHHHHHHHHHHH---H
T ss_pred CCCccceEecCCCCCceEEEEECCCCCeEEEEeCCchhcCCHHHHHHHHHhcccCCEEEEeCCCCHHHHHHHHHHH---H
Confidence 9999999877778999999999988999988777787789998887544557889999999998989999999999 8
Q ss_pred cCCceEEEeCCCCCCCCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCceEEEecCC
Q psy14735 172 ESRAKIIVNPSPAVYPLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSGVVYATRDN 251 (340)
Q Consensus 172 ~~~~~v~~d~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~ 251 (340)
+++.++++|+.+. ......+++++|++++|++|++.|++....+.+++.++++.|+++|++.|+||+|++|+++++++
T Consensus 158 ~~g~~v~~D~~~~-~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~- 235 (309)
T 1rkd_A 158 QNKTIVALNPAPA-RELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNG- 235 (309)
T ss_dssp HTTCEEEECCCSC-CCCCHHHHTTCSEECCCHHHHHHHHSCCCSSHHHHHHHHHHHHHTTCSEEEEECGGGCEEEEETT-
T ss_pred HcCCEEEEECCcc-ccchHHHHhhCCEEEcCHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEEECCCcEEEEeCC-
Confidence 8999999999865 22456889999999999999999999876666788889999999999999999999999998876
Q ss_pred CceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCcchhhhh
Q psy14735 252 PRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKETLPDNLFS 327 (340)
Q Consensus 252 ~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~~~l~~ 327 (340)
+.+++|+ ++++++||+||||+|.|+|++++++ |+++++|+++|+++|+.++++.|+.+.+|+++++++++.+
T Consensus 236 -~~~~~~~-~~v~~vdt~GAGD~f~a~~~~~l~~--g~~~~~a~~~a~~~aa~~~~~~G~~~~~p~~~ev~~~~~~ 307 (309)
T 1rkd_A 236 -EGQRVPG-FRVQAVDTIAAGDTFNGALITALLE--EKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFLDR 307 (309)
T ss_dssp -EEEEECC-CCCCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHTSSSSGGGCCCHHHHHHHHHT
T ss_pred -ceEEcCC-CCCCcCCCCChHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHcCCCCccCCCCCHHHHHHHHhc
Confidence 6888999 8889999999999999999999999 9999999999999999999999998889999999988864
No 3
>2fv7_A Ribokinase; structural genomics, structural genomics consort transferase; HET: ADP; 2.10A {Homo sapiens} SCOP: c.72.1.1
Probab=100.00 E-value=7.5e-51 Score=372.22 Aligned_cols=304 Identities=39% Similarity=0.662 Sum_probs=274.2
Q ss_pred CCCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcC
Q psy14735 13 DEADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNS 92 (340)
Q Consensus 13 ~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~g 92 (340)
+|++|+++|++++|+++.++++|.++++++.......+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .|
T Consensus 23 ~~~~vlviG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~-~G 101 (331)
T 2fv7_A 23 EVAAVVVVGSCMTDLVSLTSRLPKTGETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQ-ND 101 (331)
T ss_dssp -CCSEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHT-TT
T ss_pred ccCCEEEECcccEEEEEecCCCCCCCceEecCceEECcCCHHHHHHHHHHHCCCCeEEEEEECCChhHHHHHHHHHH-cC
Confidence 34689999999999999999999999988888889999999999999999999999999999999999999999999 99
Q ss_pred CcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEEEEeCCCCHHHHHHHHHhchhccc
Q psy14735 93 INTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVIMFQGETPWETTLYCLSKLHVSLE 172 (340)
Q Consensus 93 i~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~a~~~~~ 172 (340)
|+++++.+.++.+|+.++++++++|+++++.+.+++..+++++++...+.++.++++++++..+.+....+++.+ ++
T Consensus 102 v~~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~l~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~~~~~a---~~ 178 (331)
T 2fv7_A 102 ISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRAAANVISRAKVMVCQLEITPATSLEALTMA---RR 178 (331)
T ss_dssp EECTTEEEESSSCCEEEEEEECTTSCEEEEEECGGGGGCCHHHHHHTHHHHHHCSEEEECSSSCHHHHHHHHHHH---HH
T ss_pred CcceeeEecCCCCCceEEEEECCCCCeEEEecCCccccCCHHHHHHHHHhhccCCEEEEecCCCHHHHHHHHHHH---HH
Confidence 999999887778999999999988999988888877789998887654557789999999888888899999999 88
Q ss_pred CCceEEEeCCCCCCCCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCceEEEecCCC
Q psy14735 173 SRAKIIVNPSPAVYPLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSGVVYATRDNP 252 (340)
Q Consensus 173 ~~~~v~~d~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~ 252 (340)
.+.++++||.+........+++.+|++++|++|++.|++....+.+++.++++.|.++|++.|+||+|++|++++++++.
T Consensus 179 ~g~~v~~Dp~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~G~~~~~~~~~ 258 (331)
T 2fv7_A 179 SGVKTLFNPAPAIADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQVVIITLGAEGCVVLSQTEP 258 (331)
T ss_dssp TTCEEEECCCSCCTTCCTHHHHTCSEEEEEHHHHHHHHSSCCCSHHHHHHHHHHHHTTTCSEEEEECGGGCEEEEESSCC
T ss_pred cCCEEEEeCCcccccchHHHHhcCCEEEeCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEECCCceEEEECCCC
Confidence 89999999986533455688999999999999999999987666678888999999999999999999999999876511
Q ss_pred ceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCC--CCHHHHHHHHHHHHHHHhcccCCCCCCCCccCcch
Q psy14735 253 RLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQ--LPLGEIILRSCHVARQSLFNVGLQNSFPDKETLPD 323 (340)
Q Consensus 253 ~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g--~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~~ 323 (340)
+.+++|+ ++++++||+||||+|.|+|++++++ | +++++|+++|+++|+.++++.|+.+.+|+++++++
T Consensus 259 ~~~~~~~-~~v~vvdttGAGDaf~a~~~~~l~~--g~~~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~ 328 (331)
T 2fv7_A 259 EPKHIPT-EKVKAVDTTGAGDSFVGALAFYLAY--YPNLSLEDMLNRSNFIAAVSVQAAGTQSSYPYKKDLPL 328 (331)
T ss_dssp SCEEECC-CCCCCSCCTTHHHHHHHHHHHHHHH--CTTSCHHHHHHHHHHHHHHHHTSSSGGGGCCCGGGSCG
T ss_pred ceeEecC-CCCccCCCCCchHHHHHHHHHHHHh--CCCCCHHHHHHHHHHHHHHHhCCCCCccCCCCHHHHhh
Confidence 3678899 8889999999999999999999999 9 99999999999999999999999888999999876
No 4
>3kzh_A Probable sugar kinase; NYSGXRC, PSI-II, protein structure initiative, modified lysin, structural genomics; HET: BGC; 2.45A {Clostridium perfringens}
Probab=100.00 E-value=1.4e-50 Score=369.91 Aligned_cols=306 Identities=20% Similarity=0.306 Sum_probs=274.2
Q ss_pred CCCCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhc
Q psy14735 12 KDEADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYN 91 (340)
Q Consensus 12 ~~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~ 91 (340)
+++++|+|+|++++|++..++..|.++++... .....+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .
T Consensus 4 ~~~~~v~viG~~~vD~~~~~~~~~~~g~~~~~-~~~~~~GG~~~NvA~~la~LG~~v~~i~~vG~D~~g~~i~~~L~~-~ 81 (328)
T 3kzh_A 4 RKEPYLLVFGASVVDVFGFSKASYRPYNSTPG-HVKISFGGVCRNIAENMARVGVNTNFMSILGNDEHGKSIVEHSKK-I 81 (328)
T ss_dssp CCCCCEEEECCCEEEEEEEESSCCCTTSEEEE-EEEEEEECHHHHHHHHHHHTTCCEEEECEECSSHHHHHHHHHHHH-H
T ss_pred CCCCcEEEECcEEeeeeeccCCCCCCCCCceE-EEEEccCcHHHHHHHHHHHcCCCcEEEEEecCcHHHHHHHHHHHH-c
Confidence 34679999999999999999999999988887 888999999999999999999999999999999999999999999 9
Q ss_pred CCcccceEeeCCCCCceEEEEEcCCCCeEEEEe-CCcCCCCCHHHHHHHHhhccCCcEEEEeCCCCHHHHHHHHHhchhc
Q psy14735 92 SINTKYIWLLQDVTTGVCSKVISNKGTHQTNII-PGANTYLSASDIDAAKNLLLKAKVIMFQGETPWETTLYCLSKLHVS 170 (340)
Q Consensus 92 gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~a~~~ 170 (340)
||+++++...++.+|+.++++++++|++++.+. .+....+++++++...+.+..++++++++..+ +....+++ +
T Consensus 82 gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~-a--- 156 (328)
T 3kzh_A 82 GYHMDDSMVIEGGSTPTYLAILDENGEMVSAIADMKSIGAMNTDFIDSKREIFENAEYTVLDSDNP-EIMEYLLK-N--- 156 (328)
T ss_dssp TEECTTCEECTTCCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHHHTHHHHHTCSEEEEESSCH-HHHHHHHH-H---
T ss_pred CCCccceEEeCCCCCeeEEEEEcCCCCEEEEEEchhhhhhCCHHHHHHHHHhhccCCEEEEeCCcH-HHHHHHHH-H---
Confidence 999999877777899999999999999987543 45566788888876556688999999999877 77777777 7
Q ss_pred ccCCceEEEeCCCCC-CCCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCceEEEec
Q psy14735 171 LESRAKIIVNPSPAV-YPLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSGVVYATR 249 (340)
Q Consensus 171 ~~~~~~v~~d~~~~~-~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~ 249 (340)
++.+.++++|+.+.. .+.+..+++.+|++++|++|++.|++....+.+++.++++.|.++|++.++||+|++|++++++
T Consensus 157 ~~~~~~v~~D~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~ 236 (328)
T 3kzh_A 157 FKDKTNFILDPVSAEKASWVKHLIKDFHTIKPNRHEAEILAGFPITDTDDLIKASNYFLGLGIKKVFISLDADGIFYNDG 236 (328)
T ss_dssp HTTTSEEEEECCSHHHHHTSTTTGGGCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHHTCCEEEEECGGGCEEEECS
T ss_pred hhcCCcEEEEeCCHHHHHHHHHHhcCCcEEeCCHHHHHHHHCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCEEEEeC
Confidence 888999999997532 1234578899999999999999999987777788899999999999999999999999999987
Q ss_pred CCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCcchhhhhcc
Q psy14735 250 DNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKETLPDNLFSLK 329 (340)
Q Consensus 250 ~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~~~l~~~~ 329 (340)
+ +.+++|+ ++++++||+||||+|.|||++++++ |+++++|+++|+++|+++|++.|+.+..|+++++++++.+..
T Consensus 237 ~--~~~~~~~-~~v~vvdttGAGDaf~ag~~~~l~~--g~~~~~a~~~A~a~aa~~v~~~G~~~~~~~~~~v~~~~~~~~ 311 (328)
T 3kzh_A 237 V--SCGKIKA-TEVDVKNVTGAGDSFVAGLGYGYMN--KMPIEDIVKFAMTMSNITISHEETIHPDMALDTVLAKLEKTT 311 (328)
T ss_dssp S--CEEEEEE-SSCCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHTSSSSSCTTCSHHHHHHHHHTCC
T ss_pred C--ceEEecC-CCcccCCCCChhHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhcCCCCCCCcCCHHHHHHHhhhcc
Confidence 6 6888999 8889999999999999999999999 999999999999999999999999989999999999998743
No 5
>3ikh_A Carbohydrate kinase; transferase,kinase,SAD,ribose,D-ribose metabolic process,ATP ribokinase, PFKB family,11206L1,PSI-II,nysgxrc; HET: ATP; 1.88A {Klebsiella pneumoniae subsp} PDB: 3i3y_A*
Probab=100.00 E-value=1e-50 Score=366.19 Aligned_cols=289 Identities=20% Similarity=0.250 Sum_probs=262.2
Q ss_pred CCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCC
Q psy14735 14 EADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSI 93 (340)
Q Consensus 14 ~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi 93 (340)
+++|+++|++++|+++.++++|.++++++.......+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .||
T Consensus 2 ~~~i~viG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~lG~~~~~i~~vG~D~~g~~i~~~l~~-~gv 80 (299)
T 3ikh_A 2 SLRVYVTGNITVDETWSIPDIPKKGASIHGVKVSQDIGGKGANQAIILSRCGIETRLIAATGNDSNGAWIRQQIKN-EPL 80 (299)
T ss_dssp CCCEEEECCCEEEEEEECSSCCCTTCEEECEEEEEEEECHHHHHHHHHHHTTCCEEEECCCCSSHHHHHHHHHGGG-SSC
T ss_pred CceEEEECceEEEEEEecCCCCCCCCeEEeeeeeeccCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHH-cCC
Confidence 4689999999999999999999999999988899999999999999999999999999999999999999999999 999
Q ss_pred cccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEEEEeCCCCHHHHHHHHHhchhcccC
Q psy14735 94 NTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVIMFQGETPWETTLYCLSKLHVSLES 173 (340)
Q Consensus 94 ~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~a~~~~~~ 173 (340)
+++++. ..+.+|+.++++++++|+|+++.+.+++..+++++++...+.+++++++++++..+.+...++++.+ ++.
T Consensus 81 ~~~~v~-~~~~~T~~~~~~~~~~g~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a---~~~ 156 (299)
T 3ikh_A 81 MLLPDG-HFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIPHMADAVAGDILLQQGNFSLDKTRALFQYA---RSR 156 (299)
T ss_dssp EEESSS-CCSSCCEEEEEECSSSCSCEEEEECHHHHHCCHHHHGGGGTTCCTTCEEEECSCSCHHHHHHHHHHH---HHT
T ss_pred ceeeeE-ecCCCCcEEEEEEcCCCCeEEEEeCCccccCCHHHHHHHHhhhccCCEEEECCCCCHHHHHHHHHHH---HHc
Confidence 999985 4567999999999999999988777777788888887655668899999999999999999999999 899
Q ss_pred CceEEEeCCCCCCCCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCceEEEecCCCc
Q psy14735 174 RAKIIVNPSPAVYPLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSGVVYATRDNPR 253 (340)
Q Consensus 174 ~~~v~~d~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~ 253 (340)
+.++++|+.+.. +....+++.+|++++|++|++.|++ .|++.++||+|++|+++++++ +
T Consensus 157 g~~v~~D~~~~~-~~~~~ll~~~dil~~N~~E~~~l~g------------------~g~~~vvvt~G~~G~~~~~~~--~ 215 (299)
T 3ikh_A 157 GMTTVFNPSPVN-PDFCHLWPLIDIAVVNESEAELLQP------------------YGVKTLVITQGAAGAWLVQEG--Q 215 (299)
T ss_dssp TCEEEECCCSCC-GGGGGCGGGCSEEEEEHHHHHHHCC------------------CSCSEEEEECGGGCEEEECSS--C
T ss_pred CCEEEEccccch-hhHHHHHhhCCEEEecHHHHHHHhc------------------CCCCEEEEEECCCceEEEeCC--c
Confidence 999999998653 3566889999999999999999876 589999999999999999876 6
Q ss_pred eEEEccCCCcCcccCCCcchHHHH-HHHHHHHcCCCCCHHH-HHHHHHHHHHHHhcccCCCCCCCCccCcchhhhhcccc
Q psy14735 254 LKTITVDHVEYPIESEGVGDCFVG-ALAYYLCYFPQLPLGE-IILRSCHVARQSLFNVGLQNSFPDKETLPDNLFSLKCE 331 (340)
Q Consensus 254 ~~~~p~~~~~~vvdttGaGDaF~a-g~~~~l~~~~g~~~~~-a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~~~l~~~~~~ 331 (340)
.+++|+ ++++++||+||||+|.| +|++++++ |+++++ |+++|+++|+.+|++.|+.+++|+++++++++.....+
T Consensus 216 ~~~~~~-~~v~vvDttGAGDaf~a~~~~~~l~~--g~~~~~~a~~~a~~~aa~~v~~~G~~~~~p~~~ev~~~l~~~~~~ 292 (299)
T 3ikh_A 216 RQFCPA-VPAEALDTTGAGDTFLAVMLASALLR--GVAPDALALAHASRAAAITVSRRGTLSAFPGSRELAALLTTDGAE 292 (299)
T ss_dssp EEEECC-CCCCCSCCTTHHHHHHHHHHHHHHHT--TSSSCHHHHHHHHHHHHHHHHSSSSTTTSCCHHHHHHHHC-----
T ss_pred eEEeCC-CCCccCCCCCchHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHhCCCcccccCCCHHHHHHHHHhcccc
Confidence 889999 88899999999999999 99999999 999999 99999999999999999998999999999999875543
No 6
>2rbc_A Sugar kinase, AGR_C_4560P; ribokinase family, ATP-binding site, structura genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.9e-49 Score=364.33 Aligned_cols=301 Identities=17% Similarity=0.198 Sum_probs=264.0
Q ss_pred CCCCCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhh
Q psy14735 11 LKDEADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKY 90 (340)
Q Consensus 11 ~~~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~ 90 (340)
.+++++|+++|++++|+++.++.+|.++++++.......+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++
T Consensus 26 ~~~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~- 104 (343)
T 2rbc_A 26 EPGGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDLSE- 104 (343)
T ss_dssp --CCCEEEEESCCEEEEEEECSSCCCSSSCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHH-
T ss_pred cccCCeEEEECcceEEEEeecCCCCCCCCeEeeeeeEEcCCcHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHH-
Confidence 3445689999999999999999999888888888889999999999999999999999999999999999999999999
Q ss_pred cCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEEEEeCCCCHHHHHHHHHhchhc
Q psy14735 91 NSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVIMFQGETPWETTLYCLSKLHVS 170 (340)
Q Consensus 91 ~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~a~~~ 170 (340)
.||+++++.+.++.+|+.++++++++|+|+++.+.+++..++++++.. +.+++++++++++..+ +...++++.+
T Consensus 105 ~GVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~~~~~~~~l~~--~~l~~~~~v~~~~~~~-~~~~~~~~~a--- 178 (343)
T 2rbc_A 105 SGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTP--EDIALFDAVLVDVRWP-ELALDVLTVA--- 178 (343)
T ss_dssp TTEECTTCEEETTCCCEEEEEEECTTSCEEEEEECCGGGGSSCCCCCH--HHHTTCSEEEECSSSH-HHHHHHHHHH---
T ss_pred cCCceeeEEEcCCCCCceEEEEECCCCCEEEEEcCCCcccCChhHhcH--hhhCCCCEEEEcCCCH-HHHHHHHHHH---
Confidence 999999998777779999999999899998876777655555555432 2367899999988765 6788889999
Q ss_pred ccCCceEEEeCCCCCCCCchh-hhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCC-CEEEEEecCCceEEEe
Q psy14735 171 LESRAKIIVNPSPAVYPLNPI-VMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKC-NTVIITLGGSGVVYAT 248 (340)
Q Consensus 171 ~~~~~~v~~d~~~~~~~~~~~-~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~ 248 (340)
++.+.++++||.+. ++.+.+ +++.+|++++|++|++.|++. +++.++++.|.++|+ +.|+||+|++|+++++
T Consensus 179 ~~~g~~v~~Dp~~~-~~~~~~~ll~~~dil~~N~~Ea~~l~g~-----~~~~~~~~~l~~~g~~~~VvvT~G~~G~~~~~ 252 (343)
T 2rbc_A 179 RALGKPAILDGDVA-PVETLEGLAPAATHIVFSEPAATRLTGL-----ETVKDMLPVLHARYPQTFIAVTAGPAGCWWTE 252 (343)
T ss_dssp HHTTCCEEEEECSC-CHHHHHHHGGGCSEEEEEHHHHHHHHCC-----SSHHHHHHHHHHHSTTSEEEEECGGGCEEEEC
T ss_pred HHCCCEEEEECCcc-ccccHHHHHhcCCEEEeCHHHHHHHcCC-----CCHHHHHHHHHHhCCCceEEEEECCcceEEEe
Confidence 88899999999764 334456 889999999999999999987 467788889999999 9999999999999987
Q ss_pred cCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCcchhhhh
Q psy14735 249 RDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKETLPDNLFS 327 (340)
Q Consensus 249 ~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~~~l~~ 327 (340)
+++.+.+++|+ ++++++||+||||+|.|+|++++++ |+++++|+++|+++|+.++++.|+.+.+|+++++++++.+
T Consensus 253 ~~~~~~~~~~~-~~v~vvDttGAGDaF~ag~~~~l~~--g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~ 328 (343)
T 2rbc_A 253 ADDPTVHFQTT-MQVEAVDTLAAGDIFHGTFALAMAE--GMQSRAAVRLSSVAAALKCTVFGGRIGAPTREETEEAMRQ 328 (343)
T ss_dssp TTCCCEEEECC-CCCCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHTSSSGGGGCCCHHHHHHHHHH
T ss_pred CCCceeEEecC-CCCccccCCChHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhCCCCCccCCCCHHHHHHHHHh
Confidence 64113778999 8889999999999999999999999 9999999999999999999999998889999999998865
No 7
>1vm7_A Ribokinase; TM0960, structural genomics, JCSG, protein struc initiative, PSI, joint center for structural genomics, TRAN; 2.15A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=4.7e-49 Score=357.18 Aligned_cols=297 Identities=28% Similarity=0.398 Sum_probs=262.9
Q ss_pred CCCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCc-eeEEEEecCChhhHHHHHHHhhhc
Q psy14735 13 DEADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRAS-VALISKLGNDKFGKSYLEELRKYN 91 (340)
Q Consensus 13 ~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~-v~~~~~vG~D~~g~~i~~~l~~~~ 91 (340)
+-++|+|+|++++|+++.++.+|.++++++.......+||++.|+|++|++||.+ +.++|.+|+|.+|+.+++.|++ .
T Consensus 13 ~~~~v~vvG~~~iD~~~~~~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~i~~vG~D~~G~~l~~~L~~-~ 91 (311)
T 1vm7_A 13 MFLVISVVGSSNIDIVLKVDHFTKPGETQKAIEMNVFPGGKGANQAVTVAKIGEKGCRFVTCIGNDDYSDLLIENYEK-L 91 (311)
T ss_dssp CCCCEEEECCCEEEEEEECSSCCCTTCEEECSEEEEEEECHHHHHHHHHHHHHSSCEEEEEEECSSHHHHHHHHHHHH-T
T ss_pred ccCCEEEECcceeeEEEecccCCCCCceEecCeeeecCCCHHHHHHHHHHHcCCCceEEEEEECCChHHHHHHHHHHH-C
Confidence 3579999999999999999999999999998889999999999999999999999 9999999999999999999999 9
Q ss_pred CCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEEEEeCCCCHHHHHHHHHhchhcc
Q psy14735 92 SINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVIMFQGETPWETTLYCLSKLHVSL 171 (340)
Q Consensus 92 gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~a~~~~ 171 (340)
|| ++.+.++.+|+.+++.++++|++++..+.++...+++++++ .+.++.++++++++..+.+....+ + +
T Consensus 92 gV---~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~---a---~ 160 (311)
T 1vm7_A 92 GI---TGYIRVSLPTGRAFIEVDKTGQNRIIIFPGANAELKKELID--WNTLSESDILLLQNEIPFETTLEC---A---K 160 (311)
T ss_dssp TE---EEEEECSSCCCEEEEEECTTSCEEEEEECGGGGGCCGGGCC--HHHHTTCSEEEECSSSCHHHHHHH---H---H
T ss_pred CC---EEEEcCCCCCeEEEEEECCCCCEEEEEecCccccCCHHHhC--hhhcccCCEEEEeCCCCHHHHHHH---H---H
Confidence 99 66666677999999999988999998888777778887765 234788999999988886655444 6 7
Q ss_pred cCCceEEEeCCCCCCCCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCceEEEecCC
Q psy14735 172 ESRAKIIVNPSPAVYPLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSGVVYATRDN 251 (340)
Q Consensus 172 ~~~~~v~~d~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~ 251 (340)
+.+.++++||.+. .+....+++.+|++++|++|++.|++.+..+.+++.++++.|.++|++.|+||+|++|+++++++
T Consensus 161 ~~~~~v~~Dp~~~-~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvT~G~~G~~~~~~~- 238 (311)
T 1vm7_A 161 RFNGIVIFDPAPA-QGINEEIFQYLDYLTPNEKEIEALSKDFFGEFLTVEKAAEKFLELGVKNVIVKLGDKGVLLVNKN- 238 (311)
T ss_dssp HCCSEEEECCCSC-TTCCGGGGGGCSEECCBHHHHHHHHHHHHSCCCCHHHHHHHHHHTTCSEEEEECGGGCEEEEETT-
T ss_pred HcCCEEEEeCcch-hhhhHHHHhhCCEEeCCHHHHHHHhCCCCCChhHHHHHHHHHHHcCCCEEEEEECCCCeEEEeCC-
Confidence 7789999999863 23556889999999999999999988644444678888999999999999999999999998876
Q ss_pred CceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCcchhhhh
Q psy14735 252 PRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKETLPDNLFS 327 (340)
Q Consensus 252 ~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~~~l~~ 327 (340)
+.+++|+ ++++++||+||||+|.|+|++++++ |+++++|+++|+++|+.++++.|+.+.+|+++++++++.+
T Consensus 239 -~~~~~~~-~~v~~vdttGAGDaf~a~~~~~l~~--g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~ 310 (311)
T 1vm7_A 239 -EKKHFPT-FKVKAVDTTAAGDVFNGAFAVALSE--GKNPEEAVIFGTAAAAISVTRLGAQSSIPAREEVEAFLKN 310 (311)
T ss_dssp -EEEEECC-CCCCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHTTSSSSGGGCCCHHHHHHHHHT
T ss_pred -ceEEecC-CCcccCCCCccHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHhCcCCccccCCCHHHHHHHHhc
Confidence 6788999 8889999999999999999999999 9999999999999999999999998889999999988753
No 8
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase, transferase; HET: RIB ADP; 1.98A {Mycobacterium tuberculosis} PDB: 3go7_A*
Probab=100.00 E-value=5.6e-49 Score=356.37 Aligned_cols=290 Identities=26% Similarity=0.342 Sum_probs=255.5
Q ss_pred CCCCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhc
Q psy14735 12 KDEADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYN 91 (340)
Q Consensus 12 ~~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~ 91 (340)
++|++|+++|++++|+++.++.+|.++++++.......+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .
T Consensus 17 ~mm~~i~viG~~~iD~~~~v~~~p~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~L~~-~ 95 (310)
T 3go6_A 17 PMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRA-N 95 (310)
T ss_dssp --CCEEEEECCCEEEEEEECSSCCCTTCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECSSHHHHHHHHHHHH-T
T ss_pred cccCCEEEECCceEEEEEecCCCCCCCCeEEecceeecCCCHHHHHHHHHHHCCCCeEEEEEECCCHHHHHHHHHHHH-c
Confidence 347899999999999999999999999999988999999999999999999999999999999999999999999999 9
Q ss_pred CCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEEEEeCCCCHHHHHHHHHhchhcc
Q psy14735 92 SINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVIMFQGETPWETTLYCLSKLHVSL 171 (340)
Q Consensus 92 gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~a~~~~ 171 (340)
||+++++... +.+|+.+++.++++|+++++.+.++...++ ++ .+.+++++++++++..+.+...++++.+ +
T Consensus 96 gV~~~~v~~~-~~~T~~~~~~~~~~g~~~~~~~~ga~~~l~--~~---~~~l~~~~~v~~~~~~~~~~~~~~~~~a---~ 166 (310)
T 3go6_A 96 AVGLDRTVTV-PGPSGTAIIVVDASAENTVLVAPGANAHLT--PV---PSAVANCDVLLTQLEIPVATALAAARAA---Q 166 (310)
T ss_dssp TCBCTTCEEC-SSCCEEEEEEECTTSCEEEEEECGGGGGCC--CC---TTTTTTCSEEEECSSSCHHHHHHHHHHH---H
T ss_pred CCccceeEec-CCCCCEEEEEEcCCCCEEEEecCChhhhHH--HH---HHHhhcCCEEEECCCCCHHHHHHHHHHH---H
Confidence 9999998654 569999999999999999988877766666 22 3457899999999999999999999999 9
Q ss_pred cCCceEEEeCCCCCC--CCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCceEEEec
Q psy14735 172 ESRAKIIVNPSPAVY--PLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSGVVYATR 249 (340)
Q Consensus 172 ~~~~~v~~d~~~~~~--~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~ 249 (340)
+.+.++++|+.+..+ +.+..+++.+|++++|++|++.|++. ++.++||+|++|++++++
T Consensus 167 ~~g~~v~~D~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~-------------------~~~vvvt~G~~Ga~~~~~ 227 (310)
T 3go6_A 167 SADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPSP-------------------PTHFVITLGVRGARYVGA 227 (310)
T ss_dssp HTTCEEEEECCSSSCCHHHHHHHHHHCSEEEEEHHHHHHSSSC-------------------CSEEEEECGGGCEEEEET
T ss_pred HcCCEEEEcCCccccchHHHHHHHhhCCEEEeCHHHHHHHhCC-------------------CCEEEEEECCCCEEEEEC
Confidence 999999999986542 23347899999999999999999863 789999999999999987
Q ss_pred CCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCC--CCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCcchhhhh
Q psy14735 250 DNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFP--QLPLGEIILRSCHVARQSLFNVGLQNSFPDKETLPDNLFS 327 (340)
Q Consensus 250 ~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~--g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~~~l~~ 327 (340)
+ +.+++|+ ++++++||+||||+|.|||+++|++.+ |+++++|+++|+++|+.+|++.|+.+++|++++++++|..
T Consensus 228 ~--~~~~~~~-~~v~vvdttGAGDaF~ag~~~~l~~~~~~g~~l~~a~~~A~~~aa~~v~~~G~~~~~p~~~ev~~~l~~ 304 (310)
T 3go6_A 228 D--GVFEVPA-PTVTPVDTAGAGDVFAGVLAANWPRNPGSPAERLRALRRACAAGALATLVSGVGDCAPAAAAIDAALRA 304 (310)
T ss_dssp T--EEEEECC-CCCCCSCCTTHHHHHHHHHHHHCCSSSCCHHHHHHHHHHHHHHHHHHTTSSCSTTCCCCHHHHHHHHHT
T ss_pred C--ceEEeCC-CCCCcCcCCCchHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHh
Confidence 6 7889999 889999999999999999999998721 4789999999999999999999999899999999999987
Q ss_pred cccccccc
Q psy14735 328 LKCELNTS 335 (340)
Q Consensus 328 ~~~~~~~~ 335 (340)
.++|+|
T Consensus 305 --~~~~~~ 310 (310)
T 3go6_A 305 --NRHNGS 310 (310)
T ss_dssp --C-----
T ss_pred --ccCCCC
Confidence 777775
No 9
>3iq0_A Putative ribokinase II; transferase,kinase,SAD,ribose, D-ribose metabolic process, PFKB family,11206G, PSI-II, NYSGXRC, structural genomics; HET: ATP; 1.79A {Escherichia coli O6} SCOP: c.72.1.0 PDB: 3k9e_A
Probab=100.00 E-value=5.9e-49 Score=359.52 Aligned_cols=302 Identities=18% Similarity=0.190 Sum_probs=250.1
Q ss_pred CCCCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhc
Q psy14735 12 KDEADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYN 91 (340)
Q Consensus 12 ~~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~ 91 (340)
|+|++|+++|++++|++...+ .++..........++||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .
T Consensus 1 m~m~~i~viG~~~~D~~~~~~---~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~-~ 76 (330)
T 3iq0_A 1 MSLSKVFTIGEILVEIMASKI---GQPFDQPGIWNGPYPSGAPAIFIDQVTRLGVPCGIISCVGNDGFGDINIHRLAA-D 76 (330)
T ss_dssp ---CEEEEESCCEEEEEEEEE---TCCSSSCEEEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHH-T
T ss_pred CCCCCEEEEcceeEEEeccCC---CCCccccccccCcCCCCHHHHHHHHHHHCCCcEEEEEEeCCChHHHHHHHHHHH-c
Confidence 457899999999999997522 222222222346789999999999999999999999999999999999999999 9
Q ss_pred CCcccceEeeCCCCCceEEEEEcCCCCeEEEEeC--CcCCCCCHHHHHHHHhhccCCcEEEEeCCCC-----HHHHHHHH
Q psy14735 92 SINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIP--GANTYLSASDIDAAKNLLLKAKVIMFQGETP-----WETTLYCL 164 (340)
Q Consensus 92 gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~-----~~~~~~~~ 164 (340)
||+++++.+.++.+|+.+++.++++|++++.+.. ++...++++++.. ..+++++++++++..+ .+...+++
T Consensus 77 gv~~~~v~~~~~~~T~~~~i~~~~~g~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~v~~sg~~~~~~~~~~~~~~~~ 154 (330)
T 3iq0_A 77 GVDIRGISVLPLEATGSAFVTYHNSGDRDFIFNIKNAACGKLSAQHVDE--NILKDCTHFHIMGSSLFSFHMVDAVKKAV 154 (330)
T ss_dssp TCBCTTEEEETTSCCEEEEEEECC---CEEEEECTTSGGGGCCGGGCCG--GGGTTEEEEEEEGGGCSSHHHHHHHHHHH
T ss_pred CCCeeeEEEcCCCCceEEEEEECCCCCeeEEEeccCChhhhCCHhhCCH--hHhccCCEEEEechhhcCcchHHHHHHHH
Confidence 9999999888888999999999989998544433 3455677776643 3578999999987543 35578888
Q ss_pred HhchhcccCCceEEEeCCCCC--C------CCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEE
Q psy14735 165 SKLHVSLESRAKIIVNPSPAV--Y------PLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVI 236 (340)
Q Consensus 165 ~~a~~~~~~~~~v~~d~~~~~--~------~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vv 236 (340)
+.+ ++++.++++||.... | +.+..+++.+|++++|++|++.|++. ++..++++.|+++|++.|+
T Consensus 155 ~~a---~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~~~~~~~~~l~~~g~~~vv 226 (330)
T 3iq0_A 155 TIV---KANGGVISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSPH-----STPERAIAGFLEEGVKEVI 226 (330)
T ss_dssp HHH---HHTTCEEEEECCCCGGGGGSHHHHHHHHHHHHTCSEECCBGGGTTTTCSC-----SSHHHHHHHHHHHTCSEEE
T ss_pred HHH---HHcCCEEEEcCCCCccccCcHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-----CCHHHHHHHHHHcCCCEEE
Confidence 888 889999999997542 2 23446789999999999999999987 5678888999999999999
Q ss_pred EEecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCC
Q psy14735 237 ITLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFP 316 (340)
Q Consensus 237 vt~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~ 316 (340)
||+|++|+++++++ +.+++|+ ++++++||+||||+|.|+|++++++ |+++++|+++|+++|+.+|++.|+.+++|
T Consensus 227 vT~G~~G~~~~~~~--~~~~~~~-~~v~vvdttGAGDaf~a~~~~~l~~--g~~~~~a~~~A~~~aa~~v~~~G~~~~~p 301 (330)
T 3iq0_A 227 VKRGNQGASYYSAN--EQFHVES-YPVEEVDPTGAGDCFGGAWIACRQL--GFDAHRALQYANACGALAVTRRGPMEGTS 301 (330)
T ss_dssp EECGGGCEEEECSS--CEEEECC-CCCCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHTTSCSSSTTCC
T ss_pred EEeCCCceEEEECC--ceEEecC-CCCccCCCCChHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHcCcCCCCCCC
Confidence 99999999999876 6889999 8889999999999999999999999 99999999999999999999999988899
Q ss_pred CccCcchhhhhccccc
Q psy14735 317 DKETLPDNLFSLKCEL 332 (340)
Q Consensus 317 ~~~~v~~~l~~~~~~~ 332 (340)
+++++++++.+...+.
T Consensus 302 ~~~ev~~~~~~~~~~i 317 (330)
T 3iq0_A 302 RLMEIETFIQRHDMSI 317 (330)
T ss_dssp CHHHHHHHHHHC----
T ss_pred CHHHHHHHHHhcccch
Confidence 9999999998765543
No 10
>3vas_A Putative adenosine kinase; ribokinase, enzyme, transferase; HET: ADN; 2.26A {Schistosoma mansoni} PDB: 4dc3_A* 3vaq_A* 3uq6_A* 3uq9_A*
Probab=100.00 E-value=4e-49 Score=365.75 Aligned_cols=301 Identities=18% Similarity=0.199 Sum_probs=264.1
Q ss_pred cCCCCCcEEEEcccccceeeecCC--------------------CCCCCCeeecCceeeecCChHHHHHHHHHhc---CC
Q psy14735 10 NLKDEADIVVVGSCLVEFITYVQT--------------------LPKPEETVKGYHFEQRFSGKGANQCVAAAKL---RA 66 (340)
Q Consensus 10 ~~~~~~~I~viG~~~iD~~~~~~~--------------------~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l---G~ 66 (340)
+.|++.+|+++|++++|+++.+++ +|.+++++........+||++.|+|+++++| |.
T Consensus 20 ~~m~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~P~~ge~~~~~~~~~~~GG~~~N~A~~la~L~~~G~ 99 (370)
T 3vas_A 20 HDLSEGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPF 99 (370)
T ss_dssp -CCCTTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTHHHHHHTTSSSCEEEEECHHHHHHHHHHHHHCCTT
T ss_pred cccCCccEEEECCcceeEEEecCHHHHHHcCCCCCceEEccHHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhcCCCC
Confidence 456678999999999999999994 6666666666788999999999999999999 99
Q ss_pred ceeEEEEecCChhhHHHHHHHhhhcCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHH--HHhhcc
Q psy14735 67 SVALISKLGNDKFGKSYLEELRKYNSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDA--AKNLLL 144 (340)
Q Consensus 67 ~v~~~~~vG~D~~g~~i~~~l~~~~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~--~~~~~~ 144 (340)
++.++|.+|+|.+|+.+++.|++ .||+++++....+.+|+.++++++ +|+|+++.+.+++..+++++++. ..+.++
T Consensus 100 ~~~~ig~vG~D~~G~~~~~~L~~-~GV~~~~~~~~~~~~Tg~~~i~v~-~g~rt~~~~~ga~~~l~~~~~~~~~~~~~~~ 177 (370)
T 3vas_A 100 VCSYVGCIGADIQGKYIKNDCSA-LDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDLSLAHIEQPHVWSLVE 177 (370)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHH-TTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHHHHTSHHHHHHHH
T ss_pred cEEEEEEEcCChhHHHHHHHHHH-cCCcccccccCCCCCceEEEEEEe-CCceeEEEccchhhhCCHHHcCchhhHHHHh
Confidence 99999999999999999999999 999999987656779999999998 89999988888888899888754 234578
Q ss_pred CCcEEEEeCCC---CHHHHHHHHHhchhcccCCceEEEeCCCCCC-----CCchhhhhcCcEEEeCHHHHHHhhcCCCCC
Q psy14735 145 KAKVIMFQGET---PWETTLYCLSKLHVSLESRAKIIVNPSPAVY-----PLNPIVMILADIICINEQEAEIITDMKINN 216 (340)
Q Consensus 145 ~~~~v~i~~~~---~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~-----~~~~~~l~~~dil~~n~~E~~~l~~~~~~~ 216 (340)
+++++++++.. +.+.+.++++.+ ++++.++++|++...+ +.+.++++.+|++++|++|++.|++....+
T Consensus 178 ~~~~v~~~g~~~~~~~~~~~~~~~~a---~~~g~~v~ld~~~~~~~~~~~~~l~~ll~~~dil~~N~~Ea~~l~g~~~~~ 254 (370)
T 3vas_A 178 KAQVYYIAGFVINTCYEGMLKIAKHS---LENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLL 254 (370)
T ss_dssp HCSEEEEEGGGHHHHHHHHHHHHHHH---HHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCC
T ss_pred hCCEEEEEeeeccCCHHHHHHHHHHH---HHcCCEEEEECCcHHHHHHHHHHHHHHHhhCCEEEcCHHHHHHHhcccCCC
Confidence 89999998754 457788999999 8999999999985432 345688999999999999999999876555
Q ss_pred hhhHHHHHHHHHhc-------CCCEEEEEecCCceEEEe--cCCCceEEEccCCCc---CcccCCCcchHHHHHHHHHHH
Q psy14735 217 EEDLADCMEKLLDM-------KCNTVIITLGGSGVVYAT--RDNPRLKTITVDHVE---YPIESEGVGDCFVGALAYYLC 284 (340)
Q Consensus 217 ~~~~~~~~~~l~~~-------g~~~vvvt~G~~G~~~~~--~~~~~~~~~p~~~~~---~vvdttGaGDaF~ag~~~~l~ 284 (340)
.+++.++++.|.++ +++.||||+|++|+++++ .+ +.+++|+ +++ +++||+||||+|.|||+++|+
T Consensus 255 ~~~~~~~~~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~--~~~~~~~-~~v~~~~vvDttGAGDaF~ag~l~~l~ 331 (370)
T 3vas_A 255 EDTVHATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDS--EIHQFMV-EQFKDDQIIDTNGAGDAFAAGFIADYI 331 (370)
T ss_dssp SSHHHHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEETTCS--SCEEECC-CCCCTTTCSCCTTHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHhhcccccccCCCEEEEecCCCceEEEEcCCC--eEEEEec-ccccCCCcCCCCChHHHHHHHHHHHHH
Confidence 67889999999985 899999999999999998 55 6888998 776 899999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCcc
Q psy14735 285 YFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKETLP 322 (340)
Q Consensus 285 ~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~ 322 (340)
+ |+++++|+++|+++|+.+|++.|+. +|+++++.
T Consensus 332 ~--g~~l~~a~~~A~aaAa~~v~~~G~~--~p~~~~~~ 365 (370)
T 3vas_A 332 R--GKPMITSLHAAVKAAAYIICRSGFS--LGSRDSYS 365 (370)
T ss_dssp T--TCCHHHHHHHHHHHHHHHHTSSSSC--CCCGGGGC
T ss_pred C--CCCHHHHHHHHHHHHHHHHcccCCc--CCCCccce
Confidence 9 9999999999999999999999985 68888776
No 11
>2nwh_A AGR_C_3442P, carbohydrate kinase; structural genomics, APC6199, PSI-2, PR structure initiative 2; 1.86A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.9e-48 Score=354.19 Aligned_cols=300 Identities=15% Similarity=0.146 Sum_probs=257.6
Q ss_pred CCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCC
Q psy14735 14 EADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSI 93 (340)
Q Consensus 14 ~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi 93 (340)
|++|+++|++++|++..+++.|.++++.+.. ....+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .||
T Consensus 3 m~~i~viG~~~~D~~~~~~~~~~~~~~~~~~-~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~-~gV 80 (317)
T 2nwh_A 3 MKKILVLGGAHIDRRGMIETETAPGASNPGS-WMEEAGGGGFNAARNLSRLGFEVRIIAPRGGDVTGEVVAEAARQ-AGV 80 (317)
T ss_dssp CCEEEEESCCEEEEEEEESSSCCTTSCCCEE-EEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHH-TTC
T ss_pred CCeEEEECchheEEeeccCCCCCCCCCceEe-EEEeCCcHHHHHHHHHHhcCCCcEEEEeecCCchHHHHHHHHHH-cCC
Confidence 4689999999999999999888888877764 78899999999999999999999999999999999999999999 999
Q ss_pred cccceEeeCCCCCceEEEEEcCCCCeEEEEeCC-cCCCCCHHHHHHHH--hhccCCcEEEEeCCCCHHHHHHHHHhchhc
Q psy14735 94 NTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPG-ANTYLSASDIDAAK--NLLLKAKVIMFQGETPWETTLYCLSKLHVS 170 (340)
Q Consensus 94 ~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~-~~~~~~~~~i~~~~--~~~~~~~~v~i~~~~~~~~~~~~~~~a~~~ 170 (340)
++++ ...++.+|+.++++++++|++++.+... ....+++++++... +.++.++++++++..+.+....+++.+
T Consensus 81 ~~~~-~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a--- 156 (317)
T 2nwh_A 81 EDTP-FTFLDRRTPSYTAILERDGNLVIALADMDLYKLFTPRRLKVRAVREAIIASDFLLCDANLPEDTLTALGLIA--- 156 (317)
T ss_dssp EECC-EEETTSCCCEEEEEECTTSCEEEEEEECGGGGGCCHHHHTSHHHHHHHHHCSEEEEETTSCHHHHHHHHHHH---
T ss_pred CCCC-cccCCCCCceEEEEEcCCCCEEEEEcchHHHhhCCHHHhhhhhhhhHhccCCEEEEeCCCCHHHHHHHHHHH---
Confidence 9998 4555679999999999899998765553 34568887765433 457789999999888889999999999
Q ss_pred ccCCceEEEeCCCCC-CCCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCceEEEec
Q psy14735 171 LESRAKIIVNPSPAV-YPLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSGVVYATR 249 (340)
Q Consensus 171 ~~~~~~v~~d~~~~~-~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~ 249 (340)
++.+.++++||.+.. .+.+..+++.+|++++|++|++.|++. +.+++.++++.|+++|++.|+||+|++|+++++.
T Consensus 157 ~~~g~~v~~Dp~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~---~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~ 233 (317)
T 2nwh_A 157 RACEKPLAAIAISPAKAVKLKAALGDIDILFMNEAEARALTGE---TAENVRDWPNILRKAGLSGGVVTRGASEVVAFNG 233 (317)
T ss_dssp HHTTCCEEEECCSHHHHGGGTTTGGGCSEEEEEHHHHHHHHC--------CTTHHHHHHHTTCCCEEEEETTTEEEEECS
T ss_pred HhcCCeEEEeCCCHHHHHHHHHHhhhCeEecCCHHHHHHHhCC---ChhHHHHHHHHHHHcCCCEEEEEECCCcEEEEcC
Confidence 889999999997531 123457789999999999999999986 2244556788888899999999999999999876
Q ss_pred CCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCcchhhh
Q psy14735 250 DNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKETLPDNLF 326 (340)
Q Consensus 250 ~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~~~l~ 326 (340)
++ +.+++|+ ++++++||+||||+|.|+|++++++ |+++++|+++|+++|+.++++.|+.+..|++++++++..
T Consensus 234 ~~-~~~~~~~-~~v~~vdt~GAGDaf~a~~~~~l~~--g~~~~~a~~~A~~~aa~~v~~~G~~~~~~~~~~v~~~~~ 306 (317)
T 2nwh_A 234 TE-KAILHPP-LIREVKDVTGAGDAMASGYLAAIAE--GKTIREALRQGAAAAAITVQSSFATSQDLSKDSVEAMLG 306 (317)
T ss_dssp SC-EEEECCC-CSSSCSCCCCSSHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHSSTTCCGGGCCHHHHHHHHT
T ss_pred CC-ceEEeCC-CCccccCCCChhHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHhHhh
Confidence 53 4678899 8889999999999999999999999 999999999999999999999999988899999988543
No 12
>2c4e_A Sugar kinase MJ0406; transferase, nucleoside kinase, hyperthermophIle, ribokinase ribokinase fold; 1.70A {Methanococcus jannaschii} PDB: 2c49_A
Probab=100.00 E-value=5.4e-49 Score=355.49 Aligned_cols=290 Identities=19% Similarity=0.248 Sum_probs=253.2
Q ss_pred CCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCC
Q psy14735 14 EADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSI 93 (340)
Q Consensus 14 ~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi 93 (340)
|++|+++|++++|+++.++++|.+++.++.......+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .||
T Consensus 5 m~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~-~gv 83 (302)
T 2c4e_A 5 MEKITCVGHTALDYIFNVEKFPEPNTSIQIPSARKYYGGAAANTAVGIKKLGVNSELLSCVGYDFKNSGYERYLKN-LDI 83 (302)
T ss_dssp EEEEEEESCCEEEEEEECSSCCCTTCCCCCSCEEEEEECHHHHHHHHHHHTTCEEEEECEECTTTTTSHHHHHHHH-TTC
T ss_pred cCcEEEECceeEEEEecccccCCCCceeeecceeecCCCHHHHHHHHHHHCCCceEEEEEEeCCCchHHHHHHHHH-cCC
Confidence 4589999999999999999999999888888899999999999999999999999999999999999999999999 999
Q ss_pred cccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEEEEeCCCCHHHHHHHHHhchhcccC
Q psy14735 94 NTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVIMFQGETPWETTLYCLSKLHVSLES 173 (340)
Q Consensus 94 ~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~a~~~~~~ 173 (340)
+++++...++.+|+.+++.++++|+++++.+.+++..+++++++. ++++++++++..+ +...++++.+ +++
T Consensus 84 ~~~~~~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~-~~~~~~~~~a---~~~ 154 (302)
T 2c4e_A 84 NISKLYYSEEEETPKAWIFTDKDNNQITFFLWGAAKHYKELNPPN-----FNTEIVHIATGDP-EFNLKCAKKA---YGN 154 (302)
T ss_dssp BCTTCEECSSSCCCEEEEEECSSCCEECCEECGGGGGGGGCCCCC-----CCEEEEEECSSCH-HHHHHHHHHH---BTT
T ss_pred cccceEeeCCCCCceEEEEECCCCCEEEEEeCChhhhCCHhhcCc-----ccCCEEEEeCCCc-HHHHHHHHHH---Hhc
Confidence 999887766778999999998889998877776665565554331 5789999988665 8889999999 888
Q ss_pred CceEEEeCCCCCC----CCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCceEEEec
Q psy14735 174 RAKIIVNPSPAVY----PLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSGVVYATR 249 (340)
Q Consensus 174 ~~~v~~d~~~~~~----~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~ 249 (340)
+ ++++|+....+ +.+.++++++|++++|++|++.|++....+ +. .|+++ ++.|+||+|++|++++++
T Consensus 155 g-~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~-----~~--~l~~~-~~~vvvt~G~~G~~~~~~ 225 (302)
T 2c4e_A 155 N-LVSFDPGQDLPQYSKEMLLEIIEHTNFLFMNKHEFERASNLLNFE-----ID--DYLER-VDALIVTKGSKGSVIYTK 225 (302)
T ss_dssp B-EEEECCGGGGGGCCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC-----HH--HHHTT-CSEEEEECGGGCEEEECS
T ss_pred C-CEEEeCchhhhhhhHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcc-----HH--HHHhc-CCEEEEEECCCceEEEeC
Confidence 9 99999985321 234567899999999999999998753221 11 57777 899999999999999977
Q ss_pred CCCceEEEccCCCcC-cccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCcchhhhh
Q psy14735 250 DNPRLKTITVDHVEY-PIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKETLPDNLFS 327 (340)
Q Consensus 250 ~~~~~~~~p~~~~~~-vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~~~l~~ 327 (340)
+ +.+++|+ ++++ ++||+||||+|.|||++++++ |+++++|+++|+++|+.++++.|+.+.+|+++++++++.+
T Consensus 226 ~--~~~~~~~-~~v~~~vdt~GAGDaf~a~~~~~l~~--g~~~~~a~~~a~~~aa~~~~~~G~~~~~p~~~ev~~~~~~ 299 (302)
T 2c4e_A 226 D--KKIEIPC-IKAGKVIDPTGAGDSYRAGFLSAYVK--GYDLEKCGLIGAATASFVVEAKGCQTNLPTWDKVVERLEK 299 (302)
T ss_dssp S--CEEEECC-CCCSCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHTTSSSSSTTCCCHHHHHHHHHH
T ss_pred C--cEEEeCC-ccCCcCCcCCCchHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHccccccccCCCHHHHHHHHHh
Confidence 6 6888999 8888 999999999999999999999 9999999999999999999999998889999999998864
No 13
>3ljs_A Fructokinase; fructokianse, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.97A {Xylella fastidiosa TEMECULA1} SCOP: c.72.1.0 PDB: 3lki_A*
Probab=100.00 E-value=6.8e-49 Score=360.33 Aligned_cols=299 Identities=16% Similarity=0.183 Sum_probs=242.6
Q ss_pred CCCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcC
Q psy14735 13 DEADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNS 92 (340)
Q Consensus 13 ~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~g 92 (340)
++++|+++|++++|++...+..|.. .......+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .|
T Consensus 3 ~~~~v~viG~~~iD~~~~~~~~~~~-----~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~l~~~l~~-~g 76 (338)
T 3ljs_A 3 LKKTILCFGEALIDMLAQPLVKKGM-----PRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAE-AG 76 (338)
T ss_dssp -CCEEEEESCCEEEEEECCCSSTTS-----CCCEEEEEECHHHHHHHHHHHHTCCEEEESEEESSHHHHHHHHHHHH-HT
T ss_pred CCCCEEEEChhhhheeccCCCCccc-----hhceeecCCChHHHHHHHHHhCCCCEEEEeeccCCHHHHHHHHHHHH-cC
Confidence 4579999999999999988776543 45778899999999999999999999999999999999999999999 99
Q ss_pred CcccceEeeCCCCCceEEEEEcCCCCeEEEEeC--CcCCCCCHHHHHHHHhhccCCcEEEEeCCC-----CHHHHHHHHH
Q psy14735 93 INTKYIWLLQDVTTGVCSKVISNKGTHQTNIIP--GANTYLSASDIDAAKNLLLKAKVIMFQGET-----PWETTLYCLS 165 (340)
Q Consensus 93 i~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~-----~~~~~~~~~~ 165 (340)
|+++++.+..+.+|+.+++.++++|+|++.++. +++..+++++++. ..+++++++++++.. +.+.+.++++
T Consensus 77 V~~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 154 (338)
T 3ljs_A 77 VVTDGIVRTSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQD--ASFSDALIFHACSNSMTDADIAEVTFEGMR 154 (338)
T ss_dssp CBCTTCEEESSSCCCEEEEECCSTTCCEEEEECSSCGGGGCCGGGCCH--HHHHTEEEEEEEGGGGSSHHHHHHHHHHHH
T ss_pred CCceeEEEcCCCCceEEEEEECCCCCeEEEEeCCCChhHhCCHhhcCH--hHhcCCCEEEECChHhcCchHHHHHHHHHH
Confidence 999999887788999999999989999876664 5666788877764 247789999997632 3467888899
Q ss_pred hchhcccCCceEEEeCCCC--C-------CCCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEE
Q psy14735 166 KLHVSLESRAKIIVNPSPA--V-------YPLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVI 236 (340)
Q Consensus 166 ~a~~~~~~~~~v~~d~~~~--~-------~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vv 236 (340)
.+ ++++.++++||... + .+.+..+++.+|++++|++|++.|++....+. .++++.|++.|++.|+
T Consensus 155 ~a---~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~---~~~~~~l~~~g~~~vv 228 (338)
T 3ljs_A 155 RA---QAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADA---NAVIQQLWQGRAQLLL 228 (338)
T ss_dssp HH---HHTTCEEEEECCCCGGGSCTTCCTHHHHHHHHHTCSEEEEEHHHHHHHHHHHTSCH---HHHHHHHTTTTCCEEE
T ss_pred HH---HHcCCEEEEECCCChhhcCCHHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCChhH---HHHHHHHHhcCCCEEE
Confidence 98 88999999999532 1 12355678999999999999999998632111 2378888889999999
Q ss_pred EEecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCC--------------CCHHHHHHHHHHHH
Q psy14735 237 ITLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQ--------------LPLGEIILRSCHVA 302 (340)
Q Consensus 237 vt~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g--------------~~~~~a~~~a~~~A 302 (340)
||+|++|+++++++ +.+++|+ ++++++||+||||+|.|+|+++|++ | +++++|+++|+++|
T Consensus 229 vT~G~~G~~~~~~~--~~~~~~~-~~v~vvDttGAGDaF~a~~~~~l~~--g~~~~~~~~~~~~~~~~l~~al~~A~~~a 303 (338)
T 3ljs_A 229 VTDAAGPVHWYTRT--AGGEVPT-FRVQVQDSNAAGDAFVGGMLYTFAQ--QFDDAAALIDFCHDPESIVSTLRFAAAVG 303 (338)
T ss_dssp EEETTEEEEEEESS--CEEEECC------------CHHHHHHHHHHHHH--HCSSTHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred EeeCCCceEEEECC--ceEEeCC-CCCccCCCCCccHHHHHHHHHHHHh--CCCcccchhccccChHHHHHHHHHHHHHH
Confidence 99999999999886 6889999 8899999999999999999999999 8 89999999999999
Q ss_pred HHHhcccCCCCCCCCccCcchhhhhccc
Q psy14735 303 RQSLFNVGLQNSFPDKETLPDNLFSLKC 330 (340)
Q Consensus 303 a~~~~~~g~~~~~~~~~~v~~~l~~~~~ 330 (340)
+++|++.|+.+++|+++++++++.++..
