BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14739
(360 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8NBZ7|UXS1_HUMAN UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1
SV=1
Length = 420
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/298 (68%), Positives = 242/298 (81%), Gaps = 22/298 (7%)
Query: 51 ERIKILEEKLKSLDVRIPKKYPSVKFQDYQSKRRILITGGAGFVGSHLVDKLMLMGHEVT 110
E ++ L EK++ L+ +KYP VKF + ++RILITGGAGFVGSHL DKLM+ GHEVT
Sbjct: 57 EMVEPLREKIRDLEKSFTQKYPPVKFLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVT 116
Query: 111 VVDNFFTGRKENVEHWFGHPNFEIIHQDIVTPLFVEVDEIYHLASPASPPHYMFNPVKTI 170
VVDNFFTGRK NVEHW GH NFE+I+ D+V PL++EVD+IYHLASPASPP+YM+NP+KT+
Sbjct: 117 VVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTL 176
Query: 171 KTNTIGTINMLGLAKRVGAKILFASTSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKR 230
KTNTIGT+NMLGLAKRVGA++L ASTSEVYGDPEVHPQ E YWGHVNPIGPRACYDE KR
Sbjct: 177 KTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKR 236
Query: 231 VAETLCYAYARHEDLSVRVARIFNTYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSFT 290
VAET+CYAY + E + VRVARIFNT+GPRMHMNDGRVVSNFI+QAL+ E +T
Sbjct: 237 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLT-------- 288
Query: 291 KFWDTLYIPHSFTQVYGLGNQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
VYG G+QTR+FQYV+DLV+GL+ALMNSN + PVNLGNP EH+IL
Sbjct: 289 --------------VYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTIL 332
>sp|Q6DF08|UXS1_XENTR UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1
PE=2 SV=1
Length = 421
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/298 (69%), Positives = 241/298 (80%), Gaps = 22/298 (7%)
Query: 51 ERIKILEEKLKSLDVRIPKKYPSVKFQDYQSKRRILITGGAGFVGSHLVDKLMLMGHEVT 110
E I L EK+++L+ +KYP VKF + ++RILITGGAGFVGSHL DKLM+ GHEVT
Sbjct: 58 EVIAPLREKIQNLERSFTQKYPPVKFLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVT 117
Query: 111 VVDNFFTGRKENVEHWFGHPNFEIIHQDIVTPLFVEVDEIYHLASPASPPHYMFNPVKTI 170
VVDNFFTGRK NVEHW GH NFE+I+ D+V PL++EVD+IYHLASPASPP+YM+NP+KT+
Sbjct: 118 VVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTL 177
Query: 171 KTNTIGTINMLGLAKRVGAKILFASTSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKR 230
KTNTIGT+NMLGLAKRVGA++L ASTSEVYGDPEVHPQ E YWGHVNPIGPRACYDE KR
Sbjct: 178 KTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDEGKR 237
Query: 231 VAETLCYAYARHEDLSVRVARIFNTYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSFT 290
VAET+CYAY + E + VRVARIFNT+GPRMHMNDGRVVSNFI+QAL+ E +T
Sbjct: 238 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLT-------- 289
Query: 291 KFWDTLYIPHSFTQVYGLGNQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
VYG G QTR+FQYV+DLV+GL+ALMNSN + PVNLGNP EHSI+
Sbjct: 290 --------------VYGSGEQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIV 333
>sp|Q5R885|UXS1_PONAB UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2
SV=1
Length = 420
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/298 (68%), Positives = 242/298 (81%), Gaps = 22/298 (7%)
Query: 51 ERIKILEEKLKSLDVRIPKKYPSVKFQDYQSKRRILITGGAGFVGSHLVDKLMLMGHEVT 110
E ++ L EK++ L+ +KYP VKF + ++RILITGGAGFVGSHL DKLM+ GHEVT
Sbjct: 57 EMVEPLREKIRDLEKSFTQKYPPVKFLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVT 116
Query: 111 VVDNFFTGRKENVEHWFGHPNFEIIHQDIVTPLFVEVDEIYHLASPASPPHYMFNPVKTI 170
VVDNFFTGRK NVEHW GH NFE+I+ D+V PL++EVD+IYHLASPASPP+YM+NP+KT+
Sbjct: 117 VVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTL 176
Query: 171 KTNTIGTINMLGLAKRVGAKILFASTSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKR 230
KTNTIGT+NMLGLAKRVGA++L ASTSEVYGDPEVHPQ E YWGHVNPIGPRACYDE KR
Sbjct: 177 KTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKR 236
Query: 231 VAETLCYAYARHEDLSVRVARIFNTYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSFT 290
VAET+CYAY + E + VRVARIFNT+GPRMHMNDGRVVSNFI+QAL+ E +T
Sbjct: 237 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLT-------- 288
Query: 291 KFWDTLYIPHSFTQVYGLGNQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
VYG G+QTR+FQYV+DLV+GL+ALMNSN + PVNLGNP EH+IL
Sbjct: 289 --------------VYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTIL 332
>sp|Q91XL3|UXS1_MOUSE UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2
SV=1
Length = 420
Score = 440 bits (1132), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/298 (68%), Positives = 242/298 (81%), Gaps = 22/298 (7%)
Query: 51 ERIKILEEKLKSLDVRIPKKYPSVKFQDYQSKRRILITGGAGFVGSHLVDKLMLMGHEVT 110
E ++ L EK++ L+ +KYP VKF + ++RILITGGAGFVGSHL DKLM+ GHEVT
Sbjct: 57 EIVEPLREKIRDLEKSFTQKYPPVKFLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVT 116
Query: 111 VVDNFFTGRKENVEHWFGHPNFEIIHQDIVTPLFVEVDEIYHLASPASPPHYMFNPVKTI 170
VVDNFFTGRK NVEHW GH NFE+I+ D+V PL++EVD+IYHLASPASPP+YM+NP+KT+
Sbjct: 117 VVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTL 176
Query: 171 KTNTIGTINMLGLAKRVGAKILFASTSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKR 230
KTNTIGT+NMLGLAKRVGA++L ASTSEVYGDPEVHPQ E YWGHVNPIGPRACYDE KR
Sbjct: 177 KTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKR 236
Query: 231 VAETLCYAYARHEDLSVRVARIFNTYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSFT 290
VAET+CYAY + E + VRVARIFNT+GPRMHMNDGRVVSNFI+QAL+ E +T
Sbjct: 237 VAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLT-------- 288
Query: 291 KFWDTLYIPHSFTQVYGLGNQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
VYG G+QTR+FQYV+DLV+GL+ALMNSN + PVNLGNP EH+IL
Sbjct: 289 --------------VYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTIL 332
>sp|Q5PQX0|UXS1_RAT UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1
PE=1 SV=1
Length = 420
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/293 (69%), Positives = 239/293 (81%), Gaps = 22/293 (7%)
Query: 56 LEEKLKSLDVRIPKKYPSVKFQDYQSKRRILITGGAGFVGSHLVDKLMLMGHEVTVVDNF 115
L EK++ L+ +KYP VKF + ++RILITGGAGFVGSHL DKLM+ GHEVTVVDNF
Sbjct: 62 LREKIRDLEKSFTQKYPPVKFLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNF 121
Query: 116 FTGRKENVEHWFGHPNFEIIHQDIVTPLFVEVDEIYHLASPASPPHYMFNPVKTIKTNTI 175
FTGRK NVEHW GH NFE+I+ D+V PL++EVD+IYHLASPASPP+YM+NP+KT+KTNTI
Sbjct: 122 FTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTI 181
Query: 176 GTINMLGLAKRVGAKILFASTSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKRVAETL 235
GT+NMLGLAKRVGA++L ASTSEVYGDPEVHPQ E YWGHVNPIGPRACYDE KRVAET+
Sbjct: 182 GTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETM 241
Query: 236 CYAYARHEDLSVRVARIFNTYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDT 295
CYAY + E + VRVARIFNT+GPRMHMNDGRVVSNFI+QAL+ E +T
Sbjct: 242 CYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLT------------- 288
Query: 296 LYIPHSFTQVYGLGNQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
VYG G+QTR+FQYV+DLV+GL+ALMNSN + PVNLGNP EH+IL
Sbjct: 289 ---------VYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTIL 332
>sp|Q6GMI9|UXS1_DANRE UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2
SV=2
Length = 418
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/299 (67%), Positives = 242/299 (80%), Gaps = 22/299 (7%)
Query: 50 NERIKILEEKLKSLDVRIPKKYPSVKFQDYQSKRRILITGGAGFVGSHLVDKLMLMGHEV 109
+E + L EK++ L++ +KYP VKF + ++RILITGGAGFVGSHL DKLM+ GHEV
Sbjct: 54 DEAVGPLREKIRELELSFTQKYPPVKFLSEKDRKRILITGGAGFVGSHLTDKLMMDGHEV 113
Query: 110 TVVDNFFTGRKENVEHWFGHPNFEIIHQDIVTPLFVEVDEIYHLASPASPPHYMFNPVKT 169
TVVDNFFTGRK NVEHW GH NFE+I+ D+V PL++EVD+IYHLASPASPP+YM+NP+KT
Sbjct: 114 TVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKT 173
Query: 170 IKTNTIGTINMLGLAKRVGAKILFASTSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAK 229
+KTNTIGT+NMLGLAKRVGA++L ASTSEVYGDPEVHPQ E YWGHVNPIGPRACYDE K
Sbjct: 174 LKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGK 233
Query: 230 RVAETLCYAYARHEDLSVRVARIFNTYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSF 289
RVAET+CYAY + E + VRVARIFNT+G RMHMNDGRVVSNFI+QAL+ E +T
Sbjct: 234 RVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALT------- 286
Query: 290 TKFWDTLYIPHSFTQVYGLGNQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
VYG G+QTR+FQYV+DLV+GL++LMNSN + PVNLGNP EH+IL
Sbjct: 287 ---------------VYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEEHTIL 330
>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0211 PE=3 SV=1
Length = 305
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 132/267 (49%), Gaps = 32/267 (11%)
Query: 85 ILITGGAGFVGSHLVDKLMLMGHEVTVVDNFFTGRKENVEHWFGHPNFEIIHQDIVTPL- 143
IL+TGGAGF+GSH+VDKL+ ++V ++DN TG K N+ N +I +D+ +
Sbjct: 2 ILVTGGAGFIGSHIVDKLIENNYDVIILDNLTTGNKNNINPKAEFVNADIRDKDLDEKIN 61
Query: 144 FVEVDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGA-KILFAST-SEVYG 201
F +V+ + H A+ + + + NPV N +GTIN+L + ++ KI+FAS+ VYG
Sbjct: 62 FKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSGGAVYG 121
Query: 202 DPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSVRVARIFNTYGPRMH 261
+P P E + PI P + Y +K V E Y R + + R N YG R
Sbjct: 122 EPNYLPVDENH-----PINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNVYGERQD 176
Query: 262 -MNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLGNQTRSFQYVTD 320
+ V+S FI + L+N++ ++G GNQTR F YV D
Sbjct: 177 PKGEAGVISIFIDKMLKNQS----------------------PIIFGDGNQTRDFVYVGD 214
Query: 321 LVDGLIALMNSNYTLPVNLGNPTEHSI 347
+ + +N + VN+G E S+
Sbjct: 215 VAKANLMALNWKNEI-VNIGTGKETSV 240
>sp|Q6MWV3|GALE_MYCTU UDP-glucose 4-epimerase OS=Mycobacterium tuberculosis GN=galE1 PE=3
SV=1
Length = 314
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 90/201 (44%), Gaps = 13/201 (6%)
Query: 84 RILITGGAGFVGSHLVDKLMLMGHEVTVVDNFFTGRKENVEHWFGHPNFEIIHQDIVTPL 143
R L+TG AGF+GS LVD+L+ GH V +DNF TGR N+EH + + DIVT
Sbjct: 2 RALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVTAD 61
Query: 144 FVEVDE------IYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKILFASTS 197
+ E ++HLA+ + +P N IGT+ + A++ G + + ++S
Sbjct: 62 LHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHTSS 121
Query: 198 --EVYGDPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSVRVARIFNT 255
+YG P +P PET P P + Y K E + L N
Sbjct: 122 GGSIYGTPPEYPTPETA-----PTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPANV 176
Query: 256 YGPRMHMNDGRVVSNFIIQAL 276
YGPR + V QAL
Sbjct: 177 YGPRQDPHGEAGVVAIFAQAL 197
>sp|A0R5C5|GALE_MYCS2 UDP-glucose 4-epimerase OS=Mycobacterium smegmatis (strain ATCC
700084 / mc(2)155) GN=MSMEG_6142 PE=1 SV=2
Length = 313
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 97/217 (44%), Gaps = 18/217 (8%)
Query: 84 RILITGGAGFVGSHLVDKLMLMGHEVTVVDNFFTGRKENVEHWFGHPNFEIIHQDIV--- 140
R L+TG AGF+GS LVD+L+ GH V +D+ +GR EN+ FE + DIV
Sbjct: 2 RTLVTGAAGFIGSTLVDRLLADGHGVVGLDDLSSGRAENLHSAENSDKFEFVKADIVDAD 61