T Consensus 304 a~~v~~~Ga~~~~p~~~ev~~~~~~~~~ 331 (338)
T 3ljs_A 304 ALAVTRQGAFTAMPMLSEVLSLIQEQSE 331 (338)
T ss_dssp GGGC----CCCCTTHHHHHHHHHHHHHC
T ss_pred HHHhCCCCCCCCCCCHHHHHHHHhhhcc
Confidence 9999999999999999999999987544
No 14
>3pl2_A Sugar kinase, ribokinase family; PFKB PFAM motif, inositol phosphate metabolism, ribokinase-L structural genomics; HET: MSE CIT; 1.89A {Corynebacterium glutamicum} SCOP: c.72.1.0
Probab=100.00 E-value=1.1e-47 Score=349.60 Aligned_cols=299 Identities=20% Similarity=0.254 Sum_probs=251.0
Q ss_pred cccCCCCCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHH
Q psy14735 8 VANLKDEADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEEL 87 (340)
Q Consensus 8 ~~~~~~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l 87 (340)
|.++|++++|+++|++++|++...+..|.. +.......+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|
T Consensus 2 m~~~~~~~~v~~iG~~~~D~~~~~~~~p~~----~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l 77 (319)
T 3pl2_A 2 MTNLTSTHEVLAIGRLGVDIYPLQSGVGLA----DVQSFGKYLGGSAANVSVAAARHGHNSALLSRVGNDPFGEYLLAEL 77 (319)
T ss_dssp -----CCCSEEEESCCEEEECBSSSSCCGG----GCCCBCCEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHH
T ss_pred ccccccCCCEEEEChhheeeecccCCCCcc----ccceeeecCCCcHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHH
Confidence 556777889999999999998866555432 3456778899999999999999999999999999999999999999
Q ss_pred hhhcCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCC--c-CCCCCHHHHHHHHhhccCCcEEEEeCCC-----CHHH
Q psy14735 88 RKYNSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPG--A-NTYLSASDIDAAKNLLLKAKVIMFQGET-----PWET 159 (340)
Q Consensus 88 ~~~~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~--~-~~~~~~~~i~~~~~~~~~~~~v~i~~~~-----~~~~ 159 (340)
++ .||+++++.+.++.+|+.+++.++++|++++.++.+ + +..+++++++. +.+++++++++++.. +.+.
T Consensus 78 ~~-~gv~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~ 154 (319)
T 3pl2_A 78 ER-LGVDNQYVATDQTFKTPVTFCEIFPPDDFPLYFYREPKAPDLNIESADVSL--DDVREADILWFTLTGFSEEPSRGT 154 (319)
T ss_dssp HH-TTEECTTEEEESSSCCCEEEECCBTTTBCCEEEECCSCCGGGGCCGGGSCH--HHHHHCSEEEEEGGGGSSTTHHHH
T ss_pred HH-cCCccccEEecCCCCceEEEEEEcCCCCeeEEEecCCCcccccCChhhCCH--HHhccCCEEEEecccccCchhHHH
Confidence 99 999999998888889999998888888887776643 3 55777777653 347789999998642 2345
Q ss_pred HHHHHHhchhcccCCceEEEeCCCC--CC-------CCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhc
Q psy14735 160 TLYCLSKLHVSLESRAKIIVNPSPA--VY-------PLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDM 230 (340)
Q Consensus 160 ~~~~~~~a~~~~~~~~~v~~d~~~~--~~-------~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~ 230 (340)
...+++.+ ++ +.++++|+... .| +.+..+++++|++++|++|++.|+|. ++..++++.|+++
T Consensus 155 ~~~~~~~~---~~-~~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~~~~~~~~~l~~~ 225 (319)
T 3pl2_A 155 HREILTTR---AN-RRHTIFDLDYRPMFWESPEEATKQAEWALQHSTVAVGNKEECEIAVGE-----TEPERAGRALLER 225 (319)
T ss_dssp HHHHHHHH---TT-CSCEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEECHHHHHHHHSC-----CSHHHHHHHHHHT
T ss_pred HHHHHHHH---HH-CCcEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEEcCHHHHHHHcCC-----CCHHHHHHHHHhc
Confidence 66667776 55 56789998632 22 23457889999999999999999997 4678888999999
Q ss_pred CCCEEEEEecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccC
Q psy14735 231 KCNTVIITLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVG 310 (340)
Q Consensus 231 g~~~vvvt~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g 310 (340)
|++.++||+|++|+++++++ +.+++|+ ++++++||+||||+|.|+|++++++ |+++++|+++|+++|++++++.|
T Consensus 226 g~~~vvvt~G~~G~~~~~~~--~~~~~~~-~~v~vvdttGAGDaf~a~~~~~l~~--g~~~~~a~~~A~~~aa~~v~~~G 300 (319)
T 3pl2_A 226 GVELAIVKQGPKGVMAMTKD--ETVEVPP-FFVDVINGLGAGDAFGGALCHGLLS--EWPLEKVLRFANTAGALVASRLE 300 (319)
T ss_dssp TCSEEEEEEETTEEEEECSS--CEEEECC-CCCCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHTSSC
T ss_pred CCCEEEEEECCCCeEEEECC--ceEEeCC-cccCCCCCcCchHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999876 6889999 8899999999999999999999999 99999999999999999999999
Q ss_pred CCCCCCCccCcchhhhh
Q psy14735 311 LQNSFPDKETLPDNLFS 327 (340)
Q Consensus 311 ~~~~~~~~~~v~~~l~~ 327 (340)
+..++|+++++++++.+
T Consensus 301 ~~~~~p~~~ev~~~l~~ 317 (319)
T 3pl2_A 301 CSTAMPTTDEVEASLNQ 317 (319)
T ss_dssp SGGGCCCHHHHHHHCC-
T ss_pred CcCCCCCHHHHHHHHhc
Confidence 98889999999998854
No 15
>3h49_A Ribokinase; transferase,PFKB family,sugar kinase YDJH, NYSGXRC,11206A,PSI2,, structural genomics, protein structure initiative; 1.80A {Escherichia coli k-12} PDB: 3in1_A*
Probab=100.00 E-value=2.4e-47 Score=348.17 Aligned_cols=305 Identities=18% Similarity=0.196 Sum_probs=245.3
Q ss_pred CCCCCcEEEEcccccceeeecCC-CCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhh
Q psy14735 11 LKDEADIVVVGSCLVEFITYVQT-LPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRK 89 (340)
Q Consensus 11 ~~~~~~I~viG~~~iD~~~~~~~-~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~ 89 (340)
.|++++|+++|++++|++..... .+.....+........+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++
T Consensus 2 ~m~~~~v~~iG~~~~D~~~~~~~~~~~~~~~~p~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~ 81 (325)
T 3h49_A 2 SLDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRK 81 (325)
T ss_dssp ---CEEEEEESCCEEEEEECSCCGGGGGSSCCCCSCCCCEEESHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHH
T ss_pred CCCCCeEEEEChhhheeeccCCCCccccccccchheeEEccCcHHHHHHHHHHHCCCCeEEEEEECCChHHHHHHHHHHH
Confidence 46678999999999999753211 00111112223567889999999999999999999999999999999999999999
Q ss_pred hcCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCc-CCCCCHHHHHHHHhhccCCcEEEEeCCC-----CHHHHHHH
Q psy14735 90 YNSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGA-NTYLSASDIDAAKNLLLKAKVIMFQGET-----PWETTLYC 163 (340)
Q Consensus 90 ~~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~v~i~~~~-----~~~~~~~~ 163 (340)
.||+++++.+.++.+|+.++++++++|+|+++...+. ...+++++++. +.+++++++++++.. +.+.+.++
T Consensus 82 -~gV~~~~v~~~~~~~T~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 158 (325)
T 3h49_A 82 -ENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDF--ARFSQAKLLSLASIFNSPLLDGKALTEI 158 (325)
T ss_dssp -HTCBCSSCEEETTSCCCEEEEEECTTSCEEEECCTTSHHHHCCGGGCCG--GGGGGCSEEEEEEETTSTTSCHHHHHHH
T ss_pred -cCCceeeEEecCCCCCceEEEEECCCCceeEEeccCcccccCChhhcCh--hhhccCCEEEEecccCCcccCHHHHHHH
Confidence 9999999988778899999999999999988766543 34455555542 347889999998632 35778899
Q ss_pred HHhchhcccCCceEEEe-CCCCCCCC---chhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEe
Q psy14735 164 LSKLHVSLESRAKIIVN-PSPAVYPL---NPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITL 239 (340)
Q Consensus 164 ~~~a~~~~~~~~~v~~d-~~~~~~~~---~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~ 239 (340)
++.+ ++++..++.+ +++..|+. +.++++.+|++++|++|++.|++. ++..++++.|.++|++.|+||+
T Consensus 159 ~~~a---~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~~~~~~~~~l~~~g~~~vvvt~ 230 (325)
T 3h49_A 159 FTQA---KARQMIICADMIKPRLNETLDDICEALSYVDYLFPNFAEAKLLTGK-----ETLDEIADCFLACGVKTVVIKT 230 (325)
T ss_dssp HHHH---HHTTCEEEEEECCCSSCCCHHHHHHHHTTCSEEECBHHHHHHHHTC-----SSHHHHHHHHHTTTCSEEEEEC
T ss_pred HHHH---HhcCCEEEecCCchhhhhHHHHHHHHHhhCCEEecCHHHHHHHhCC-----CCHHHHHHHHHHcCCCEEEEEe
Confidence 9999 8888544432 45555533 346789999999999999999987 4677888889989999999999
Q ss_pred cCCceEEEecCCCceEEEccCCCc-CcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCc
Q psy14735 240 GGSGVVYATRDNPRLKTITVDHVE-YPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDK 318 (340)
Q Consensus 240 G~~G~~~~~~~~~~~~~~p~~~~~-~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~ 318 (340)
|++|+++++++ +.+++|+ +++ +++||+||||+|.|||++++++ |+++++|+++|+++|+++|++.|+.+++|++
T Consensus 231 G~~G~~~~~~~--~~~~~~~-~~~~~vvDttGAGDaf~ag~~~~l~~--g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~ 305 (325)
T 3h49_A 231 GKDGCFIKRGD--MTMKVPA-VAGITAIDTIGAGDNFASGFIAALLE--GKNLRECARFANATAAISVLSVGATTGVKNR 305 (325)
T ss_dssp TTSCEEEEETT--EEEEECC-CSSCCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHTSSSSSSSCSSS
T ss_pred CCCCeEEEECC--eEEEecC-cCCCCCcCCCChhHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHcccCCCCCCCCH
Confidence 99999999876 6888998 765 8999999999999999999999 9999999999999999999999999999999
Q ss_pred cCcchhhhhcccc
Q psy14735 319 ETLPDNLFSLKCE 331 (340)
Q Consensus 319 ~~v~~~l~~~~~~ 331 (340)
+++++++.+.+.+
T Consensus 306 ~ev~~~l~~~~~~ 318 (325)
T 3h49_A 306 KLVEQLLEEYEGE 318 (325)
T ss_dssp HHHHTC-------
T ss_pred HHHHHHHHhccCC
Confidence 9999999776544
No 16
>3ktn_A Carbohydrate kinase, PFKB family; PFKB family,ribokianse,2-keto-3-deoxygluconate kinase,PSI-II, NYSGXRC,, structural genomics; 2.26A {Enterococcus faecalis}
Probab=100.00 E-value=7.3e-48 Score=354.57 Aligned_cols=302 Identities=14% Similarity=0.138 Sum_probs=257.1
Q ss_pred CCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCC
Q psy14735 14 EADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSI 93 (340)
Q Consensus 14 ~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi 93 (340)
|++|+++|++++|++. |.+++..+.......+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .||
T Consensus 2 ~~~v~viG~~~~D~~~-----~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~g~~i~~~l~~-~gv 75 (346)
T 3ktn_A 2 SLKIAAFGEVMLRFTP-----PEYLMLEQTEQLRMNFVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRK-LGI 75 (346)
T ss_dssp CCEEEEECCCEEEEEC-----STTCCTTTCSCCEEEEECHHHHHHHHHHHTTCEEEEEEEECSSHHHHHHHHHHHH-TTC
T ss_pred CCcEEEeChhhhhhcC-----CCCCcccccceeEEeccCHHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHH-cCC
Confidence 5789999999999984 4456677778899999999999999999999999999999999999999999999 999
Q ss_pred cccceEeeCCCCCceEEEEEcCCCCeEEEEe-C---CcCCCCCHHHHHHHHhhccCCcEEEEeCCCC------HHHHHHH
Q psy14735 94 NTKYIWLLQDVTTGVCSKVISNKGTHQTNII-P---GANTYLSASDIDAAKNLLLKAKVIMFQGETP------WETTLYC 163 (340)
Q Consensus 94 ~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~-~---~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~------~~~~~~~ 163 (340)
+++++... +.+|+.+++..+++++++++.+ . ++...+++++++. .+.+++++++++++..+ .+.+.++
T Consensus 76 ~~~~v~~~-~~~t~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~-~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~ 153 (346)
T 3ktn_A 76 SDQWVGEK-GDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDF-EAFLAEVDMVHICGISLSLTEKTRDAALIL 153 (346)
T ss_dssp BCTTEEEC-CSCCEEEEEECCBTTBCCEEEECCCTTSTTTTCCGGGSCH-HHHHTTCSEEEECTHHHHHCHHHHHHHHHH
T ss_pred cceEEEeC-CCceEEEEEEecCCCCCceEEecCCCCChhhhCChhhcCh-HHHhCCCCEEEEeCccccCCHHHHHHHHHH
Confidence 99999765 6789999887776666666655 2 3556778877652 24578999999987542 2667888
Q ss_pred HHhchhcccCCceEEEeCCC--CCC---------CCchhhhhcCcEEEeCHHHHHHhhcCC-CC---ChhhHHHHHHHHH
Q psy14735 164 LSKLHVSLESRAKIIVNPSP--AVY---------PLNPIVMILADIICINEQEAEIITDMK-IN---NEEDLADCMEKLL 228 (340)
Q Consensus 164 ~~~a~~~~~~~~~v~~d~~~--~~~---------~~~~~~l~~~dil~~n~~E~~~l~~~~-~~---~~~~~~~~~~~l~ 228 (340)
++.+ ++++.++++|+.. .+| +.+.++++.+|++++|++|++.|++.. .. +.+++.++++.|.
T Consensus 154 ~~~a---~~~g~~v~~D~~~r~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~l~ 230 (346)
T 3ktn_A 154 AQKA---HAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFIPREDLEGEAQETELIQRFM 230 (346)
T ss_dssp HHHH---HHTTCEEEEECCCCGGGCCHHHHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCCCTTSCHHHHHHHHHHHHH
T ss_pred HHHH---HHcCCEEEEeCCCChHHcCCccHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCCCccccchHHHHHHHHHHH
Confidence 8998 8899999999962 233 234568899999999999999999876 22 3457888889998
Q ss_pred hc-CCCEEEEEecCCc-------eEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHH
Q psy14735 229 DM-KCNTVIITLGGSG-------VVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCH 300 (340)
Q Consensus 229 ~~-g~~~vvvt~G~~G-------~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~ 300 (340)
+. |++.|+||+|++| +++++++ +.+++|+ ++++++||+||||+|.|||+++|++ |+++++|+++|++
T Consensus 231 ~~~g~~~vvvT~G~~G~~~~~~g~~~~~~~--~~~~~~~-~~v~vvdttGAGDaF~ag~~~~l~~--g~~l~~a~~~A~a 305 (346)
T 3ktn_A 231 SQYNLEWFAGTTRSHSQNQNYLSGYLYTQN--EYQQSEK-RPLLNLDRIGAGDAYAAGILYGYSQ--NWSLEKAVTFATV 305 (346)
T ss_dssp HHHTCSEEEEEEEEECSSCEEEEEEEECSS--CEEECCC-EECCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHH
T ss_pred HhcCCCEEEEecCccccccCcceEEEEECC--ceEEeCC-CccccCCCCchhHHHHHHHHHHHHc--CCCHHHHHHHHHH
Confidence 74 9999999999998 8888765 6888999 8889999999999999999999999 9999999999999
Q ss_pred HHHHHhcccCCCCCCCCccCcchhhhhccccc
Q psy14735 301 VARQSLFNVGLQNSFPDKETLPDNLFSLKCEL 332 (340)
Q Consensus 301 ~Aa~~~~~~g~~~~~~~~~~v~~~l~~~~~~~ 332 (340)
+|+.++++.|+.+ +|+++++++++.+.+..+
T Consensus 306 ~aa~~v~~~G~~~-~p~~~ev~~~l~~~~~~~ 336 (346)
T 3ktn_A 306 NGVLAHTIQGDIP-LTTVKQVNHVLEHPNIDL 336 (346)
T ss_dssp HHHHHTTSSSSCC-CCCHHHHHHHHHCTTCCC
T ss_pred HHHHHhccCCCCC-CCCHHHHHHHHhcCCceE
Confidence 9999999999987 999999999998766654
No 17
>3hj6_A Fructokinase, FRK; fructose, transferase, carbohydrate ME; 2.80A {Halothermothrix orenii}
Probab=100.00 E-value=2.8e-49 Score=361.22 Aligned_cols=304 Identities=23% Similarity=0.290 Sum_probs=226.9
Q ss_pred CCCccccccCCCCCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhH
Q psy14735 2 GDWSHCVANLKDEADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGK 81 (340)
Q Consensus 2 ~~~~~~~~~~~~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~ 81 (340)
|.-.+.+..+++|++|+++|++++|++...+.+|.. +.......+||++.|+|++|++||.++.++|.+|+|.+|+
T Consensus 9 ~~~~~~~~~~~~~~~v~viG~~~~D~~~~~~~~p~~----~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~ 84 (327)
T 3hj6_A 9 GILNKNFSLSKGDLDVVSLGEILVDMISTEEVNSLS----QSREYTRHFGGSPANIAVNLSRLGKKVALISRLGADAFGN 84 (327)
T ss_dssp -------------CCEEEESCCEEEEECCCCCSSGG----GCCEEEEEEECHHHHHHHHHHHTTCCEEEECEEESSHHHH
T ss_pred EecccccccccCCCCEEEEccceEEEeccCCCCCcc----ccceeeeecCcHHHHHHHHHHHcCCcEEEEEEeCCCHHHH
Confidence 445566677788899999999999999877766542 4567788999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEEEEeCC-----CC
Q psy14735 82 SYLEELRKYNSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVIMFQGE-----TP 156 (340)
Q Consensus 82 ~i~~~l~~~~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~-----~~ 156 (340)
.+++.|++ .||+++++.+.++.+|+.+++..+ +|++++..+++++..++++++.. +.+++++++++++. .+
T Consensus 85 ~i~~~l~~-~gv~~~~v~~~~~~~t~~~~v~~~-~g~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~v~~~g~~l~~~~~ 160 (327)
T 3hj6_A 85 YLLDVLKG-EQIITDGIQQDKERRTTIVYVSKS-TRTPDWLPYREADMYLQEDDIIF--ELIKRSKVFHLSTFILSRKPA 160 (327)
T ss_dssp HHHHHHHH-TTCBCTTCEEESSSCCCEEEECCC-TTCCCEEEECSGGGGCCSCCCHH--HHHC--CEEEEESHHHHSHHH
T ss_pred HHHHHHHH-cCCCcccEEEcCCCCceEEEEEec-CCCccEEEecChhhhCChhhcCH--hHhccCCEEEECchHhcCchh
Confidence 99999999 999999998777889998877655 68888887777777776665543 34788999999873 24
Q ss_pred HHHHHHHHHhchhcccCCceEEEeCCCCC--C-------CCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHH
Q psy14735 157 WETTLYCLSKLHVSLESRAKIIVNPSPAV--Y-------PLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKL 227 (340)
Q Consensus 157 ~~~~~~~~~~a~~~~~~~~~v~~d~~~~~--~-------~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l 227 (340)
.+.+.++++.+ ++++.++++|+.+.. | +.+..+++.+|++++|++|++.+++. ++..++++.|
T Consensus 161 ~~~~~~~~~~a---~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~~~~~~~~~l 232 (327)
T 3hj6_A 161 RDTAIKAFNYA---REQGKIVCFDPCYRKVLWPEGDDGAGVVEEIISRADFVKPSLDDARHLFGP-----DSPENYVKRY 232 (327)
T ss_dssp HHHHHHHHHHH---HHTTCEEEEECCCCGGGSCSSSCSHHHHHHHHTTCSEECCBHHHHHHHHTT-----SCSSGGGGGG
T ss_pred HHHHHHHHHHH---HHCCCEEEEECCCchhhcCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-----CCHHHHHHHH
Confidence 57788899999 899999999997532 2 13457789999999999999999987 2344566777
Q ss_pred HhcCCCEEEEEecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhc
Q psy14735 228 LDMKCNTVIITLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLF 307 (340)
Q Consensus 228 ~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~ 307 (340)
+++|++.++||+|++|+++++++ +.+++|+ ++++++|||||||+|.|||++++++ |+++++|+++|+++|+.+++
T Consensus 233 ~~~g~~~vvvt~G~~G~~~~~~~--~~~~~~~-~~v~vvdttGAGDaf~ag~~~~l~~--g~~~~~a~~~A~a~aa~~v~ 307 (327)
T 3hj6_A 233 LELGVKAVILTLGEEGVIASDGE--EIIRIPA-FSEDAVDVTGAGDAFWSGFICGLLD--GYTVKRSIKLGNGVAAFKIR 307 (327)
T ss_dssp TTTTCSEEEEECSTTCEEEECSS--CEEESCS-STTC-----CCHHHHHHHHHHTTSS--CSTTHHHHHHHHCCCSSCC-
T ss_pred HhCCCCEEEEEECCCceEEEeCC--eeEEcCC-cccccCCCcChhHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhc
Confidence 78899999999999999999876 6889999 8899999999999999999999999 99999999999999999999
Q ss_pred ccCCCCCCCCccCcchhhh
Q psy14735 308 NVGLQNSFPDKETLPDNLF 326 (340)
Q Consensus 308 ~~g~~~~~~~~~~v~~~l~ 326 (340)
+.|+..++|+++++++++.
T Consensus 308 ~~G~~~~~p~~~ev~~~l~ 326 (327)
T 3hj6_A 308 GVGALSPVPSKEDIIKEYN 326 (327)
T ss_dssp -------------------
T ss_pred CCCCCCCCCCHHHHHHHhc
Confidence 9999888999999998874
No 18
>3umo_A 6-phosphofructokinase isozyme 2; glycolysis, transferase, PFK, enzyme; HET: ATP; 1.70A {Escherichia coli} PDB: 3n1c_A* 3cqd_A* 3ump_A* 3uqd_A* 3uqe_A*
Probab=100.00 E-value=1.6e-46 Score=340.40 Aligned_cols=296 Identities=16% Similarity=0.206 Sum_probs=257.3
Q ss_pred CCcEEEE-cccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcC
Q psy14735 14 EADIVVV-GSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNS 92 (340)
Q Consensus 14 ~~~I~vi-G~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~g 92 (340)
|++|+++ +|+++|+++.++++ .+|++++......++||++.|+|++|++||.++.++|.+|+| +|+.+++.|++ .|
T Consensus 1 m~~i~~v~~n~~~D~~~~v~~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~-~g 77 (309)
T 3umo_A 1 MVRIYTLTLAPSLDSATITPQI-YPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLAD-EN 77 (309)
T ss_dssp CCCEEEECSSCEEEEEEEESCC-CSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHH-TT
T ss_pred CCcEEEEecchhheEEEEcCcc-cCCCeEEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHH-cC
Confidence 4667777 68999999999999 789999999999999999999999999999999999999998 99999999999 99
Q ss_pred CcccceEeeCCCCCceEEEEEc-CCCCeEEEEeCCcCCCCCHHHHHHHHhh---ccCCcEEEEeCCC----CHHHHHHHH
Q psy14735 93 INTKYIWLLQDVTTGVCSKVIS-NKGTHQTNIIPGANTYLSASDIDAAKNL---LLKAKVIMFQGET----PWETTLYCL 164 (340)
Q Consensus 93 i~~~~v~~~~~~~t~~~~i~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~v~i~~~~----~~~~~~~~~ 164 (340)
|+++++.... +|+.++++++ ++|+++++...++ .+++++++.+.+. +..++++++++.. +.+...+++
T Consensus 78 v~~~~v~~~~--~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 153 (309)
T 3umo_A 78 VPVATVEAKD--WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLI 153 (309)
T ss_dssp CCEEEEECSS--CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHTTSCTTCEEEEESCCCTTCCHHHHHHHH
T ss_pred CceEEEEecC--CCeeEEEEEECCCCcEEEEEcCCC--CCCHHHHHHHHHHHHhcCCCCEEEEEccCCCCCCHHHHHHHH
Confidence 9999887653 4555555454 4788888776665 4888887654433 4578899999865 357889999
Q ss_pred HhchhcccCCceEEEeCCCCCCCCchhhhhc--CcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCC-CEEEEEecC
Q psy14735 165 SKLHVSLESRAKIIVNPSPAVYPLNPIVMIL--ADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKC-NTVIITLGG 241 (340)
Q Consensus 165 ~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~~--~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~-~~vvvt~G~ 241 (340)
+.+ ++++.++++|+.+. .+..+++. +|++++|++|++.|+|....+.+++.++++.|++++. +.++||+|+
T Consensus 154 ~~a---~~~~~~v~~D~~~~---~l~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~vvvt~G~ 227 (309)
T 3umo_A 154 SAA---QKQGIRCIVDSSGE---ALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVVVSLGP 227 (309)
T ss_dssp HHH---HHTTCEEEEECCHH---HHHHHTSSCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCEEEECGG
T ss_pred HHH---HhcCCEEEEECCcH---HHHHHhccCCCeEEEeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 999 89999999999753 24566776 5999999999999999877777889999999999887 899999999
Q ss_pred CceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCc
Q psy14735 242 SGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKETL 321 (340)
Q Consensus 242 ~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v 321 (340)
+|+++++++ +.+++|+ ++++++||+||||+|.|+|++++++ |+++++|+++|+++|+.+|++.|+. .|+++++
T Consensus 228 ~G~~~~~~~--~~~~~~~-~~v~vvdttGAGD~f~a~~~~~l~~--g~~~~~a~~~A~~~aa~~v~~~G~~--~~~~~ev 300 (309)
T 3umo_A 228 QGALGVDSE--NCIQVVP-PPVKSQSTVGAGDSMVGAMTLKLAE--NASLEEMVRFGVAAGSAATLNQGTR--LCSHDDT 300 (309)
T ss_dssp GCEEEECSS--CEEEECC-CSCCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHTTSSTTC--CCCHHHH
T ss_pred ccEEEEECC--cEEEEeC-CCcCCCCCcChHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhcCCCCC--CCCHHHH
Confidence 999999877 6889999 8899999999999999999999999 9999999999999999999999985 7999999
Q ss_pred chhhhhcc
Q psy14735 322 PDNLFSLK 329 (340)
Q Consensus 322 ~~~l~~~~ 329 (340)
++++.+.+
T Consensus 301 ~~~l~~~~ 308 (309)
T 3umo_A 301 QKIYAYLS 308 (309)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99997643
No 19
>4e3a_A Sugar kinase protein; structural genomics, protein structure initiative, nysgrc, S kinase, PSI-biology; HET: ADN; 1.63A {Rhizobium etli} PDB: 3ubo_A*
Probab=100.00 E-value=2.6e-47 Score=351.25 Aligned_cols=296 Identities=18% Similarity=0.239 Sum_probs=254.7
Q ss_pred CCCCCcEEEEcccccceeeecCC-------CCCCCCeeec-----------CceeeecCChHHHHHHHHHhcCCceeEEE
Q psy14735 11 LKDEADIVVVGSCLVEFITYVQT-------LPKPEETVKG-----------YHFEQRFSGKGANQCVAAAKLRASVALIS 72 (340)
Q Consensus 11 ~~~~~~I~viG~~~iD~~~~~~~-------~~~~~~~~~~-----------~~~~~~~GG~~~n~a~~l~~lG~~v~~~~ 72 (340)
+|++++|+++|++++|++..+++ +|.++.+... ......+||++.|+|++|++||.++.++|
T Consensus 22 ~m~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~li~~~~~~~l~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~ig 101 (352)
T 4e3a_A 22 SMTRFDVLTVGNAIVDIISRCNDQFLIDNQITKAAMNLIDAERAELLYSRMGPALEASGGSAGNTAAGVANLGGKAAYFG 101 (352)
T ss_dssp -CCSEEEEEECCCEEEEEEECCHHHHHHTTCCTTSEEECCHHHHHHHHHHSCSCEEEECCHHHHHHHHHHHHTCCEEEEC
T ss_pred HCCcccEEEECCceeeEEEecCHHHHHHcCCCCCcceEeCHHHHHHHHHHhhhccEecCCHHHHHHHHHHHcCCCeEEEE
Confidence 36778999999999999999986 6554433321 13467899999999999999999999999
Q ss_pred EecCChhhHHHHHHHhhhcCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEEEEe
Q psy14735 73 KLGNDKFGKSYLEELRKYNSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVIMFQ 152 (340)
Q Consensus 73 ~vG~D~~g~~i~~~l~~~~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~i~ 152 (340)
.+|+|.+|+.+++.|++ .||+++++.+.++.+|+.++++++++|+|++..+.++...+++++++. +.++++++++++
T Consensus 102 ~vG~D~~G~~l~~~l~~-~GV~~~~~~~~~~~~T~~~~v~v~~~g~r~~~~~~ga~~~l~~~~~~~--~~~~~~~~v~~~ 178 (352)
T 4e3a_A 102 NVAADQLGDIFTHDIRA-QGVHYQTKPKGAFPPTARSMIFVTEDGERSMNTYLGACVELGPEDVEA--DVVADAKVTYFE 178 (352)
T ss_dssp CCCSSHHHHHHHHHHHH-TTCEECCCCCCSSSCCEEEEEEECTTSCEEEEEECGGGGGCCGGGCCH--HHHHTEEEEEEE
T ss_pred EECCChHHHHHHHHHHH-cCCccceeeccCCCCCeEEEEEEcCCCceEEEeccChhhcCChhhCCH--HHHhhCCEEEEe
Confidence 99999999999999999 999999987776779999999999999999988888888888887764 347899999998
Q ss_pred CCC-----CHHHHHHHHHhchhcccCCceEEEeCCCCC-----CCCchhhhh--cCcEEEeCHHHHHHhhcCCCCChhhH
Q psy14735 153 GET-----PWETTLYCLSKLHVSLESRAKIIVNPSPAV-----YPLNPIVMI--LADIICINEQEAEIITDMKINNEEDL 220 (340)
Q Consensus 153 ~~~-----~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~-----~~~~~~~l~--~~dil~~n~~E~~~l~~~~~~~~~~~ 220 (340)
|.. +.+.+.++++.+ ++++.++++|++... ++.+.++++ ++|++++|++|++.|++. +++
T Consensus 179 G~~~~~~~~~~~~~~~~~~a---~~~g~~v~~D~~~~~~~~~~~~~l~~ll~~~~~dil~~N~~Ea~~l~g~-----~~~ 250 (352)
T 4e3a_A 179 GYLWDPPRAKEAILDCARIA---HQHGREMSMTLSDSFCVDRYRGEFLDLMRSGKVDIVFANRQEALSLYQT-----DDF 250 (352)
T ss_dssp GGGGSSSSHHHHHHHHHHHH---HHTTCEEEEECCCHHHHHHHHHHHHHHHHTTSCCEEEEEHHHHHHHTTC-----SCH
T ss_pred eeecCCchHHHHHHHHHHHH---HHcCCEEEEECCchhhHHHHHHHHHHHhcccCCcEEEeCHHHHHHHhCC-----CCH
Confidence 743 457788999999 999999999997532 123457788 899999999999999987 467
Q ss_pred HHHHHHHHhcCCCEEEEEecCCceEEEecCCCceEEEccCCCcC-cccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHH
Q psy14735 221 ADCMEKLLDMKCNTVIITLGGSGVVYATRDNPRLKTITVDHVEY-PIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSC 299 (340)
Q Consensus 221 ~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~p~~~~~~-vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~ 299 (340)
.++++.|.+ +++.++||+|++|+++++++ +.+++|+ ++++ ++||+||||+|.|||++++++ |+++++|+++|+
T Consensus 251 ~~a~~~l~~-~~~~vvvT~G~~G~~~~~~~--~~~~~~~-~~v~~vvDttGAGDaF~agfl~~l~~--g~~l~~a~~~A~ 324 (352)
T 4e3a_A 251 EEALNRIAA-DCKIAAVTMSENGAVILKGR--ERYYVNA-IRIREVVDTTGAGDLFASGFLYGYTQ--GRSLEDCGKLGC 324 (352)
T ss_dssp HHHHHHHHH-HSSEEEEECGGGCEEEEETT--EEEEECC-CCCSCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHH
T ss_pred HHHHHHHhc-CCCEEEEEECCCceEEEECC--EEEEECC-ccCCCCcCCCChHHHHHHHHHHHHHc--CCCHHHHHHHHH
Confidence 777777765 78999999999999999876 7889999 8875 899999999999999999999 999999999999
Q ss_pred HHHHHHhcccCCCCCCCCccCcch
Q psy14735 300 HVARQSLFNVGLQNSFPDKETLPD 323 (340)
Q Consensus 300 ~~Aa~~~~~~g~~~~~~~~~~v~~ 323 (340)
++|+.+|++.|+.+..|.++.+++
T Consensus 325 ~aAa~~v~~~G~~~~~~~~~~~~~ 348 (352)
T 4e3a_A 325 LAAGIVIQQIGPRPMTSLSEAAKQ 348 (352)
T ss_dssp HHHHHHTTSSSSSCSSCHHHHHHH
T ss_pred HHHHHHHcCCCCCCCcCHHHHHHH
Confidence 999999999999987777666654
No 20
>4du5_A PFKB; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.70A {Polaromonas SP}
Probab=100.00 E-value=5.5e-47 Score=347.23 Aligned_cols=290 Identities=17% Similarity=0.257 Sum_probs=239.3
Q ss_pred CCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCC
Q psy14735 14 EADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSI 93 (340)
Q Consensus 14 ~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi 93 (340)
+++|+++|++++|++.. .+++..+.......+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .||
T Consensus 26 ~~~vlviG~~~iD~~~~-----~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~-~GV 99 (336)
T 4du5_A 26 ALDVITFGEAMMLLVAD-----RPGPLEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLAAMAA-EGI 99 (336)
T ss_dssp CEEEEEECCCEEEEEES-----SSSCGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHT-TTC
T ss_pred CCCEEEEChhhhhccCC-----CCCccchhhheeecCCCHHHHHHHHHHhCCCcEEEEEEeCCCHHHHHHHHHHHH-cCC
Confidence 46899999999999873 356777788889999999999999999999999999999999999999999999 999
Q ss_pred cccceEeeCCCCCceEEEEEcCCCCeE-EEEe--CCcCCCCCHHHHHHHHhhccCCcEEEEeCCCC------HHHHHHHH
Q psy14735 94 NTKYIWLLQDVTTGVCSKVISNKGTHQ-TNII--PGANTYLSASDIDAAKNLLLKAKVIMFQGETP------WETTLYCL 164 (340)
Q Consensus 94 ~~~~v~~~~~~~t~~~~i~~~~~g~~~-~~~~--~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~------~~~~~~~~ 164 (340)
+++++.+.++.+|+.+++.++++|+++ +.++ .++...+++++++. +.+++++++++++..+ .+.+.+++
T Consensus 100 ~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~~~~~a~~~l~~~~~~~--~~l~~~~~v~~~g~~~~~~~~~~~~~~~~~ 177 (336)
T 4du5_A 100 DCSHVVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHMGVADIDE--AWLLSARHLHATGVFPAISATTLPAARKTM 177 (336)
T ss_dssp EEEEEEECTTSCCCEEEECCCSCC--CCEEEECTTCTGGGCCGGGCCH--HHHTTEEEEEEESSGGGSCTTHHHHHHHHH
T ss_pred CcceEEEcCCCCcEEEEEEEcCCCCcceEEEECCCChhHhCChhhCCH--hHhccCCEEEEcCchhhCChHHHHHHHHHH
Confidence 999998887889999999888888554 3333 35667788877754 3478899999987432 36677888
Q ss_pred HhchhcccCCceEEEeCCC--CCCC-------CchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEE
Q psy14735 165 SKLHVSLESRAKIIVNPSP--AVYP-------LNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTV 235 (340)
Q Consensus 165 ~~a~~~~~~~~~v~~d~~~--~~~~-------~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~v 235 (340)
+.+ ++.+.++++||.. ..|. .+.++++.+|++++|++|++.|+|. ++..++++.|.++|++.|
T Consensus 178 ~~a---~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~Ea~~l~g~-----~~~~~~~~~l~~~g~~~v 249 (336)
T 4du5_A 178 DLM---RAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGE-----TTPEGVARFYRQLGAKLV 249 (336)
T ss_dssp HHH---HHTTCEEEEECCCCGGGSSSHHHHHHHHHHHHTTCSEECCBHHHHHHHHCC-----CSHHHHHHHHHHTTCSEE
T ss_pred HHH---HHCCCEEEEeCcCCchhcCChHHHHHHHHHHHHhCCEEECCHHHHHHHhCC-----CCHHHHHHHHHhcCCCEE
Confidence 888 8899999999973 2231 2456789999999999999999997 467888999999999999
Q ss_pred EEEecCCceEEEecCCCceEEEccCCCcC-cccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCC
Q psy14735 236 IITLGGSGVVYATRDNPRLKTITVDHVEY-PIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNS 314 (340)
Q Consensus 236 vvt~G~~G~~~~~~~~~~~~~~p~~~~~~-vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~ 314 (340)
+||+|++|+++++++ +.+++|+ ++++ ++||+||||+|.|+|+++|++ |+++++|+++|+++|+.+|++.|+.++
T Consensus 250 vvt~G~~G~~~~~~~--~~~~~~~-~~v~~vvdttGAGDaf~a~~~~~l~~--g~~l~~a~~~A~~~aa~~v~~~G~~~~ 324 (336)
T 4du5_A 250 VVKLGAEGAYFDGEA--GSGRVAG-FPVAEVVDTVGAGDGFAVGVISALLD--GLGVPEAVKRGAWIGARAVQVLGDSEG 324 (336)
T ss_dssp EEECGGGCEEEEETT--EEEEECC-CCC-------CHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHC------C
T ss_pred EEEecCCceEEEECC--eEEEeCC-ccCCCCCCCccchHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhccCCCccC
Confidence 999999999999876 7889999 8887 999999999999999999999 999999999999999999999999988
Q ss_pred CCCccCcchh
Q psy14735 315 FPDKETLPDN 324 (340)
Q Consensus 315 ~~~~~~v~~~ 324 (340)
+|++++++++
T Consensus 325 ~p~~~ev~~~ 334 (336)
T 4du5_A 325 LPTRAELNAA 334 (336)
T ss_dssp CCCHHHHHCC
T ss_pred CCCHHHHHhc
Confidence 9999998764
No 21
>3loo_A Anopheles gambiae adenosine kinase; AP4A, P4-DI(adenosi tetraphosphate, transferase; HET: B4P; 2.00A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-47 Score=354.92 Aligned_cols=298 Identities=18% Similarity=0.254 Sum_probs=248.3
Q ss_pred CCCCcEEEEcccccceeeecCCC------CCCCCee--------------ecCceeeecCChHHHHHHHHHhc---CCce
Q psy14735 12 KDEADIVVVGSCLVEFITYVQTL------PKPEETV--------------KGYHFEQRFSGKGANQCVAAAKL---RASV 68 (340)
Q Consensus 12 ~~~~~I~viG~~~iD~~~~~~~~------~~~~~~~--------------~~~~~~~~~GG~~~n~a~~l~~l---G~~v 68 (340)
|++.+|+++|++++|++..+++. +++|..+ +.......+||++.|+|+++++| |.++
T Consensus 21 ~~~~~v~~iG~~~vD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~e~~~~~~~~~~~GG~~~N~a~~~~~L~~lG~~~ 100 (365)
T 3loo_A 21 LRDGMLVGLGNPLLDISAVVEKDLLNKYDMQPNNAILAEEKHMPMYQELIEKYQAEYIAGGSVQNSLRVAQWILQRPRTA 100 (365)
T ss_dssp CCTTSEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGTHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHTCTTSE
T ss_pred CCCccEEEECCCeEeEEEecCHHHHHHcCCCCCCceechhHHHHHHHHHhhcCCeEEecCCHHHHHHHHHHHhhcCCCcE
Confidence 55678999999999999999871 2334333 22356789999999999999987 9999
Q ss_pred eEEEEecCChhhHHHHHHHhhhcCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHH--HHhhccCC
Q psy14735 69 ALISKLGNDKFGKSYLEELRKYNSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDA--AKNLLLKA 146 (340)
Q Consensus 69 ~~~~~vG~D~~g~~i~~~l~~~~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~ 146 (340)
.++|.+|+|.+|+.+.+.|++ .||+++++.. .+.+|+.++++++ +++|+++.+.+++..+++++++. ..+.++++
T Consensus 101 ~~ig~vG~D~~g~~~~~~l~~-~GV~~~~~~~-~~~~Tg~~~i~~~-~~~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T 3loo_A 101 IFFGCVGQDEYARILEERATS-NGVNVQYQRS-ATSPTGTCAVLVT-GTQRSLCANLAAANDFTPEHLRSDGNRAYLQGA 177 (365)
T ss_dssp EEEEEEESBHHHHHHHHHHHH-HTCEEEEEEE-SSSCCEEEEEEEE-TTEEEEEEECGGGGGCCGGGGGSHHHHHHHHHC
T ss_pred EEEEEecCCchHHHHHHHHHH-CCCceecccc-CCCCCeEEEEEEE-CCceEEEeccchHhhCCHhHcCchhhHHHHhhC
Confidence 999999999999999999999 9999999876 5779999999998 78888887888888888887642 23457889
Q ss_pred cEEEEeCCC---CHHHHHHHHHhchhcccCCceEEEeCCCCCC-----CCchhhhhcCcEEEeCHHHHHHhhcCCCCChh
Q psy14735 147 KVIMFQGET---PWETTLYCLSKLHVSLESRAKIIVNPSPAVY-----PLNPIVMILADIICINEQEAEIITDMKINNEE 218 (340)
Q Consensus 147 ~~v~i~~~~---~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~-----~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~ 218 (340)
+++|++|.. +++.+.++++.+ +++++++++|++...+ +.+..+++++|++++|++|++.+++....+.+
T Consensus 178 ~~v~i~G~~~~~~~~~~~~~~~~a---~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~g~~~~~~~ 254 (365)
T 3loo_A 178 QFFYVSGFFFTVSFESALSVAKEA---AATGRMFMMNLSAPFVPQFYKNNLEEIFPYVDVLFGNETEAIALAKEFNYGTE 254 (365)
T ss_dssp SEEEEEGGGHHHHHHHHHHHHHHH---HHTTCEEEEECCSTHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCCC
T ss_pred CEEEEeeeeccCCHHHHHHHHHHH---HHcCCEEEEECCchhhhHHHHHHHHHHHHhCCEEecCHHHHHHHhcccCCCCC
Confidence 999999753 467788899999 8899999999985532 34567889999999999999999986554556
Q ss_pred hHHHHHHHHHhc------CCCEEEEEecCCceEEE--ecCCCceEEEccCCCc---CcccCCCcchHHHHHHHHHHHcCC
Q psy14735 219 DLADCMEKLLDM------KCNTVIITLGGSGVVYA--TRDNPRLKTITVDHVE---YPIESEGVGDCFVGALAYYLCYFP 287 (340)
Q Consensus 219 ~~~~~~~~l~~~------g~~~vvvt~G~~G~~~~--~~~~~~~~~~p~~~~~---~vvdttGaGDaF~ag~~~~l~~~~ 287 (340)
++.++++.|.++ +++.+|||+|++|++++ +++ +.+++|+ +++ +++|||||||+|.|||++++++
T Consensus 255 ~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~~~--~~~~~~~-~~v~~~~vvDttGAGDaF~agfl~~l~~-- 329 (365)
T 3loo_A 255 DLREIGKRIAALPKENGKRKRIVIITQGSDPVLLIEAGTD--NVREFPV-QKLAPEQMVDTNGAGDAFVGGFLAQLLQ-- 329 (365)
T ss_dssp CHHHHHHHHHTSCCSSTTSCCEEEEEETTEEEEEEETTCS--CCEEECC-CCCC------CTTHHHHHHHHHHHHHHT--
T ss_pred CHHHHHHHHHhhhhhccCCCCEEEEEeCCCCEEEEEecCC--eEEEEec-cccCCCCccCCCChHHHHHHHHHHHHHC--
Confidence 888899999874 89999999999999999 554 6888999 776 8999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCcc
Q psy14735 288 QLPLGEIILRSCHVARQSLFNVGLQNSFPDKETLP 322 (340)
Q Consensus 288 g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~ 322 (340)
|+++++|+++|+++|+.++++.|+. +|+.+++.
T Consensus 330 g~~l~~a~~~a~~~Aa~~v~~~G~~--~p~~~~~~ 362 (365)
T 3loo_A 330 SRTVDVCIKCGIWAAREIIQRSGCT--FEGEPSFC 362 (365)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHGGGG--GGSCCCC-
T ss_pred CCCHHHHHHHHHHHHHHHHcCCCCC--CCCCccCC
Confidence 9999999999999999999999986 46666554
No 22
>3otx_A Adenosine kinase, putative; AP5A, transferase-transferase inhibitor CO; HET: AP5; 1.55A {Trypanosoma brucei} PDB: 2xtb_A*
Probab=100.00 E-value=4.9e-47 Score=349.21 Aligned_cols=296 Identities=19% Similarity=0.227 Sum_probs=251.2
Q ss_pred CCCcEEEEcccccceeeecCC--------------------CCCCCCeeecCceeeecCChHHHHHHHHHhc----CCc-
Q psy14735 13 DEADIVVVGSCLVEFITYVQT--------------------LPKPEETVKGYHFEQRFSGKGANQCVAAAKL----RAS- 67 (340)
Q Consensus 13 ~~~~I~viG~~~iD~~~~~~~--------------------~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l----G~~- 67 (340)
+..+|+++|++++|++..+++ +|..++..+.......+||++.|+|+++++| |.+
T Consensus 6 ~~~~v~~iG~~~lD~~~~v~~~~l~~~~l~~g~~~l~~~~~~p~~~~~~~~~~~~~~~GG~~~N~a~~la~L~~~~G~~~ 85 (347)
T 3otx_A 6 APLRVYVQCNPLLDVSAHVSDEFLVKYGLERGTAILLSERQKGIFDDIEKMPNVRYVPGGSGLNVARVAQWMQQAYKGKF 85 (347)
T ss_dssp CCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGTTHHHHHHTSTTCEEEECCHHHHHHHHHHHTTGGGTTSS
T ss_pred CCCcEEEECCceeeEEEecCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEecCCHHHHHHHHHHHhcccCCCCe
Confidence 456899999999999999985 4444445555577899999999999999999 999
Q ss_pred eeEEEEecCChhhHHHHHHHhhhcCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHH--HHhhccC
Q psy14735 68 VALISKLGNDKFGKSYLEELRKYNSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDA--AKNLLLK 145 (340)
Q Consensus 68 v~~~~~vG~D~~g~~i~~~l~~~~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~--~~~~~~~ 145 (340)
+.++|.+|+|.+|+.+++.|++ .||+++++. ..+.+|+.++++++ +|+|+++.+.++...+++++++. ..+.+++
T Consensus 86 ~~~ig~vG~D~~g~~~~~~l~~-~GV~~~~~~-~~~~~T~~~~i~~~-~g~r~~~~~~ga~~~~~~~~~~~~~~~~~~~~ 162 (347)
T 3otx_A 86 VTYVGCIADDRYGKVLKEAAEH-EGIVMAVEH-TTKAGSGACAVCIT-GKERTLVADLGAANHLSSEHMRSPAVVRAMDE 162 (347)
T ss_dssp EEEECEECSSHHHHHHHHHHHH-HTCEECCEE-CSSSCEEEEEEEEE-TTEEEEEEEEEGGGGCCHHHHTSHHHHHHHHH
T ss_pred EEEEEEecCChHHHHHHHHHHH-CCCceeccc-CCCCCCeEEEEEEE-CCceeeeechhhhhcCCHHHcCchhhHHHHhh
Confidence 9999999999999999999999 999999985 45679999999998 89999887778888888888753 2345789
Q ss_pred CcEEEEeCC---CCHHHHHHHHHhchhcccCCceEEEeCCCCCC-----CCchhhhhcCcEEEeCHHHHHHhhcCCCCCh
Q psy14735 146 AKVIMFQGE---TPWETTLYCLSKLHVSLESRAKIIVNPSPAVY-----PLNPIVMILADIICINEQEAEIITDMKINNE 217 (340)
Q Consensus 146 ~~~v~i~~~---~~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~-----~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~ 217 (340)
++++|+++. .+++...++++.+ ++++.++++|++...+ +.+.++++++|++++|++|++.+++....+.
T Consensus 163 ~~~~~~~g~~~~~~~~~~~~~~~~a---~~~g~~v~~d~~~~~~~~~~~~~l~~~l~~~dil~~N~~Ea~~l~~~~~~~~ 239 (347)
T 3otx_A 163 SRIFYFSGFTLTVDVNHVLQACRKA---REVDGLFMINLSAPFIMQFFSAQLGEVLPYTDIIVANRHEAKEFANMMKWDT 239 (347)
T ss_dssp CSEEEEEGGGGGTCHHHHHHHHHHH---HHTTCEEEEECCCHHHHHHCHHHHHHHGGGCSEEEEEHHHHHHHHHHHTCCC
T ss_pred CCEEEEeeeecccCHHHHHHHHHHH---HHhCCEEEeeCchhhhHHHHHHHHHHHHhhCCEEecCHHHHHHHhcccCCCc
Confidence 999999874 4678899999999 9999999999985432 3456789999999999999999987644344
Q ss_pred hhHHHHHHHHH------hcCCCEEEEEecCCceEEEecCCCceEEEccCCCc---CcccCCCcchHHHHHHHHHHHcCCC
Q psy14735 218 EDLADCMEKLL------DMKCNTVIITLGGSGVVYATRDNPRLKTITVDHVE---YPIESEGVGDCFVGALAYYLCYFPQ 288 (340)
Q Consensus 218 ~~~~~~~~~l~------~~g~~~vvvt~G~~G~~~~~~~~~~~~~~p~~~~~---~vvdttGaGDaF~ag~~~~l~~~~g 288 (340)
+++.++++.|. +.+++.|+||+|++|+++++++ +.+++|+ +++ +++|||||||+|.|||+++|++ |
T Consensus 240 ~~~~~~~~~l~~~~~~~~~g~~~vvvT~G~~Ga~~~~~~--~~~~~~~-~~~~~~~vvDttGAGDaF~ag~l~~l~~--g 314 (347)
T 3otx_A 240 DCVEEIARRAVSEVPYTGTKGRVVVFTRDIESTVLATKD--GVETVPV-PQLDQDKVIDMNGAGDAFMGGFLSAYAV--G 314 (347)
T ss_dssp CCHHHHHHHHHHTSCCCCSSCCEEEEEETTEEEEEEETT--EEEEECC-CCCCGGGCCSSCCSHHHHHHHHHHHHTT--T
T ss_pred CCHHHHHHHHHhhhccccCCCCEEEEEeCCCCeEEEECC--eEEEEEe-cccCCCCCCCCCChHHHHHHHHHHHHHc--C
Confidence 67788888888 4689999999999999999876 6888888 666 8899999999999999999999 9
Q ss_pred CCHHHHHHHHHHHHHHHhcccCCCCCCCCccCc
Q psy14735 289 LPLGEIILRSCHVARQSLFNVGLQNSFPDKETL 321 (340)
Q Consensus 289 ~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v 321 (340)
+++++|+++|+++|+.+|++.|+. +|++.++
T Consensus 315 ~~l~~a~~~a~~~aa~~v~~~G~~--~p~~~~~ 345 (347)
T 3otx_A 315 KDLRRCCETGHYTAQEVIQRDGCS--FPEKPSF 345 (347)
T ss_dssp CCHHHHHHHHHHHHHHHHTCC------CCSCSC
T ss_pred CCHHHHHHHHHHHHHHHHcccCCC--CCCCCCC
Confidence 999999999999999999999964 6776543
No 23
>2v78_A Fructokinase; transferase, PFKB family carbohydrate kinase, 2- keto-3-deoxygluconate kinase; 2.00A {Sulfolobus solfataricus} PDB: 2var_A*
Probab=100.00 E-value=2.9e-46 Score=339.24 Aligned_cols=289 Identities=18% Similarity=0.240 Sum_probs=248.1
Q ss_pred CcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCCc
Q psy14735 15 ADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSIN 94 (340)
Q Consensus 15 ~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi~ 94 (340)
++|+++|++++|++. |.+++..+.......+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .||+
T Consensus 2 ~~v~viG~~~~D~~~-----~~~~~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~i~~vG~D~~g~~~~~~l~~-~gv~ 75 (313)
T 2v78_A 2 VDVIALGEPLIQFNS-----FNPGPLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRA-QGID 75 (313)
T ss_dssp CCEEEECCCEEEEEE-----SSSSCGGGCCEEEEEEECHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHHHHH-TTCB
T ss_pred CeEEEECcceEEEec-----CCCCcccccceeEecCCChHHHHHHHHHHCCCcEEEEEEeCCCHHHHHHHHHHHH-cCCc
Confidence 589999999999986 4556666777888999999999999999999999999999999999999999999 9999
Q ss_pred ccceEeeCCCCCceEEEE--EcCCCCeEEEEeC--CcCCCCCHHHHHHHHhhccCCcEEEEeCCCC------HHHHHHHH
Q psy14735 95 TKYIWLLQDVTTGVCSKV--ISNKGTHQTNIIP--GANTYLSASDIDAAKNLLLKAKVIMFQGETP------WETTLYCL 164 (340)
Q Consensus 95 ~~~v~~~~~~~t~~~~i~--~~~~g~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~------~~~~~~~~ 164 (340)
++++.+.++.+|+.+++. ++++|++++.++. ++...+++++++. +.+++++++++++..+ .+...+++
T Consensus 76 ~~~v~~~~~~~t~~~~~~~~~~~~g~~~~~~~~~~~a~~~l~~~~~~~--~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~ 153 (313)
T 2v78_A 76 TSHIKVDNESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINE--NYVRNSRLVHSTGITLAISDNAKEAVIKAF 153 (313)
T ss_dssp CTTEEEETTSCCCEEEEEESSSSTTCEEEEEECTTCSGGGCCGGGCCH--HHHHTSSEEEEEHHHHHHCHHHHHHHHHHH
T ss_pred CceEEEcCCCCceEEEEEEecCCCCCeeEEEeCCcChhHhCChhhCCH--HHhcCCCEEEEcCchhhcChHHHHHHHHHH
Confidence 999988777899999988 8888988876554 4566777776654 2467899999986533 35667777
Q ss_pred HhchhcccCCceEEEeCCCC--CCC-------CchhhhhcCc--EEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCC
Q psy14735 165 SKLHVSLESRAKIIVNPSPA--VYP-------LNPIVMILAD--IICINEQEAEIITDMKINNEEDLADCMEKLLDMKCN 233 (340)
Q Consensus 165 ~~a~~~~~~~~~v~~d~~~~--~~~-------~~~~~l~~~d--il~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~ 233 (340)
+.+ ++. ++|+... +|. .+.++++++| ++++|++|++.|++. +++.++++.|.++|++
T Consensus 154 ~~a---~~~----~~D~~~~~~~~~~~~~~~~~~~~~l~~~d~~il~~N~~E~~~l~g~-----~~~~~~~~~l~~~g~~ 221 (313)
T 2v78_A 154 ELA---KSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDV-----TDPDEAYRKYKELGVK 221 (313)
T ss_dssp HHC---SSE----EEECCCCGGGSSCHHHHHHHHHHHHHHSCEEEEEECHHHHHHHHSC-----CCHHHHHHHHHHTTEE
T ss_pred HHH---HHh----CcCCcCChhhcCCHHHHHHHHHHHHHhcCeeEEECcHHHHHHHhCC-----CCHHHHHHHHHhCCCC
Confidence 777 554 8898642 232 3456789999 999999999999986 4677888899999999
Q ss_pred EEEEEecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCC
Q psy14735 234 TVIITLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQN 313 (340)
Q Consensus 234 ~vvvt~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~ 313 (340)
.++||+|++|+++++++ +.+++|+ ++++++|||||||+|.|||++++++ |+++++|+++|+++|+.++++.|+.+
T Consensus 222 ~vvvt~G~~G~~~~~~~--~~~~~~~-~~v~vvDttGAGDaF~ag~~~~l~~--g~~~~~a~~~a~~~aa~~v~~~G~~~ 296 (313)
T 2v78_A 222 VLLYKLGSKGAIAYKDN--VKAFKDA-YKVPVEDPTGAGDAMAGTFVSLYLQ--GKDIEYSLAHGIAASTLVITVRGDNE 296 (313)
T ss_dssp EEEEECGGGCEEEEETT--EEEEECC-CCCCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHTSSSSST
T ss_pred EEEEEECCCCcEEeeCC--cEEEeCC-CcCCccCCCCchHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhccCCCCC
Confidence 99999999999998765 6889999 8889999999999999999999999 99999999999999999999999988
Q ss_pred CCCCccCcchhhhhc
Q psy14735 314 SFPDKETLPDNLFSL 328 (340)
Q Consensus 314 ~~~~~~~v~~~l~~~ 328 (340)
++|+++++++++.+.
T Consensus 297 ~~~~~~~v~~~~~~~ 311 (313)
T 2v78_A 297 LTPTLEDAERFLNEF 311 (313)
T ss_dssp TCCCHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHhc
Confidence 889999999988653
No 24
>2jg1_A Tagatose-6-phosphate kinase; phosphoryl transfer, conformational changes, transferase, lactose metabolism; HET: MSE ANP TA6; 2.00A {Staphylococcus aureus} PDB: 2jgv_A* 2q5r_A*
Probab=100.00 E-value=1.5e-45 Score=336.79 Aligned_cols=294 Identities=13% Similarity=0.167 Sum_probs=252.7
Q ss_pred CcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCCc
Q psy14735 15 ADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSIN 94 (340)
Q Consensus 15 ~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi~ 94 (340)
|.++++|++++|+++.++++ .+|++++.......+||++.|+|++|++||.++.++|.+|+ .+|+.+++.|++ .||+
T Consensus 21 Mi~~v~G~~~~D~~~~~~~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~-~~G~~l~~~L~~-~gV~ 97 (330)
T 2jg1_A 21 MILTLTLNPSVDISYPLTAL-KLDDVNRVQEVSKTAGGKGLNVTRVLAQVGEPVLASGFIGG-ELGQFIAKKLDH-ADIK 97 (330)
T ss_dssp CEEEEESSCEEEEEEEESCC-CTTSEEEESCCEEEEECHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHH-TTCE
T ss_pred EEEEEecchhheEEEecCCc-cCCceEEeceEEEcCCchHHHHHHHHHHhCCCeEEEEEecc-hhHHHHHHHHHH-CCCc
Confidence 56668899999999999997 78999998889999999999999999999999999999996 699999999999 9999
Q ss_pred ccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHH----hhccCCcEEEEeCCCC----HHHHHHHHHh
Q psy14735 95 TKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAK----NLLLKAKVIMFQGETP----WETTLYCLSK 166 (340)
Q Consensus 95 ~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~----~~~~~~~~v~i~~~~~----~~~~~~~~~~ 166 (340)
++++...+ .|+.++++++++ +++.+...++ .+++++++.+. +.+++++++++++..+ .+...++++.
T Consensus 98 ~~~v~~~~--~t~~~~~~v~~~-~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~ 172 (330)
T 2jg1_A 98 HAFYNIKG--ETRNCIAILHEG-QQTEILEQGP--EIDNQEAAGFIKHFEQMMEKVEAVAISGSLPKGLNQDYYAQIIER 172 (330)
T ss_dssp ECCEEESS--CCEEEEEEEETT-EEEEEEECCC--BCCHHHHHHHHHHHHHHGGGCSEEEEESCCCBTSCTTHHHHHHHH
T ss_pred eeEEEccC--CCeeEEEEEeCC-CcEEEECCCC--CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCCCHHHHHHHHHH
Confidence 99987653 477777777765 6655443343 57777766432 3468899999988664 3678889999
Q ss_pred chhcccCCceEEEeCCCCCCCCchhhhh---cCcEEEeCHHHHHHhhcCCCC-ChhhHHHHHHHHHhcCCCEEEEEecCC
Q psy14735 167 LHVSLESRAKIIVNPSPAVYPLNPIVMI---LADIICINEQEAEIITDMKIN-NEEDLADCMEKLLDMKCNTVIITLGGS 242 (340)
Q Consensus 167 a~~~~~~~~~v~~d~~~~~~~~~~~~l~---~~dil~~n~~E~~~l~~~~~~-~~~~~~~~~~~l~~~g~~~vvvt~G~~ 242 (340)
+ ++++.++++|+.+. .+.++++ .+|++++|++|++.+++.... +.+++.++++.|+++|++.|+||+|++
T Consensus 173 a---~~~g~~v~~D~~~~---~l~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~ 246 (330)
T 2jg1_A 173 C---QNKGVPVILDCSGA---TLQTVLENPYKPTVIKPNISELYQLLNQPLDESLESLKQAVSQPLFEGIEWIIVSLGAQ 246 (330)
T ss_dssp H---HTTTCCEEEECCHH---HHHHHHTSSSCCSEECCBHHHHHHHTTSCCCCCHHHHHHHHHSGGGTTCSEEEEECGGG
T ss_pred H---HHCCCEEEEECCcH---HHHHHHhccCCceEEEeCHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCCEEEEeecCC
Confidence 9 89999999999753 2456666 899999999999999987554 556788888889889999999999999
Q ss_pred ceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCcc
Q psy14735 243 GVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKETLP 322 (340)
Q Consensus 243 G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~ 322 (340)
|+++++++ +.+++|+ ++++++|||||||+|.|||++++++ |+++++|+++|+++|+.++++.|+. .|++++++
T Consensus 247 Ga~~~~~~--~~~~~~~-~~v~vvDttGAGDaF~ag~~~~l~~--g~~l~~al~~A~a~aa~~v~~~G~~--~~~~~ev~ 319 (330)
T 2jg1_A 247 GAFAKHNH--TFYRVNI-PTISVLNPVGSGDSTVAGITSAILN--HENDHDLLKKANTLGMLNAQEAQTG--YVNLNNYD 319 (330)
T ss_dssp CEEEEETT--EEEEEEC-CCCCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHTSSSSS--CCCGGGHH
T ss_pred ceEEEeCC--CEEEEeC-CCccccCCCcHHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhcCcCCC--CCCHHHHH
Confidence 99999876 6888999 8889999999999999999999999 9999999999999999999999984 79999999
Q ss_pred hhhhhcc
Q psy14735 323 DNLFSLK 329 (340)
Q Consensus 323 ~~l~~~~ 329 (340)
+++.+..
T Consensus 320 ~~~~~i~ 326 (330)
T 2jg1_A 320 DLFNQIE 326 (330)
T ss_dssp HHHTTCE
T ss_pred HHHhceE
Confidence 9987643
No 25
>2dcn_A Hypothetical fructokinase; 2-keto-3-deoxygluconate kinase, 2-keto- gluconate, transferase; HET: CKP ADP; 2.25A {Sulfolobus tokodaii} SCOP: c.72.1.1 PDB: 1wye_A*
Probab=100.00 E-value=5.8e-46 Score=337.01 Aligned_cols=289 Identities=17% Similarity=0.228 Sum_probs=247.9
Q ss_pred CCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCC
Q psy14735 14 EADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSI 93 (340)
Q Consensus 14 ~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi 93 (340)
|++|+++|++++|++. |.+++..+.......+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .||
T Consensus 1 m~~v~viG~~~~D~~~-----~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~l~~-~gv 74 (311)
T 2dcn_A 1 MAKLITLGEILIEFNA-----LSPGPLRHVSYFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRG-QGV 74 (311)
T ss_dssp -CEEEEESCCEEEEEE-----SSSSCGGGCCEEEEEEECHHHHHHHHHHHTTCEEEEECEEESSHHHHHHHHHHHH-TTC
T ss_pred CCCEEEECCceEEEec-----CCCCcccccceeeecCCChHHHHHHHHHHCCCceEEEEEeCCCHHHHHHHHHHHH-cCC
Confidence 3689999999999987 4556666777888899999999999999999999999999999999999999999 999
Q ss_pred cccceEeeCCCCCceEEEEEcCCCC--eEEEEeC--CcCCCCCHHHHHHHHhhccCCcEEEEeCCCC------HHHHHHH
Q psy14735 94 NTKYIWLLQDVTTGVCSKVISNKGT--HQTNIIP--GANTYLSASDIDAAKNLLLKAKVIMFQGETP------WETTLYC 163 (340)
Q Consensus 94 ~~~~v~~~~~~~t~~~~i~~~~~g~--~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~------~~~~~~~ 163 (340)
+++++.+.++.+|+.+++.++++|+ |++.++. ++...+++++++. +.+++++++++++..+ .+...++
T Consensus 75 ~~~~v~~~~~~~t~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~v~~~g~~~~~~~~~~~~~~~~ 152 (311)
T 2dcn_A 75 DVSHMKIDPSAPTGIFFIQRHYPVPLKSESIYYRKGSAGSKLSPEDVDE--EYVKSADLVHSSGITLAISSTAKEAVYKA 152 (311)
T ss_dssp BCTTCEEETTSCCCEEEEEESCSSTTCEEEEEECTTCTGGGCCGGGCCH--HHHTTCSEEEEEHHHHHSCHHHHHHHHHH
T ss_pred CcceEEEcCCCCceEEEEEECCCCCccceEEEecCcChhhhCChhhcCh--HHHcCCCEEEEeCcccccChHHHHHHHHH
Confidence 9999987777899999998888898 8776554 4566777776654 3478899999986432 3666777
Q ss_pred HHhchhcccCCceEEEeCCC--CCCC------Cchhhhh--cCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCC
Q psy14735 164 LSKLHVSLESRAKIIVNPSP--AVYP------LNPIVMI--LADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCN 233 (340)
Q Consensus 164 ~~~a~~~~~~~~~v~~d~~~--~~~~------~~~~~l~--~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~ 233 (340)
++.+ ++. ++|+.. ..|. .+..+++ ++|++++|++|++.|++. +++.++++.|+++ ++
T Consensus 153 ~~~a---~~~----~~D~~~~~~~~~~~~~~~~~~~~l~~~~~dil~~N~~E~~~l~g~-----~~~~~~~~~l~~~-~~ 219 (311)
T 2dcn_A 153 FEIA---SNR----SFDTNIRLKLWSAEEAKREILKLLSKFHLKFLITDTDDSKIILGE-----SDPDKAAKAFSDY-AE 219 (311)
T ss_dssp HHHC---SSE----EEECCCCTTTSCHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHHSC-----CCHHHHHHHHTTT-EE
T ss_pred HHHH---HHh----CcCccCchhhCChHHHHHHHHHHHhhcCCcEEECCHHHHHHHhCC-----CCHHHHHHHHHHh-CC
Confidence 8887 554 789864 2332 3446788 999999999999999986 4677888889888 89
Q ss_pred EEEEEecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCC
Q psy14735 234 TVIITLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQN 313 (340)
Q Consensus 234 ~vvvt~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~ 313 (340)
.++||+|++|+++++++ +.+++|+ ++++++|||||||+|.|||++++++ |+++++|+++|+++|+.++++.|+.+
T Consensus 220 ~vvvt~G~~G~~~~~~~--~~~~~~~-~~v~vvdttGAGDaf~a~~~~~l~~--g~~~~~a~~~a~~~aa~~v~~~G~~~ 294 (311)
T 2dcn_A 220 IIVMKLGPKGAIVYYDG--KKYYSSG-YQVPVEDVTGAGDALGGTFLSLYYK--GFEMEKALDYAIVASTLNVMIRGDQE 294 (311)
T ss_dssp EEEEEEETTEEEEEETT--EEEEEEC-CCCCCSCCTTHHHHHHHHHHHHHTT--TCCHHHHHHHHHHHHHHHTTSSSSST
T ss_pred EEEEEECCCCcEEEeCC--cEEEeCC-ccccccCCCCchHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhccCCCCC
Confidence 99999999999999876 6888999 8889999999999999999999999 99999999999999999999999998
Q ss_pred CCCCccCcchhhhhc
Q psy14735 314 SFPDKETLPDNLFSL 328 (340)
Q Consensus 314 ~~~~~~~v~~~l~~~ 328 (340)
++|+++++++++.+.
T Consensus 295 ~~~~~~~v~~~~~~~ 309 (311)
T 2dcn_A 295 NLPTTKDIETFLREM 309 (311)
T ss_dssp TCCCHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHhc
Confidence 899999999988653
No 26
>3cqd_A 6-phosphofructokinase isozyme 2; phosphofructokinases, PFK-2, glycolysis, transferase; HET: ATP; 1.98A {Escherichia coli} PDB: 3n1c_A*
Probab=100.00 E-value=1.8e-45 Score=333.41 Aligned_cols=293 Identities=17% Similarity=0.219 Sum_probs=246.8
Q ss_pred CcEEEE-cccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCC
Q psy14735 15 ADIVVV-GSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSI 93 (340)
Q Consensus 15 ~~I~vi-G~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi 93 (340)
++|+++ |++++|+++.+++ |.+|++++.......+||++.|+|.+|++||.++.++|.+|+| +|+.+++.|++ .||
T Consensus 2 ~~I~~v~g~~~~D~~~~~~~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~-~gv 78 (309)
T 3cqd_A 2 VRIYTLTLAPSLDSATITPQ-IYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAIFPAGGA-TGEHLVSLLAD-ENV 78 (309)
T ss_dssp CCEEEECSSCEEEEEEEESC-CCSSSEEECCCCEEEEESHHHHHHHHHHHTTCCEEEEEEECHH-HHHHHHHHHHH-TTC
T ss_pred ceEEEEeccchheEEEEcCC-CcCCCeeeccceeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHH-cCC
Confidence 458855 6999999999998 5889999998999999999999999999999999999999997 89999999999 999
Q ss_pred cccceEeeCCCCCceEEEE-EcCCCCeEEEEeCCcCCCCCHHHHHHHH----hhccCCcEEEEeCCCC----HHHHHHHH
Q psy14735 94 NTKYIWLLQDVTTGVCSKV-ISNKGTHQTNIIPGANTYLSASDIDAAK----NLLLKAKVIMFQGETP----WETTLYCL 164 (340)
Q Consensus 94 ~~~~v~~~~~~~t~~~~i~-~~~~g~~~~~~~~~~~~~~~~~~i~~~~----~~~~~~~~v~i~~~~~----~~~~~~~~ 164 (340)
+++++.... .|+.++++ ++++|+++++...++ .+++++++.+. +.+++ +++++++..+ .+...+++
T Consensus 79 ~~~~v~~~~--~t~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~~~ 153 (309)
T 3cqd_A 79 PVATVEAKD--WTRQNLHVHVEASGEQYRFVMPGA--ALNEDEFRQLEEQVLEIESG-AILVISGSLPPGVKLEKLTQLI 153 (309)
T ss_dssp CEEEEECSS--CCCCCEEEEETTTCCEEEEECCCC--CCCHHHHHHHHHHHHTSCTT-CEEEEESCCCTTCCHHHHHHHH
T ss_pred CceeEEcCC--CCeeEEEEEEcCCCCEEEEEcCCC--CCCHHHHHHHHHHHHHhhcC-CEEEEECCCCCCCCHHHHHHHH
Confidence 999987654 36666666 788898866554443 57777765432 34677 9999998654 57888899
Q ss_pred HhchhcccCCceEEEeCCCCCCCCchh-hhhcC-cEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcC-CCEEEEEecC
Q psy14735 165 SKLHVSLESRAKIIVNPSPAVYPLNPI-VMILA-DIICINEQEAEIITDMKINNEEDLADCMEKLLDMK-CNTVIITLGG 241 (340)
Q Consensus 165 ~~a~~~~~~~~~v~~d~~~~~~~~~~~-~l~~~-dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g-~~~vvvt~G~ 241 (340)
+.+ ++++.++++||.+.. ... +.+.+ |++++|++|++.|++....+.+++.++++.|+++| ++.++||+|+
T Consensus 154 ~~a---~~~g~~v~~D~~~~~---~~~~l~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~~vvvt~G~ 227 (309)
T 3cqd_A 154 SAA---QKQGIRCIVDSSGEA---LSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKAKRVVVSLGP 227 (309)
T ss_dssp HHH---HTTTCEEEEECCHHH---HHHHTTTCCBSEECCBHHHHHHHHTSCCCSTTHHHHHHHHHHHTTSBSCEEEECGG
T ss_pred HHH---HHcCCeEEEECChHH---HHHHHHhCCCEEEeeCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 999 889999999997531 223 33778 99999999999999987666678888999999999 9999999999
Q ss_pred CceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCc
Q psy14735 242 SGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKETL 321 (340)
Q Consensus 242 ~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v 321 (340)
+|+++++++ +.+++|+ ++++++||+||||+|.|+|++++++ |+++++|+++|+++|+.++++.|+. .|+++++
T Consensus 228 ~G~~~~~~~--~~~~~~~-~~v~~vdttGAGDaf~a~~~~~l~~--g~~~~~a~~~A~~~aa~~~~~~G~~--~~~~~~v 300 (309)
T 3cqd_A 228 QGALGVDSE--NCIQVVP-PPVKSQSTVGAGDSMVGAMTLKLAE--NASLEEMVRFGVAAGSAATLNQGTR--LCSHDDT 300 (309)
T ss_dssp GCEEEECSS--CEEEECC-CSCCCCCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHTC-------CCCHHHH
T ss_pred CceEEEECC--ceEEEeC-CccccCCCcCcHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHcCcCCC--CCCHHHH
Confidence 999998776 5788999 8889999999999999999999999 9999999999999999999999975 6999999
Q ss_pred chhhhhc
Q psy14735 322 PDNLFSL 328 (340)
Q Consensus 322 ~~~l~~~ 328 (340)
++++.+.
T Consensus 301 ~~~~~~~ 307 (309)
T 3cqd_A 301 QKIYAYL 307 (309)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9988653
No 27
>2f02_A Tagatose-6-phosphate kinase; LACC, structural genomics, PSI, protein structure initiative YORK SGX research center for structural genomics; HET: ATP; 1.90A {Enterococcus faecalis} SCOP: c.72.1.1 PDB: 2awd_A*
Probab=100.00 E-value=2.2e-45 Score=334.88 Aligned_cols=294 Identities=17% Similarity=0.198 Sum_probs=252.3
Q ss_pred CcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCCc
Q psy14735 15 ADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSIN 94 (340)
Q Consensus 15 ~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi~ 94 (340)
|.|+++|++++|+++.+++ |.+|++++.......+||++.|+|++|++||.++.++|.+|+ .+|+.+++.|++ .||+
T Consensus 3 m~i~v~g~~~~D~~~~v~~-~~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~-~~G~~i~~~L~~-~gV~ 79 (323)
T 2f02_A 3 LIVTVTMNPSIDISYLLDH-LKLDTVNRTSQVTKTPGGKGLNVTRVIHDLGGDVIATGVLGG-FHGAFIANELKK-ANIP 79 (323)
T ss_dssp CEEEEESSCEEEEEEECSC-CCTTSEEEESCEEEEEESHHHHHHHHHHHHTCCEEEEEEEEH-HHHHHHHHHHHH-TTCC
T ss_pred eEEEEecCceeEEEEecCC-cccCCEEEeceEEEcCCcHHHHHHHHHHHcCCCeEEEEEecc-chHHHHHHHHHH-CCCc
Confidence 5899999999999999999 789999999899999999999999999999999999999997 589999999999 9999
Q ss_pred ccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHH----hhccCCcEEEEeCCCC----HHHHHHHHHh
Q psy14735 95 TKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAK----NLLLKAKVIMFQGETP----WETTLYCLSK 166 (340)
Q Consensus 95 ~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~----~~~~~~~~v~i~~~~~----~~~~~~~~~~ 166 (340)
++++...+ .|+.++++++++ +++.+...++ .+++++++.+. +.+++++++++++..+ .+...++++.
T Consensus 80 ~~~v~~~~--~t~~~~~~~~~~-~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~ 154 (323)
T 2f02_A 80 QAFTSIKE--ETRDSIAILHEG-NQTEILEAGP--TVSPEEISNFLENFDQLIKQAEIVTISGSLAKGLPSDFYQELVQK 154 (323)
T ss_dssp BCCEEESS--CCEEEEEEEETT-EEEEEEECCC--BCCHHHHHHHHHHHHHHHTTCSEEEEESCCCBTSCTTHHHHHHHH
T ss_pred eeEEEcCC--CCeeEEEEEcCC-CeEEEECCCC--CCCHHHHHHHHHHHHHhccCCCEEEEECCCCCCCChHHHHHHHHH
Confidence 99987653 477777777765 5655444443 57887766432 2468899999988764 3778889999
Q ss_pred chhcccCCceEEEeCCCCCCCCchhhhh---cCcEEEeCHHHHHHhhcCCCC-Ch-hhHHHHHHHHHhcCCCEEEEEecC
Q psy14735 167 LHVSLESRAKIIVNPSPAVYPLNPIVMI---LADIICINEQEAEIITDMKIN-NE-EDLADCMEKLLDMKCNTVIITLGG 241 (340)
Q Consensus 167 a~~~~~~~~~v~~d~~~~~~~~~~~~l~---~~dil~~n~~E~~~l~~~~~~-~~-~~~~~~~~~l~~~g~~~vvvt~G~ 241 (340)
+ ++.+.++++||.+. .+.++++ .+|++++|++|++.|++.... +. +++.++++.|.++|++.++||+|+
T Consensus 155 a---~~~g~~v~~Dp~~~---~~~~~l~~~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~ 228 (323)
T 2f02_A 155 A---HAQEVKVLLDTSGD---SLRQVLQGPWKPYLIKPNLEELEGLLGQDFSENPLAAVQTALTKPMFAGIEWIVISLGK 228 (323)
T ss_dssp H---HHTTCEEEEECCTH---HHHHHHHSSCCCSEECCBHHHHHHHHTCCCCSSCHHHHHHHHTSGGGTTCSEEEEECGG
T ss_pred H---HHCCCEEEEECChH---HHHHHHhccCCCeEEecCHHHHHHHhCCCCCCCcHHHHHHHHHHHHHcCCCEEEEeecC
Confidence 9 88899999999864 2345664 899999999999999997654 44 577788888888899999999999
Q ss_pred CceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCc
Q psy14735 242 SGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKETL 321 (340)
Q Consensus 242 ~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v 321 (340)
+|+++++++ +.+++|+ ++++++||+||||+|.|+|++++++ |+++++|+++|+++|+.++++.|+. .|+++++
T Consensus 229 ~G~~~~~~~--~~~~~~~-~~v~vvdttGAGDaF~a~~~~~l~~--g~~~~~a~~~A~~~aa~~v~~~G~~--~~~~~ev 301 (323)
T 2f02_A 229 DGAIAKHHD--QFYRVKI-PTIQAKNPVGSGDATIAGLAYGLAK--DAPAAELLKWGMAAGMANAQERMTG--HVDVENV 301 (323)
T ss_dssp GCEEEEETT--EEEEEEC-CCCCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHHSSSSS--CCCHHHH
T ss_pred CceEEEeCC--CEEEEcC-CCccccCCccHHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHcCCCcC--CCCHHHH
Confidence 999999876 6888999 8889999999999999999999999 9999999999999999999999984 7999999
Q ss_pred chhhhhcc
Q psy14735 322 PDNLFSLK 329 (340)
Q Consensus 322 ~~~l~~~~ 329 (340)
++++.+..
T Consensus 302 ~~~~~~~~ 309 (323)
T 2f02_A 302 KKHLMNIQ 309 (323)
T ss_dssp HHHHTTCE
T ss_pred HHHhhcEE
Confidence 99886543
No 28
>1v1a_A 2-keto-3-deoxygluconate kinase; ATP, structural genomics, transferase, riken structural genomics/proteomics initiative, RSGI; HET: KDG ADP; 2.1A {Thermus thermophilus} SCOP: c.72.1.1 PDB: 1v19_A* 1v1b_A* 1v1s_A
Probab=100.00 E-value=1.9e-45 Score=333.31 Aligned_cols=286 Identities=18% Similarity=0.268 Sum_probs=242.0
Q ss_pred CcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCCc
Q psy14735 15 ADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSIN 94 (340)
Q Consensus 15 ~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi~ 94 (340)
++|+++|++++|++. |.+++..+.......+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .||+
T Consensus 2 ~~i~viG~~~~D~~~-----~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~D~~g~~i~~~L~~-~gv~ 75 (309)
T 1v1a_A 2 LEVVTAGEPLVALVP-----QEPGHLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRA-EGVD 75 (309)
T ss_dssp CSEEEESCCEEEEEC-----SSSSCGGGCCEEEEEEECHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHHHHHH-HTCB
T ss_pred CcEEEEccceEEEec-----CCCCcccchheeeeecCcHHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHH-cCCC
Confidence 589999999999985 3455566667788899999999999999999999999999999999999999999 9999
Q ss_pred ccceEeeCCCCCceEEEEEcCCCCeEEEEeC--CcCCCCCHHHHHHHHhhccCCcEEEEeCCCC------HHHHHHHHHh
Q psy14735 95 TKYIWLLQDVTTGVCSKVISNKGTHQTNIIP--GANTYLSASDIDAAKNLLLKAKVIMFQGETP------WETTLYCLSK 166 (340)
Q Consensus 95 ~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~------~~~~~~~~~~ 166 (340)
++++.+.++ +|+.+++.++++|++++.++. ++...+++++++. +.+++++++++++..+ .+...++++.
T Consensus 76 ~~~v~~~~~-~t~~~~~~~~~~g~~~~~~~~~~~a~~~~~~~~~~~--~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~~ 152 (309)
T 1v1a_A 76 LTHFRRAPG-FTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDP--DYLEGVRFLHLSGITPALSPEARAFSLWAMEE 152 (309)
T ss_dssp CTTEEECSS-CCCEEEEEECTTSCEEEEEECTTCSGGGCCTTSSCG--GGGTTCSEEEEETTGGGSCHHHHHHHHHHHHH
T ss_pred CceEEEcCC-CCEEEEEEECCCCCceEEEeCCCChhhhCCHhhCCh--hHhcCCCEEEEeCchhccCchHHHHHHHHHHH
Confidence 999987777 999999988888988876554 4455676665543 3478899999987643 3567788888
Q ss_pred chhcccCCceEEEeCCCC--CCC------CchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEE
Q psy14735 167 LHVSLESRAKIIVNPSPA--VYP------LNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIIT 238 (340)
Q Consensus 167 a~~~~~~~~~v~~d~~~~--~~~------~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt 238 (340)
+ ++++.++++|+... .|. .+.++++++|++++|++|++.|++. + .++++ ++|++.|+||
T Consensus 153 a---~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~--~~~~~---~~g~~~vvvt 219 (309)
T 1v1a_A 153 A---KRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGR-----V--EEALR---ALSAPEVVLK 219 (309)
T ss_dssp H---HTTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEEEEHHHHHHHHSS-----H--HHHHH---HTCCSEEEEE
T ss_pred H---HHcCCEEEEeCCCCcccCCHHHHHHHHHHHHHhCCEEECcHHHHHHHhCC-----H--HHHHH---hcCCCEEEEE
Confidence 8 88999999999753 331 3456789999999999999999985 2 34444 6799999999
Q ss_pred ecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCc
Q psy14735 239 LGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDK 318 (340)
Q Consensus 239 ~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~ 318 (340)
+|++|+++ .+++ +.+++|+ ++++++||+||||+|.|+|++++++ |+++++|+++|+++|+.++++.|+.+.+|++
T Consensus 220 ~G~~G~~~-~~~~-~~~~~~~-~~v~vvdttGAGDaf~a~~~~~l~~--g~~~~~a~~~a~~~aa~~v~~~G~~~~~~~~ 294 (309)
T 1v1a_A 220 RGAKGAWA-FVDG-RRVEGSA-FAVEAVDPVGAGDAFAAGYLAGAVW--GLPVEERLRLANLLGASVAASRGDHEGAPYR 294 (309)
T ss_dssp CGGGCEEE-EETT-EEEECCC-CCCCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHTSSTTTTTCCCH
T ss_pred ecCCCeeE-ecCC-cEEEeCC-CCCCcCCCCCchHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHcCCCCCcCCCCH
Confidence 99999998 6532 6788999 8889999999999999999999999 9999999999999999999999998888999
Q ss_pred cCcchhhhh
Q psy14735 319 ETLPDNLFS 327 (340)
Q Consensus 319 ~~v~~~l~~ 327 (340)
+++++++.+
T Consensus 295 ~~v~~~~~~ 303 (309)
T 1v1a_A 295 EDLEVLLKA 303 (309)
T ss_dssp HHHTTCC--
T ss_pred HHHHHHHhh
Confidence 999888754
No 29
>2ajr_A Sugar kinase, PFKB family; TM0828, possible 1-phosphofructokinase (EC 2.7.1.56), struct genomics, joint center for structural genomics, JCSG; HET: MSE; 2.46A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=9.5e-46 Score=338.37 Aligned_cols=296 Identities=18% Similarity=0.201 Sum_probs=255.1
Q ss_pred CCCCcEEEEcccccceeeecCCCCCCCCeeec---CceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHh
Q psy14735 12 KDEADIVVVGSCLVEFITYVQTLPKPEETVKG---YHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELR 88 (340)
Q Consensus 12 ~~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~---~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~ 88 (340)
...+.|+++|++++|+++.+++ |.++++++. ......+||++.|+|++|++||.++.++|.+|+| +|+.+++.|+
T Consensus 10 ~~~~~~~v~G~~~vD~~~~~~~-~~~g~~~~~s~~~~~~~~~GG~~~NvA~~la~LG~~~~~~~~vG~d-~G~~i~~~L~ 87 (331)
T 2ajr_A 10 HHHMVLTVTLNPALDREIFIED-FQVNRLYRINDLSKTQMSPGGKGINVSIALSKLGVPSVATGFVGGY-MGKILVEELR 87 (331)
T ss_dssp --CCEEEEESSCEEEEEEECTT-CCSSCEEECCSGGGEEEEEESHHHHHHHHHHHTTCCEEEEEEEEHH-HHHHHHHHHH
T ss_pred ccceEEEEecchHHeEEEEcCC-ccCCceEEeccccceEEecCcHHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHH
Confidence 3458899999999999999999 789999988 8999999999999999999999999999999998 9999999999
Q ss_pred hhcC--CcccceEeeCCCCCceEEEEEcCCCCe-EEEEeCCcCCCCCHHHHHHH----HhhccCCcEEEEeCCCC----H
Q psy14735 89 KYNS--INTKYIWLLQDVTTGVCSKVISNKGTH-QTNIIPGANTYLSASDIDAA----KNLLLKAKVIMFQGETP----W 157 (340)
Q Consensus 89 ~~~g--i~~~~v~~~~~~~t~~~~i~~~~~g~~-~~~~~~~~~~~~~~~~i~~~----~~~~~~~~~v~i~~~~~----~ 157 (340)
+ .| |+++++...+ .|+.++++++++|++ +.+...++ .+++++++.+ .+.++.++++++++..+ .
T Consensus 88 ~-~g~~V~~~~v~~~~--~t~~~~~~v~~~g~~~~~~~~~g~--~l~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 162 (331)
T 2ajr_A 88 K-ISKLITTNFVYVEG--ETRENIEIIDEKNKTITAINFPGP--DVTDMDVNHFLRRYKMTLSKVDCVVISGSIPPGVNE 162 (331)
T ss_dssp H-HCTTEEEEEEEESS--CCEEEEEEEETTTTEEEEEECCCC--CCCHHHHHHHHHHHHHHHTTCSEEEEESCCCTTSCT
T ss_pred H-cCCccceEEEEcCC--CCeEEEEEEeCCCceEEEEeCCCC--CCCHHHHHHHHHHHHHhcccCCEEEEECCCCCCCCH
Confidence 9 99 9999887653 477777788888888 55443343 5788777653 23468899999998765 3
Q ss_pred HHHHHHHHhchhcccCCceEEEeCCCCCCCCchhhhhc---CcEEEeCHHH-HHHhhcCCCCChhhHHHHHHHHHhcCCC
Q psy14735 158 ETTLYCLSKLHVSLESRAKIIVNPSPAVYPLNPIVMIL---ADIICINEQE-AEIITDMKINNEEDLADCMEKLLDMKCN 233 (340)
Q Consensus 158 ~~~~~~~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~~---~dil~~n~~E-~~~l~~~~~~~~~~~~~~~~~l~~~g~~ 233 (340)
+...++++.+ ++.+.++++|+.+. .+.++++. +|++++|++| ++.+++....+.+++.++++.|+++ ++
T Consensus 163 ~~~~~~~~~a---~~~g~~v~~D~~~~---~~~~~l~~~~~~dil~~N~~E~~~~l~g~~~~~~~~~~~~~~~l~~~-~~ 235 (331)
T 2ajr_A 163 GICNELVRLA---RERGVFVFVEQTPR---LLERIYEGPEFPNVVKPDLRGNHASFLGVDLKTFDDYVKLAEKLAEK-SQ 235 (331)
T ss_dssp THHHHHHHHH---HHTTCEEEEECCHH---HHHHHHHSSCCCSEECCCCTTCCSCBTTBCCCSHHHHHHHHHHHHHH-SS
T ss_pred HHHHHHHHHH---HHcCCEEEEECChH---HHHHHHhcCCCCeEEEeCccchHHHHhCCCCCCHHHHHHHHHHHHHh-cC
Confidence 6788899999 88999999999853 23456664 8999999999 9999987666667888889999988 99
Q ss_pred EEEEEecCCceEEEecCCCceEEEc-cCCCcCcccCCCcchHHHHHHHHHHH-cCCCCCHHHHHHHHHHHHHHHhcccCC
Q psy14735 234 TVIITLGGSGVVYATRDNPRLKTIT-VDHVEYPIESEGVGDCFVGALAYYLC-YFPQLPLGEIILRSCHVARQSLFNVGL 311 (340)
Q Consensus 234 ~vvvt~G~~G~~~~~~~~~~~~~~p-~~~~~~vvdttGaGDaF~ag~~~~l~-~~~g~~~~~a~~~a~~~Aa~~~~~~g~ 311 (340)
.++||+|++|+++++++ ..+++| + ++++++|||||||+|.|||+++++ + |+++++|+++|+++|+.++++.|+
T Consensus 236 ~vvvT~G~~Ga~~~~~~--~~~~~~~~-~~v~vvDttGAGDaF~ag~l~~l~~~--g~~~~~al~~A~a~aa~~v~~~G~ 310 (331)
T 2ajr_A 236 VSVVSYEVKNDIVATRE--GVWLIRSK-EEIDTSHLLGAGDAYVAGMVYYFIKH--GANFLEMAKFGFASALAATRRKEK 310 (331)
T ss_dssp EEEEEETTTEEEEECSS--CEEEEEES-SCCCGGGCTTHHHHHHHHHHHHHHHH--CSCHHHHHHHHHHHHHHHTTSSSC
T ss_pred EEEEeecCCceEEEeCC--cEEEEecC-CcccccCCCchHHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHcCcCc
Confidence 99999999999999776 578889 8 888999999999999999999999 9 999999999999999999999998
Q ss_pred CCCCCCccCcchhhhhc
Q psy14735 312 QNSFPDKETLPDNLFSL 328 (340)
Q Consensus 312 ~~~~~~~~~v~~~l~~~ 328 (340)
. .|+++++++++.+.
T Consensus 311 ~--~~~~~ev~~~~~~~ 325 (331)
T 2ajr_A 311 Y--MPDLEAIKKEYDHF 325 (331)
T ss_dssp C--CCCHHHHHTTGGGE
T ss_pred C--CCCHHHHHHHHhhc
Confidence 4 79999999888653
No 30
>2qcv_A Putative 5-dehydro-2-deoxygluconokinase; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.90A {Bacillus halodurans c-125}
Probab=100.00 E-value=1.6e-45 Score=337.01 Aligned_cols=301 Identities=16% Similarity=0.232 Sum_probs=247.5
Q ss_pred CCCCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhc
Q psy14735 12 KDEADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYN 91 (340)
Q Consensus 12 ~~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~ 91 (340)
+++++|+++|++++|++......|. .........+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .
T Consensus 9 ~~~~~i~viG~~~~D~~~~~~~~~~----~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~l~~~L~~-~ 83 (332)
T 2qcv_A 9 DREFDLIAIGRACIDLNAVEYNRPM----EETMTFSKYVGGSPANIVIGSSKLGLKAGFIGKIADDQHGRFIESYMRG-V 83 (332)
T ss_dssp CCSEEEEEESCCEEEEEESSCSSCG----GGCCCEEEEEESHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHH-T
T ss_pred ccCCcEEEECcceEEEecCCCCCCc----cccceeEecCCCHHHHHHHHHHHcCCceEEEEEeCCCHHHHHHHHHHHH-c
Confidence 3456899999999999986544332 2234677899999999999999999999999999999999999999999 9
Q ss_pred CCcccceEeeC-CCCCceEEEEEcCCCCeEEEEeC--CcCCCCCHHHHHHHHhhccCCcEEEEeCCC-----CHHHHHHH
Q psy14735 92 SINTKYIWLLQ-DVTTGVCSKVISNKGTHQTNIIP--GANTYLSASDIDAAKNLLLKAKVIMFQGET-----PWETTLYC 163 (340)
Q Consensus 92 gi~~~~v~~~~-~~~t~~~~i~~~~~g~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~-----~~~~~~~~ 163 (340)
||+++++.+.+ ..+|+.+++.++.+|++++.++. +++..+++++++.. .+++++++++++.. +.+...++
T Consensus 84 gV~~~~v~~~~~~~~t~~~~v~~~~~g~~~~~~~~~~~a~~~l~~~~~~~~--~~~~~~~v~~~g~~~~~~~~~~~~~~~ 161 (332)
T 2qcv_A 84 GVDTSNLVVDQEGHKTGLAFTEIKSPEECSILMYRQDVADLYLSPEEVNEA--YIRRSKLLLVSGTALSKSPSREAVLKA 161 (332)
T ss_dssp TCBCTTEEECSSCCCCCEEEEEEEETTEEEEEEECTTCGGGGCCGGGCCHH--HHTTEEEEEEEGGGGSSTTHHHHHHHH
T ss_pred CCCCcceEecCCCCCceEEEEEEcCCCCccEEEECCcchhhhCCHhHCCHH--HHccCCEEEEeCccccCchhHHHHHHH
Confidence 99999987664 46899988877777877776554 34567777776542 36789999998753 34778888
Q ss_pred HHhchhcccCCceEEEeCCCC--CCC-------CchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCE
Q psy14735 164 LSKLHVSLESRAKIIVNPSPA--VYP-------LNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNT 234 (340)
Q Consensus 164 ~~~a~~~~~~~~~v~~d~~~~--~~~-------~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~ 234 (340)
++.+ ++++.++++|+... .|. .+..+++++|++++|++|++.|++... .++..++++.|+++|++.
T Consensus 162 ~~~a---~~~g~~v~~D~~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~--~~~~~~~~~~l~~~g~~~ 236 (332)
T 2qcv_A 162 IRLA---KRNDVKVVFELDYRPYSWETPEETAVYYSLVAEQSDIVIGTREEFDVLENRTE--KGDNDETIRYLFKHSPEL 236 (332)
T ss_dssp HHHH---HHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHHHCSEEEEEHHHHHHHTTCSS--CCCHHHHHHHHTTSSCSE
T ss_pred HHHH---HHCCCEEEEcCcCchhhcCCHHHHHHHHHHHHHhCCEEEccHHHHHHHhCCCc--CCCHHHHHHHHHHcCCCE
Confidence 9999 88899999999753 221 234578999999999999999998743 134567788888899999
Q ss_pred EEEEecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCC
Q psy14735 235 VIITLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNS 314 (340)
Q Consensus 235 vvvt~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~ 314 (340)
++||+|++|++++++++ +.+++|+ ++++++||+||||+|.|+|++++++ |+++++|+++|+++|+.++++.|+.+.
T Consensus 237 vvvt~G~~G~~~~~~~~-~~~~~~~-~~v~vvdt~GAGDaf~a~~~~~l~~--g~~~~~a~~~A~~~aa~~v~~~G~~~~ 312 (332)
T 2qcv_A 237 IVIKHGVEGSFAYTKAG-EAYRGYA-YKTKVLKTFGAGDSYASAFLYALIS--GKGIETALKYGSASASIVVSKHSSSDA 312 (332)
T ss_dssp EEEECGGGCEEEEETTS-CEEEECC-BCCCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHHC-----C
T ss_pred EEEEECCcceEEEecCC-ceEEcCC-CCccccCCCCcHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHccCCCccC
Confidence 99999999999998732 6888999 8889999999999999999999999 999999999999999999999999888
Q ss_pred CCCccCcchhhhhc
Q psy14735 315 FPDKETLPDNLFSL 328 (340)
Q Consensus 315 ~~~~~~v~~~l~~~ 328 (340)
+|+++++++++.+.
T Consensus 313 ~p~~~ev~~~l~~~ 326 (332)
T 2qcv_A 313 MPSVEEIEALIEKD 326 (332)
T ss_dssp CCCHHHHHHHHHHT
T ss_pred CCCHHHHHHHHhcC
Confidence 99999999998753
No 31
>2hlz_A Ketohexokinase; non-protein kinase, creatine kinase, fructokinase, isoform A, structural genomics, structural genomics consortium, SGC transferase; 1.85A {Homo sapiens} PDB: 2hqq_A 2hw1_A* 3nbv_A* 3nbw_A* 3nc2_A* 3nc9_A* 3nca_A* 3q92_A* 3qa2_A* 3qai_A* 3ro4_A* 3b3l_A
Probab=100.00 E-value=1.1e-44 Score=328.70 Aligned_cols=289 Identities=16% Similarity=0.256 Sum_probs=242.4
Q ss_pred cccccCCCCCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHH
Q psy14735 6 HCVANLKDEADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLE 85 (340)
Q Consensus 6 ~~~~~~~~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~ 85 (340)
|++.-.|++++|+++|++++|+++.++++|.+++.++.......+||++.|+|++|++||.++.++|.+|+|.+|+.+++
T Consensus 9 ~~~~~~~~~~~i~viG~~~iD~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~v~~ig~vG~D~~G~~l~~ 88 (312)
T 2hlz_A 9 HSSGLVPRGSQILCVGLVVLDVISLVDKYPKEDSEIRCLSQRWQRGGNASNSCTILSLLGAPCAFMGSMAPGHVADFVLD 88 (312)
T ss_dssp --------CCEEEEESCCEEEEEEEESSCCCTTCEEECSEEEEEEESHHHHHHHHHHHHTCCEEEEEEECSSHHHHHHHH
T ss_pred cccCCCCCCCcEEEECcceEEEeeccccCCCccceeecccceeccCccHHHHHHHHHHcCCceEEEEEecCchHHHHHHH
Confidence 34555677889999999999999999999999988888888899999999999999999999999999999999999999
Q ss_pred HHhhhcCCcccceEeeCCCCCceEEEEEc-CCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEEEEeCCCCHHHHHHHH
Q psy14735 86 ELRKYNSINTKYIWLLQDVTTGVCSKVIS-NKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVIMFQGETPWETTLYCL 164 (340)
Q Consensus 86 ~l~~~~gi~~~~v~~~~~~~t~~~~i~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~ 164 (340)
.|++ .||+++++...++.+|+.++++++ ++|+|+++.+.++...+++++++.. .+++++++++++.. ++...+++
T Consensus 89 ~L~~-~GV~~~~v~~~~~~~T~~~~~~v~~~~g~r~~~~~~~~~~~~~~~~~~~~--~l~~~~~v~~~~~~-~~~~~~~~ 164 (312)
T 2hlz_A 89 DLRR-YSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYDRSLPDVSATDFEKV--DLTQFKWIHIEGRN-ASEQVKML 164 (312)
T ss_dssp HHHH-TTCBCTTEEECSSCCCCEEEEEEETTTCCEEEEEECCCCCCCCHHHHHTS--CGGGEEEEEEECSS-HHHHHHHH
T ss_pred HHHH-cCCCCccceeccCCCCCeEEEEEECCCCceEEEecCCccccCCHHHhhHh--hhccCCEEEEeccC-HHHHHHHH
Confidence 9999 999999987765667888877776 4799998877777788888887642 46789999999874 46677788
Q ss_pred HhchhcccC--------CceEEEeCCCCCCCCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCC--CE
Q psy14735 165 SKLHVSLES--------RAKIIVNPSPAVYPLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKC--NT 234 (340)
Q Consensus 165 ~~a~~~~~~--------~~~v~~d~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~--~~ 234 (340)
+.+ ++. +.++++|+... ++.+.++++++|++++|++|++.+ +. ++..++++.+.+... +.
T Consensus 165 ~~a---~~~~~~~~~~~~~~v~~d~~~~-~~~~~~~l~~~dil~~n~~ea~~l-g~-----~~~~~~~~~l~~~~~~g~~ 234 (312)
T 2hlz_A 165 QRI---DAHNTRQPPEQKIRVSVEVEKP-REELFQLFGYGDVVFVSKDVAKHL-GF-----QSAEEALRGLYGRVRKGAV 234 (312)
T ss_dssp HHH---HHHHTTSCGGGCCEEEEEECSC-CGGGGGGGGSSSEEEECHHHHHHT-TC-----CSHHHHHHHHGGGSCTTCE
T ss_pred HHH---HHhcccccCCCCeEEEEEcccc-hHHHHHHHhcCCEEEEcHHHHHHc-CC-----CCHHHHHHHHHHhcCCCCE
Confidence 887 554 67899998764 345678899999999999999987 54 356667777776543 89
Q ss_pred EEEEecCCceEEEecCCCceEEEccCCC-cCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCC
Q psy14735 235 VIITLGGSGVVYATRDNPRLKTITVDHV-EYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQ 312 (340)
Q Consensus 235 vvvt~G~~G~~~~~~~~~~~~~~p~~~~-~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~ 312 (340)
|+||+|++|+++++.++ +.+++|+ ++ ++++||+||||+|.|+|++++++ |+++++|+++|+++|+.++++.|+.
T Consensus 235 vvvt~G~~G~~~~~~~~-~~~~~~~-~~~~~vvdt~GAGDaf~a~~~~~l~~--g~~~~~a~~~a~~~aa~~v~~~G~~ 309 (312)
T 2hlz_A 235 LVCAWAEEGADALGPDG-KLLHSDA-FPPPRVVDTLGAGDTFNASVIFSLSQ--GRSVQEALRFGCQVAGKKCGLQGFD 309 (312)
T ss_dssp EEEECGGGCEEEECTTC-CEEEECC-CCCSSCCCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHTSSSSG
T ss_pred EEEEecccCeEEEccCC-CEEECCC-CCCCCcccCCCchHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHhhcCcc
Confidence 99999999999987543 5778888 54 58999999999999999999999 9999999999999999999999863
No 32
>4e84_A D-beta-D-heptose 7-phosphate kinase; LPS-heptose biosynthesis, beta-clAsp dimerization region, PF carbohydrate kinase, phosphorylation; HET: MSE ANP M7B GMZ; 2.60A {Burkholderia cenocepacia} PDB: 4e8w_A* 4e8y_A* 4e8z_A*
Probab=100.00 E-value=1.6e-45 Score=339.20 Aligned_cols=294 Identities=17% Similarity=0.217 Sum_probs=242.2
Q ss_pred CCCCCcEEEEcccccceeee--cCCC-CC-CCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHH
Q psy14735 11 LKDEADIVVVGSCLVEFITY--VQTL-PK-PEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEE 86 (340)
Q Consensus 11 ~~~~~~I~viG~~~iD~~~~--~~~~-~~-~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~ 86 (340)
.|++++|+|+|+.++|.+.. ++++ |. |............+||+ .|+|++|++||.++.++|.+|+|.+|+.+++.