Query: 141 -TPLFVEV--DEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKILF--AS 195
T L E + I+HLA+ S + +P N +GT+ + A+ G + + +S
Sbjct: 62 LTGLLAEFKPEVIFHLAAQISVKRSVDDPPFDATVNVVGTVRLAEAARLAGVRKVVHTSS 121
Query: 196 TSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSVRVARIFNT 255
VYG P +P E P+ P + Y K E Y DL N
Sbjct: 122 GGSVYGTPPAYPTSEDM-----PVNPASPYAAGKVAGEVYLNMYRNLYDLDCSHIAPANV 176
Query: 256 YGPRM--HMNDGRVVSNF--IIQALRNETITSDSSKS 288
YGPR H G VV+ F + A R I D S +
Sbjct: 177 YGPRQDPHGEAG-VVAIFSEALLAGRTTKIFGDGSDT 212
>sp|Q9FI17|ARAE4_ARATH Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsis thaliana
GN=At5g44480 PE=3 SV=1
Length = 436
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 127/294 (43%), Gaps = 44/294 (14%)
Query: 85 ILITGGAGFVGSHLVDKLMLMGHEVTVVDNFFTGR---KENVEHWFGHPN-FEIIHQDIV 140
+L+TGGAG++GSH +L+ + VT+VDN G + ++ F + I+ D+
Sbjct: 97 VLVTGGAGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADLG 156
Query: 141 TPLFVE-------VDEIYHLASPASPPHYMFNPVK---TIKTNTIGTINMLGLAKRVGAK 190
PL VE D + H A+ A P+K I +NT+G + +A+ K
Sbjct: 157 DPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLE--AMARHKVKK 214
Query: 191 ILFASTSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSVRVA 250
++++ST YG+PE P E P P Y +AK++AE + ++++ D++V +
Sbjct: 215 LIYSSTCATYGEPEKMPITED-----TPQVPINPYGKAKKMAEDMILDFSKNSDMAVMIL 269
Query: 251 RIFNTYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGL-- 308
R FN G G + + R D+++ F IP QV G
Sbjct: 270 RYFNVIGSDPGGRLGEAPRPELREQGRISGACFDAARGF--------IPG--LQVKGTDY 319
Query: 309 ----GNQTRSFQYVTDLVDGLIALMNSN-------YTLPVNLGNPTEHSILACK 351
G R + VTDLVD + + Y + G + + ACK
Sbjct: 320 KTSDGTCIRDYIDVTDLVDAHVKALEKAQPRKVGIYNVGTGKGRSVKEFVEACK 373
>sp|O06329|RMLB_MYCTU dTDP-glucose 4,6-dehydratase OS=Mycobacterium tuberculosis GN=rmlB
PE=1 SV=1
Length = 331
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
Query: 84 RILITGGAGFVGSHLVDKLMLM--GHEVTVVDNF-FTGRKE---NVEHWFGHPNFEIIHQ 137
R+L+TGGAGF+G++ V + VTV+D + GR+E +VE +I
Sbjct: 2 RLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESLADVEDAIRLVQGDITDA 61
Query: 138 DIVTPLFVEVDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKILFASTS 197
++V+ L E D + H A+ + + + NP + TN IGT +L +R G ++ ST
Sbjct: 62 ELVSQLVAESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVRLHHISTD 121
Query: 198 EVYGDPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSVRVARIFNTYG 257
EVYGD E+ + + P P + Y K A+ L A+ R + ++ N YG
Sbjct: 122 EVYGDLELDDRAR--FTESTPYNPSSPYSATKAGADMLVRAWVRSYGVRATISNCSNNYG 179
Query: 258 PRMHMNDGRVVSNFIIQALRN 278
P H V FI + + N
Sbjct: 180 PYQH------VEKFIPRQITN 194
>sp|P21977|GALE_STRTR UDP-glucose 4-epimerase OS=Streptococcus thermophilus GN=galE PE=3
SV=1
Length = 332
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 124/283 (43%), Gaps = 43/283 (15%)
Query: 85 ILITGGAGFVGSHLVDKLMLMGHE-VTVVDNFFTGRKENVEHWFGHPNF-----EIIHQD 138
IL+ GGAG++GSH+VD+L+ G E V VVD+ TG + V HP+ ++ QD
Sbjct: 3 ILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLVTGHRAAV-----HPDAIFYQGDLSDQD 57
Query: 139 IVTPLFVE---VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAK-ILFA 194
+ +F E VD + H A+ + M P+K NT G + +L + G K I+F+
Sbjct: 58 FMRKVFKENPDVDAVIHFAAYSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKYIVFS 117
Query: 195 STSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSVRVARIFN 254
ST+ YG PE P ET NPI P Y E+K + ET+ + + R FN
Sbjct: 118 STAATYGIPEEIPILETT--PQNPINP---YGESKLMMETIMKWSDQAYGIKYVPLRYFN 172
Query: 255 TYGPRMHMNDGRVVSN-----FIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
G + + R S I+Q + + F D P G
Sbjct: 173 VAGANLMVRLVRTRSETHLLPIILQ------VAQGVREKIMIFGDDYNTPD--------G 218
Query: 310 NQTRSFQYVTDLVDG-LIA---LMNSNYTLPVNLGNPTEHSIL 348
R + + DL D L+A L N + NLG+ T S L
Sbjct: 219 TNVRDYVHPFDLADAHLLAVEYLRKGNESTAFNLGSSTGFSNL 261
>sp|A2Z7B3|GME1_ORYSI GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica
GN=OsI_032456 PE=2 SV=1
Length = 378
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 71 YPSVKFQDY--QSKRRILITGGAGFVGSHLVDKLMLMGHEVTVVDNFFTGRKENVEHWFG 128
Y ++ + Y K RI ITG GF+GSH+ +L GH + D + + E F
Sbjct: 16 YAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASD--WKKNEHMTEDMFC 73
Query: 129 HPNFEIIH---QDIVTPLFVEVDEIYHLASPASPPHYM-FNPVKTIKTNTIGTINMLGLA 184
H F ++ D + VD +++LA+ ++ N + NT+ + NML A
Sbjct: 74 H-EFHLVDLRVMDNCLKVTNSVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAA 132
Query: 185 KRVGAKILF-ASTSEVYGDPE-------VHPQPETYWGHVNPIGPRACYDEAKRVAETLC 236
+ G K F AS++ +Y PE V + W P P+ Y K E LC
Sbjct: 133 RINGVKRFFYASSACIY--PEFKQLETNVSLKESDAW----PAEPQDAYGLEKLATEELC 186
Query: 237 YAYARHEDLSVRVARIFNTYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTL 296
Y + + RV R N YGP GR K+ F
Sbjct: 187 KHYTKDFGIECRVGRFHNIYGPFGTWKGGR-------------------EKAPAAFCRKA 227
Query: 297 YIPHSFTQVYGLGNQTRSFQYVTDLVDGLIALMNSNYTLPVNLGN 341
+++G G QTRSF ++ + V+G++ L S++ PVN+G+
Sbjct: 228 QTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGS 272
>sp|A0KGY6|ARNA_AERHH Bifunctional polymyxin resistance protein ArnA OS=Aeromonas
hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240) GN=arnA PE=3 SV=1
Length = 663
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 129/277 (46%), Gaps = 43/277 (15%)
Query: 84 RILITGGAGFVGSHLVDKLML-MGHEVTVVDNFFTGRKENVEHWFGHPNFEIIHQDI-VT 141
R+LI G GF+G+HL ++L+ G+EV +D + V+ + GHPNF + DI +