T Consensus 50 ~~~~~~ilvvG~~~~D~~~~g~v~r~~p~~p~~~~~~~~~~~~~GG~-~NvA~~la~LG~~v~~ig~vG~D~~G~~i~~~ 128 (352)
T 4e84_A 50 QLARSRVLVVGDVMLDRYWFGNVDRISPEAPVPVVHVQRQEERLGGA-ANVARNAVTLGGQAGLLCVVGCDEPGERIVEL 128 (352)
T ss_dssp HHTTCEEEEEECEEEEEEEEEEEEEECSSSSSEEEEEEEEEEEEEEH-HHHHHHHHHTTCEEEEEEEEESSHHHHHHHHH
T ss_pred hcCCCcEEEECccceEEEEeecccccCCCCCcceEEeeEEEEecChH-HHHHHHHHHcCCCEEEEEEeCCChhHHHHHHH
Confidence 46678999999999999886 4433 11 23356667888899998 79999999999999999999999999999999
Q ss_pred HhhhcCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeC-CcCCCCCHHHHHHHHhhccCCcEEEEeCC--CCHHHHHHH
Q psy14735 87 LRKYNSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIP-GANTYLSASDIDAAKNLLLKAKVIMFQGE--TPWETTLYC 163 (340)
Q Consensus 87 l~~~~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~v~i~~~--~~~~~~~~~ 163 (340)
|++ .||++. +...++.+|+.+++.+++++++..+... +++....++.++...+.+++++++++++. .+.+...++
T Consensus 129 L~~-~GV~~~-~~~~~~~~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~~~~~~~~~ 206 (352)
T 4e84_A 129 LGS-SGVTPH-LERDPALPTTIKLRVLARQQQLLRVDFEAMPTHEVLLAGLARFDVLLPQHDVVLMSDYAKGGLTHVTTM 206 (352)
T ss_dssp HTT-TSCEEE-EEEETTSCCCEEEEEEESSCEEEEEEECCCCCHHHHHHHHHHHHHHGGGCSEEEEECCSSSSCSSHHHH
T ss_pred HHH-cCCcee-eEECCCCCCceEEEEEcCCceEEEEEcCCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCHHHHHHH
Confidence 999 999994 5455677999999888865554433332 22222223333444456889999999842 333457888
Q ss_pred HHhchhcccCCceEEEeCCCCCCCCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHh-cCCCEEEEEecCC
Q psy14735 164 LSKLHVSLESRAKIIVNPSPAVYPLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLD-MKCNTVIITLGGS 242 (340)
Q Consensus 164 ~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~-~g~~~vvvt~G~~ 242 (340)
++.+ ++++.++++|+.+..+ .+++.+|++++|++|++.+++ ...+.+++.++++.|.+ .|++.|+||+|++
T Consensus 207 ~~~a---~~~g~~v~~D~~~~~~----~~l~~~dil~pN~~Ea~~l~g-~~~~~~~~~~~a~~l~~~~g~~~VvvT~G~~ 278 (352)
T 4e84_A 207 IEKA---RAAGKAVLVDPKGDDW----ARYRGASLITPNRAELREVVG-QWKSEDDLRARVANLRAELDIDALLLTRSEE 278 (352)
T ss_dssp HHHH---HHTTCEEEEECCSSCC----STTTTCSEECCBHHHHHHHHC-CCSSHHHHHHHHHHHHHHHTCSEEEEECGGG
T ss_pred HHHH---HhcCCEEEEECCCcch----hhccCCcEEcCCHHHHHHHhC-CCCCHHHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 9999 8999999999987644 578899999999999999999 55566788889999985 6999999999999
Q ss_pred ceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCcc
Q psy14735 243 GVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKETLP 322 (340)
Q Consensus 243 G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~ 322 (340)
|+++++++ +.+++|+ ++++++||+||||+|.|||++++++ |+++++|+++|+++|+++|++.|+.+ |++++|+
T Consensus 279 Ga~~~~~~--~~~~~pa-~~v~vvDttGAGDaF~ag~l~~l~~--g~~l~~al~~A~aaaa~~v~~~Ga~~--~t~~el~ 351 (352)
T 4e84_A 279 GMTLFSAG--GELHAPA-LAREVFDVSGAGDTVIATVATMLGA--GVPLVDAVVLANRAAGIVVGKLGTAT--VDYDELF 351 (352)
T ss_dssp CEEEEETT--EEEEECC-CCSCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHTSSSSCC--CCHHHHT
T ss_pred cEEEEECC--ceEEecC-CCcCccCCccccHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhcCCCCcc--CCHHHhc
Confidence 99999876 7889999 8899999999999999999999999 99999999999999999999999875 6777765
No 33
>2pkf_A Adenosine kinase; transferase, S genomics, TB structural genomics consortium, TBSGC; 1.50A {Mycobacterium tuberculosis} PDB: 2pkk_A* 2pkm_A* 2pkn_A*
Probab=100.00 E-value=3.6e-46 Score=341.55 Aligned_cols=295 Identities=18% Similarity=0.157 Sum_probs=251.3
Q ss_pred CcEEEEcccccceeeec----------CCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHH
Q psy14735 15 ADIVVVGSCLVEFITYV----------QTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYL 84 (340)
Q Consensus 15 ~~I~viG~~~iD~~~~~----------~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~ 84 (340)
++|+++|++++|+++.+ +++|..+++.........+||++.|+|++|++||.++.++|.+|+| +|+ ++
T Consensus 11 m~i~v~G~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~g~-i~ 88 (334)
T 2pkf_A 11 MTIAVTGSIATDHLMRFPGRFSEQLLPEHLHKVSLSFLVDDLVMHRGGVAGNMAFAIGVLGGEVALVGAAGAD-FAD-YR 88 (334)
T ss_dssp SEEEEESCCEEEEEEECSSCTHHHHTTSCGGGCCCCCCCSEEEEEEECHHHHHHHHHHHTTCEEEEECEECGG-GHH-HH
T ss_pred CeEEEECChhheEEEecChHHhhhhchhhccccccccccccceecCCChHHHHHHHHHHcCCCeEEEEEEeCc-hHH-HH
Confidence 58999999999999988 7888888877777888999999999999999999999999999999 899 99
Q ss_pred HHHhhhcCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEEEEeCCCCHHHHHHHH
Q psy14735 85 EELRKYNSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVIMFQGETPWETTLYCL 164 (340)
Q Consensus 85 ~~l~~~~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~ 164 (340)
+.|++ .||+++++.+.++.+|+.+++.++++|++++..++++...+++++++.....+++++++++++.. ++...+++
T Consensus 89 ~~L~~-~gV~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~~~~l~~~~~v~~~~~~-~~~~~~~~ 166 (334)
T 2pkf_A 89 DWLKA-RGVNCDHVLISETAHTARFTCTTDVDMAQIASFYPGAMSEARNIKLADVVSAIGKPELVIIGAND-PEAMFLHT 166 (334)
T ss_dssp HHHHT-TTEECTTCEECSSCCCEEEEEEECTTCCEEEEEECGGGGGGGGCCHHHHHHHHCSCSEEEEESCC-HHHHHHHH
T ss_pred HHHHH-CCCceeeeEecCCCCceEEEEEEcCCCCEEEEECCchhhhCCHhhcChhhhhhcCCCEEEEcCCC-hHHHHHHH
Confidence 99999 99999999877778999999999988998887677666666666665543346899999998875 47788889
Q ss_pred HhchhcccCCceEEEeCCCC--CC--CCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEec
Q psy14735 165 SKLHVSLESRAKIIVNPSPA--VY--PLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLG 240 (340)
Q Consensus 165 ~~a~~~~~~~~~v~~d~~~~--~~--~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G 240 (340)
+.+ ++++.++++|+... .| +.+..+++++|++++|++|++.+++....+ . +.+.+. ++.|+||+|
T Consensus 167 ~~a---~~~g~~v~~D~~~~~~~~~~~~l~~~l~~~dil~~N~~E~~~l~g~~~~~---~----~~l~~~-~~~vvvt~G 235 (334)
T 2pkf_A 167 EEC---RKLGLAFAADPSQQLARLSGEEIRRLVNGAAYLFTNDYEWDLLLSKTGWS---E----ADVMAQ-IDLRVTTLG 235 (334)
T ss_dssp HHH---HHHTCCEEEECGGGGGTSCHHHHHTTTTTCSEEEEEHHHHHHHHHHHCCC---H----HHHHTT-CSCEEEECG
T ss_pred HHH---HhcCCeEEEeccchhhhhhHHHHHHHHhcCCEEecCHHHHHHHhccCCCC---H----HHHHhc-CCEEEEEeC
Confidence 998 88899999999643 12 223567889999999999999998753222 1 224443 889999999
Q ss_pred CCceEEEecCCCceEEEccCCCcC-cccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCcc
Q psy14735 241 GSGVVYATRDNPRLKTITVDHVEY-PIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKE 319 (340)
Q Consensus 241 ~~G~~~~~~~~~~~~~~p~~~~~~-vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~ 319 (340)
++|++++++++ +.+++|+ ++++ ++||+||||+|.|||++++++ |+++++|+++|+++|+.++++.|+.+..|+++
T Consensus 236 ~~G~~~~~~~~-~~~~~~~-~~v~~vvDttGAGDaF~a~~~~~l~~--g~~~~~a~~~A~~~aa~~v~~~G~~~~~p~~~ 311 (334)
T 2pkf_A 236 PKGVDLVEPDG-TTIHVGV-VPETSQTDPTGVGDAFRAGFLTGRSA--GLGLERSAQLGSLVAVLVLESTGTQEWQWDYE 311 (334)
T ss_dssp GGCEEEECTTS-CEEEECC-CCCSCCCCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHTSSSSSCCCCCHH
T ss_pred CCCeEEEeCCC-cEEEeCC-cCCCCCCCCCCchHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHhCCCCCcCCCCHH
Confidence 99999987762 2788999 7876 789999999999999999999 99999999999999999999999998899999
Q ss_pred Ccchhhhhc
Q psy14735 320 TLPDNLFSL 328 (340)
Q Consensus 320 ~v~~~l~~~ 328 (340)
++++++.+.
T Consensus 312 ev~~~l~~~ 320 (334)
T 2pkf_A 312 AAASRLAGA 320 (334)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998753
No 34
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=100.00 E-value=2.6e-45 Score=334.06 Aligned_cols=293 Identities=19% Similarity=0.185 Sum_probs=249.1
Q ss_pred CcEEEEcccccce-eeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCC
Q psy14735 15 ADIVVVGSCLVEF-ITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSI 93 (340)
Q Consensus 15 ~~I~viG~~~iD~-~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi 93 (340)
|-+.|.+|+++|+ ++.++++ .+|++++.......+||++.|+|++|++||.++.++|.+|+| +|+.+++.|++ .||
T Consensus 3 mi~tvt~np~iD~~~~~v~~~-~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~d-~g~~i~~~l~~-~gv 79 (320)
T 3ie7_A 3 LIYTITLNPAIDRLLFIRGEL-EKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSD-NLDKLYAILKE-KHI 79 (320)
T ss_dssp CEEEEESSCEEEEEEEESSSC-CTTSCCCCSEEEEEEESHHHHHHHHHHHHTCCEEEEEEEEST-THHHHHHHHHH-TTC
T ss_pred eEEEEecchHHeeeEEEcCCc-cCCCeeEeceeeecCCchHHHHHHHHHHcCCCeEEEEEecCc-hHHHHHHHHHH-cCC
Confidence 3455668999999 9999998 889999999999999999999999999999999999999998 99999999999 999
Q ss_pred cccceEeeCCCCCceEEEEEcCCCC--eEEEEeCCcCCCCCHHHHHHH----HhhccCCcEEEEeCCCC----HHHHHHH
Q psy14735 94 NTKYIWLLQDVTTGVCSKVISNKGT--HQTNIIPGANTYLSASDIDAA----KNLLLKAKVIMFQGETP----WETTLYC 163 (340)
Q Consensus 94 ~~~~v~~~~~~~t~~~~i~~~~~g~--~~~~~~~~~~~~~~~~~i~~~----~~~~~~~~~v~i~~~~~----~~~~~~~ 163 (340)
+++++....+ +|+.++++++ +|+ |+++...+ ..+++++++.+ .+.+++++++++++..+ .+...++
T Consensus 80 ~~~~v~~~~~-~t~~~~~~~~-~g~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~ 155 (320)
T 3ie7_A 80 NHDFLVEAGT-STRECFVVLS-DDTNGSTMIPEAG--FTVSQTNKDNLLKQIAKKVKKEDMVVIAGSPPPHYTLSDFKEL 155 (320)
T ss_dssp CBCCEEETTC-CCEEEEEEEE-TTCSCCEEEECCC--CCCCHHHHHHHHHHHHHHCCTTCEEEEESCCCTTCCHHHHHHH
T ss_pred ceEEEEecCC-CCceEEEEEE-CCCceeEEEeCCC--CCCCHHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHH
Confidence 9999844444 8999998888 788 77765444 46788777653 24578999999987654 4788999
Q ss_pred HHhchhcccCCceEEEeCCCCCCCCchhhhh-cCcEEEeCHHHHHHhhcCCCC-ChhhHHHHHHHHHhcCCCEEEEEecC
Q psy14735 164 LSKLHVSLESRAKIIVNPSPAVYPLNPIVMI-LADIICINEQEAEIITDMKIN-NEEDLADCMEKLLDMKCNTVIITLGG 241 (340)
Q Consensus 164 ~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~-~~dil~~n~~E~~~l~~~~~~-~~~~~~~~~~~l~~~g~~~vvvt~G~ 241 (340)
++.+ ++.+.++++|+.+. .+...+. .+|++++|++|++.|+|.... +.++ +..+.+. ++.++||+|+
T Consensus 156 ~~~a---~~~g~~v~~D~~~~---~l~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~----~~~~~~~-~~~vvvt~G~ 224 (320)
T 3ie7_A 156 LRTV---KATGAFLGCDNSGE---YLNLAVEMGVDFIKPNEDEVIAILDEKTNSLEEN----IRTLAEK-IPYLVVSLGA 224 (320)
T ss_dssp HHHH---HHHTCEEEEECCHH---HHHHHHHHCCSEECCBTTGGGGGSCTTCCCHHHH----HHHHTTT-CSEEEEECGG
T ss_pred HHHH---HhcCCEEEEECChH---HHHHHHhcCCeEEeeCHHHHHHHhCCCcCCCHHH----HHHHHhh-CCEEEEEcCC
Confidence 9999 88899999999753 2345554 899999999999999997543 2222 2333333 8999999999
Q ss_pred CceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCc
Q psy14735 242 SGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKETL 321 (340)
Q Consensus 242 ~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v 321 (340)
+|+++++++ +.+++|+ ++++++||+||||+|.|||++++++ |+++++|+++|+++|+.+|++.|+ ..|+++++
T Consensus 225 ~G~~~~~~~--~~~~~~~-~~v~vvdttGAGDaF~ag~~~~l~~--g~~~~~a~~~A~a~aa~~v~~~G~--~~~~~~ev 297 (320)
T 3ie7_A 225 KGSICAHNG--KLYQVIP-PKVQERNDTGAGDVFVGAFIAGLAM--NMPITETLKVATGCSASKVMQQDS--SSFDLEAA 297 (320)
T ss_dssp GCEEEEETT--EEEEEEC-CCCCCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHTSSSS--SCCCHHHH
T ss_pred CceEEEeCC--cEEEEeC-CccCCCCCcCchHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHhCcCC--CCCCHHHH
Confidence 999999887 6889999 8899999999999999999999999 999999999999999999999994 68999999
Q ss_pred chhhhhccccc
Q psy14735 322 PDNLFSLKCEL 332 (340)
Q Consensus 322 ~~~l~~~~~~~ 332 (340)
++++.+.+-+.
T Consensus 298 ~~~~~~~~i~~ 308 (320)
T 3ie7_A 298 GKLKNQVSIIQ 308 (320)
T ss_dssp HHHGGGCEEEE
T ss_pred HHHhhCeEEEE
Confidence 99998766554
No 35
>3lhx_A Ketodeoxygluconokinase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.87A {Shigella flexneri}
Probab=100.00 E-value=1.9e-45 Score=334.74 Aligned_cols=280 Identities=15% Similarity=0.225 Sum_probs=234.8
Q ss_pred CcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcC----CceeEEEEecCChhhHHHHHHHhhh
Q psy14735 15 ADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLR----ASVALISKLGNDKFGKSYLEELRKY 90 (340)
Q Consensus 15 ~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG----~~v~~~~~vG~D~~g~~i~~~l~~~ 90 (340)
++|+|+|++++|++.. + ......+||++.|+|++|++|| .++.++|.+|+|.+|+.+++.|++
T Consensus 5 ~~i~viG~~~~D~~~~------~------~~~~~~~GG~~~NvA~~la~LG~~~~~~~~~ig~vG~D~~G~~l~~~L~~- 71 (319)
T 3lhx_A 5 KKIAVIGECMIELSEK------G------ADVKRGFGGDTLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHG- 71 (319)
T ss_dssp EEEEEESCCEEEEEC---------------CCEEEEECHHHHHHHHHHTTSCTTTEEEEEECEECSSHHHHHHHHHHHT-
T ss_pred CceeeechhhhhhccC------C------CceEEecCChHHHHHHHHHHcCCCCCCcEEEEEEeCCCHHHHHHHHHHHH-
Confidence 6899999999999752 1 2567789999999999999999 899999999999999999999999
Q ss_pred cCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCc---CCCCCHHHHHHHHhhccCCcEEEEeCCC-------CHHHH
Q psy14735 91 NSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGA---NTYLSASDIDAAKNLLLKAKVIMFQGET-------PWETT 160 (340)
Q Consensus 91 ~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~v~i~~~~-------~~~~~ 160 (340)
.||+++++.+.++.+|+.+++.++++|+|++..+++. +..+++.+++...+.+++++++++++.. +.+.+
T Consensus 72 ~GV~~~~v~~~~~~~T~~~~i~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~g~~~~~l~~~~~~~~ 151 (319)
T 3lhx_A 72 ENVDTSLTQRMENRLPGLYYIETDSTGERTFYYWRNEAAAKFWLASEQSAAICEELANFDYLYLSGISLAILSPTSREKL 151 (319)
T ss_dssp TTEECTTCEECTTCCCCEEEEEC----CCEEEEECTTCGGGGTTSSSSHHHHHHHHTTCSEEEEEHHHHHTSCHHHHHHH
T ss_pred cCCCcceEEEcCCCCceEEEEEeCCCCCeeEEEecCCCHHHhccCccchhhHHHHhcCCCEEEEcCchhhhcCchhHHHH
Confidence 9999999988877899999998988999998877653 3456666666655678999999998632 23677
Q ss_pred HHHHHhchhcccCCceEEEeCCCC--CC-------CCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcC
Q psy14735 161 LYCLSKLHVSLESRAKIIVNPSPA--VY-------PLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMK 231 (340)
Q Consensus 161 ~~~~~~a~~~~~~~~~v~~d~~~~--~~-------~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g 231 (340)
.++++.+ ++++.++++||... .| +.+..+++.+|++++|++|++.++|. ++..++++.|.++|
T Consensus 152 ~~~~~~a---~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~di~~~n~~E~~~l~g~-----~~~~~~~~~l~~~g 223 (319)
T 3lhx_A 152 LSLLREC---RAKGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDALWGQ-----QPVEDVIARTHNAG 223 (319)
T ss_dssp HHHHHHH---HHTTCEEEEECCCCGGGSSCHHHHHHHHHHHHTTCSEEEEEHHHHHHHHCC-----CCHHHHHHHHHHTT
T ss_pred HHHHHHH---HhcCCEEEEeCcCCcccccCHHHHHHHHHHHHhhCCcccCCHHHHHHHhCC-----CCHHHHHHHHHhcC
Confidence 8889999 88999999999743 22 13457889999999999999999987 57788899999999
Q ss_pred CCEEEEEecCCceEEEecCCCceEEEccCC---CcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcc
Q psy14735 232 CNTVIITLGGSGVVYATRDNPRLKTITVDH---VEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFN 308 (340)
Q Consensus 232 ~~~vvvt~G~~G~~~~~~~~~~~~~~p~~~---~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~ 308 (340)
++.|+||+|++|++++++++ ..+++|+ + +++++||+||||+|.|+|++++++ |+++++|+++|+++|+.++++
T Consensus 224 ~~~vvvt~G~~G~~~~~~~~-~~~~~~~-~~~~~~~vvdttGAGDaf~a~~~~~l~~--g~~~~~a~~~A~~~aa~~v~~ 299 (319)
T 3lhx_A 224 VKEVVVKRGADSCLVSIAGE-ALVDVPA-VKLPKEKVIDTTAAGDSFSAGYLAVRLT--GGSAENAAKRGHLTASTVIQY 299 (319)
T ss_dssp CSEEEEEETTEEEEEEETTS-CCEEECC-CCCCGGGCCCCTTHHHHHHHHHHHHHTT--TCCHHHHHHHHHHHHHHHTTS
T ss_pred CCEEEEEECCCCeEEEECCc-ceEEccc-ccCCCCccCCCCCccHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHhhhcc
Confidence 99999999999999998763 3458888 5 568999999999999999999999 999999999999999999999
Q ss_pred cCCCCCCCCccCc
Q psy14735 309 VGLQNSFPDKETL 321 (340)
Q Consensus 309 ~g~~~~~~~~~~v 321 (340)
.|+.+ |+....
T Consensus 300 ~Ga~~--~~~~~~ 310 (319)
T 3lhx_A 300 RGAII--PREAMP 310 (319)
T ss_dssp SSSSC--CGGGCC
T ss_pred CCCcC--CCCCCc
Confidence 99864 544433
No 36
>1tyy_A Putative sugar kinase; ribokinase fold, alpha/beta, transferase; 2.60A {Salmonella typhimurium LT2} SCOP: c.72.1.1 PDB: 1tz3_A* 1tz6_A*
Probab=100.00 E-value=2.4e-46 Score=343.36 Aligned_cols=288 Identities=22% Similarity=0.303 Sum_probs=236.0
Q ss_pred CCCCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhc
Q psy14735 12 KDEADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYN 91 (340)
Q Consensus 12 ~~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~ 91 (340)
|+|++|+++|++++|++... .......+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .
T Consensus 22 ~~m~~ilviG~~~~D~~~~~-----------~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~G~~i~~~L~~-~ 89 (339)
T 1tyy_A 22 KAMNKVWVIGDASVDLVPEK-----------QNSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQD-N 89 (339)
T ss_dssp ---CCEEEESCCEEEEEECS-----------SSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHT-T
T ss_pred cccCCEEEECcceeEEeccC-----------CCceEEcCCCHHHHHHHHHHHcCCCeEEEEeeCCCHHHHHHHHHHHH-c
Confidence 33568999999999998732 23566789999999999999999999999999999999999999999 9
Q ss_pred CCcccceEeeCCCCCceEEEEEcCCCCeEEEEeC--CcCCCCCHHHHHHHHhhccCCcEEEEeCC-----CCHHHHHHHH
Q psy14735 92 SINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIP--GANTYLSASDIDAAKNLLLKAKVIMFQGE-----TPWETTLYCL 164 (340)
Q Consensus 92 gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~v~i~~~-----~~~~~~~~~~ 164 (340)
||+++++.+.++.+|+.+++.++++|+|++.++. +++..++++. .+.+++++++++++. .+.+.+.+++
T Consensus 90 gVd~~~v~~~~~~~T~~~~v~~~~~g~r~~~~~~~~~a~~~l~~~~----~~~l~~~~~v~~~~~~l~~~~~~~~~~~~~ 165 (339)
T 1tyy_A 90 GVDVTFLRLDADLTSAVLIVNLTADGERSFTYLVHPGADTYVSPQD----LPPFRQYEWFYFSSIGLTDRPAREACLEGA 165 (339)
T ss_dssp TEECTTEEECTTSCCCEEEEC-------CEEECCSSCGGGGCCGGG----CCCCCTTCEEEEEHHHHSSHHHHHHHHHHH
T ss_pred CCCchheEecCCCCCeEEEEEEcCCCCeEEEEecCCChhhhCCcch----hhHhccCCEEEEcchhhcCcccHHHHHHHH
Confidence 9999999887778999999888888988876554 4555565542 234788999999753 2346678888
Q ss_pred HhchhcccCCceEEEeCCCC--CCC-------CchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEE
Q psy14735 165 SKLHVSLESRAKIIVNPSPA--VYP-------LNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTV 235 (340)
Q Consensus 165 ~~a~~~~~~~~~v~~d~~~~--~~~-------~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~v 235 (340)
+.+ ++.+.++++||... +|. .+.++++.+|++++|++|++.|++. +++.++++.|.+.|++.|
T Consensus 166 ~~a---~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~Ea~~l~g~-----~~~~~~~~~l~~~g~~~V 237 (339)
T 1tyy_A 166 RRM---REAGGYVLFDVNLRSKMWGNTDEIPELIARSAALASICKVSADELCQLSGA-----SHWQDARYYLRDLGCDTT 237 (339)
T ss_dssp HHH---HHTTCEEEEECCCCGGGCSCGGGHHHHHHHHHHHCSEEEEEHHHHHHHHCC-----SSGGGGSSTTGGGTCSCE
T ss_pred HHH---HHcCCEEEEeCCCCccccCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhCC-----CCHHHHHHHHHHcCCCEE
Confidence 888 88899999999743 221 2346788999999999999999987 344566677778899999
Q ss_pred EEEecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCC-----CCHHHHHHHHHHHHHHHhcccC
Q psy14735 236 IITLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQ-----LPLGEIILRSCHVARQSLFNVG 310 (340)
Q Consensus 236 vvt~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g-----~~~~~a~~~a~~~Aa~~~~~~g 310 (340)
+||+|++|+++++++ +.+++|+ ++++++||+||||+|.|+|++++++ | +++++|+++|+++|+.++++.|
T Consensus 238 vvT~G~~G~~~~~~~--~~~~~~~-~~v~vvDttGAGDaF~ag~~~~l~~--g~~~~~~~l~~a~~~A~a~aa~~v~~~G 312 (339)
T 1tyy_A 238 IISLGADGALLITAE--GEFHFPA-PRVDVVDTTGAGDAFVGGLLFTLSR--ANCWDHALLAEAISNANACGAMAVTAKG 312 (339)
T ss_dssp EEECGGGCEEEESSS--CEEEECC-CCCCCSCCTTHHHHHHHHHHHHHTT--SSSCCHHHHHHHHHHHHHHHHHGGGSSS
T ss_pred EEEECCCceEEEeCC--ceEEcCC-CCCCcCCCCCchHHHHHHHHHHHHh--ccccccccHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999776 6888999 8889999999999999999999999 8 8999999999999999999999
Q ss_pred CCCCCCCccCcchhhhhc
Q psy14735 311 LQNSFPDKETLPDNLFSL 328 (340)
Q Consensus 311 ~~~~~~~~~~v~~~l~~~ 328 (340)
+.+.+|+++++++++.+.
T Consensus 313 ~~~~~p~~~ev~~~l~~~ 330 (339)
T 1tyy_A 313 AMTALPFPDQLNTFLSSH 330 (339)
T ss_dssp TTTTCCCHHHHHHHHC--
T ss_pred CCCCCCCHHHHHHHHhcC
Confidence 988899999999988653
No 37
>3b1n_A Ribokinase, putative; rossmann fold, ATP binding, Mg binding, nucleoside B transferase; HET: MZR ADP; 1.55A {Burkholderia thailandensis} PDB: 3b1o_A 3b1p_A* 3b1q_A* 3b1r_A*
Probab=100.00 E-value=1.3e-45 Score=336.63 Aligned_cols=288 Identities=17% Similarity=0.241 Sum_probs=245.7
Q ss_pred cEEEEcccccceeeec----------CCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecC-ChhhHHHH
Q psy14735 16 DIVVVGSCLVEFITYV----------QTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGN-DKFGKSYL 84 (340)
Q Consensus 16 ~I~viG~~~iD~~~~~----------~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~-D~~g~~i~ 84 (340)
+|+++|++++|+++.+ +++|.++++.........+||++.|+|++|++||.++.++|.+|+ | +|+ ++
T Consensus 2 ~i~v~G~~~iD~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~~D-~g~-i~ 79 (326)
T 3b1n_A 2 ATLICGSIAYDNIMTFEGRFREHILPDQVHLINLSFLVPTMRREFGGCAGNIAYALNLLGGDARMMGTLGAVD-AQP-YL 79 (326)
T ss_dssp CEEEESCCEEEEEEECSSCGGGGCCTTSSSSCEEEEECCSCCCEEECHHHHHHHHHHHTTCCEEEEEEEETTT-CHH-HH
T ss_pred cEEEECcceEEEEEecchhhhhhccccccCCCCcceecccceeccCCHHHHHHHHHHHcCCCeeEEEEECCcC-HHH-HH
Confidence 7999999999999998 788888888877788889999999999999999999999999999 8 888 99
Q ss_pred HHHhhhcCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEEEEeCCCCHHHHHHHH
Q psy14735 85 EELRKYNSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVIMFQGETPWETTLYCL 164 (340)
Q Consensus 85 ~~l~~~~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~ 164 (340)
+.|++ .||+++++.+.++.+|+.+++.++++|++.+...+++...+++++++. .++++++++++.. ++...+++
T Consensus 80 ~~L~~-~gVd~~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~ga~~~~~~~~~~~----~~~~~~v~~~~~~-~~~~~~~~ 153 (326)
T 3b1n_A 80 DRMDA-LGLSREYVRVLPDTYSAQAMITTDLDNNQITAFHPGAMMQSHVNHAGE----AKDIKLAIVGPDG-FQGMVQHT 153 (326)
T ss_dssp HHHHH-HTCEEEEEEEETTCCCEEEEEEECTTCCCEEEEECGGGGGGGGSCGGG----CCSCSEEEECSCC-HHHHHHHH
T ss_pred HHHHH-cCCcccceEEcCCCCceEEEEEECCCCceEEEEecChhhhcChhhccc----ccCCCEEEECCcc-HHHHHHHH
Confidence 99999 999999998777789999999999888888766666655555444432 2789999998765 47788889
Q ss_pred HhchhcccCCceEEEeCCCCC--C--CCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEec
Q psy14735 165 SKLHVSLESRAKIIVNPSPAV--Y--PLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLG 240 (340)
Q Consensus 165 ~~a~~~~~~~~~v~~d~~~~~--~--~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G 240 (340)
+.+ ++.+.++++|+.... | +.+.++++.+|++++|++|++.+++....+ . +.+.+ +++.|+||+|
T Consensus 154 ~~a---~~~g~~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~---~----~~l~~-~~~~vvvT~G 222 (326)
T 3b1n_A 154 EEL---AQAGVPFIFDPGQGLPLFDGATLRRSIELATYIAVNDYEAKLVCDKTGWS---E----DEIAS-RVQALIITRG 222 (326)
T ss_dssp HHH---HHHTCCEEECCGGGGGGCCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCC---H----HHHHT-TSSEEEEECG
T ss_pred HHH---HHCCCEEEEeCchhhhhccHHHHHHHHHhCCEEecCHHHHHHHhCCCCCC---H----HHHHh-cCCEEEEecC
Confidence 998 888999999986432 2 234578899999999999999998753222 1 12344 4899999999
Q ss_pred CCceEEEecCCCceEEEccCCCcC-cccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCcc
Q psy14735 241 GSGVVYATRDNPRLKTITVDHVEY-PIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKE 319 (340)
Q Consensus 241 ~~G~~~~~~~~~~~~~~p~~~~~~-vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~ 319 (340)
++|+++++++ +.+++|+ ++++ ++||+||||+|.|||++++++ |+++++|+++|+++|+.++++.|+....|+++
T Consensus 223 ~~Ga~~~~~~--~~~~~~~-~~v~~vvDttGAGDaF~ag~l~~l~~--g~~~~~a~~~A~~~aa~~v~~~G~~~~~~~~~ 297 (326)
T 3b1n_A 223 EHGATIRHRD--GTEQIPA-VRAERVIDPTGCGDAFRGGLLYGIEH--GFDWATAGRLASLMGALKIAHQGPQTYAPTRA 297 (326)
T ss_dssp GGCEEEEETT--EEEEECC-CCCSCCCCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHTSSSTTCCCCCHH
T ss_pred CCceEEEECC--cEEEeCC-CCCCCCCCCCCchHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 9999999876 6888999 7876 789999999999999999999 99999999999999999999999988889999
Q ss_pred Ccchhhhh
Q psy14735 320 TLPDNLFS 327 (340)
Q Consensus 320 ~v~~~l~~ 327 (340)
++++++.+
T Consensus 298 ev~~~l~~ 305 (326)
T 3b1n_A 298 EIDARFET 305 (326)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998865
No 38
>2abq_A Fructose 1-phosphate kinase; dimer, structural genomics, PSI, protein structure initiative; 2.10A {Bacillus halodurans} SCOP: c.72.1.1
Probab=100.00 E-value=4e-44 Score=324.16 Aligned_cols=288 Identities=17% Similarity=0.189 Sum_probs=249.6
Q ss_pred EEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCCccc
Q psy14735 17 IVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSINTK 96 (340)
Q Consensus 17 I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi~~~ 96 (340)
+.+.|++++|+++.++++ .+|++++.......+||++.|+|++|++||.++.++|.+|+ .+|+.+++.|++ .||+++
T Consensus 3 ~tv~~n~~~D~~~~~~~~-~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~L~~-~gv~~~ 79 (306)
T 2abq_A 3 YTVTLNPSIDYIVQVENF-QQGVVNRSERDRKQPGGKGINVSRVLKRLGHETKALGFLGG-FTGAYVRNALEK-EEIGLS 79 (306)
T ss_dssp EEEESSCEEEEEEECTTC-CSSSEEECSEEEEEEECHHHHHHHHHHHTTCCCEEEEEEEH-HHHHHHHHHHHH-TTCEEC
T ss_pred EEEecCchheEEEEcCCc-ccCCeEEeceeEecCCchHHHHHHHHHHcCCCceEEEEecc-hhHHHHHHHHHH-cCCceE
Confidence 445699999999999996 78999998899999999999999999999999999999998 799999999999 999999
Q ss_pred ceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhh---ccCCcEEEEeCCCC----HHHHHHHHHhchh
Q psy14735 97 YIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNL---LLKAKVIMFQGETP----WETTLYCLSKLHV 169 (340)
Q Consensus 97 ~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~v~i~~~~~----~~~~~~~~~~a~~ 169 (340)
++.... .|+.++++ ++|+++.+...+ ..+++++++...+. +++++++++++..+ .+...++++.+
T Consensus 80 ~v~~~~--~t~~~~~~--~~g~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a-- 151 (306)
T 2abq_A 80 FIEVEG--DTRINVKI--KGKQETELNGTA--PLIKKEHVQALLEQLTELEKGDVLVLAGSVPQAMPQTIYRSMTQIA-- 151 (306)
T ss_dssp CEEESS--CCEEEEEE--ESSSCEEEBCCC--CCCCHHHHHHHHHHHTTCCTTCEEEEESCCCTTSCTTHHHHHHHHH--
T ss_pred EEEcCC--CCceEEEE--eCCceEEEECCC--CCCCHHHHHHHHHHHHhccCCCEEEEecCCCCCCCHHHHHHHHHHH--
Confidence 987653 46777655 478876544333 46888877654332 57899999988764 37788899999
Q ss_pred cccCCceEEEeCCCCCCCCchhhhh-cCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCceEEEe
Q psy14735 170 SLESRAKIIVNPSPAVYPLNPIVMI-LADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSGVVYAT 248 (340)
Q Consensus 170 ~~~~~~~v~~d~~~~~~~~~~~~l~-~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 248 (340)
++++.++++|+.+. .+.++++ ++|++++|++|++.+++....+.+++.++++.|.++|++.++||+|++|+++++
T Consensus 152 -~~~g~~v~~D~~~~---~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 227 (306)
T 2abq_A 152 -KERGAFVAVDTSGE---ALHEVLAAKPSFIKPNHHELSELVSKPIASIEDAIPHVQRLIGEGIESILVSFAGDGALFAS 227 (306)
T ss_dssp -HTTTCEEEEECCHH---HHHHHGGGCCSEECCBHHHHHHHHTSCCCSHHHHHHHHHHHHHTTCCEEEEECGGGCEEEEE
T ss_pred -HhcCCEEEEECChH---HHHHHHhcCCcEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCCceEEEe
Confidence 89999999999753 3457888 999999999999999998766677888899999999999999999999999988
Q ss_pred cCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCcchhhhhc
Q psy14735 249 RDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKETLPDNLFSL 328 (340)
Q Consensus 249 ~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~~~l~~~ 328 (340)
++ +.+++|+ ++++++||+||||+|.|||++++++ |+++++|+++|+++|+.++++. ++|+++++++++.+.
T Consensus 228 ~~--~~~~~~~-~~v~vvdttGAGDaF~a~~~~~l~~--g~~~~~a~~~A~a~aa~~v~~~----~~p~~~ev~~~~~~~ 298 (306)
T 2abq_A 228 AE--GMFHVNV-PSGEVRNSVGAGDSVVAGFLAALQE--GKSLEDAVPFAVAAGSATAFSD----GFCTREEVERLQQQL 298 (306)
T ss_dssp TT--EEEEECC-CCCCCCCCSSHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHHSS----SCCCHHHHHHHHHHH
T ss_pred CC--CEEEEeC-CCccccCCccHHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhcCc----CCCCHHHHHHHHhhE
Confidence 76 6788999 8889999999999999999999999 9999999999999999999998 478999999988764
No 39
>1bx4_A Protein (adenosine kinase); human adenosine kinase, transferase; HET: ADN; 1.50A {Homo sapiens} SCOP: c.72.1.1 PDB: 2i6a_A* 2i6b_A*
Probab=100.00 E-value=9.2e-46 Score=340.44 Aligned_cols=294 Identities=22% Similarity=0.277 Sum_probs=247.1
Q ss_pred CCCcEEEEcccccceeeecCC-C-----CCCCCeee--------------cCceeeecCChHHHHHHHHHhcC----Cce
Q psy14735 13 DEADIVVVGSCLVEFITYVQT-L-----PKPEETVK--------------GYHFEQRFSGKGANQCVAAAKLR----ASV 68 (340)
Q Consensus 13 ~~~~I~viG~~~iD~~~~~~~-~-----~~~~~~~~--------------~~~~~~~~GG~~~n~a~~l~~lG----~~v 68 (340)
+.++|+++|++++|+++.++. + +.+++.+. .......+||++.|+|+++++|| .++
T Consensus 5 ~~~~v~viG~~~~D~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~GG~~~NvA~~la~lgg~~~~~~ 84 (345)
T 1bx4_A 5 RENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSIKVAQWMIQQPHKAA 84 (345)
T ss_dssp CTTCEEEECCCEEEEEEECCHHHHHHTTCCSSEEEECCGGGHHHHHHHHHHSCCEEEEECHHHHHHHHHHHHHCSSTTCE
T ss_pred ccccEEEECCcceeEEEecCHHHHHHcCCCCCcEEEchHHHHHHHHHHhccCCceecCCcHHHHHHHHHHHhcCCCCCcE
Confidence 457899999999999999887 2 35554433 25778899999999999999996 999
Q ss_pred eEEEEecCChhhHHHHHHHhhhcCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHH-HHH--HHHhhccC
Q psy14735 69 ALISKLGNDKFGKSYLEELRKYNSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSAS-DID--AAKNLLLK 145 (340)
Q Consensus 69 ~~~~~vG~D~~g~~i~~~l~~~~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~-~i~--~~~~~~~~ 145 (340)
.|+|.+|+|.+|+.+++.|++ .||+++++. ..+.+|+.+++.++ +|+|+++...+++..++++ +++ ...+.+++
T Consensus 85 ~~ig~vG~D~~G~~i~~~L~~-~gv~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 161 (345)
T 1bx4_A 85 TFFGCIGIDKFGEILKRKAAE-AHVDAHYYE-QNEQPTGTCAACIT-GDNRSLIANLAAANCYKKEKHLDLEKNWMLVEK 161 (345)
T ss_dssp EEEEEEESSHHHHHHHHHHHH-TTCEEEEEE-ESSSCCCEEEEEEE-TTEEEEEEECGGGGGCCGGGTTTSHHHHHHHHH
T ss_pred EEEEEeCCChhHHHHHHHHHH-cCCceeeee-cCCCCCceEEEEEc-CCceEeeeccchHhhcCcccccCcHHHHHHHhh
Confidence 999999999999999999999 999999886 45679999999887 7888877666766667776 554 22344678
Q ss_pred CcEEEEeCC---CCHHHHHHHHHhchhcccCCceEEEeCCCCCC-----CCchhhhhcCcEEEeCHHHHHHhhcCCCCCh
Q psy14735 146 AKVIMFQGE---TPWETTLYCLSKLHVSLESRAKIIVNPSPAVY-----PLNPIVMILADIICINEQEAEIITDMKINNE 217 (340)
Q Consensus 146 ~~~v~i~~~---~~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~-----~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~ 217 (340)
++++++++. .+.+.+.++++.+ ++++.++++|+++..+ +.+.++++++|++++|++|++.|++....+.
T Consensus 162 ~~~v~~~g~~~~~~~~~~~~~~~~a---~~~g~~v~~d~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~ 238 (345)
T 1bx4_A 162 ARVCYIAGFFLTVSPESVLKVAHHA---SENNRIFTLNLSAPFISQFYKESLMKVMPYVDILFGNETEAATFAREQGFET 238 (345)
T ss_dssp CSEEEEEGGGGGTCHHHHHHHHHHH---HHTTCEEEEECCSHHHHHHTHHHHHHHGGGCSEEEEEHHHHHHHHHHTTCCC
T ss_pred CCEEEEEEEeccCCHHHHHHHHHHH---HHcCCEEEEeCCcHHHHHHHHHHHHHHhccCCEEeCCHHHHHHHhcccCCCC
Confidence 999999863 4678889999999 8889999999986432 2345688999999999999999987643344
Q ss_pred hhHHHHHHHHHh------cCCCEEEEEecCCceEEEecCCCceEEEccCCCc---CcccCCCcchHHHHHHHHHHHcCCC
Q psy14735 218 EDLADCMEKLLD------MKCNTVIITLGGSGVVYATRDNPRLKTITVDHVE---YPIESEGVGDCFVGALAYYLCYFPQ 288 (340)
Q Consensus 218 ~~~~~~~~~l~~------~g~~~vvvt~G~~G~~~~~~~~~~~~~~p~~~~~---~vvdttGaGDaF~ag~~~~l~~~~g 288 (340)
+++.++++.|++ +|++.|+||+|++|+++++++ +.+++|+ +++ +++||+||||+|.|||++++++ |
T Consensus 239 ~~~~~~~~~l~~~~~~~~~g~~~vvvt~G~~G~~~~~~~--~~~~~~~-~~v~~~~vvDttGAGDaf~ag~~~~l~~--g 313 (345)
T 1bx4_A 239 KDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATES--EVTAFAV-LDQDQKEIIDTNGAGDAFVGGFLSQLVS--D 313 (345)
T ss_dssp CCHHHHHHHHHTSCCSCTTSCCEEEEEETTEEEEEECSS--CEEEECC-CCCCCTTCCCHHHHHHHHHHHHHHHHTT--T
T ss_pred CCHHHHHHHHHhcccccccCCCEEEEEeCCCCeEEEECC--eEEEEec-cccCcCccccCCCcchHHHHHHHHHHHc--C
Confidence 678888999998 599999999999999998765 6888998 766 8999999999999999999999 9
Q ss_pred CCHHHHHHHHHHHHHHHhcccCCCCCCCCcc
Q psy14735 289 LPLGEIILRSCHVARQSLFNVGLQNSFPDKE 319 (340)
Q Consensus 289 ~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~ 319 (340)
+++++|+++|+++|+.++++.|+. +|++.
T Consensus 314 ~~~~~a~~~A~~~aa~~v~~~G~~--~p~~~ 342 (345)
T 1bx4_A 314 KPLTECIRAGHYAASIIIRRTGCT--FPEKP 342 (345)
T ss_dssp CCHHHHHHHHHHHHHHHTTSSSSC--CCSSC
T ss_pred CCHHHHHHHHHHHHHHHHhccCCC--CCCcc
Confidence 999999999999999999999985 56543
No 40
>2jg5_A Fructose 1-phosphate kinase; 1-phosphofructokinase, transferase; 2.3A {Staphylococcus aureus}
Probab=100.00 E-value=4.5e-44 Score=323.81 Aligned_cols=288 Identities=16% Similarity=0.251 Sum_probs=248.1
Q ss_pred EEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCCccc
Q psy14735 17 IVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSINTK 96 (340)
Q Consensus 17 I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi~~~ 96 (340)
+.+.|++++|+++.+++ +.+|++++.......+||++.|+|++|++||.++.++|.+|+ .+|+.+++.|++ .||+++
T Consensus 3 ~tvt~n~~~D~~~~~~~-~~~g~~~~~~~~~~~~GG~~~N~A~~la~LG~~~~~~~~vG~-~~g~~i~~~l~~-~gv~~~ 79 (306)
T 2jg5_A 3 YTVTFNPSIDYVIFTND-FKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGG-FPGKFIIDTLNN-SAIQSN 79 (306)
T ss_dssp EEEESSCEEEEEEECSS-CCTTSEEECSEEEEEEESHHHHHHHHHHHTTCCCEEEEEECH-HHHHHHHHHHHH-TTCEEC
T ss_pred EEEecCceEEEEEEcCC-cccCceEEeceeEecCCchHHHHHHHHHHcCCCeeEEEEecC-cchHHHHHHHHH-CCCcee
Confidence 45569999999999998 588999999899999999999999999999999999999999 699999999999 999999
Q ss_pred ceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhh---ccCCcEEEEeCCCC----HHHHHHHHHhchh
Q psy14735 97 YIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNL---LLKAKVIMFQGETP----WETTLYCLSKLHV 169 (340)
Q Consensus 97 ~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~v~i~~~~~----~~~~~~~~~~a~~ 169 (340)
++.... .|+.++++ ++|+++.+...+ ..+++++++.+.+. +++++++++++..+ .+...++++.+
T Consensus 80 ~v~~~~--~t~~~~~~--~~g~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a-- 151 (306)
T 2jg5_A 80 FIEVDE--DTRINVKL--KTGQETEINAPG--PHITSTQFEQLLQQIKNTTSEDIVIVAGSVPSSIPSDAYAQIAQIT-- 151 (306)
T ss_dssp CEECSS--CCEEEEEE--ESSSEEEEECCC--CCCCHHHHHHHHHHHTTCCTTCEEEEESCCCTTSCTTHHHHHHHHH--
T ss_pred EEEcCC--CCeEEEEE--cCCCEEEEECCC--CCCCHHHHHHHHHHHHhccCCCEEEEeCCCCCCCChHHHHHHHHHH--
Confidence 987643 46776654 578876654444 35788887654332 57899999987665 37788889999
Q ss_pred cccCCceEEEeCCCCCCCCchhhhh-cCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCceEEEe
Q psy14735 170 SLESRAKIIVNPSPAVYPLNPIVMI-LADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSGVVYAT 248 (340)
Q Consensus 170 ~~~~~~~v~~d~~~~~~~~~~~~l~-~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 248 (340)
++++.++++|+.+. .+.++++ .+|++++|++|++.|++....+.+++.++++.|.++|++.++||+|++|+++++
T Consensus 152 -~~~g~~v~~D~~~~---~~~~~l~~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~ 227 (306)
T 2jg5_A 152 -AQTGAKLVVDAEKE---LAESVLPYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSLGGDGAIYID 227 (306)
T ss_dssp -HHHCCEEEEECCHH---HHHHHGGGCCSEECCBHHHHHHHTTSCCCSHHHHHHHHHHHHHTTCSCEEEECGGGCEEEEC
T ss_pred -HHCCCEEEEECChH---HHHHHHhcCCeEEecCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccCCCceEEEe
Confidence 88899999999753 2345666 699999999999999998766667888889999999999999999999999987
Q ss_pred cCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCcchhhhhc
Q psy14735 249 RDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKETLPDNLFSL 328 (340)
Q Consensus 249 ~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~~~l~~~ 328 (340)
++ +.+++|+ ++++++||+||||+|.|+|++++++ |+++++|+++|+++|+.+|++.| +|+++++++++.+.
T Consensus 228 ~~--~~~~~~~-~~v~vvdttGAGDaf~a~~~~~l~~--g~~~~~a~~~A~a~aa~~v~~~G----~~~~~ev~~~~~~~ 298 (306)
T 2jg5_A 228 KE--ISIKAVN-PQGKVVNTVGSGDSTVAGMVAGIAS--GLSIEKAFQQAVACGTATAFDED----LATRDAIEKIKSQV 298 (306)
T ss_dssp SS--EEEEEEC-CCCCCCCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHTSSS----SCCHHHHHHHHTTC
T ss_pred CC--cEEEEeC-CcccccCCcChHHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHcCCC----CCCHHHHHHHHhce
Confidence 65 6888999 8889999999999999999999999 99999999999999999999999 68999999988653
No 41
>4e69_A 2-dehydro-3-deoxygluconokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Oceanicola granulosus} PDB: 4ebu_A* 4eum_A*
Probab=100.00 E-value=2e-44 Score=329.08 Aligned_cols=275 Identities=17% Similarity=0.237 Sum_probs=236.0
Q ss_pred CCCCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhc--CCceeEEEEecCChhhHHHHHHHhh
Q psy14735 12 KDEADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKL--RASVALISKLGNDKFGKSYLEELRK 89 (340)
Q Consensus 12 ~~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~l--G~~v~~~~~vG~D~~g~~i~~~l~~ 89 (340)
++|++|+++|++++|++.. +++ ......+||++.|+|++|++| |.++.++|.+|+|.+|+.+++.|++
T Consensus 21 ~~m~~i~viG~~~iD~~~~------~~~----~~~~~~~GG~~~NvA~~la~Lg~G~~~~~ig~vG~D~~G~~l~~~L~~ 90 (328)
T 4e69_A 21 QSMMHILSIGECMAELAPA------DLP----GTYRLGFAGDTFNTAWYLARLRPESRISYFSAIGDDALSQQMRAAMSA 90 (328)
T ss_dssp BSSCEEEEESCCEEEEEEC------SST----TEEEEEEECHHHHHHHHHHHHCTTSEEEEECEECSSHHHHHHHHHHHH
T ss_pred ccCCcEEEecCcEEEEecC------CCC----CceEEecCCHHHHHHHHHHhcCCCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 4568999999999999873 222 467788999999999999999 8999999999999999999999999
Q ss_pred hcCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCC---CCCHHHHHHHHhhccCCcEEEEeCC-------CCHHH
Q psy14735 90 YNSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANT---YLSASDIDAAKNLLLKAKVIMFQGE-------TPWET 159 (340)
Q Consensus 90 ~~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~v~i~~~-------~~~~~ 159 (340)
.||+++++.+.++.+|+.+++.++ +|+|++..++++.. .++..++.. +.+++++++++++. .+.+.
T Consensus 91 -~GV~~~~v~~~~~~~T~~~~v~~~-~g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~g~~~~~~~~~~~~~ 166 (328)
T 4e69_A 91 -AGIDGGGLRVIPGRTVGLYLITLE-QGERSFAYWRGQSAARELAGDADALA--AAMARADVVYFSGITLAILDQCGRAT 166 (328)
T ss_dssp -TTEECTTCEECTTCCCEEEEEEEE-TTEEEEEEECTTCGGGGTTSCHHHHH--HHHTTCSEEEEEHHHHHTSCHHHHHH
T ss_pred -cCCccceEEEcCCCCCeEEEEEec-CCceEEEEeCCCCHHHhhcCccccch--HHhcCCCEEEECCchhhccCchHHHH
Confidence 999999998877779999999999 89999887765422 234444332 45889999999863 23456
Q ss_pred HHHHHHhchhcccCCceEEEeCC--CCCC-------CCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhc
Q psy14735 160 TLYCLSKLHVSLESRAKIIVNPS--PAVY-------PLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDM 230 (340)
Q Consensus 160 ~~~~~~~a~~~~~~~~~v~~d~~--~~~~-------~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~ 230 (340)
+.++++.+ ++.+.++++||. +..| +.+.++++.+|++++|++|++.|++. +++.++++.|.++
T Consensus 167 ~~~~~~~a---~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~-----~~~~~~~~~l~~~ 238 (328)
T 4e69_A 167 LLRALAQA---RATGRTIAFDPNLRPRLWAGTGEMTETIMQGAAVSDIALPSFEDEAAWFGD-----AGPDATADRYARA 238 (328)
T ss_dssp HHHHHHHH---HHTTCEEEEECCCCGGGCSCHHHHHHHHHHHHTTCSEECCBHHHHHHHHTC-----SSHHHHHHHHHTT
T ss_pred HHHHHHHH---HhCCCEEEEeCCCChhhcCCHHHHHHHHHHHHHhCCEEeCCHHHHHHHcCC-----CCHHHHHHHHHhc
Confidence 77888888 888999999995 3333 23557889999999999999999997 4778889999999
Q ss_pred CCCEEEEEecCCceEEEecCCCceEEEccCCC-cCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhccc
Q psy14735 231 KCNTVIITLGGSGVVYATRDNPRLKTITVDHV-EYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNV 309 (340)
Q Consensus 231 g~~~vvvt~G~~G~~~~~~~~~~~~~~p~~~~-~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~ 309 (340)
|++.|+||+|++|+++++++ +.+++|+ ++ ++++||+||||+|.|+|++++++ |+++++|+++|+++|+.+|++.
T Consensus 239 g~~~vvvt~G~~G~~~~~~~--~~~~~~~-~~~~~vvdttGAGDaf~a~~~~~l~~--g~~l~~a~~~A~~~aa~~v~~~ 313 (328)
T 4e69_A 239 GVRSVVVKNGPHAVHFLQDG--RRGRVPV-PPVAQVVDTTAAGDSFNAGLLDSVLA--GQPLETAIAAAAALAGQVVQGK 313 (328)
T ss_dssp TCSEEEEBCTTSCEEEEETT--EEEEECC-CCCCSCCCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHTSS
T ss_pred CCCEEEEEeCCCCeEEEeCC--ceEEecC-CCCCCccCCCChhHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHccC
Confidence 99999999999999999876 6889999 75 78999999999999999999999 9999999999999999999999
Q ss_pred CCCC
Q psy14735 310 GLQN 313 (340)
Q Consensus 310 g~~~ 313 (340)
|+.+
T Consensus 314 Ga~~ 317 (328)
T 4e69_A 314 GALV 317 (328)
T ss_dssp SSSC
T ss_pred CCcC
Confidence 9864
No 42
>3ewm_A Uncharacterized sugar kinase PH1459; carbohydrate kinase, PFKB family, PSI-II, NYSGXRC, structural genomics, protein structure initiative; 1.90A {Pyrococcus horikoshii} PDB: 3ih0_A* 3gbu_A*
Probab=100.00 E-value=1.7e-44 Score=327.60 Aligned_cols=287 Identities=23% Similarity=0.272 Sum_probs=243.4
Q ss_pred CCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCC
Q psy14735 14 EADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSI 93 (340)
Q Consensus 14 ~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi 93 (340)
|++|+++|++++|++.. .+++..+.......+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .||
T Consensus 1 M~~v~viG~~~iD~~~~-----~~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~ig~vG~D~~g~~i~~~l~~-~gv 74 (313)
T 3ewm_A 1 MSLIASIGELLIDLISV-----EEGDLKDVRLFEKHPGGAPANVAVGVSRLGVKSSLISKVGNDPFGEYLIEELSK-ENV 74 (313)
T ss_dssp -CEEEEESCCEEEEEES-----SSSCTTTCCEEEEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHH-TTC
T ss_pred CCcEEEECceeeeeecC-----CCCCcccccceeecCCCHHHHHHHHHHHCCCCeEEEEEeCCCHHHHHHHHHHHH-cCC
Confidence 57899999999999863 345666777888999999999999999999999999999999999999999999 999
Q ss_pred cccceEeeCCCCCceEEEEEcCCCCeEEEEeCC-cCCCCCHHHHHHHHhhccCCcEEEEeCCC-----CHHHHHHHHHhc
Q psy14735 94 NTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPG-ANTYLSASDIDAAKNLLLKAKVIMFQGET-----PWETTLYCLSKL 167 (340)
Q Consensus 94 ~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~v~i~~~~-----~~~~~~~~~~~a 167 (340)
+++++.+.++.+|+.+++.+++ |++++..+.+ +...+++++++. +.+++++++++++.. +.+.+.++++.+
T Consensus 75 ~~~~v~~~~~~~T~~~~~~~~~-g~~~~~~~~~~a~~~l~~~~~~~--~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~a 151 (313)
T 3ewm_A 75 DTRGIVKDEKKHTGIVFVQLKG-ASPSFLLYDDVAYFNMTLNDINW--DIVEEAKIVNFGSVILARNPSRETVMKVIKKI 151 (313)
T ss_dssp BCTTEEEESSSCCEEEEEECSS-SSCEEEECCSSGGGCCCGGGCCH--HHHHHCSEEEEESGGGGSTTHHHHHHHHHHHH
T ss_pred CccceeecCCCCceEEEEEecC-CCcceEeeccCHHHhCChhhCCH--HHhCCCCEEEEcCcccCCcchHHHHHHHHHHh
Confidence 9999987778899999888775 9998887765 446788777653 236789999998753 357788889988
Q ss_pred hhcccCCceEEEeCCCC--CCC--------CchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEE
Q psy14735 168 HVSLESRAKIIVNPSPA--VYP--------LNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVII 237 (340)
Q Consensus 168 ~~~~~~~~~v~~d~~~~--~~~--------~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvv 237 (340)
+ .+.++++||... +|. .+.++++.+|++++|++|++.|.+.... ..+.+.++|
T Consensus 152 ---~-~~~~v~~Dp~~~~~~~~~~~~~~~~~~~~~l~~~di~~~N~~E~~~l~~~~~~-------------~~~~~~vvi 214 (313)
T 3ewm_A 152 ---K-GSSLIAFDVNLRLDLWRGQEEEMIKVLEESIKLADIVKASEEEVLYLENQGVE-------------VKGSMLTAI 214 (313)
T ss_dssp ---B-TTBEEEEECCCCGGGGTTCHHHHHHHHHHHHHHCSEEEEEHHHHHHHHTTTCC-------------CCCSSEEEE
T ss_pred ---c-cCCEEEEeCCCChHHcCCCHHHHHHHHHHHHhhCCEEecCHHHHHHHhccCcc-------------ccCceEEEE
Confidence 7 468999999753 222 3456788999999999999999875321 124567999
Q ss_pred EecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHH--cCCCCCHHHHHHHHHHHHHHHhcccCCCCCC
Q psy14735 238 TLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLC--YFPQLPLGEIILRSCHVARQSLFNVGLQNSF 315 (340)
Q Consensus 238 t~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~--~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~ 315 (340)
|+|++|+++++++ +.+++|+ ++++++||+||||+|.|+|+++|+ + |+++++|+++|+++|+++|++.|+.+ +
T Consensus 215 T~G~~G~~~~~~~--~~~~~~~-~~v~vvDttGAGDaf~a~~~~~l~~~~--g~~l~~a~~~A~~~aa~~v~~~G~~~-~ 288 (313)
T 3ewm_A 215 TLGPKGCRLIKNE--TVVDVPS-YNVNPLDTTGAGDAFMAALLVGILKLK--GLDLLKLGKFANLVAALSTQKRGAWS-T 288 (313)
T ss_dssp ECGGGEEEEEETT--EEEEEEC-CCCCCSCCTTHHHHHHHHHHHHHHHSS--SCCHHHHHHHHHHHHHHHTTSCSSCC-C
T ss_pred EECCCCeEEEECC--eeEEcCC-CCcccCCCCCchHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHccCCCCC-C
Confidence 9999999999886 6889999 889999999999999999999999 9 99999999999999999999999975 9
Q ss_pred CCccCcchhhhhccccc
Q psy14735 316 PDKETLPDNLFSLKCEL 332 (340)
Q Consensus 316 ~~~~~v~~~l~~~~~~~ 332 (340)
|+++++++++...+...
T Consensus 289 p~~~ev~~~l~~~~~~~ 305 (313)
T 3ewm_A 289 PRKDELLKYKEAREVLA 305 (313)
T ss_dssp CCHHHHTTSHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999997755443
No 43
>3uq6_A Adenosine kinase, putative; ribokinase, transferase; HET: ADN AMP; 2.30A {Schistosoma mansoni} PDB: 3uq9_A*
Probab=100.00 E-value=9.4e-45 Score=336.74 Aligned_cols=303 Identities=18% Similarity=0.215 Sum_probs=246.9
Q ss_pred CCcEEEEcccccceeeecCC-------CCCCCCe-------------eecCceeeecCChHHHHHHHHHhcCCc---eeE
Q psy14735 14 EADIVVVGSCLVEFITYVQT-------LPKPEET-------------VKGYHFEQRFSGKGANQCVAAAKLRAS---VAL 70 (340)
Q Consensus 14 ~~~I~viG~~~iD~~~~~~~-------~~~~~~~-------------~~~~~~~~~~GG~~~n~a~~l~~lG~~---v~~ 70 (340)
...|++|||+++|++..+++ +++.... ......+..+||++.|+|+++++||.+ +.|
T Consensus 26 ~~~v~giGnalvDi~~~v~d~~l~~~~l~kg~m~l~~~~~~~~~~~~~~~~~~~~~~GGsa~N~a~~la~LG~~~~~~~f 105 (372)
T 3uq6_A 26 EGYVFGMGNPLLDIIVDADDFMYRKYNLKKDNIVLAEEKHMTIYDEIQKKKKLNYIAGGATLNTVKMIQWIIQKPFVCSY 105 (372)
T ss_dssp TTCEEEEECCEEEEEEECCTHHHHHTTCCTTEEEECCGGGTTHHHHHHTSSSCEEEECCHHHHHHHHHHHHHCSTTSEEE
T ss_pred CCeEEEECCceeeEEEEeCHHHHHHcCCCCCceEEcCHHHHHHHHHHhccCCeEEeCCcHHHHHHHHHHHcCCCCCcEEE
Confidence 34599999999999999884 3222111 122345678999999999999999965 899
Q ss_pred EEEecCChhhHHHHHHHhhhcCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHH--HHhhccCCcE
Q psy14735 71 ISKLGNDKFGKSYLEELRKYNSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDA--AKNLLLKAKV 148 (340)
Q Consensus 71 ~~~vG~D~~g~~i~~~l~~~~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~ 148 (340)
+|.||+|.+|+.+.+.|++ .||+++++...++.+|+.|+++++ +|+|++..+.++...+++++++. ..+.++.+++
T Consensus 106 iG~VG~D~~G~~l~~~L~~-~GV~~~~~~~~~~~~T~~~~v~~~-dgert~~~~~ga~~~l~~~~i~~~~~~~~i~~a~~ 183 (372)
T 3uq6_A 106 VGCIGADIQGKYIKNDCSA-LDLVTEFQIAEEPLMTGKVAVLVS-EKLRSMVTYLGAACDLSLAHIEQPHVWSLVEKAQV 183 (372)
T ss_dssp EEEECSSHHHHHHHHHHHH-TTCEECCEECCTTCCEEEEEEEEC-SSCEEEEEEEEGGGGCCHHHHTSHHHHHHHHHCSE
T ss_pred EeeecCCHHHHHHHHHHHH-cCCCceeeeecCCCCceEEEEEcC-CCceEEEEeccchhhcchhhhhhhhHHHHhhcccE
Confidence 9999999999999999999 999999988777788999888776 79999998888888899988753 3356788999
Q ss_pred EEEeCCC---CHHHHHHHHHhchhcccCCceEEEeCCCCC-----CCCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhH
Q psy14735 149 IMFQGET---PWETTLYCLSKLHVSLESRAKIIVNPSPAV-----YPLNPIVMILADIICINEQEAEIITDMKINNEEDL 220 (340)
Q Consensus 149 v~i~~~~---~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~-----~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~ 220 (340)
+++.+.. +.+...++++.+ ++++.++++|++... ++.+.++++++|++++|++|++.|++......++.
T Consensus 184 ~~~~g~~~~~~~~~~~~~~~~a---~~~g~~v~ldls~~~~~~~~~~~l~~ll~~~Dil~~Ne~Ea~~l~~~~~~~~~~~ 260 (372)
T 3uq6_A 184 YYIAGFVINTCYEGMLKIAKHS---LENEKLFCFNLSAPFLSQFNTKEVDEMISYSNIVFGNESEAEAYGEVHGLLEDTV 260 (372)
T ss_dssp EEEEGGGHHHHHHHHHHHHHHH---HHTTCEEEEECCCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHHHTTCCSSHH
T ss_pred EEEecccccccHHHHHHHHHHH---HHcCCeEeeccccchhhhhhHHHHHHHhhcCCcccCCHHHHHHHhCCCCCchhHH
Confidence 9999854 346677888888 999999999997542 23455788999999999999999988655455677
Q ss_pred HHHHHHHHhc-------CCCEEEEEecCCceEEEecCCCceEEEccC--CCcCcccCCCcchHHHHHHHHHHHcCCCCCH
Q psy14735 221 ADCMEKLLDM-------KCNTVIITLGGSGVVYATRDNPRLKTITVD--HVEYPIESEGVGDCFVGALAYYLCYFPQLPL 291 (340)
Q Consensus 221 ~~~~~~l~~~-------g~~~vvvt~G~~G~~~~~~~~~~~~~~p~~--~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~ 291 (340)
.+.++.+.+. +.+.+|||+|++|+++++.++.+...+|.+ ++.++||||||||+|+|||+++|++ |+++
T Consensus 261 ~~~a~~l~~~~~~~~~~~~~~vvvT~G~~G~~~~~~~~~~~~~~~v~~~~~~~vVDTtGAGDaF~agfl~~l~~--g~~l 338 (372)
T 3uq6_A 261 HATARYIADLPFADGKKRKRLVIITRGKNPLLYTDSSDSEIHQFMVEQFKDDQIIDTNGAGDAFAAGFIADYIR--GKPM 338 (372)
T ss_dssp HHHHHHHHHSCCTTCCCCCCEEEEEETTEEEEEEESSCSSCEEECCCCCCGGGCCCCTTHHHHHHHHHHHHHTT--TCCH
T ss_pred HHHHHHHhhhhhhhhcCCceEEEEcCCCCceEEecCCCceeeeeeccCCCCCceeCCCchHHHHHHHHHHHHHc--CCCH
Confidence 7888887753 567899999999999998764344455441 2347899999999999999999999 9999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCCCCccCcchhh
Q psy14735 292 GEIILRSCHVARQSLFNVGLQNSFPDKETLPDNL 325 (340)
Q Consensus 292 ~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~~~l 325 (340)
++|+++|+++|+.+|++.|+. +|++++++-.|
T Consensus 339 ~~a~~~a~~aAa~vv~~~Ga~--lp~r~~~~lkl 370 (372)
T 3uq6_A 339 ITSLHAAVKAAAYIICRSGFS--LGSRDSYSLKI 370 (372)
T ss_dssp HHHHHHHHHHHHHHHTSSSSC--CCCGGGCC---
T ss_pred HHHHHHHHHHHHHHHcCCCCC--CCChhHHHHHh
Confidence 999999999999999999984 79998887554
No 44
>3bf5_A Ribokinase related protein; 10640157, putative ribokinase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.91A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=8e-45 Score=328.50 Aligned_cols=278 Identities=18% Similarity=0.231 Sum_probs=236.8
Q ss_pred CCCCCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhh
Q psy14735 11 LKDEADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKY 90 (340)
Q Consensus 11 ~~~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~ 90 (340)
.+++++|+++|++++|++..++++| +++..+.......+||++.|+|++|++||.++.++|.+|+| +|+.+++.|++
T Consensus 17 ~~~~~~v~viG~~~iD~~~~~~~~p-~g~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D-~G~~i~~~L~~- 93 (306)
T 3bf5_A 17 FQGMRFLAYFGHLNIDVLISVDSIP-REGSVNVKDLRPRFGGTAGNFAIVAQKFRIPFDLYSAVGMK-THREYLAMIES- 93 (306)
T ss_dssp --CCEEEEEECCCEEEEEEECSCCC-SSEEEECSEEEEEEEHHHHHHHHHHHHTTCCCEEEEEEETT-TCHHHHHHHHH-
T ss_pred ccCCCcEEEECCceEEEEEecCCCC-CCceEECcceEecCCChHHHHHHHHHHcCCCeEEEEEEeCC-hHHHHHHHHHH-
Confidence 3556799999999999999999999 88888888888999999999999999999999999999999 99999999999
Q ss_pred cCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEEEEeCCCCHHHHHHHHHhchhc
Q psy14735 91 NSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVIMFQGETPWETTLYCLSKLHVS 170 (340)
Q Consensus 91 ~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~a~~~ 170 (340)
.||+++++...++.+|+.+++.+++ |+|+++.+.+++..++ ++++ ++++++++++.. ...++++.+
T Consensus 94 ~gV~~~~v~~~~~~~T~~~~~~~~~-g~r~~~~~~ga~~~~~-~~l~------~~~~~v~~~~~~---~~~~~~~~a--- 159 (306)
T 3bf5_A 94 MGINTGHVEKFEDESGPICYIATDG-KKQVSFMHQGAMAAWA-PQLA------DEYEYVHFSTGP---NYLDMAKSI--- 159 (306)
T ss_dssp TTCCCTTEEEETTCCCSEEEEEECS-SCEEEEEECTHHHHCC-CCCC------SCEEEEEECSSS---SHHHHHHHC---
T ss_pred cCCCchheEecCCCCCceEEEEEcC-CeeEEEEeCChhhhhh-Hhhc------CCCCEEEECChH---HHHHHHHHh---
Confidence 9999999876667789999999988 9998877776554444 2221 678999998766 577788888
Q ss_pred ccCCceEEEeCCCCCC----CCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCceEE
Q psy14735 171 LESRAKIIVNPSPAVY----PLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSGVVY 246 (340)
Q Consensus 171 ~~~~~~v~~d~~~~~~----~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~ 246 (340)
++ ++++|+.+..| +.+..+++.+|++++|++|++.+++....+.. .+ .++||+|++|+++
T Consensus 160 ~~---~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~-------~l------~vvvT~G~~Ga~~ 223 (306)
T 3bf5_A 160 RS---KIIFDPSQEIHKYSKDELKKFHEISYMSIFNDHEYRVFREMTGLSSP-------KV------TTIVTNGERGSSL 223 (306)
T ss_dssp CS---EEEECCGGGGGGSCHHHHHHHHHHCSEEEEEHHHHHHHHHHHCCSSC-------SS------CEEEEEGGGEEEE
T ss_pred CC---cEEEcCchhhhhccHHHHHHHHhcCCEEEcCHHHHHHHhCCCCcCcc-------cE------EEEEeecccCeEE
Confidence 65 89999986432 23457889999999999999999875321111 11 1999999999999
Q ss_pred EecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcc--cCCCCCCCCccCcchh
Q psy14735 247 ATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFN--VGLQNSFPDKETLPDN 324 (340)
Q Consensus 247 ~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~--~g~~~~~~~~~~v~~~ 324 (340)
++++ +.+++|+ ++++ +||+||||+|.|||++++++ |+++++|+++|+++|+.++++ .|+.+.+|++++++++
T Consensus 224 ~~~~--~~~~~~~-~~v~-vDttGAGDaF~ag~~~~l~~--g~~~~~a~~~A~~~aa~~v~~~~~G~~~~~p~~~ev~~~ 297 (306)
T 3bf5_A 224 FMDG--KKYDFPA-IPSS-GDTVGAGDSFRAGLYLALYN--RRSIEKGMIYGTIIAHHVIDDGIENFSLNMEDLERETEN 297 (306)
T ss_dssp EETT--EEEEEEC-CCCC-SCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHHHCSTTCCCCHHHHHHHHHH
T ss_pred EeCC--cEEEecC-CcCC-CCCCCccHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHhccCCccccccCCCHHHHHHH
Confidence 9876 6888999 8889 99999999999999999999 999999999999999999999 9998778999999988
Q ss_pred hhh
Q psy14735 325 LFS 327 (340)
Q Consensus 325 l~~ 327 (340)
+.+
T Consensus 298 ~~~ 300 (306)
T 3bf5_A 298 YRR 300 (306)
T ss_dssp HHH
T ss_pred HHh
Confidence 864
No 45
>2abs_A Adenosine kinase, AK; ribokinase fold, alpha/beta, intermediate conformation, signaling protein,transferase; HET: ACP; 1.10A {Toxoplasma gondii} SCOP: c.72.1.1 PDB: 2a9z_A* 2aa0_A* 2ab8_A* 2a9y_A* 1dgm_A* 1lio_A 1lii_A* 1lij_A* 1lik_A*
Probab=100.00 E-value=2.7e-43 Score=328.37 Aligned_cols=289 Identities=18% Similarity=0.246 Sum_probs=240.1
Q ss_pred CCCCcEEEEcccccceeeecCC-C-----CCCCCeee-------------cCceeeecCChHHHHHHHHHhc---CCcee
Q psy14735 12 KDEADIVVVGSCLVEFITYVQT-L-----PKPEETVK-------------GYHFEQRFSGKGANQCVAAAKL---RASVA 69 (340)
Q Consensus 12 ~~~~~I~viG~~~iD~~~~~~~-~-----~~~~~~~~-------------~~~~~~~~GG~~~n~a~~l~~l---G~~v~ 69 (340)
.++++|+++|++++|+++.+++ + |.+|+.+. .......+||++.|+|++|++| |.++.
T Consensus 30 ~~~~~vlviG~~~lD~~~~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~GG~~~NvA~~la~Lg~~g~~v~ 109 (383)
T 2abs_A 30 TGPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTLDQFNPTSLPGGSALNSVRVVQKLLRKPGSAG 109 (383)
T ss_dssp CCCCCEEEECCCEEEEEEECCHHHHHHTTCCTTCEEECCGGGGGGGGTGGGGCCEEEEESHHHHHHHHHHHHHCSTTSEE
T ss_pred CCCceEEEECcchheeEeccCHHHHHhcCCCCCceeechhhHHHHHHhhccccceeeCCChHHHHHHHHHHhccCCCcEE
Confidence 3356999999999999999886 3 56676652 3467788999999999999999 89999
Q ss_pred EEEEecCChhhHHHHHHHhhhcCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEE
Q psy14735 70 LISKLGNDKFGKSYLEELRKYNSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVI 149 (340)
Q Consensus 70 ~~~~vG~D~~g~~i~~~l~~~~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v 149 (340)
|+|.+|+|.+|+.+++.|++ .||+++++. ..+.+|+.+++.++ +|+|+++...++...+++++. ..+.+++++++
T Consensus 110 ~ig~vG~D~~G~~i~~~L~~-~GV~~~~v~-~~~~~T~~~~~~~~-~g~r~~~~~~~a~~~l~~~~~--~~~~l~~~~~v 184 (383)
T 2abs_A 110 YMGAIGDDPRGQVLKELCDK-EGLATRFMV-APGQSTGVCAVLIN-EKERTLCTHLGACGSFRLPED--WTTFASGALIF 184 (383)
T ss_dssp EEEEECSSHHHHHHHHHHHH-HTCEEEEEE-CTTCCCEEEEEEEE-TTEEEEEEECGGGGGCCCCTT--HHHHTTTCCEE
T ss_pred EEEEecCChhHHHHHHHHHH-cCCceeeee-cCCCCCeEEEEEEc-CCceeEeeccChhhhCChhhh--hHHHhhcCCEE
Confidence 99999999999999999999 999999886 44679999999887 788887766666655655421 12347899999
Q ss_pred EEeCC---CCHHHHHHHHHhchhccc-CCceEEEeCCCCCC-----CCchhhhhcCcEEEeCHHHHHHhhcCC-CCC---
Q psy14735 150 MFQGE---TPWETTLYCLSKLHVSLE-SRAKIIVNPSPAVY-----PLNPIVMILADIICINEQEAEIITDMK-INN--- 216 (340)
Q Consensus 150 ~i~~~---~~~~~~~~~~~~a~~~~~-~~~~v~~d~~~~~~-----~~~~~~l~~~dil~~n~~E~~~l~~~~-~~~--- 216 (340)
++++. .+.+.+.++++.+ ++ .++++++|+++..+ +.+.++++.+|++++|++|++.|++.. ..+
T Consensus 185 ~~~g~~~~~~~~~~~~~~~~a---~~~~g~~v~~d~~~~~~~~~~~~~l~~ll~~~dil~pN~~Ea~~L~g~~~~~~~~~ 261 (383)
T 2abs_A 185 YATAYTLTATPKNALEVAGYA---HGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEK 261 (383)
T ss_dssp EEEGGGGTTCHHHHHHHHHHH---HTSTTCEEEEECCCHHHHHHCHHHHHHHHHTCSEEEEEHHHHHHHHHHHTCC----
T ss_pred EEeeecccCCHHHHHHHHHHH---HHhcCCEEEEeCCcHHHHHHHHHHHHHHHhhCCEEeCCHHHHHHHhcccCcccccc
Confidence 99863 4678889999999 88 89999999986532 234568899999999999999998753 221
Q ss_pred --------hhhHHHHHHHHHh------c-CCCEEEEEecCCceEEEe----cCCCceEEEccCCCc---CcccCCCcchH
Q psy14735 217 --------EEDLADCMEKLLD------M-KCNTVIITLGGSGVVYAT----RDNPRLKTITVDHVE---YPIESEGVGDC 274 (340)
Q Consensus 217 --------~~~~~~~~~~l~~------~-g~~~vvvt~G~~G~~~~~----~~~~~~~~~p~~~~~---~vvdttGaGDa 274 (340)
.+++.++++.|.+ + |++.||||+|++|++++. .++ +.+++|+ +++ +++||+||||+
T Consensus 262 ~~~s~~~~~~~~~~~a~~l~~~~~~~~~~g~~~VvvT~G~~Ga~~~~~~~~~~~-~~~~~~~-~~v~~~~vvDttGAGDa 339 (383)
T 2abs_A 262 TALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTV-VVHEVGV-PVVAAEKIVDTNGAGDA 339 (383)
T ss_dssp ------CHHHHHHHHHHHHHHHHTTCCCSSCCEEEEECTTSCEEEEEECTTSCE-EEEEECC-CCCCGGGCCCCTTHHHH
T ss_pred cccccccccccHHHHHHHHHhccccccccCCCEEEEEcCCCCeEEEEeecCCCC-eEEEecC-ccCCcCCcCcCCChHHH
Confidence 4567788888887 3 899999999999999984 222 6778888 766 89999999999
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCC
Q psy14735 275 FVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQ 312 (340)
Q Consensus 275 F~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~ 312 (340)
|.|||+++|++ |+++++|+++|+++|+.+|++.|+.
T Consensus 340 F~ag~~~~l~~--g~~l~~al~~A~a~aa~~v~~~Ga~ 375 (383)
T 2abs_A 340 FVGGFLYALSQ--GKTVKQCIMCGNACAQDVIQHVGFS 375 (383)
T ss_dssp HHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHTSSSCC
T ss_pred HHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHhcCCcc
Confidence 99999999999 9999999999999999999999985
No 46
>2afb_A 2-keto-3-deoxygluconate kinase; TM0067, 2-dehydro-3- deoxygluconokinase, PFKB family carbohy kinase, structural genomics; 2.05A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.5e-42 Score=319.80 Aligned_cols=297 Identities=19% Similarity=0.177 Sum_probs=243.8
Q ss_pred CCCCcEEEEcccccceeeecCCCCCCCC--eeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhh
Q psy14735 12 KDEADIVVVGSCLVEFITYVQTLPKPEE--TVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRK 89 (340)
Q Consensus 12 ~~~~~I~viG~~~iD~~~~~~~~~~~~~--~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~ 89 (340)
...++|+++|+.+.++. .+++ ..+.......+||+++|+|++|++||.++.++|.+|+|.+|+.+++.|++
T Consensus 10 ~~~~~~~~~ge~l~~~~-------~~~~~~~~~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~~G~~i~~~L~~ 82 (351)
T 2afb_A 10 HHHMKVVTFGEIMLRLS-------PPDHKRIFQTDSFDVTYGGAEANVAAFLAQMGLDAYFVTKLPNNPLGDAAAGHLRK 82 (351)
T ss_dssp CCCCEEEEESCCEEEEE-------CSTTCCGGGCSEEEEEEECHHHHHHHHHHHTTSEEEEEEEECSSHHHHHHHHHHHH
T ss_pred cccceEEEechhhheec-------CCCCccccccceeeEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHH
Confidence 44689999999998864 3343 44567888999999999999999999999999999999999999999999
Q ss_pred hcCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCC---cCCCCCHHHHHHHHhhccCCcEEEEeCCCC------HHHH
Q psy14735 90 YNSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPG---ANTYLSASDIDAAKNLLLKAKVIMFQGETP------WETT 160 (340)
Q Consensus 90 ~~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~------~~~~ 160 (340)
.||+++++.. .+.+|+.+++..++.++++++.+.. +...+++++++. ...+++++++++++..+ .+.+
T Consensus 83 -~gv~~~~v~~-~~~~t~~~~v~~~~~~r~~~v~~~~~~~a~~~~~~~~~~~-~~~~~~~~~v~~~g~~~~~~~~~~~~~ 159 (351)
T 2afb_A 83 -FGVKTDYIAR-GGNRIGIYFLEIGASQRPSKVVYDRAHSAISEAKREDFDW-EKILDGARWFHFSGITPPLGKELPLIL 159 (351)
T ss_dssp -TTCBCTTEEE-CSSCCCEEEEECCBTTBCCEEEEECTTCTTTTCCGGGCCH-HHHTTTEEEEEEETTSGGGSTTHHHHH
T ss_pred -cCCcceeEEE-CCCcceEEEEEecCCCCcceEEEeCCCChhhhCChhhCCH-HHhhcCCCEEEEeCcccccChhHHHHH
Confidence 9999999876 4678998887766534444444332 334566665542 13468999999997653 3778
Q ss_pred HHHHHhchhcccCCceEEEeCCC--CCC------CCchhhhhcCcEEEeCHHHHHHhhcCCCC---------ChhhHHHH
Q psy14735 161 LYCLSKLHVSLESRAKIIVNPSP--AVY------PLNPIVMILADIICINEQEAEIITDMKIN---------NEEDLADC 223 (340)
Q Consensus 161 ~~~~~~a~~~~~~~~~v~~d~~~--~~~------~~~~~~l~~~dil~~n~~E~~~l~~~~~~---------~~~~~~~~ 223 (340)
.++++.+ ++.+.++++||.. .+| +.+..+++.+|++++|++|++.|++.... +.+++.++
T Consensus 160 ~~~~~~a---~~~g~~v~~Dp~~~~~~~~~~~~~~~~~~ll~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~~~~~~~ 236 (351)
T 2afb_A 160 EDALKVA---NEKGVTVSCDLNYRARLWTKEEAQKVMIPFMEYVDVLIANEEDIEKVLGISVEGLDLKTGKLNREAYAKI 236 (351)
T ss_dssp HHHHHHH---HHHTCEEEEECCCCTTTCCHHHHHHHHHHHGGGCSEEEECHHHHHHHHCCCCSCC-------CHHHHHHH
T ss_pred HHHHHHH---HHcCCEEEEeCCCchhcCChHHHHHHHHHHHhhCCEEEecHHHHHHHhCCCcccccccccccchhhHHHH
Confidence 8889998 8889999999974 233 22456789999999999999999997653 45667888
Q ss_pred HHHHHhc-CCCEEEEEecCCce--------EEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHH
Q psy14735 224 MEKLLDM-KCNTVIITLGGSGV--------VYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEI 294 (340)
Q Consensus 224 ~~~l~~~-g~~~vvvt~G~~G~--------~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a 294 (340)
++.|.+. |++.|+||+|++|+ ++++++ +.+++|+ ++++++||+||||+|.|+|++++++ |+++++|
T Consensus 237 ~~~l~~~~g~~~vvvT~G~~G~~~~~~~g~~~~~~~--~~~~~~~-~~v~vvdttGAGDaF~ag~~~~l~~--g~~l~~a 311 (351)
T 2afb_A 237 AEEVTRKYNFKTVGITLRESISATVNYWSVMVFENG--QPHFSNR-YEIHIVDRVGAGDSFAGALIYGSLM--GFDSQKK 311 (351)
T ss_dssp HHHHHHHHCCSEEEEEEEECSCSSEEEEEEEEEETT--EEEECCC-EEEECSCCTTHHHHHHHHHHHHHHH--TCCHHHH
T ss_pred HHHHHHHcCCCEEEEEeCCcCccccccceeEEEeCC--cEEEcCC-CCCccCCCCCchHHHHHHHHHHHHc--CCCHHHH
Confidence 8888875 99999999999975 667654 6788898 8888999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCccCcchhhhh
Q psy14735 295 ILRSCHVARQSLFNVGLQNSFPDKETLPDNLFS 327 (340)
Q Consensus 295 ~~~a~~~Aa~~~~~~g~~~~~~~~~~v~~~l~~ 327 (340)
+++|+++|+.++++.|+.. .|+++++++++..
T Consensus 312 ~~~A~~~aa~~v~~~G~~~-~~~~~ev~~~l~~ 343 (351)
T 2afb_A 312 AEFAAAASCLKHTIPGDFV-VLSIEEIEKLASG 343 (351)
T ss_dssp HHHHHHHHHHHTTSSSSSC-CCCHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHhc
Confidence 9999999999999999875 8999999988864
No 47
>2qhp_A Fructokinase; NP_810670.1, PFKB family carbohydrate kinase, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=2.2e-42 Score=311.33 Aligned_cols=273 Identities=20% Similarity=0.211 Sum_probs=221.3
Q ss_pred CCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCC
Q psy14735 14 EADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSI 93 (340)
Q Consensus 14 ~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi 93 (340)
+++|+++|+.++|++ |. ...+||++.|+|++|++||.++.++|.+|+|.+|+.+++.|++ .||
T Consensus 3 ~~~v~viG~~~~D~~------p~----------~~~~GG~~~N~A~~la~LG~~~~~~~~vG~D~~g~~~~~~l~~-~gv 65 (296)
T 2qhp_A 3 NNIIVGMGEALWDVL------PE----------GKKIGGAPANFAYHVSQFGFDSRVVSAVGNDELGDEIMEVFKE-KQL 65 (296)
T ss_dssp CCEEEEESCCEEEEE------TT----------EEEEECHHHHHHHHHHHTTCEEEEEEEEESSHHHHHHHHHHHH-TTC
T ss_pred cceEEEEchhheEec------CC----------CCCCCCHHHHHHHHHHHcCCCeeEEEEeCCChHHHHHHHHHHH-cCC
Confidence 358999999999997 22 2679999999999999999999999999999999999999999 999
Q ss_pred cccceEeeCCCCCceEEEEEcCCCCeEEEEeCCc-CCCCCHHHHHHHHhhccCCcEEEEeCCC-----CHHHHHHHHHhc
Q psy14735 94 NTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGA-NTYLSASDIDAAKNLLLKAKVIMFQGET-----PWETTLYCLSKL 167 (340)
Q Consensus 94 ~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~v~i~~~~-----~~~~~~~~~~~a 167 (340)
+++.+.++.+|+.+++.++++|+|++.+..+. ...+++.+.. .+.+++++++++++.. +.+.+.++++.+
T Consensus 66 --~~v~~~~~~~T~~~~v~~~~~g~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~v~~g~~~~~~~~~~~~~~~~~~~a 141 (296)
T 2qhp_A 66 --KNQIERVDYPTGTVQVTLDDEGVPCYEIKEGVAWDNIPFTDEL--KRLALNTRAVCFGSLAQRNEVSRATINRFLDTM 141 (296)
T ss_dssp --CEEEEEESSCCEEEEEC------CCEEECSSCGGGCCCCCHHH--HHHHHTEEEEEECSGGGSSHHHHHHHHHHHHHS
T ss_pred --CEEeecCCCCceEEEEEECCCCCEEEEEecCChhhhCCcchhh--HhhhcCCCEEEECChHhcChHHHHHHHHHHHHH
Confidence 77776667899999988888898877766543 3345322211 1346789999986532 346677888888
Q ss_pred hhccc-CCceEEEeCCCC--CC--CCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhc-CCCEEEEEecC
Q psy14735 168 HVSLE-SRAKIIVNPSPA--VY--PLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDM-KCNTVIITLGG 241 (340)
Q Consensus 168 ~~~~~-~~~~v~~d~~~~--~~--~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~-g~~~vvvt~G~ 241 (340)
++ ++.++++|+... .| +.+.++++++|++++|++|++.|++....+.+++.++++.|.++ |++.++||+|+
T Consensus 142 ---~~~~~~~v~~D~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~~~~~~~~~~~~~~~l~~~~g~~~vvvt~G~ 218 (296)
T 2qhp_A 142 ---PDIDGQLKIFDINLRQDFYTKEVLRESFKRCNILKINDEELVTISRMFGYPGIDLQDKCWILLAKYNLKMLILTCGI 218 (296)
T ss_dssp ---CCTTSCEEEEECCCCTTCCCHHHHHHHHHHCSEEEEEHHHHHHHHHHTTCTTSCHHHHHHHHHHHTTCSEEEEECGG
T ss_pred ---HhcCCCEEEEECcCCccccCHHHHHHHHHHCCEEECCHHHHHHHhcccCCCCCCHHHHHHHHHHhcCCCEEEEeecC
Confidence 77 689999998642 22 23456789999999999999999986544446777888888885 99999999999
Q ss_pred CceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCC
Q psy14735 242 SGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSF 315 (340)
Q Consensus 242 ~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~ 315 (340)
+|+++++++ +.+++|+ ++++++||+||||+|.|+|++++++ |+++++|+++|+++|+.++++.|+.+..
T Consensus 219 ~G~~~~~~~--~~~~~~~-~~v~~vdttGAGD~f~a~~~~~l~~--g~~~~~a~~~a~~~aa~~v~~~G~~~~~ 287 (296)
T 2qhp_A 219 NGSYVFTPG--VVSFQET-PKVPVADTVGAGDSFTAAFCASILN--GKSVPEAHKLAVEVSAYVCTQSGAMPEL 287 (296)
T ss_dssp GCEEEEETT--EEEEECC-CCCCCSCCTTHHHHHHHHHHHHHHH--TCCHHHHHHHHHHHHHHHHTSSSSSCCC
T ss_pred CCeEEEECC--eEEEeCC-CCCccccCCCchHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 999999876 6889999 8889999999999999999999999 9999999999999999999999987643
No 48
>4gm6_A PFKB family carbohydrate kinase; enzyme function initiative, transferase; 2.00A {Listeria grayi dsm 20601}
Probab=100.00 E-value=2.8e-43 Score=324.62 Aligned_cols=304 Identities=14% Similarity=0.101 Sum_probs=221.8
Q ss_pred CCCCcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhc
Q psy14735 12 KDEADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYN 91 (340)
Q Consensus 12 ~~~~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~ 91 (340)
++|+||+++|++++|+.. +.+...........++||+++|+|.+|++||.++.++|.+|+|.+|+.+++.|++ .
T Consensus 22 ~mm~kv~~~GE~m~~l~p-----~~~~~~~~~~~~~~~~GG~~aNvA~~larLG~~~~~ig~vG~D~~G~~l~~~L~~-~ 95 (351)
T 4gm6_A 22 SMMKQVVTIGELLMRLST-----QQGIPFSQTTALDIHIGGAEANVAVNLSKLGHPTRIATVVPANPIGKMAVEHLWR-H 95 (351)
T ss_dssp ---CEEEEECCCEEEEEC-----CTTCCGGGCSEEEEEEECHHHHHHHHHHHTTCCEEEEEEECSSHHHHHHHHHHHH-T
T ss_pred hccCCEEEEcceeEEecC-----CCCCCccccCeEEEecCChHHHHHHHHHHcCCCeEEEEEeCCCHHHHHHHHHHHH-c
Confidence 456899999999999863 1223334456788899999999999999999999999999999999999999999 9
Q ss_pred CCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCc--CCCCCHHHHHHHHhhccCCcEEEEeCCC------CHHHHHHH
Q psy14735 92 SINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGA--NTYLSASDIDAAKNLLLKAKVIMFQGET------PWETTLYC 163 (340)
Q Consensus 92 gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~v~i~~~~------~~~~~~~~ 163 (340)
||+++++...++.+|+.+++..+..+++.+...... ...+.+.++. ..+.+++++++|+++.. +.+.+.++
T Consensus 96 GVdt~~v~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~d~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 174 (351)
T 4gm6_A 96 QVDTAFVVEAGDRLGTYYLESGTALKAPSVVYDRQHSSFARHKSMDWD-LSELLKGIRVLHVSGITIALSTFWLEMVVKI 174 (351)
T ss_dssp TEECTTEEECSSCCCEEEEECCBTTBCCEEEEECTTCHHHHCCCCCCC-HHHHHTTEEEEEEEHHHHHHCHHHHHHHHHH
T ss_pred CCCcccccccCCccceeEEEEccCCcceEEEEccccchhhhCCccccC-HHHHHhhcccceecccchhhchhHHHHHHHH
Confidence 999999987766555544443445555555544321 1112222211 11347889999998632 24677889
Q ss_pred HHhchhcccCCceEEEeCC--CCCCC------CchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHh----cC
Q psy14735 164 LSKLHVSLESRAKIIVNPS--PAVYP------LNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLD----MK 231 (340)
Q Consensus 164 ~~~a~~~~~~~~~v~~d~~--~~~~~------~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~----~g 231 (340)
++.+ +++|++|+||+. +.+|. .+.++++++|++++|++|++.+++...+..+......+.... .+
T Consensus 175 ~~~a---k~~g~~v~~D~n~r~~lw~~~~~~~~~~~~l~~~dil~~N~~Ea~~l~g~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
T 4gm6_A 175 IREA---KRNGIKISFDMNYRAKLWELEAAKRAYQQLLPLVDYCSAGQMDAVAFFEISSETTDYYQAMHDKYPNIELFYA 251 (351)
T ss_dssp HHHH---HHTTCEEEEECCCCTTTSCHHHHHHHHHHHGGGCSEEECCHHHHHHTSCCCTTCSCHHHHHHHHCTTCCEEEE
T ss_pred HHHH---HHcCCCcccCCCcCchhhhhhhHHHHHHHHHHhCCccccCHHHHHHHhCCCCchhHHHHHHHhhhhhhhhhhc
Confidence 9999 999999999984 45552 345678999999999999999998754333222222222111 12
Q ss_pred CCEEEEEecC--CceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhccc
Q psy14735 232 CNTVIITLGG--SGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNV 309 (340)
Q Consensus 232 ~~~vvvt~G~--~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~ 309 (340)
.+..+++.+. .+..++..+ +.++.|+++..+++|||||||+|.|||++++++ |+++++|+++|+++|+++|++.
T Consensus 252 ~~~~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~VvDttGAGDaF~ag~l~~l~~--g~~~~~al~~A~aaaal~v~~~ 327 (351)
T 4gm6_A 252 TKRTVISASHHLLQGHLWTQG--ECWESEEYAIYPIVDRVGGGDAYTAAVLHGILS--EWRPDETVKFATAAAGLKHSIH 327 (351)
T ss_dssp EEEEEEETTEEEEEEEEEETT--EEEEEEEEEECSCSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHTTSS
T ss_pred cccceeeeccCCceEEEEeCC--ceEEeCCCCCCCcCCCCChhHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHhCCC
Confidence 3345555544 356667666 577777623348999999999999999999999 9999999999999999999999
Q ss_pred CCCCCCCCccCcchhhhhccc
Q psy14735 310 GLQNSFPDKETLPDNLFSLKC 330 (340)
Q Consensus 310 g~~~~~~~~~~v~~~l~~~~~ 330 (340)
|+.+.+|. +++++++...+.
T Consensus 328 Ga~~~~~~-~ev~~~l~~~~~ 347 (351)
T 4gm6_A 328 GDINPFDE-KTIADFAADKSR 347 (351)
T ss_dssp SSSCCCCH-HHHHHHHHC---
T ss_pred CCCCCCCH-HHHHHHHhCCCC
Confidence 99987774 789999987544
No 49
>3kd6_A Carbohydrate kinase, PFKB family; nucleoside kinase, AMP, PSI-II, NYSGXRC, struc genomics, protein structure initiative; HET: AMP; 1.88A {Chlorobaculum tepidum}
Probab=100.00 E-value=4e-42 Score=311.95 Aligned_cols=286 Identities=16% Similarity=0.173 Sum_probs=231.8
Q ss_pred CcEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCC-ceeEEEEecCChhhHHHHHHHhhhcCC
Q psy14735 15 ADIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRA-SVALISKLGNDKFGKSYLEELRKYNSI 93 (340)
Q Consensus 15 ~~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~-~v~~~~~vG~D~~g~~i~~~l~~~~gi 93 (340)
++|+++|+.++|++.. +. ......+||++.|+|++|++||. ++.++|.+|+| +|+.+++.|++ .||
T Consensus 3 ~~ilviG~~~iD~~~~------~~-----~~~~~~~GG~~~NvA~~la~LG~~~~~~ig~vG~D-~g~~~~~~L~~-~gV 69 (313)
T 3kd6_A 3 LSLLVIGSLAFDDIET------PF-----GRSDNTLGGSSTYIALSASYFTDEPIRMVGVVGSD-FGKEHFDLLHA-KNI 69 (313)
T ss_dssp CCEEEESCCEEEEEEC------SS-----CEEEEEEECHHHHHHHHHTTTCSSCEEEEEEEETT-SCHHHHHHHHH-TTE
T ss_pred ccEEEEeEEEEeeecC------CC-----CcccccCCCHHHHHHHHHHHhCCCceEEEEecCCC-cHHHHHHHHHH-cCC
Confidence 5899999999999852 11 14567899999999999999999 99999999999 99999999999 999
Q ss_pred cccceEeeCCCCCceEEE--EEcCCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEEEEeCCCCHHHHHHHHHhchhcc
Q psy14735 94 NTKYIWLLQDVTTGVCSK--VISNKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVIMFQGETPWETTLYCLSKLHVSL 171 (340)
Q Consensus 94 ~~~~v~~~~~~~t~~~~i--~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~a~~~~ 171 (340)
+++++.+.++.+|....- ..+.++++++....+....+.+.. .+.+++++++++++ .+++...++++.+ +
T Consensus 70 d~~~v~~~~~~~T~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~-~~~~~~~~~~~~~---~ 141 (313)
T 3kd6_A 70 DTRGIQVIEDGKTFRWAGRYHYDMNTRDTLDTQLNVFAEFDPHV----PQYYRDSKFVCLGN-IDPELQLKVLDQI---D 141 (313)
T ss_dssp EEEEEEEETTCCCEEEEEEECTTSSCEEEEEEECGGGTTCCCCC----CGGGTTCSEEEECS-SCHHHHHHHHTTC---S
T ss_pred CccceEEcCCCCeeeeeeeeeccccccceeecccchHhhcCccc----hHHHccCCEEEEcC-CCHHHHHHHHHHH---h
Confidence 999998876667733211 123345555544444434444321 13478899999955 5667777788776 4
Q ss_pred cCCceEEEeCCCC----CCCCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCceEEE
Q psy14735 172 ESRAKIIVNPSPA----VYPLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSGVVYA 247 (340)
Q Consensus 172 ~~~~~v~~d~~~~----~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 247 (340)
.+.++++||... ..+.+.++++.+|++++|++|++.|++. +++.++++.|+++|++.|+||+|++|++++
T Consensus 142 -~~~~v~~Dp~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~ 215 (313)
T 3kd6_A 142 -DPKLVVCDTMNFWIEGKPEELKKVLARVDVFIVNDSEARLLSGD-----PNLVKTARIIREMGPKTLIIKKGEHGALLF 215 (313)
T ss_dssp -SCSEEEEECCHHHHHHCHHHHHHHHTTCSEEEEEHHHHHHHHSC-----SCHHHHHHHHHTTSCSEEEEECTTSCEEEE
T ss_pred -hCCEEEEcChhhhhhhhHHHHHHHHhcCCEEEeCHHHHHHHhCC-----CCHHHHHHHHHHcCCCEEEEeeCCCcEEEE
Confidence 578899998431 1134567899999999999999999996 578888999999999999999999999999
Q ss_pred ecCCCceEEEccCCCc-CcccCCCcchHHHHHHHHHHHcCCCC-----CHHHHHHHHHHHHHHHhcccCCCCC-CCCccC
Q psy14735 248 TRDNPRLKTITVDHVE-YPIESEGVGDCFVGALAYYLCYFPQL-----PLGEIILRSCHVARQSLFNVGLQNS-FPDKET 320 (340)
Q Consensus 248 ~~~~~~~~~~p~~~~~-~vvdttGaGDaF~ag~~~~l~~~~g~-----~~~~a~~~a~~~Aa~~~~~~g~~~~-~~~~~~ 320 (340)
+++ +.+++|+ +++ +++||+||||+|.|||+++|++ |. ++++|+++|+++|+.+|++.|+.+. .|++++
T Consensus 216 ~~~--~~~~~~~-~~~~~vvdttGAGDaf~a~~~~~l~~--g~~~~~~~l~~a~~~a~~~aa~~v~~~G~~~~~~~~~~e 290 (313)
T 3kd6_A 216 TDN--GIFAAPA-FPLESIYDPTGAGDTFAGGFIGHLAR--CGNTSEAEMRKAVLYGSAMASFCVEQFGPYRYNDLDLLE 290 (313)
T ss_dssp ETT--EEEEECC-CTTCCCSCCTTHHHHHHHHHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHTTSSTTGGGGTCCHHH
T ss_pred ECC--ceEEeCC-CCCCCcCCCCCccHHHHHHHHHHHHc--CCCccccCHHHHHHHHHHHHHHHHeecCCCCCCCCCHHH
Confidence 876 6889999 887 7999999999999999999999 88 8999999999999999999999763 689999
Q ss_pred cchhhhhccccc
Q psy14735 321 LPDNLFSLKCEL 332 (340)
Q Consensus 321 v~~~l~~~~~~~ 332 (340)
+++++....+..
T Consensus 291 v~~~l~~~~~~~ 302 (313)
T 3kd6_A 291 VDDRYQSFLELS 302 (313)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 999987655443
No 50
>1vk4_A PFKB carbohydrate kinase TM0415; structural genomics, JCSG, protein structure initiative, joint center for structural G transferase; 1.91A {Thermotoga maritima} SCOP: c.72.1.1
Probab=100.00 E-value=1.4e-39 Score=293.23 Aligned_cols=269 Identities=14% Similarity=0.155 Sum_probs=216.2
Q ss_pred EEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCCccc
Q psy14735 17 IVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSINTK 96 (340)
Q Consensus 17 I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi~~~ 96 (340)
|.+.|.+..|.+. +.......+||++.|+|++|++||.++.++|.+|+|. +.+++.|++ .||+++
T Consensus 14 ~~~~~~~~~~~~~------------~~~~~~~~~GG~~~NvA~~la~LG~~~~~i~~vG~D~--~~~~~~L~~-~gVd~~ 78 (298)
T 1vk4_A 14 ITFIGHVSKDVNV------------VDGKREIAYGGGVVMGAITSSLLGVKTKVITKCTRED--VSKFSFLRD-NGVEVV 78 (298)
T ss_dssp EEEECCCEEEEEE------------ETTEEEEEEECHHHHHHHHHHHTTCEEEEEEEECTTT--GGGGTTTGG-GTCEEE
T ss_pred EEEeccccCceEe------------ecCeEEEecCCHHHHHHHHHHHcCCceEEEEEEcCCH--HHHHHHHHH-cCCceE
Confidence 5666666666654 4456778899999999999999999999999999997 678899999 999999
Q ss_pred ceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhhccCCcEEEEeCCCCHHHHHHHHHhchhcccCCce
Q psy14735 97 YIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNLLLKAKVIMFQGETPWETTLYCLSKLHVSLESRAK 176 (340)
Q Consensus 97 ~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~a~~~~~~~~~ 176 (340)
++.. ..+|+.+.++ +++|++++..+.+++..+++++++. ..++++++++..+.+...++++.+ ++++.+
T Consensus 79 ~v~~--~~~t~~~~i~-~~~g~~~~~~~~~~~~~l~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~---~~~g~~ 147 (298)
T 1vk4_A 79 FLKS--PRTTSIENRY-GSDPDTRESFLISAADPFTESDLAF-----IEGEAVHINPLWYGEFPEDLIPVL---RRKVMF 147 (298)
T ss_dssp EEEC--SSCEEEEEEC------CCEEEEEECCCCCCGGGGGG-----CCSSEEEECCSSTTSSCGGGHHHH---HHHCSE
T ss_pred EEec--CCCcEEEEEE-cCCCCeeEEEeccccccCCHHHcCc-----CCCCEEEECCcccccccHHHHHHH---HHcCCE
Confidence 8753 3456655544 5578887776677777888776542 578999997654445556777888 778899
Q ss_pred EEEeCCC------------CCCCCchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCce
Q psy14735 177 IIVNPSP------------AVYPLNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSGV 244 (340)
Q Consensus 177 v~~d~~~------------~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~ 244 (340)
+++|+.+ ..|+.+.++++.+|++++|++|++.|++. +++.++++.|.++|++.|+||+ ++|+
T Consensus 148 v~~D~~~~~~~~~~~~~~~~~~~~~~~~l~~~dil~~N~~E~~~l~g~-----~~~~~~~~~l~~~g~~~vvvT~-~~G~ 221 (298)
T 1vk4_A 148 LSADAQGFVRVPENEKLVYRDWEMKEKYLKYLDLFKVDSREAETLTGT-----NDLRESCRIIRSFGAKIILATH-ASGV 221 (298)
T ss_dssp EEEETHHHHEEEETTEEEECCCTTHHHHGGGCSEEEEEHHHHHHHHSC-----SCHHHHHHHHHHTTCSSEEEEE-TTEE
T ss_pred EEEecCccccccccccccccchHHHHhhcccCCEEecCHHHHHHHhCC-----CCHHHHHHHHHhcCCCEEEEEc-CCCc
Confidence 9999973 23345667899999999999999999987 4677888889999999999999 9999
Q ss_pred EEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCccCcch
Q psy14735 245 VYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDKETLPD 323 (340)
Q Consensus 245 ~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~~~v~~ 323 (340)
+++++ +.+++|+ ++++++||+||||+|.|||++++++. |+++++|+++|+++|+.++++.|+.+. |+++++.+
T Consensus 222 ~~~~~---~~~~~~~-~~v~vvDttGAGDaF~a~~~~~l~~~-g~~~~~a~~~A~a~aa~~v~~~G~~~~-~~~~el~~ 294 (298)
T 1vk4_A 222 IVFDG---NFYEASF-RSWSLEGRTGRGDTCTAAFLVGFVFK-KMSIEKATKFAAAVTSVKMRHPGPLRR-EDLEAISG 294 (298)
T ss_dssp EEESS---SEEEEEC-CCSSGGGGTTHHHHHHHHHHHHHHTS-CCCHHHHHHHHHHHHHHHTTSSSSCCG-GGGGGCC-
T ss_pred EEEeC---CEEEecc-CCcccCCCcCccHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHccCCCCCC-CCHHHHhc
Confidence 98865 4778898 88899999999999999999999864 689999999999999999999998764 66666653
No 51
>2yxt_A Pyridoxal kinase; beta sheet with alpha helix, metal ION, transferase; 2.00A {Homo sapiens} PDB: 2yxu_A* 3kbi_A* 3keu_A* 4en4_A* 4eoh_A* 2f7k_A 3fhy_A* 3fhx_A* 2ajp_A* 1lhp_A 1lhr_A* 1rft_A* 1rfu_A* 1rfv_A* 1ygj_A* 1ygk_A* 1yhj_A*
Probab=99.92 E-value=1.4e-24 Score=196.33 Aligned_cols=215 Identities=19% Similarity=0.193 Sum_probs=158.4
Q ss_pred ceeEEEEecCChhhHHHHHHHhhhcCCcccceEee--CCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHHhh--
Q psy14735 67 SVALISKLGNDKFGKSYLEELRKYNSINTKYIWLL--QDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAKNL-- 142 (340)
Q Consensus 67 ~v~~~~~vG~D~~g~~i~~~l~~~~gi~~~~v~~~--~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-- 142 (340)
++.++|.+|+|. |+.+ |++ .||+++++... . .+|+..+ ..+ ..+++++++.+.+.