Sbjct: 319 RVLILGVNGFIGNHLTERLLQDGGYEVYGLDIGSSA----VDRFIGHPNFHFVEGDISIH 374
Query: 142 PLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKILFAST 196
++E D I L + A+P Y NP++ + + + ++ + +I+F ST
Sbjct: 375 TEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYHKRIIFPST 434
Query: 197 SEVYGDPEVHPQPETYWGHVNPIGP----RACYDEAKRVAETLCYAYARHEDLSVRVARI 252
SEVYG + H E + +GP R Y +K++ + + +AY + E L+ + R
Sbjct: 435 SEVYGMCDDHSFDEDSSRLI--VGPINKQRWIYSVSKQLLDRVIWAYGKKEGLNFTLFRP 492
Query: 253 FNTYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLGNQT 312
FN GPR+ D + SS++ T+ L + + Q+ G Q
Sbjct: 493 FNWMGPRLDSLDSARIG---------------SSRAITQLILNL-VDGTPIQLVDGGAQK 536
Query: 313 RSFQYVTDLVDGLIALM-------NSNYTLPVNLGNP 342
R F TD+ DG+ AL N +N+GNP
Sbjct: 537 RCF---TDIEDGIEALFRIIENKENRCDGQIINIGNP 570
>sp|O34886|YTCB_BACSU Uncharacterized UDP-glucose epimerase YtcB OS=Bacillus subtilis
(strain 168) GN=ytcB PE=3 SV=1
Length = 316
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 125/279 (44%), Gaps = 44/279 (15%)
Query: 84 RILITGGAGFVGSHLVDKLML-MGHEVTVVDNF-----FTGRKENVEHWFGHPNFEIIHQ 137
+IL+TG AGF+GSHL ++L+ H V +D+F F+ + +N+++ F I +
Sbjct: 2 KILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIKE 61
Query: 138 DIVTP----LFVEVDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGA--KI 191
+++T L VD I+HLA+ N + I + L A R +
Sbjct: 62 NLLTADLASLLEGVDVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHSIQTF 121
Query: 192 LFASTSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSVRVAR 251
+FASTS VYG+ + T ++P+ P Y K E LC+ Y + + + + R
Sbjct: 122 VFASTSSVYGEKQGKVSENT---SLSPLSP---YGVTKLTGEKLCHVYKQSFGIPIVILR 175
Query: 252 IFNTYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLGNQ 311
F YGPR + I Q L+ + +T ++G G Q
Sbjct: 176 FFTVYGPRQRPD--MAFHRLIKQHLQQKPLT----------------------IFGDGQQ 211
Query: 312 TRSFQYVTDLVDGLIALMNSNYTL--PVNLGNPTEHSIL 348
+R F Y++D V G+ A++ + + VN+G S+L
Sbjct: 212 SRDFTYISDCVKGITAVLGKPHLIGETVNIGGAERASVL 250
>sp|Q04973|VIPB_SALTI Vi polysaccharide biosynthesis protein VipB/TviC OS=Salmonella
typhi GN=vipB PE=3 SV=1
Length = 348
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 99/216 (45%), Gaps = 25/216 (11%)
Query: 83 RRILITGGAGFVGSHLVDKLMLMGHEVTVVDNFFTGRKENV---------EHWFGHPNFE 133
+R LITG AGF+GS L+++L+ + V +DNF TG + N+ E W F
Sbjct: 16 KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQW---SRFI 72
Query: 134 IIHQDI-----VTPLFVEVDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVG 188
I DI VD + H A+ S P + +P+ T N G +NML A+
Sbjct: 73 FIQGDIRKFTDCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH 132
Query: 189 -AKILFASTSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSV 247
+ +A++S YGD P+ E G P+ P A K V E +AR + +
Sbjct: 133 VSSFTYAASSSTYGDHPDLPKIEERIGR--PLSPYAV---TKYVNELYADVFARSYEFNA 187
Query: 248 RVARIFNTYGPRMHMNDG--RVVSNFIIQALRNETI 281
R FN +G R + N V+ +I+ L++E I
Sbjct: 188 IGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPI 223
>sp|A3C4S4|GME1_ORYSJ GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica
GN=GME-1 PE=1 SV=1
Length = 378
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 120/285 (42%), Gaps = 42/285 (14%)
Query: 71 YPSVKFQDY--QSKRRILITGGAGFVGSHLVDKLMLMGHEVTVVDNFFTGRKENVEHWFG 128
Y ++ + Y K RI ITG GF+GSH+ +L GH + D + + E F
Sbjct: 16 YAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASD--WKKNEHMTEDMFC 73
Query: 129 HPNFEIIH---QDIVTPLFVEVDEIYHLASPASPPHYM-FNPVKTIKTNTIGTINMLGLA 184
H F ++ D + VD +++LA+ ++ N + NT+ + NML A
Sbjct: 74 H-EFHLVDLRVMDNCLKVTNGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAA 132
Query: 185 KRVGAKILF-ASTSEVYGDPE-------VHPQPETYWGHVNPIGPRACYDEAKRVAETLC 236
+ G K F AS++ +Y PE V + W P P+ Y K E LC
Sbjct: 133 RINGVKRFFYASSACIY--PEFKQLETNVSLKESDAW----PAEPQDAYGLEKLATEELC 186
Query: 237 YAYARHEDLSVRVARIFNTYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTL 296
Y + + RV R N YGP GR K+ F
Sbjct: 187 KHYTKDFGIECRVGRFHNIYGPFGTWKGGR-------------------EKAPAAFCRKA 227
Query: 297 YIPHSFTQVYGLGNQTRSFQYVTDLVDGLIALMNSNYTLPVNLGN 341
+++G G QTRSF ++ + V+G++ L S++ PVN+G+
Sbjct: 228 QTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGS 272
>sp|Q2R1V8|GME2_ORYSJ GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica
GN=GME-2 PE=2 SV=2
Length = 371
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 118/272 (43%), Gaps = 40/272 (14%)
Query: 82 KRRILITGGAGFVGSHLVDKLMLMGHEVTVVDNFFTGRKENVEHWFGHPNFEIIH---QD 138
K RI ITG GF+ SH+ +L GH + D + + E F H F ++ D
Sbjct: 22 KLRISITGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCH-EFHLVDLRVMD 78
Query: 139 IVTPLFVEVDEIYHLASPASPPHYM-FNPVKTIKTNTIGTINMLGLAKRVGAKILF-AST 196
+ VD +++LA+ ++ N + NT+ + NML A+ G K F AS+
Sbjct: 79 NCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASS 138
Query: 197 SEVYG-----DPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSVRVAR 251
+ +Y D V + W P P+ Y K E LC Y + + RV R
Sbjct: 139 ACIYPEFKQLDTVVSLKESDAW----PAEPQDAYGLEKLATEELCKHYTKDFGIECRVGR 194
Query: 252 IFNTYGPRMHMNDGR--VVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
N YGP GR + F +AL S+ F +++G G
Sbjct: 195 FHNIYGPFGTWKGGREKAPAAFCRKAL-------TSTDRF--------------EMWGDG 233
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGN 341
QTRSF ++ + V+G++ L S++ PVN+G+
Sbjct: 234 LQTRSFTFIDECVEGVLRLTKSDFREPVNIGS 265
>sp|B4ETL7|ARNA_PROMH Bifunctional polymyxin resistance protein ArnA OS=Proteus mirabilis