T Consensus 12 ~~~~~g~vG~D~-g~~i---L~~-~GV~~~~v~~~~~~-~~t~~~~-------------~~g--~~l~~~~i~~~~~~~~ 70 (312)
T 2yxt_A 12 SHVIRGYVGNRA-ATFP---LQV-LGFEIDAVNSVQFS-NHTGYAH-------------WKG--QVLNSDELQELYEGLR 70 (312)
T ss_dssp EEESSSCSTHHH-HHHH---HHH-TTCEEEEEEEEEES-SCTTSSC-------------CCE--EECCHHHHHHHHHHHH
T ss_pred cccCCCccchHh-hHHH---HHH-cCCeEEEEEEEEec-CCCCcCC-------------ccC--ccCCHHHHHHHHHHHH
Confidence 457789999998 8888 999 99999987653 2 1333221 111 24677777654333
Q ss_pred ---ccCCcEEEEeCCCCH---HHHHHHHHhchhcccCCc--eEEEeCCCC--------CC-C-----Cch-hhhhcCcEE
Q psy14735 143 ---LLKAKVIMFQGETPW---ETTLYCLSKLHVSLESRA--KIIVNPSPA--------VY-P-----LNP-IVMILADII 199 (340)
Q Consensus 143 ---~~~~~~v~i~~~~~~---~~~~~~~~~a~~~~~~~~--~v~~d~~~~--------~~-~-----~~~-~~l~~~dil 199 (340)
++++++++++...+. +.+.++++.+ ++++. ++++||... .| . .+. .+++++|++
T Consensus 71 ~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~a---~~~g~~~~vv~Dp~~~~~~~~sg~~~~~~~~~~~l~~~ll~~~dil 147 (312)
T 2yxt_A 71 LNNMNKYDYVLTGYTRDKSFLAMVVDIVQEL---KQQNPRLVYVCDPVLGDKWDGEGSMYVPEDLLPVYKEKVVPLADII 147 (312)
T ss_dssp HTTCCCCSEEEECCCCCHHHHHHHHHHHHHH---HHHCTTCEEEECCCCEEC--CCCEESSCTTHHHHHHHTTGGGCSEE
T ss_pred hcCCccCCEEEECCCCCHHHHHHHHHHHHHH---HhhCCCCeEEECCCcCCCCCCCCCeeCCHHHHHHHHHHhhhhCCEE
Confidence 677899886544453 3445777777 77665 478997532 11 1 122 378899999
Q ss_pred EeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCC------ceEEE-------ecCC---CceEEEccCCCc
Q psy14735 200 CINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGS------GVVYA-------TRDN---PRLKTITVDHVE 263 (340)
Q Consensus 200 ~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~------G~~~~-------~~~~---~~~~~~p~~~~~ 263 (340)
++|++|++.|+|....+.+++.++++.|+++|++.|+||.|+. |++++ ++++ .+.+++|+ +++
T Consensus 148 ~pN~~Ea~~L~g~~~~~~~~~~~~~~~l~~~g~~~VvvT~G~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 226 (312)
T 2yxt_A 148 TPNQFEAELLSGRKIHSQEEALRVMDMLHSMGPDTVVITSSDLPSPQGSNYLIVLGSQRRRNPAGSVVMERIRMDI-RKV 226 (312)
T ss_dssp CCCHHHHHHHHSCCCCSHHHHHHHHHHHHHHSCSEEEECCCSCCCTTCTTEEEEEEEEEC----CCCCEEEEEEEE-ECC
T ss_pred cCCHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCCEEEEecccCCCCCCCceEEEEEeccccccccccccceEEEee-ccc
Confidence 9999999999998777777888999999999999999998876 47665 3311 14678888 777
Q ss_pred CcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcc
Q psy14735 264 YPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFN 308 (340)
Q Consensus 264 ~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~ 308 (340)
++ ||+||||+|.|+|++++++. |+++++|+++|+++|+.++++
T Consensus 227 ~v-dttGAGDaf~a~~~~~l~~~-g~~l~~a~~~A~a~a~~~v~~ 269 (312)
T 2yxt_A 227 DA-VFVGTGDLFAAMLLAWTHKH-PNNLKVACEKTVSTLHHVLQR 269 (312)
T ss_dssp SS-CCSSHHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHHHHHH
T ss_pred CC-CCCCchHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHH
Confidence 76 99999999999999999952 689999999999999888764
No 52
>2ddm_A Pyridoxine kinase; pyridoxal kinase, ribokinase, pyridoxal 5'-phosphate, vitamin B6, phosphorylation, transferase; 2.10A {Escherichia coli} PDB: 2ddo_A* 2ddw_A*
Probab=99.91 E-value=6.6e-24 Score=189.34 Aligned_cols=212 Identities=18% Similarity=0.154 Sum_probs=157.5
Q ss_pred EEEecCChhhHHHHHHHhhhcCCcccceEeeCCCCCceEEEEEcCCCCeEEEEeCCcCCCCCHHHHHHHH----h--hcc
Q psy14735 71 ISKLGNDKFGKSYLEELRKYNSINTKYIWLLQDVTTGVCSKVISNKGTHQTNIIPGANTYLSASDIDAAK----N--LLL 144 (340)
Q Consensus 71 ~~~vG~D~~g~~i~~~l~~~~gi~~~~v~~~~~~~t~~~~i~~~~~g~~~~~~~~~~~~~~~~~~i~~~~----~--~~~ 144 (340)
+|.+|.| .....|++ .||++.++.+ . +..+..|.+.+ .+ ..+++++++... + .++
T Consensus 27 ~g~~G~d----~~~~~l~~-~Gv~~~~v~t--------~-i~~~~~g~~~~---~g--~~~~~~~~~~~~~~l~~~~~~~ 87 (283)
T 2ddm_A 27 YGSVGNS----IAVPAIKQ-NGLNVFAVPT--------V-LLSNTPHYDTF---YG--GAIPDEWFSGYLRALQERDALR 87 (283)
T ss_dssp SSSSTHH----HHHHHHHH-TTCCEEEEEE--------E-EESSCTTSSCC---CE--EECCHHHHHHHHHHHHHTTCCT
T ss_pred CCcchHH----HHHHHHHH-cCCeeeEEeE--------E-EeccCCCcCce---ee--eeCCHHHHHHHHHHHHhcCCcc
Confidence 5556665 24568999 9999887743 1 22244555541 11 345666665422 2 356
Q ss_pred CCcEEEEeCCCC---HHHHHHHHHhchhccc--CCceEEEeCCCC-----CC--CC-c----hhhhhcCcEEEeCHHHHH
Q psy14735 145 KAKVIMFQGETP---WETTLYCLSKLHVSLE--SRAKIIVNPSPA-----VY--PL-N----PIVMILADIICINEQEAE 207 (340)
Q Consensus 145 ~~~~v~i~~~~~---~~~~~~~~~~a~~~~~--~~~~v~~d~~~~-----~~--~~-~----~~~l~~~dil~~n~~E~~ 207 (340)
+++++++++..+ .+.+.++++.+ ++ .+.++++||... .| +. . ..+++++|++++|+.|++
T Consensus 88 ~~~~v~~G~l~~~~~~~~~~~~l~~a---~~~~~g~~vv~Dp~~~~~~~~~~~~~~~~~~~~~~ll~~~dil~pN~~E~~ 164 (283)
T 2ddm_A 88 QLRAVTTGYMGTASQIKILAEWLTAL---RKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNIFELE 164 (283)
T ss_dssp TCCEEEECCCSCHHHHHHHHHHHHHH---HTTCTTCEEEECCCCEETTTEECSCTTHHHHHHHTTGGGCSEECCBHHHHH
T ss_pred cCCEEEECCcCCHHHHHHHHHHHHHH---HhcCCCCeEEECCcccCCCCCcccCHHHHHHHHHhhhhhceEecCCHHHHH
Confidence 789999865444 24556677777 66 789999997532 12 11 1 246788999999999999
Q ss_pred HhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCC-------ceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHH
Q psy14735 208 IITDMKINNEEDLADCMEKLLDMKCNTVIITLGGS-------GVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALA 280 (340)
Q Consensus 208 ~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~-------G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~ 280 (340)
.|+|....+.++..++++.|.++|++.|+||.|++ |+++++++ +.+++|+ +++. +|++||||+|.|+|+
T Consensus 165 ~L~g~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~~~~~~~~G~~~~~~~--~~~~~~~-~~v~-vdt~GAGDaf~a~~~ 240 (283)
T 2ddm_A 165 ILTGKNCRDLDSAIAAAKSLLSDTLKWVVVTSASGNEENQEMQVVVVTAD--SVNVISH-SRVK-TDLKGTGDLFCAQLI 240 (283)
T ss_dssp HHHTSCCSSHHHHHHHHHHHCCSSCCEEEEEC-------CEEEEEEEETT--EEEEEEE-ECCC-CCCCCHHHHHHHHHH
T ss_pred HHhCCCCCCHHHHHHHHHHHHHcCCCEEEEccccCccCCCceeEEEEeCC--ceEEEee-ceeC-CCCCChHHHHHHHHH
Confidence 99998776777888899999989999999999999 88888775 5778888 7775 899999999999999
Q ss_pred HHHHcCCCCCHHHHHHHHHHHHHHHhcccC
Q psy14735 281 YYLCYFPQLPLGEIILRSCHVARQSLFNVG 310 (340)
Q Consensus 281 ~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g 310 (340)
+++++ |+++++|+++|+++|+.++++..
T Consensus 241 ~~l~~--g~~~~~A~~~A~a~a~~~v~~~~ 268 (283)
T 2ddm_A 241 SGLLK--GKALTDAVHRAGLRVLEVMRYTQ 268 (283)
T ss_dssp HHHHT--TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHc--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999 99999999999999999998764
No 53
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=99.90 E-value=3.7e-23 Score=184.91 Aligned_cols=173 Identities=14% Similarity=0.123 Sum_probs=134.7
Q ss_pred CCCHHHHHHHH-hhcc--CCcEEEEeCCCCHHHHHHHHHhchhcccCCce-EEEeCCCC------CCC-----Cch-hhh
Q psy14735 130 YLSASDIDAAK-NLLL--KAKVIMFQGETPWETTLYCLSKLHVSLESRAK-IIVNPSPA------VYP-----LNP-IVM 193 (340)
Q Consensus 130 ~~~~~~i~~~~-~~~~--~~~~v~i~~~~~~~~~~~~~~~a~~~~~~~~~-v~~d~~~~------~~~-----~~~-~~l 193 (340)
.++++.++... ..++ +++++++....+.+....+++.+ ++.+.+ +++||... ++. .+. .++
T Consensus 76 ~~~~~~~~~~~~~l~~~~~~~~v~~G~l~~~~~~~~~~~~~---~~~~~~~vvlDp~~~~~~g~~l~~~~~~~~l~~~ll 152 (288)
T 1jxh_A 76 RIEPDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERL---QRHHVRNVVLDTVMLAKSGDPLLSPSAIETLRVRLL 152 (288)
T ss_dssp ECCHHHHHHHHHHHHTTSCCSEEEECCCCSHHHHHHHHHHH---HHTTCCSEEEECCCC------CCCHHHHHHHHHHTG
T ss_pred eCCHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHHHHH---HHCCCCeEEEcCcccCCCCCccCCHHHHHHHHHHHH
Confidence 45555543322 2233 36888887655778889999999 888886 99998653 121 122 267
Q ss_pred hcCcEEEeCHHHHHHhhcC-CCCChhhHHHHHHHHHhcCCCEEEEEecCCc-----eEEEecCCCceEEEccCCCcCccc
Q psy14735 194 ILADIICINEQEAEIITDM-KINNEEDLADCMEKLLDMKCNTVIITLGGSG-----VVYATRDNPRLKTITVDHVEYPIE 267 (340)
Q Consensus 194 ~~~dil~~n~~E~~~l~~~-~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G-----~~~~~~~~~~~~~~p~~~~~~vvd 267 (340)
+.+|++++|+.|++.|++. ...+.++..++++.|.++|++.|+||.|++| +++++++ +.+++|+ ++++++|
T Consensus 153 ~~~dil~pN~~Ea~~L~g~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~G~~G~~~~~~~~~~~~--~~~~~~~-~~~~~vd 229 (288)
T 1jxh_A 153 PQVSLITPNLPEAAALLDAPHARTEQEMLAQGRALLAMGCEAVLMKGGHLEDAQSPDWLFTRE--GEQRFSA-PRVNTKN 229 (288)
T ss_dssp GGCSEEECBHHHHHHHHTCCCCCSHHHHHHHHHHHHHTTCSEEEEBC---------CEEECSS--CEEEC----CCCCSC
T ss_pred hhCcEEcCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhCCCEEEEeccCCCCCceeEEEEECC--eEEEEec-cccCCCC
Confidence 8999999999999999998 7667778889999999999999999999999 8888765 5778888 7888999
Q ss_pred CCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhcccC
Q psy14735 268 SEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNVG 310 (340)
Q Consensus 268 ttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g 310 (340)
|+||||+|.|+|++++++ |+++++|+++|+++|+.+++...
T Consensus 230 ttGAGD~f~a~~~a~l~~--g~~~~~A~~~A~a~a~~~v~~~~ 270 (288)
T 1jxh_A 230 THGTGCTLSAALAALRPR--HRSWGETVNEAKAWLSAALAQAD 270 (288)
T ss_dssp CBTHHHHHHHHHHHHGGG--SSSHHHHHHHHHHHHHHHHTTGG
T ss_pred CCCchHHHHHHHHHHHHc--CCCHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999 99999999999999999998763
No 54
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=99.89 E-value=7.9e-23 Score=179.88 Aligned_cols=157 Identities=17% Similarity=0.161 Sum_probs=130.8
Q ss_pred CCcEEEEeCCCCHHHHHHHHHhchhcccCC-ceEEEeCCCC------CCC-----Cc-hhhhhcCcEEEeCHHHHHHhhc
Q psy14735 145 KAKVIMFQGETPWETTLYCLSKLHVSLESR-AKIIVNPSPA------VYP-----LN-PIVMILADIICINEQEAEIITD 211 (340)
Q Consensus 145 ~~~~v~i~~~~~~~~~~~~~~~a~~~~~~~-~~v~~d~~~~------~~~-----~~-~~~l~~~dil~~n~~E~~~l~~ 211 (340)
+.+++++....+.+....+++.+ ++++ .++++||... ++. .+ ..+++.+|++++|+.|++.|+|
T Consensus 70 ~~~~v~~G~l~~~~~~~~~~~~~---~~~~~~~vv~Dp~~~~~~g~~l~~~~~~~~~~~~ll~~~dil~pN~~E~~~L~g 146 (258)
T 1ub0_A 70 PLHAAKTGALGDAAIVEAVAEAV---RRFGVRPLVVDPVMVAKSGDPLLAKEAAAALKERLFPLADLVTPNRLEAEALLG 146 (258)
T ss_dssp CCSEEEECCCCSHHHHHHHHHHH---HHTTCCSEEECCCC---------CHHHHHHHHHHTGGGCSEECCBHHHHHHHHC
T ss_pred CCCEEEECCcCCHHHHHHHHHHH---HhCCCCcEEECCeeecCCCCcccChHHHHHHHHhhcccCeEEeCCHHHHHHHhC
Confidence 46787776544567788888888 7777 7999998542 221 12 3467889999999999999999
Q ss_pred CCCCChhhHHHHHHHHHhcCCCEEEEEecCC-c----eEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcC
Q psy14735 212 MKINNEEDLADCMEKLLDMKCNTVIITLGGS-G----VVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYF 286 (340)
Q Consensus 212 ~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~-G----~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~ 286 (340)
.+..+.++..++++.|.++|++.|++|.|++ | +++++++ +.+++|+ ++++++||+||||+|.|+|++++++
T Consensus 147 ~~~~~~~~~~~~a~~l~~~g~~~vvvt~g~~~G~~~~~~~~~~~--~~~~~~~-~~~~~~dt~GaGD~f~a~~~~~l~~- 222 (258)
T 1ub0_A 147 RPIRTLKEAEEAAKALLALGPKAVLLKGGHLEGEEAVDLLATRG--GVLRFSA-PRVHTRNTHGTGCTLSAAIAALLAK- 222 (258)
T ss_dssp SCCCSHHHHHHHHHHHHTTSCSCEEEEEEECC---EEEEEEETT--EEEEEEE-CCCCCSCCTTHHHHHHHHHHHHHHT-
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEccCCCCCCceEEEEEeCC--eEEEEec-cccCCCCCCChHHHHHHHHHHHHHc-
Confidence 8777777888999999999999999999998 8 7777765 6788888 8889999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhccc
Q psy14735 287 PQLPLGEIILRSCHVARQSLFNV 309 (340)
Q Consensus 287 ~g~~~~~a~~~a~~~Aa~~~~~~ 309 (340)
|+++++|+++|+++++.++++.
T Consensus 223 -g~~~~~a~~~a~~~~~~~~~~~ 244 (258)
T 1ub0_A 223 -GRPLAEAVAEAKAYLTRALKTA 244 (258)
T ss_dssp -TCCHHHHHHHHHHHHHHHHHTC
T ss_pred -CCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998764
No 55
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=99.87 E-value=3.8e-21 Score=170.33 Aligned_cols=158 Identities=15% Similarity=0.153 Sum_probs=132.7
Q ss_pred CCcEEEEeCCCCHHHHHHHHHhchhcccCCc-eEEEeCCCCC--C---------CCch-hhhhcCcEEEeCHHHHHHhhc
Q psy14735 145 KAKVIMFQGETPWETTLYCLSKLHVSLESRA-KIIVNPSPAV--Y---------PLNP-IVMILADIICINEQEAEIITD 211 (340)
Q Consensus 145 ~~~~v~i~~~~~~~~~~~~~~~a~~~~~~~~-~v~~d~~~~~--~---------~~~~-~~l~~~dil~~n~~E~~~l~~ 211 (340)
+++++++....+.+....+++.+ ++.+. ++++||.... + +.+. .+++.+|++++|+.|++.|+|
T Consensus 74 ~~d~v~~G~l~~~~~~~~~~~~~---~~~~~~~vv~Dp~~~~~~~~~~~~~~~~~~l~~~ll~~~diltpN~~E~~~L~g 150 (271)
T 2i5b_A 74 GVDAMKTGMLPTVDIIELAAKTI---KEKQLKNVVIDPVMVCKGANEVLYPEHAQALREQLAPLATVITPNLFEASQLSG 150 (271)
T ss_dssp CCSEEEECCCCSHHHHHHHHHHH---HHTTCSSEEECCCCSSBCSSSBSSHHHHHHHHHHTGGGCSEECCBHHHHHHHHT
T ss_pred CCCEEEECCCCCHHHHHHHHHHH---HhCCCCCEEEcCCcCCCCCCcCcCHHHHHHHHHHhHhhCcEEcCCHHHHHHHhC
Confidence 67888886644677888888988 88888 5999985321 1 1122 567889999999999999999
Q ss_pred CC-CCChhhHHHHHHHHHhcCCCEEEEEecC--Cce----EEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHH
Q psy14735 212 MK-INNEEDLADCMEKLLDMKCNTVIITLGG--SGV----VYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLC 284 (340)
Q Consensus 212 ~~-~~~~~~~~~~~~~l~~~g~~~vvvt~G~--~G~----~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~ 284 (340)
.. ..+.++..++++.|.++|++.|++|.|+ +|+ ++++++ +.+++|+ ++++++|++||||+|.|+|+++++
T Consensus 151 ~~~~~~~~~~~~~a~~l~~~g~~~Vvvt~g~~~~g~~~~~~~~~~~--~~~~~~~-~~~~~~dt~GaGD~f~a~~~~~l~ 227 (271)
T 2i5b_A 151 MDELKTVDDMIEAAKKIHALGAQYVVITGGGKLKHEKAVDVLYDGE--TAEVLES-EMIDTPYTHGAGCTFSAAVTAELA 227 (271)
T ss_dssp CCCCCSHHHHHHHHHHHHTTTCSEEEEECGGGSCSSSEEEEEECSS--CEEEEEE-CCCCCSCCBTHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCCCCCCceEEEEEeCC--eEEEEec-cccCCCCCCChHHHHHHHHHHHHH
Confidence 87 6667788899999999999999999999 784 666654 6788888 888899999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhcccC
Q psy14735 285 YFPQLPLGEIILRSCHVARQSLFNVG 310 (340)
Q Consensus 285 ~~~g~~~~~a~~~a~~~Aa~~~~~~g 310 (340)
+ |+++++|+++|+++++.+++...
T Consensus 228 ~--g~~~~~A~~~A~~~~~~~~~~~~ 251 (271)
T 2i5b_A 228 K--GAEVKEAIYAAKEFITAAIKESF 251 (271)
T ss_dssp T--TCCHHHHHHHHHHHHHHHHHTCC
T ss_pred c--CCCHHHHHHHHHHHHHHHHHHhh
Confidence 9 99999999999999999998753
No 56
>3pzs_A PM kinase, pyridoxamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; HET: MSE; 1.89A {Yersinia pestis} SCOP: c.72.1.5 PDB: 1td2_A* 1vi9_A*
Probab=99.81 E-value=3.6e-19 Score=158.94 Aligned_cols=171 Identities=17% Similarity=0.163 Sum_probs=131.0
Q ss_pred CCCHHHHHHHHhh------ccCCcEEEEeCCC-CH---HHHHHHHHhchhcccCC--ceEEEeCC----C--CCC-----
Q psy14735 130 YLSASDIDAAKNL------LLKAKVIMFQGET-PW---ETTLYCLSKLHVSLESR--AKIIVNPS----P--AVY----- 186 (340)
Q Consensus 130 ~~~~~~i~~~~~~------~~~~~~v~i~~~~-~~---~~~~~~~~~a~~~~~~~--~~v~~d~~----~--~~~----- 186 (340)
.+++++++.+.+. +.++|++++ |.. +. +.+.++++.+ ++.+ .++++||. . .++
T Consensus 56 ~~~~~~~~~~~~~~~~~~~l~~~d~v~~-G~l~~~~~~~~v~~~l~~~---~~~~~~~~vv~DPVm~~~~~~~~~~~~~~ 131 (289)
T 3pzs_A 56 VMPASHLTDIVQGIADIDRLKDCDAVLS-GYIGSPEQGSHILAAVAQV---KQANPDAWYFCDPVMGHPEKGCIVAPGVA 131 (289)
T ss_dssp ECCHHHHHHHHHHHHHTTCGGGCCEEEE-CCCSSHHHHHHHHHHHHHH---HHHCTTCEEEECCCCEETTTEECSCHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCccCCCEEEE-CCCCCHHHHHHHHHHHHHH---HhhCCCCeEEEcCccccCCCCcccCHHHH
Confidence 4566666554432 257888654 544 33 3455566666 6544 78999973 1 112
Q ss_pred CCch-hhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEec-CCce-------EEEecCCCceEEE
Q psy14735 187 PLNP-IVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLG-GSGV-------VYATRDNPRLKTI 257 (340)
Q Consensus 187 ~~~~-~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G-~~G~-------~~~~~~~~~~~~~ 257 (340)
+.+. .+++.+|++++|+.|++.|+|.++.+.++..++++.|+++|++.|+||.| .+|+ ++++++ +.+++
T Consensus 132 ~~l~~~ll~~~diitpN~~E~~~L~g~~~~~~~~~~~aa~~l~~~g~~~Vvvt~~~~~G~~~~~~~~~~~~~~--~~~~~ 209 (289)
T 3pzs_A 132 EFFCNEALPASDMIAPNLLELEQLSGERVENVEQAVQVARSLCARGPKVVLVKHLSRAGYHADCFEMLLVTAD--DAWHI 209 (289)
T ss_dssp HHHHHTHHHHCSEECCCHHHHHHHHTSCCCSHHHHHHHHHHHHTTSCSEEEECCCGGGSSCTTEEEEEEECSS--CEEEE
T ss_pred HHHHHHhhccCCEEeCCHHHHHHHhCCCCCCHHHHHHHHHHHHHHCCCEEEEecccCCCCCCCeEEEEEEeCC--eEEEE
Confidence 1222 47889999999999999999998888889999999999999999999985 4776 666665 57777
Q ss_pred ccCCCcCc--ccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhccc
Q psy14735 258 TVDHVEYP--IESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNV 309 (340)
Q Consensus 258 p~~~~~~v--vdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~ 309 (340)
+. +.+++ +|++|+||+|.|+|++++++ |+++++|+++|+++++.+++..
T Consensus 210 ~~-~~~~~~v~dt~GaGD~f~a~~~~~l~~--g~~~~~A~~~A~~~~~~~i~~t 260 (289)
T 3pzs_A 210 CR-PLVDFGKRQPVGVGDLTSGLLLVNLLK--GEPLDKALEHVTAAVYEVMLKT 260 (289)
T ss_dssp EE-ECCCCTTSCCTTHHHHHHHHHHHHHHT--TCCHHHHHHHHHHHHHHHHHHH
T ss_pred Ee-eeecCCCCCCCcHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 77 66666 89999999999999999999 9999999999999988887753
No 57
>3h74_A Pyridoxal kinase; PSI-II, structural genomics, prote structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.30A {Lactobacillus plantarum} PDB: 3hyo_A* 3ibq_A*
Probab=99.80 E-value=3.6e-19 Score=158.10 Aligned_cols=156 Identities=17% Similarity=0.153 Sum_probs=129.2
Q ss_pred CCcEEEEeCCCCHHHHHHHHHhchhcccC-CceEEEeCCC----CCCC--------CchhhhhcCcEEEeCHHHHHHhhc
Q psy14735 145 KAKVIMFQGETPWETTLYCLSKLHVSLES-RAKIIVNPSP----AVYP--------LNPIVMILADIICINEQEAEIITD 211 (340)
Q Consensus 145 ~~~~v~i~~~~~~~~~~~~~~~a~~~~~~-~~~v~~d~~~----~~~~--------~~~~~l~~~dil~~n~~E~~~l~~ 211 (340)
+.+.+.+....+.+....+.+.+ ++. +.++++||.. .+|. .+.++++.+|++++|..|++.|+|
T Consensus 74 ~~daik~G~l~s~~~i~~v~~~l---~~~~~~~vv~DPv~~~~g~l~~l~~~~~~~~l~~ll~~adiitpN~~Ea~~L~g 150 (282)
T 3h74_A 74 HFDQALIGYVGSVALCQQITTYL---EQQTLSLLVVDPVLGDLGQLYQGFDQDYVAAMRQLIQQADVILPNTTEAALLTG 150 (282)
T ss_dssp CCSEEEECCCCSHHHHHHHHHHH---HHSCCSEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCCHHHHHHHHT
T ss_pred ccCEEEECCCCCHHHHHHHHHHH---HHCCCCcEEEcCeeecCCCCCCCCCHHHHHHHHHHhccCCEECCCHHHHHHHhC
Confidence 67889986655677777777777 543 6789999942 2121 234789999999999999999999
Q ss_pred CCCCChhhHHHHHHHHHh-cCC-CEEEEEecC----CceEEEe-cCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHH
Q psy14735 212 MKINNEEDLADCMEKLLD-MKC-NTVIITLGG----SGVVYAT-RDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLC 284 (340)
Q Consensus 212 ~~~~~~~~~~~~~~~l~~-~g~-~~vvvt~G~----~G~~~~~-~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~ 284 (340)
.++.+.++..++++.|.+ +|+ +.|+||.|. .|+++++ ++ +.++++. +++. +|++|+||+|.|+|+++|+
T Consensus 151 ~~~~~~~~~~~aa~~L~~~~g~~~~Vvvt~G~~~~~~g~~~~~~~~--~~~~~~~-~~v~-~dt~GaGD~fsaai~a~l~ 226 (282)
T 3h74_A 151 APYQVTPDLEVILPALQAQLKTGAHAVITDVQRADQIGCAWLDEAG--HVQYCGA-RRLP-GHYNGTGDTLAAVIAGLLG 226 (282)
T ss_dssp CCCCSSCCHHHHHHHHHTTSCTTCEECEEEEEETTEEEEEEECTTS--CEEEEEE-ECCS-SCCTTHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCCEEEEEecCCCCceEEEEEeCCC--eEEEEEe-cCCC-CCCcCHHHHHHHHHHHHHH
Confidence 887777789999999999 899 999999995 7888885 43 5777887 6664 8999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhccc
Q psy14735 285 YFPQLPLGEIILRSCHVARQSLFNV 309 (340)
Q Consensus 285 ~~~g~~~~~a~~~a~~~Aa~~~~~~ 309 (340)
+ |+++++|+++|+++++.+++..
T Consensus 227 ~--g~~l~~A~~~A~~~~~~ai~~~ 249 (282)
T 3h74_A 227 R--GYPLAPTLARANQWLNMAVAET 249 (282)
T ss_dssp T--TCCHHHHHHHHHHHHHHHHHHH
T ss_pred C--CCCHHHHHHHHHHHHHHHHHHH
Confidence 9 9999999999999999998764
No 58
>3mbh_A Putative phosphomethylpyrimidine kinase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PXL; 2.00A {Bacteroides thetaiotaomicron} PDB: 3mbj_A*
Probab=99.79 E-value=2.1e-18 Score=153.98 Aligned_cols=176 Identities=19% Similarity=0.141 Sum_probs=132.9
Q ss_pred CCcEEEEeCCCCH---HHHHHHHHhchhcccCCceEEEeCCCC----CCC--------CchhhhhcCcEEEeCHHHHHHh
Q psy14735 145 KAKVIMFQGETPW---ETTLYCLSKLHVSLESRAKIIVNPSPA----VYP--------LNPIVMILADIICINEQEAEII 209 (340)
Q Consensus 145 ~~~~v~i~~~~~~---~~~~~~~~~a~~~~~~~~~v~~d~~~~----~~~--------~~~~~l~~~dil~~n~~E~~~l 209 (340)
..+.+.+..-.+. +.+.++++.+ ++.+.++++||... +|. .+.++++.+|++++|+.|++.|
T Consensus 77 ~~~aik~G~l~s~~~i~~v~~~l~~~---~~~~~~vv~DPv~~~~g~l~~~~~~~~~~~~~~ll~~adiitpN~~Ea~~L 153 (291)
T 3mbh_A 77 QFDAIYTGYLGSPRQIQIVSDFIKDF---RQPDSLIVADPVLGDNGRLYTNFDMEMVKEMRHLITKADVITPNLTELFYL 153 (291)
T ss_dssp CCSEEEECCCSSTTHHHHHHHHHHHH---CCTTCEEEECCCCEETTEECTTCCHHHHHHHHHHGGGCSEECCBHHHHHHH
T ss_pred ccCEEEECCCCCHHHHHHHHHHHHHh---cCCCCcEEECceeeeCCCCCCCCCHHHHHHHHHHhccCCEEeCCHHHHHHH
Confidence 6788888544343 4445555555 56678999999532 222 2357899999999999999999
Q ss_pred hcCCCC---ChhhHHHHHHHHHhcCCCEEEEEecC-------CceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHH
Q psy14735 210 TDMKIN---NEEDLADCMEKLLDMKCNTVIITLGG-------SGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGAL 279 (340)
Q Consensus 210 ~~~~~~---~~~~~~~~~~~l~~~g~~~vvvt~G~-------~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~ 279 (340)
+|.++. +.++..++++.|+++|++.|+||.|+ .|+++++.++.+.++++. +++. +|++|+||+|.|+|
T Consensus 154 ~g~~~~~~~~~~~~~~aa~~L~~~g~~~Vvvtgg~~~~~~g~~g~~~~~~~~~~~~~~~~-~~~~-~dt~GaGD~f~aai 231 (291)
T 3mbh_A 154 LDEPYKADSTDEELKEYLRLLSDKGPQVVIITSVPVHDEPHKTSVYAYNRQGNRYWKVTC-PYLP-AHYPGTGDTFTSVI 231 (291)
T ss_dssp HTCCCCSCCCHHHHHHHHHHHHHTSCSEEEEEEEEETTEEEEEEEEEEETTTTEEEEEEE-SCCG-GGSTTHHHHHHHHH
T ss_pred hCCCCCCCCCHHHHHHHHHHHHhhCCCEEEEEeccccCCCCcEEEEEEeCCCCeEEEEEe-cccC-CCCCChHHHHHHHH
Confidence 998764 66788999999999999999999654 577788764224667888 6665 89999999999999
Q ss_pred HHHHHcCCCCCHHHHHHHHHHHHHHHhcccCCCCCCCCc--cCcchhhhhc
Q psy14735 280 AYYLCYFPQLPLGEIILRSCHVARQSLFNVGLQNSFPDK--ETLPDNLFSL 328 (340)
Q Consensus 280 ~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~g~~~~~~~~--~~v~~~l~~~ 328 (340)
++++++ |+++++|+++|+++++.++++.-. .+.|.+ -.++++|..+
T Consensus 232 ~a~l~~--g~~l~~A~~~A~~~~~~ai~~~~~-~~~~~~~gv~~e~~L~~l 279 (291)
T 3mbh_A 232 TGSLMQ--GDSLPMALDRATQFILQGIRATFG-YEYDNREGILLEKVLHNL 279 (291)
T ss_dssp HHHHHT--TCCHHHHHHHHHHHHHHHHHTTTT-SCCCGGGCSCHHHHGGGT
T ss_pred HHHHHc--CCCHHHHHHHHHHHHHHHHHHHHh-cCCCcccCCcHHHHHHHH
Confidence 999999 999999999999999988876422 223333 3355555543
No 59
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=99.78 E-value=3.9e-18 Score=152.70 Aligned_cols=175 Identities=18% Similarity=0.145 Sum_probs=126.4
Q ss_pred CCCHHHHHHHHhhc------cCCcEEEEeCCCCHHHHHHHHHhchhcccCC------ceEEEeCC----CCCC------C
Q psy14735 130 YLSASDIDAAKNLL------LKAKVIMFQGETPWETTLYCLSKLHVSLESR------AKIIVNPS----PAVY------P 187 (340)
Q Consensus 130 ~~~~~~i~~~~~~~------~~~~~v~i~~~~~~~~~~~~~~~a~~~~~~~------~~v~~d~~----~~~~------~ 187 (340)
.++.++++.+.+.+ .++|+|.+..-.+.+....+.+.++..++.+ .++++||. +..+ +
T Consensus 55 ~~~~~ql~~~~~~~~~~~~~~~~daV~tG~l~s~~~i~~v~~~l~~~k~~~~~~~~~~~vv~DPVm~d~G~~~~~~~~~~ 134 (300)
T 3zs7_A 55 RMSLQEYDELMEGVRANNFLSNYRYILTGYINNVDIIGRIRDTLKEVRELREKEDKKLTFICDPVMGDDGIMYCKKEVLD 134 (300)
T ss_dssp ECCHHHHHHHHHHHHHTTCGGGCSEEEECCCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCC---------CTHHH
T ss_pred cCCHHHHHHHHHHHHhcCCcccCCEEEECCCCCHHHHHHHHHHHHHHHhhCcCcCCCceEEEccccccCCCeecCHHHHH
Confidence 45566665544332 4678877755445555444444331114444 68999983 2222 1
Q ss_pred CchhhhhcCcEEEeCHHHHHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCc----e--EEEe-cC----CCceEE
Q psy14735 188 LNPIVMILADIICINEQEAEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSG----V--VYAT-RD----NPRLKT 256 (340)
Q Consensus 188 ~~~~~l~~~dil~~n~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G----~--~~~~-~~----~~~~~~ 256 (340)
.+.++++.+|++++|..|++.|+|.++.+.++..++++.|+++|++.|+||.|+.| . +++. .+ +.+.++
T Consensus 135 ~~~~Ll~~adiitPN~~Ea~~L~g~~~~~~~~~~~aa~~L~~~G~~~Vvvt~g~~g~~~~~~~~l~~~~~~~~~~~~~~~ 214 (300)
T 3zs7_A 135 AYRELVPLADIVTPNYFEASLLSGVTVNDLSSAILAADWFHNCGVAHVIIKSFREQENPTHLRFLYSVKEGSEAAVRRFS 214 (300)
T ss_dssp HHHHHGGGCSEECCCHHHHHHHHSSCCCSHHHHHHHHHHHHHHTCSEEEEEEEC---CCSEEEEEEEECCSTTSCCEEEE
T ss_pred HHHHHhhhCCEecCCHHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCEEEEecCcCCCCCceEEEEEeccccccCCCeEEE
Confidence 23458999999999999999999998888889999999999999999999999988 2 3443 31 015677
Q ss_pred EccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHhccc
Q psy14735 257 ITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHVARQSLFNV 309 (340)
Q Consensus 257 ~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~Aa~~~~~~ 309 (340)
++. +.++. |++|+||+|.|+|+++| + |+++++|+++|..+...+++.-
T Consensus 215 ~~~-~~v~~-~~~GtGD~fsaal~a~l-~--g~~~~~Av~~A~~~v~~~i~~t 262 (300)
T 3zs7_A 215 GVV-PYHEG-RYTGTGDVFAACLLAFS-H--SHPMDVAIGKSMAVLQELIIAT 262 (300)
T ss_dssp EEE-ECCSS-CBTTHHHHHHHHHHHHH-T--TSCHHHHHHHHHHHHHHHHHHT
T ss_pred EEe-ccCCC-CCcCHHHHHHHHHHHHH-c--CCCHHHHHHHHHHHHHHHHHHH
Confidence 777 66665 89999999999999999 9 9999999999999977777653
No 60
>1ekq_A Hydroxyethylthiazole kinase; alpha-beta, transferase; 1.50A {Bacillus subtilis} SCOP: c.72.1.2 PDB: 1ekk_A 1c3q_A 1esj_A 1esq_A*
Probab=99.66 E-value=6.9e-16 Score=136.23 Aligned_cols=148 Identities=13% Similarity=0.072 Sum_probs=109.1
Q ss_pred ccCCcEEEEe-CCCC---HHHHHHHHHhchhcccCCceEEEeCCCCCC-----CCchhhhh--cCcEEEeCHHHHHHhhc
Q psy14735 143 LLKAKVIMFQ-GETP---WETTLYCLSKLHVSLESRAKIIVNPSPAVY-----PLNPIVMI--LADIICINEQEAEIITD 211 (340)
Q Consensus 143 ~~~~~~v~i~-~~~~---~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~-----~~~~~~l~--~~dil~~n~~E~~~l~~ 211 (340)
++.++++++. |..+ .+...++++.+ ++.+.|+++||..... +...++++ .++++++|..|++.|+|
T Consensus 56 ~~~a~~lvi~~G~~~~~~~~~~~~~~~~a---~~~~~pvVlDp~g~~~~~~~~~~~~~ll~~~~~~vitPN~~E~~~L~g 132 (272)
T 1ekq_A 56 AKIAGALVLNIGTLSKESVEAMIIAGKSA---NEHGVPVILDPVGAGATPFRTESARDIIREVRLAAIRGNAAEIAHTVG 132 (272)
T ss_dssp HHHSSEEEEECTTCCHHHHHHHHHHHHHH---HHTTCCEEEECTTBTTBHHHHHHHHHHHHHSCCSEEEECHHHHHHHCC
T ss_pred HHhCCEEEEECCCCCHHHHHHHHHHHHHH---HhcCCeEEEeCCCcCcccchHHHHHHHHccCCCeEECCCHHHHHHHhC
Confidence 5568888884 4443 34566677777 7889999999975421 11125666 89999999999999999
Q ss_pred CC-C--------CChhhHHHHHHHHHhcCCCEEEEEecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHH
Q psy14735 212 MK-I--------NNEEDLADCMEKLLDMKCNTVIITLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYY 282 (340)
Q Consensus 212 ~~-~--------~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~ 282 (340)
.. . .+.++..++++.|.+++...|++| |..+ ++.+++ +.++++. ....+.|++|+||+|.|.+.+.
T Consensus 133 ~~~~~~~gvd~~~~~~~~~~aa~~l~~~~~~vVv~~-G~~~-~i~~~~--~~~~~~~-~~~~~~~ttGaGD~lag~iaa~ 207 (272)
T 1ekq_A 133 VTDWLIKGVDAGEGGGDIIRLAQQAAQKLNTVIAIT-GEVD-VIADTS--HVYTLHN-GHKLLTKVTGAGCLLTSVVGAF 207 (272)
T ss_dssp ---------------HHHHHHHHHHHHHHTSEEEEC-SSSE-EEECSS--CEEEECC-CCGGGGGSTTHHHHHHHHHHHH
T ss_pred CCcccccCccCCCCHHHHHHHHHHHHHHcCCEEEEE-CCCC-EEEeCC--EEEEEcC-CCccccCccCchHHHHHHHHHH
Confidence 76 4 345677788888887644455555 8887 455544 5778887 6667789999999999999999
Q ss_pred HHcCCCCCHHHHHHHHHH
Q psy14735 283 LCYFPQLPLGEIILRSCH 300 (340)
Q Consensus 283 l~~~~g~~~~~a~~~a~~ 300 (340)
+.+ |.++.+|+.+|+.
T Consensus 208 la~--g~~~~~A~~~A~~ 223 (272)
T 1ekq_A 208 CAV--EENPLFAAIAAIS 223 (272)
T ss_dssp HTT--CSSHHHHHHHHHH
T ss_pred Hhc--CCCHHHHHHHHHH
Confidence 999 9999999999986
No 61
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=99.55 E-value=5e-14 Score=136.09 Aligned_cols=157 Identities=18% Similarity=0.179 Sum_probs=118.9
Q ss_pred CCcEEEEeCCCCHHHHHHHHHhchhcccCCceEEEeCCCC------CC-C----Cch-hhhhcCcEEEeCHHHHHHhhcC
Q psy14735 145 KAKVIMFQGETPWETTLYCLSKLHVSLESRAKIIVNPSPA------VY-P----LNP-IVMILADIICINEQEAEIITDM 212 (340)
Q Consensus 145 ~~~~v~i~~~~~~~~~~~~~~~a~~~~~~~~~v~~d~~~~------~~-~----~~~-~~l~~~dil~~n~~E~~~l~~~ 212 (340)
++++|.++.- +.+....+.+.++..++.+.++++||.-. ++ + .+. .+++.+|++++|..|++.|+|.
T Consensus 91 ~~daIkiG~l-s~~~i~~v~~~l~~~~~~~~~vVlDPvm~a~~g~~l~~~~~~~~l~~~Ll~~a~iitPN~~Ea~~L~g~ 169 (550)
T 3rm5_A 91 KCNVIKTGML-TAAAIEVLHEKLLQLGENRPKLVVDPVLVATSGSSLAGKDIVSLITEKVAPFADILTPNIPECYKLLGE 169 (550)
T ss_dssp CCSEEEECSC-CHHHHHHHHHHHHHHGGGSCEEEECCCC---------CTTHHHHHHHHTGGGCSEECCBHHHHHHHHSC
T ss_pred CCCEEEECCC-CHHHHHHHHHHHHHhcccCCCEEEecceecCCCCcCCCHHHHHHHHHHhhCcceEEecCHHHHHHHhCC
Confidence 6889998766 76666655555521144578999999421 11 1 122 6788999999999999999997
Q ss_pred C--CCChhhHHHHHHHHHhcCC-CEEEEEecCCc--------e--EEEe-cCCCceEEEccCCCcCcccCCCcchHHHHH
Q psy14735 213 K--INNEEDLADCMEKLLDMKC-NTVIITLGGSG--------V--VYAT-RDNPRLKTITVDHVEYPIESEGVGDCFVGA 278 (340)
Q Consensus 213 ~--~~~~~~~~~~~~~l~~~g~-~~vvvt~G~~G--------~--~~~~-~~~~~~~~~p~~~~~~vvdttGaGDaF~ag 278 (340)
. +.+.++..++++.|.+++. +.||||.|..+ + +++. .++ +.++++. +.++.+|++|+||+|.|+
T Consensus 170 ~~~i~~~~d~~~aa~~L~~~g~~~~VvvkgG~~~~~g~~~~~~~d~l~~~~~~-~~~~~~~-~~v~~~~t~GtGD~fsaa 247 (550)
T 3rm5_A 170 ERKVNGLQDIFQIAKDLAKITKCSNILVKGGHIPWNDEKEKYITDVLFLGAEQ-KFIIFKG-NFVNTTHTHGTGCTLASA 247 (550)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHCCSCEEEEECC-------CCEEEEEEEETTTT-EEEEEEE-ECCCCSCCBTHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCcccCCCCeEEEEEEEcCCC-eEEEEEe-cCcCCCCCcChhHHHHHH
Confidence 4 5667788999999998876 89999998863 3 4554 332 6777888 777788999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHHHHHHHHHHh
Q psy14735 279 LAYYLCYFPQLPLGEIILRSCHVARQSL 306 (340)
Q Consensus 279 ~~~~l~~~~g~~~~~a~~~a~~~Aa~~~ 306 (340)
++++|++ |.++++|++.|+..-...+
T Consensus 248 iaa~La~--G~~l~eAv~~A~~~v~~ai 273 (550)
T 3rm5_A 248 IASNLAR--GYSLPQSVYGGIEYVQNAV 273 (550)
T ss_dssp HHHHHHT--TCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHc--CCCHHHHHHHHHHHHHHHH
Confidence 9999999 9999999999996544443
No 62
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=99.28 E-value=2e-11 Score=106.97 Aligned_cols=153 Identities=13% Similarity=0.035 Sum_probs=109.4
Q ss_pred hccCCcEEEEeCCCC-HH---HHHHHHHhchhcccCCceEEEeCCCCCC-----CCchhhhh-cCcEEEeCHHHHHHhhc
Q psy14735 142 LLLKAKVIMFQGETP-WE---TTLYCLSKLHVSLESRAKIIVNPSPAVY-----PLNPIVMI-LADIICINEQEAEIITD 211 (340)
Q Consensus 142 ~~~~~~~v~i~~~~~-~~---~~~~~~~~a~~~~~~~~~v~~d~~~~~~-----~~~~~~l~-~~dil~~n~~E~~~l~~ 211 (340)
.++.++++++...+. .+ ....+++.+ ++.+.|+++||..... +....+++ .+++++||..|+..|+|
T Consensus 53 ~~~~~dalvi~~G~~~~~~~~~~~~~~~~a---~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~~~vITPN~~E~~~L~g 129 (265)
T 1v8a_A 53 MIRLADAVVINIGTLDSGWRRSMVKATEIA---NELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLG 129 (265)
T ss_dssp HHHHCSEEEEECTTCCHHHHHHHHHHHHHH---HHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHHH
T ss_pred HHHHCCEEEEEECCCCHHHHHHHHHHHHHH---HHcCCcEEEcCccccccccCHHHHHHHHHhCCcEEcCCHHHHHHHhC
Confidence 356789999975443 33 445666777 7789999999986321 11123443 38999999999999998
Q ss_pred CCC-----C----ChhhHHHHHHHHHhcCCCEEEEEecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHH
Q psy14735 212 MKI-----N----NEEDLADCMEKLLDMKCNTVIITLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYY 282 (340)
Q Consensus 212 ~~~-----~----~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~ 282 (340)
... + ..++..++++.|.+++...|++| |..+. +++.+ +.+.++. ......+++|+||+|.|.+...
T Consensus 130 ~~~~~~gvd~~~~~~~~~~~aa~~la~~~~~~Vvlk-G~~d~-i~~~~--~~~~~~~-g~~~~~~~~GtGD~Lsg~iaa~ 204 (265)
T 1v8a_A 130 EEGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GAVDY-VSDGR--RTFAVYN-GHELLGRVTGTGCMVAALTGAF 204 (265)
T ss_dssp HHC----------CHHHHHHHHHHHHHHTTSEEEEE-SSSEE-EECSS--CEEEECC-CCGGGGGSTTHHHHHHHHHHHH
T ss_pred CcccccCcCcccccHHHHHHHHHHHHHHhCcEEEEc-CCCcE-EEcCC--EEEEEcC-CCcCcCCccChhHHHHHHHHHH
Confidence 642 1 12567788888888765677777 77764 44443 5777777 5555569999999999999999
Q ss_pred HHcCCCCCHHHHHHHHHHHHHHH
Q psy14735 283 LCYFPQLPLGEIILRSCHVARQS 305 (340)
Q Consensus 283 l~~~~g~~~~~a~~~a~~~Aa~~ 305 (340)
+.+ |.+ .+|+..|...-+.+
T Consensus 205 lA~--g~~-~~Aa~~a~~~~~~A 224 (265)
T 1v8a_A 205 VAV--TEP-LKATTSALVTFGIA 224 (265)
T ss_dssp HTT--SCH-HHHHHHHHHHHHHH
T ss_pred Hhc--CCC-HHHHHHHHHHHHHH
Confidence 999 999 88887776554433
No 63
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=99.08 E-value=4.9e-10 Score=100.14 Aligned_cols=147 Identities=14% Similarity=0.058 Sum_probs=97.6
Q ss_pred ccCCcEEEEeCCC--CH---HHHHHHHHhchhcccCCceEEEeCCCCC-----CCCchhhhhcCcEEEeCHHHHHHhhcC
Q psy14735 143 LLKAKVIMFQGET--PW---ETTLYCLSKLHVSLESRAKIIVNPSPAV-----YPLNPIVMILADIICINEQEAEIITDM 212 (340)
Q Consensus 143 ~~~~~~v~i~~~~--~~---~~~~~~~~~a~~~~~~~~~v~~d~~~~~-----~~~~~~~l~~~dil~~n~~E~~~l~~~ 212 (340)
++.++++++..-+ .. +.+.++++.. + .+.|+++|+.... .+.+.. +..++++||..|++.|+|.
T Consensus 109 ~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~---~-~~~pvVlDa~g~~ll~~~~~~l~~--~~~~viTPN~~E~~~L~g~ 182 (310)
T 2r3b_A 109 VEQADVILIGPGLGLDATAQQILKMVLAQH---Q-KQQWLIIDGSAITLFSQGNFSLTY--PEKVVFTPHQMEWQRLSHL 182 (310)
T ss_dssp HHHCSEEEECTTCCSSHHHHHHHHHHHHHC---C-TTCEEEEETHHHHHHHHTTCCCSS--GGGEEEECCHHHHHHHHCC
T ss_pred hccCCEEEEeCCCCCCHHHHHHHHHHHHhc---C-CCCcEEEcCCcchhcccchhhhcC--CCCEEEcCCHHHHHHHhCC
Confidence 4578899997433 23 3344445444 4 5789999995321 011111 4678999999999999998
Q ss_pred CCCChh-hH-HHHHHHHHhcCCCEEEEEecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCC
Q psy14735 213 KINNEE-DL-ADCMEKLLDMKCNTVIITLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLP 290 (340)
Q Consensus 213 ~~~~~~-~~-~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~ 290 (340)
+..+.+ +. .++++++ ++ +|+..| .+.++++ ++ .. ++.. ......++.|+||+|.|.+...+.+ |.+
T Consensus 183 ~~~~~~~~~a~~aA~~l---g~--~VvlKG-~~~vi~~-~~-~~-~~~~-~g~~~~~t~GtGD~Lag~Iaa~lA~--g~~ 250 (310)
T 2r3b_A 183 PIEQQTLANNQRQQAKL---GS--TIVLKS-HRTTIFH-AG-EP-FQNT-GGNPGMATGGTGDTLAGIIAGFLAQ--FKP 250 (310)
T ss_dssp CGGGCCHHHHHHHHHHH---TS--EEEECS-TTCEEEC-SS-SC-EECC-CCCGGGCSTTHHHHHHHHHHHHHHH--SCS
T ss_pred CCCcccchHHHHHHHHh---Cc--EEEEeC-CceEEEE-CC-EE-EEEC-CCCCCCCCCChHHHHHHHHHHHHHc--CCC
Confidence 655433 44 6677776 43 445555 5666766 32 34 4445 5567789999999975555555568 999
Q ss_pred HHHHHHHHHHHHHHHhc
Q psy14735 291 LGEIILRSCHVARQSLF 307 (340)
Q Consensus 291 ~~~a~~~a~~~Aa~~~~ 307 (340)
+.+|+..|+++.+...+
T Consensus 251 ~~eA~~~A~~~~~~ag~ 267 (310)
T 2r3b_A 251 TIETIAGAVYLHSLIGD 267 (310)
T ss_dssp SHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999877766443
No 64
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=99.04 E-value=1.3e-09 Score=95.77 Aligned_cols=171 Identities=15% Similarity=0.081 Sum_probs=112.2
Q ss_pred ccCCcEEEEeCCCC-HHHHHHHHHhchhcccCCceEEEeCCCCCCCCchhhhhcCcEEEeCHHHHHHhhcCCCCCh-hhH
Q psy14735 143 LLKAKVIMFQGETP-WETTLYCLSKLHVSLESRAKIIVNPSPAVYPLNPIVMILADIICINEQEAEIITDMKINNE-EDL 220 (340)
Q Consensus 143 ~~~~~~v~i~~~~~-~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~~~~~~-~~~ 220 (340)
++++|++++..-.. .+...++++.+ .+.+.|+++|......+.+ ......++++||..|++.|+|....+. ++.
T Consensus 96 l~~~davviGPGlg~~~~~~~~~~~~---l~~~~p~VlDAdal~~~~l-~~~~~~~vlTPN~~E~~~L~g~~~~~~~~d~ 171 (279)
T 3rpz_A 96 EETYRAIAIGPGLPQTESVQQAVDHV---LTADCPVILDAGALAKRTY-PKREGPVILTPHPGEFFRMTGVPVNELQKKR 171 (279)
T ss_dssp SSCCSEEEECTTCCCCHHHHHHHHHH---TTSSSCEEECGGGCCSCCC-CCCSSCEEECCCHHHHHHHHCCCHHHHTTSH
T ss_pred ccCCCEEEECCCCCCCHHHHHHHHHH---HhhCCCEEEECCccchhhh-hhccCCEEEecCHHHHHHHhCCCccchHHHH
Confidence 57889999975443 34556777777 6678899999876542111 112457899999999999999764332 456
Q ss_pred HHHHHHHHhcCCCEEEEEecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHH
Q psy14735 221 ADCMEKLLDMKCNTVIITLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEIILRSCH 300 (340)
Q Consensus 221 ~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~ 300 (340)
.++++.+.++.-.. |+-.|. +.++++.+ ..+++.. .......+.|+||++.+.+...+.+ |.++.+|+..|.+
T Consensus 172 ~~aa~~la~~~~~~-VvlKG~-~~vi~~~~--g~~~~~~-~g~~~~at~GtGD~Lag~iaa~lA~--g~~~~~A~~~a~~ 244 (279)
T 3rpz_A 172 AEYAKEWAAQLQTV-IVLKGN-QTVIAFPD--GDCWLNP-TGNGALAKGGTGDTLTGMILGMLCC--HEDPKHAVLNAVY 244 (279)
T ss_dssp HHHHHHHHHHHTSE-EEECST-TCEEECTT--SCEEECC-CCCGGGCSTTHHHHHHHHHHHHHHH--CSSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCeE-EEEeCC-CcEEECCC--ceEEEeC-CCCCCCCCCChHHHHHHHHHHHHHC--CCCHHHHHHHHHH
Confidence 67788887643234 444443 45666654 2445555 4556778999999877666666779 9999999998875
Q ss_pred ----HHHHHhcccCCCCCCCCccCcchhhh
Q psy14735 301 ----VARQSLFNVGLQNSFPDKETLPDNLF 326 (340)
Q Consensus 301 ----~Aa~~~~~~g~~~~~~~~~~v~~~l~ 326 (340)
++-...+..|... ....++-+.|.
T Consensus 245 lh~~Ag~~a~~~~g~~~--~~a~dl~~~lp 272 (279)
T 3rpz_A 245 LHGACAELWTDEHSAHT--LLAHELSDILP 272 (279)
T ss_dssp HHHHHHHHHHHHSCTTS--CCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCC--cCHHHHHHHHH
Confidence 3333444444332 24455555554
No 65
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=99.00 E-value=7.1e-10 Score=99.14 Aligned_cols=151 Identities=11% Similarity=0.058 Sum_probs=98.3
Q ss_pred ccCCcEEEEeCCC--CH---HHHHHHHHhchhcccCCceEEEeCCCCCC-CCchhh-h-hcCcEEEeCHHHHHHhhcCCC
Q psy14735 143 LLKAKVIMFQGET--PW---ETTLYCLSKLHVSLESRAKIIVNPSPAVY-PLNPIV-M-ILADIICINEQEAEIITDMKI 214 (340)
Q Consensus 143 ~~~~~~v~i~~~~--~~---~~~~~~~~~a~~~~~~~~~v~~d~~~~~~-~~~~~~-l-~~~dil~~n~~E~~~l~~~~~ 214 (340)
++.++++++..-+ .. +.+.++++.. + .+.|+++|+..... .....+ + +..+++++|..|++.|+|.+.
T Consensus 123 ~~~~dav~IG~Gl~~~~~~~~~v~~~l~~~---~-~~~pvVlDa~g~~ll~~~~~l~L~~~~~viTPN~~E~~~L~g~~~ 198 (311)
T 3bgk_A 123 ITAADVVLMGPGLAEDDLAQTTFDVVWQAI---E-PKQTLIIDGSAINLLAKRKPAIWPTKQIILTPHQKEWERLSGLTI 198 (311)
T ss_dssp HHHCSEEEECTTCCSSHHHHHHHHHHHHHC---C-TTSEEEEETHHHHHHHHCC-CCCSCSCEEEECCSCC-CTTTCCCS
T ss_pred hccCCEEEEcCCCCCCHHHHHHHHHHHHHc---C-CCCeEEEeCChhhhhccChhhcCCCCCEEECCcHHHHHHHhCCCC
Confidence 4578899997423 23 3344445444 4 57899999964310 000011 2 468899999999999999876
Q ss_pred CCh-hhH-HHHHHHHHhcCCCEEEEEecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHH-cCCCCCH
Q psy14735 215 NNE-EDL-ADCMEKLLDMKCNTVIITLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLC-YFPQLPL 291 (340)
Q Consensus 215 ~~~-~~~-~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~-~~~g~~~ 291 (340)
.+. ++. .++++.|.+ + .+|+..| .+.++++ + ..+++.. +.....++.|+||+| +|++++++ +. |.++
T Consensus 199 ~~~~~d~~~~aa~~l~~-g--~~VvlkG-~~~~i~~-~--~~~~~~~-~~~~~~~t~GtGD~L-ag~iaa~lA~~-g~~~ 268 (311)
T 3bgk_A 199 PEQIEAATQTALAHFPK-E--TILVAKS-HQTKIYQ-G--QKIGHIQ-VGGPYQATGGMGDTL-AGMIAGFVAQF-HTDR 268 (311)
T ss_dssp TTCCHHHHHHHHTTSCT-T--CEEEECS-SSCEEEE-T--TEEEEEC-CCCGGGCSTTHHHHH-HHHHHHHHHHC-CSCH
T ss_pred CcchhhHHHHHHHHHhc-C--CEEEEeC-CCeEEEE-C--CEEEEEC-CCCCCCCCCcHHHHH-HHHHHHHHHcc-CCCH
Confidence 554 456 677777776 4 3444445 5667776 4 3345555 567778999999997 66666665 31 4799
Q ss_pred HHHHHHHHHHHHHHhc
Q psy14735 292 GEIILRSCHVARQSLF 307 (340)
Q Consensus 292 ~~a~~~a~~~Aa~~~~ 307 (340)
.+|+..|+++.+.+.+
T Consensus 269 ~eA~~~A~~~~~~ag~ 284 (311)
T 3bgk_A 269 FEVAAAAVFLHSYIAD 284 (311)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999877766443
No 66
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=98.97 E-value=4.8e-09 Score=99.56 Aligned_cols=181 Identities=10% Similarity=0.075 Sum_probs=117.4
Q ss_pred CCHHHHHHHHhhccCCcEEEEeCCCC-HHHHHHHHH-hchhcccCCceEEEeCCCCCCCCchhhhh---cCcEEEeCHHH
Q psy14735 131 LSASDIDAAKNLLLKAKVIMFQGETP-WETTLYCLS-KLHVSLESRAKIIVNPSPAVYPLNPIVMI---LADIICINEQE 205 (340)
Q Consensus 131 ~~~~~i~~~~~~~~~~~~v~i~~~~~-~~~~~~~~~-~a~~~~~~~~~v~~d~~~~~~~~~~~~l~---~~dil~~n~~E 205 (340)
+++++++.+.+.++.++++++..-+. .+...++++ .+ ++.+.|+++|+..... ...++++ ..+++++|..|
T Consensus 306 ~~~~~~~~~~~~~~~~davviGpGlg~~~~~~~~~~~~l---~~~~~pvVlDadgl~~-l~~~ll~~~~~~~vlTPN~~E 381 (502)
T 3rss_A 306 FSLQNLQECLELSKDVDVVAIGPGLGNNEHVREFVNEFL---KTLEKPAVIDADAINV-LDTSVLKERKSPAVLTPHPGE 381 (502)
T ss_dssp CCGGGHHHHHHHHTTCSEEEECTTCCCSHHHHHHHHHHH---HHCCSCEEECHHHHHT-CCHHHHHHCSSCEEECCCHHH
T ss_pred cchhhHHHHHHHhccCCEEEEeCCCCCCHHHHHHHHHHH---HhcCCCEEEeCcccch-hcHHHHhccCCCEEEeCCHHH
Confidence 45555665555678999999975433 233344443 45 5668999999875321 1134443 57899999999
Q ss_pred HHHhhcCCCCCh-hhHHHHHHHHHhcCCCEEEEEecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHH
Q psy14735 206 AEIITDMKINNE-EDLADCMEKLLDMKCNTVIITLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLC 284 (340)
Q Consensus 206 ~~~l~~~~~~~~-~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~ 284 (340)
+..|+|.+..+. ++ .++++.+.+++- .+|+..|. +.++++.+ +.+. .. ......+++|+||+|.|.+...+.
T Consensus 382 ~~~L~g~~~~~~~~d-~~aa~~la~~~~-~~VvlKG~-~~vi~~~~--~~~~-~~-~g~~~~at~GsGD~Lag~iaa~lA 454 (502)
T 3rss_A 382 MARLVKKTVGDVKYN-YELAEEFAKEND-CVLVLKSA-TTIVTDGE--KTLF-NI-TGNTGLSKGGSGDVLTGMIAGFIA 454 (502)
T ss_dssp HHHHHTCCHHHHTTC-HHHHHHHHHHHT-SEEEECSS-SEEEECSS--CEEE-EC-CCCGGGSSTTHHHHHHHHHHHHHH
T ss_pred HHHHhCCCccchHHH-HHHHHHHHHHcC-CEEEEeCC-CeEEEcCC--EEEE-EC-CCCCccccCCchHHHHHHHHHHHh
Confidence 999999754321 34 677777776532 25555554 45566554 4444 33 345677899999998888888888
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhccc--CCCCCCCCccCcchhhh
Q psy14735 285 YFPQLPLGEIILRSCHVARQSLFNV--GLQNSFPDKETLPDNLF 326 (340)
Q Consensus 285 ~~~g~~~~~a~~~a~~~Aa~~~~~~--g~~~~~~~~~~v~~~l~ 326 (340)
+ +.++.+|+..|+...+.+-+.. |.. + ....++-+.|.
T Consensus 455 ~--g~~~~~Aa~~A~~~hg~Ag~~aa~g~~-~-~~a~dl~~~lp 494 (502)
T 3rss_A 455 Q--GLSPLEASTVSVYLHGFAAELFEQDER-G-LTASELLRLIP 494 (502)
T ss_dssp T--TCCHHHHHHHHHHHHHHHHHTCSSCGG-G-CCHHHHHHHHH
T ss_pred C--CCCHHHHHHHHHHHHHHHHHHHhcCCC-C-cCHHHHHHHHH
Confidence 9 9999999999987776654332 322 1 24455555543
No 67
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=98.94 E-value=3.5e-08 Score=86.16 Aligned_cols=156 Identities=11% Similarity=0.044 Sum_probs=108.3
Q ss_pred HHHHHHHHhhccCCcEEEEe-CCCCHH---HHHHHHHhchhcccCCceEEEeCCCCCCC-----Cchhhh-hcCcEEEeC
Q psy14735 133 ASDIDAAKNLLLKAKVIMFQ-GETPWE---TTLYCLSKLHVSLESRAKIIVNPSPAVYP-----LNPIVM-ILADIICIN 202 (340)
Q Consensus 133 ~~~i~~~~~~~~~~~~v~i~-~~~~~~---~~~~~~~~a~~~~~~~~~v~~d~~~~~~~-----~~~~~l-~~~dil~~n 202 (340)
++++.. ..+.++.+++. |....+ .....++.+ ++.+.|+++||...... ....++ ..++++++|
T Consensus 49 ~~e~~e---~~~~a~alvIn~G~l~~~~~~~~~~a~~~a---~~~~~PvVlDPVg~gas~~r~~~~~~Ll~~~~~VItpN 122 (273)
T 3dzv_A 49 PREFPQ---MFQQTSALVLNLGHLSQEREQSLLAASDYA---RQVNKLTVVDLVGYGASDIRNEVGEKLVHNQPTVVKGN 122 (273)
T ss_dssp GGGHHH---HHTTCSEEEEECCSCCHHHHHHHHHHHHHH---HHTTCCEEEECTTTTSCHHHHHHHHHHHHTCCSEEEEE
T ss_pred HHHHHH---HHHHCCeEEEecCCCChHHHHHHHHHHHHH---HHcCCcEEEchhhcCCcccCHHHHHHHHhcCCcEECCC
Confidence 444443 36788999996 344443 455566667 78899999999754210 111222 368999999
Q ss_pred HHHHHHhhcCCCC-----C------hh---hHHHHHHHHHhcCC-CEEEEEecCCceEEEecCCCceEEEccCCCcCccc
Q psy14735 203 EQEAEIITDMKIN-----N------EE---DLADCMEKLLDMKC-NTVIITLGGSGVVYATRDNPRLKTITVDHVEYPIE 267 (340)
Q Consensus 203 ~~E~~~l~~~~~~-----~------~~---~~~~~~~~l~~~g~-~~vvvt~G~~G~~~~~~~~~~~~~~p~~~~~~vvd 267 (340)
..|+..|+|.... + .+ +..++++.+.++.. ..|++|-+. -++++.+ +.+.++. .....-+
T Consensus 123 ~~E~~~L~g~~~~~~GVds~~~~~~~~~~~d~~~aa~~la~~~~~~~VvlkG~~--D~i~dg~--~~~~~~~-G~~~~~~ 197 (273)
T 3dzv_A 123 LSEMRTFCQLVSHGRGVDGSPLDQSEEAIEELIQALRQQTQKFPQTVFLATGIQ--DVLVSQE--QVIVLQN-GVPELDC 197 (273)
T ss_dssp HHHHHHHTTCCCC-------CGGGSHHHHHHHHHHHHHHHHHSTTCEEEEESSS--EEEECSS--CEEEECC-CCGGGGS
T ss_pred HHHHHHHhCCcccccccccccccchhhhhHHHHHHHHHHHHHhCCeEEEEECCe--eEEEcCC--EEEEeCC-CCcccCC
Confidence 9999999997532 1 12 55677888887655 678887532 3455544 5667766 4444456
Q ss_pred CCCcchHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Q psy14735 268 SEGVGDCFVGALAYYLCYFPQLPLGEIILRSCHV 301 (340)
Q Consensus 268 ttGaGDaF~ag~~~~l~~~~g~~~~~a~~~a~~~ 301 (340)
++|+||.+.|.+.+.+.+ +.++.+|+..|...
T Consensus 198 v~GtGc~Ls~~Iaa~lA~--g~~~~~Aa~~A~~~ 229 (273)
T 3dzv_A 198 FTGTGDLVGALVAALLGE--GNAPMTAAVAAVSY 229 (273)
T ss_dssp STTHHHHHHHHHHHHHHH--TCCHHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHHHhC--CCCHHHHHHHHHHH
Confidence 799999999999999999 99999998877655
No 68
>3drw_A ADP-specific phosphofructokinase; AMP, GLYC kinase, magnesium, metal-binding, transferase, structural G PSI-2, protein structure initiative; HET: AMP; 1.90A {Pyrococcus horikoshii} PDB: 1u2x_A
Probab=98.54 E-value=4.2e-07 Score=84.53 Aligned_cols=228 Identities=16% Similarity=0.111 Sum_probs=134.8
Q ss_pred eeecCChHHHHHHHHHhcCC-ceeEEEEecCChhhHHHHHHHhhhcCCcc----------------------cceEeeCC
Q psy14735 47 EQRFSGKGANQCVAAAKLRA-SVALISKLGNDKFGKSYLEELRKYNSINT----------------------KYIWLLQD 103 (340)
Q Consensus 47 ~~~~GG~~~n~a~~l~~lG~-~v~~~~~vG~D~~g~~i~~~l~~~~gi~~----------------------~~v~~~~~ 103 (340)
+.+.||.+.-+|..|+.+|. +|.+.+..+... ..+.| . .+|-. +.++..-+
T Consensus 113 ~~~~GGnA~imAn~La~lg~~~Vi~~~p~~sk~----~~~ll-~-~~i~~p~~e~g~l~l~~~~ea~~~~~~~~iH~I~E 186 (474)
T 3drw_A 113 EERLGGQAGIIANTLAGLKIRKVIAYTPFLPKR----LAELF-K-KGVLYPVVENGELQFKPIQEAYREGDPLKINRIFE 186 (474)
T ss_dssp EEEEESHHHHHHHHHHHTTCSEEEECCSCCCHH----HHTTS-C-TTEEEEEESSSSEEEEEGGGCCCTTCCCCEEEEEE
T ss_pred eEecCChHHHHHHHHHHcCCCcEEEecCcCCHH----HHHhc-C-CcceeecccCCceeecCchhhhccCCCCCcEEEEE
Confidence 56899999999999999999 577777766532 22333 2 22210 11111111
Q ss_pred CCCceEEE-----EEcCCCCeEEEEeCCcCC-CC--CHHHHHHHHhhccCCcEEEEeCCC--C---------HH---HHH
Q psy14735 104 VTTGVCSK-----VISNKGTHQTNIIPGANT-YL--SASDIDAAKNLLLKAKVIMFQGET--P---------WE---TTL 161 (340)
Q Consensus 104 ~~t~~~~i-----~~~~~g~~~~~~~~~~~~-~~--~~~~i~~~~~~~~~~~~v~i~~~~--~---------~~---~~~ 161 (340)
.+.|..+- +..+..+|-++..+..+. .+ .++..+.+.+..+.+|.++++|.- . .+ ...
T Consensus 187 y~~G~~~~~~~~~~~aPraNRfI~s~D~~N~~~l~~~e~f~~~l~e~~~~~d~~vLSGlq~m~~~y~dg~~~~~~l~~~~ 266 (474)
T 3drw_A 187 FRKGLKFKLGDETIEIPNSGRFIVSARFESISRIETREDIKPFLGEIGKEVDGAIFSGYQGLRTKYSDGKDANYYLRRAK 266 (474)
T ss_dssp ECTTCEEESSSCEEECCSCEEEEEEECCSGGGCCSCCTTTGGGHHHHHHHCSEEEECCGGGCCSBCTTSCBHHHHHHHHH
T ss_pred cCCCCeeecCCceEEccCCCeEEEEcCCCCHHhccccHHHHHHHHHhhcCCCEEEEeccccccccccccccHHHHHHHHH
Confidence 22222222 122334444444443344 33 233222222233468999998621 1 12 233
Q ss_pred HHHHhchhcccCCceEEEeCCCCCC-----CCchhhhhcCcEEEeCHHHHHHhhcC-----------CCCChhhHHHHHH
Q psy14735 162 YCLSKLHVSLESRAKIIVNPSPAVY-----PLNPIVMILADIICINEQEAEIITDM-----------KINNEEDLADCME 225 (340)
Q Consensus 162 ~~~~~a~~~~~~~~~v~~d~~~~~~-----~~~~~~l~~~dil~~n~~E~~~l~~~-----------~~~~~~~~~~~~~ 225 (340)
+.++.. +..+.++-+....... .....+++.+|.+-+|++|+..+.+. ..++.+++.++++
T Consensus 267 e~i~~l---~~~~~~iH~E~As~~~~~l~~~i~~~i~p~vDSlGmNEqELa~l~~~lg~~~~s~~~~~~~~i~~v~e~~~ 343 (474)
T 3drw_A 267 EDIIEF---KEKDVKIHVEFASVQDRKLRKKIITNILPFVDSVGIDEAEIAQILSVLGYRELADRIFTYNRLEDSILGGM 343 (474)
T ss_dssp HHHHHH---HHTTCEEEEECCCCSCHHHHHHHHHHTGGGSSEEEEEHHHHHHHHHHHTCHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHh---cCCCCeEEEEeCccccHHHHHHHHHHhcccccccccCHHHHHHHHHHhcCCccchhhhcCCCHHHHHHHHH
Confidence 555555 6778999998876543 24557889999999999999988764 1234567777888
Q ss_pred HHHh-cCCCEEEEEecCCceEEEecC------------------------------------------------------
Q psy14735 226 KLLD-MKCNTVIITLGGSGVVYATRD------------------------------------------------------ 250 (340)
Q Consensus 226 ~l~~-~g~~~vvvt~G~~G~~~~~~~------------------------------------------------------ 250 (340)
.|.+ .+++.+.|..-..-+++...+
T Consensus 344 ~ll~~~~l~rIhvHT~~y~l~~~~~~~~~~~~~~~~aL~~g~~~AaakA~~G~i~~~ed~~~~l~~p~s~~g~~~~~~~~ 423 (474)
T 3drw_A 344 IILDELNFEILQVHTTYYLMYITHRDNPLSEEELAKSLEFGTTLAAARASLGDIRGPDDYKVGLKVPFNERSEYVKLRFE 423 (474)
T ss_dssp HHHHHHCCSEEEEECSSEEEEEEETTCSSCHHHHHHHHHHHHHHHHHHHHHSSCCSGGGHHHHHTSCCCTTHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEechheEEEEecCCCCChHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCcchhHHHHHHHHH
Confidence 7776 477766665433333333211
Q ss_pred ---------CCceEEEccCCCc-CcccCCCcchHHHHH-HHHHHH
Q psy14735 251 ---------NPRLKTITVDHVE-YPIESEGVGDCFVGA-LAYYLC 284 (340)
Q Consensus 251 ---------~~~~~~~p~~~~~-~vvdttGaGDaF~ag-~~~~l~ 284 (340)
+.++..+|. .-+ +++.|+|-||+|.|| |+++|.
T Consensus 424 ~~~~~~~~~~~~v~~iPt-~~v~~P~~TVGLGDtiSagaF~~~l~ 467 (474)
T 3drw_A 424 EAKSRLRMREYKVVVIPT-RLVQNPVLTVGLGDTISAGAFLTYLE 467 (474)
T ss_dssp HHHHHSCCTTEEEEEEEC-CCCSSCSCCTTHHHHHHHHHHHHHHH
T ss_pred HhccccccCCceEEEEeh-hhhcCCCccccCCchhhHHHHHHHHH
Confidence 013456777 544 688999999999998 777764
No 69
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=98.41 E-value=1.3e-05 Score=76.75 Aligned_cols=154 Identities=13% Similarity=0.072 Sum_probs=103.6
Q ss_pred HhhccC-CcEEEEeCCC--CHHHHHHHHHhchhcccCCceEEEeCCCCCC-----CCchhhhh--cCcEEEeCHHHHHHh
Q psy14735 140 KNLLLK-AKVIMFQGET--PWETTLYCLSKLHVSLESRAKIIVNPSPAVY-----PLNPIVMI--LADIICINEQEAEII 209 (340)
Q Consensus 140 ~~~~~~-~~~v~i~~~~--~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~-----~~~~~~l~--~~dil~~n~~E~~~l 209 (340)
.+..+. ++.+++..-+ +.+....+++.+ ++.+.|+++||..... +....+++ ..+++++|..|+..|
T Consensus 300 ~e~~~~~~~alvin~G~l~~~~~~~~a~~~a---~~~~~PvVlDPVg~~a~~~r~~~~~~Ll~~~~~~vItpN~~E~~~L 376 (540)
T 3nl6_A 300 NDLAAIPHATLLLNTGSVAPPEMLKAAIRAY---NDVKRPIVFDPVGYSATETRLLLNNKLLTFGQFSCIKGNSSEILGL 376 (540)
T ss_dssp HHHTTSTTCEEEEESSCSCCHHHHHHHHHHH---HTTTCCEEEECTTCTTSHHHHHHHHHHTTSCCCSEEEECHHHHHHH
T ss_pred HHHHhccCCeEEEeCCCCCHHHHHHHHHHHH---HHcCCCEEEChHHhhcccccHHHHHHHHhhCCCeEECCCHHHHHHH
Confidence 345676 8999996322 267777888888 8899999999976431 11234555 689999999999999
Q ss_pred hcCCC------C-----ChhhHHHHHHHHHhcCCCEEEEEecCCceEEEec-----------------CCCceEEEccCC
Q psy14735 210 TDMKI------N-----NEEDLADCMEKLLDMKCNTVIITLGGSGVVYATR-----------------DNPRLKTITVDH 261 (340)
Q Consensus 210 ~~~~~------~-----~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~-----------------~~~~~~~~p~~~ 261 (340)
+|... + +.++..++++.+.++.-..|++| |+. -++.+. ++.+.+.++. -
T Consensus 377 ~g~~~~~~~GVds~~~~~~~d~~~aA~~lA~~~~~vVvlk-G~~-D~I~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~-G 453 (540)
T 3nl6_A 377 AELNKERMKGVDASSGISNELLIQATKIVAFKYKTVAVCT-GEF-DFIADGTIEGKYSLSKGTNGTSVEDIPCVAVEA-G 453 (540)
T ss_dssp TTC--------------CCHHHHHHHHHHHHHTTSEEEEC-SSS-EEEEECCGGGBCCSSSCCSSCCTTSSCEEEEEC-S
T ss_pred hCCCcccccccccccccCHHHHHHHHHHHHHHhCCEEEEc-CCC-eEEECCCccccccccccccccccCCccEEEECC-C
Confidence 98653 1 12566778888887654566665 443 344444 0014666655 3
Q ss_pred C-cCcccCCCcchHHHHHHHHHHHcCCCC---CHHHHHHHHHHH
Q psy14735 262 V-EYPIESEGVGDCFVGALAYYLCYFPQL---PLGEIILRSCHV 301 (340)
Q Consensus 262 ~-~~vvdttGaGDaF~ag~~~~l~~~~g~---~~~~a~~~a~~~ 301 (340)
. .-.-.++|.||++.+.+...+.. +. ++.+|+..|...
T Consensus 454 ~~~~m~~vtGtGc~Lsg~Iaa~la~--~~~~~~~~~Aa~~a~~~ 495 (540)
T 3nl6_A 454 PIEIMGDITASGCSLGSTIACMIGG--QPSEGNLFHAVVAGVML 495 (540)
T ss_dssp CCGGGGSSTTHHHHHHHHHHHHHHT--CCTTCBHHHHHHHHHHH
T ss_pred ChhhccCccCchHHHHHHHHHHHhc--CcCCCCHHHHHHHHHHH
Confidence 3 22234699999999999988888 87 588887666554
No 70
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=98.29 E-value=1.3e-05 Score=69.45 Aligned_cols=147 Identities=13% Similarity=-0.001 Sum_probs=92.4
Q ss_pred ccCCcEEEEe-CCCCHHHH---HHHHHhchhcccCCceEEEeCCCCCC-----CCchh-hhhcCcEEEeCHHHHHHhhcC
Q psy14735 143 LLKAKVIMFQ-GETPWETT---LYCLSKLHVSLESRAKIIVNPSPAVY-----PLNPI-VMILADIICINEQEAEIITDM 212 (340)
Q Consensus 143 ~~~~~~v~i~-~~~~~~~~---~~~~~~a~~~~~~~~~v~~d~~~~~~-----~~~~~-~l~~~dil~~n~~E~~~l~~~ 212 (340)
.+.++.+++. |....+.. ....+.+ ++.+.|+++||..... +.... +..+.+++++|..|...|.|.
T Consensus 54 ~~~a~al~iNiGtl~~~~~~~m~~A~~~A---~~~~~PvVLDPVg~gas~~R~~~~~~ll~~~~~vIrgN~sEi~~L~g~ 130 (265)
T 3hpd_A 54 IRLADAVVINIGTLDSGWRRSMVKATEIA---NELGKPIVLDPVGAGATKFRTRVSLEILSRGVDVLKGNFGEISALLGE 130 (265)
T ss_dssp HHHCSEEEEECTTCCHHHHHHHHHHHHHH---HHHTCCEEEECTTBTTBHHHHHHHHHHHHHCCSEEEEEHHHHHHHHHH
T ss_pred HHHCCeEEEECCCCChHHHHHHHHHHHHH---HHcCCCEEEcCCCCCCcHHHHHHHHHHHhcCCcEEcCCHHHHHHHhcc
Confidence 4557788886 44454444 4445666 8889999999975431 11122 235689999999999999874
Q ss_pred CC---------CChhhHHHHHHHHHhcCCCEEEEEecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHH
Q psy14735 213 KI---------NNEEDLADCMEKLLDMKCNTVIITLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYL 283 (340)
Q Consensus 213 ~~---------~~~~~~~~~~~~l~~~g~~~vvvt~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l 283 (340)
.. .+.++..++++.+.++.-..|++| |+ .-++.+.+ +.+.++. -..-.-..+|.||.+.+.+...+
T Consensus 131 ~~~~~gvds~~~~~~d~~~~a~~lA~~~~~vVvlk-G~-~d~I~dg~--~~~~~~~-G~~~m~~vtGtGc~Lsg~iaa~l 205 (265)
T 3hpd_A 131 EGKTRGVDSLEYGEEEAKKLTMNAAREFNTTVAVT-GA-VDYVSDGR--RTFAVYN-GHELLGRVTGTGCMVAALTGAFV 205 (265)
T ss_dssp HC----------CHHHHHHHHHHHHHHTTSEEEEE-SS-SEEEECSS--CEEEECC-CCGGGGGSTTHHHHHHHHHHHHH
T ss_pred cCCCCCccCccccHHHHHHHHHHHHHHhCCEEEEe-CC-CeEEEcCC--EEEEECC-CChHhhcCCccchHHHHHHHHHH
Confidence 31 134567777888876543466665 44 34455444 5666655 32223344899999877777666
Q ss_pred HcCCCCCHHHHHHHHHH
Q psy14735 284 CYFPQLPLGEIILRSCH 300 (340)
Q Consensus 284 ~~~~g~~~~~a~~~a~~ 300 (340)
.. + ++.+|...|..
T Consensus 206 A~--~-~~~~Aa~~a~~ 219 (265)
T 3hpd_A 206 AV--T-EPLKATTSALV 219 (265)
T ss_dssp TT--S-CHHHHHHHHHH
T ss_pred hc--C-ChHHHHHHHHH
Confidence 77 6 55566555543
No 71
>1ua4_A Glucokinase, ADP-dependent glucokinase; transferase; HET: GLC BGC AMP; 1.90A {Pyrococcus furiosus} SCOP: c.72.1.3
Probab=98.11 E-value=2e-05 Score=73.41 Aligned_cols=182 Identities=13% Similarity=0.056 Sum_probs=102.5
Q ss_pred ecCChHHHHHHHHHhcCCceeE--EEEecCChhhHHHHHHHhhhcCCcccceEe-------------eCCCCCceEEEEE
Q psy14735 49 RFSGKGANQCVAAAKLRASVAL--ISKLGNDKFGKSYLEELRKYNSINTKYIWL-------------LQDVTTGVCSKVI 113 (340)
Q Consensus 49 ~~GG~~~n~a~~l~~lG~~v~~--~~~vG~D~~g~~i~~~l~~~~gi~~~~v~~-------------~~~~~t~~~~i~~ 113 (340)
+.||.+..+|..|+.+|.++.+ ++.+|+ ...+.|.. .+|.. -.. ....+...-+|+-
T Consensus 109 ~~GGnA~imAn~la~lg~~~vl~~~~~l~~-----~~~~lf~~-~~i~~--p~~~~~~~~l~~~~e~~~~~~~~iH~I~E 180 (455)
T 1ua4_A 109 RMGGQAGIMANLLGGVYGVPVIVHVPQLSR-----LQANLFLD-GPIYV--PTLENGEVKLIHPKEFSGDEENCIHYIYE 180 (455)
T ss_dssp EEESHHHHHHHHHTTTTCCCEEECCSCCCH-----HHHTTSCS-SSEEE--EEEETTEEEEECGGGCSCCCCCCEEEEEE
T ss_pred ccCCcHHHHHHHHHHcCCCEEEEeCCCCCH-----HHHHhcCC-CCeEe--ecccCCccccccchhhccCCCCCceEEEE
Confidence 8999999999999999999987 777665 23444432 12221 000 0022333334443
Q ss_pred cCCCC-----------eEEEEeCCcCCC--CCHHHHHHHHhhccCCcEEEEeCCC--C----HHHHHHHHHhchhcccCC
Q psy14735 114 SNKGT-----------HQTNIIPGANTY--LSASDIDAAKNLLLKAKVIMFQGET--P----WETTLYCLSKLHVSLESR 174 (340)
Q Consensus 114 ~~~g~-----------~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~v~i~~~~--~----~~~~~~~~~~a~~~~~~~ 174 (340)
.+.|+ |-++..+..+.. ..++..+.+.+....+|.++++|.- . .+.....++.++.....+
T Consensus 181 f~~G~~~~~~~aPraNRfI~s~D~~n~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~~~~~~~~~~l~~i~~L~~~~ 260 (455)
T 1ua4_A 181 FPRGFRVFEFEAPRENRFIGSADDYNTTLFIREEFRESFSEVIKNVQLAILSGLQALTKENYKEPFEIVKSNLEVLNERE 260 (455)
T ss_dssp ECTTCEETTEECSSCEEEEEECCSSGGGTCCCGGGSTTHHHHGGGCSEEEECCGGGCCTTTCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCeecceeccccceeEEecCCCcccCcccHHHHHHHHhhccCCcEEEEechhcccccchHHHHHHHHHHHHHhcCCC
Confidence 34443 222222222222 2333223333334569999998731 1 233333333221114567
Q ss_pred ceEEEeCCCCCC-----CCchhhhhcCcEEEeCHHHHHHhhcCC-----------C--CChhhHHHHHHHHHh-cCCCEE
Q psy14735 175 AKIIVNPSPAVY-----PLNPIVMILADIICINEQEAEIITDMK-----------I--NNEEDLADCMEKLLD-MKCNTV 235 (340)
Q Consensus 175 ~~v~~d~~~~~~-----~~~~~~l~~~dil~~n~~E~~~l~~~~-----------~--~~~~~~~~~~~~l~~-~g~~~v 235 (340)
.++-++...... ... .+++++|.+-+|++|+..+.+.- . .+..+..+++.++++ .+++.+
T Consensus 261 ~~iH~ElAs~~~~~~~~~i~-~ilp~vDSlGmNE~EL~~l~~~lg~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~l~ri 339 (455)
T 1ua4_A 261 IPVHLEFAFTPDEKVREEIL-NVLGMFYSVGLNEVELASIMEILGEKKLAKELLAHDPVDPIAVTEAMLKLAKKTGVKRI 339 (455)
T ss_dssp CCEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHTTSSSSCCHHHHHHHHHHHHHHHCCSEE
T ss_pred ceEEEEeCCccCHHHHHHHH-hhhccCcccccCHHHHHHHHHHhCCCccccccccCCccCHHHHHHHHHHHHHHcCCCEE
Confidence 889998876542 244 78999999999999998775531 1 125566677777765 477665
Q ss_pred EEEe
Q psy14735 236 IITL 239 (340)
Q Consensus 236 vvt~ 239 (340)
.|..
T Consensus 340 hvHT 343 (455)
T 1ua4_A 340 HFHT 343 (455)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 5554
No 72
>1l2l_A ADP-dependent glucokinase; ADP glucokinase APO, transferase; 2.00A {Pyrococcus horikoshii} SCOP: c.72.1.3
Probab=98.00 E-value=0.00019 Score=66.75 Aligned_cols=181 Identities=9% Similarity=0.055 Sum_probs=101.5
Q ss_pred ecCChHHHHHHHHHhcCCceeE--EEEecCChhhHHHHHHHhhhcCCcc---------------------cceEeeCCCC
Q psy14735 49 RFSGKGANQCVAAAKLRASVAL--ISKLGNDKFGKSYLEELRKYNSINT---------------------KYIWLLQDVT 105 (340)
Q Consensus 49 ~~GG~~~n~a~~l~~lG~~v~~--~~~vG~D~~g~~i~~~l~~~~gi~~---------------------~~v~~~~~~~ 105 (340)
+.||.+.-+|..|+.+|.++.+ ++.+|+ ...+.|.. .+|.. +.++..-+.+
T Consensus 112 ~mGGnA~imAn~la~lg~~~vl~~~~~~s~-----~~~~l~~~-~~i~~p~~~~g~l~l~~~~e~~~~~~~~iH~I~Ey~ 185 (457)
T 1l2l_A 112 RMGGQVGIMANLLGGVYGIPVIAHVPQLSE-----LQASLFLD-GPIYVPTFERGELRLIHPREFRKGEEDCIHYIYEFP 185 (457)
T ss_dssp EEESHHHHHHHHHTTTSCCCEEECCSSCCH-----HHHHTSCS-SSEEEEC------CEECGGGC----CCCEEECCEEC
T ss_pred ccCchHHHHHHHHHHcCCCEEEEcCCCCCH-----HHHHhcCC-CCeEeeeccCCceeccCchhhccCCCCcceEEEEcC
Confidence 8999999999999999999877 555554 34444442 12210 0011110111
Q ss_pred CceEEE-EEcCCCCeEEEEeCCcCC--CCCHHHHHHHHhhccCCcEEEEeCCC--C----HH---HHHHHHHhchhcccC
Q psy14735 106 TGVCSK-VISNKGTHQTNIIPGANT--YLSASDIDAAKNLLLKAKVIMFQGET--P----WE---TTLYCLSKLHVSLES 173 (340)
Q Consensus 106 t~~~~i-~~~~~g~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~v~i~~~~--~----~~---~~~~~~~~a~~~~~~ 173 (340)
.|..+- +..+..+|-++..+..+. .+.++..+.+.+...++|.++++|.- . .+ ...+.++.. ...
T Consensus 186 ~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~d~~vlSG~q~l~~~~~~~~~~~~~~~i~~L---~~~ 262 (457)
T 1l2l_A 186 RNFKVLDFEAPRENRFIGAADDYNPILYVREEWIERFEEIAKRSELAIISGLHPLTQENHGKPIKLVREHLKIL---NDL 262 (457)
T ss_dssp TTCEETTEECSSCEEEEEEECSSGGGTCCCHHHHHSHHHHHTTCSEEEEECCTTCCTTTCHHHHHHHHHHHHHH---HHT
T ss_pred CCCeecceecCCCCeEEEEcCCCCCCCcccHHHHHHHHhhccCCCEEEEeccccccccchhhhHHHHHHHHHHh---cCC
Confidence 111111 122344444444443333 33444334343445679999999842 1 22 123333344 557
Q ss_pred CceEEEeCCCCCC-----CCchhhhhcCcEEEeCHHHHHHhhcCC-----------C--CChhhHHHHHHHHHh-cCCCE
Q psy14735 174 RAKIIVNPSPAVY-----PLNPIVMILADIICINEQEAEIITDMK-----------I--NNEEDLADCMEKLLD-MKCNT 234 (340)
Q Consensus 174 ~~~v~~d~~~~~~-----~~~~~~l~~~dil~~n~~E~~~l~~~~-----------~--~~~~~~~~~~~~l~~-~g~~~ 234 (340)
+.++-+....... ... .+++++|.+-+|++|+..++... . .+..+..+++.+|++ .+.+.
T Consensus 263 ~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~lg~~~l~~~i~~~~~~~v~~v~~~~~~ll~~~~l~r 341 (457)
T 1l2l_A 263 GIRAHLEFAFTPDEVVRLEIV-KLLKHFYSVGLNEVELASVVSVMGEKELAERIISKDPADPIAVIEGLLKLIKETGVKR 341 (457)
T ss_dssp TCEEEEECCCCSSHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSE
T ss_pred CCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHHcCCcccccccccCCccCHHHHHHHHHHHHHhcCCCe
Confidence 8889898776542 345 78999999999999998753221 0 124556666677775 47765
Q ss_pred EEEEe
Q psy14735 235 VIITL 239 (340)
Q Consensus 235 vvvt~ 239 (340)
+.+..
T Consensus 342 IhvHT 346 (457)
T 1l2l_A 342 IHFHT 346 (457)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 44443
No 73
>1gc5_A ADP-dependent glucokinase; ALFA/beta sandwichs, induced-fitting, transferase; HET: ADP; 2.30A {Thermococcus litoralis} SCOP: c.72.1.3
Probab=97.98 E-value=0.00016 Score=67.26 Aligned_cols=183 Identities=10% Similarity=0.026 Sum_probs=98.7
Q ss_pred ecCChHHHHHHHHHhcCCceeE--EEEecCChhhHHHHHHHhhhcCCccc-----ceEee------CCCCCceEEEEEc-
Q psy14735 49 RFSGKGANQCVAAAKLRASVAL--ISKLGNDKFGKSYLEELRKYNSINTK-----YIWLL------QDVTTGVCSKVIS- 114 (340)
Q Consensus 49 ~~GG~~~n~a~~l~~lG~~v~~--~~~vG~D~~g~~i~~~l~~~~gi~~~-----~v~~~------~~~~t~~~~i~~~- 114 (340)
+.||.+.-+|..|+.+|.++.+ ++.+|+ ...+.|.. .+|..- ..... .+.+.-.-+|+-.
T Consensus 117 ~mGGnAgimAn~la~lg~~~vl~~~~~~s~-----~~~~l~~~-~~i~~p~~~~g~l~~~~~~ea~~~~~~~iH~I~Ey~ 190 (467)
T 1gc5_A 117 RIGGQAGIMANLLGGVYRIPTIVHVPQNPK-----LQAELFVD-GPIYVPVFEGNKLKLVHPKDAIAEEEELIHYIYEFP 190 (467)
T ss_dssp EEESHHHHHHHHHHHTSCCCEEECCSCCCH-----HHHTTSCS-SSEEEEEECSSCEEEECGGGSCCSCCCCEEEEEEEC
T ss_pred ccCccHHHHHHHHHhcCCCEEEEcCCCCCH-----HHHHhcCC-CCeeeeeccCCceecccchhhccCCCCcceEEEEcC
Confidence 9999999999999999999877 555554 34444442 222110 00000 0011222222222
Q ss_pred ----------CCCCeEEEEeCCcCCC--CCHHHHHHHHhhccCCcEEEEeCCC-----------CHHHHHHHHHhchhcc
Q psy14735 115 ----------NKGTHQTNIIPGANTY--LSASDIDAAKNLLLKAKVIMFQGET-----------PWETTLYCLSKLHVSL 171 (340)
Q Consensus 115 ----------~~g~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~v~i~~~~-----------~~~~~~~~~~~a~~~~ 171 (340)
+..+|-++.++..+.. +.++..+.+.+....+|.++++|.- ..+.+.++.+.+++..
T Consensus 191 ~G~~~~~~~aPraNRfI~s~D~~N~~l~~~e~f~~~l~e~~~~~dl~vlSG~q~l~~~y~~g~~~~~~l~~~~~~l~~l~ 270 (467)
T 1gc5_A 191 RGFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILN 270 (467)
T ss_dssp SSCEETTEECSSCEEEEEECCSSTTTTCCCHHHHHSHHHHHTTCSEEEECCGGGCCSBCTTSCBHHHHHHHHHHHHHHHH
T ss_pred CCCeecceeccCCceEEEecCCCCccccccHHHHHHHHhhccCCCEEEEechhcccCccCCchhHHHHHHHHHHHHHhhc
Confidence 3334444433333333 3343333333445679999998631 1122222222221103
Q ss_pred cCCceEEEeCCCCCC-----CCchhhhhcCcEEEeCHHHHHHhhcC---C-------CCChhhHHHHHHHHHh-cCCCEE
Q psy14735 172 ESRAKIIVNPSPAVY-----PLNPIVMILADIICINEQEAEIITDM---K-------INNEEDLADCMEKLLD-MKCNTV 235 (340)
Q Consensus 172 ~~~~~v~~d~~~~~~-----~~~~~~l~~~dil~~n~~E~~~l~~~---~-------~~~~~~~~~~~~~l~~-~g~~~v 235 (340)
..+.++-+....... ... .+++++|.+-+|++|+..+... + .++..+..+++.++++ .+.+.+
T Consensus 271 ~~~~~iH~E~As~~~~~l~~~i~-~ilp~vDSlGmNEqELa~l~~~lg~~~l~~~i~~p~v~~v~~~~~~ll~~~~l~rI 349 (467)
T 1gc5_A 271 RYNVKSHFEFAYTANRRVREALV-ELLPKFTSVGLNEVELASIMEIIGDEELAKEVLEGHIFSVIDAMNVLMDETGIERI 349 (467)
T ss_dssp HTTCEEEEECCCCCCHHHHHHHH-HHGGGCSEEEECHHHHHHHHHHTTCHHHHHHHHTTCHHHHHHHHHHHHHHHCCSEE
T ss_pred CCCCeEEEEECCcccHHHHHHHH-hhccccccCccCHHHHHHHHHHcCCCcccccccCCCHHHHHHHHHHHHHhcCCCeE
Confidence 467888888776542 345 7899999999999999855422 1 0114455566666665 466654
Q ss_pred EEE
Q psy14735 236 IIT 238 (340)
Q Consensus 236 vvt 238 (340)
.|.
T Consensus 350 hvH 352 (467)
T 1gc5_A 350 HFH 352 (467)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 74
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=97.88 E-value=4.8e-05 Score=71.53 Aligned_cols=169 Identities=6% Similarity=-0.015 Sum_probs=100.2
Q ss_pred ccCCcEEEEeCCCCHHHHHHHHHhchhcccCCceEEEeCCCCCCCCchhhhhcCcEEEeCHHHHHHhhcC-----CCCC-
Q psy14735 143 LLKAKVIMFQGETPWETTLYCLSKLHVSLESRAKIIVNPSPAVYPLNPIVMILADIICINEQEAEIITDM-----KINN- 216 (340)
Q Consensus 143 ~~~~~~v~i~~~~~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~~~dil~~n~~E~~~l~~~-----~~~~- 216 (340)
.++++++++..-...+.. ++.+.+ .. . |+++|...-........++...|+++|..|+..|++. +..+
T Consensus 290 ~~~~~a~~iGPGlG~~~~-~l~~~l---~~-~-p~VlDADaL~~~~~~~~~~~~~VlTPh~~E~~rL~g~~~~~v~~~~~ 363 (475)
T 3k5w_A 290 PNLLSAFALGMGLENIPK-DFNRWL---EL-A-PCVLDAGVFYHKEILQALEKEAVLTPHPKEFLSLLNLVGINISMLEL 363 (475)
T ss_dssp CSSCSEEEECTTCSSCCT-THHHHH---HH-S-CEEEEGGGGGSGGGGTTTTSSEEEECCHHHHHHHHHHTSCCCCTTSG
T ss_pred ccCCCEEEEcCCCCCCHH-HHHHHH---hc-C-CEEEECcccCCchhhhccCCCEEECCCHHHHHHHhCCccCCCCcchh
Confidence 367889988632211001 122233 22 4 9999986542111123345568999999999999986 4333
Q ss_pred hhhHHHHHHHHHhcC-CCEEEEEecCCceEEEecCCCceEEEccCCCcCcccCCCcchHHHHHHHHHHHcCCCCCHHHHH
Q psy14735 217 EEDLADCMEKLLDMK-CNTVIITLGGSGVVYATRDNPRLKTITVDHVEYPIESEGVGDCFVGALAYYLCYFPQLPLGEII 295 (340)
Q Consensus 217 ~~~~~~~~~~l~~~g-~~~vvvt~G~~G~~~~~~~~~~~~~~p~~~~~~vvdttGaGDaF~ag~~~~l~~~~g~~~~~a~ 295 (340)
.++..++++.+.++. -..|++| |.. .++++.+ +.+..+. ......+.|.||.+.+.+...+.+ +.++.+|+
T Consensus 364 ~~d~~~aa~~la~~~g~~~VvlK-G~~-~vI~~~~--~~~~~~~--g~~~mat~GtGdvLsg~Iaa~lA~--g~~~~~Aa 435 (475)
T 3k5w_A 364 LDNKLEIARDFSQKYPKVVLLLK-GAN-TLIAHQG--QVFINIL--GSVALAKAGSGDVLAGLILSLLSQ--NYTPLDAA 435 (475)
T ss_dssp GGSCC--CHHHHHHCTTEEEEEC-SSS-EEEEETT--EEEEECC--CCGGGCSTTHHHHHHHHHHHHHHT--TCCHHHHH
T ss_pred HHHHHHHHHHHHHHcCCeEEEEe-CCC-CEEECCC--EEEEECC--CCCCCCCCCHHHHHHHHHHHHHHc--CCCHHHHH
Confidence 235567777787755 4455555 443 3444433 4444433 344567899999999999999999 99999999
Q ss_pred HHHHHHHHHHhcccCCCCCCCCccCcchhhh
Q psy14735 296 LRSCHVARQSLFNVGLQNSFPDKETLPDNLF 326 (340)
Q Consensus 296 ~~a~~~Aa~~~~~~g~~~~~~~~~~v~~~l~ 326 (340)
..|...-+.+-+......+ ....++-+.|.
T Consensus 436 ~~a~~lhg~ag~~a~~~~~-~~a~dl~~~l~ 465 (475)
T 3k5w_A 436 INASLAHALASLEFKNNYA-LTPLDLIEKIK 465 (475)
T ss_dssp HHHHHHHHHGGGGCSSTTC-CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCC-cCHHHHHHHhh
Confidence 8887665555443211111 24455555553
No 75
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=61.51 E-value=17 Score=28.62 Aligned_cols=102 Identities=11% Similarity=0.056 Sum_probs=57.9
Q ss_pred CCCHHHHHHHHhhccCCcEEEEeCCC-CHHHHHHHHHhchhcccCCceEEEeC-CCCCCCCchhhhhcCcEEEeCHHHHH
Q psy14735 130 YLSASDIDAAKNLLLKAKVIMFQGET-PWETTLYCLSKLHVSLESRAKIIVNP-SPAVYPLNPIVMILADIICINEQEAE 207 (340)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~~v~i~~~~-~~~~~~~~~~~a~~~~~~~~~v~~d~-~~~~~~~~~~~l~~~dil~~n~~E~~ 207 (340)
.++.+.++.+.+.+.+++-+++.|.. +..+...+.... ...|.++.+-. ...........+..-|++++=
T Consensus 23 ~l~~~~l~~~~~~i~~a~~I~i~G~G~S~~~a~~~~~~l---~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~i----- 94 (187)
T 3sho_A 23 QTQPEAIEAAVEAICRADHVIVVGMGFSAAVAVFLGHGL---NSLGIRTTVLTEGGSTLTITLANLRPTDLMIGV----- 94 (187)
T ss_dssp TCCHHHHHHHHHHHHHCSEEEEECCGGGHHHHHHHHHHH---HHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEE-----
T ss_pred hCCHHHHHHHHHHHHhCCEEEEEecCchHHHHHHHHHHH---HhcCCCEEEecCCchhHHHHHhcCCCCCEEEEE-----
Confidence 45677777777777777777776644 334445555555 55677776543 221100001122233433320
Q ss_pred HhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCc
Q psy14735 208 IITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSG 243 (340)
Q Consensus 208 ~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 243 (340)
...|. + .+..++++.+.++|++.+.||.-...
T Consensus 95 S~sG~---t-~~~~~~~~~ak~~g~~vi~IT~~~~s 126 (187)
T 3sho_A 95 SVWRY---L-RDTVAALAGAAERGVPTMALTDSSVS 126 (187)
T ss_dssp CCSSC---C-HHHHHHHHHHHHTTCCEEEEESCTTS
T ss_pred eCCCC---C-HHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 01222 2 56778888888899999999975543
No 76
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=47.91 E-value=65 Score=26.62 Aligned_cols=61 Identities=11% Similarity=0.103 Sum_probs=42.7
Q ss_pred CCCHHHHHHHHhhccCCcEEEEeCCC--CHHHHHHHHHhchhcccCCceEEEeCCCCCCCCchhhhhcCcEEE
Q psy14735 130 YLSASDIDAAKNLLLKAKVIMFQGET--PWETTLYCLSKLHVSLESRAKIIVNPSPAVYPLNPIVMILADIIC 200 (340)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~~v~i~~~~--~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~~~dil~ 200 (340)
..+.+.++.+. -..+|++.++|+. ..+...++++.. ++...|+++-|+.. ..+.+.+|.++
T Consensus 18 ~~~~~~~~~~~--~~GtD~i~vGGs~gvt~~~~~~~v~~i---k~~~~Pvvlfp~~~-----~~v~~gaD~~l 80 (228)
T 3vzx_A 18 DLPDEQLEILC--ESGTDAVIIGGSDGVTEDNVLRMMSKV---RRFLVPCVLEVSAI-----EAIVPGFDLYF 80 (228)
T ss_dssp CCCTTHHHHHH--TSSCSEEEECCCSCCCHHHHHHHHHHH---TTSSSCEEEECSCG-----GGCCSCCSEEE
T ss_pred CCCHHHHHHHH--HcCCCEEEECCcCCCCHHHHHHHHHHh---hccCCCEEEeCCCH-----HHccccCCEEE
Confidence 33445555432 4568999999875 678889999999 77999999987753 23446677554
No 77
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=47.78 E-value=12 Score=27.64 Aligned_cols=69 Identities=10% Similarity=0.023 Sum_probs=46.9
Q ss_pred HHHHHHhhc-cCCcEEEEeCCCCHHHHHHHHHhchhcccCCceEEEeCCCC---CCCCchhhhhcCcEEEeCHHHH
Q psy14735 135 DIDAAKNLL-LKAKVIMFQGETPWETTLYCLSKLHVSLESRAKIIVNPSPA---VYPLNPIVMILADIICINEQEA 206 (340)
Q Consensus 135 ~i~~~~~~~-~~~~~v~i~~~~~~~~~~~~~~~a~~~~~~~~~v~~d~~~~---~~~~~~~~l~~~dil~~n~~E~ 206 (340)
|...+.... ..++++.+.|.++.+.+..+.+.. +..++.++.|+... .+..+...++.+...++...+.
T Consensus 15 D~~~L~~~~~~~~~iI~t~Gsi~~~~l~~I~~~~---~~r~VIi~TD~D~~GekIRk~i~~~lp~~~hafi~r~~~ 87 (119)
T 2fcj_A 15 DKQKVAAVLNEPVVIVCTNGTISDARLEELADEL---EGYDVYLLADADEAGEKLRRQFRRMFPEAEHLYIDRAYR 87 (119)
T ss_dssp HHHHHHHHBSSCCEEEECCSCCCHHHHHHHHHHT---TTSEEEEECCSSHHHHHHHHHHHHHCTTSEEECCCTTTC
T ss_pred HHHHHHHhcCCCCCEEEeCCccCHHHHHHHHHHh---cCCCEEEEECCCccHHHHHHHHHHHCCCCcEEeccCCcc
Confidence 444444444 467888888887877777777777 77777777788643 2334457778888888877764
No 78
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=47.35 E-value=1.1e+02 Score=25.36 Aligned_cols=64 Identities=20% Similarity=0.212 Sum_probs=44.6
Q ss_pred cCCCCCHHHHHHHHhhccCCcEEEEeCCC--CHHHHHHHHHhchhcccCCceEEEeCCCCCCCCchhhhhcCcEEE
Q psy14735 127 ANTYLSASDIDAAKNLLLKAKVIMFQGET--PWETTLYCLSKLHVSLESRAKIIVNPSPAVYPLNPIVMILADIIC 200 (340)
Q Consensus 127 ~~~~~~~~~i~~~~~~~~~~~~v~i~~~~--~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~~~dil~ 200 (340)
++...+.+.++.+. -..+|++.++++. ..+...++++.+ ++...|+++-|.... .+.+.+|.++
T Consensus 20 Pdk~~~~~~l~~~~--~~GtDaI~vGgs~gvt~~~~~~~v~~i---k~~~~Piil~p~~~~-----~~~~gaD~il 85 (235)
T 3w01_A 20 PAKHISDDDLDAIC--MSQTDAIMIGGTDDVTEDNVIHLMSKI---RRYPLPLVLEISNIE-----SVMPGFDFYF 85 (235)
T ss_dssp TTSCCCHHHHHHHH--TSSCSEEEECCSSCCCHHHHHHHHHHH---TTSCSCEEEECCCST-----TCCTTCSEEE
T ss_pred CCCcCCHHHHHHHH--HcCCCEEEECCcCCcCHHHHHHHHHHh---cCcCCCEEEecCCHH-----HhhcCCCEEE
Confidence 44556667666542 4568999998864 678889999999 778999998776431 2345666443
No 79
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=46.85 E-value=19 Score=28.75 Aligned_cols=100 Identities=11% Similarity=-0.003 Sum_probs=54.9
Q ss_pred CCCHHHHHHHHhhccCCc-EEEEeCCC-CHHHHHHHHHhchhcccCCceEEEeC-CCCCCCCchhhhhcCcEEEe-CHHH
Q psy14735 130 YLSASDIDAAKNLLLKAK-VIMFQGET-PWETTLYCLSKLHVSLESRAKIIVNP-SPAVYPLNPIVMILADIICI-NEQE 205 (340)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~-~v~i~~~~-~~~~~~~~~~~a~~~~~~~~~v~~d~-~~~~~~~~~~~l~~~dil~~-n~~E 205 (340)
.++++.++.+.+.+.+++ -+++.|.- +.-+...+.... ...+.++.+-. ..... .....+..-|+++. +
T Consensus 28 ~l~~~~i~~~~~~i~~a~~~I~i~G~G~S~~~A~~~~~~l---~~~g~~~~~~~~~~~~~-~~~~~~~~~dvvI~iS--- 100 (201)
T 3fxa_A 28 VTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSF---NCIERPAVFLTPSDAVH-GTLGVLQKEDILILIS--- 100 (201)
T ss_dssp HSCHHHHHHHHHHHHHCSSCEEEECCTHHHHHHHHHHHHH---HHTTCCEEECCHHHHTT-TGGGGCCTTCEEEEEC---
T ss_pred hcCHHHHHHHHHHHHhcCCcEEEEEecHHHHHHHHHHHHH---HhcCCcEEEeCchHHHh-hhhhcCCCCCEEEEEe---
Confidence 356677777767777773 56665543 333444444445 55677765422 11111 11122333454433 1
Q ss_pred HHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCc
Q psy14735 206 AEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSG 243 (340)
Q Consensus 206 ~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 243 (340)
..|. + .+..++++.+.++|++.+.||.-...