(strain HI4320) GN=arnA PE=3 SV=1
Length = 660
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 136/300 (45%), Gaps = 45/300 (15%)
Query: 64 DVRI-PKKYPSVKFQDYQSKRRILITGGAGFVGSHLVDKLMLMG-HEVTVVDNFFTGRKE 121
DVR+ PK VK ++R+LI G GF+G+HL ++L+ G +++ +D +
Sbjct: 301 DVRVGPKATAQVK-----RRQRVLILGVNGFIGNHLTERLLKDGNYDIYGMDIGSSA--- 352
Query: 122 NVEHWFGHPNFEIIHQDI-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTI 175
+E + G+P F I D+ + ++E D I L + A+P Y NP++ + +
Sbjct: 353 -IERFIGNPRFHFIEGDVSIHTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFE 411
Query: 176 GTINMLGLAKRVGAKILFASTSEVYG---DPEVHPQPETYWGHVNPIGP-RACYDEAKRV 231
+ ++ + +I+F STSEVYG D E V PI R Y +K++
Sbjct: 412 ENLKIVRYCVKYNKRIIFPSTSEVYGMCDDKEFDEDNSRLI--VGPINKQRWIYSVSKQL 469
Query: 232 AETLCYAYARHEDLSVRVARIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFT 290
+ + +AY E L + R FN GPR+ ++N R+ SS++ T
Sbjct: 470 LDRVIWAYGAKEGLKFTLFRPFNWMGPRLDNLNSARI----------------GSSRAIT 513
Query: 291 KFWDTLYIPHSFTQVYGLGNQTRSFQYVTDLVDGLIALM----NSNYTLPVNLGNPTEHS 346
+ L V G G Q R F + D ++ L ++ N +N+GNPT +
Sbjct: 514 QLILNLVEGSPIKLVDG-GEQKRCFTDINDGIEALFRIIENRDNKCDGQIINIGNPTNEA 572
>sp|Q58455|Y1055_METJA Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1055 PE=3 SV=1
Length = 326
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 123/275 (44%), Gaps = 44/275 (16%)
Query: 83 RRILITGGAGFVGSHLVDKLMLMGHEVTVV-----DNFFTG--RKENVEHWFGHPNFEII 135
+ IL+TG AGF+G HL LM ++ V+ +N++ +++ E + N+ I
Sbjct: 4 KNILVTGSAGFIGFHLSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEILKNYENYTFI 63
Query: 136 H------QDIVTPLF-VEVDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVG 188
D+V L E+D I HL + A + + NP IK+N +GT+N+ A+R
Sbjct: 64 KLDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFARRFD 123
Query: 189 -AKILFASTSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSV 247
K+++AS+S VYG P E V+ P + Y KR E + + Y + +
Sbjct: 124 IEKVVYASSSSVYGGNRKIPFSED--DRVDK--PISLYASTKRSNELMAHVYHHLYGIKM 179
Query: 248 RVARIFNTYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYG 307
R F YG GR ++ KF + + +VY
Sbjct: 180 IGLRFFTVYGEY-----GR------------------PDMAYFKFAKNILLGKE-IEVYN 215
Query: 308 LGNQTRSFQYVTDLVDGLIALMNSNYTLPV-NLGN 341
GN R F Y++D+VDG++ + ++ + NLGN
Sbjct: 216 YGNMERDFTYISDVVDGILRAIKKDFDYEIFNLGN 250
>sp|O84903|GALE_LACCA UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1
Length = 331
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 85 ILITGGAGFVGSHLVDKLMLMGHEVTVVDNFFTGRKENVEHWFGHPNFEIIHQDI----- 139
I + GGAG++GSH V +L+ G +V V+DN TG ++ V+ P DI
Sbjct: 3 IAVLGGAGYIGSHTVKQLLAAGEDVVVLDNLITGHRKAVD-----PRARFYQGDIRDYHF 57
Query: 140 VTPLFVE--VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVG-AKILFAST 196
++ +F + +D I H A+ + P M +P+K NT G I +L + G KI+F+ST
Sbjct: 58 LSQVFSQEKIDGIVHFAAFSIVPESMKDPLKYFDNNTGGMITLLEAMNQFGIKKIVFSST 117
Query: 197 SEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSVRVARIFNTY 256
+ YG+P+ P ET +P P Y E+K E + + L R FN
Sbjct: 118 AATYGEPKQVPIKET-----DPQVPTNPYGESKLAMEKIMHWADVAYGLKFVALRYFNVA 172
Query: 257 GPRMHMNDGRV 267
G M DG +
Sbjct: 173 GA---MPDGSI 180
>sp|B7LM76|ARNA_ESCF3 Bifunctional polymyxin resistance protein ArnA OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=arnA PE=3 SV=1
Length = 660
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
Q + R+LI G GF+G+HL ++L+ H EV +D G + + + HPNF + D
Sbjct: 313 QRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLD---IG-SDAISRFLTHPNFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVQYHKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V PI PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCTDKFFDEDHSNLIVGPINKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENTGNRCDGEII 563
>sp|Q7N3Q7|ARNA_PHOLL Bifunctional polymyxin resistance protein ArnA OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=arnA PE=3
SV=1
Length = 660
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 135/300 (45%), Gaps = 45/300 (15%)
Query: 64 DVRI-PKKYPSVKFQDYQSKRRILITGGAGFVGSHLVDKLMLMG-HEVTVVDNFFTGRKE 121
DVR+ PK + ++R+LI G GF+G+HL ++L+ G +++ +D +
Sbjct: 301 DVRVGPKATTQI-----NHRKRVLILGVNGFIGNHLTERLLRDGNYDIYGMDIGSSA--- 352
Query: 122 NVEHWFGHPNFEIIHQDI-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTI 175
+E + +P F I DI + ++E D + L + A+P Y NP++ + +
Sbjct: 353 -IERFISNPRFHFIEGDINIHTEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFE 411
Query: 176 GTINMLGLAKRVGAKILFASTSEVYG---DPEVHPQPETYWGHVNPIGP-RACYDEAKRV 231
+ ++ + +I+F STSEVYG D E V PI R Y +K++
Sbjct: 412 ENLKIVRYCVKYNKRIIFPSTSEVYGMCDDKEFDEDDSRLI--VGPINKQRWIYSVSKQL 469
Query: 232 AETLCYAYARHEDLSVRVARIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFT 290
+ + +AY E L + R FN GPR+ ++N R+ SS++ T
Sbjct: 470 LDRVIWAYGEKEGLKFTLFRPFNWMGPRLDNLNSARI----------------GSSRAIT 513
Query: 291 KFWDTLYIPHSFTQVYGLGNQTRSFQYVTDLVDGLIALMNSNYTLP----VNLGNPTEHS 346
+ L V G G Q R F + D ++ L ++ + L +N+GNPT +
Sbjct: 514 QLILNLVEGSPIKLVDG-GEQKRCFTDINDGIEALFRIIENREGLCDGQIINIGNPTNEA 572
>sp|Q9ZAE8|RMLB_ACTS5 dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain ATCC 31044
/ CBS 674.73 / SE50/110) GN=acbB PE=3 SV=2
Length = 320
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 110/264 (41%), Gaps = 45/264 (17%)
Query: 84 RILITGGAGFVGSHLVDKLMLMG-------HEVTVVDNF-FTGRKENVEHWFGHPNFEII 135