T Consensus 101 ---~sG~---t-~~~~~~~~~ak~~g~~vi~IT~~~~s 131 (201)
T 3fxa_A 101 ---KGGN---T-GELLNLIPACKTKGSTLIGVTENPDS 131 (201)
T ss_dssp ---SSSC---C-HHHHTTHHHHHHHTCEEEEEESCTTS
T ss_pred ---CCCC---C-HHHHHHHHHHHHcCCeEEEEECCCCC
Confidence 1222 1 46667788888899999999985544
No 80
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=45.28 E-value=27 Score=27.25 Aligned_cols=99 Identities=8% Similarity=0.051 Sum_probs=52.0
Q ss_pred CCCHHHHHHHHhhccCCc-EEEEeCCC-CHHHHHHHHHhchhcccCCceEEEeCCCCC-CCCchhhhhcCcEEEe-CHHH
Q psy14735 130 YLSASDIDAAKNLLLKAK-VIMFQGET-PWETTLYCLSKLHVSLESRAKIIVNPSPAV-YPLNPIVMILADIICI-NEQE 205 (340)
Q Consensus 130 ~~~~~~i~~~~~~~~~~~-~v~i~~~~-~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~-~~~~~~~l~~~dil~~-n~~E 205 (340)
.+++ .++.+.+.+.+++ -+++.|.. +......+.... ...|.++.+-..... .... ..+..-|+++. +.
T Consensus 33 ~~~~-~i~~~~~~i~~a~~~I~i~G~G~S~~~a~~~~~~l---~~~g~~~~~~~~~~~~~~~~-~~~~~~d~vI~iS~-- 105 (183)
T 2xhz_A 33 YINQ-NFTLACEKMFWCKGKVVVMGMGASGHIGRKMAATF---ASTGTPSFFVHPGEAAHGDL-GMVTPQDVVIAISN-- 105 (183)
T ss_dssp TSSH-HHHHHHHHHHTCSSCEEEEECHHHHHHHHHHHHHH---HTTTCCEEECCTTHHHHHTS-TTCCTTCEEEEECS--
T ss_pred HHHH-HHHHHHHHHHhCCCeEEEEeecHHHHHHHHHHHHH---HhcCceEEEeCchHHhhhhh-ccCCCCCEEEEEeC--
Confidence 3455 6666666676665 55554432 223344445555 556666654322110 0000 11223343322 11
Q ss_pred HHHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCc
Q psy14735 206 AEIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSG 243 (340)
Q Consensus 206 ~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 243 (340)
.|. + .+..++++.+.++|++.+.||.....
T Consensus 106 ----sG~---t-~~~~~~~~~ak~~g~~vi~IT~~~~s 135 (183)
T 2xhz_A 106 ----SGE---S-SEITALIPVLKRLHVPLICITGRPES 135 (183)
T ss_dssp ----SSC---C-HHHHHHHHHHHTTTCCEEEEESCTTS
T ss_pred ----CCC---C-HHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 222 2 56778888888899999999986554
No 81
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=43.78 E-value=48 Score=26.93 Aligned_cols=102 Identities=6% Similarity=0.035 Sum_probs=54.9
Q ss_pred CCCHHHHHHHHhhccC-----CcEEEEeCCC-CHHHHHHHHHhchhcccCCceEEEeCCCCCCCCchhhhhcCcEEEeCH
Q psy14735 130 YLSASDIDAAKNLLLK-----AKVIMFQGET-PWETTLYCLSKLHVSLESRAKIIVNPSPAVYPLNPIVMILADIICINE 203 (340)
Q Consensus 130 ~~~~~~i~~~~~~~~~-----~~~v~i~~~~-~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~~~dil~~n~ 203 (340)
.++.+.++.+.+.+.+ ++-+++.|.. +.-+...+.... ...|.++.+-............+..-|+++.=
T Consensus 38 ~ld~~~i~~~~~~i~~~a~~~a~~I~i~G~G~S~~~A~~~~~~l---~~lg~~~~~~~~~~~~~~~~~~~~~~DlvI~i- 113 (220)
T 3etn_A 38 IPVTDAYEKAVELIVEQIHRKKGKLVTSGMGKAGQIAMNIATTF---CSTGIPSVFLHPSEAQHGDLGILQENDLLLLI- 113 (220)
T ss_dssp CCCCTHHHHHHHHHHHHTTTTCCCEEEECSHHHHHHHHHHHHHH---HHTTCCEEECCTTGGGBTGGGGCCTTCEEEEE-
T ss_pred hcCHHHHHHHHHHHHhHhhccCCEEEEEEecHHHHHHHHHHHHH---HhcCCcEEEeCCHHHHHhhhccCCCCCEEEEE-
Confidence 3455666665555555 6667665543 223344445555 55676665432221111111233344544330
Q ss_pred HHHHHhhcCCCCChhhHHHHHHHHHh--cCCCEEEEEecCCc
Q psy14735 204 QEAEIITDMKINNEEDLADCMEKLLD--MKCNTVIITLGGSG 243 (340)
Q Consensus 204 ~E~~~l~~~~~~~~~~~~~~~~~l~~--~g~~~vvvt~G~~G 243 (340)
...|. + .+..++++.+.+ +|++.+.||.-...
T Consensus 114 ----S~SG~---t-~~~i~~~~~ak~~~~Ga~vI~IT~~~~s 147 (220)
T 3etn_A 114 ----SNSGK---T-REIVELTQLAHNLNPGLKFIVITGNPDS 147 (220)
T ss_dssp ----CSSSC---C-HHHHHHHHHHHHHCTTCEEEEEESCTTS
T ss_pred ----cCCCC---C-HHHHHHHHHHHhcCCCCeEEEEECCCCC
Confidence 01232 1 577788888888 99999999975443
No 82
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=34.95 E-value=54 Score=27.75 Aligned_cols=23 Identities=30% Similarity=0.333 Sum_probs=19.4
Q ss_pred CChHHHHHHHHHhcCCceeEEEE
Q psy14735 51 SGKGANQCVAAAKLRASVALISK 73 (340)
Q Consensus 51 GG~~~n~a~~l~~lG~~v~~~~~ 73 (340)
||-|..++..|++.|.+|.+++.
T Consensus 26 ~gIG~~~a~~L~~~G~~V~~~~r 48 (291)
T 3rd5_A 26 SGLGAVTARELARRGATVIMAVR 48 (291)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEES
T ss_pred ChHHHHHHHHHHHCCCEEEEEEC
Confidence 67899999999999998877654
No 83
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=34.93 E-value=28 Score=29.67 Aligned_cols=20 Identities=25% Similarity=0.469 Sum_probs=16.2
Q ss_pred HHHHHHHHHhcCCceeEEEE
Q psy14735 54 GANQCVAAAKLRASVALISK 73 (340)
Q Consensus 54 ~~n~a~~l~~lG~~v~~~~~ 73 (340)
|...|+.|+++|.+|.++-.
T Consensus 18 GlsAA~~lar~g~~v~lie~ 37 (304)
T 4fk1_A 18 GLNASLVLGRARKQIALFDN 37 (304)
T ss_dssp HHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEeC
Confidence 56778889999999988853
No 84
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=33.73 E-value=1.1e+02 Score=23.71 Aligned_cols=97 Identities=12% Similarity=0.129 Sum_probs=55.2
Q ss_pred CCCCHHHHHHHHhhccCCcEEEEeCCCC-HHHHHHHHHhchhcccCCceEEEeCCCCCCCCchhhhhcCcEEEe-CHHHH
Q psy14735 129 TYLSASDIDAAKNLLLKAKVIMFQGETP-WETTLYCLSKLHVSLESRAKIIVNPSPAVYPLNPIVMILADIICI-NEQEA 206 (340)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~~~dil~~-n~~E~ 206 (340)
..++.+.++.+.+.+.+++-+++.|... .-+...+...+ ...|.++.+-.... ...+..-|+++. +.
T Consensus 20 ~~l~~~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l---~~~g~~~~~~~~~~-----~~~~~~~d~vI~iS~--- 88 (186)
T 1m3s_A 20 AYISNEEADQLADHILSSHQIFTAGAGRSGLMAKSFAMRL---MHMGFNAHIVGEIL-----TPPLAEGDLVIIGSG--- 88 (186)
T ss_dssp TTCCHHHHHHHHHHHHHCSCEEEECSHHHHHHHHHHHHHH---HHTTCCEEETTSTT-----CCCCCTTCEEEEECS---
T ss_pred HhcCHHHHHHHHHHHHcCCeEEEEecCHHHHHHHHHHHHH---HhcCCeEEEeCccc-----ccCCCCCCEEEEEcC---
Confidence 3466777777777777777777665432 23344444444 55566665532211 122233343332 11
Q ss_pred HHhhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCc
Q psy14735 207 EIITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSG 243 (340)
Q Consensus 207 ~~l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 243 (340)
.|. + .+..++++.+.++|++.+.||.....
T Consensus 89 ---sG~---t-~~~~~~~~~ak~~g~~vi~IT~~~~s 118 (186)
T 1m3s_A 89 ---SGE---T-KSLIHTAAKAKSLHGIVAALTINPES 118 (186)
T ss_dssp ---SSC---C-HHHHHHHHHHHHTTCEEEEEESCTTS
T ss_pred ---CCC---c-HHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 122 2 56777888888899999999986543
No 85
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=33.52 E-value=1.5e+02 Score=25.92 Aligned_cols=100 Identities=10% Similarity=-0.064 Sum_probs=60.4
Q ss_pred CcCCCCC-HHHHHHHHhhccCCcEEEEeCCCCHHHHHHHHHhchhcccCCceEEEeCCCCCCCCchhhhhcCcEEEeCHH
Q psy14735 126 GANTYLS-ASDIDAAKNLLLKAKVIMFQGETPWETTLYCLSKLHVSLESRAKIIVNPSPAVYPLNPIVMILADIICINEQ 204 (340)
Q Consensus 126 ~~~~~~~-~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~~~dil~~n~~ 204 (340)
.++..++ .++-..+.+.+++.++.++.-+++++-...+.+.. ++.++|+..|-+-........+...+|++.+...
T Consensus 179 DaN~~~t~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~---~~~~ipIa~dE~~~~~~~~~~~~~a~d~i~~k~~ 255 (338)
T 3ijl_A 179 DANQGWKDRQYALDMIHWLKEKGIVMIEQPMPKEQLDDIAWVT---QQSPLPVFADESLQRLGDVAALKGAFTGINIKLM 255 (338)
T ss_dssp ECTTCCCCHHHHHHHHHHHHHTTEEEEECCSCTTCHHHHHHHH---HTCSSCEEESTTCCSGGGTGGGBTTBSEEEECHH
T ss_pred ECcCCCCCHHHHHHHHHHHhhCCCCEEECCCCCCcHHHHHHHH---hcCCCCEEECCCCCCHHHHHHHHhhCCEEEeccc
Confidence 4677784 66544445567788898998777655455555555 5668999998654332223345578999887664
Q ss_pred HHHHhhcCCCCChhhHHHHHHHHHhcCCCEEE
Q psy14735 205 EAEIITDMKINNEEDLADCMEKLLDMKCNTVI 236 (340)
Q Consensus 205 E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~vv 236 (340)
-..-+ ....+.+....+.|++.++
T Consensus 256 ~~GGi--------t~~~~ia~~A~~~gi~~~~ 279 (338)
T 3ijl_A 256 KCTGM--------REAWKMVTLAHALGMRVMV 279 (338)
T ss_dssp HHTSH--------HHHHHHHHHHHHTTCEEEE
T ss_pred ccCCH--------HHHHHHHHHHHHcCCEEEe
Confidence 43222 3344444544555655443
No 86
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=32.89 E-value=96 Score=24.55 Aligned_cols=95 Identities=12% Similarity=0.068 Sum_probs=53.7
Q ss_pred CCHHHHHHHHhhccCCcEEEEeCCCC-HHHHHHHHHhchhcccCCceEEEeCCCCCCCCchhhhhcCcEEEe-CHHHHHH
Q psy14735 131 LSASDIDAAKNLLLKAKVIMFQGETP-WETTLYCLSKLHVSLESRAKIIVNPSPAVYPLNPIVMILADIICI-NEQEAEI 208 (340)
Q Consensus 131 ~~~~~i~~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~~~dil~~-n~~E~~~ 208 (340)
++.+.++.+.+.+.+++-|++.|.-. .-+...+.... ...|.++.+-..... ..+..-|++++ +
T Consensus 32 l~~~~l~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l---~~~g~~~~~~~~~~~-----~~~~~~DvvI~iS------ 97 (200)
T 1vim_A 32 IDLETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRL---MHLGYTVYVVGETVT-----PRITDQDVLVGIS------ 97 (200)
T ss_dssp CCHHHHHHHHHHHHHSSCEEEECSHHHHHHHHHHHHHH---HHTTCCEEETTSTTC-----CCCCTTCEEEEEC------
T ss_pred cCHHHHHHHHHHHhcCCEEEEEEecHHHHHHHHHHHHH---HhcCCeEEEeCCccc-----cCCCCCCEEEEEe------
Confidence 45666776666676777777765432 23344444444 556666655222111 12223344332 1
Q ss_pred hhcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCc
Q psy14735 209 ITDMKINNEEDLADCMEKLLDMKCNTVIITLGGSG 243 (340)
Q Consensus 209 l~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 243 (340)
..|. + .+..++++.+.++|++.+.||.-...
T Consensus 98 ~SG~---t-~~~i~~~~~ak~~g~~vI~IT~~~~s 128 (200)
T 1vim_A 98 GSGE---T-TSVVNISKKAKDIGSKLVAVTGKRDS 128 (200)
T ss_dssp SSSC---C-HHHHHHHHHHHHHTCEEEEEESCTTS
T ss_pred CCCC---c-HHHHHHHHHHHHCCCeEEEEECCCCC
Confidence 1232 2 56778888888899999999986544
No 87
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=32.36 E-value=43 Score=27.81 Aligned_cols=25 Identities=16% Similarity=0.019 Sum_probs=22.1
Q ss_pred ecCChHHHHHHHHHhcCCceeEEEE
Q psy14735 49 RFSGKGANQCVAAAKLRASVALISK 73 (340)
Q Consensus 49 ~~GG~~~n~a~~l~~lG~~v~~~~~ 73 (340)
..|+.|+-.|.++.+.|++|.+++.
T Consensus 27 SSG~mG~aiA~~~~~~Ga~V~lv~~ 51 (232)
T 2gk4_A 27 STGHLGKIITETLLSAGYEVCLITT 51 (232)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 4678999999999999999999875
No 88
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=31.40 E-value=53 Score=27.86 Aligned_cols=23 Identities=22% Similarity=0.328 Sum_probs=19.3
Q ss_pred CChHHHHHHHHHhcCCceeEEEE
Q psy14735 51 SGKGANQCVAAAKLRASVALISK 73 (340)
Q Consensus 51 GG~~~n~a~~l~~lG~~v~~~~~ 73 (340)
||-|..++..|.+.|.++.+++.
T Consensus 28 ggIG~~la~~l~~~G~~V~~~~r 50 (303)
T 1yxm_A 28 TGIGKAIVKELLELGSNVVIASR 50 (303)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEES
T ss_pred cHHHHHHHHHHHHCCCEEEEEeC
Confidence 67788999999999998877654
No 89
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=30.72 E-value=43 Score=22.59 Aligned_cols=35 Identities=9% Similarity=-0.073 Sum_probs=28.5
Q ss_pred cCCcEEEEeCCCCHHHHHHHHHhchhcccCCceEEEeC
Q psy14735 144 LKAKVIMFQGETPWETTLYCLSKLHVSLESRAKIIVNP 181 (340)
Q Consensus 144 ~~~~~v~i~~~~~~~~~~~~~~~a~~~~~~~~~v~~d~ 181 (340)
.++.++++..+.+++...++...+ +++++|+++-.
T Consensus 26 gkaklViiA~D~~~~~~~~i~~lc---~~~~Ip~~~v~ 60 (82)
T 3v7e_A 26 GSVKEVVVAKDADPILTSSVVSLA---EDQGISVSMVE 60 (82)
T ss_dssp TCEEEEEEETTSCHHHHHHHHHHH---HHHTCCEEEES
T ss_pred CCeeEEEEeCCCCHHHHHHHHHHH---HHcCCCEEEEC
Confidence 457889999999988888888888 88888876543
No 90
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=30.05 E-value=2.1e+02 Score=22.80 Aligned_cols=82 Identities=10% Similarity=0.118 Sum_probs=52.6
Q ss_pred cEEEEeC-CC--CHHHHHHHHHhchhcccCCceEEEeCCCCC---CCCchhhhhcCcEEEe-----CHHHHHHhhcCCCC
Q psy14735 147 KVIMFQG-ET--PWETTLYCLSKLHVSLESRAKIIVNPSPAV---YPLNPIVMILADIICI-----NEQEAEIITDMKIN 215 (340)
Q Consensus 147 ~~v~i~~-~~--~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~---~~~~~~~l~~~dil~~-----n~~E~~~l~~~~~~ 215 (340)
..|.++| +. .++.+.++++.+ ++.+..+.+...+.. .+.+..+++..+.+.+ +++....+.+..
T Consensus 71 ~~i~~~GGEP~l~~~~l~~l~~~~---~~~~~~i~i~Tng~~~~~~~~~~~l~~~~~~v~isld~~~~~~~~~~~~~~-- 145 (245)
T 3c8f_A 71 GGVTASGGEAILQAEFVRDWFRAC---KKEGIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVS-- 145 (245)
T ss_dssp CEEEEEESCGGGGHHHHHHHHHHH---HTTTCCEEEEECCCCCCCCHHHHHHHHTCSEEEEECCCSSHHHHHHHHSSC--
T ss_pred CeEEEECCCcCCCHHHHHHHHHHH---HHcCCcEEEEeCCCcCcCHHHHHHHHHhCCEEEEeCCCCCHHHhhhccCCC--
Confidence 5566654 33 255568899999 888888877665543 2234455666776655 555566666642
Q ss_pred ChhhHHHHHHHHHhcCCCE
Q psy14735 216 NEEDLADCMEKLLDMKCNT 234 (340)
Q Consensus 216 ~~~~~~~~~~~l~~~g~~~ 234 (340)
.+...+.++.+.+.|.+.
T Consensus 146 -~~~~~~~i~~l~~~g~~v 163 (245)
T 3c8f_A 146 -NHRTLEFAKYLANKNVKV 163 (245)
T ss_dssp -SHHHHHHHHHHHHHTCCE
T ss_pred -HHHHHHHHHHHHhcCCEE
Confidence 367778888888878764
No 91
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=29.52 E-value=44 Score=30.89 Aligned_cols=21 Identities=33% Similarity=0.393 Sum_probs=17.2
Q ss_pred hHHHHHHHHHhcCCceeEEEE
Q psy14735 53 KGANQCVAAAKLRASVALISK 73 (340)
Q Consensus 53 ~~~n~a~~l~~lG~~v~~~~~ 73 (340)
.|..+|..|++.|.+|.++-.
T Consensus 36 aGl~aA~~la~~G~~V~liEk 56 (491)
T 3urh_A 36 GGYVCAIKAAQLGMKVAVVEK 56 (491)
T ss_dssp HHHHHHHHHHHTTCCEEEEES
T ss_pred HHHHHHHHHHHCCCeEEEEec
Confidence 467788889999999888874
No 92
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=29.24 E-value=51 Score=27.21 Aligned_cols=24 Identities=33% Similarity=0.292 Sum_probs=21.4
Q ss_pred ecCChHHHHHHHHHhcCCceeEEE
Q psy14735 49 RFSGKGANQCVAAAKLRASVALIS 72 (340)
Q Consensus 49 ~~GG~~~n~a~~l~~lG~~v~~~~ 72 (340)
..||.|.-+|..+++.|++|.+++
T Consensus 32 SSg~iG~aiA~~~~~~Ga~V~l~~ 55 (226)
T 1u7z_A 32 SSGKMGFAIAAAAARRGANVTLVS 55 (226)
T ss_dssp CCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CccHHHHHHHHHHHHCCCEEEEEE
Confidence 458899999999999999999875
No 93
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=28.26 E-value=79 Score=26.30 Aligned_cols=43 Identities=16% Similarity=0.203 Sum_probs=29.0
Q ss_pred CChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCCcc
Q psy14735 51 SGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSINT 95 (340)
Q Consensus 51 GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi~~ 95 (340)
||-|..++..|++.|.++.+++.-.. ...+.+.+.+++ .+.+.
T Consensus 39 ~gIG~~la~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~-~~~~~ 81 (271)
T 4iin_A 39 KGIGAEIAKTLASMGLKVWINYRSNA-EVADALKNELEE-KGYKA 81 (271)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHHHH-TTCCE
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCCCH-HHHHHHHHHHHh-cCCce
Confidence 56688899999999999887765322 234455666666 55443
No 94
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=26.64 E-value=2.2e+02 Score=21.80 Aligned_cols=72 Identities=11% Similarity=0.065 Sum_probs=34.4
Q ss_pred HHHHHHHHHhchhcccCCceEEEeCCCCCC-CCchhhhhcCcEEEe-----CHHHHHHhhcCCCCChhhHHHHHHHHHhc
Q psy14735 157 WETTLYCLSKLHVSLESRAKIIVNPSPAVY-PLNPIVMILADIICI-----NEQEAEIITDMKINNEEDLADCMEKLLDM 230 (340)
Q Consensus 157 ~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~-~~~~~~l~~~dil~~-----n~~E~~~l~~~~~~~~~~~~~~~~~l~~~ 230 (340)
++...++++.+ ++.+.++.+...+.+. +....+++..|.+.+ +.+....+.|.. .+.+.+.++.+.+.
T Consensus 18 ~~~~~~l~~~~---~~~g~~~~l~TNG~l~~~~~~~l~~~~d~v~isld~~~~~~~~~~~g~~---~~~i~~~i~~l~~~ 91 (182)
T 3can_A 18 PEFLIDILKRC---GQQGIHRAVDTTLLARKETVDEVMRNCELLLIDLKSMDSTVHQTFCDVP---NELILKNIRRVAEA 91 (182)
T ss_dssp HHHHHHHHHHH---HHTTCCEEEECTTCCCHHHHHHHHHTCSEEEEECCCSCHHHHHHHHSSC---SHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH---HHCCCcEEEECCCCCCHHHHHHHHhhCCEEEEECCCCCHHHHHHHhCCC---HHHHHHHHHHHHhC
Confidence 34445666666 5556666665554432 122334444554433 233334444432 24555556666665
Q ss_pred CCCE
Q psy14735 231 KCNT 234 (340)
Q Consensus 231 g~~~ 234 (340)
|.+.
T Consensus 92 g~~v 95 (182)
T 3can_A 92 DFPY 95 (182)
T ss_dssp TCCE
T ss_pred CCeE
Confidence 5543
No 95
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=26.55 E-value=83 Score=25.80 Aligned_cols=58 Identities=21% Similarity=0.191 Sum_probs=45.2
Q ss_pred hccCCcEEEEeCCCCHHHHHHHHHhchhcccCCceEE-EeCCCCCCCCchhhhhcCcEEEeCHHHHHHh
Q psy14735 142 LLLKAKVIMFQGETPWETTLYCLSKLHVSLESRAKII-VNPSPAVYPLNPIVMILADIICINEQEAEII 209 (340)
Q Consensus 142 ~~~~~~~v~i~~~~~~~~~~~~~~~a~~~~~~~~~v~-~d~~~~~~~~~~~~l~~~dil~~n~~E~~~l 209 (340)
.+.++.++++.|+.+...+.+..+.. ++.++||+ +|+.+.. -+.+|++....-.+..+
T Consensus 142 ~lpr~~~lvlags~mgg~i~~~v~~~---~~~~i~vi~l~m~gsv-------~~~~dlvv~dp~qag~~ 200 (223)
T 1y7p_A 142 RLHRAEVLVLAGGIMGGKITEEVKKL---RKSGIRVISLSMFGSV-------PDVADVVISDPVMAGTL 200 (223)
T ss_dssp GSTTEEEEEEESSBCCTHHHHHHHHH---GGGTCEEEEESCBSSH-------HHHSSEEESSHHHHHHH
T ss_pred hccccceeeEecccccchHHHHHHHH---HHCCCeEEEecCCCCc-------cccccEEecCchhhhHH
Confidence 36788999999998877777888888 77799976 6876643 45789998888777655
No 96
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=25.72 E-value=1.6e+02 Score=20.91 Aligned_cols=45 Identities=11% Similarity=0.021 Sum_probs=35.2
Q ss_pred HHHHHHhhccCCcEEEEeCCCCHHHHHHHHHhchhcccCCceEEEeCC
Q psy14735 135 DIDAAKNLLLKAKVIMFQGETPWETTLYCLSKLHVSLESRAKIIVNPS 182 (340)
Q Consensus 135 ~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~a~~~~~~~~~v~~d~~ 182 (340)
.+..+++-..+-|++++-.....+-+...++.+ ++.|..+++-+.
T Consensus 67 nireiwerypqldvvvivttddkewikdfieea---kergvevfvvyn 111 (162)
T 2l82_A 67 NIREIWERYPQLDVVVIVTTDDKEWIKDFIEEA---KERGVEVFVVYN 111 (162)
T ss_dssp HHHHHHHHCTTCCEEEEEECCCHHHHHHHHHHH---HHTTCEEEEEEE
T ss_pred HHHHHHHhCCCCcEEEEEecCcHHHHHHHHHHH---HhcCcEEEEEec
Confidence 345556667788999887777889999999999 999998876443
No 97
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=25.65 E-value=95 Score=23.89 Aligned_cols=94 Identities=14% Similarity=0.091 Sum_probs=52.3
Q ss_pred CHHHHHHHHhhccCCcEEEEeCCCC-HHHHHHHHHhchhcccCCceEEEeCCCCCCCCchhhhhcCcEEEe-CHHHHHHh
Q psy14735 132 SASDIDAAKNLLLKAKVIMFQGETP-WETTLYCLSKLHVSLESRAKIIVNPSPAVYPLNPIVMILADIICI-NEQEAEII 209 (340)
Q Consensus 132 ~~~~i~~~~~~~~~~~~v~i~~~~~-~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~~~dil~~-n~~E~~~l 209 (340)
+.+.++.+.+.+.+++-+++.|... ..+...+.... ...|.++.+-..... ..+..-|+++. + .
T Consensus 26 ~~~~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l---~~~g~~~~~~~~~~~-----~~~~~~d~vi~iS------~ 91 (180)
T 1jeo_A 26 WKNKLDSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRL---MHLGFKSYFVGETTT-----PSYEKDDLLILIS------G 91 (180)
T ss_dssp HHHHHHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHH---HHTTCCEEETTSTTC-----CCCCTTCEEEEEE------S
T ss_pred CHHHHHHHHHHHHhCCEEEEEeecHHHHHHHHHHHHH---HHcCCeEEEeCCCcc-----ccCCCCCEEEEEe------C
Confidence 4455666666666666666655432 23344444444 455666655322111 12233343332 1 1
Q ss_pred hcCCCCChhhHHHHHHHHHhcCCCEEEEEecCCc
Q psy14735 210 TDMKINNEEDLADCMEKLLDMKCNTVIITLGGSG 243 (340)
Q Consensus 210 ~~~~~~~~~~~~~~~~~l~~~g~~~vvvt~G~~G 243 (340)
.|. + .+..++++.+.++|++.+.+|.....
T Consensus 92 sG~---t-~~~~~~~~~ak~~g~~vi~IT~~~~s 121 (180)
T 1jeo_A 92 SGR---T-ESVLTVAKKAKNINNNIIAIVCECGN 121 (180)
T ss_dssp SSC---C-HHHHHHHHHHHTTCSCEEEEESSCCG
T ss_pred CCC---c-HHHHHHHHHHHHCCCcEEEEeCCCCh
Confidence 222 2 46677888888899999999987655
No 98
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=24.76 E-value=44 Score=30.79 Aligned_cols=20 Identities=25% Similarity=0.278 Sum_probs=12.0
Q ss_pred HHHHHHHHHhcCCceeEEEE
Q psy14735 54 GANQCVAAAKLRASVALISK 73 (340)
Q Consensus 54 ~~n~a~~l~~lG~~v~~~~~ 73 (340)
|..+|..|++.|.+|.++-.
T Consensus 23 Gl~aA~~l~~~g~~V~liE~ 42 (479)
T 2hqm_A 23 GVASARRAASYGAKTLLVEA 42 (479)
T ss_dssp HHHHHHHHHHTSCCEEEEES
T ss_pred HHHHHHHHHHCCCcEEEEeC
Confidence 45566666666666666653
No 99
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=24.39 E-value=64 Score=28.57 Aligned_cols=41 Identities=20% Similarity=0.333 Sum_probs=26.5
Q ss_pred cCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCCcccc
Q psy14735 50 FSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSINTKY 97 (340)
Q Consensus 50 ~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi~~~~ 97 (340)
.|-.|.-.|..|++-|.+|.++.. +. .-.+.+++ .|.+..+
T Consensus 37 aG~mG~alA~~La~~G~~V~l~~r---~~---~~~~~i~~-~~~~~~~ 77 (356)
T 3k96_A 37 AGSWGTALALVLARKGQKVRLWSY---ES---DHVDEMQA-EGVNNRY 77 (356)
T ss_dssp CSHHHHHHHHHHHTTTCCEEEECS---CH---HHHHHHHH-HSSBTTT
T ss_pred ccHHHHHHHHHHHHCCCeEEEEeC---CH---HHHHHHHH-cCCCccc
Confidence 355577888999999999887654 32 23455666 5655443
No 100
>2dha_A FLJ20171 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.36 E-value=89 Score=22.76 Aligned_cols=44 Identities=7% Similarity=-0.027 Sum_probs=33.3
Q ss_pred ecCChHHHHHHHHHhcCCceeEEEEecCChhhHHHHHHHhhhcCC
Q psy14735 49 RFSGKGANQCVAAAKLRASVALISKLGNDKFGKSYLEELRKYNSI 93 (340)
Q Consensus 49 ~~GG~~~n~a~~l~~lG~~v~~~~~vG~D~~g~~i~~~l~~~~gi 93 (340)
..||..-.....+..-.....+|+.|.-+..-+.|.+.+.. +|.
T Consensus 6 ~~~g~~~~~~~~~~~~~~~~v~V~nLp~~~te~dl~~~F~~-~g~ 49 (123)
T 2dha_A 6 SGGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFFGQ-HCP 49 (123)
T ss_dssp SSCCCCHHHHHHHHCCSCCEEEECSCCTTCCHHHHHHHHHT-TSC
T ss_pred CCCCCchhHHhhccCCCCCEEEEeCCCCCCCHHHHHHHHHh-hCC
Confidence 34666655666666556678999999988888889999998 763
No 101
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=24.21 E-value=2.6e+02 Score=24.45 Aligned_cols=98 Identities=11% Similarity=-0.049 Sum_probs=53.9
Q ss_pred cCCCCCHHHHHHHHhhccCCcEEEEeCCCCHHHHHHHHHhchhcccCCceEEEeCCCCCCCCchhhh--hcCcEEEeCHH
Q psy14735 127 ANTYLSASDIDAAKNLLLKAKVIMFQGETPWETTLYCLSKLHVSLESRAKIIVNPSPAVYPLNPIVM--ILADIICINEQ 204 (340)
Q Consensus 127 ~~~~~~~~~i~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l--~~~dil~~n~~ 204 (340)
++..++.++...+.+.+++.++.++.-+++++-...+.+.. ++.++||+.|-+-........++ ..+|++.+...
T Consensus 190 an~~~~~~~a~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~---~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~ 266 (354)
T 3jva_A 190 ANQAWTPKDAVKAIQALADYQIELVEQPVKRRDLEGLKYVT---SQVNTTIMADESCFDAQDALELVKKGTVDVINIKLM 266 (354)
T ss_dssp CTTCSCHHHHHHHHHHTTTSCEEEEECCSCTTCHHHHHHHH---HHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHH---HhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECch
Confidence 45567776655555667788888887666544333344444 45578888875533222223444 35788887764
Q ss_pred HHHHhhcCCCCChhhHHHHHHHHHhcCCCEE
Q psy14735 205 EAEIITDMKINNEEDLADCMEKLLDMKCNTV 235 (340)
Q Consensus 205 E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~v 235 (340)
-..-+ ....+.+....++|++.+
T Consensus 267 ~~GGi--------t~~~~i~~~A~~~gi~~~ 289 (354)
T 3jva_A 267 KCGGI--------HEALKINQICETAGIECM 289 (354)
T ss_dssp HHTSH--------HHHHHHHHHHHHTTCEEE
T ss_pred hcCCH--------HHHHHHHHHHHHcCCeEE
Confidence 43322 233444444444555443
No 102
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=23.77 E-value=36 Score=30.10 Aligned_cols=43 Identities=19% Similarity=0.114 Sum_probs=24.3
Q ss_pred CCCCccccccCCCCC-cEEEEcccccceeeecCCCCCCCCeeecCceeeecCChHHHHHHHHHhcCCceeEE
Q psy14735 1 MGDWSHCVANLKDEA-DIVVVGSCLVEFITYVQTLPKPEETVKGYHFEQRFSGKGANQCVAAAKLRASVALI 71 (340)
Q Consensus 1 ~~~~~~~~~~~~~~~-~I~viG~~~iD~~~~~~~~~~~~~~~~~~~~~~~~GG~~~n~a~~l~~lG~~v~~~ 71 (340)
|-.|.|.-+++|+++ +|.+|| .|..|...|..|++.|.+|.++
T Consensus 1 ~~~~~~~~~~~~m~M~kI~iIG----------------------------~G~mG~~la~~L~~~G~~V~~~ 44 (366)
T 1evy_A 1 MSTKQHSAKDELLYLNKAVVFG----------------------------SGAFGTALAMVLSKKCREVCVW 44 (366)
T ss_dssp --------CCCCCCEEEEEEEC----------------------------CSHHHHHHHHHHTTTEEEEEEE
T ss_pred CccchhhhhhHhhccCeEEEEC----------------------------CCHHHHHHHHHHHhCCCEEEEE
Confidence 446888666666544 666665 3566778888888888877655
No 103
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=23.51 E-value=81 Score=29.39 Aligned_cols=23 Identities=4% Similarity=0.099 Sum_probs=17.6
Q ss_pred CChHHHHHHHHHhcCCceeEEEE
Q psy14735 51 SGKGANQCVAAAKLRASVALISK 73 (340)
Q Consensus 51 GG~~~n~a~~l~~lG~~v~~~~~ 73 (340)
|-.|..+|..|++.|.+|.++-.
T Consensus 52 G~aGl~aA~~l~~~G~~V~liE~ 74 (523)
T 1mo9_A 52 GAAGRFGSAYLRAMGGRQLIVDR 74 (523)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEES
T ss_pred CHHHHHHHHHHHHCCCCEEEEeC
Confidence 33467788888888888888865
No 104
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=23.16 E-value=59 Score=29.57 Aligned_cols=20 Identities=0% Similarity=-0.082 Sum_probs=15.2
Q ss_pred hHHHHHHHHHhcCCceeEEE
Q psy14735 53 KGANQCVAAAKLRASVALIS 72 (340)
Q Consensus 53 ~~~n~a~~l~~lG~~v~~~~ 72 (340)
.+.-+++++.++|.++..+.
T Consensus 17 ~a~~i~~aa~~~G~~~v~v~ 36 (446)
T 3ouz_A 17 IALRALRTIKEMGKKAICVY 36 (446)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCEEEEEE
Confidence 35678888888888877764
No 105
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=22.66 E-value=57 Score=28.58 Aligned_cols=23 Identities=22% Similarity=0.098 Sum_probs=19.1
Q ss_pred CChHHHHHHHHHhcCCceeEEEE
Q psy14735 51 SGKGANQCVAAAKLRASVALISK 73 (340)
Q Consensus 51 GG~~~n~a~~l~~lG~~v~~~~~ 73 (340)
|-.|..+|..|++.|.+|.++-.
T Consensus 26 G~~Gl~~A~~La~~G~~V~llE~ 48 (382)
T 1ryi_A 26 GIIGSAIAYYLAKENKNTALFES 48 (382)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECS
T ss_pred CHHHHHHHHHHHhCCCcEEEEeC
Confidence 45688899999999999988865
No 106
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=22.30 E-value=73 Score=30.42 Aligned_cols=21 Identities=19% Similarity=0.290 Sum_probs=14.4
Q ss_pred hHHHHHHHHHhcCCceeEEEE
Q psy14735 53 KGANQCVAAAKLRASVALISK 73 (340)
Q Consensus 53 ~~~n~a~~l~~lG~~v~~~~~ 73 (340)
.|.-+|..|++.|.+|.++-.
T Consensus 34 AGl~aA~~Lar~G~~V~LiEr 54 (591)
T 3i3l_A 34 AGSVAGLTLHKLGHDVTIYER 54 (591)
T ss_dssp HHHHHHHHHHHTTCEEEEECS
T ss_pred HHHHHHHHHHcCCCCEEEEcC
Confidence 466677777777777776643
No 107
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.95 E-value=1.1e+02 Score=21.15 Aligned_cols=33 Identities=18% Similarity=-0.009 Sum_probs=28.1
Q ss_pred cCCcEEEEeCCCCHHHHHHHHHhchhcccCCceEEE
Q psy14735 144 LKAKVIMFQGETPWETTLYCLSKLHVSLESRAKIIV 179 (340)
Q Consensus 144 ~~~~~v~i~~~~~~~~~~~~~~~a~~~~~~~~~v~~ 179 (340)
.++.++++....|.+...++...+ ..+++|++.
T Consensus 30 gka~lViiA~D~~~~~~~~i~~~c---~~~~ip~~~ 62 (99)
T 3j21_Z 30 GGAKLIIVAKNAPKEIKDDIYYYA---KLSDIPVYE 62 (99)
T ss_dssp TCCSEEEEECCCCHHHHHHHHHHH---HHTTCCEEE
T ss_pred CCccEEEEeCCCCHHHHHHHHHHH---HHcCCCEEE
Confidence 468899999999989999998899 889999743
No 108
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=21.54 E-value=2.8e+02 Score=24.80 Aligned_cols=81 Identities=11% Similarity=0.046 Sum_probs=54.2
Q ss_pred CHHHHHHHHHhchhcccCCceEEEeCCCCCCCCchhhhhcCcEEEeCHHHHH------Hhhc--CC------C-CChhhH
Q psy14735 156 PWETTLYCLSKLHVSLESRAKIIVNPSPAVYPLNPIVMILADIICINEQEAE------IITD--MK------I-NNEEDL 220 (340)
Q Consensus 156 ~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~~~dil~~n~~E~~------~l~~--~~------~-~~~~~~ 220 (340)
+.+-...+.+.+ ++.|++++.++.... ....+.+.+|++.+.-.+.. .+.+ .+ . .+.+++
T Consensus 191 ~~egl~~L~~~~---~~~Gl~~~te~~d~~--~~~~l~~~vd~lkIgs~~~~n~~LL~~~a~~gkPVilk~G~~~t~~e~ 265 (385)
T 3nvt_A 191 GLEGLKILKRVS---DEYGLGVISEIVTPA--DIEVALDYVDVIQIGARNMQNFELLKAAGRVDKPILLKRGLSATIEEF 265 (385)
T ss_dssp THHHHHHHHHHH---HHHTCEEEEECCSGG--GHHHHTTTCSEEEECGGGTTCHHHHHHHHTSSSCEEEECCTTCCHHHH
T ss_pred CHHHHHHHHHHH---HHcCCEEEEecCCHH--HHHHHHhhCCEEEECcccccCHHHHHHHHccCCcEEEecCCCCCHHHH
Confidence 356677777777 889999998887543 33455667999998766643 2222 21 1 467889
Q ss_pred HHHHHHHHhcCCCE-EEEEecC
Q psy14735 221 ADCMEKLLDMKCNT-VIITLGG 241 (340)
Q Consensus 221 ~~~~~~l~~~g~~~-vvvt~G~ 241 (340)
..+++.+.+.|.+. +++-+|.
T Consensus 266 ~~Ave~i~~~Gn~~i~L~~rG~ 287 (385)
T 3nvt_A 266 IGAAEYIMSQGNGKIILCERGI 287 (385)
T ss_dssp HHHHHHHHTTTCCCEEEEECCB
T ss_pred HHHHHHHHHcCCCeEEEEECCC
Confidence 99999998877654 4444443
No 109
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=21.39 E-value=2.7e+02 Score=21.06 Aligned_cols=26 Identities=15% Similarity=0.346 Sum_probs=15.8
Q ss_pred hHHHHHHHHHhc-CCCEEEEEecCCce
Q psy14735 219 DLADCMEKLLDM-KCNTVIITLGGSGV 244 (340)
Q Consensus 219 ~~~~~~~~l~~~-g~~~vvvt~G~~G~ 244 (340)
+..++.+.+.+. ....+|+..|+.++
T Consensus 124 d~~eai~~~~~~~~~gDvVLv~Gsg~~ 150 (163)
T 3mvn_A 124 DVDELVMRIVQQAKPNDHILIMSNGAF 150 (163)
T ss_dssp SHHHHHHHHHHHCCTTCEEEEECSSCG
T ss_pred CHHHHHHHHHHhCCCCCEEEEECCCCH
Confidence 445555555543 45567888887663
No 110
>2lkz_A RNA-binding protein 5; RRM; NMR {Homo sapiens}
Probab=21.38 E-value=1.4e+02 Score=20.43 Aligned_cols=41 Identities=15% Similarity=0.255 Sum_probs=30.2
Q ss_pred CCceeEEEEecCChhhHHHHHHHhhhcC-CcccceEeeCCCCC
Q psy14735 65 RASVALISKLGNDKFGKSYLEELRKYNS-INTKYIWLLQDVTT 106 (340)
Q Consensus 65 G~~v~~~~~vG~D~~g~~i~~~l~~~~g-i~~~~v~~~~~~~t 106 (340)
..++.||+.+..+..-+.|.+.+.+ +| +....+.+..+..|
T Consensus 8 ~m~tlfV~nL~~~~tee~L~~~F~~-~G~i~v~~v~i~~d~~t 49 (95)
T 2lkz_A 8 HMDTIILRNIAPHTVVDSIMTALSP-YASLAVNNIRLIKDKQT 49 (95)
T ss_dssp CCCEEEEESCCTTCCHHHHHHHSTT-TCCCCGGGEECCCCSSS
T ss_pred ccCEEEEeCCCCcCCHHHHHHHHHh-hCCccEEEEEEEecCCC
Confidence 4678999999998888889999999 87 45455554434333
No 111
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=21.30 E-value=2.3e+02 Score=25.12 Aligned_cols=97 Identities=10% Similarity=-0.061 Sum_probs=54.5
Q ss_pred cCCCCCHHHHHHHHhhccC--CcEEEEeCCCCHHHHHHHHHhchhcccCCceEEEeCCCCCCCCchhhhh--cCcEEEeC
Q psy14735 127 ANTYLSASDIDAAKNLLLK--AKVIMFQGETPWETTLYCLSKLHVSLESRAKIIVNPSPAVYPLNPIVMI--LADIICIN 202 (340)
Q Consensus 127 ~~~~~~~~~i~~~~~~~~~--~~~v~i~~~~~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~--~~dil~~n 202 (340)
++..++.++...+.+.+++ .++.++.-+++++-...+.+.. +..++||..|-+-..+.....+++ .+|++.+.
T Consensus 193 aN~~w~~~~A~~~~~~l~~~~~~l~~iEeP~~~~d~~~~~~l~---~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k 269 (379)
T 3r0u_A 193 ANQGWNLAQTKQFIEEINKYSLNVEIIEQPVKYYDIKAMAEIT---KFSNIPVVADESVFDAKDAERVIDEQACNMINIK 269 (379)
T ss_dssp CTTCCCHHHHHHHHHHHHTSCCCEEEEECCSCTTCHHHHHHHH---HHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEEC
T ss_pred CCCCcCHHHHHHHHHHHhhcCCCcEEEECCCCcccHHHHHHHH---hcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEEC
Confidence 5666776665555556777 6777887666544344444444 456788888765433222334443 57888876
Q ss_pred HHHHHHhhcCCCCChhhHHHHHHHHHhcCCCE
Q psy14735 203 EQEAEIITDMKINNEEDLADCMEKLLDMKCNT 234 (340)
Q Consensus 203 ~~E~~~l~~~~~~~~~~~~~~~~~l~~~g~~~ 234 (340)
..-..-+ ....+.+....+.|++.
T Consensus 270 ~~~~GGi--------~~~~~ia~~A~~~gi~~ 293 (379)
T 3r0u_A 270 LAKTGGI--------LEAQKIKKLADSAGISC 293 (379)
T ss_dssp HHHHTSH--------HHHHHHHHHHHHTTCEE
T ss_pred ccccCCH--------HHHHHHHHHHHHcCCEE
Confidence 6543222 33444444444556543
No 112
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=21.03 E-value=81 Score=27.75 Aligned_cols=23 Identities=30% Similarity=0.387 Sum_probs=18.6
Q ss_pred CChHHHHHHHHHh-cC-CceeEEEE
Q psy14735 51 SGKGANQCVAAAK-LR-ASVALISK 73 (340)
Q Consensus 51 GG~~~n~a~~l~~-lG-~~v~~~~~ 73 (340)
|-.|.-+|..|++ .| .+|.++-.
T Consensus 30 G~~Gl~~A~~La~~~G~~~V~vlE~ 54 (405)
T 2gag_B 30 GGHGLATAYFLAKNHGITNVAVLEK 54 (405)
T ss_dssp SHHHHHHHHHHHHHHCCCCEEEECS
T ss_pred CHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 4568889999999 89 89888854
No 113
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=21.00 E-value=1.3e+02 Score=26.54 Aligned_cols=79 Identities=9% Similarity=0.013 Sum_probs=48.9
Q ss_pred CCHHHHHHHHHhchhcccCCceEEEeCCCCCCCCchhhhhc-CcEEEeCHHHHHH------hh--cCC------CCChhh
Q psy14735 155 TPWETTLYCLSKLHVSLESRAKIIVNPSPAVYPLNPIVMIL-ADIICINEQEAEI------IT--DMK------INNEED 219 (340)
Q Consensus 155 ~~~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~~-~dil~~n~~E~~~------l~--~~~------~~~~~~ 219 (340)
++.+-...+.+++ ++.|++++-.+-... ....+.+. +|++++--.|+.. +. |.+ ..+.++
T Consensus 88 l~~e~~~~L~~~~---~~~Gi~~~st~~d~~--svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGmat~~E 162 (349)
T 2wqp_A 88 LNEEDEIKLKEYV---ESKGMIFISTLFSRA--AALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSIES 162 (349)
T ss_dssp CCHHHHHHHHHHH---HHTTCEEEEEECSHH--HHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHH
T ss_pred CCHHHHHHHHHHH---HHhCCeEEEeeCCHH--HHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHH
Confidence 4557777777888 888888776554321 12233343 6777765555332 21 222 246789
Q ss_pred HHHHHHHHHhcCCCEEEEE
Q psy14735 220 LADCMEKLLDMKCNTVIIT 238 (340)
Q Consensus 220 ~~~~~~~l~~~g~~~vvvt 238 (340)
+..+++.+.+.|.+.+++.
T Consensus 163 i~~Ave~i~~~G~~iiLlh 181 (349)
T 2wqp_A 163 IKKSVEIIREAGVPYALLH 181 (349)
T ss_dssp HHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEe
Confidence 9999999998887555553
No 114
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=20.87 E-value=1.8e+02 Score=24.67 Aligned_cols=80 Identities=15% Similarity=0.050 Sum_probs=51.4
Q ss_pred HHHHHHHHHhchhcccCCceEEEeCCCCCCCCchhhhhcCcEEEeCHHHHHHh--------hcCC------CC-ChhhHH
Q psy14735 157 WETTLYCLSKLHVSLESRAKIIVNPSPAVYPLNPIVMILADIICINEQEAEII--------TDMK------IN-NEEDLA 221 (340)
Q Consensus 157 ~~~~~~~~~~a~~~~~~~~~v~~d~~~~~~~~~~~~l~~~dil~~n~~E~~~l--------~~~~------~~-~~~~~~ 221 (340)
.+-...+.+.+ ++.|++++.++-... ....+.+.+|++++-..+.+.. ++.+ .. +.+++.
T Consensus 88 ~~gl~~l~~~~---~~~Gl~~~te~~d~~--~~~~l~~~vd~~kIgs~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~ei~ 162 (276)
T 1vs1_A 88 LEGLKLLRRAG---DEAGLPVVTEVLDPR--HVETVSRYADMLQIGARNMQNFPLLREVGRSGKPVLLKRGFGNTVEELL 162 (276)
T ss_dssp HHHHHHHHHHH---HHHTCCEEEECCCGG--GHHHHHHHCSEEEECGGGTTCHHHHHHHHHHTCCEEEECCTTCCHHHHH
T ss_pred HHHHHHHHHHH---HHcCCcEEEecCCHH--HHHHHHHhCCeEEECcccccCHHHHHHHHccCCeEEEcCCCCCCHHHHH
Confidence 35555666667 888999998776543 2334556689998776654432 2332 22 667888
Q ss_pred HHHHHHHhcCCCEEEEEe-cC
Q psy14735 222 DCMEKLLDMKCNTVIITL-GG 241 (340)
Q Consensus 222 ~~~~~l~~~g~~~vvvt~-G~ 241 (340)
.+++.+.+.|.+.+++.. |.
T Consensus 163 ~Ave~i~~~Gn~~i~L~~Rg~ 183 (276)
T 1vs1_A 163 AAAEYILLEGNWQVVLVERGI 183 (276)
T ss_dssp HHHHHHHHTTCCCEEEEECCB
T ss_pred HHHHHHHHcCCCeEEEEeCCc
Confidence 999999887765554444 53
No 115
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=20.64 E-value=67 Score=29.57 Aligned_cols=23 Identities=22% Similarity=0.261 Sum_probs=19.0
Q ss_pred CChHHHHHHHHHhcCCceeEEEE
Q psy14735 51 SGKGANQCVAAAKLRASVALISK 73 (340)
Q Consensus 51 GG~~~n~a~~l~~lG~~v~~~~~ 73 (340)
|=.|..+|+.|++.|.+|.++-.
T Consensus 35 G~aGl~aA~~la~~G~~V~liEk 57 (484)
T 3o0h_A 35 GSGGVRAARLAGALGKRVAIAEE 57 (484)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEES
T ss_pred CHHHHHHHHHHHhCcCEEEEEeC
Confidence 33577889999999999999876
No 116
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=20.56 E-value=97 Score=22.08 Aligned_cols=32 Identities=13% Similarity=0.073 Sum_probs=25.2
Q ss_pred cCCcEEEEeCCCCHHHHHHHHHhchhcccCCceEE
Q psy14735 144 LKAKVIMFQGETPWETTLYCLSKLHVSLESRAKII 178 (340)
Q Consensus 144 ~~~~~v~i~~~~~~~~~~~~~~~a~~~~~~~~~v~ 178 (340)
.++.++++..+.|++....+-..+ +.+++|++
T Consensus 36 gka~lViiA~D~~~~~~~~l~~~c---~~~~Vp~~ 67 (110)
T 3cpq_A 36 GEGKLVVLAGNIPKDLEEDVKYYA---KLSNIPVY 67 (110)
T ss_dssp TCCSEEEECTTCBHHHHHHHHHHH---HHTTCCEE
T ss_pred CCceEEEEeCCCCHHHHHHHHHHH---HHcCCCEE
Confidence 457888888888888888888888 77777754
No 117
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=20.45 E-value=4.2e+02 Score=24.17 Aligned_cols=79 Identities=18% Similarity=0.110 Sum_probs=47.4
Q ss_pred HHHHHHHhhccCCcEEEEe-CCCCHHHHHHHHHhchhcc--cCCceEEEeCCCCCCCCchhhhhcCcEEEeCHHHHHHhh
Q psy14735 134 SDIDAAKNLLLKAKVIMFQ-GETPWETTLYCLSKLHVSL--ESRAKIIVNPSPAVYPLNPIVMILADIICINEQEAEIIT 210 (340)
Q Consensus 134 ~~i~~~~~~~~~~~~v~i~-~~~~~~~~~~~~~~a~~~~--~~~~~v~~d~~~~~~~~~~~~l~~~dil~~n~~E~~~l~ 210 (340)
+-|+....+.+.+|.+++. +....+.+.++.+.. + .....+.++.+|.+ .+-.. ++.
T Consensus 272 eAI~Ra~AY~~GAD~if~E~~~~~~eei~~f~~~v---~~~~P~~~l~~~~sPsf-----nw~~~-----~~~------- 331 (439)
T 3i4e_A 272 QAISRGLAYAPYADLIWCETGKPDLEYAKKFAEAI---HKQFPGKLLSYNCSPSF-----NWKKN-----LDD------- 331 (439)
T ss_dssp HHHHHHHHHTTTCSEEEECCSSCCHHHHHHHHHHH---HHHSTTCEEEEECCSSS-----CHHHH-----SCH-------
T ss_pred HHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHHh---cccCCceEEeeCCCCCC-----cCccc-----CCH-------
Confidence 4455555566789999994 455677788888877 4 23344567777653 11111 122
Q ss_pred cCCCCChhhHHHHHHHHHhcCCCEEEEEe
Q psy14735 211 DMKINNEEDLADCMEKLLDMKCNTVIITL 239 (340)
Q Consensus 211 ~~~~~~~~~~~~~~~~l~~~g~~~vvvt~ 239 (340)
+++....+.|.++|++.++++.
T Consensus 332 -------~~~~~f~~eL~~lGv~~v~~~l 353 (439)
T 3i4e_A 332 -------ATIAKFQKELGAMGYKFQFITL 353 (439)
T ss_dssp -------HHHHTHHHHHHHHTCCEEEETT
T ss_pred -------HHHHHHHHHHHHcCCeEEEeCh
Confidence 3333344556677887777775
No 118
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=20.03 E-value=1.3e+02 Score=21.03 Aligned_cols=34 Identities=12% Similarity=0.051 Sum_probs=27.2
Q ss_pred cCCcEEEEeCCCCHHHHHHHHHhchhcccCCceEEEe
Q psy14735 144 LKAKVIMFQGETPWETTLYCLSKLHVSLESRAKIIVN 180 (340)
Q Consensus 144 ~~~~~v~i~~~~~~~~~~~~~~~a~~~~~~~~~v~~d 180 (340)
.++.+|++....++....++...+ ..+++|+++-
T Consensus 34 gka~lViiA~D~~~~~~~~i~~~c---~~~~vp~~~~ 67 (101)
T 3v7q_A 34 ARAKLVLLTEDASSNTAKKVTDKC---NYYKVPYKKV 67 (101)
T ss_dssp TCCSEEEEETTSCHHHHHHHHHHH---HHTTCCEEEE
T ss_pred CceeEEEEeccccccchhhhcccc---cccCCCeeee
Confidence 468889999999888888888888 7888887643
Done!