+IL+TGGAGF+GSH V L+ +VTVVD + G N+ P F +
Sbjct: 2 KILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSFV 61
Query: 136 HQDI-----VTPLFVEVDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKR--VG 188
DI + L D + H A+ + + +N +GT +L A R +G
Sbjct: 62 RGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHHIG 121
Query: 189 AKILFASTSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSVR 248
+ L ST EVYG + W +P+ P + Y +K ++ L AY + + V
Sbjct: 122 -RFLHVSTDEVYGSIDTGS-----WAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDVV 175
Query: 249 VARIFNTYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGL 308
V R N YGPR +++ F+ T+ D L +P VYG
Sbjct: 176 VTRCSNNYGPRQFPE--KMIPLFV-----------------TRLLDGLDVP-----VYGD 211
Query: 309 GNQTRSFQYVTDLVDGLIALMNSN 332
G R + +V+D GL + +
Sbjct: 212 GRNIRDWLHVSDHCRGLALALGAG 235
>sp|Q9SUN3|ARAE3_ARATH Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsis thaliana
GN=At4g20460 PE=2 SV=3
Length = 411
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 125/288 (43%), Gaps = 32/288 (11%)
Query: 85 ILITGGAGFVGSHLVDKLMLMGHEVTVVDNFFTGRKENV---EHWFGHPN-FEIIHQDI- 139
+L+TGGAG++GSH +L+ + VT+VDN G V + F P + I+ D+
Sbjct: 72 VLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQGLFPEPGRLQFIYADLG 131
Query: 140 ----VTPLFVE--VDEIYHLASPASPPHYMFNPVK---TIKTNTIGTINMLGLAKRVGAK 190
V +F E D + H A+ A +P+K I +NT+ + + +A+ K
Sbjct: 132 DAKAVDKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTL--VVLEAVARHKVKK 189
Query: 191 ILFASTSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSVRVA 250
++++ST YG+P+ P E V P P Y +AK++AE + ++++ D++V +
Sbjct: 190 LIYSSTCATYGEPDKMPIVE-----VTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMIL 244
Query: 251 RIFNTYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLGN 310
R FN G G + + R D+++ + G G
Sbjct: 245 RYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAARGVIPGLQVKGTDYK----TGDGT 300
Query: 311 QTRSFQYVTDLVDGLIALMNSN-------YTLPVNLGNPTEHSILACK 351
R + VTDLVD + + Y + G + + ACK
Sbjct: 301 CVRDYIDVTDLVDAHVKALEKAKPRNVGIYNVGTGKGRSVKEFVEACK 348
>sp|Q7WTB1|GALE_LACHE UDP-glucose 4-epimerase OS=Lactobacillus helveticus GN=galE PE=2
SV=1
Length = 330
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 122/282 (43%), Gaps = 40/282 (14%)
Query: 84 RILITGGAGFVGSHLVDKLMLMGHEVTVVDNFFTGRKENVEHWFGHPNFEIIHQDIVTPL 143
++L+ GGAG++GSH V +L+ G++V V+D +TG ++ V+ P + DI
Sbjct: 2 KVLVIGGAGYIGSHAVRELVKEGNDVLVLDALYTGHRKAVD-----PKAKFYQGDIEDTF 56
Query: 144 FV-------EVDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAK-ILFAS 195
V ++D + H A+ + P + P+K N G I++L K ++F+S
Sbjct: 57 LVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMNDANVKYLVFSS 116
Query: 196 TSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSVRVARIFNT 255
++ YG P+ P E +NPI P Y E K + E + + + + R FN
Sbjct: 117 SAATYGIPKKLPITEDT--PLNPINP---YGETKMMMEKIMAWADKADGIKYTALRYFNV 171
Query: 256 YGPRMHMNDGRVVSN-----FIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLGN 310
G +DG + + +I + I+ D FT F D G
Sbjct: 172 AGAS---SDGSIGEDHAPETHLIPNILKSAISGDG--KFTIFGDDYDTKD--------GT 218
Query: 311 QTRSFQYVTDLVDGLIA----LMNSNYTLPVNLGNPTEHSIL 348
R + V DL+D I +M +N + NLG +S L
Sbjct: 219 NVRDYVQVEDLIDAHILALKHMMKTNKSDVFNLGTAHGYSNL 260
>sp|P29782|RMLB_STRGR dTDP-glucose 4,6-dehydratase OS=Streptomyces griseus GN=strE PE=1
SV=1
Length = 328
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 106/254 (41%), Gaps = 39/254 (15%)
Query: 85 ILITGGAGFVGSHLVDKLMLMGHE----VTVVDNF-FTGRKENVEHWFGHPNFEIIHQDI 139
+L+TG AGF+GS V L+ G VT +D + G +N+ GHP + DI
Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDI 64
Query: 140 VTP----LFVEVDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVG-AKILFA 194
+ D++ HLA+ + + + ++TN GT +L A R G A +
Sbjct: 65 CDAPGRRVMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQV 124
Query: 195 STSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSVRVARIFN 254
ST EVYG E W P+ P + Y +K + L A+ L VRV R N
Sbjct: 125 STDEVYGSLE-----HGSWTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSN 179
Query: 255 TYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLGNQTRS 314
YGPR +++ FI T D +P +YG G R
Sbjct: 180 NYGPRQFPE--KLIPRFI-----------------TLLMDGHRVP-----LYGDGLNVRE 215
Query: 315 FQYVTDLVDGLIAL 328
+ +V D V G+ A+
Sbjct: 216 WLHVDDHVRGIEAV 229
>sp|Q9SA77|ARAE1_ARATH UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1
SV=1
Length = 419
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 143/349 (40%), Gaps = 60/349 (17%)
Query: 44 GDLNFANERIK-------ILEEKLKSLDVRIPKKYPSVKFQDYQSKRR-----ILITGGA 91
G L++A+ + K +L L +L + + K+ P+ S+ +L+TGGA
Sbjct: 20 GGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTHVLVTGGA 79
Query: 92 GFVGSHLVDKLMLMGHEVTVVDNFFTGRKENV---EHWFGHPN-FEIIHQDI-----VTP 142
G++GSH +L+ + VT+VDN G V + F P + I+ D+ V
Sbjct: 80 GYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRLQFIYADLGDAKAVNK 139
Query: 143 LFVE--VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAK-ILFASTSEV 199
+F E D + H A+ A P+K T T+ +L G K ++++ST
Sbjct: 140 IFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMAAHGVKTLIYSSTCAT 199
Query: 200 YGDPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSVRVARIFNTYG-- 257
YG+P++ P E P P Y +AK++AE + ++++ D++V + R FN G
Sbjct: 200 YGEPDIMPITEE-----TPQVPINPYGKAKKMAEDIILDFSKNSDMAVMILRYFNVIGSD 254
Query: 258 --------PRMHMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
PR + + +S A R + K D G
Sbjct: 255 PEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYKTAD--------------G 300
Query: 310 NQTRSFQYVTDLVDGLIALMNSN-------YTLPVNLGNPTEHSILACK 351
R + VTDLVD + + Y + G+ + + ACK
Sbjct: 301 TCVRDYIDVTDLVDAHVKALQKAKPRKVGIYNVGTGKGSSVKEFVEACK 349
>sp|Q0TFI7|ARNA_ECOL5 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLCEDHYEVYGLDI----GSDAISRFLNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|P39858|CAPI_STAAU Protein CapI OS=Staphylococcus aureus GN=capI PE=3 SV=1
Length = 334
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 40/258 (15%)
Query: 84 RILITGGAGFVGSHLVDKLMLMGHEVTVVDN----FFTGRKENVEHWFGHPNF-----EI 134
+ILITG AGF+GSHL KL+ GH V VD+ + KE+ G NF ++
Sbjct: 2 KILITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVKL 61
Query: 135 IHQDIVTPLFVEV--DEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAK-I 191
+ D ++ +FV+ + + +LA+ A + + NP I +N +G +N+L ++ + +
Sbjct: 62 ENYDDLSKVFVDEQPEVVVNLAAQAGVRYSIENPRTYIDSNIVGFMNILECSRHFNIQNL 121
Query: 192 LFASTSEVYGDPEVHPQPETYWGHVNPIGPRACYDEAKRVAETLCYAYARHEDLSVRVAR 251
++AS+S VYG P + N P + Y K+ E + + Y+ +L R
Sbjct: 122 IYASSSSVYGANTSKP----FSTSDNIDHPLSLYAATKKSNELMAHTYSHLYNLPTTGLR 177
Query: 252 IFNTYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLGNQ 311
F YGP GR + KF + + VY GN
Sbjct: 178 FFTVYGPW-----GR------------------PDMALFKFTKAI-VNDQAIDVYNHGNM 213
Query: 312 TRSFQYVTDLVDGLIALM 329
R F YV D+V+ + L+
Sbjct: 214 MRDFTYVDDIVEAISRLV 231
>sp|B2TW38|ARNA_SHIB3 Putative bifunctional polymyxin resistance protein ArnA OS=Shigella
boydii serotype 18 (strain CDC 3083-94 / BS512) GN=arnA
PE=5 SV=1
Length = 526
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D G + + + HP+F + D
Sbjct: 179 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLD---IG-SDAISRFLNHPHFHFVEGD 234
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 235 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 294
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 295 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 354
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 355 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 397
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 398 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 429
>sp|B7UFR7|ARNA_ECO27 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D G + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLD---IG-SDAISRFLNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLIDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|A8FRR2|ARNA_SHESH Bifunctional polymyxin resistance protein ArnA OS=Shewanella
sediminis (strain HAW-EB3) GN=arnA PE=3 SV=1
Length = 660
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 82 KRRILITGGAGFVGSHLVDKLMLMG-HEVTVVDNFFTGRKENVEHWFGHPNFEIIHQDI- 139
++++LI G GF+G+HL +L+ G +E+ +D +E HP+F + DI
Sbjct: 317 RQKVLIMGANGFIGNHLTKRLLDDGKYEIYAMDM----SSSQIEQHLSHPDFHFVEGDIT 372
Query: 140 VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKILFA 194
+ ++E D + L + A+P Y NP++ + + + ++ + +I+F
Sbjct: 373 IHNEWIEYHIKKCDIVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRACVKYDKRIIFP 432
Query: 195 STSEVYGDPEVHPQPETYWGHVNPI--GP----RACYDEAKRVAETLCYAYARHEDLSVR 248
STSEVYG E + +P+ GP R Y +K++ + + +AY + ++L
Sbjct: 433 STSEVYG----MCTDEEFDEDTSPLITGPINRQRWIYSTSKQLLDRVIWAYGKKDNLKFT 488
Query: 249 VARIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYG 307
+ R FN GPR+ +N RV SS++ T+ L + G
Sbjct: 489 LFRPFNWMGPRLDSLNSARV----------------GSSRAITQLILNLVEGTPIKLIDG 532
Query: 308 LGNQTRSFQYVTDLVDGLIALMNSNYTLP----VNLGNP 342
G Q R F +++ ++ L ++ + L +N+G+P
Sbjct: 533 -GEQKRCFTDISEAIEALFRVIENKDGLCDGQIINIGSP 570
>sp|Q1R9G0|ARNA_ECOUT Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain UTI89 / UPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D G + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLD---IG-SDAISRFLNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|A1ADA7|ARNA_ECOK1 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O1:K1 / APEC GN=arnA PE=3 SV=1
Length = 660
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D G + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLD---IG-SDAISRFLNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|B7MG22|ARNA_ECO45 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D G + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLD---IG-SDAISRFLNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|Q8FFM1|ARNA_ECOL6 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=arnA PE=3
SV=1
Length = 660
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D G + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLD---IG-SDAISRFMNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|B7NNT4|ARNA_ECO7I Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D G + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLD---IG-SDAISRFLNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|B1LLK9|ARNA_ECOSM Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=arnA PE=3 SV=1
Length = 660
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI----GSDAISRFLNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|Q3YZV1|ARNA_SHISS Bifunctional polymyxin resistance protein ArnA OS=Shigella sonnei
(strain Ss046) GN=arnA PE=3 SV=1
Length = 660
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D G + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLD---IG-SDAISRFLNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|Q32DT3|ARNA_SHIDS Bifunctional polymyxin resistance protein ArnA OS=Shigella
dysenteriae serotype 1 (strain Sd197) GN=arnA PE=3 SV=2
Length = 660
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI----GSDAISRFLNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|B7MXT6|ARNA_ECO81 Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O81 (strain ED1a) GN=arnA PE=3 SV=1
Length = 660
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 130/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D G + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLD---IG-SDAISRFMNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|B7N5M0|ARNA_ECOLU Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=arnA PE=3 SV=1
Length = 660
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI----GSDAISRFLNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|A8GDR7|ARNA_SERP5 Bifunctional polymyxin resistance protein ArnA OS=Serratia
proteamaculans (strain 568) GN=arnA PE=3 SV=1
Length = 660
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 148/345 (42%), Gaps = 61/345 (17%)
Query: 32 VLEDSPLITRL----------RGDLNFANERIKILEEKLKSLDVRIPKKYPSVKFQDYQS 81
VL SPLI + D+ + ++ +E DVR+ K +V +
Sbjct: 259 VLSTSPLIIACGEGALEIVAGQNDVGLYVQGSRLAQEMGIVTDVRLAAKPNAV----MKR 314
Query: 82 KRRILITGGAGFVGSHLVDKLM------LMGHEVTVVDNFFTGRKENVEHWFGHPNFEII 135
+ R+LI G GF+G+HL ++L+ + G ++ + + + G+P F +
Sbjct: 315 RTRVLILGVNGFIGNHLTERLLRDDRYDIYGLDIG---------SDAISRFLGNPRFHFV 365
Query: 136 HQDI-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGA 189
DI + ++E D I L + A+P Y NP++ + + + ++ +
Sbjct: 366 EGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNK 425
Query: 190 KILFASTSEVYGDPEVHPQPETYWGHVNPIGP----RACYDEAKRVAETLCYAYARHEDL 245
+I+F STSEVYG + E + + +GP R Y +K++ + + +AY E L
Sbjct: 426 RIIFPSTSEVYGMCDDKEFDEDHSRLI--VGPINKQRWIYSVSKQLLDRVIWAYGAKEGL 483
Query: 246 SVRVARIFNTYGPRMHMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQV 305
+ R FN GPR+ D + SS++ T+ L + S ++
Sbjct: 484 KFTLFRPFNWMGPRLDNLDAARIG---------------SSRAITQLILNL-VEGSPIKL 527
Query: 306 YGLGNQTRSFQYVTDLVDGLIALMNSNYTLP----VNLGNPTEHS 346
G Q R F + D ++ L ++ + L VN+GNPT +
Sbjct: 528 MDGGAQKRCFTDINDGIEALFRIIENRDGLCDGQIVNIGNPTNEA 572
>sp|P77398|ARNA_ECOLI Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain K12) GN=arnA PE=1 SV=1
Length = 660
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI----GSDAISRFLNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|B1IXT2|ARNA_ECOLC Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=arnA PE=3 SV=1
Length = 660
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI----GSDAISRFLNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|B1X8W8|ARNA_ECODH Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain K12 / DH10B) GN=arnA PE=3 SV=1
Length = 660
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI----GSDAISRFLNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|C4ZU97|ARNA_ECOBW Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=arnA PE=3 SV=1
Length = 660
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI----GSDAISRFLNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|B6I7J8|ARNA_ECOSE Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
(strain SE11) GN=arnA PE=3 SV=1
Length = 660
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI----GSDAISRFLNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
>sp|B7M5T7|ARNA_ECO8A Bifunctional polymyxin resistance protein ArnA OS=Escherichia coli
O8 (strain IAI1) GN=arnA PE=3 SV=1
Length = 660
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 129/279 (46%), Gaps = 38/279 (13%)
Query: 80 QSKRRILITGGAGFVGSHLVDKLMLMGH-EVTVVDNFFTGRKENVEHWFGHPNFEIIHQD 138
+ + R+LI G GF+G+HL ++L+ H EV +D + + + HP+F + D
Sbjct: 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDI----GSDAISRFLNHPHFHFVEGD 368
Query: 139 I-VTPLFVE-----VDEIYHLASPASPPHYMFNPVKTIKTNTIGTINMLGLAKRVGAKIL 192
I + ++E D + L + A+P Y NP++ + + + ++ + +I+
Sbjct: 369 ISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII 428
Query: 193 FASTSEVYGDPEVHPQPETYWGH-VNPIG-PRACYDEAKRVAETLCYAYARHEDLSVRVA 250
F STSEVYG E + V P+ PR Y +K++ + + +AY E L +
Sbjct: 429 FPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLF 488
Query: 251 RIFNTYGPRM-HMNDGRVVSNFIIQALRNETITSDSSKSFTKFWDTLYIPHSFTQVYGLG 309
R FN GPR+ ++N R+ SS++ T+ L + S ++ G
Sbjct: 489 RPFNWMGPRLDNLNAARI----------------GSSRAITQLILNL-VEGSPIKLIDGG 531
Query: 310 NQTRSFQYVTDLVDGLIALMNSNYTLPVNLGNPTEHSIL 348
Q R F TD+ DG+ AL Y + N GN + I+
Sbjct: 532 KQKRCF---TDIRDGIEAL----YRIIENAGNRCDGEII 563
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140,278,500
Number of Sequences: 539616
Number of extensions: 6060466
Number of successful extensions: 17413
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 212
Number of HSP's that attempted gapping in prelim test: 16590
Number of HSP's gapped (non-prelim): 528
length of query: 360
length of database: 191,569,459
effective HSP length: 119
effective length of query: 241
effective length of database: 127,355,155
effective search space: 30692592355
effective search space used: 30692592355
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)